Citrus Sinensis ID: 000993
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1196 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LX30 | 1241 | Probable serine/threonine | yes | no | 0.974 | 0.939 | 0.666 | 0.0 | |
| Q9HGN1 | 1576 | Serine/threonine-protein | yes | no | 0.647 | 0.491 | 0.312 | 1e-83 | |
| Q550L8 | 1358 | Probable serine/threonine | yes | no | 0.576 | 0.508 | 0.275 | 1e-68 | |
| Q558U1 | 2258 | Probable serine/threonine | no | no | 0.576 | 0.305 | 0.275 | 2e-68 | |
| P15442 | 1659 | Serine/threonine-protein | yes | no | 0.493 | 0.355 | 0.302 | 1e-61 | |
| Q9QZ05 | 1648 | Eukaryotic translation in | yes | no | 0.552 | 0.401 | 0.299 | 2e-61 | |
| Q9P2K8 | 1649 | Eukaryotic translation in | yes | no | 0.548 | 0.397 | 0.287 | 2e-58 | |
| P19525 | 551 | Interferon-induced, doubl | no | no | 0.222 | 0.482 | 0.330 | 3e-36 | |
| Q63184 | 513 | Interferon-induced, doubl | yes | no | 0.249 | 0.580 | 0.311 | 2e-35 | |
| Q9Z1Z1 | 1108 | Eukaryotic translation in | no | no | 0.161 | 0.174 | 0.355 | 3e-32 |
| >sp|Q9LX30|GCN2_ARATH Probable serine/threonine-protein kinase GCN2 OS=Arabidopsis thaliana GN=GCN2 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 1627 bits (4212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 823/1234 (66%), Positives = 938/1234 (76%), Gaps = 68/1234 (5%)
Query: 19 QSKDHSSSTVDDNELLSEEITAL------------------------------------- 41
Q KDH S+ +DNELLSEEITAL
Sbjct: 20 QLKDHGSNADEDNELLSEEITALSAIFQEDCKVVSDSRSPPQIAIKLRPYSKDMGYEDTD 79
Query: 42 --------CLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVE 93
CLPGYPYKCPKLQITPE+GLT +DA+ LL LL+DQANSNAREGRVMIFNLVE
Sbjct: 80 ISAMLIVRCLPGYPYKCPKLQITPEQGLTTADAEKLLSLLEDQANSNAREGRVMIFNLVE 139
Query: 94 AAQEFLSEIVPLGQSNESVPGLVTESSSQSFEGSAVS-ASKSCSSKVPFVYGFIDLFSGC 152
AAQEFLSEI+P ESVP L S+Q E +S +KSCS PFVYGFIDLFSG
Sbjct: 140 AAQEFLSEIIPESHDEESVPCLTAHRSTQFIEQPMLSNIAKSCSGG-PFVYGFIDLFSGL 198
Query: 153 GESWHWGLGIDENRGVVPSVPSHASDGSNYEVMWRKIDKNVKPLMIPDANQGTALIPSAK 212
++ +W L DENRG+V SV SH D S ++ +K DKN+K + P AK
Sbjct: 199 EDARNWSLTPDENRGIVSSVQSHPLDTSR--ILHQKPDKNLKRFEDHAKEEVALPAPIAK 256
Query: 213 LDTVKEENEDDNRSISTTDSSTSPMEEWVENGI-KGENRDSLLQDHGSNNDGGDTEIDRL 271
L+TV+EEN DD S S ++ + VE+G+ + E ++S LQD + +D ++E + L
Sbjct: 257 LNTVQEENVDDTSISSFDSSKST---DDVESGLFQNEKKESNLQDDTAEDDSTNSESESL 313
Query: 272 ESFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLTDALPQIATELYNLGIFSERGRD 331
S+S SL QDQ Q +KDL++VHLLR+AC S G L DALPQI EL+ LGI SE D
Sbjct: 314 GSWSSDSLAQDQVPQISKKDLLMVHLLRVACTSRGPLADALPQITDELHELGILSEEVLD 373
Query: 332 LASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGH 391
LASK S FN+TF F+Q M S+ V QFW+P DS PN SLPSSRYLNDFEEL+PLG
Sbjct: 374 LASKSSPDFNRTFEHAFNQNMASTSVPQFWEPPSDSCEPNASLPSSRYLNDFEELKPLGQ 433
Query: 392 GGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFE 451
GGFGHVVLCKNKLDGR YAVKKIRLKDK +PVN RI+REVATLSRLQHQHVVRYYQAWFE
Sbjct: 434 GGFGHVVLCKNKLDGRQYAVKKIRLKDKEIPVNSRIVREVATLSRLQHQHVVRYYQAWFE 493
Query: 452 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE 511
TGV D + WGS T SS FS A S ++ Q+N LESTYLYIQMEYCPRTLRQVFE
Sbjct: 494 TGVVDPFAGANWGSKTAGSSMFSYSGAVSTEIPEQDNNLESTYLYIQMEYCPRTLRQVFE 553
Query: 512 SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL 571
SY+HFDK+ AWHL RQIVEGLAHIHGQGIIHRD TPNNIFFDARNDIKIGDFGLAKFLKL
Sbjct: 554 SYNHFDKDFAWHLIRQIVEGLAHIHGQGIIHRDFTPNNIFFDARNDIKIGDFGLAKFLKL 613
Query: 572 EQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHP 631
EQLDQD F TD G VD TGQ GTYFYTAPEIEQ WPKIDEKADMYSLG+VFFELWHP
Sbjct: 614 EQLDQDGGFSTDVAGSGVDSTGQAGTYFYTAPEIEQDWPKIDEKADMYSLGVVFFELWHP 673
Query: 632 FSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691
F TAMER ++L++LK KGELP WV +F EQ SLLRRLMSPSPSDRPSATELL+ A PP+
Sbjct: 674 FGTAMERHVILTNLKLKGELPLKWVNEFPEQASLLRRLMSPSPSDRPSATELLKHAFPPR 733
Query: 692 MEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMK-HHAGTLRLNRDNTSSIQYSDL 750
ME ELLDNILR+M +SED+S+YD+VVS IFDEE L+MK H + RL D+ S IQY+++
Sbjct: 734 MESELLDNILRIMQTSEDSSVYDRVVSVIFDEEVLEMKSHQSSRSRLCADD-SYIQYTEI 792
Query: 751 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELR 810
+TELRDYVV++TKE+FRQHCAKHLE+ PM LL DCPQF R TVKLLT+GGD+LEL +ELR
Sbjct: 793 NTELRDYVVEITKEVFRQHCAKHLEVIPMRLLSDCPQFSRKTVKLLTNGGDMLELCYELR 852
Query: 811 LPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTM 870
LPF+ W NQKSSFKRYEIS VYRRAIGHSPPN LQ DFDI+GG +LTEAEVLKV +
Sbjct: 853 LPFVHWISVNQKSSFKRYEISHVYRRAIGHSPPNPCLQADFDIVGGTLSLTEAEVLKVIV 912
Query: 871 DIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKW 930
DI T FH SCDIHLNHGDLL+AIWSWAGIKAEHR KVAELL+MMGSLRPQSSE K KW
Sbjct: 913 DITTHIFHRGSCDIHLNHGDLLDAIWSWAGIKAEHRRKVAELLSMMGSLRPQSSERKLKW 972
Query: 931 VVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDEL---- 986
V IRRQLLQEL L EAVVNRLQTV RFCG ADQALPRLRGAL AD+PTRKALDEL
Sbjct: 973 VFIRRQLLQELKLPEAVVNRLQTVASRFCGDADQALPRLRGALRADRPTRKALDELSNLL 1032
Query: 987 -YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLH 1045
YLR+WRIE++++ID LMPP ESYHRNLFFQVF KE T +G LLAVGGRYD+L+
Sbjct: 1033 TYLRVWRIEEHVHIDVLMPPTESYHRNLFFQVFLTKENSSGTSNDGVLLAVGGRYDWLVQ 1092
Query: 1046 RMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLV 1105
+ DRE+ + N P VG SLALETI QH P+D +P+RNE TSVLVCSRGGGGLLV
Sbjct: 1093 EVCDREH-----KMNLPGAVGVSLALETIFQHLPMDLRPIRNEVSTSVLVCSRGGGGLLV 1147
Query: 1106 ERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGA---QKGLVKVR 1162
+RMELVAELWE++IKA+FVP PDPSLTEQYEYA+EH+IKCLVI+T++G Q VKVR
Sbjct: 1148 QRMELVAELWEKSIKAEFVPTPDPSLTEQYEYANEHEIKCLVIITESGVAQNQIEFVKVR 1207
Query: 1163 HLDVKKEKEVQRESLVRFLLDAIASQFRNPSLWS 1196
HL++KKEK V RE LV+FLLDA+A QFRNPS+WS
Sbjct: 1208 HLELKKEKVVGREELVKFLLDAMAVQFRNPSVWS 1241
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Protein kinase that may be involved in the phosphorylation of the alpha subunit of eIF-2. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9HGN1|GCN2_SCHPO Serine/threonine-protein kinase gcn2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gcn2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 312 bits (800), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 290/928 (31%), Positives = 424/928 (45%), Gaps = 153/928 (16%)
Query: 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL--KDKSLPVNDRILREVATL 434
SRY DFEEL+ LG GGFG VV KN++DGR YAVKK+ L DK N RILREV TL
Sbjct: 550 SRYETDFEELEFLGRGGFGEVVKVKNRIDGRFYAVKKLVLLSDDKE---NSRILREVMTL 606
Query: 435 SRLQHQHVVRYYQAWFETGV----------------------ADFDGDSMWGSGTLASST 472
SRL H+HVVRYY AW ET DF S + L+S
Sbjct: 607 SRLHHEHVVRYYTAWVETEANDTVTEIISSDSESLSQSLNMAVDFRQSSSLPADKLSSLD 666
Query: 473 --FSNRAASSAD----------------------------------VTGQENKLESTYLY 496
F + SSAD V QEN L +T LY
Sbjct: 667 IHFEDDYNSSADEEDPEASDISFQYSNTSDKEGSSDKDSSIEEASSVKTQENGLNAT-LY 725
Query: 497 IQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 555
IQMEYC + +L+ + D + W LFRQI+E LA+IH +G++HRDL P NIF D
Sbjct: 726 IQMEYCEKLSLQDIIR--DKIPVDEMWRLFRQILEALAYIHSRGMMHRDLKPGNIFLDEN 783
Query: 556 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKID 613
++K+GDFGLA + Q + D + D T VGT Y APE+ + + D
Sbjct: 784 RNVKLGDFGLATENENYQDNNDKW--KNRQSADEDLTTGVGTALYVAPELLSRRNGVRYD 841
Query: 614 EKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSW--VAKFSEQESLLRRLMS 671
K DMYSLGI+ FE+ FST+MER ++ ++ PS ++ S + ++ L+
Sbjct: 842 AKVDMYSLGIILFEMCMTFSTSMERIRIIDTIRSPSISFPSTFPFSRASHEFKVIHCLLQ 901
Query: 672 PSPSDRPSATELLQ-DALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMKH 730
P+ RPS+ ELL+ +A+PP++ E + LR++ S+ +T Y K++ +F + + +H
Sbjct: 902 HDPTKRPSSQELLESEAIPPKVGEEFIQEGLRLL-SNPNTPYYLKLLKVLFGQ--VPDRH 958
Query: 731 HAGTLRLNRDNTSSI--QYSD------LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLL 782
T N S + + SD L +RD+VV+V FR+H AK E E L
Sbjct: 959 KDFTYDFNLSEESGVLSKVSDRGWDSLLACLVRDHVVKV----FRRHGAK--ERESHILF 1012
Query: 783 GDCPQFKRN--TVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGH 840
Q+ ++ +V LL G LL+L ++ LP+ R N K Y IS V+R A G
Sbjct: 1013 PKSSQYDKDQASVSLLDKNGTLLQLPYDTVLPYARNVARNAVEEEKTYLISDVFREAKGG 1072
Query: 841 SPPNRYLQGDFDIIGGASALT--EAEVLKVTMDIVTRFFH-AESCDIHLNHGDLLEAIWS 897
P + FDI + L +AE +K +++T ESC I +NH D+L +I
Sbjct: 1073 GRPKAIKEISFDITTNSDNLDWYDAETIKALDEVLTEIPSLTESC-ILINHADILSSILD 1131
Query: 898 WAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLR 957
+ + + R +L + S +R QL E + ++ L R
Sbjct: 1132 YLQVSKDKRRMATHILGQINQRLTLSQ--------VRNQLRIESLVPSTTLDDLSLFDFR 1183
Query: 958 FCGAADQALPRLRGALPADKP--TRKALDEL-----YLRIWRIEKNIYIDAL-MPPIESY 1009
++ +LR + P R AL+ + LR +I +Y L + E Y
Sbjct: 1184 --ENYEEGASKLRKIFGKEMPQKMRTALNYMERVVKLLRALKISHQLYFMPLCVYNFEFY 1241
Query: 1010 HRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASL 1069
L FQ ++ EK L+ GGRYD L+ R +D + A + + VG
Sbjct: 1242 DGGLMFQAINLAEK-------SELICAGGRYDKLV-RFFDPPLMRTARKKHV---VGICF 1290
Query: 1070 ALETII----------------QHYPVDFKPVRNEAG------TSVLVCSRGGGGLLVER 1107
ALE ++ +H P P G VLV S G +L E+
Sbjct: 1291 ALEKLVFSMLRYIRFHNSKQSSKHSP---SPTLKSVGPWAPRRVDVLVTSIGKDSIL-EK 1346
Query: 1108 MELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQ-KGLVKVRHLDV 1166
L+ ELW NI+A V SL E + I ++++ Q + VK R++
Sbjct: 1347 CSLLQELWALNIQADIVLRGASSLEEIVTHYRSEGINWVLVVRQKNTQMEHSVKARNILK 1406
Query: 1167 KKEKEVQRESLVRFLLDAIASQFRNPSL 1194
++ E++ + + +LL I + RN S+
Sbjct: 1407 NEDDEIRFDEVGMWLLGEINERKRNESM 1434
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Phosphorylates eIF-2. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q550L8|IFKB_DICDI Probable serine/threonine-protein kinase ifkB OS=Dictyostelium discoideum GN=ifkB PE=2 SV=1 | Back alignment and function description |
|---|
Score = 262 bits (669), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 222/806 (27%), Positives = 361/806 (44%), Gaps = 116/806 (14%)
Query: 470 SSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQI 528
S SN + S + ++ E+ LYIQMEYC + TL+ + ++ +E A+ L RQI
Sbjct: 338 SRVVSNNSKLSTSSSRKKPPKETHTLYIQMEYCSKKTLKTLIDNVGGIAEEEAFRLLRQI 397
Query: 529 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK----FLKLEQLDQDAAFPTDT 584
VEGL HIH Q IIHRDL P NIF D ++KIGDFGLA K + L+ + +
Sbjct: 398 VEGLNHIHSQQIIHRDLKPANIFIDNEQNVKIGDFGLATSGAPVSKSDDLNSSTSNAANN 457
Query: 585 GGVS-------------------VDGTGQVGTYFYTAPEI-EQGWPKIDEKADMYSLGIV 624
+S + TG VGT FY PEI E+ K DMYSLGI+
Sbjct: 458 INLSSSTNSTAQQTPMWDLNDENLSMTGGVGTPFYCCPEILEKNTKHYGTKVDMYSLGII 517
Query: 625 FFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 684
FFE+ F T MER +L DL+ + PP + + +Q ++R L+S P+ RPS +LL
Sbjct: 518 FFEMCFQFQTQMERSNILRDLRDNLKFPPGFESTKPDQTQIIRSLLSRDPTQRPSTKQLL 577
Query: 685 QDA-LPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMKHHAGTLRLNRDNTS 743
+ LP +ME ++L ++ + ++ S++ ++ +F L H + L N S
Sbjct: 578 ESGLLPSKMEDDILKEAIKTI-ANPTISLFSYLMEKLF---CLSNDEHIMSRYLYTSNPS 633
Query: 744 SIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKR-----NTVKLLTH 798
+ + R+ +++F H + + I+ L P N K L
Sbjct: 634 ---LTPMHLICREKTFSRLEKIFLNHGS--IRIDTPTLFPKNPTNSTHPGAANVAKFLDE 688
Query: 799 GGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGAS 858
G ++ L ++L +P+ R + + KRY S VYRR+ P + DFDIIG +
Sbjct: 689 SGTVVYLPYDLTIPWARHVVIHNIQQAKRYTFSKVYRRSQPGFSPKELYECDFDIIGPSK 748
Query: 859 A--LTEAEVLKVTMDIVTRF-----------------FHAESCDIHLNHGDLLEAIWSWA 899
+ +++AE L++ ++I+ F + + I +NH LL++I S
Sbjct: 749 SRHISDAETLRIIIEIMEEFKDELFGNNSGSNSGSGSGGSINYKIRINHYGLLDSILSEC 808
Query: 900 GIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFC 959
G++ V + +A + W+ W + Q L+E L+ ++V+ + T R
Sbjct: 809 GVEKRFFTVVYQTVAQL--------HWRLNWAQV-AQSLKEHGLSASIVSNISTY-FRQR 858
Query: 960 GAADQALPRLRGALPADKPTRKALDELY-----LRIWRIEKNIYIDALMPPIESYHRNLF 1014
G Q + +L L K + +L L++ I +D + Y+ L
Sbjct: 859 GELAQCVTQLESLLANHKEATTGISDLKILVRNLQMINIIPRFLLDLSLIHNHQYYEGLV 918
Query: 1015 FQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETI 1074
FQ + ++ + ++ GGRYD L+ + + N SGVG +LA E I
Sbjct: 919 FQAY-IERPTLSNPSRTEIIMSGGRYDKLIKSLHPNPSLS----NNIVSGVGVTLACEKI 973
Query: 1075 I-------QHYPVD-FKPV---RN-------------------------EAGTSVLVCSR 1098
+ QH + F RN ++ V VCS
Sbjct: 974 VNSVLNYRQHLLNNCFNTTYTRRNKDPPNSNNNPNNNNLNNNVSIFTKFQSHIEVFVCSL 1033
Query: 1099 GGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGL 1158
G LL E++++ ++LW IKA + S + Y E+ I +VIL + Q G
Sbjct: 1034 -GSSLLGEKLQVASQLWSAGIKADYSQTDYYSSEDIYSNCRENGIPWVVILREKAFQIGK 1092
Query: 1159 VKVRHLDVKKEKEVQRESLVRFLLDA 1184
+KV+ ++ ++E+ V R+ LV F L +
Sbjct: 1093 LKVKQIETRQERTVARKDLVDFFLKS 1118
|
Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q558U1|IFKA_DICDI Probable serine/threonine-protein kinase ifkA OS=Dictyostelium discoideum GN=ifkA PE=2 SV=1 | Back alignment and function description |
|---|
Score = 261 bits (667), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 222/806 (27%), Positives = 361/806 (44%), Gaps = 116/806 (14%)
Query: 470 SSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQI 528
S SN + S + ++ E+ LYIQMEYC + TL+ + ++ +E A+ L RQI
Sbjct: 1238 SRVVSNNSKLSTSSSRKKPPKETHTLYIQMEYCSKKTLKTLIDNVGGIAEEEAFRLLRQI 1297
Query: 529 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK----FLKLEQLDQDAAFPTDT 584
VEGL HIH Q IIHRDL P NIF D ++KIGDFGLA K + L+ + +
Sbjct: 1298 VEGLNHIHSQQIIHRDLKPANIFIDNEQNVKIGDFGLATSGAPVSKSDDLNSSTSNTANN 1357
Query: 585 GGVS-------------------VDGTGQVGTYFYTAPEI-EQGWPKIDEKADMYSLGIV 624
+S + TG VGT FY PEI E+ K DMYSLGI+
Sbjct: 1358 INLSSSTNSTAQQTPMWDLNDENLSMTGGVGTPFYCCPEILEKNTKHYGTKVDMYSLGII 1417
Query: 625 FFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 684
FFE+ F T MER +L DL+ + PP + + +Q ++R L+S P+ RPS +LL
Sbjct: 1418 FFEMCFQFQTQMERSNILRDLRDNLKFPPGFESTKPDQTQIIRSLLSRDPTQRPSTKQLL 1477
Query: 685 QDA-LPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMKHHAGTLRLNRDNTS 743
+ LP +ME ++L ++ + ++ S++ ++ +F L H + L N S
Sbjct: 1478 ESGLLPSKMEDDILKEAIKTI-ANPTISLFSYLMEKLF---CLSNDEHIMSRYLYTSNPS 1533
Query: 744 SIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKR-----NTVKLLTH 798
+ + R+ +++F H + + I+ L P N K L
Sbjct: 1534 ---LTPMHLICREKTFSRLEKIFLNHGS--IRIDTPTLFPKNPTNSTHPGAANVAKFLDE 1588
Query: 799 GGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGAS 858
G ++ L ++L +P+ R + + KRY S VYRR+ P + DFDIIG +
Sbjct: 1589 SGTVVYLPYDLTIPWARHVVIHNIQQAKRYTFSKVYRRSQPGFSPKELYECDFDIIGPSK 1648
Query: 859 A--LTEAEVLKVTMDIVTRF-----------------FHAESCDIHLNHGDLLEAIWSWA 899
+ +++AE L++ ++I+ F + + I +NH LL++I S
Sbjct: 1649 SRHISDAETLRIIIEIMEEFKDELFGNNSGSNSGSGSGGSINYKIRINHYGLLDSILSEC 1708
Query: 900 GIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFC 959
G++ V + +A + W+ W + Q L+E L+ ++V+ + T R
Sbjct: 1709 GVEKRFFTVVYQTVAQL--------HWRLNWAQV-AQSLKEHGLSASIVSNISTY-FRQR 1758
Query: 960 GAADQALPRLRGALPADKPTRKALDELY-----LRIWRIEKNIYIDALMPPIESYHRNLF 1014
G Q + +L L K + +L L++ I +D + Y+ L
Sbjct: 1759 GELAQCVTQLESLLANHKEATTGISDLKILVRNLQMINIIPRFLLDLSLIHNHQYYEGLV 1818
Query: 1015 FQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETI 1074
FQ + ++ + ++ GGRYD L+ + + N SGVG +LA E I
Sbjct: 1819 FQAY-IERPTLSNPSRTEIIMSGGRYDKLIKSLHPNPSLS----NNIVSGVGVTLACEKI 1873
Query: 1075 I-------QHYPVD-FKPV---RN-------------------------EAGTSVLVCSR 1098
+ QH + F RN ++ V VCS
Sbjct: 1874 VNSVLNYRQHLLNNCFNTTYTRRNKDPPNSNNNPNNNNLNNNVSIFTKFQSHIEVFVCSL 1933
Query: 1099 GGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGL 1158
G LL E++++ ++LW IKA + S + Y E+ I +VIL + Q G
Sbjct: 1934 -GSSLLGEKLQVASQLWSAGIKADYSQTDYYSSEDIYSNCRENGIPWVVILREKAFQIGK 1992
Query: 1159 VKVRHLDVKKEKEVQRESLVRFLLDA 1184
+KV+ ++ ++E+ V R+ LV F L +
Sbjct: 1993 LKVKQIETRQERTVARKDLVDFFLKS 2018
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Phosphorylates eIF2-alpha, from 1 to 7 hours after the onset of development or during the preaggregation state, resulting in a shift from polysomes to free ribosomes for bulk mRNA. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P15442|GCN2_YEAST Serine/threonine-protein kinase GCN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GCN2 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 239 bits (609), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 206/682 (30%), Positives = 335/682 (49%), Gaps = 92/682 (13%)
Query: 495 LYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
L+IQMEYC RTL + S + + ++ W LFRQI+E L++IH QGIIHRDL P NIF
Sbjct: 784 LFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI 843
Query: 553 DARNDIKIGDFGLAKFL--KLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610
D ++KIGDFGLAK + L+ L D+ + G S + T +GT Y A E+ G
Sbjct: 844 DESRNVKIGDFGLAKNVHRSLDILKLDSQ---NLPGSSDNLTSAIGTAMYVATEVLDGTG 900
Query: 611 KIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKG-ELPPSW-VAKFSEQESLLRR 668
+EK DMYSLGI+FFE+ +PFST MER +L L+ E PP + K ++ ++R
Sbjct: 901 HYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRL 960
Query: 669 LMSPSPSDRPSATELLQDA-LPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLD 727
L+ P+ RP A LL LP + + E++ L+ + S+ + +V S+F++
Sbjct: 961 LIDHDPNKRPGARTLLNSGWLPVKHQDEVIKEALKSL-SNPSSPWQQQVRESLFNQS--- 1016
Query: 728 MKHHAGTLRLNRDNT--SSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDC 785
++ T + DN+ +S ++++ LR + + ++FR+H P +
Sbjct: 1017 ---YSLTNDILFDNSVPTSTPFANI---LRSQMTEEVVKIFRKHGGIENNAPPR-IFPKA 1069
Query: 786 PQF-KRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHS--- 841
P + +N ++L GG +L+L ++L P R+ N K+Y + VYR HS
Sbjct: 1070 PIYGTQNVYEVLDKGGTVLQLQYDLTYPMARYLSKNPSLISKQYRMQHVYRPP-DHSRSS 1128
Query: 842 -PPNRYLQGDFDIIGGASA---LTEAEVLKVTMDIVTRF--FHAESCDIHLNHGDLLEAI 895
P ++ + DFDII +S+ +AE LK+ +I+T F F + LNH D+LE++
Sbjct: 1129 LEPRKFGEIDFDIISKSSSESGFYDAESLKIIDEILTVFPVFEKTNTFFILNHADILESV 1188
Query: 896 WSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVG 955
+++ I R V+ +L+ +G R + ++ +L +LN++ +N L+
Sbjct: 1189 FNFTNIDKAQRPLVSRMLSQVGFAR--------SFKEVKNELKAQLNISSTALNDLELFD 1240
Query: 956 LRF-CGAADQALPRLRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESY 1009
R AA + L +L P K +L + YL+ + +N+ I L ++
Sbjct: 1241 FRLDFEAAKKRLYKLMIDSPHLKKIEDSLSHISKVLSYLKPLEVARNVVISPLSNYNSAF 1300
Query: 1010 HRN--LFFQVFSVKEKYPATLVEGT---LLAVGGRYDYLLHRMWDREYVGYASRTNPPSG 1064
++ +F V+ +G+ ++A GGRYD L+ + R +S T
Sbjct: 1301 YKGGIMFHAVYD----------DGSSRNMIAAGGRYDTLIS-FFARPSGKKSSNTR--KA 1347
Query: 1065 VGASLALETII---QHY-------------------PVDFKPVRNEAGTSVLVCSRGGGG 1102
VG +LA ETI Q+Y VD+KP R VL+ S
Sbjct: 1348 VGFNLAWETIFGIAQNYFKLASGNRIKKRNRFLKDTAVDWKPSR----CDVLISSFSNSL 1403
Query: 1103 LLVERMELVAELWEENIKAQFV 1124
L + ++ LW++NIKA +
Sbjct: 1404 LDTIGVTILNTLWKQNIKADML 1425
|
Stimulates GCN4 translation in amino acid-starved cells by phosphorylating the alpha subunit of eIF-2 (SUI2) on 'Ser-52'. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9QZ05|E2AK4_MOUSE Eukaryotic translation initiation factor 2-alpha kinase 4 OS=Mus musculus GN=Eif2ak4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 238 bits (608), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 220/734 (29%), Positives = 354/734 (48%), Gaps = 73/734 (9%)
Query: 494 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
YLYIQMEYC + TLR + D W LFR+I++GLA+IH +G+IHRDL P NIF
Sbjct: 795 YLYIQMEYCEKSTLRDTIDQGLFRDTSRLWRLFREILDGLAYIHEKGMIHRDLKPVNIFL 854
Query: 553 DARNDIKIGDFGLAK-----FLKLEQLDQ--DAAFPTDTGGVSVDGTGQVGTYFYTAPEI 605
D+ + +KIGDFGLA + +Q DQ D +D G TG VGT Y +PE+
Sbjct: 855 DSDDHVKIGDFGLATDHLAFTAEGKQDDQAGDGVIKSDPSG---HLTGMVGTALYVSPEV 911
Query: 606 EQGWPK--IDEKADMYSLGIVFFEL-WHPFSTAMERQIVLSDLKQKGELPPSWVAKF--- 659
QG K ++K D++SLGI+FFE+ +HP TA ER VL+ L+ P + F
Sbjct: 912 -QGSTKSAYNQKVDLFSLGIIFFEMSYHPMVTASERIFVLNQLRDPTS--PKFPDDFDDG 968
Query: 660 --SEQESLLRRLMSPSPSDRPSATELLQDAL--PPQMEYELLDNILRMMHSSEDTSIYDK 715
++Q+S++ L++ P+ RP+A ELL+ L PPQME L +L ++ D Y
Sbjct: 969 EHTKQKSVISWLLNHDPAKRPTAMELLKSELLPPPQMEESELHEVLHHTLANIDGKAYRT 1028
Query: 716 VVSSIFDEE---TLDMKHHAGTLRLN-RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCA 771
++S IF + +D + + L+ N T+ IQ +T +R +F++H A
Sbjct: 1029 MMSQIFCQHISPAIDYTYDSDILKGNFLIRTAKIQQLVCETIVR---------VFKRHGA 1079
Query: 772 KHLEIEPMYLLGDCPQFKRNTVKL-LTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEI 830
L P+ L + ++ N L + H G L+ L +LR+PF R+ N + KRY I
Sbjct: 1080 VQL-CTPLLLPRNRQIYEHNEAALFMDHSGMLVMLPFDLRVPFARYVARNNILNLKRYCI 1138
Query: 831 SSVYR-RAIGHSPPNRYLQGDFDIIGGA--SALTEAEVLKVTMDIVTRF--FHAESCDIH 885
V+R R + P L+ FDI+ S+L AE + +I+ F + I+
Sbjct: 1139 ERVFRPRKLDRFHPKELLECAFDIVTSTTNSSLPTAETIYTIYEIIQEFPALQERNYSIY 1198
Query: 886 LNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAE 945
LNH LL+AI GI + +V +L + + E ++K+ L+L+
Sbjct: 1199 LNHTMLLKAILLHCGIPEDKLSQVYVILYDAVTEKLTRREVEAKFC--------NLSLSS 1250
Query: 946 AVVNRL-----QTVGLRFCGAADQALPRLR-GALPADKPTRKALDELY--LRIWRIEKNI 997
+ RL Q L+ +L + + G K + K L+++ L+ ++ +
Sbjct: 1251 NSLCRLYKFIEQKGDLQDLTPTINSLIKQKTGVAQLVKYSLKDLEDVVGLLKKLGVKLQV 1310
Query: 998 YIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYAS 1057
I+ + H + FQ + ++ + E +LA GGRYD L+ + + VG
Sbjct: 1311 SINLGLVYKVQQHTGIIFQFLAFSKRRQRVVPE--ILAAGGRYDLLIPKFRGPQTVGPV- 1367
Query: 1058 RTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEE 1117
P+ VG S+A++ I +PV + +LV S G + + L +LW
Sbjct: 1368 ----PTAVGVSIAIDKIFAAVLNMEEPV-TVSSCDLLVVSVGQMS-MSRAINLTQKLWTA 1421
Query: 1118 NIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESL 1177
I A+ + S E EY H+I + +++D + VKV+ + KE++ ++ L
Sbjct: 1422 GITAEIMYDWSQSQEELQEYCRHHEITYVALVSD--KEGSHVKVKSFE--KERQTEKRVL 1477
Query: 1178 VRFLLDAIASQFRN 1191
L+D + + R
Sbjct: 1478 ESDLVDHVMQKLRT 1491
|
Can phosphorylate the alpha subunit of EIF2 and may mediate translational control. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9P2K8|E2AK4_HUMAN Eukaryotic translation initiation factor 2-alpha kinase 4 OS=Homo sapiens GN=EIF2AK4 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 228 bits (581), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 212/738 (28%), Positives = 348/738 (47%), Gaps = 82/738 (11%)
Query: 494 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
YLYIQMEYC + TLR + + D W LFR+I++GLA+IH +G+IHRDL P NIF
Sbjct: 797 YLYIQMEYCEKSTLRDTIDQGLYRDTVRLWRLFREILDGLAYIHEKGMIHRDLKPVNIFL 856
Query: 553 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-----------TGQVGTYFYT 601
D+ + +KIGDFGLA AF D+ G TG VGT Y
Sbjct: 857 DSDDHVKIGDFGLAT--------DHLAFSADSKQDDQTGDLIKSDPSGHLTGMVGTALYV 908
Query: 602 APEIEQGWPK--IDEKADMYSLGIVFFEL-WHPFSTAMERQIVLSDLKQKGELPPSWVAK 658
+PE+ QG K ++K D++SLGI+FFE+ +HP TA ER VL+ L+ P +
Sbjct: 909 SPEV-QGSTKSAYNQKVDLFSLGIIFFEMSYHPMVTASERIFVLNQLRDPTS--PKFPED 965
Query: 659 F-----SEQESLLRRLMSPSPSDRPSATELLQDAL--PPQMEYELLDNILRMMHSSEDTS 711
F ++Q+S++ L++ P+ RP+ATELL+ L PPQME L +L ++ D
Sbjct: 966 FDDGEHAKQKSVISWLLNHDPAKRPTATELLKSELLPPPQMEESELHEVLHHTLTNVDGK 1025
Query: 712 IYDKVVSSIFDEE---TLDMKHHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQ 768
Y +++ IF + +D + + L+ N +S +++ +V + +F++
Sbjct: 1026 AYRTMMAQIFSQRISPAIDYTYDSDILKGN--------FSIRTAKMQQHVCETIIRIFKR 1077
Query: 769 HCAKHLEIEPMYLLGDCPQFKRNTVKL-LTHGGDLLELSHELRLPFIRWAISNQKSSFKR 827
H A L P+ L + ++ N L + H G L+ L +LR+PF R+ N + KR
Sbjct: 1078 HGAVQL-CTPLLLPRNRQIYEHNEAALFMDHSGMLVMLPFDLRIPFARYVARNNILNLKR 1136
Query: 828 YEISSVYR-RAIGHSPPNRYLQGDFDIIGGA--SALTEAEVLKVTMDIVTRF--FHAESC 882
Y I V+R R + P L+ FDI+ S L AE++ +I+ F +
Sbjct: 1137 YCIERVFRPRKLDRFHPKELLECAFDIVTSTTNSFLPTAEIIYTIYEIIQEFPALQERNY 1196
Query: 883 DIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELN 942
I+LNH LL+AI GI + +V +L + + E ++K+ L+
Sbjct: 1197 SIYLNHTMLLKAILLHCGIPEDKLSQVYIILYDAVTEKLTRREVEAKFC--------NLS 1248
Query: 943 LAEAVVNRLQTVGLRFCGAADQALPRLR-------GALPADKPTRKALDELY--LRIWRI 993
L+ + RL + G +P + G K K L+E+ L+ I
Sbjct: 1249 LSSNSLCRLYKF-IEQKGDLQDLMPTINSLIKQKTGIAQLVKYGLKDLEEVVGLLKKLGI 1307
Query: 994 EKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYV 1053
+ + I+ + H + FQ + ++ + E +LA GGRYD L+ + + +
Sbjct: 1308 KLQVLINLGLVYKVQQHNGIIFQFVAFIKRRQRAVPE--ILAAGGRYDLLIPQFRGPQAL 1365
Query: 1054 GYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAE 1113
G P+ +G S+A++ I ++ + + +LV S G + + L +
Sbjct: 1366 GPV-----PTAIGVSIAIDKISAAV-LNMEESVTISSCDLLVVSVGQMS-MSRAINLTQK 1418
Query: 1114 LWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQ 1173
LW I A+ + S E EY H+I + +++D VKV+ + KE++ +
Sbjct: 1419 LWTAGITAEIMYDWSQSQEELQEYCRHHEITYVALVSDKEGSH--VKVKSFE--KERQTE 1474
Query: 1174 RESLVRFLLDAIASQFRN 1191
+ L L+D + + R
Sbjct: 1475 KRVLETELVDHVLQKLRT 1492
|
Can phosphorylate the alpha subunit of EIF2 and may mediate translational control. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P19525|E2AK2_HUMAN Interferon-induced, double-stranded RNA-activated protein kinase OS=Homo sapiens GN=EIF2AK2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 49/315 (15%)
Query: 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL 437
R+ DF+E++ +G GGFG V K+++DG+ Y +K+++ N++ REV L++L
Sbjct: 262 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN------NEKAEREVKALAKL 315
Query: 438 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
H ++V Y W FD D +L SS + + ++ ++ ++ L+I
Sbjct: 316 DHVNIVHYNGCW-----DGFDYDPETSDDSLESSDYDPENSKNS------SRSKTKCLFI 364
Query: 498 QMEYCPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 554
QME+C + TL Q E + DK LA LF QI +G+ +IH + +IHRDL P+NIF
Sbjct: 365 QMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVD 424
Query: 555 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG--TGQVGTYFYTAPE--IEQGWP 610
+KIGDFGL LK DG T GT Y +PE Q +
Sbjct: 425 TKQVKIGDFGLVTSLK------------------NDGKRTRSKGTLRYMSPEQISSQDYG 466
Query: 611 KIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 670
K + D+Y+LG++ EL H TA E +DL+ G + + K +++LL++L+
Sbjct: 467 K---EVDLYALGLILAELLHVCDTAFETSKFFTDLRD-GIISDIFDKK---EKTLLQKLL 519
Query: 671 SPSPSDRPSATELLQ 685
S P DRP+ +E+L+
Sbjct: 520 SKKPEDRPNTSEILR 534
|
Following activation by double-stranded RNA in the presence of ATP, the kinase becomes autophosphorylated and can catalyze the phosphorylation of the translation initiation factor EIF2S1, which leads to an inhibition of the initiation of protein synthesis. Double-stranded RNA is generated during the course of a viral infection. In addition to serine/threonine-protein kinase activity, also has tyrosine-protein kinase activity: phosphorylates CDK1 upon DNA damage. CDK1 phosphorylation triggers CDK1 polyubiquitination and subsequent proteolysis, thus leading to G2 arrest. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 0 EC: . EC: 2 |
| >sp|Q63184|E2AK2_RAT Interferon-induced, double-stranded RNA-activated protein kinase OS=Rattus norvegicus GN=Eif2ak2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 170/347 (48%), Gaps = 49/347 (14%)
Query: 342 KTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCK 401
+ F +F + R S PS D +L R+ DFE+++ +G GGFG V K
Sbjct: 196 RDFEDIFMNGLREKRKSGVKVPSDDVLRNKYTL-DDRFSKDFEDIEEIGSGGFGQVFKAK 254
Query: 402 NKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461
+++DG+ YA+K+I K + REV L+ L H ++V+Y W E D+D ++
Sbjct: 255 HRIDGKTYAIKRITYNTK------KAKREVQALAELNHANIVQYRVCW-EGEDYDYDPEN 307
Query: 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHF--DK 518
G ++ ++ L+IQME+C + TL+Q E + DK
Sbjct: 308 --------------------STNGDTSRYKTRCLFIQMEFCDKGTLQQWLEKRNRSQEDK 347
Query: 519 ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 578
L LF QIV G+ +IH +G+IHRDL P NIF IKIGDFGLA L ++
Sbjct: 348 ALVLELFEQIVTGVDYIHSKGLIHRDLKPGNIFLVDEKHIKIGDFGLATAL------END 401
Query: 579 AFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMER 638
P T GT Y +PE + + ++ D+++LG++ EL H T E+
Sbjct: 402 GNPR---------TKYTGTPQYMSPEQKSSLVEYGKEVDIFALGLILAELLHICKTDSEK 452
Query: 639 QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685
I L + G ++++SLL++L+S P +RP+ +E+L+
Sbjct: 453 -IEFFQLLRNGIFSDDIFD--NKEKSLLQKLLSSKPRERPNTSEILK 496
|
Following activation by double-stranded RNA in the presence of ATP, the kinase becomes autophosphorylated and can catalyze the phosphorylation of the translation initiation factor EIF2S1, which leads to an inhibition of the initiation of protein synthesis. Double-stranded RNA is generated during the course of a viral infection. In addition to serine/threonine-protein kinase activity, also has tyrosine-protein kinase activity: phosphorylates CDK1 upon DNA damage. CDK1 phosphorylation triggers CDK1 polyubiquitination and subsequent proteolysis, thus leading to G2 arrest. Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 0 EC: . EC: 2 |
| >sp|Q9Z1Z1|E2AK3_RAT Eukaryotic translation initiation factor 2-alpha kinase 3 OS=Rattus norvegicus GN=Eif2ak3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 120/208 (57%), Gaps = 15/208 (7%)
Query: 494 YLYIQMEYCPR-------TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 546
YLYIQM+ C + R E +H + H+F QI E + +H +G++HRDL
Sbjct: 875 YLYIQMQLCRKENLKDWMNRRCSMEDREH---RVCLHIFLQIAEAVQFLHSKGLMHRDLK 931
Query: 547 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 606
P+NIFF + +K+GDFGL + ++ +Q P TGQVGT Y +PE
Sbjct: 932 PSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATH---TGQVGTKLYMSPEQI 988
Query: 607 QGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLL 666
G K D++SLG++ FEL +PFST MER L+D++ + PP + K+ ++ ++
Sbjct: 989 HG-NNYSHKVDIFSLGLILFELLYPFSTQMERVRTLTDVRNL-KFPPLFTQKYPQEHMMV 1046
Query: 667 RRLMSPSPSDRPSATELLQDALPPQMEY 694
+ ++SPSP +RP AT+++++A+ +E+
Sbjct: 1047 QDMLSPSPMERPEATDIIENAVFENLEF 1074
|
Phosphorylates the alpha subunit of eukaryotic translation-initiation factor 2 (EIF2), leading to its inactivation and thus to a rapid reduction of translational initiation and repression of global protein synthesis. Serves as a critical effector of unfolded protein response (UPR)-induced G1 growth arrest due to the loss of cyclin-D1 (CCND1). Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1196 | ||||||
| 359478149 | 1244 | PREDICTED: probable serine/threonine-pro | 0.976 | 0.938 | 0.729 | 0.0 | |
| 255585505 | 1162 | eif2alpha kinase, putative [Ricinus comm | 0.921 | 0.948 | 0.714 | 0.0 | |
| 356544520 | 1222 | PREDICTED: probable serine/threonine-pro | 0.959 | 0.939 | 0.678 | 0.0 | |
| 30694992 | 1241 | non-specific serine/threonine protein ki | 0.974 | 0.939 | 0.666 | 0.0 | |
| 297817238 | 1242 | kinase family protein [Arabidopsis lyrat | 0.974 | 0.938 | 0.667 | 0.0 | |
| 334186129 | 1265 | non-specific serine/threonine protein ki | 0.974 | 0.921 | 0.681 | 0.0 | |
| 449446446 | 1298 | PREDICTED: probable serine/threonine-pro | 0.967 | 0.891 | 0.611 | 0.0 | |
| 7801691 | 1271 | protein kinase like [Arabidopsis thalian | 0.973 | 0.915 | 0.649 | 0.0 | |
| 297743778 | 859 | unnamed protein product [Vitis vinifera] | 0.655 | 0.912 | 0.790 | 0.0 | |
| 357164402 | 1246 | PREDICTED: probable serine/threonine-pro | 0.968 | 0.929 | 0.503 | 0.0 |
| >gi|359478149|ref|XP_002264839.2| PREDICTED: probable serine/threonine-protein kinase GCN2-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1723 bits (4463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 867/1188 (72%), Positives = 972/1188 (81%), Gaps = 20/1188 (1%)
Query: 21 KDHSSSTVDDNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSN 80
+ +S T DN +S + CLPGYPYKCPKLQITPEKGL+K DADNLL LLQDQAN+N
Sbjct: 65 RPYSKDTGYDNLDVSALLLVRCLPGYPYKCPKLQITPEKGLSKGDADNLLSLLQDQANAN 124
Query: 81 AREGRVMIFNLVEAAQEFLSEIVPLGQSNESVPGLVTESSSQSFEGSAVSASKSCSSKVP 140
AREGRVM+FNLVEAAQEFLSEIVP+GQS+ +VP T++SSQ F +K CSSK P
Sbjct: 125 AREGRVMVFNLVEAAQEFLSEIVPVGQSHAAVPCSNTDNSSQLFLQDVSICNKGCSSKGP 184
Query: 141 FVYGFIDLFSGCGESWHWGLGIDENRGVVPSVPSHASDGSN--YEVMWRKIDKNVKPLMI 198
VYGFIDLFSG G+SWHWG +DE R + S +HASDGS Y + +K+DKN KPL +
Sbjct: 185 MVYGFIDLFSGTGDSWHWGFEMDETR-ISSSSHAHASDGSKHGYGIEGKKLDKNTKPLTM 243
Query: 199 PDANQGTALIPSAKLDTVKEENEDDNRSISTTDSSTSPMEEWVENGI--KGENRDSLLQD 256
+ NQG P+ KLD ++EE EDD+ SIS SS S EE N K EN+D ++
Sbjct: 244 QNTNQGQLPSPTVKLDALEEEIEDDSESISFFGSSRSLREELAGNVTTEKQENKDFSPEE 303
Query: 257 HGSNNDGGDTEIDRLESFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLTDALPQIA 316
+ D GD E D ES S+ S+ DQ S +EKDL++VHLLRLAC S G L DALP+I
Sbjct: 304 DTAEEDDGDIESDASESLSYVSVIHDQTSHTVEKDLLMVHLLRLACASKGGLADALPEIT 363
Query: 317 TELYNLGIFSERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPS 376
TELYNLGIFSE RDLA+KPSS FNKTF+ VF Q +VSSR+SQFWKP D G + SLPS
Sbjct: 364 TELYNLGIFSEPVRDLATKPSSFFNKTFDHVFRQHVVSSRISQFWKPPSDFGGQSTSLPS 423
Query: 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR 436
SRYLNDFEELQPLGHGGFGHVVLCKNKLDGR YAVKKIRLKDKS PV DRILREVATLSR
Sbjct: 424 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRQYAVKKIRLKDKSPPVYDRILREVATLSR 483
Query: 437 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 496
LQHQHVVRYYQAWFETGV+ GD+ WGS T ASS+FS + ASSADV ENKLESTYLY
Sbjct: 484 LQHQHVVRYYQAWFETGVSGSFGDTTWGSMTPASSSFSYKGASSADVNVHENKLESTYLY 543
Query: 497 IQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 556
IQMEYCPRTLRQ+FESY HFDKELAWHLFRQIVEGL HIHGQGIIHRDLTPNNIFFDARN
Sbjct: 544 IQMEYCPRTLRQMFESYSHFDKELAWHLFRQIVEGLVHIHGQGIIHRDLTPNNIFFDARN 603
Query: 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616
DIKIGDFGLAKFLKLEQLDQD P DT GVSVD TGQVGTYFYTAPEIEQGWPKIDEKA
Sbjct: 604 DIKIGDFGLAKFLKLEQLDQDPGVPPDTTGVSVDRTGQVGTYFYTAPEIEQGWPKIDEKA 663
Query: 617 DMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 676
DMYSLG+VFFELWHPF TAMER IVL+DLKQKGELP SWVA+F EQ SLL+ LMSPSPSD
Sbjct: 664 DMYSLGVVFFELWHPFGTAMERSIVLNDLKQKGELPSSWVAEFPEQASLLQHLMSPSPSD 723
Query: 677 RPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMKH--HAGT 734
RP ATELLQ A PP+MEYELLDNILR M +SEDT +YDKVV++IFD+E L K+ H G
Sbjct: 724 RPFATELLQHAFPPRMEYELLDNILRTMQTSEDTGVYDKVVNAIFDKEMLSAKNLQHFGR 783
Query: 735 LRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVK 794
LRL D+TSSIQY+D DTELRD+V +VT+E+FR HCAK LE+ P+ LL DCPQ RNTVK
Sbjct: 784 LRLVGDDTSSIQYTDSDTELRDHVSEVTREVFRHHCAKRLEVVPIRLLDDCPQTIRNTVK 843
Query: 795 LLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRYLQGDFDII 854
LLTHGGD++EL HELRLPF+ W I+NQKSSFKRYE+S VYRRAIGHS PNRYLQGDFD+I
Sbjct: 844 LLTHGGDMIELCHELRLPFVNWVITNQKSSFKRYEVSYVYRRAIGHSAPNRYLQGDFDMI 903
Query: 855 GGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLA 914
GGA+ALTEAEV+KV MDIVT FFH+ SC IHLNHGDLLEAIWSW GIKAEHR+KVAELL+
Sbjct: 904 GGATALTEAEVIKVAMDIVTHFFHSNSCGIHLNHGDLLEAIWSWIGIKAEHRQKVAELLS 963
Query: 915 MMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALP 974
MM SLRPQS E K KWVVIRRQL QELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALP
Sbjct: 964 MMSSLRPQSPERKLKWVVIRRQLQQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALP 1023
Query: 975 ADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLV 1029
ADKPTRKALDEL YLR+WRIEK+++IDALMPP ESYHR+LFFQ++ +KE P +L
Sbjct: 1024 ADKPTRKALDELADLFSYLRVWRIEKHVFIDALMPPTESYHRDLFFQIYLMKENNPGSLK 1083
Query: 1030 EGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEA 1089
EG LLA+GGRYD LL M +AS++NPP VG SLALET+IQH +D +P RNE
Sbjct: 1084 EGVLLAIGGRYDQLLREMC------FASKSNPPGAVGVSLALETVIQHSSMDIRPFRNEV 1137
Query: 1090 GTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVIL 1149
G +VLVCSRGGGGLL ERMELVA LWEENIKA+FVPV DPSLTEQYEYA+EHDIKCLVI+
Sbjct: 1138 GINVLVCSRGGGGLLEERMELVAGLWEENIKAEFVPVSDPSLTEQYEYANEHDIKCLVII 1197
Query: 1150 TDTGAQ-KGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQFRNPSLWS 1196
TDTG VKVRHL++KKEKEV+RE+LV+F L +IA+QFRN S+W+
Sbjct: 1198 TDTGVSPTDFVKVRHLELKKEKEVERENLVKF-LHSIATQFRNLSIWN 1244
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255585505|ref|XP_002533444.1| eif2alpha kinase, putative [Ricinus communis] gi|223526706|gb|EEF28940.1| eif2alpha kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1642 bits (4252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 830/1162 (71%), Positives = 922/1162 (79%), Gaps = 60/1162 (5%)
Query: 15 KGRAQSKDHSSSTVDDNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQ 74
K R SKD +D + LLS CLPGYP+KCPKLQITPE GLTK+D DNLL LL
Sbjct: 25 KLRPYSKDMGYEDLDVSALLS----VRCLPGYPFKCPKLQITPENGLTKTDVDNLLSLLH 80
Query: 75 DQANSNAREGRVMIFNLVEAAQEFLSEIVPLGQSNESVPGLVTESSSQSFEGSAVSASKS 134
DQANSNAREGRVMIFNLVEAAQEFLSEI+P+ + E+V +S Q F+G AVS++K
Sbjct: 81 DQANSNAREGRVMIFNLVEAAQEFLSEIIPVNPTPETVLCSARDSVGQLFQGIAVSSNKI 140
Query: 135 CSSKVPFVYGFIDLFSGCGESWHWGLGIDENRGVVPSVPSHASDGSN--YEVMWRKIDKN 192
CSS PFVYGFIDLFSG GESW WGL +D+NRGV S+ SH DGS YEV +K+DK
Sbjct: 141 CSSSWPFVYGFIDLFSGSGESWDWGLAVDDNRGVNSSIKSHLLDGSKAGYEVQEKKLDKV 200
Query: 193 VKPLMIPDANQGTALIPSAKLDTVKEENEDDNRSISTTDSSTSPMEEWVENGIKGENRDS 252
KPLM+ D QG + P AKLDT++EE E+DN+SIST DSS S EE VEN + G+ S
Sbjct: 201 TKPLMLQDPKQGPLVSPGAKLDTLEEETEEDNKSIST-DSSRSLTEESVENEMGGKEVTS 259
Query: 253 LLQDHGSNNDGGDTEIDRLESFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLTDAL 312
++ G+ +D + E + E S ASLG + ++ IEKDLI+VH+LRLAC S G DAL
Sbjct: 260 T-EESGAEDDDAELESEPWELPSSASLGHHEVTRTIEKDLIMVHMLRLACASKGVSADAL 318
Query: 313 PQIATELYNLGIFSERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNM 372
PQI EL NLG+FSE DLA KPSS FN+TF+ VFHQ MVSS+VSQFWKP+ D G N
Sbjct: 319 PQITRELCNLGVFSEGACDLACKPSSIFNETFDHVFHQHMVSSKVSQFWKPTSDLGGSNT 378
Query: 373 SLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVA 432
SLP+SRYLNDFEELQPLGHGGFGHVVLCKNKLDGR YAVKKIRLKDKSLPVNDRILREVA
Sbjct: 379 SLPNSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRQYAVKKIRLKDKSLPVNDRILREVA 438
Query: 433 TLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASS---------ADV 483
TLSRLQH HVVRYYQAWFETGV GD+ W T ASST S ASS AD+
Sbjct: 439 TLSRLQHLHVVRYYQAWFETGVVGSFGDTSWDYSTAASSTISYHGASSTISYHGASSADI 498
Query: 484 TGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543
GQ+ KL+STYLYIQMEYCPRTLRQVFESY HFDKEL WH FRQIVEGLAHIHGQGIIHR
Sbjct: 499 -GQDVKLDSTYLYIQMEYCPRTLRQVFESYKHFDKELVWHQFRQIVEGLAHIHGQGIIHR 557
Query: 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 603
DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD DA PTDT GVS DGTGQVGTYFYTAP
Sbjct: 558 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDHDATLPTDTSGVSADGTGQVGTYFYTAP 617
Query: 604 EIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQE 663
EIEQGWPKIDEK DMYSLG+VFFELWHPF TAMER I+LSDLKQKGELP SWVA+F EQ
Sbjct: 618 EIEQGWPKIDEKVDMYSLGVVFFELWHPFGTAMERHIILSDLKQKGELPSSWVAQFPEQA 677
Query: 664 SLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDE 723
SLLR+LMSPSPSDRPSAT+LL++A PP+ME ELLD ILR M +SED S+YDKVV+SIFDE
Sbjct: 678 SLLRQLMSPSPSDRPSATDLLKNAFPPRMESELLDKILRTMQTSEDRSVYDKVVNSIFDE 737
Query: 724 ETLDMK---HHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMY 780
E L MK H G L + D++S IQY+DLDTELRDYVV+ +EMF++HCAKHLEI P+
Sbjct: 738 EILSMKSHHQHVGLLGMGGDDSSCIQYADLDTELRDYVVEAAREMFKRHCAKHLEIIPVR 797
Query: 781 LLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGH 840
LL DCPQF R TVKLLTHGGDLLEL HELRLPF+ W I+NQK SFKRYE+SSVYRRAIGH
Sbjct: 798 LLDDCPQFSRKTVKLLTHGGDLLELCHELRLPFVSWLIANQKFSFKRYEVSSVYRRAIGH 857
Query: 841 SPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAG 900
SPPNRYLQGDFDIIGGASALTEAEV+KVTMDIVTRFF ++SCDIHLNHGDLL+AIWSW G
Sbjct: 858 SPPNRYLQGDFDIIGGASALTEAEVIKVTMDIVTRFFLSDSCDIHLNHGDLLDAIWSWVG 917
Query: 901 IKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCG 960
IK EHR+KVAELL+MMGSLRPQSSE KSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCG
Sbjct: 918 IKPEHRQKVAELLSMMGSLRPQSSERKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCG 977
Query: 961 AADQALPRLRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFF 1015
A DQALPRLRGALPAD PTRKALDEL YL++W+IE ++YI+ALMPP E+YHR LFF
Sbjct: 978 AVDQALPRLRGALPADSPTRKALDELSDLVIYLKVWKIEHHVYINALMPPTENYHRGLFF 1037
Query: 1016 QVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETII 1075
Q YP + +T+PP VG SLALETII
Sbjct: 1038 QFL-----YP-----------------------------FVQKTHPPGAVGTSLALETII 1063
Query: 1076 QHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQY 1135
QH PVDF+P RNE T++LVCSRGGGGLLVERM LVAELWE NIKA+FVP+ DPSLTEQY
Sbjct: 1064 QHSPVDFRPTRNETSTNILVCSRGGGGLLVERMGLVAELWEANIKAEFVPISDPSLTEQY 1123
Query: 1136 EYASEHDIKCLVILTDTGAQKG 1157
EYASEHDI+CLVI+TD G G
Sbjct: 1124 EYASEHDIRCLVIITDAGESNG 1145
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356544520|ref|XP_003540698.1| PREDICTED: probable serine/threonine-protein kinase GCN2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1627 bits (4212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 834/1230 (67%), Positives = 950/1230 (77%), Gaps = 82/1230 (6%)
Query: 18 AQSKDHSSS-TVDDNELLSEEITALC---------------------------------- 42
QSKDH+S DD + LSEEITALC
Sbjct: 22 TQSKDHASQFGSDDYDQLSEEITALCAIFEEDCKVLPGSPPRVVIKLSRPYSKDMGYEDL 81
Query: 43 ----------LPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLV 92
LPGYP+KCPKLQITPEKGL+++DA LL LLQDQA NAREGRVMI+NLV
Sbjct: 82 DVSAVLAVRCLPGYPFKCPKLQITPEKGLSEADAKKLLSLLQDQATLNAREGRVMIYNLV 141
Query: 93 EAAQEFLSEIVPLGQSNES-VPGLVTESSSQSFEGSAVSASKSCSSKVPFVYGFIDLFSG 151
EAAQEFLS I P+ ++N+S + + ES+ + F S +K S FVYGFIDLFSG
Sbjct: 142 EAAQEFLSGIEPIAKTNDSKLLHSMVESNEELFPKDMTSVNKKGS----FVYGFIDLFSG 197
Query: 152 CGESWHWGLGIDENRGVVPSVPSHASDGSNYEVMWRKIDKNVKPLMIPDANQGTALIPSA 211
CGE+W W G+DE S+ D S + + +K D PL++ + +P A
Sbjct: 198 CGETWSWSFGMDETAVKSSSLSPSKLDAS--KPLEKKSDSKETPLIMQE-------LP-A 247
Query: 212 KLDTVKEENEDDNRSISTTDSSTSPMEEWVENGIKGENRDSLLQDHGSNNDGGDTEIDRL 271
KLDTV E +ED N S+S T SS S +E++V N +GE ++ ++ + ++ G E +
Sbjct: 248 KLDTVGEVSEDSNNSLSLTSSSRSLVEDFVGNKNEGEKEYFIVDEYTTEHNEGINESESS 307
Query: 272 ESFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLTDALPQIATELYNLGIFSERGRD 331
ES S SL Q SQ +EKDLI+VH+LRL C S G+ D LPQ+ TEL NLGI S+ RD
Sbjct: 308 ESLSSESLPHHQPSQTVEKDLIMVHMLRLVCASKGTFADCLPQVVTELCNLGIISDSARD 367
Query: 332 LASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGH 391
+AS+P S FNKTFN+VF + + SSR+SQFWKP D G N SRYLNDFEEL+PLGH
Sbjct: 368 MASEPPSIFNKTFNRVFQKHLASSRISQFWKP--DIGGSNTVPHGSRYLNDFEELRPLGH 425
Query: 392 GGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFE 451
GGFGHVVLCKNKLDGR YAVKKIRLKDKS+P DRILREVATLSRLQHQHVVRYYQAWFE
Sbjct: 426 GGFGHVVLCKNKLDGRQYAVKKIRLKDKSMP--DRILREVATLSRLQHQHVVRYYQAWFE 483
Query: 452 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE 511
TGV+D GDS WGS T SSTFS +AA+S D G EN+LESTYLYIQMEYCPRTLRQVFE
Sbjct: 484 TGVSDSYGDSTWGSKTTVSSTFSYKAATSNDALGHENQLESTYLYIQMEYCPRTLRQVFE 543
Query: 512 SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL 571
SY+HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL
Sbjct: 544 SYNHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL 603
Query: 572 EQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHP 631
EQLDQD P D GVS+DGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG+VFFELWHP
Sbjct: 604 EQLDQDLGHPADATGVSIDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGVVFFELWHP 663
Query: 632 FSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691
F T MER ++LSDLKQK E+P +WV +F EQESLLR+LMSP+PSDRPSATELLQ+A P +
Sbjct: 664 FGTGMERHVILSDLKQKREVPHTWVVEFPEQESLLRQLMSPAPSDRPSATELLQNAFPQR 723
Query: 692 MEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMKHHAGTLRLNRDNTSSIQYSDLD 751
ME ELLD+ILR M SEDTSIYDKV+++IFDEE L KH R N+SSIQY+D +
Sbjct: 724 MESELLDDILRTMQKSEDTSIYDKVLNAIFDEEMLSTKH-------IRQNSSSIQYTDFE 776
Query: 752 TELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRL 811
TE+RDYVV +E+FRQHCAKHLEI M LL DCPQF RN VKLLTHGGD+LEL HELRL
Sbjct: 777 TEVRDYVVDANREIFRQHCAKHLEIPTMRLLDDCPQFNRNAVKLLTHGGDMLELCHELRL 836
Query: 812 PFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTMD 871
PF+ W ISNQKSSFKRYEIS V+RRAIGHS PN YLQGDFDIIGG SALTEAEV+KVT D
Sbjct: 837 PFVNWIISNQKSSFKRYEISCVFRRAIGHSSPNHYLQGDFDIIGGTSALTEAEVIKVTRD 896
Query: 872 IVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWV 931
IVT FFH +SCDIHLNHGDLL+AIWSW G+K EHR KVAELL+MMGSLRPQSSE KSKWV
Sbjct: 897 IVTCFFHEDSCDIHLNHGDLLDAIWSWIGVKVEHRLKVAELLSMMGSLRPQSSERKSKWV 956
Query: 932 VIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDEL----- 986
VIRRQLLQELNLAEA+VNRLQTVGLRFCG+ADQALPRLRGALP+DK KALDEL
Sbjct: 957 VIRRQLLQELNLAEAMVNRLQTVGLRFCGSADQALPRLRGALPSDKRAFKALDELSELVS 1016
Query: 987 YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHR 1046
LRIWRI+KNIYIDALMPP ESYHR+LFFQV+ KE P +L EG LLAVGGRYDYL H+
Sbjct: 1017 LLRIWRIDKNIYIDALMPPTESYHRDLFFQVYLRKENSPGSLSEGALLAVGGRYDYLFHQ 1076
Query: 1047 MWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVE 1106
+W +Y G NPP+GVG SLALETIIQ+ PVDFKP RNEA ++LVCSRGGGGLLVE
Sbjct: 1077 LWSSDYKG-----NPPTGVGTSLALETIIQNCPVDFKPNRNEASINILVCSRGGGGLLVE 1131
Query: 1107 RMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTG-AQKGLVKVRHLD 1165
RMELVAELWEEN KA+FVP PDPSLTEQYEYA+EH IKCLVI+TDT + G VKVRHL+
Sbjct: 1132 RMELVAELWEENFKAEFVPTPDPSLTEQYEYANEHGIKCLVIITDTDFSLTGSVKVRHLE 1191
Query: 1166 VKKEKEVQRESLVRFLLDAIASQFRNPSLW 1195
K+EK V++++LV+FL DA+A+QFRNPS+W
Sbjct: 1192 HKREKNVEKKNLVKFLSDAMATQFRNPSIW 1221
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30694992|ref|NP_191500.2| non-specific serine/threonine protein kinase [Arabidopsis thaliana] gi|68052253|sp|Q9LX30.2|GCN2_ARATH RecName: Full=Probable serine/threonine-protein kinase GCN2 gi|24940154|emb|CAD30860.1| GCN2 homologue [Arabidopsis thaliana] gi|332646397|gb|AEE79918.1| non-specific serine/threonine protein kinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1627 bits (4212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 823/1234 (66%), Positives = 938/1234 (76%), Gaps = 68/1234 (5%)
Query: 19 QSKDHSSSTVDDNELLSEEITAL------------------------------------- 41
Q KDH S+ +DNELLSEEITAL
Sbjct: 20 QLKDHGSNADEDNELLSEEITALSAIFQEDCKVVSDSRSPPQIAIKLRPYSKDMGYEDTD 79
Query: 42 --------CLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVE 93
CLPGYPYKCPKLQITPE+GLT +DA+ LL LL+DQANSNAREGRVMIFNLVE
Sbjct: 80 ISAMLIVRCLPGYPYKCPKLQITPEQGLTTADAEKLLSLLEDQANSNAREGRVMIFNLVE 139
Query: 94 AAQEFLSEIVPLGQSNESVPGLVTESSSQSFEGSAVS-ASKSCSSKVPFVYGFIDLFSGC 152
AAQEFLSEI+P ESVP L S+Q E +S +KSCS PFVYGFIDLFSG
Sbjct: 140 AAQEFLSEIIPESHDEESVPCLTAHRSTQFIEQPMLSNIAKSCSGG-PFVYGFIDLFSGL 198
Query: 153 GESWHWGLGIDENRGVVPSVPSHASDGSNYEVMWRKIDKNVKPLMIPDANQGTALIPSAK 212
++ +W L DENRG+V SV SH D S ++ +K DKN+K + P AK
Sbjct: 199 EDARNWSLTPDENRGIVSSVQSHPLDTSR--ILHQKPDKNLKRFEDHAKEEVALPAPIAK 256
Query: 213 LDTVKEENEDDNRSISTTDSSTSPMEEWVENGI-KGENRDSLLQDHGSNNDGGDTEIDRL 271
L+TV+EEN DD S S ++ + VE+G+ + E ++S LQD + +D ++E + L
Sbjct: 257 LNTVQEENVDDTSISSFDSSKST---DDVESGLFQNEKKESNLQDDTAEDDSTNSESESL 313
Query: 272 ESFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLTDALPQIATELYNLGIFSERGRD 331
S+S SL QDQ Q +KDL++VHLLR+AC S G L DALPQI EL+ LGI SE D
Sbjct: 314 GSWSSDSLAQDQVPQISKKDLLMVHLLRVACTSRGPLADALPQITDELHELGILSEEVLD 373
Query: 332 LASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGH 391
LASK S FN+TF F+Q M S+ V QFW+P DS PN SLPSSRYLNDFEEL+PLG
Sbjct: 374 LASKSSPDFNRTFEHAFNQNMASTSVPQFWEPPSDSCEPNASLPSSRYLNDFEELKPLGQ 433
Query: 392 GGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFE 451
GGFGHVVLCKNKLDGR YAVKKIRLKDK +PVN RI+REVATLSRLQHQHVVRYYQAWFE
Sbjct: 434 GGFGHVVLCKNKLDGRQYAVKKIRLKDKEIPVNSRIVREVATLSRLQHQHVVRYYQAWFE 493
Query: 452 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE 511
TGV D + WGS T SS FS A S ++ Q+N LESTYLYIQMEYCPRTLRQVFE
Sbjct: 494 TGVVDPFAGANWGSKTAGSSMFSYSGAVSTEIPEQDNNLESTYLYIQMEYCPRTLRQVFE 553
Query: 512 SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL 571
SY+HFDK+ AWHL RQIVEGLAHIHGQGIIHRD TPNNIFFDARNDIKIGDFGLAKFLKL
Sbjct: 554 SYNHFDKDFAWHLIRQIVEGLAHIHGQGIIHRDFTPNNIFFDARNDIKIGDFGLAKFLKL 613
Query: 572 EQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHP 631
EQLDQD F TD G VD TGQ GTYFYTAPEIEQ WPKIDEKADMYSLG+VFFELWHP
Sbjct: 614 EQLDQDGGFSTDVAGSGVDSTGQAGTYFYTAPEIEQDWPKIDEKADMYSLGVVFFELWHP 673
Query: 632 FSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691
F TAMER ++L++LK KGELP WV +F EQ SLLRRLMSPSPSDRPSATELL+ A PP+
Sbjct: 674 FGTAMERHVILTNLKLKGELPLKWVNEFPEQASLLRRLMSPSPSDRPSATELLKHAFPPR 733
Query: 692 MEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMK-HHAGTLRLNRDNTSSIQYSDL 750
ME ELLDNILR+M +SED+S+YD+VVS IFDEE L+MK H + RL D+ S IQY+++
Sbjct: 734 MESELLDNILRIMQTSEDSSVYDRVVSVIFDEEVLEMKSHQSSRSRLCADD-SYIQYTEI 792
Query: 751 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELR 810
+TELRDYVV++TKE+FRQHCAKHLE+ PM LL DCPQF R TVKLLT+GGD+LEL +ELR
Sbjct: 793 NTELRDYVVEITKEVFRQHCAKHLEVIPMRLLSDCPQFSRKTVKLLTNGGDMLELCYELR 852
Query: 811 LPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTM 870
LPF+ W NQKSSFKRYEIS VYRRAIGHSPPN LQ DFDI+GG +LTEAEVLKV +
Sbjct: 853 LPFVHWISVNQKSSFKRYEISHVYRRAIGHSPPNPCLQADFDIVGGTLSLTEAEVLKVIV 912
Query: 871 DIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKW 930
DI T FH SCDIHLNHGDLL+AIWSWAGIKAEHR KVAELL+MMGSLRPQSSE K KW
Sbjct: 913 DITTHIFHRGSCDIHLNHGDLLDAIWSWAGIKAEHRRKVAELLSMMGSLRPQSSERKLKW 972
Query: 931 VVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDEL---- 986
V IRRQLLQEL L EAVVNRLQTV RFCG ADQALPRLRGAL AD+PTRKALDEL
Sbjct: 973 VFIRRQLLQELKLPEAVVNRLQTVASRFCGDADQALPRLRGALRADRPTRKALDELSNLL 1032
Query: 987 -YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLH 1045
YLR+WRIE++++ID LMPP ESYHRNLFFQVF KE T +G LLAVGGRYD+L+
Sbjct: 1033 TYLRVWRIEEHVHIDVLMPPTESYHRNLFFQVFLTKENSSGTSNDGVLLAVGGRYDWLVQ 1092
Query: 1046 RMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLV 1105
+ DRE+ + N P VG SLALETI QH P+D +P+RNE TSVLVCSRGGGGLLV
Sbjct: 1093 EVCDREH-----KMNLPGAVGVSLALETIFQHLPMDLRPIRNEVSTSVLVCSRGGGGLLV 1147
Query: 1106 ERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGA---QKGLVKVR 1162
+RMELVAELWE++IKA+FVP PDPSLTEQYEYA+EH+IKCLVI+T++G Q VKVR
Sbjct: 1148 QRMELVAELWEKSIKAEFVPTPDPSLTEQYEYANEHEIKCLVIITESGVAQNQIEFVKVR 1207
Query: 1163 HLDVKKEKEVQRESLVRFLLDAIASQFRNPSLWS 1196
HL++KKEK V RE LV+FLLDA+A QFRNPS+WS
Sbjct: 1208 HLELKKEKVVGREELVKFLLDAMAVQFRNPSVWS 1241
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297817238|ref|XP_002876502.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297322340|gb|EFH52761.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1623 bits (4204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 825/1236 (66%), Positives = 942/1236 (76%), Gaps = 71/1236 (5%)
Query: 19 QSKDHSSSTVDDNELLSEEITAL------------------------------------- 41
Q KDH S+ +DNELLSEEITAL
Sbjct: 20 QLKDHGSNADEDNELLSEEITALSAIFQEDCKIVSDSRSPPQIVIKLRFSYSKDMGYEDI 79
Query: 42 ---------CLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLV 92
CLPGYPYKCPKLQITPE+GLT +DA+ LL LL+DQANSNAREGRVMIFNLV
Sbjct: 80 DISAMLVVRCLPGYPYKCPKLQITPEQGLTTADAEKLLSLLEDQANSNAREGRVMIFNLV 139
Query: 93 EAAQEFLSEIVPLGQSNESVPGLVTESSSQSFEGSAVS-ASKSCSSKVPFVYGFIDLFSG 151
EAAQEFLSEI+P E VP L S+Q E +S +KSC+ PFVYGFIDLFSG
Sbjct: 140 EAAQEFLSEIIPESHDEEPVPCLTAHRSAQFIEQPMLSNKAKSCTGG-PFVYGFIDLFSG 198
Query: 152 CGESWHWGLGIDENRGVVPSVPSHASDGSNYEVMWRKIDKNVKPLMIPDANQGTAL-IPS 210
++ +W L DENRG+V SV SH D S ++ K DKN+K + A + AL P+
Sbjct: 199 LEDARNWSLTPDENRGIVSSVQSHPLDTSR--ILHEKSDKNLKRF-VDHAKEEIALPAPT 255
Query: 211 AKLDTVKEENEDDNRSISTTDSSTSPMEEWVENGI-KGENRDSLLQDHGSNNDGGDTEID 269
AKL+TV+E+N DD S S ++ + VE+G+ + E ++S LQD + +D ++E +
Sbjct: 256 AKLNTVQEDNVDDTSISSFDSSKST---DDVESGLFQNEKKESNLQDDTAEDDSSNSESE 312
Query: 270 RLESFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLTDALPQIATELYNLGIFSERG 329
L S+S SL QDQ Q +KDL++VHLLR+AC S G L DALPQI EL+ LGI SE
Sbjct: 313 SLGSWSSDSLSQDQVPQISKKDLLMVHLLRVACTSRGPLADALPQITDELHQLGILSEEA 372
Query: 330 RDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPL 389
DLASK S FN+TF F+Q MVS+ V QFW+P DSG PN SLPSSRYLNDFEEL+PL
Sbjct: 373 LDLASKSSPDFNRTFEHAFNQNMVSTSVPQFWEPPSDSGEPNASLPSSRYLNDFEELKPL 432
Query: 390 GHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAW 449
G GGFGHVVLCKNKLDGR YAVKKIRLK+K +PVN RI+REVATLSRLQHQHVVRYYQAW
Sbjct: 433 GQGGFGHVVLCKNKLDGRQYAVKKIRLKEKEIPVNSRIVREVATLSRLQHQHVVRYYQAW 492
Query: 450 FETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQV 509
FETGV D + WGS T SS FS A S ++ Q+N LESTYLYIQMEYCPRTLRQV
Sbjct: 493 FETGVVDPFAGANWGSKTAGSSMFSYSGAVSTEIPEQDNNLESTYLYIQMEYCPRTLRQV 552
Query: 510 FESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 569
FESY+HFDK+ AWHL RQIVEGLAHIHGQGIIHRD TPNNIFFDARNDIKIGDFGLAKFL
Sbjct: 553 FESYNHFDKDFAWHLIRQIVEGLAHIHGQGIIHRDFTPNNIFFDARNDIKIGDFGLAKFL 612
Query: 570 KLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW 629
KLEQLDQD F TD G VD TGQ GTYFYTAPEIEQ WPKIDEKADMYSLG+VFFELW
Sbjct: 613 KLEQLDQDGGFSTDVAGSGVDSTGQAGTYFYTAPEIEQDWPKIDEKADMYSLGVVFFELW 672
Query: 630 HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689
HPF TAMER ++L+DLK KGELP WV +F EQ SLLRRLMSPSPSDRPSATELL+ A P
Sbjct: 673 HPFGTAMERHVILTDLKLKGELPLKWVNEFPEQASLLRRLMSPSPSDRPSATELLKHAFP 732
Query: 690 PQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMK-HHAGTLRLNRDNTSSIQYS 748
P+ME ELLDNILR+M +SED+S+YD+VVS IFDEE L+MK H + + RL D+ S IQY+
Sbjct: 733 PRMESELLDNILRIMQTSEDSSVYDRVVSVIFDEEVLEMKSHQSSSSRLCADD-SYIQYT 791
Query: 749 DLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHE 808
+++TELRDYVV +TKE+FRQHCAKHLE+ PM LL DCPQF R TVKLLT+GGD+LEL +E
Sbjct: 792 EINTELRDYVVDITKEVFRQHCAKHLEVIPMRLLSDCPQFSRKTVKLLTNGGDMLELCYE 851
Query: 809 LRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALTEAEVLKV 868
LRLPF+ W NQKSSFKRYEIS VYRRAIGHSPPN LQ DFDI+GG +LTEAEVLKV
Sbjct: 852 LRLPFVNWISVNQKSSFKRYEISHVYRRAIGHSPPNPCLQADFDIVGGTPSLTEAEVLKV 911
Query: 869 TMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKS 928
+DI T FH SCDIHLNHGDLL+AIWSWAGIKAEHR KVAELL+MMGSLRPQSSE K
Sbjct: 912 IVDITTHIFHRGSCDIHLNHGDLLDAIWSWAGIKAEHRRKVAELLSMMGSLRPQSSERKL 971
Query: 929 KWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDEL-- 986
KWV IRRQLLQEL L EAVVNRLQTV RFCG ADQALPRLRGAL AD+PTRKALDEL
Sbjct: 972 KWVFIRRQLLQELKLPEAVVNRLQTVASRFCGDADQALPRLRGALRADRPTRKALDELSN 1031
Query: 987 ---YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1043
YLR+WRIE++++ID LMPP ESYHRNLFFQVF KE T +G LLAVGGRYD+L
Sbjct: 1032 LLTYLRVWRIEEHVHIDVLMPPTESYHRNLFFQVFLTKENSSGTSSDGVLLAVGGRYDFL 1091
Query: 1044 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGL 1103
+ + DREY + N P VG SLALETI QH P+D +P+RNE TSVLVCSRGGGGL
Sbjct: 1092 VQEVCDREY-----KMNLPGAVGVSLALETIFQHLPMDLRPIRNEVSTSVLVCSRGGGGL 1146
Query: 1104 LVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGA---QKGLVK 1160
LV+RMELVAELWE++IKA+FVP PDPSLTEQYEYA+EH+IKCLVI+ ++G Q VK
Sbjct: 1147 LVQRMELVAELWEKSIKAEFVPTPDPSLTEQYEYANEHEIKCLVIIAESGVAQNQIEFVK 1206
Query: 1161 VRHLDVKKEKEVQRESLVRFLLDAIASQFRNPSLWS 1196
VRHL++KKEK V RE LV+FLLDA+A QFRNPS+WS
Sbjct: 1207 VRHLELKKEKVVGREELVKFLLDAMAVQFRNPSVWS 1242
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|334186129|ref|NP_001190135.1| non-specific serine/threonine protein kinase [Arabidopsis thaliana] gi|332646398|gb|AEE79919.1| non-specific serine/threonine protein kinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1617 bits (4188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 813/1193 (68%), Positives = 928/1193 (77%), Gaps = 27/1193 (2%)
Query: 15 KGRAQSKDHSSSTVDDNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQ 74
K R SKD D +S + CLPGYPYKCPKLQITPE+GLT +DA+ LL LL+
Sbjct: 89 KLRPYSKDMGYEDTD----ISAMLIVRCLPGYPYKCPKLQITPEQGLTTADAEKLLSLLE 144
Query: 75 DQANSNAREGRVMIFNLVEAAQEFLSEIVPLGQSNESVPGLVTESSSQSFEGSAVS-ASK 133
DQANSNAREGRVMIFNLVEAAQEFLSEI+P ESVP L S+Q E +S +K
Sbjct: 145 DQANSNAREGRVMIFNLVEAAQEFLSEIIPESHDEESVPCLTAHRSTQFIEQPMLSNIAK 204
Query: 134 SCSSKVPFVYGFIDLFSGCGESWHWGLGIDENRGVVPSVPSHASDGSNYEVMWRKIDKNV 193
SCS PFVYGFIDLFSG ++ +W L DENRG+V SV SH D S ++ +K DKN+
Sbjct: 205 SCSGG-PFVYGFIDLFSGLEDARNWSLTPDENRGIVSSVQSHPLDTSR--ILHQKPDKNL 261
Query: 194 KPLMIPDANQGTALIPSAKLDTVKEENEDDNRSISTTDSSTSPMEEWVENGI-KGENRDS 252
K + P AKL+TV+EEN DD S S ++ + VE+G+ + E ++S
Sbjct: 262 KRFEDHAKEEVALPAPIAKLNTVQEENVDDTSISSFDSSKST---DDVESGLFQNEKKES 318
Query: 253 LLQDHGSNNDGGDTEIDRLESFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLTDAL 312
LQD + +D ++E + L S+S SL QDQ Q +KDL++VHLLR+AC S G L DAL
Sbjct: 319 NLQDDTAEDDSTNSESESLGSWSSDSLAQDQVPQISKKDLLMVHLLRVACTSRGPLADAL 378
Query: 313 PQIATELYNLGIFSERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNM 372
PQI EL+ LGI SE DLASK S FN+TF F+Q M S+ V QFW+P DS PN
Sbjct: 379 PQITDELHELGILSEEVLDLASKSSPDFNRTFEHAFNQNMASTSVPQFWEPPSDSCEPNA 438
Query: 373 SLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVA 432
SLPSSRYLNDFEEL+PLG GGFGHVVLCKNKLDGR YAVKKIRLKDK +PVN RI+REVA
Sbjct: 439 SLPSSRYLNDFEELKPLGQGGFGHVVLCKNKLDGRQYAVKKIRLKDKEIPVNSRIVREVA 498
Query: 433 TLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLES 492
TLSRLQHQHVVRYYQAWFETGV D + WGS T SS FS A S ++ Q+N LES
Sbjct: 499 TLSRLQHQHVVRYYQAWFETGVVDPFAGANWGSKTAGSSMFSYSGAVSTEIPEQDNNLES 558
Query: 493 TYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
TYLYIQMEYCPRTLRQVFESY+HFDK+ AWHL RQIVEGLAHIHGQGIIHRD TPNNIFF
Sbjct: 559 TYLYIQMEYCPRTLRQVFESYNHFDKDFAWHLIRQIVEGLAHIHGQGIIHRDFTPNNIFF 618
Query: 553 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612
DARNDIKIGDFGLAKFLKLEQLDQD F TD G VD TGQ GTYFYTAPEIEQ WPKI
Sbjct: 619 DARNDIKIGDFGLAKFLKLEQLDQDGGFSTDVAGSGVDSTGQAGTYFYTAPEIEQDWPKI 678
Query: 613 DEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 672
DEKADMYSLG+VFFELWHPF TAMER ++L++LK KGELP WV +F EQ SLLRRLMSP
Sbjct: 679 DEKADMYSLGVVFFELWHPFGTAMERHVILTNLKLKGELPLKWVNEFPEQASLLRRLMSP 738
Query: 673 SPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMK-HH 731
SPSDRPSATELL+ A PP+ME ELLDNILR+M +SED+S+YD+VVS IFDEE L+MK H
Sbjct: 739 SPSDRPSATELLKHAFPPRMESELLDNILRIMQTSEDSSVYDRVVSVIFDEEVLEMKSHQ 798
Query: 732 AGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRN 791
+ RL D+ S IQY++++TELRDYVV++TKE+FRQHCAKHLE+ PM LL DCPQF R
Sbjct: 799 SSRSRLCADD-SYIQYTEINTELRDYVVEITKEVFRQHCAKHLEVIPMRLLSDCPQFSRK 857
Query: 792 TVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRYLQGDF 851
TVKLLT+GGD+LEL +ELRLPF+ W NQKSSFKRYEIS VYRRAIGHSPPN LQ DF
Sbjct: 858 TVKLLTNGGDMLELCYELRLPFVHWISVNQKSSFKRYEISHVYRRAIGHSPPNPCLQADF 917
Query: 852 DIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAE 911
DI+GG +LTEAEVLKV +DI T FH SCDIHLNHGDLL+AIWSWAGIKAEHR KVAE
Sbjct: 918 DIVGGTLSLTEAEVLKVIVDITTHIFHRGSCDIHLNHGDLLDAIWSWAGIKAEHRRKVAE 977
Query: 912 LLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRG 971
LL+MMGSLRPQSSE K KWV IRRQLLQEL L EAVVNRLQTV RFCG ADQALPRLRG
Sbjct: 978 LLSMMGSLRPQSSERKLKWVFIRRQLLQELKLPEAVVNRLQTVASRFCGDADQALPRLRG 1037
Query: 972 ALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPA 1026
AL AD+PTRKALDEL YLR+WRIE++++ID LMPP ESYHRNLFFQVF KE
Sbjct: 1038 ALRADRPTRKALDELSNLLTYLRVWRIEEHVHIDVLMPPTESYHRNLFFQVFLTKENSSG 1097
Query: 1027 TLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVR 1086
T +G LLAVGGRYD+L+ + DRE+ + N P VG SLALETI QH P+D +P+R
Sbjct: 1098 TSNDGVLLAVGGRYDWLVQEVCDREH-----KMNLPGAVGVSLALETIFQHLPMDLRPIR 1152
Query: 1087 NEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCL 1146
NE TSVLVCSRGGGGLLV+RMELVAELWE++IKA+FVP PDPSLTEQYEYA+EH+IKCL
Sbjct: 1153 NEVSTSVLVCSRGGGGLLVQRMELVAELWEKSIKAEFVPTPDPSLTEQYEYANEHEIKCL 1212
Query: 1147 VILTDTGA---QKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQFRNPSLWS 1196
VI+T++G Q VKVRHL++KKEK V RE LV+FLLDA+A QFRNPS+WS
Sbjct: 1213 VIITESGVAQNQIEFVKVRHLELKKEKVVGREELVKFLLDAMAVQFRNPSVWS 1265
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449446446|ref|XP_004140982.1| PREDICTED: probable serine/threonine-protein kinase GCN2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1540 bits (3987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 798/1306 (61%), Positives = 933/1306 (71%), Gaps = 149/1306 (11%)
Query: 14 SKGRAQSKDHSSSTVDDNELLSEEITALC------------------------------- 42
SKGR D+S S ++++L++EE+TALC
Sbjct: 19 SKGRTPLTDYSFSG-EESDLITEEMTALCAIFQEDCKVVTGPSPQVTIKLKPYSNDMGFE 77
Query: 43 ------------LPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFN 90
LPGYPYKCPKL ITPE+GL K D + LL LL +QAN NAR+GR+MIFN
Sbjct: 78 DRDVSALFSVKYLPGYPYKCPKLLITPERGLAKGDTEKLLSLLHEQANYNARDGRIMIFN 137
Query: 91 LVEAAQEFLSEIVPLGQSNESVPGLVTESSSQSFEGSAVSASKSCSSKVPFVYGFIDLFS 150
L EAAQEFLSEIV +G+SNES T S+SQ S K K P+VYG+IDLFS
Sbjct: 138 LAEAAQEFLSEIVTIGESNESAVRSHTASTSQLLPEKTTSNEK----KGPYVYGYIDLFS 193
Query: 151 GCGESWHWGLGIDE--NRGVVPSVPSHASDGSNYEVMWRKIDKNVKPLMIPDANQGTALI 208
G GE W W +DE N P V G+ V +K+DK L ++ +G L
Sbjct: 194 GSGELWSWSFDMDEKLNSLAQPLVADSLKLGA---VQEKKLDKVQNLLARQNSKRGELLS 250
Query: 209 PSAKLDTVKEE---------------------NEDDNRS-----ISTTDSSTSPM----- 237
PS+ L T++EE NED N S TDS T+P
Sbjct: 251 PSSNLGTLEEETEGDSQSKSSSNSRRSLIVQRNEDGNEGEMQDRTSATDSLTTPAIDSAA 310
Query: 238 -------------------------EEW-------------VENGIKGENRDSLLQDHGS 259
++W +E+ + DS+L +
Sbjct: 311 FCAKSPSHDSERHNGKPIPICEHCKKQWHTRSSVGSYMVVSLEHEVLIPGLDSILTSDVA 370
Query: 260 NNDGGDTEIDRLESFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLTDALPQIATEL 319
D +E + E +SFAS +Q SQ ++D+++VHLL LAC G L DALP++A+EL
Sbjct: 371 EGDDHGSESEASE-WSFASFSNEQESQTTDRDIMMVHLLHLACAPKGPLADALPKLASEL 429
Query: 320 YNLGIFSERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRY 379
NLG+ S+ DLASKPSS F+K F F ++M ++ SQFW + D G S SSRY
Sbjct: 430 CNLGVLSKAALDLASKPSSTFHKKFKTAFQEQMNATSFSQFW--TSDFGGSASSQLSSRY 487
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 439
LNDFEEL+PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK LPVNDRILREVATLSRLQH
Sbjct: 488 LNDFEELKPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKILPVNDRILREVATLSRLQH 547
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
QHVVRYYQAW+E+GV+D G++ WGS T SSTFS + AS+ D ENK ESTYLYIQM
Sbjct: 548 QHVVRYYQAWYESGVSDSYGEAAWGSMTPLSSTFSYKGASATDAE-HENKTESTYLYIQM 606
Query: 500 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
EYCPRTLRQ FESY FDKELAWHLF QIVEGLAHIHGQGIIHRDLTP+NIFFDARNDIK
Sbjct: 607 EYCPRTLRQDFESYTRFDKELAWHLFHQIVEGLAHIHGQGIIHRDLTPSNIFFDARNDIK 666
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619
IGDFGLAKFLKLEQLDQD P DT GVS+DGTGQVGTYFYTAPEIEQGWPKIDEKADMY
Sbjct: 667 IGDFGLAKFLKLEQLDQDVGVPLDTTGVSIDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 726
Query: 620 SLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 679
SLGIVFFELWHPF+TAMER +VLSDLKQKGELP WVA+FSEQ SLLRRLMS SPS+RPS
Sbjct: 727 SLGIVFFELWHPFATAMERHLVLSDLKQKGELPTVWVAEFSEQASLLRRLMSQSPSERPS 786
Query: 680 ATELLQDALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMK---HHAGTLR 736
A+ELLQ A PP+MEY+LLDNILR M SSED+SIYD+VV++IFDEE+L MK H G
Sbjct: 787 ASELLQHAFPPRMEYQLLDNILRTMKSSEDSSIYDRVVNAIFDEESLVMKDDRHDCG--- 843
Query: 737 LNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLL 796
T++IQY+DL TE+RD+V+ T+EMFR HCAKHLE+ MYLL Q RNTVKLL
Sbjct: 844 -----TATIQYTDLGTEVRDHVIDATREMFRLHCAKHLEMSSMYLLDSSTQINRNTVKLL 898
Query: 797 THGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGG 856
+HGGD+LEL HELRLPF+ W + +QKSSFKRY+IS VYRRAIGHSPPNRYLQGDFDIIGG
Sbjct: 899 SHGGDILELCHELRLPFLNWLVFSQKSSFKRYDISYVYRRAIGHSPPNRYLQGDFDIIGG 958
Query: 857 ASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMM 916
SALTEAEV+KVT+DI++ FF+++SCDIHLNHGDLL AIWSW G+KAEHR KVAELL+MM
Sbjct: 959 TSALTEAEVIKVTVDIISYFFNSDSCDIHLNHGDLLNAIWSWVGVKAEHRHKVAELLSMM 1018
Query: 917 GSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPAD 976
SLRPQSSE KSKWVVIRRQLLQEL LA+AVVNRLQTV RFCGA DQALPRLRGALP D
Sbjct: 1019 VSLRPQSSERKSKWVVIRRQLLQELKLAQAVVNRLQTVVFRFCGAVDQALPRLRGALPTD 1078
Query: 977 KPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEG 1031
K KALDEL YLR+WR+E N+YIDALM P E YHR++FFQV+ KE P + EG
Sbjct: 1079 KSMHKALDELLNLFNYLRVWRLETNVYIDALMSPTEGYHRDIFFQVYLTKENNPGSHPEG 1138
Query: 1032 TLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGT 1091
LLA+GGRYDYLL +MW R Y +++PP GVG S+ALETIIQ +D KP+RNE T
Sbjct: 1139 ALLAIGGRYDYLLQQMWSRSY-----KSSPPGGVGTSIALETIIQQSALDLKPIRNEGST 1193
Query: 1092 SVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTD 1151
SVL+CSR GGGLL+ERMELV ELWEE IKAQ VP PDPSLTEQYEYA+EHDIKCLVI+TD
Sbjct: 1194 SVLICSR-GGGLLLERMELVVELWEEKIKAQLVPTPDPSLTEQYEYANEHDIKCLVIITD 1252
Query: 1152 TG-AQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQFRNPSLWS 1196
+G + G VKVRHL++KKEK+V+R +V+FL +A+A+QF+NP +W+
Sbjct: 1253 SGVSNTGSVKVRHLELKKEKKVERTYIVKFLQEAMANQFKNPLIWN 1298
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|7801691|emb|CAB91611.1| protein kinase like [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1529 bits (3959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 787/1212 (64%), Positives = 904/1212 (74%), Gaps = 48/1212 (3%)
Query: 15 KGRAQSKDHSSSTVDDNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQ 74
K R SKD D +S + CLPGYPYKCPKLQITPE+G +++L +Q
Sbjct: 78 KLRPYSKDMGYEDTD----ISAMLIVRCLPGYPYKCPKLQITPEQGHGNIFYNDILYGIQ 133
Query: 75 DQANSNAREGRVMIFNLVEAAQEFLSEIVPLGQSNESVPGLVTESSSQSFEGSAVS-ASK 133
S +GRVMIFNLVEAAQEFLSEI+P ESVP L S+Q E +S +K
Sbjct: 134 --KCSMLTQGRVMIFNLVEAAQEFLSEIIPESHDEESVPCLTAHRSTQFIEQPMLSNIAK 191
Query: 134 SCSSKVPFVYGFIDLFSGCGESWHWGLGIDENRGVVPSVPSHASDGSNYEVMWRKIDKNV 193
SCS PFVYGFIDLFSG ++ +W L DENRG+V SV SH D S ++ +K DKN+
Sbjct: 192 SCSGG-PFVYGFIDLFSGLEDARNWSLTPDENRGIVSSVQSHPLDTSR--ILHQKPDKNL 248
Query: 194 KPLMIPDANQGTALIPSAKLDTVKEENEDDNRSISTTDSSTSPMEEWVENGI-KGENRDS 252
K + P AKL+TV+EEN DD S S ++ + VE+G+ + E ++S
Sbjct: 249 KRFEDHAKEEVALPAPIAKLNTVQEENVDDTSISSFDSSKST---DDVESGLFQNEKKES 305
Query: 253 LLQDHGSNNDGGDTEIDRLESFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLTDAL 312
LQD + +D ++E + L S+S SL QDQ Q +KDL++VHLLR+AC S G L DAL
Sbjct: 306 NLQDDTAEDDSTNSESESLGSWSSDSLAQDQVPQISKKDLLMVHLLRVACTSRGPLADAL 365
Query: 313 PQIATELYNLGIFSERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNM 372
PQI EL+ LGI SE DLASK S FN+TF F+Q M S+ V QFW+P DS PN
Sbjct: 366 PQITDELHELGILSEEVLDLASKSSPDFNRTFEHAFNQNMASTSVPQFWEPPSDSCEPNA 425
Query: 373 SLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRI----- 427
SLPSSRYLNDFEEL+PLG GGFGHVVLCKNKLDGR YAVKKIRLKDK +PVN RI
Sbjct: 426 SLPSSRYLNDFEELKPLGQGGFGHVVLCKNKLDGRQYAVKKIRLKDKEIPVNSRIIGLEY 485
Query: 428 -------------LREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFS 474
LREVATLSRLQHQHVVRYYQAWFETGV D + WGS T SS FS
Sbjct: 486 NAKSVFTCARYEVLREVATLSRLQHQHVVRYYQAWFETGVVDPFAGANWGSKTAGSSMFS 545
Query: 475 NRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534
A S ++ Q+N LESTYLYIQMEYCPRTLRQVFESY+HFDK+ AWHL RQIVEGLAH
Sbjct: 546 YSGAVSTEIPEQDNNLESTYLYIQMEYCPRTLRQVFESYNHFDKDFAWHLIRQIVEGLAH 605
Query: 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 594
IHGQGIIHRD TPNNIFFDARNDIKIGDFGLAKFLKLEQLDQD F TD G VD TGQ
Sbjct: 606 IHGQGIIHRDFTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDGGFSTDVAGSGVDSTGQ 665
Query: 595 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPS 654
GTYFYTAPEIEQ WPKIDEKADMYSLG+VFFELWHPF TAMER ++L++LK KGELP
Sbjct: 666 AGTYFYTAPEIEQDWPKIDEKADMYSLGVVFFELWHPFGTAMERHVILTNLKLKGELPLK 725
Query: 655 WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDN-ILRMMHSSEDTSIY 713
WV +F EQ SLLRRLMSPSPSDRPSATELL+ A PP+ME ELLD+ +++ +
Sbjct: 726 WVNEFPEQASLLRRLMSPSPSDRPSATELLKHAFPPRMESELLDSEFFAVLYLCQLHMNV 785
Query: 714 DKVVSSIFDEETLDMK-HHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAK 772
+S IFDEE L+MK H + RL D+ S IQY++++TELRDYVV++TKE+FRQHCAK
Sbjct: 786 LGRLSVIFDEEVLEMKSHQSSRSRLCADD-SYIQYTEINTELRDYVVEITKEVFRQHCAK 844
Query: 773 HLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISS 832
HLE+ PM LL DCPQF R TVKLLT+GGD+LEL +ELRLPF+ W NQKSSFKRYEIS
Sbjct: 845 HLEVIPMRLLSDCPQFSRKTVKLLTNGGDMLELCYELRLPFVHWISVNQKSSFKRYEISH 904
Query: 833 VYRRAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLL 892
VYRRAIGHSPPN LQ DFDI+GG +LTEAEVLKV +DI T FH SCDIHLNHGDLL
Sbjct: 905 VYRRAIGHSPPNPCLQADFDIVGGTLSLTEAEVLKVIVDITTHIFHRGSCDIHLNHGDLL 964
Query: 893 EAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQ 952
+AIWSWAGIKAEHR KVAELL+MMGSLRPQSSE K KWV IRRQLLQEL L EAVVNRLQ
Sbjct: 965 DAIWSWAGIKAEHRRKVAELLSMMGSLRPQSSERKLKWVFIRRQLLQELKLPEAVVNRLQ 1024
Query: 953 TVGLRFCGAADQALPRLRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIE 1007
TV RFCG ADQALPRLRGAL AD+PTRKALDEL YLR+WRIE++++ID LMPP E
Sbjct: 1025 TVASRFCGDADQALPRLRGALRADRPTRKALDELSNLLTYLRVWRIEEHVHIDVLMPPTE 1084
Query: 1008 SYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGA 1067
SYHRNLFFQVF KE T +G LLAVGGRYD+L+ + DRE+ + N P VG
Sbjct: 1085 SYHRNLFFQVFLTKENSSGTSNDGVLLAVGGRYDWLVQEVCDREH-----KMNLPGAVGV 1139
Query: 1068 SLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVP 1127
SLALETI QH P+D +P+RNE TSVLVCSRGGGGLLV+RMELVAELWE++IKA+FVP P
Sbjct: 1140 SLALETIFQHLPMDLRPIRNEVSTSVLVCSRGGGGLLVQRMELVAELWEKSIKAEFVPTP 1199
Query: 1128 DPSLTEQYEYASEHDIKCLVILTDTGA---QKGLVKVRHLDVKKEKEVQRESLVRFLLDA 1184
DPSLTEQYEYA+EH+IKCLVI+T++G Q VKVRHL++KKEK V RE LV+FLLDA
Sbjct: 1200 DPSLTEQYEYANEHEIKCLVIITESGVAQNQIEFVKVRHLELKKEKVVGREELVKFLLDA 1259
Query: 1185 IASQFRNPSLWS 1196
+A QFRNPS+WS
Sbjct: 1260 MAVQFRNPSVWS 1271
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297743778|emb|CBI36661.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1304 bits (3374), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/798 (79%), Positives = 691/798 (86%), Gaps = 14/798 (1%)
Query: 390 GHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAW 449
GHGGFGHVVLCKNKLDGR YAVKKIRLKDKS PV DRILREVATLSRLQHQHVVRYYQAW
Sbjct: 30 GHGGFGHVVLCKNKLDGRQYAVKKIRLKDKSPPVYDRILREVATLSRLQHQHVVRYYQAW 89
Query: 450 FETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQV 509
FETGV+ GD+ WGS T ASS+FS + ASSADV ENKLESTYLYIQMEYCPRTLRQ+
Sbjct: 90 FETGVSGSFGDTTWGSMTPASSSFSYKGASSADVNVHENKLESTYLYIQMEYCPRTLRQM 149
Query: 510 FESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 569
FESY HFDKELAWHLFRQIVEGL HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL
Sbjct: 150 FESYSHFDKELAWHLFRQIVEGLVHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 209
Query: 570 KLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW 629
KLEQLDQD P DT GVSVD TGQVGTYFYTAPEIEQGWPKIDEKADMYSLG+VFFELW
Sbjct: 210 KLEQLDQDPGVPPDTTGVSVDRTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGVVFFELW 269
Query: 630 HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689
HPF TAMER IVL+DLKQKGELP SWVA+F EQ SLL+ LMSPSPSDRP ATELLQ A P
Sbjct: 270 HPFGTAMERSIVLNDLKQKGELPSSWVAEFPEQASLLQHLMSPSPSDRPFATELLQHAFP 329
Query: 690 PQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMKH--HAGTLRLNRDNTSSIQY 747
P+MEYELLDNILR M +SEDT +YDKVV++IFD+E L K+ H G LRL D+TSSIQY
Sbjct: 330 PRMEYELLDNILRTMQTSEDTGVYDKVVNAIFDKEMLSAKNLQHFGRLRLVGDDTSSIQY 389
Query: 748 SDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSH 807
+D DTELRD+V +VT+E+FR HCAK LE+ P+ LL DCPQ RNTVKLLTHGGD++EL H
Sbjct: 390 TDSDTELRDHVSEVTREVFRHHCAKRLEVVPIRLLDDCPQTIRNTVKLLTHGGDMIELCH 449
Query: 808 ELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALTEAEVLK 867
ELRLPF+ W I+NQKSSFKRYE+S VYRRAIGHS PNRYLQGDFD+IGGA+ALTEAEV+K
Sbjct: 450 ELRLPFVNWVITNQKSSFKRYEVSYVYRRAIGHSAPNRYLQGDFDMIGGATALTEAEVIK 509
Query: 868 VTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWK 927
V MDIVT FFH+ SC IHLNHGDLLEAIWSW GIKAEHR+KVAELL+MM SLRPQS E K
Sbjct: 510 VAMDIVTHFFHSNSCGIHLNHGDLLEAIWSWIGIKAEHRQKVAELLSMMSSLRPQSPERK 569
Query: 928 SKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDEL- 986
KWVVIRRQL QELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDEL
Sbjct: 570 LKWVVIRRQLQQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDELA 629
Query: 987 ----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDY 1042
YLR+WRIEK+++IDALMPP ESYHR+LFFQ++ +KE P +L EG LLA+GGRYD
Sbjct: 630 DLFSYLRVWRIEKHVFIDALMPPTESYHRDLFFQIYLMKENNPGSLKEGVLLAIGGRYDQ 689
Query: 1043 LLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGG 1102
LL M +AS++NPP VG SLALET+IQH +D +P RNE G +VLVCSRGGGG
Sbjct: 690 LLREM------CFASKSNPPGAVGVSLALETVIQHSSMDIRPFRNEVGINVLVCSRGGGG 743
Query: 1103 LLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQ-KGLVKV 1161
LL ERMELVA LWEENIKA+FVPV DPSLTEQYEYA+EHDIKCLVI+TDTG VKV
Sbjct: 744 LLEERMELVAGLWEENIKAEFVPVSDPSLTEQYEYANEHDIKCLVIITDTGVSPTDFVKV 803
Query: 1162 RHLDVKKEKEVQRESLVR 1179
RHL++KKEKEV+RE+LV+
Sbjct: 804 RHLELKKEKEVERENLVK 821
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357164402|ref|XP_003580041.1| PREDICTED: probable serine/threonine-protein kinase GCN2-like [Brachypodium distachyon] | Back alignment and taxonomy information |
|---|
Score = 1179 bits (3049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 642/1276 (50%), Positives = 827/1276 (64%), Gaps = 118/1276 (9%)
Query: 3 KKKKGGGSGRRSKGRAQSKDHSSSTVDDNELLSEEITAL--------------------- 41
KKKK GG+GR++ +KDH++ D L++E+TAL
Sbjct: 7 KKKKRGGAGRKA-----AKDHAAQLEGDQAALTDELTALAAIFLEDFKVTSESPHTRFNI 61
Query: 42 -----------------------CLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQAN 78
C PGYP KCPKL+I PEK L+K DAD LL LL DQAN
Sbjct: 62 CVRPYSDGMGFGDLNVSAILDVICFPGYPNKCPKLRIIPEKNLSKEDADRLLSLLVDQAN 121
Query: 79 SNAREGRVMIFNLVEAAQEFLSEIVPLGQSNESVPGLVTESSSQSFEGSA-VSASKSCSS 137
+REGRVMIF+LVEAAQEFLSEI P S + P L + + Q+ V
Sbjct: 122 IYSREGRVMIFDLVEAAQEFLSEIAPANDSASTDPHLGSSTIQQTTNADVKVGIDSGPCP 181
Query: 138 KVPFVYGFIDLFSGCGESWHWGLGIDENRGVVPSVPSHASD-GSNYEVMWRKIDKNV--- 193
+ ++Y DL+S + W + +GV P+ S + GS + R K V
Sbjct: 182 GISYIYHLFDLYSQLSDDNSW-----QRQGVDPTTDSARKNVGSQVKSNVRSKRKTVDEK 236
Query: 194 -----------KPLMIPDANQGTAL--------IPSAKLDTVKEENEDDNRSISTTDS-- 232
K + +A Q + +PS L V EE ++D +++ST+D
Sbjct: 237 SRFSADKVNAAKSSSLDNAEQQHVMKHSFTRDAVPS--LHVVAEETDNDRKTLSTSDGGG 294
Query: 233 -STSPMEEW-VENGIKGENRDSLLQDHGSNNDGGDTEIDRLESFSFASLGQDQASQDIEK 290
S +P + V + + + D D + G ++ S+A D AS++ ++
Sbjct: 295 LSDTPERSFSVVHETEDSDADEAWNDEECGSASGSSQ-------SYAPDMFDDASRNKKR 347
Query: 291 DLILVHLLRLACQSTGSLTDALPQIATELYNLGIFSERGRDLASKPSSQFNKTFNQVFHQ 350
DLILVHLLRLAC S SL+ ALP I++EL N+G+ SE ++L S+ + F +TF+ VF Q
Sbjct: 348 DLILVHLLRLACASKDSLSGALPVISSELCNIGVLSEWAKELISESPADFGETFDHVFGQ 407
Query: 351 KMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYA 410
+M+SS S FW+ S PN SRYLNDFEEL+ LG GGFG V LCKNKLDGR YA
Sbjct: 408 QMISSECSLFWRADNSSSRPN-----SRYLNDFEELRSLGQGGFGRVALCKNKLDGRQYA 462
Query: 411 VKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLAS 470
VKKIRL D+S VN++ILREVATLSRLQHQHVVRYYQAW ET + GS T S
Sbjct: 463 VKKIRLNDRSPQVNEKILREVATLSRLQHQHVVRYYQAWVETEYGHHHVLNTGGSRTAES 522
Query: 471 STFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH-FDKELAWHLFRQIV 529
S FS S +D G NK ESTYLYIQMEYCPRTLRQ E+Y FD + AWHLFRQIV
Sbjct: 523 SMFSYDDISLSDA-GAGNKQESTYLYIQMEYCPRTLRQDLETYSSSFDFDRAWHLFRQIV 581
Query: 530 EGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV 589
EGLAH+H QGIIHRDLTP+NIFFD RNDIKIGDFGLAKFLKLEQLD D PT+ GVS+
Sbjct: 582 EGLAHVHSQGIIHRDLTPSNIFFDVRNDIKIGDFGLAKFLKLEQLDNDQYLPTEAIGVSM 641
Query: 590 DGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKG 649
DGTGQVGTYFYTAPE+EQ WP+I+EK DMYS G++FFELWHPFSTAMER +VL+DLKQKG
Sbjct: 642 DGTGQVGTYFYTAPEVEQKWPQINEKVDMYSAGVIFFELWHPFSTAMERHLVLTDLKQKG 701
Query: 650 ELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSED 709
+ P SW A+F Q +LLRRL+ PSPSDRPSA ELLQ+ LPP+ME E L+++LRM+ + ED
Sbjct: 702 DSPISWAAQFPGQSNLLRRLLCPSPSDRPSAVELLQNELPPRMEDEWLNDVLRMIQTPED 761
Query: 710 TSIYDKVVSSIFDEETLDMKHHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQH 769
T +YD+V+S+IF+E+ L K ++ R+++ + +E + +++V+KE+F++H
Sbjct: 762 TYVYDQVISTIFNEDRLVAK-----MQCQRESSKKSTCKNDYSEFLESIIEVSKEVFKRH 816
Query: 770 CAKHLEIEPMYLL-GDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRY 828
CAK +I P++ L G + TVK+L G++LEL +ELR PF+ W +NQ SS+KRY
Sbjct: 817 CAKRFQISPLHTLDGKSTEISGKTVKVLIQRGEMLELCYELRTPFVMWIAANQVSSYKRY 876
Query: 829 EISSVYRRAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNH 888
E+S V+RRA+GHS P R+LQGDFDIIGG+S +TEAEV+KV +D+V RF+ +++ I LNH
Sbjct: 877 EVSWVHRRAVGHSTPYRFLQGDFDIIGGSSPITEAEVIKVALDLVRRFYDSKATVIRLNH 936
Query: 889 GDLLEAIWSWAGIKAEHREKVAELL-AMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAV 947
L EA+ SWAG+ + R+ VAE L + + P ++ KS+W +IR QLLQ+L L+E V
Sbjct: 937 SKLAEAVCSWAGVPHDRRQNVAEFLSSTLVQYCPDKADRKSQWSLIRGQLLQDLRLSEEV 996
Query: 948 VNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDAL 1002
V +L RFCG+AD L RLRG L DK KALD+L LR+W +E++I ID L
Sbjct: 997 VEKLHKADQRFCGSADLVLARLRGTLFYDKSACKALDDLSTFLKCLRVWSVEEHITIDVL 1056
Query: 1003 MPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPP 1062
MPP + Y+ +LFFQV+S KE P LLAVGGRYD L+ + WD+ Y ++ PP
Sbjct: 1057 MPPSDYYYTDLFFQVYS-KEGNPVPSSHEKLLAVGGRYDMLMEQAWDKTY-----KSKPP 1110
Query: 1063 SGVGASLALETIIQHYP-VDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKA 1121
VG S+ALE + + P D R E SVLVCS+GGGGLL ERMELVAELWE NIKA
Sbjct: 1111 GAVGVSIALEKFLPNNPSSDVWLPRIEHSISVLVCSKGGGGLLNERMELVAELWEANIKA 1170
Query: 1122 QFVPVPDPSLTEQYEYASEHDIKCLVILTDTG-AQKGLVKVRHLDVKKEKEVQRESLVRF 1180
QFVP+ DPSL EQYEYAS+HDIKCLV +T+ G +Q L+KVRHLD KKEK+V+RE +V+F
Sbjct: 1171 QFVPLEDPSLQEQYEYASDHDIKCLVFITEAGLSQTDLMKVRHLDAKKEKDVKREDIVKF 1230
Query: 1181 LLDAIASQFRNPSLWS 1196
L DAI+ QF+NP++WS
Sbjct: 1231 LSDAISLQFKNPTIWS 1246
|
Source: Brachypodium distachyon Species: Brachypodium distachyon Genus: Brachypodium Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1196 | ||||||
| DICTYBASE|DDB_G0272837 | 2258 | ifkA "PEK family protein kinas | 0.379 | 0.201 | 0.248 | 5.8e-72 | |
| POMBASE|SPBC36B7.09 | 1576 | gcn2 "eIF2 alpha kinase Gcn2" | 0.575 | 0.436 | 0.287 | 1.4e-71 | |
| UNIPROTKB|E2RS10 | 1651 | EIF2AK4 "Uncharacterized prote | 0.565 | 0.409 | 0.282 | 2.1e-71 | |
| UNIPROTKB|Q9P2K8 | 1649 | EIF2AK4 "Eukaryotic translatio | 0.561 | 0.406 | 0.270 | 2.4e-69 | |
| MGI|MGI:1353427 | 1648 | Eif2ak4 "eukaryotic translatio | 0.560 | 0.406 | 0.280 | 3.8e-69 | |
| UNIPROTKB|D4A7V9 | 1649 | Eif2ak4 "Protein Eif2ak4" [Rat | 0.560 | 0.406 | 0.276 | 1.1e-68 | |
| UNIPROTKB|E1BAL6 | 1649 | EIF2AK4 "Uncharacterized prote | 0.562 | 0.408 | 0.272 | 2e-68 | |
| DICTYBASE|DDB_G0276829 | 1358 | ifkB "PEK family protein kinas | 0.379 | 0.334 | 0.248 | 3.2e-67 | |
| RGD|1311439 | 1572 | Eif2ak4 "eukaryotic translatio | 0.560 | 0.426 | 0.276 | 1.7e-66 | |
| UNIPROTKB|H0YME5 | 1427 | EIF2AK4 "Eukaryotic translatio | 0.594 | 0.498 | 0.263 | 7.5e-65 |
| DICTYBASE|DDB_G0272837 ifkA "PEK family protein kinase IfkA" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 332 (121.9 bits), Expect = 5.8e-72, Sum P(6) = 5.8e-72
Identities = 126/507 (24%), Positives = 219/507 (43%)
Query: 599 FYTAPEI-EQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVA 657
FY PEI E+ K DMYSLGI+FFE+ F T MER +L DL+ + PP + +
Sbjct: 1391 FYCCPEILEKNTKHYGTKVDMYSLGIIFFEMCFQFQTQMERSNILRDLRDNLKFPPGFES 1450
Query: 658 KFSEQEXXXXXXXXXXXXXXXXATELLQDAL-PPQMEYELLDNILRMMHSSEDTSIYDKV 716
+Q +LL+ L P +ME ++L ++ + ++ S++ +
Sbjct: 1451 TKPDQTQIIRSLLSRDPTQRPSTKQLLESGLLPSKMEDDILKEAIKTI-ANPTISLFSYL 1509
Query: 717 VSSIFDEETLDMKHHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLE- 775
+ +F L H + L N S + + R+ +++F H + ++
Sbjct: 1510 MEKLF---CLSNDEHIMSRYLYTSNPS---LTPMHLICREKTFSRLEKIFLNHGSIRIDT 1563
Query: 776 --IEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSV 833
+ P N K L G ++ L ++L +P+ R + + KRY S V
Sbjct: 1564 PTLFPKNPTNSTHPGAANVAKFLDESGTVVYLPYDLTIPWARHVVIHNIQQAKRYTFSKV 1623
Query: 834 YRRAI-GHSPPNRYLQGDFDIIGGASA--LTEAEVLKVTMDIVTRF----FHAESCD--- 883
YRR+ G SP Y + DFDIIG + + +++AE L++ ++I+ F F S
Sbjct: 1624 YRRSQPGFSPKELY-ECDFDIIGPSKSRHISDAETLRIIIEIMEEFKDELFGNNSGSNSG 1682
Query: 884 ----------IHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVI 933
I +NH LL++I S G++ V + +A + W+ W +
Sbjct: 1683 SGSGGSINYKIRINHYGLLDSILSECGVEKRFFTVVYQTVAQL--------HWRLNWAQV 1734
Query: 934 RRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRI 993
Q L+E L+ ++V+ + T R G Q + +L L K + +L + + +
Sbjct: 1735 A-QSLKEHGLSASIVSNISTY-FRQRGELAQCVTQLESLLANHKEATTGISDLKILVRNL 1792
Query: 994 EK-NIY----IDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMW 1048
+ NI +D + Y+ L FQ + ++ + ++ GGRYD L+ +
Sbjct: 1793 QMINIIPRFLLDLSLIHNHQYYEGLVFQAY-IERPTLSNPSRTEIIMSGGRYDKLIKSLH 1851
Query: 1049 DREYVGYASRTNPPSGVGASLALETII 1075
+ N SGVG +LA E I+
Sbjct: 1852 PNPSLS----NNIVSGVGVTLACEKIV 1874
|
|
| POMBASE|SPBC36B7.09 gcn2 "eIF2 alpha kinase Gcn2" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 564 (203.6 bits), Expect = 1.4e-71, Sum P(3) = 1.4e-71
Identities = 222/772 (28%), Positives = 350/772 (45%)
Query: 470 SSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQI 528
SS + ++ V QEN L +T LYIQMEYC + +L+ + D + W LFRQI
Sbjct: 700 SSDKDSSIEEASSVKTQENGLNAT-LYIQMEYCEKLSLQDIIR--DKIPVDEMWRLFRQI 756
Query: 529 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXX 588
+E LA+IH +G++HRDL P NIF D ++K+GDFGLA + Q D + +
Sbjct: 757 LEALAYIHSRGMMHRDLKPGNIFLDENRNVKLGDFGLATENENYQ-DNNDKWKNRQSADE 815
Query: 589 XXXXXXXXXYFYTAPEI--EQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLK 646
Y APE+ + + D K DMYSLGI+ FE+ FST+MER ++ ++
Sbjct: 816 DLTTGVGTA-LYVAPELLSRRNGVRYDAKVDMYSLGIILFEMCMTFSTSMERIRIIDTIR 874
Query: 647 QKG-ELPPSW-VAKFSEQEXXXXXXXXXXXXXXXXATELLQ-DALPPQMEYELLDNILRM 703
P ++ ++ S + + ELL+ +A+PP++ E + LR+
Sbjct: 875 SPSISFPSTFPFSRASHEFKVIHCLLQHDPTKRPSSQELLESEAIPPKVGEEFIQEGLRL 934
Query: 704 MHSSEDTSIYDKVVSSIFDEETLDMKHHAGTLRLNRDNTSSI--QYSDL--DTEL----R 755
+ S+ +T Y K++ +F + + +H T N S + + SD D+ L R
Sbjct: 935 L-SNPNTPYYLKLLKVLFGQ--VPDRHKDFTYDFNLSEESGVLSKVSDRGWDSLLACLVR 991
Query: 756 DYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRN--TVKLLTHGGDLLELSHELRLPF 813
D+VV+V FR+H AK E E L Q+ ++ +V LL G LL+L ++ LP+
Sbjct: 992 DHVVKV----FRRHGAK--ERESHILFPKSSQYDKDQASVSLLDKNGTLLQLPYDTVLPY 1045
Query: 814 IRWAISNQKSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALT--EAEVLKVTMD 871
R N K Y IS V+R A G P + FDI + L +AE +K +
Sbjct: 1046 ARNVARNAVEEEKTYLISDVFREAKGGGRPKAIKEISFDITTNSDNLDWYDAETIKALDE 1105
Query: 872 IVTRFFH-AESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKW 930
++T ESC I +NH D+L +I + + + R +L + R S+
Sbjct: 1106 VLTEIPSLTESC-ILINHADILSSILDYLQVSKDKRRMATHILGQINQ-RLTLSQ----- 1158
Query: 931 VVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPT--RKALDEL-- 986
+R QL E + ++ L R ++ +LR + P R AL+ +
Sbjct: 1159 --VRNQLRIESLVPSTTLDDLSLFDFR--ENYEEGASKLRKIFGKEMPQKMRTALNYMER 1214
Query: 987 ---YLRIWRIEKNIYIDAL-MPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDY 1042
LR +I +Y L + E Y L FQ ++ EK L+ GGRYD
Sbjct: 1215 VVKLLRALKISHQLYFMPLCVYNFEFYDGGLMFQAINLAEK-------SELICAGGRYDK 1267
Query: 1043 LLHRMWDREYVGYASRTNPPSGVGASLALETII----------------QHYPVD-FKPV 1085
L+ R +D + A + + VG ALE ++ +H P K V
Sbjct: 1268 LV-RFFDPPLMRTARKKHV---VGICFALEKLVFSMLRYIRFHNSKQSSKHSPSPTLKSV 1323
Query: 1086 RNEAG--TSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDI 1143
A VLV S G +L E+ L+ ELW NI+A V SL E + I
Sbjct: 1324 GPWAPRRVDVLVTSIGKDSIL-EKCSLLQELWALNIQADIVLRGASSLEEIVTHYRSEGI 1382
Query: 1144 KCLVILTDTGAQ-KGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQFRNPSL 1194
++++ Q + VK R++ ++ E++ + + +LL I + RN S+
Sbjct: 1383 NWVLVVRQKNTQMEHSVKARNILKNEDDEIRFDEVGMWLLGEINERKRNESM 1434
|
|
| UNIPROTKB|E2RS10 EIF2AK4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 594 (214.2 bits), Expect = 2.1e-71, Sum P(4) = 2.1e-71
Identities = 202/715 (28%), Positives = 329/715 (46%)
Query: 494 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
YLYIQMEYC + TLR + + D W LFR+I++GLA+IH +G+IHRDL P NIF
Sbjct: 800 YLYIQMEYCEKSTLRDTIDQGLYQDTIRLWRLFREILDGLAYIHEKGMIHRDLKPVNIFL 859
Query: 553 DARNDIKIGDFGLAK---FLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIE-QG 608
D+ + +KIGDFGLA + D A Y +PE++
Sbjct: 860 DSDDHVKIGDFGLATDHLAFTADGKQDDTADHLIKSDPSGHLTGMVGTALYVSPEVQGSS 919
Query: 609 WPKIDEKADMYSLGIVFFEL-WHPFSTAMERQIVLSDLKQ--KGELPPSWV-AKFSEQEX 664
P ++K D++SLGI+FFE+ +HP TA ER VL+ L+ + P + + ++Q+
Sbjct: 920 RPTYNQKVDLFSLGIIFFEMSYHPMVTASERIFVLNQLRDPTSPKFPEDFDDGEHTKQKS 979
Query: 665 XXXXXXXXXXXXXXXATELLQDAL--PPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFD 722
ATELL+ L PPQME L +L ++ D Y +++ IF
Sbjct: 980 VISWLLNHDPAKRPTATELLKSELLPPPQMEESELHEVLHHTLANVDGKAYRTMMAQIFS 1039
Query: 723 EETLDMKHHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLL 782
+ + T N SI+ S + + D +V++ F++H A L P+ L
Sbjct: 1040 QRVSPAIDY--TYDSNMPKGFSIRTSKIQQHVCDTIVRI----FKKHGAVQL-CTPLLLP 1092
Query: 783 GDCPQFKRNTVKL-LTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYR-RAIGH 840
+ ++ N L + H G L+ L +LR+PF R+ N + KRY I V+R R +
Sbjct: 1093 QNRQIYEHNEAALFMDHSGMLVMLPFDLRVPFARYVARNNILNLKRYCIERVFRPRKLDR 1152
Query: 841 SPPNRYLQGDFDIIGGA--SALTEAEVLKVTMDIVTRF--FHAESCDIHLNHGDLLEAIW 896
P L+ FDI+ S+L AEV+ +I+ F + I+LNH LL+AI+
Sbjct: 1153 FHPKELLECAFDIVTSTTNSSLPTAEVIYTICEIIQEFPALQERNYSIYLNHTMLLKAIF 1212
Query: 897 SWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGL 956
GI + +V +L + + E ++K+ + L + + + L
Sbjct: 1213 LHCGIPEDKLSQVYVILYDAVTEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKGDLQDL 1272
Query: 957 RFCGAADQALPRLRGALPADKPTRKALDELY--LRIWRIEKNIYID-ALMPPIESYHRNL 1013
A + + + G K K L+E+ L+ I+ + I+ L+ ++ H +
Sbjct: 1273 T--PAINSLIKQKTGVAQLVKYGLKDLEEIIGLLKKLGIKLQVLINLGLVYKVQQ-HNGV 1329
Query: 1014 FFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALET 1073
FQ +V + + E +LA GGRYD L+ + + +G P+ VG S+A++
Sbjct: 1330 IFQFVAVIRRRQRAISE--ILAAGGRYDLLIPQFRGPQALGPV-----PTAVGVSIAIDK 1382
Query: 1074 IIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTE 1133
I +PV + +L+ S G + + L +LW I AQ + S E
Sbjct: 1383 ISAAILNMEEPV-TISSCDLLIVSVGQMSMS-RAINLTQKLWSAGITAQIMYDWSQSQEE 1440
Query: 1134 QYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1188
EY H+I + +++D G VK + + EK VQ L+ +L + ++
Sbjct: 1441 LQEYCRYHEITYVALVSDKGGSYVKVKSFEKERQTEKLVQESDLIDHVLQKLRTK 1495
|
|
| UNIPROTKB|Q9P2K8 EIF2AK4 "Eukaryotic translation initiation factor 2-alpha kinase 4" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 558 (201.5 bits), Expect = 2.4e-69, Sum P(3) = 2.4e-69
Identities = 195/721 (27%), Positives = 330/721 (45%)
Query: 494 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
YLYIQMEYC + TLR + + D W LFR+I++GLA+IH +G+IHRDL P NIF
Sbjct: 797 YLYIQMEYCEKSTLRDTIDQGLYRDTVRLWRLFREILDGLAYIHEKGMIHRDLKPVNIFL 856
Query: 553 DARNDIKIGDFGLAK---FLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGW 609
D+ + +KIGDFGLA + D Y +PE+ QG
Sbjct: 857 DSDDHVKIGDFGLATDHLAFSADSKQDDQTGDLIKSDPSGHLTGMVGTALYVSPEV-QGS 915
Query: 610 PK--IDEKADMYSLGIVFFEL-WHPFSTAMERQIVLSDLKQ--KGELPPSWV-AKFSEQE 663
K ++K D++SLGI+FFE+ +HP TA ER VL+ L+ + P + + ++Q+
Sbjct: 916 TKSAYNQKVDLFSLGIIFFEMSYHPMVTASERIFVLNQLRDPTSPKFPEDFDDGEHAKQK 975
Query: 664 XXXXXXXXXXXXXXXXATELLQDAL--PPQMEYELLDNILRMMHSSEDTSIYDKVVSSIF 721
ATELL+ L PPQME L +L ++ D Y +++ IF
Sbjct: 976 SVISWLLNHDPAKRPTATELLKSELLPPPQMEESELHEVLHHTLTNVDGKAYRTMMAQIF 1035
Query: 722 DEE---TLDMKHHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEP 778
+ +D + + L+ N +S +++ +V + +F++H A L P
Sbjct: 1036 SQRISPAIDYTYDSDILKGN--------FSIRTAKMQQHVCETIIRIFKRHGAVQL-CTP 1086
Query: 779 MYLLGDCPQFKRNTVKL-LTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYR-R 836
+ L + ++ N L + H G L+ L +LR+PF R+ N + KRY I V+R R
Sbjct: 1087 LLLPRNRQIYEHNEAALFMDHSGMLVMLPFDLRIPFARYVARNNILNLKRYCIERVFRPR 1146
Query: 837 AIGHSPPNRYLQGDFDIIGGA--SALTEAEVLKVTMDIVTRF--FHAESCDIHLNHGDLL 892
+ P L+ FDI+ S L AE++ +I+ F + I+LNH LL
Sbjct: 1147 KLDRFHPKELLECAFDIVTSTTNSFLPTAEIIYTIYEIIQEFPALQERNYSIYLNHTMLL 1206
Query: 893 EAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQ 952
+AI GI + +V +L + + E ++K+ + L + + +
Sbjct: 1207 KAILLHCGIPEDKLSQVYIILYDAVTEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKGD 1266
Query: 953 TVGLRFCGAADQALPRLRGALPADKPTRKALDELY--LRIWRIEKNIYID-ALMPPIESY 1009
L + + + G K K L+E+ L+ I+ + I+ L+ ++
Sbjct: 1267 LQDLM--PTINSLIKQKTGIAQLVKYGLKDLEEVVGLLKKLGIKLQVLINLGLVYKVQQ- 1323
Query: 1010 HRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASL 1069
H + FQ + ++ + E +LA GGRYD L+ + + +G P+ +G S+
Sbjct: 1324 HNGIIFQFVAFIKRRQRAVPE--ILAAGGRYDLLIPQFRGPQALGPV-----PTAIGVSI 1376
Query: 1070 ALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDP 1129
A++ I ++ + + +LV S G + + L +LW I A+ +
Sbjct: 1377 AIDKISAAV-LNMEESVTISSCDLLVVSVGQMSMS-RAINLTQKLWTAGITAEIMYDWSQ 1434
Query: 1130 SLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQF 1189
S E EY H+I + +++D VKV+ + KE++ ++ L L+D + +
Sbjct: 1435 SQEELQEYCRHHEITYVALVSDKEGSH--VKVKSFE--KERQTEKRVLETELVDHVLQKL 1490
Query: 1190 R 1190
R
Sbjct: 1491 R 1491
|
|
| MGI|MGI:1353427 Eif2ak4 "eukaryotic translation initiation factor 2 alpha kinase 4" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 561 (202.5 bits), Expect = 3.8e-69, Sum P(3) = 3.8e-69
Identities = 203/723 (28%), Positives = 332/723 (45%)
Query: 494 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
YLYIQMEYC + TLR + D W LFR+I++GLA+IH +G+IHRDL P NIF
Sbjct: 795 YLYIQMEYCEKSTLRDTIDQGLFRDTSRLWRLFREILDGLAYIHEKGMIHRDLKPVNIFL 854
Query: 553 DARNDIKIGDFGLAK----FLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQG 608
D+ + +KIGDFGLA F + D A Y +PE+ QG
Sbjct: 855 DSDDHVKIGDFGLATDHLAFTAEGKQDDQAGDGVIKSDPSGHLTGMVGTALYVSPEV-QG 913
Query: 609 WPK--IDEKADMYSLGIVFFEL-WHPFSTAMERQIVLSDLKQ--KGELPPSWV-AKFSEQ 662
K ++K D++SLGI+FFE+ +HP TA ER VL+ L+ + P + + ++Q
Sbjct: 914 STKSAYNQKVDLFSLGIIFFEMSYHPMVTASERIFVLNQLRDPTSPKFPDDFDDGEHTKQ 973
Query: 663 EXXXXXXXXXXXXXXXXATELLQDAL--PPQMEYELLDNILRMMHSSEDTSIYDKVVSSI 720
+ A ELL+ L PPQME L +L ++ D Y ++S I
Sbjct: 974 KSVISWLLNHDPAKRPTAMELLKSELLPPPQMEESELHEVLHHTLANIDGKAYRTMMSQI 1033
Query: 721 FDEE---TLDMKHHAGTLRLN-RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEI 776
F + +D + + L+ N T+ IQ +T +V+V F++H A L
Sbjct: 1034 FCQHISPAIDYTYDSDILKGNFLIRTAKIQQLVCET-----IVRV----FKRHGAVQL-C 1083
Query: 777 EPMYLLGDCPQFKRNTVKL-LTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYR 835
P+ L + ++ N L + H G L+ L +LR+PF R+ N + KRY I V+R
Sbjct: 1084 TPLLLPRNRQIYEHNEAALFMDHSGMLVMLPFDLRVPFARYVARNNILNLKRYCIERVFR 1143
Query: 836 -RAIGHSPPNRYLQGDFDIIGGA--SALTEAEVLKVTMDIVTRF--FHAESCDIHLNHGD 890
R + P L+ FDI+ S+L AE + +I+ F + I+LNH
Sbjct: 1144 PRKLDRFHPKELLECAFDIVTSTTNSSLPTAETIYTIYEIIQEFPALQERNYSIYLNHTM 1203
Query: 891 LLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNR 950
LL+AI GI + +V +L + + E ++K+ + L + + +
Sbjct: 1204 LLKAILLHCGIPEDKLSQVYVILYDAVTEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQK 1263
Query: 951 LQTVGLRFCGAADQALPRLRGALPADKPTRKALDELY--LRIWRIEKNIYID-ALMPPIE 1007
L + + + G K + K L+++ L+ ++ + I+ L+ ++
Sbjct: 1264 GDLQDLT--PTINSLIKQKTGVAQLVKYSLKDLEDVVGLLKKLGVKLQVSINLGLVYKVQ 1321
Query: 1008 SYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGA 1067
H + FQ + ++ + E +LA GGRYD L+ + + VG P+ VG
Sbjct: 1322 Q-HTGIIFQFLAFSKRRQRVVPE--ILAAGGRYDLLIPKFRGPQTVGPV-----PTAVGV 1373
Query: 1068 SLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVP 1127
S+A++ I +PV + +LV S G + + L +LW I A+ +
Sbjct: 1374 SIAIDKIFAAVLNMEEPV-TVSSCDLLVVSVGQMSMS-RAINLTQKLWTAGITAEIMYDW 1431
Query: 1128 DPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1187
S E EY H+I + +++D VKV+ + KE++ ++ L L+D +
Sbjct: 1432 SQSQEELQEYCRHHEITYVALVSDKEGSH--VKVKSFE--KERQTEKRVLESDLVDHVMQ 1487
Query: 1188 QFR 1190
+ R
Sbjct: 1488 KLR 1490
|
|
| UNIPROTKB|D4A7V9 Eif2ak4 "Protein Eif2ak4" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 556 (200.8 bits), Expect = 1.1e-68, Sum P(3) = 1.1e-68
Identities = 200/723 (27%), Positives = 332/723 (45%)
Query: 494 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
YLYIQMEYC + TLR + D W LFR+I++GLA+IH +G+IHRDL P NIF
Sbjct: 796 YLYIQMEYCEKSTLRDTIDQGLFRDTSRLWRLFREILDGLAYIHEKGMIHRDLKPVNIFL 855
Query: 553 DARNDIKIGDFGLAK----FLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQG 608
D+ + +KIGDFGLA F + D A Y +PE+ QG
Sbjct: 856 DSDDHVKIGDFGLATDHLAFNAEGKQDDQAGDHVIKSDPSGHLTGMVGTALYVSPEV-QG 914
Query: 609 WPK--IDEKADMYSLGIVFFEL-WHPFSTAMERQIVLSDLKQ--KGELPPSWV-AKFSEQ 662
K ++K D++SLGI+ FE+ +HP TA ER VL+ L+ + P + + ++Q
Sbjct: 915 STKSAYNQKVDLFSLGIILFEMSYHPMVTASERIFVLNQLRDPTSPKFPDDFEDGEHTKQ 974
Query: 663 EXXXXXXXXXXXXXXXXATELLQDAL--PPQMEYELLDNILRMMHSSEDTSIYDKVVSSI 720
+ A ELL+ L PPQME L +L ++ D Y ++S +
Sbjct: 975 KSVISWLLNHDPAKRPTAMELLKSELLPPPQMEESELHEVLHHTLANTDGKAYRTMMSQL 1034
Query: 721 FDEET---LDMKHHAGTLRLN-RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEI 776
F + + +D + + L+ N T+ IQ +T +V+V F++H A L
Sbjct: 1035 FCQHSSPAIDYTYDSDILKGNFLIRTAKIQQLVCET-----IVRV----FKRHGAVQL-C 1084
Query: 777 EPMYLLGDCPQFKRNTVKL-LTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYR 835
P+ L + ++ N L + H G L+ L +LR+PF R+ N + KRY I V+R
Sbjct: 1085 TPLLLPRNRQIYEHNEAALFMDHSGMLVMLPFDLRVPFARYVARNNILNLKRYCIERVFR 1144
Query: 836 -RAIGHSPPNRYLQGDFDIIGGA--SALTEAEVLKVTMDIVTRF--FHAESCDIHLNHGD 890
R + P L+ FDI+ S+L AE + +++ F + I+LNH
Sbjct: 1145 PRKLDRFHPKELLECAFDIVTSTANSSLPTAETIYTIYEVIQEFPALQERNYSIYLNHTM 1204
Query: 891 LLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNR 950
LL+AI GI + +V +L + + E ++K+ + L + + +
Sbjct: 1205 LLKAILLHCGIPEDKLSQVYVILYDAVTEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQK 1264
Query: 951 LQTVGLRFCGAADQALPRLRGALPADKPTRKALDELY--LRIWRIEKNIYID-ALMPPIE 1007
L + + + G K + K L+E+ L+ ++ + I+ L+ ++
Sbjct: 1265 GDLQDLT--PTINSLIKQKTGIAQLVKYSLKDLEEVVGLLKKLGVKLQVSINLGLVYKVQ 1322
Query: 1008 SYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGA 1067
H + FQ + ++ + E +LA GGRYD L+ + + +G P+ VG
Sbjct: 1323 Q-HNGIIFQFLAFSKRRQRVVPE--ILAAGGRYDLLIPKFRGPQALGPV-----PTAVGV 1374
Query: 1068 SLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVP 1127
S+A++ I +PV + +LV S G + + L +LW I A+ +
Sbjct: 1375 SIAIDKIFAAVLNMGEPV-TVSSCDLLVVSAGQMSMS-RAINLTQKLWTAGITAEIMYDW 1432
Query: 1128 DPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1187
S E EY H+I + +++D VKV+ + KE++ ++ L L+D +
Sbjct: 1433 SQSQEELQEYCRHHEITYVALVSDKEGSH--VKVKSFE--KERQTEKRVLESDLVDHVMQ 1488
Query: 1188 QFR 1190
+ R
Sbjct: 1489 KLR 1491
|
|
| UNIPROTKB|E1BAL6 EIF2AK4 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 562 (202.9 bits), Expect = 2.0e-68, Sum P(3) = 2.0e-68
Identities = 196/720 (27%), Positives = 331/720 (45%)
Query: 494 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
YLYIQMEYC + TLR + + D W LFR+I++GLA+IH +G+IHRDL P NIF
Sbjct: 796 YLYIQMEYCEKSTLRDTIDQGLYRDTVRLWRLFREILDGLAYIHEKGMIHRDLKPVNIFL 855
Query: 553 DARNDIKIGDFGLAK----FLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQG 608
D+ + +KIGDFGLA F + D + Y +PE+ QG
Sbjct: 856 DSDDHVKIGDFGLATDHLAFAADGKQDDTSGDHLIKSDPSGHLTGMVGTALYVSPEV-QG 914
Query: 609 WPK--IDEKADMYSLGIVFFEL-WHPFSTAMERQIVLSDLKQ--KGELPPSWV-AKFSEQ 662
K ++K D++SLGI+FFE+ +HP TA ER VL+ L+ + P + + ++Q
Sbjct: 915 STKSAYNQKVDLFSLGIIFFEMSYHPMVTASERIFVLNQLRDPTSPKFPEDFDDGEHTKQ 974
Query: 663 EXXXXXXXXXXXXXXXXATELLQDAL--PPQMEYELLDNILRMMHSSEDTSIYDKVVSSI 720
+ ATELL+ L PPQME L +L ++ D Y ++ I
Sbjct: 975 KSVISWLLNHDPAKRPTATELLKSELLPPPQMEESELHEVLHHTLANVDGKAYRTMMGQI 1034
Query: 721 FDEE---TLDMKHHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIE 777
F + +D + + L+ + SI+ + + + + ++++ F++H A L
Sbjct: 1035 FAQRISPAIDYTYDSDILK----GSFSIRTAKIQQHVCETIIRI----FKRHGAVQL-CT 1085
Query: 778 PMYLLGDCPQFKRNTVKL-LTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYR- 835
P+ L + ++ N L + H G L+ L +LR+PF R+ N + KRY I V+R
Sbjct: 1086 PLLLPRNRQIYEHNEAALFMDHSGMLVMLPFDLRVPFARYVARNNILNLKRYCIERVFRP 1145
Query: 836 RAIGHSPPNRYLQGDFDIIGGA--SALTEAEVLKVTMDIVTRF--FHAESCDIHLNHGDL 891
R + P L+ FDI+ S+L AE++ +I+ F + I+LNH L
Sbjct: 1146 RKLDRFHPKELLECAFDIVTSTTNSSLPTAEIIYTIYEIIQEFPALQERNYSIYLNHTML 1205
Query: 892 LEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRL 951
L+AI GI + +V +L + + E ++K+ + L + + +
Sbjct: 1206 LKAILLHCGIPEDKLSQVYVILYDAVTEKLTRREVEAKFCNLSLSSSSLCRLYKFIEQKG 1265
Query: 952 QTVGLRFCGAADQALPRLRGALPADKPTRKALDELY--LRIWRIEKNIYID-ALMPPIES 1008
+ L + + + G K K L+E+ L+ + I+ + I+ L+ ++
Sbjct: 1266 ELQDLT--PTINSLIKQKTGVAQLVKYGLKDLEEVVGLLKKFGIKLQVLINLGLVYKVQQ 1323
Query: 1009 YHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGAS 1068
H + FQ + + + E +LA GGRYD L+ + + +G P+ +G S
Sbjct: 1324 -HSGIIFQFVAFIRRRQRAISE--ILAAGGRYDLLIPQFRGPQALGPV-----PTAIGVS 1375
Query: 1069 LALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPD 1128
+A++ I +PV + +LV S G + + L +LW I A+ +
Sbjct: 1376 IAIDKITTAVLNMEEPV-TVSSCDLLVVSVGQMSMS-RAINLTQKLWSAGITAEIMYDWS 1433
Query: 1129 PSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1188
S E EY H+I + +++D VK D + EK V LV ++ + ++
Sbjct: 1434 QSQEELQEYCRHHEITYVALVSDKEGSHVKVKSFEKDRQTEKRVPESDLVDHVVQKLRTK 1493
|
|
| DICTYBASE|DDB_G0276829 ifkB "PEK family protein kinase IfkB" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 332 (121.9 bits), Expect = 3.2e-67, Sum P(4) = 3.2e-67
Identities = 126/507 (24%), Positives = 219/507 (43%)
Query: 599 FYTAPEI-EQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVA 657
FY PEI E+ K DMYSLGI+FFE+ F T MER +L DL+ + PP + +
Sbjct: 491 FYCCPEILEKNTKHYGTKVDMYSLGIIFFEMCFQFQTQMERSNILRDLRDNLKFPPGFES 550
Query: 658 KFSEQEXXXXXXXXXXXXXXXXATELLQDAL-PPQMEYELLDNILRMMHSSEDTSIYDKV 716
+Q +LL+ L P +ME ++L ++ + ++ S++ +
Sbjct: 551 TKPDQTQIIRSLLSRDPTQRPSTKQLLESGLLPSKMEDDILKEAIKTI-ANPTISLFSYL 609
Query: 717 VSSIFDEETLDMKHHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLE- 775
+ +F L H + L N S + + R+ +++F H + ++
Sbjct: 610 MEKLF---CLSNDEHIMSRYLYTSNPS---LTPMHLICREKTFSRLEKIFLNHGSIRIDT 663
Query: 776 --IEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSV 833
+ P N K L G ++ L ++L +P+ R + + KRY S V
Sbjct: 664 PTLFPKNPTNSTHPGAANVAKFLDESGTVVYLPYDLTIPWARHVVIHNIQQAKRYTFSKV 723
Query: 834 YRRAI-GHSPPNRYLQGDFDIIGGASA--LTEAEVLKVTMDIVTRF----FHAESCD--- 883
YRR+ G SP Y + DFDIIG + + +++AE L++ ++I+ F F S
Sbjct: 724 YRRSQPGFSPKELY-ECDFDIIGPSKSRHISDAETLRIIIEIMEEFKDELFGNNSGSNSG 782
Query: 884 ----------IHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVI 933
I +NH LL++I S G++ V + +A + W+ W +
Sbjct: 783 SGSGGSINYKIRINHYGLLDSILSECGVEKRFFTVVYQTVAQL--------HWRLNWAQV 834
Query: 934 RRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRI 993
Q L+E L+ ++V+ + T R G Q + +L L K + +L + + +
Sbjct: 835 A-QSLKEHGLSASIVSNISTY-FRQRGELAQCVTQLESLLANHKEATTGISDLKILVRNL 892
Query: 994 EK-NIY----IDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMW 1048
+ NI +D + Y+ L FQ + ++ + ++ GGRYD L+ +
Sbjct: 893 QMINIIPRFLLDLSLIHNHQYYEGLVFQAY-IERPTLSNPSRTEIIMSGGRYDKLIKSLH 951
Query: 1049 DREYVGYASRTNPPSGVGASLALETII 1075
+ N SGVG +LA E I+
Sbjct: 952 PNPSLS----NNIVSGVGVTLACEKIV 974
|
|
| RGD|1311439 Eif2ak4 "eukaryotic translation initiation factor 2 alpha kinase 4" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 556 (200.8 bits), Expect = 1.7e-66, Sum P(3) = 1.7e-66
Identities = 200/723 (27%), Positives = 332/723 (45%)
Query: 494 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
YLYIQMEYC + TLR + D W LFR+I++GLA+IH +G+IHRDL P NIF
Sbjct: 719 YLYIQMEYCEKSTLRDTIDQGLFRDTSRLWRLFREILDGLAYIHEKGMIHRDLKPVNIFL 778
Query: 553 DARNDIKIGDFGLAK----FLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQG 608
D+ + +KIGDFGLA F + D A Y +PE+ QG
Sbjct: 779 DSDDHVKIGDFGLATDHLAFNAEGKQDDQAGDHVIKSDPSGHLTGMVGTALYVSPEV-QG 837
Query: 609 WPK--IDEKADMYSLGIVFFEL-WHPFSTAMERQIVLSDLKQ--KGELPPSWV-AKFSEQ 662
K ++K D++SLGI+ FE+ +HP TA ER VL+ L+ + P + + ++Q
Sbjct: 838 STKSAYNQKVDLFSLGIILFEMSYHPMVTASERIFVLNQLRDPTSPKFPDDFEDGEHTKQ 897
Query: 663 EXXXXXXXXXXXXXXXXATELLQDAL--PPQMEYELLDNILRMMHSSEDTSIYDKVVSSI 720
+ A ELL+ L PPQME L +L ++ D Y ++S +
Sbjct: 898 KSVISWLLNHDPAKRPTAMELLKSELLPPPQMEESELHEVLHHTLANTDGKAYRTMMSQL 957
Query: 721 FDEET---LDMKHHAGTLRLN-RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEI 776
F + + +D + + L+ N T+ IQ +T +V+V F++H A L
Sbjct: 958 FCQHSSPAIDYTYDSDILKGNFLIRTAKIQQLVCET-----IVRV----FKRHGAVQL-C 1007
Query: 777 EPMYLLGDCPQFKRNTVKL-LTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYR 835
P+ L + ++ N L + H G L+ L +LR+PF R+ N + KRY I V+R
Sbjct: 1008 TPLLLPRNRQIYEHNEAALFMDHSGMLVMLPFDLRVPFARYVARNNILNLKRYCIERVFR 1067
Query: 836 -RAIGHSPPNRYLQGDFDIIGGA--SALTEAEVLKVTMDIVTRF--FHAESCDIHLNHGD 890
R + P L+ FDI+ S+L AE + +++ F + I+LNH
Sbjct: 1068 PRKLDRFHPKELLECAFDIVTSTANSSLPTAETIYTIYEVIQEFPALQERNYSIYLNHTM 1127
Query: 891 LLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNR 950
LL+AI GI + +V +L + + E ++K+ + L + + +
Sbjct: 1128 LLKAILLHCGIPEDKLSQVYVILYDAVTEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQK 1187
Query: 951 LQTVGLRFCGAADQALPRLRGALPADKPTRKALDELY--LRIWRIEKNIYID-ALMPPIE 1007
L + + + G K + K L+E+ L+ ++ + I+ L+ ++
Sbjct: 1188 GDLQDLT--PTINSLIKQKTGIAQLVKYSLKDLEEVVGLLKKLGVKLQVSINLGLVYKVQ 1245
Query: 1008 SYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGA 1067
H + FQ + ++ + E +LA GGRYD L+ + + +G P+ VG
Sbjct: 1246 Q-HNGIIFQFLAFSKRRQRVVPE--ILAAGGRYDLLIPKFRGPQALGPV-----PTAVGV 1297
Query: 1068 SLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVP 1127
S+A++ I +PV + +LV S G + + L +LW I A+ +
Sbjct: 1298 SIAIDKIFAAVLNMGEPV-TVSSCDLLVVSAGQMSMS-RAINLTQKLWTAGITAEIMYDW 1355
Query: 1128 DPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1187
S E EY H+I + +++D VKV+ + KE++ ++ L L+D +
Sbjct: 1356 SQSQEELQEYCRHHEITYVALVSDKEGSH--VKVKSFE--KERQTEKRVLESDLVDHVMQ 1411
Query: 1188 QFR 1190
+ R
Sbjct: 1412 KLR 1414
|
|
| UNIPROTKB|H0YME5 EIF2AK4 "Eukaryotic translation initiation factor 2-alpha kinase 4" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 555 (200.4 bits), Expect = 7.5e-65, Sum P(2) = 7.5e-65
Identities = 201/762 (26%), Positives = 347/762 (45%)
Query: 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFE 511
G +D + D G + S +F + S +D+ +N+ E++ QMEYC + TLR +
Sbjct: 535 GSSDDEDDDEDEHGGVFSQSFLPASDSESDIIF-DNEDENSKSQNQMEYCEKSTLRDTID 593
Query: 512 SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK---F 568
+ D W LFR+I++GLA+IH +G+IHRDL P NIF D+ + +KIGDFGLA
Sbjct: 594 QGLYRDTVRLWRLFREILDGLAYIHEKGMIHRDLKPVNIFLDSDDHVKIGDFGLATDHLA 653
Query: 569 LKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGWPK--IDEKADMYSLGIVFF 626
+ D Y +PE+ QG K ++K D++SLGI+FF
Sbjct: 654 FSADSKQDDQTGDLIKSDPSGHLTGMVGTALYVSPEV-QGSTKSAYNQKVDLFSLGIIFF 712
Query: 627 EL-WHPFSTAMERQIVLSDLKQ--KGELPPSWV-AKFSEQEXXXXXXXXXXXXXXXXATE 682
E+ +HP TA ER VL+ L+ + P + + ++Q+ ATE
Sbjct: 713 EMSYHPMVTASERIFVLNQLRDPTSPKFPEDFDDGEHAKQKSVISWLLNHDPAKRPTATE 772
Query: 683 LLQDAL--PPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEE---TLDMKHHAGTLRL 737
LL+ L PPQME L +L ++ D Y +++ IF + +D + + L+
Sbjct: 773 LLKSELLPPPQMEESELHEVLHHTLTNVDGKAYRTMMAQIFSQRISPAIDYTYDSDILKG 832
Query: 738 NRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKL-L 796
N +S +++ +V + +F++H A L P+ L + ++ N L +
Sbjct: 833 N--------FSIRTAKMQQHVCETIIRIFKRHGAVQL-CTPLLLPRNRQIYEHNEAALFM 883
Query: 797 THGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYR-RAIGHSPPNRYLQGDFDIIG 855
H G L+ L +LR+PF R+ N + KRY I V+R R + P L+ FDI+
Sbjct: 884 DHSGMLVMLPFDLRIPFARYVARNNILNLKRYCIERVFRPRKLDRFHPKELLECAFDIVT 943
Query: 856 GA--SALTEAEVLKVTMDIVTRF--FHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAE 911
S L AE++ +I+ F + I+LNH LL+AI GI + +V
Sbjct: 944 STTNSFLPTAEIIYTIYEIIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDKLSQVYI 1003
Query: 912 LLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRG 971
+L + + E ++K+ + L + + + L + + + G
Sbjct: 1004 ILYDAVTEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKGDLQDLM--PTINSLIKQKTG 1061
Query: 972 ALPADKPTRKALDELY--LRIWRIEKNIYID-ALMPPIESYHRNLFFQVFSVKEKYPATL 1028
K K L+E+ L+ I+ + I+ L+ ++ H + FQ + ++ +
Sbjct: 1062 IAQLVKYGLKDLEEVVGLLKKLGIKLQVLINLGLVYKVQQ-HNGIIFQFVAFIKRRQRAV 1120
Query: 1029 VEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNE 1088
E +LA GGRYD L+ + + +G P+ +G S+A++ I ++ +
Sbjct: 1121 PE--ILAAGGRYDLLIPQFRGPQALGPV-----PTAIGVSIAIDKISAAV-LNMEESVTI 1172
Query: 1089 AGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVI 1148
+ +LV S G + + L +LW I A+ + S E EY H+I + +
Sbjct: 1173 SSCDLLVVSVGQMSMS-RAINLTQKLWTAGITAEIMYDWSQSQEELQEYCRHHEITYVAL 1231
Query: 1149 LTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQFR 1190
++D VKV+ + KE++ ++ L L+D + + R
Sbjct: 1232 VSDKEGSH--VKVKSFE--KERQTEKRVLETELVDHVLQKLR 1269
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9LX30 | GCN2_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.6669 | 0.9749 | 0.9395 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00001939001 | SubName- Full=Chromosome chr5 scaffold_124, whole genome shotgun sequence; (1255 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| GSVIVG00026837001 | SubName- Full=Chromosome chr15 scaffold_40, whole genome shotgun sequence; (64 aa) | • | 0.489 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1196 | |||
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 9e-66 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 3e-59 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 7e-57 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 1e-53 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 6e-47 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 1e-39 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 3e-39 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 3e-36 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 7e-35 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 1e-34 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 1e-33 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 5e-33 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 8e-33 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 3e-32 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 1e-31 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 3e-31 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 4e-31 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 7e-31 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 8e-31 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 8e-31 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 9e-31 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 5e-30 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 2e-29 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 5e-29 | |
| PLN02972 | 763 | PLN02972, PLN02972, Histidyl-tRNA synthetase | 7e-29 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 2e-28 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 4e-28 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 2e-27 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 3e-27 | |
| cd08219 | 255 | cd08219, STKc_Nek3, Catalytic domain of the Protei | 5e-27 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 2e-26 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 2e-26 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 3e-26 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 3e-26 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 3e-26 | |
| COG0124 | 429 | COG0124, HisS, Histidyl-tRNA synthetase [Translati | 2e-25 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 6e-25 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 1e-24 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 1e-24 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 1e-24 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 1e-23 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 1e-23 | |
| cd08223 | 257 | cd08223, STKc_Nek4, Catalytic domain of the Protei | 3e-23 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 5e-23 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 5e-23 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 5e-23 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 5e-23 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 6e-23 | |
| cd05573 | 350 | cd05573, STKc_ROCK_NDR_like, Catalytic domain of R | 1e-22 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 1e-22 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 2e-22 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 7e-22 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 9e-22 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 2e-21 | |
| PTZ00266 | 1021 | PTZ00266, PTZ00266, NIMA-related protein kinase; P | 2e-21 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 7e-21 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 1e-20 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 2e-20 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 5e-20 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 6e-20 | |
| cd07854 | 342 | cd07854, STKc_MAPK4_6, Catalytic domain of the Ser | 2e-19 | |
| cd07837 | 295 | cd07837, STKc_CdkB_plant, Catalytic domain of the | 2e-19 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 4e-19 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 4e-19 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 4e-19 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 5e-19 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 5e-19 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 7e-19 | |
| PTZ00267 | 478 | PTZ00267, PTZ00267, NIMA-related protein kinase; P | 8e-19 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 1e-18 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 2e-18 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 7e-18 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 1e-17 | |
| cd05599 | 364 | cd05599, STKc_NDR_like, Catalytic domain of Nuclea | 3e-17 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 3e-17 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 4e-17 | |
| cd07855 | 334 | cd07855, STKc_ERK5, Catalytic domain of the Serine | 4e-17 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 5e-17 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 5e-17 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 5e-17 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 7e-17 | |
| cd05629 | 377 | cd05629, STKc_NDR_like_fungal, Catalytic domain of | 1e-16 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 1e-16 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 2e-16 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 2e-16 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 2e-16 | |
| cd07853 | 372 | cd07853, STKc_NLK, Catalytic domain of the Serine/ | 2e-16 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 2e-16 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 4e-16 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 4e-16 | |
| cd07858 | 337 | cd07858, STKc_TEY_MAPK_plant, Catalytic domain of | 5e-16 | |
| cd07879 | 342 | cd07879, STKc_p38delta_MAPK13, Catalytic domain of | 7e-16 | |
| cd08228 | 267 | cd08228, STKc_Nek6, Catalytic domain of the Protei | 1e-15 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 1e-15 | |
| cd07850 | 353 | cd07850, STKc_JNK, Catalytic domain of the Serine/ | 2e-15 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 2e-15 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 3e-15 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 5e-15 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 5e-15 | |
| cd07880 | 343 | cd07880, STKc_p38gamma_MAPK12, Catalytic domain of | 5e-15 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 2e-14 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 2e-14 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 2e-14 | |
| cd05574 | 316 | cd05574, STKc_phototropin_like, Catalytic domain o | 2e-14 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 2e-14 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 2e-14 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 4e-14 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 4e-14 | |
| cd06638 | 286 | cd06638, STKc_myosinIIIA, Catalytic domain of the | 4e-14 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 6e-14 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 6e-14 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 6e-14 | |
| cd00773 | 261 | cd00773, HisRS-like_core, Class II Histidinyl-tRNA | 6e-14 | |
| cd07876 | 359 | cd07876, STKc_JNK2, Catalytic domain of the Serine | 8e-14 | |
| cd07877 | 345 | cd07877, STKc_p38alpha_MAPK14, Catalytic domain of | 8e-14 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 9e-14 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 1e-13 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 1e-13 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 1e-13 | |
| cd06618 | 296 | cd06618, PKc_MKK7, Catalytic domain of the dual-sp | 1e-13 | |
| cd07878 | 343 | cd07878, STKc_p38beta_MAPK11, Catalytic domain of | 2e-13 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 2e-13 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 2e-13 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 4e-13 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 7e-13 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 8e-13 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 8e-13 | |
| cd07857 | 332 | cd07857, STKc_MPK1, Catalytic domain of the Serine | 8e-13 | |
| PRK00037 | 412 | PRK00037, hisS, histidyl-tRNA synthetase; Reviewed | 8e-13 | |
| cd05628 | 363 | cd05628, STKc_NDR1, Catalytic domain of the Protei | 9e-13 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 9e-13 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 1e-12 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 1e-12 | |
| cd06639 | 291 | cd06639, STKc_myosinIIIB, Catalytic domain of the | 2e-12 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 2e-12 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 2e-12 | |
| PHA03209 | 357 | PHA03209, PHA03209, serine/threonine kinase US3; P | 3e-12 | |
| cd05586 | 330 | cd05586, STKc_Sck1_like, Catalytic domain of Suppr | 3e-12 | |
| cd05603 | 321 | cd05603, STKc_SGK2, Catalytic domain of the Protei | 3e-12 | |
| cd06616 | 288 | cd06616, PKc_MKK4, Catalytic domain of the dual-sp | 4e-12 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 4e-12 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 4e-12 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 5e-12 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 5e-12 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 6e-12 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 6e-12 | |
| TIGR00442 | 397 | TIGR00442, hisS, histidyl-tRNA synthetase | 6e-12 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 7e-12 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 9e-12 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 1e-11 | |
| cd05614 | 332 | cd05614, STKc_MSK2_N, N-terminal catalytic domain | 1e-11 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 2e-11 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 2e-11 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 3e-11 | |
| PLN00181 | 793 | PLN00181, PLN00181, protein SPA1-RELATED; Provisio | 3e-11 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 3e-11 | |
| cd00859 | 91 | cd00859, HisRS_anticodon, HisRS Histidyl-anticodon | 4e-11 | |
| cd05627 | 360 | cd05627, STKc_NDR2, Catalytic domain of the Protei | 5e-11 | |
| cd05601 | 330 | cd05601, STKc_CRIK, Catalytic domain of the Protei | 5e-11 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 6e-11 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 6e-11 | |
| cd06645 | 267 | cd06645, STKc_MAP4K3, Catalytic domain of the Prot | 6e-11 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 6e-11 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 6e-11 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 6e-11 | |
| cd05633 | 279 | cd05633, STKc_GRK3, Catalytic domain of the Protei | 7e-11 | |
| cd05597 | 331 | cd05597, STKc_DMPK_like, Catalytic domain of Myoto | 1e-10 | |
| cd05609 | 305 | cd05609, STKc_MAST, Catalytic domain of the Protei | 1e-10 | |
| cd05624 | 331 | cd05624, STKc_MRCK_beta, Catalytic domain of the P | 1e-10 | |
| cd06646 | 267 | cd06646, STKc_MAP4K5, Catalytic domain of the Prot | 1e-10 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 2e-10 | |
| PHA03207 | 392 | PHA03207, PHA03207, serine/threonine kinase US3; P | 2e-10 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 3e-10 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 4e-10 | |
| cd05596 | 370 | cd05596, STKc_ROCK, Catalytic domain of the Protei | 4e-10 | |
| cd05621 | 370 | cd05621, STKc_ROCK2, Catalytic domain of the Prote | 4e-10 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 4e-10 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 8e-10 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 9e-10 | |
| cd05631 | 285 | cd05631, STKc_GRK4, Catalytic domain of the Protei | 1e-09 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 1e-09 | |
| cd05587 | 324 | cd05587, STKc_cPKC, Catalytic domain of the Protei | 1e-09 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 1e-09 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 2e-09 | |
| cd05598 | 376 | cd05598, STKc_LATS, Catalytic domain of the Protei | 2e-09 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 2e-09 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 3e-09 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 3e-09 | |
| cd05622 | 371 | cd05622, STKc_ROCK1, Catalytic domain of the Prote | 3e-09 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 3e-09 | |
| PHA03212 | 391 | PHA03212, PHA03212, serine/threonine kinase US3; P | 4e-09 | |
| PHA03211 | 461 | PHA03211, PHA03211, serine/threonine kinase US3; P | 4e-09 | |
| PTZ00036 | 440 | PTZ00036, PTZ00036, glycogen synthase kinase; Prov | 5e-09 | |
| cd05613 | 290 | cd05613, STKc_MSK1_N, N-terminal catalytic domain | 6e-09 | |
| cd05604 | 325 | cd05604, STKc_SGK3, Catalytic domain of the Protei | 6e-09 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 6e-09 | |
| cd05625 | 382 | cd05625, STKc_LATS1, Catalytic domain of the Prote | 8e-09 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 8e-09 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 9e-09 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 1e-08 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 1e-08 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 1e-08 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 2e-08 | |
| smart00591 | 107 | smart00591, RWD, domain in RING finger and WD repe | 2e-08 | |
| pfam05773 | 113 | pfam05773, RWD, RWD domain | 2e-08 | |
| cd05602 | 325 | cd05602, STKc_SGK1, Catalytic domain of the Protei | 2e-08 | |
| cd08216 | 314 | cd08216, PK_STRAD, Pseudokinase domain of STE20-re | 3e-08 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 3e-08 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 3e-08 | |
| cd05623 | 332 | cd05623, STKc_MRCK_alpha, Catalytic domain of the | 3e-08 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 5e-08 | |
| cd05626 | 381 | cd05626, STKc_LATS2, Catalytic domain of the Prote | 5e-08 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 7e-08 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 8e-08 | |
| pfam13393 | 308 | pfam13393, tRNA-synt_His, Histidyl-tRNA synthetase | 8e-08 | |
| cd05589 | 324 | cd05589, STKc_PKN, Catalytic domain of the Protein | 9e-08 | |
| cd07868 | 317 | cd07868, STKc_CDK8, Catalytic domain of the Serine | 9e-08 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 1e-07 | |
| PRK12292 | 391 | PRK12292, hisZ, ATP phosphoribosyltransferase regu | 1e-07 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 2e-07 | |
| cd05615 | 323 | cd05615, STKc_cPKC_alpha, Catalytic domain of the | 2e-07 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 2e-07 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 2e-07 | |
| cd07867 | 317 | cd07867, STKc_CDC2L6, Catalytic domain of Serine/T | 2e-07 | |
| cd05042 | 269 | cd05042, PTKc_Aatyk, Catalytic domain of the Prote | 3e-07 | |
| COG3705 | 390 | COG3705, HisZ, ATP phosphoribosyltransferase invol | 3e-07 | |
| TIGR03724 | 199 | TIGR03724, arch_bud32, Kae1-associated kinase Bud3 | 5e-07 | |
| PRK14879 | 211 | PRK14879, PRK14879, serine/threonine protein kinas | 5e-07 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 7e-07 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 8e-07 | |
| PHA03390 | 267 | PHA03390, pk1, serine/threonine-protein kinase 1; | 8e-07 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 9e-07 | |
| cd05607 | 277 | cd05607, STKc_GRK7, Catalytic domain of the Protei | 9e-07 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 1e-06 | |
| cd05585 | 312 | cd05585, STKc_YPK1_like, Catalytic domain of Yeast | 1e-06 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 2e-06 | |
| cd06622 | 286 | cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of | 2e-06 | |
| TIGR00443 | 313 | TIGR00443, hisZ_biosyn_reg, ATP phosphoribosyltran | 2e-06 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 2e-06 | |
| cd05576 | 237 | cd05576, STKc_RPK118_like, Catalytic domain of the | 2e-06 | |
| cd05588 | 329 | cd05588, STKc_aPKC, Catalytic domain of the Protei | 3e-06 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 3e-06 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 3e-06 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 4e-06 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 4e-06 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 5e-06 | |
| cd05595 | 323 | cd05595, STKc_PKB_beta, Catalytic domain of the Pr | 6e-06 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 6e-06 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 6e-06 | |
| PLN03225 | 566 | PLN03225, PLN03225, Serine/threonine-protein kinas | 6e-06 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 7e-06 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 7e-06 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 7e-06 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 7e-06 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 7e-06 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 9e-06 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 1e-05 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 1e-05 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 1e-05 | |
| COG3642 | 204 | COG3642, COG3642, Mn2+-dependent serine/threonine | 1e-05 | |
| cd05618 | 329 | cd05618, STKc_aPKC_iota, Catalytic domain of the P | 2e-05 | |
| cd05571 | 323 | cd05571, STKc_PKB, Catalytic domain of the Protein | 2e-05 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 2e-05 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 4e-05 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 6e-05 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 7e-05 | |
| cd05116 | 257 | cd05116, PTKc_Syk, Catalytic domain of the Protein | 8e-05 | |
| PHA03210 | 501 | PHA03210, PHA03210, serine/threonine kinase US3; P | 9e-05 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 1e-04 | |
| PTZ00426 | 340 | PTZ00426, PTZ00426, cAMP-dependent protein kinase | 1e-04 | |
| PRK09605 | 535 | PRK09605, PRK09605, bifunctional UGMP family prote | 1e-04 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 1e-04 | |
| cd05108 | 316 | cd05108, PTKc_EGFR, Catalytic domain of the Protei | 1e-04 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 1e-04 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 1e-04 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 1e-04 | |
| cd05115 | 257 | cd05115, PTKc_Zap-70, Catalytic domain of the Prot | 2e-04 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 2e-04 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 2e-04 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 3e-04 | |
| pfam03129 | 93 | pfam03129, HGTP_anticodon, Anticodon binding domai | 3e-04 | |
| PHA02882 | 294 | PHA02882, PHA02882, putative serine/threonine kina | 4e-04 | |
| PLN03224 | 507 | PLN03224, PLN03224, probable serine/threonine prot | 4e-04 | |
| cd05120 | 155 | cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot | 4e-04 | |
| PRK12420 | 423 | PRK12420, PRK12420, histidyl-tRNA synthetase; Prov | 6e-04 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 7e-04 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 7e-04 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 0.001 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 0.001 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 0.001 | |
| cd05106 | 374 | cd05106, PTKc_CSF-1R, Catalytic domain of the Prot | 0.001 | |
| cd05086 | 268 | cd05086, PTKc_Aatyk2, Catalytic domain of the Prot | 0.002 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 0.002 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 0.002 | |
| cd05087 | 269 | cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t | 0.003 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 0.003 | |
| COG4248 | 637 | COG4248, COG4248, Uncharacterized protein with pro | 0.003 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 222 bits (568), Expect = 9e-66
Identities = 87/309 (28%), Positives = 131/309 (42%), Gaps = 63/309 (20%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+E L+ LG G FG V L ++K G+ A+K I+ K K +RILRE+ L +L+H ++
Sbjct: 1 YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIK-KKKIKKDRERILREIKILKKLKHPNI 59
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
VR Y FE LY+ MEYC
Sbjct: 60 VRLY-DVFED---------------------------------------EDKLYLVMEYC 79
Query: 503 P-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 561
L + + ++ A RQI+ L ++H +GI+HRDL P NI D +K+
Sbjct: 80 EGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKGIVHRDLKPENILLDEDGHVKLA 139
Query: 562 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621
DFGLA+ L + T VGT Y APE+ G + D++SL
Sbjct: 140 DFGLARQLDPGEKL----------------TTFVGTPEYMAPEVLLG-KGYGKAVDIWSL 182
Query: 622 GIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDR 677
G++ +EL PF + + + + P S + + L+R+L+ P R
Sbjct: 183 GVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKDLIRKLLVKDPEKR 242
Query: 678 PSATELLQD 686
+A E LQ
Sbjct: 243 LTAEEALQH 251
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 204 bits (520), Expect = 3e-59
Identities = 91/312 (29%), Positives = 128/312 (41%), Gaps = 63/312 (20%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+E L+ LG G FG V K+K G+ AVK ++ + + + RE+ L RL H ++
Sbjct: 1 YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNI 60
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
VR FE +LY+ MEYC
Sbjct: 61 VRLI-DAFED---------------------------------------KDHLYLVMEYC 80
Query: 503 PRT-LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 561
L ++ A + QI+ GL ++H GIIHRDL P NI D +KI
Sbjct: 81 EGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNGIIHRDLKPENILLDENGVVKIA 140
Query: 562 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621
DFGLAK L S T VGT +Y APE+ G K D++SL
Sbjct: 141 DFGLAKKL---------------LKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSL 185
Query: 622 GIVFFEL---WHPFSTA-MERQIVLSDLKQKGELPPSWVAKFSEQE---SLLRRLMSPSP 674
G++ +EL PFS + Q+ L L S E L+++ ++ P
Sbjct: 186 GVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKDLIKKCLNKDP 245
Query: 675 SDRPSATELLQD 686
S RP+A E+LQ
Sbjct: 246 SKRPTAEEILQH 257
|
Length = 260 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 195 bits (498), Expect = 7e-57
Identities = 82/301 (27%), Positives = 128/301 (42%), Gaps = 90/301 (29%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 448
LG GGFG V L ++K G+ A+K I+ +D S + +LRE+ L +L H ++V+ Y
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLE-ELLREIEILKKLNHPNIVKLYGV 59
Query: 449 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLR 507
+ + +LY+ MEYC +L+
Sbjct: 60 FEDEN----------------------------------------HLYLVMEYCEGGSLK 79
Query: 508 QVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND-IKIGDFGL 565
+ + + ++ + QI+EGL ++H GIIHRDL P NI D+ N +K+ DFGL
Sbjct: 80 DLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGL 139
Query: 566 AKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVF 625
+K L VGT Y APE+ G EK+D++SLG++
Sbjct: 140 SKLL---------------TSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVIL 184
Query: 626 FELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685
+EL +LK L+R+++ P RPSA E+L+
Sbjct: 185 YEL--------------PELKD-----------------LIRKMLQKDPEKRPSAKEILE 213
Query: 686 D 686
Sbjct: 214 H 214
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 187 bits (478), Expect = 1e-53
Identities = 85/314 (27%), Positives = 134/314 (42%), Gaps = 70/314 (22%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
+E ++ +G G FG V L + K DG+ Y +K+I L + S + L EV L +L H +
Sbjct: 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPN 60
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
+++YY E+ E L I MEY
Sbjct: 61 IIKYY----------------------------------------ESFEEKGKLCIVMEY 80
Query: 502 CPR-TLRQVFESY----DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 556
L Q + F +E F Q+ L ++H + I+HRD+ P NIF +
Sbjct: 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNG 140
Query: 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616
+K+GDFG++K L VGT +Y +PE+ Q P + K+
Sbjct: 141 LVKLGDFGISK-----VLSSTVDL----------AKTVVGTPYYLSPELCQNKP-YNYKS 184
Query: 617 DMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGE-LPPSWVAKFSEQ-ESLLRRLMS 671
D++SLG V +EL HPF ++ L LK + +P +S + +L+ L+
Sbjct: 185 DIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPSQ----YSSELRNLVSSLLQ 240
Query: 672 PSPSDRPSATELLQ 685
P +RPS ++LQ
Sbjct: 241 KDPEERPSIAQILQ 254
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 168 bits (429), Expect = 6e-47
Identities = 91/307 (29%), Positives = 128/307 (41%), Gaps = 66/307 (21%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 448
LG G FG V L +K G AVK + L S + + RE+ LS LQH ++VRYY
Sbjct: 8 LGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY-- 65
Query: 449 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLR 507
G E E L I +EY +L
Sbjct: 66 ------------------------------------GSERDEEKNTLNIFLEYVSGGSLS 89
Query: 508 QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 567
+ + + + + RQI+EGLA++H GI+HRD+ NI D+ +K+ DFG AK
Sbjct: 90 SLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAK 149
Query: 568 FLKLEQLDQDAAFPTDTGGVSVDGTGQV-GTYFYTAPE-IEQGWPKIDEKADMYSLGIVF 625
L + +GTG V GT ++ APE I + AD++SLG
Sbjct: 150 RLG--------------DIETGEGTGSVRGTPYWMAPEVIRGE--EYGRAADIWSLGCTV 193
Query: 626 FELW---HPFSTAMERQIVLSDLKQKGELP--PSWVAKFSEQ-ESLLRRLMSPSPSDRPS 679
E+ P+S L + GE P P SE+ + LR+ + P RP+
Sbjct: 194 IEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEH---LSEEAKDFLRKCLRRDPKKRPT 250
Query: 680 ATELLQD 686
A ELLQ
Sbjct: 251 ADELLQH 257
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 147 bits (373), Expect = 1e-39
Identities = 83/311 (26%), Positives = 139/311 (44%), Gaps = 66/311 (21%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
DFE L +G G FG V K D R YA+K+I L + + + E L++L +
Sbjct: 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSY 60
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
++RYY+++ + G L I MEY
Sbjct: 61 IIRYYESFLDKGK----------------------------------------LNIVMEY 80
Query: 502 CPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
L ++ + ++ W F QI+ GLAH+H + I+HRD+ N+F DA +++
Sbjct: 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNV 140
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618
KIGD G+AK L + VGT +Y +PE+ + P +EK+D+
Sbjct: 141 KIGDLGVAKLL---------------SDNTNFANTIVGTPYYLSPELCEDKP-YNEKSDV 184
Query: 619 YSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQES-LLRRLMSPSP 674
++LG+V +E HPF + ++L + +G PP +S+Q + L+ + ++
Sbjct: 185 WALGVVLYECCTGKHPFDANNQGALILKII--RGVFPPV-SQMYSQQLAQLIDQCLTKDY 241
Query: 675 SDRPSATELLQ 685
RP +LL+
Sbjct: 242 RQRPDTFQLLR 252
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 146 bits (371), Expect = 3e-39
Identities = 89/324 (27%), Positives = 142/324 (43%), Gaps = 81/324 (25%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL-----KDKSLPVNDRILREVATLSR 436
D+E L+ +G G FG V + K DG+ K+I K+K V+ EV L
Sbjct: 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVS-----EVNILRE 55
Query: 437 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 496
L+H ++VRYY +R+ + LY
Sbjct: 56 LKHPNIVRYYD------------------------RIIDRSNQT--------------LY 77
Query: 497 IQMEYC-----PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH-----GQGIIHRDLT 546
I MEYC + +++ + + ++E W + Q++ L H G ++HRDL
Sbjct: 78 IVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLK 137
Query: 547 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 606
P NIF DA N++K+GDFGLAK L + T VGT +Y +PE
Sbjct: 138 PANIFLDANNNVKLGDFGLAKIL------GHDSSFAKT---------YVGTPYYMSPEQL 182
Query: 607 QGWPKIDEKADMYSLGIVFFE---LWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ- 662
DEK+D++SLG + +E L PF+ Q+ L+ ++G+ ++S +
Sbjct: 183 NHMS-YDEKSDIWSLGCLIYELCALSPPFTAR--NQLQLASKIKEGKFRR-IPYRYSSEL 238
Query: 663 ESLLRRLMSPSPSDRPSATELLQD 686
+++ +++ P RPS ELLQ
Sbjct: 239 NEVIKSMLNVDPDKRPSTEELLQL 262
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 137 bits (348), Expect = 3e-36
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 68/311 (21%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
FE L+ +G GGFG V ++K G+ A+K I+L+ S ++I+ E+ L + +H +
Sbjct: 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLE--SKEKKEKIINEIQILKKCKHPN 58
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
+V+YY ++ D +W I ME+
Sbjct: 59 IVKYYGSYL-------KKDELW---------------------------------IVMEF 78
Query: 502 CPR-TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
C +L+ + +S + + ++ +++++GL ++H GIIHRD+ NI + ++K
Sbjct: 79 CSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVK 138
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619
+ DFGL+ L + VGT ++ APE+ G P D KAD++
Sbjct: 139 LIDFGLSAQLSDTKARNTM----------------VGTPYWMAPEVINGKP-YDYKADIW 181
Query: 620 SLGIVFFELW-----HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 674
SLGI EL + M+ ++ G P + E + L++ + +P
Sbjct: 182 SLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSD--EFKDFLKKCLQKNP 239
Query: 675 SDRPSATELLQ 685
RP+A +LL+
Sbjct: 240 EKRPTAEQLLK 250
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 133 bits (337), Expect = 7e-35
Identities = 79/315 (25%), Positives = 137/315 (43%), Gaps = 68/315 (21%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
DF+ L+ LG G +G V K D + YA+K++ L S + + E+ L+ + H +
Sbjct: 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
++ Y +A+ L+ L I MEY
Sbjct: 61 IISYKEAF----------------------------------------LDGNKLCIVMEY 80
Query: 502 CP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 556
P + + + + ++ W +F Q++ GL +H Q I+HRDL NI A +
Sbjct: 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVAND 140
Query: 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616
+KIGD G++K LK ++ A Q+GT Y APE+ +G P K+
Sbjct: 141 LVKIGDLGISKVLK-----KNMAKT------------QIGTPHYMAPEVWKGRP-YSYKS 182
Query: 617 DMYSLGIVFFELWHPFSTAMERQIVLSDLKQK---GELPPSWVAKFSEQESLLRRLMSPS 673
D++SLG + +E+ F+ E + + DL+ K G+ PP + ++ +R ++
Sbjct: 183 DIWSLGCLLYEM-ATFAPPFEAR-SMQDLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVK 240
Query: 674 PSDRPSATELLQDAL 688
P RP+ ++L
Sbjct: 241 PKLRPNCDKILASPA 255
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 133 bits (338), Expect = 1e-34
Identities = 83/336 (24%), Positives = 130/336 (38%), Gaps = 89/336 (26%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL--KDKSLPVNDRILREVATLSRLQHQ 440
+E+L+ LG G +G V ++K G A+KKIRL +++ +P LRE++ L L+H
Sbjct: 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPST--ALREISLLKELKHP 58
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
++V+ DV E KL Y+ E
Sbjct: 59 NIVKLL-----------------------------------DVIHTERKL-----YLVFE 78
Query: 501 YCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
YC L++ + L + Q++ GLA+ H I+HRDL P NI + +K
Sbjct: 79 YCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLK 138
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619
+ DFGLA+ P T T +V T +Y APEI G D++
Sbjct: 139 LADFGLARAFG---------IPLRT------YTHEVVTLWYRAPEILLGSKHYSTAVDIW 183
Query: 620 SLGIVFFELW--HP-----------------FSTAMERQIV-LSDLKQKGELPPSWVAK- 658
S+G +F E+ P T E ++ L P + K
Sbjct: 184 SVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKD 243
Query: 659 ----FSEQES----LLRRLMSPSPSDRPSATELLQD 686
+ LL +++ +P+ R SA E L+
Sbjct: 244 LEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 1e-33
Identities = 84/296 (28%), Positives = 120/296 (40%), Gaps = 58/296 (19%)
Query: 392 GGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-VNDRILREVATLSRLQHQHVVRYYQAWF 450
G +G V L K K G YA+K I+ D D++L E LS+ Q +VV+ Y +
Sbjct: 4 GAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYS-- 61
Query: 451 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQV 509
F G LY+ MEY P L +
Sbjct: 62 ------FQGKK--------------------------------NLYLVMEYLPGGDLASL 83
Query: 510 FESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 569
E+ D+++A +IV L ++H GIIHRDL P+NI D+ +K+ DFGL+K
Sbjct: 84 LENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVG 143
Query: 570 KLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFE 627
+ + + + VGT Y APE+ QG K D +SLG + +E
Sbjct: 144 LVRRQINLNDDEKEDKRI-------VGTPDYIAPEVILGQGHSK---TVDWWSLGCILYE 193
Query: 628 L---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA 680
PF +I + L K E P V E L+ +L+ P P R A
Sbjct: 194 FLVGIPPFHGETPEEIFQNILNGKIE-WPEDVEVSDEAIDLISKLLVPDPEKRLGA 248
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 132 bits (331), Expect = 5e-33
Identities = 90/415 (21%), Positives = 143/415 (34%), Gaps = 74/415 (17%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND-RILREVATLSRLQHQ 440
+ L+ LG G FG V L +++ + A+K + K +S R LRE+ L+ L H
Sbjct: 1 SYRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHP 57
Query: 441 -HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
++V+ Y Q+ LY+ M
Sbjct: 58 PNIVKLYD------------------------------------FFQDEG----SLYLVM 77
Query: 500 EYCP-RTLRQVFESYDH---FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 555
EY +L + + + A + QI+ L ++H +GIIHRD+ P NI D
Sbjct: 78 EYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRD 137
Query: 556 ND-IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKI 612
+K+ DFGLAK L T VGT Y APE+ G
Sbjct: 138 GRVVKLIDFGLAKLLPDPGSTSSIPALPST---------SVGTPGYMAPEVLLGLSLAYA 188
Query: 613 DEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVA----------KF 659
+D++SLGI +EL PF LK ELP +A
Sbjct: 189 SSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELIS 248
Query: 660 SEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIYDKVVSS 719
LL++L++ P +R S++ L L ++ + D + S
Sbjct: 249 KAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESDLSDLLKPDDSAPLRLSLPPSL 308
Query: 720 IFDEETLDMKHHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHL 774
+L+ +G+ D+ S + + + L
Sbjct: 309 EALISSLNSLAISGSDLKLDDSNFSKELAPNGVSSSPHNSSSLLLSTASSKRSSL 363
|
Length = 384 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 127 bits (322), Expect = 8e-33
Identities = 86/314 (27%), Positives = 130/314 (41%), Gaps = 66/314 (21%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+ ++ LG G FG L + D K++ L S L E+ LS LQH ++
Sbjct: 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNI 61
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
+ YY + ++ L I+MEY
Sbjct: 62 IAYYNHF----------------------------------------MDDNTLLIEMEYA 81
Query: 503 PR-TLRQVFESYD--HFDKELA-WHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
TL F++E+ W+LF QIV +++IH GI+HRD+ NIF I
Sbjct: 82 NGGTLYDKIVRQKGQLFEEEMVLWYLF-QIVSAVSYIHKAGILHRDIKTLNIFLTKAGLI 140
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618
K+GDFG++K L E +V VGT +Y +PE+ QG K + K+D+
Sbjct: 141 KLGDFGISKILGSEYS----------MAETV-----VGTPYYMSPELCQG-VKYNFKSDI 184
Query: 619 YSLGIVFFE---LWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 675
++LG V +E L F +V+ ++ G P SE SL+ L+ P
Sbjct: 185 WALGCVLYELLTLKRTFDATNPLNLVVKIVQ--GNYTPVVSVYSSELISLVHSLLQQDPE 242
Query: 676 DRPSATELLQDALP 689
RP+A E+L L
Sbjct: 243 KRPTADEVLDQPLL 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 126 bits (319), Expect = 3e-32
Identities = 94/309 (30%), Positives = 128/309 (41%), Gaps = 64/309 (20%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 448
+G G FG V N G AVK+IR++D I E+ L L+H ++V+YY
Sbjct: 8 IGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYY-- 65
Query: 449 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLR 507
GV ++ +YI MEYC TL
Sbjct: 66 ----GV----------------------------------EVHREKVYIFMEYCSGGTLE 87
Query: 508 QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 567
++ E D+ + Q++EGLA++H GI+HRD+ P NIF D IK+GDFG A
Sbjct: 88 ELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAV 147
Query: 568 FLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE--KADMYSLGIVF 625
LK T T G V GT Y APE+ G AD++SLG V
Sbjct: 148 KLKN---------NTTTMGEEVQSL--AGTPAYMAPEVITGGKGKGHGRAADIWSLGCVV 196
Query: 626 FEL------WHPFSTAMERQIVLS-DLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP 678
E+ W E QI+ K +P S + E + L R + P RP
Sbjct: 197 LEMATGKRPWSELDN--EFQIMFHVGAGHKPPIPDS-LQLSPEGKDFLDRCLESDPKKRP 253
Query: 679 SATELLQDA 687
+A+ELLQ
Sbjct: 254 TASELLQHP 262
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 124 bits (314), Expect = 1e-31
Identities = 89/317 (28%), Positives = 139/317 (43%), Gaps = 74/317 (23%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
+D E ++ LG G G V ++K G+ YA+KKI + ++LRE+ TL +
Sbjct: 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEE-FRKQLLRELKTLRSCESP 59
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
+VV+ Y A+++ G + I +E
Sbjct: 60 YVVKCYGAFYKEG----------------------------------------EISIVLE 79
Query: 501 YCPR-TLRQVFESYDHF-DKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARND 557
Y +L + + + LA ++ RQI++GL ++H + IIHRD+ P+N+ +++ +
Sbjct: 80 YMDGGSLADLLKKVGKIPEPVLA-YIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGE 138
Query: 558 IKIGDFGLAKFLKLEQ-LDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE-K 615
+KI DFG++K LE LDQ F VGT Y +PE QG +
Sbjct: 139 VKIADFGISKV--LENTLDQCNTF--------------VGTVTYMSPERIQG--ESYSYA 180
Query: 616 ADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQK--GELPPSWVAK-FSEQ-ESLLRR 668
AD++SLG+ E PF Q +L Q PPS A+ FS + +
Sbjct: 181 ADIWSLGLTLLECALGKFPFLPP--GQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISA 238
Query: 669 LMSPSPSDRPSATELLQ 685
+ P RPSA ELLQ
Sbjct: 239 CLQKDPKKRPSAAELLQ 255
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 3e-31
Identities = 86/328 (26%), Positives = 131/328 (39%), Gaps = 77/328 (23%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRL----KDKSLPVNDRILREVAT 433
+DF+ + +G G F VVL K K + YA+K K +L K K + E
Sbjct: 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKY------VKIEKEV 54
Query: 434 LSRL-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLES 492
L+RL H +++ Y TF + +EN
Sbjct: 55 LTRLNGHPGIIKLY------------------------YTFQD----------EEN---- 76
Query: 493 TYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 551
LY +EY P L Q Y D++ +I+ L ++H +GIIHRDL P NI
Sbjct: 77 --LYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENIL 134
Query: 552 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ------VGTYFYTAPEI 605
D IKI DFG AK L + + T S + VGT Y +PE+
Sbjct: 135 LDKDMHIKITDFGTAKVLDPNSSPE-SNKGDATNIDSQIEKNRRRFASFVGTAEYVSPEL 193
Query: 606 --EQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSW--VAK 658
E+ + +D+++LG + +++ PF + E LK + PP++ AK
Sbjct: 194 LNEK---PAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYSFPPNFPPDAK 250
Query: 659 FSEQESLLRRLMSPSPSDRPSATELLQD 686
L+ +L+ P DR E +
Sbjct: 251 -----DLIEKLLVLDPQDRLGVNEGYDE 273
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 123 bits (312), Expect = 4e-31
Identities = 62/248 (25%), Positives = 99/248 (39%), Gaps = 55/248 (22%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
++ L +G G G V K++ G A+KK+ L+ + ++ LRE+ L QH +
Sbjct: 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPY 60
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
VV+ DV + + MEY
Sbjct: 61 VVKLL-----------------------------------DVF-----PHGSGFVLVMEY 80
Query: 502 CPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 560
P L +V + + R +++G+A++H GI+HRDL P N+ A +KI
Sbjct: 81 MPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKI 140
Query: 561 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620
DFGLA+ + QV T +Y APE+ G K D D+++
Sbjct: 141 ADFGLARLFS--------------EEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWA 186
Query: 621 LGIVFFEL 628
+G +F EL
Sbjct: 187 VGCIFAEL 194
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 122 bits (307), Expect = 7e-31
Identities = 87/319 (27%), Positives = 139/319 (43%), Gaps = 84/319 (26%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+ +++ +G G FG +L K+K DG+ Y +K+I + S + +EVA LS ++H ++
Sbjct: 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNI 61
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
V+Y QE+ E+ LYI M+YC
Sbjct: 62 VQY----------------------------------------QESFEENGNLYIVMDYC 81
Query: 503 PRTLRQVFESYDHF-------------DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 549
E D + D+ L W F QI L H+H + I+HRD+ N
Sbjct: 82 --------EGGDLYKKINAQRGVLFPEDQILDW--FVQICLALKHVHDRKILHRDIKSQN 131
Query: 550 IFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609
IF IK+GDFG+A+ L V + T +GT +Y +PEI +
Sbjct: 132 IFLTKDGTIKLGDFGIARVL--------------NSTVELARTC-IGTPYYLSPEICENR 176
Query: 610 PKIDEKADMYSLGIVFFE---LWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLL 666
P + K+D+++LG V +E L H F + +VL + +G PP + +L+
Sbjct: 177 P-YNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKII--RGSYPPVSSHYSYDLRNLV 233
Query: 667 RRLMSPSPSDRPSATELLQ 685
+L +P DRPS +L+
Sbjct: 234 SQLFKRNPRDRPSVNSILE 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 122 bits (309), Expect = 8e-31
Identities = 60/247 (24%), Positives = 98/247 (39%), Gaps = 56/247 (22%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+++L +G G +G V ++KL G A+KKI+L+ +S + LRE+ L L H ++
Sbjct: 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNI 60
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
+ DV + L Y+ E+
Sbjct: 61 I-----------------------------------KLLDVFRHKGDL-----YLVFEFM 80
Query: 503 PRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 561
L ++ + + L Q+++GLA H GI+HRDL P N+ + +K+
Sbjct: 81 DTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLA 140
Query: 562 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621
DFGLA+ T V T +Y APE+ G D++S+
Sbjct: 141 DFGLAR-----SFGSPVRPYTH----------YVVTRWYRAPELLLGDKGYSTPVDIWSV 185
Query: 622 GIVFFEL 628
G +F EL
Sbjct: 186 GCIFAEL 192
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 121 bits (307), Expect = 8e-31
Identities = 81/307 (26%), Positives = 125/307 (40%), Gaps = 74/307 (24%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 448
+G G FG V N G A+K+I L+ I++E+ L L+H ++V+Y +
Sbjct: 8 IGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGS 67
Query: 449 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLR 507
ET S LYI +EY +LR
Sbjct: 68 -IET---------------------------------------SDSLYIILEYAENGSLR 87
Query: 508 QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 567
Q+ + + F + L Q+++GLA++H QG+IHRD+ NI +K+ DFG+A
Sbjct: 88 QIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVA- 146
Query: 568 FLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFE 627
T VS D VGT ++ APE+ + +D++SLG E
Sbjct: 147 --------------TKLNDVSKDDASVVGTPYWMAPEVIEMSG-ASTASDIWSLGCTVIE 191
Query: 628 LWH---PFST-----AMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDRP 678
L P+ A+ R IV D LP S + + L + P+ RP
Sbjct: 192 LLTGNPPYYDLNPMAALFR-IVQDD---HPPLPEG----ISPELKDFLMQCFQKDPNLRP 243
Query: 679 SATELLQ 685
+A +LL+
Sbjct: 244 TAKQLLK 250
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 9e-31
Identities = 81/337 (24%), Positives = 127/337 (37%), Gaps = 84/337 (24%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+E L+P+G G +G V +K GR A+KKI L RILRE+ L L+H+++
Sbjct: 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENI 61
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
+ G+ D + F+ DV YI E
Sbjct: 62 I---------GLLDILRPP-------SPEDFN-------DV------------YIVTELM 86
Query: 503 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 562
L +V +S + + QI+ GL ++H +IHRDL P+NI ++ D+KI D
Sbjct: 87 ETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICD 146
Query: 563 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622
FGLA+ +D D T V T +Y APE+ + + D++S+G
Sbjct: 147 FGLAR-----GVDPDEDEKGFL-------TEYVVTRWYRAPELLLSSSRYTKAIDIWSVG 194
Query: 623 IVFFEL----------WH--------------------PFSTAMERQIVLSDLKQKGELP 652
+F EL + ++ R + S K+
Sbjct: 195 CIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKP---K 251
Query: 653 PSWVAKFSEQES----LLRRLMSPSPSDRPSATELLQ 685
F LL +++ P R +A E L
Sbjct: 252 KPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA 288
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 120 bits (304), Expect = 5e-30
Identities = 74/312 (23%), Positives = 130/312 (41%), Gaps = 70/312 (22%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
++ L+ +G G G V ++ G+ A+KK+RL+ ++ + I+ E+ + +H ++
Sbjct: 21 YKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNK---ELIINEILIMKDCKHPNI 77
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
V YY ++ L L++ MEY
Sbjct: 78 VDYYDSY----------------------------------------LVGDELWVVMEYM 97
Query: 503 PR-TLRQVFESYDHFDKE--LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
+L + E +A+ + R++++GL ++H Q +IHRD+ +NI +K
Sbjct: 98 DGGSLTDIITQNFVRMNEPQIAY-VCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVK 156
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619
+ DFG A L E+ + VGT ++ APE+ + K D++
Sbjct: 157 LADFGFAAQLTKEKSKR---------------NSVVGTPYWMAPEVIKRKD-YGPKVDIW 200
Query: 620 SLGIVFFELW--HP--FSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSP 674
SLGI+ E+ P R + L + KG P K+S + + L + + P
Sbjct: 201 SLGIMCIEMAEGEPPYLREPPLRALFL--ITTKGIPPLKNPEKWSPEFKDFLNKCLVKDP 258
Query: 675 SDRPSATELLQD 686
RPSA ELLQ
Sbjct: 259 EKRPSAEELLQH 270
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 118 bits (296), Expect = 2e-29
Identities = 92/316 (29%), Positives = 137/316 (43%), Gaps = 77/316 (24%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+E ++ +G G FG + L K K D H +K+I L + + +EV L++++H ++
Sbjct: 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNI 61
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
V ++ ++ E G L+I MEYC
Sbjct: 62 VTFFASFQENG----------------------------------------RLFIVMEYC 81
Query: 503 ------PRTLRQ---VFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 553
R RQ +F D+ L+W F QI GL HIH + I+HRD+ NIF
Sbjct: 82 DGGDLMKRINRQRGVLFSE----DQILSW--FVQISLGLKHIHDRKILHRDIKSQNIFLS 135
Query: 554 ARNDI-KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612
+ K+GDFG+A+ QL+ VGT +Y +PEI Q P
Sbjct: 136 KNGMVAKLGDFGIAR-----QLNDSMELAYTC----------VGTPYYLSPEICQNRP-Y 179
Query: 613 DEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRL 669
+ K D++SLG V +EL HPF Q+VL +G P + SL+ +L
Sbjct: 180 NNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKIC--QGYFAPISPNFSRDLRSLISQL 237
Query: 670 MSPSPSDRPSATELLQ 685
SP DRPS T +L+
Sbjct: 238 FKVSPRDRPSITSILK 253
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 116 bits (294), Expect = 5e-29
Identities = 82/300 (27%), Positives = 117/300 (39%), Gaps = 66/300 (22%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN--DRILREVATLSRLQHQHVVRYY 446
LG G FG V+L + K G+ YA+K ++ K K + + L E LSR+ H +V+ +
Sbjct: 1 LGKGSFGKVLLVRKKDTGKLYAMKVLK-KKKIIKRKEVEHTLTERNILSRINHPFIVKLH 59
Query: 447 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-T 505
A F+T LY+ +EY P
Sbjct: 60 YA-FQT---------------------------------------EEKLYLVLEYAPGGE 79
Query: 506 LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGL 565
L F +E A +IV L ++H GII+RDL P NI DA IK+ DFGL
Sbjct: 80 LFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGL 139
Query: 566 AKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVF 625
AK L T+T GT Y APE+ G + D +SLG++
Sbjct: 140 AKELS------SEGSRTNT---------FCGTPEYLAPEVLLGKG-YGKAVDWWSLGVLL 183
Query: 626 FEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 682
+E+ PF ++I LK P E L+ L+ P+ R +
Sbjct: 184 YEMLTGKPPFYAEDRKEIYEKILKDPLRFPEFL---SPEARDLISGLLQKDPTKRLGSGG 240
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|215525 PLN02972, PLN02972, Histidyl-tRNA synthetase | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 7e-29
Identities = 120/453 (26%), Positives = 203/453 (44%), Gaps = 64/453 (14%)
Query: 754 LRDYVVQVTKEMFRQHCAKHLEIEPMY-----LLGDCPQFKRNTVKLLTHGGDLLELSHE 808
+R+ + +F++H A L+ P++ L+G + + L GG+L L ++
Sbjct: 343 IREKAFSIITSVFKRHGATALDT-PVFELRETLMGKYGEDSKLIYDLADQGGELCSLRYD 401
Query: 809 LRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNR-----YLQGDFDIIGGASAL-TE 862
L +PF R+ N +SFKRY+I+ VYRR P++ + Q DFDI G + +
Sbjct: 402 LTVPFARYVAMNGITSFKRYQIAKVYRR----DNPSKGRYREFYQCDFDIAGVYEPMGPD 457
Query: 863 AEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQ 922
E++KV +++ ++ LNH LL+ + G+ EK + + + L Q
Sbjct: 458 FEIIKVLTELLDELDIGTY-EVKLNHRKLLDGMLEICGVPP---EKFRTICSSIDKLDKQ 513
Query: 923 SSEWKSKWVVIRRQLLQELNLAEAVVNRLQT-VGLRFCGAADQALPRLR---GALPADKP 978
S + +++++++E L+ +++ V R G + L +LR +
Sbjct: 514 S------FEQVKKEMVEEKGLSNETADKIGNFVKER--GPPLELLSKLRQEGSEFLGNAS 565
Query: 979 TRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTL----- 1033
+R ALDEL + +EK+ I ++ + S R L + Y + E
Sbjct: 566 SRAALDELEIMFKALEKSKAIGKIVFDL-SLARGL--------DYYTGVIYEAVFKGAQV 616
Query: 1034 --LAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALE---TIIQHYPVDFKPVRNE 1088
+A GGRYD L VG S P+ VG SL +E I++ + V
Sbjct: 617 GSIAAGGRYDNL---------VGMFSGKQVPA-VGVSLGIERVFAIMEQQEEEKSQVIRP 666
Query: 1089 AGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVI 1148
T VLV S G L ELV+ELW IKA++ + + A E I +V+
Sbjct: 667 TETEVLV-SIIGDDKLALAAELVSELWNAGIKAEY--KVSTRKAKHLKRAKESGIPWMVL 723
Query: 1149 LTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFL 1181
+ + KG VK+++L+ E+EV R V+ L
Sbjct: 724 VGEKELSKGFVKLKNLEAGVEEEVDRTCFVQEL 756
|
Length = 763 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 115 bits (291), Expect = 2e-28
Identities = 79/338 (23%), Positives = 132/338 (39%), Gaps = 90/338 (26%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS--LPVNDRILREVATLSRLQHQ 440
+E++ +G G +G V +NK G A+KKIR++++ P+ +RE+ L +L+H
Sbjct: 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPIT--AIREIKLLQKLRHP 58
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
++VR E + G +Y+ E
Sbjct: 59 NIVRLK----EIVTSKGKGS----------------------------------IYMVFE 80
Query: 501 YCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
Y L + +S + F + +Q++EGL ++H GI+HRD+ +NI + +K
Sbjct: 81 YMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLK 140
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619
+ DFGLA+ S D T +V T +Y PE+ G + + DM+
Sbjct: 141 LADFGLARPYTKRN--------------SADYTNRVITLWYRPPELLLGATRYGPEVDMW 186
Query: 620 SLGIVFFELWH-----PFSTAMERQIVL----------------------SDLKQKGELP 652
S+G + EL+ ST +E Q+ +LK K
Sbjct: 187 SVGCILAELFLGKPIFQGSTELE-QLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYK 245
Query: 653 PSWVAKFSEQES-----LLRRLMSPSPSDRPSATELLQ 685
F LL +L++ P R SA + LQ
Sbjct: 246 RRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 4e-28
Identities = 84/348 (24%), Positives = 128/348 (36%), Gaps = 107/348 (30%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
N +E L +G G +G V+ C+NK G A+KK + + V LREV L +L+H+
Sbjct: 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHE 60
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
++V +A+ R LY+ E
Sbjct: 61 NIVNLKEAF------------RR----------KGR------------------LYLVFE 80
Query: 501 YCPRTLRQVFESYD-----HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 555
Y RTL ++ E+ + W Q+++ +A+ H IIHRD+ P NI
Sbjct: 81 YVERTLLELLEASPGGLPPDAVRSYIW----QLLQAIAYCHSHNIIHRDIKPENILVSES 136
Query: 556 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615
+K+ DFG A+ L + T V T +Y APE+ G +
Sbjct: 137 GVLKLCDFGFARAL--------------RARPASPLTDYVATRWYRAPELLVGDTNYGKP 182
Query: 616 ADMYSLGIVFFELWHPFSTAMERQIV--LSDLKQ-------KGELPPSWVAKFS------ 660
D++++G + EL + SD+ Q G LPPS FS
Sbjct: 183 VDVWAIGCIMAEL------LDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFA 236
Query: 661 --------EQESLLRR---------------LMSPSPSDRPSATELLQ 685
+ ESL RR + P +R + ELLQ
Sbjct: 237 GVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 112 bits (283), Expect = 2e-27
Identities = 79/320 (24%), Positives = 133/320 (41%), Gaps = 70/320 (21%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-VNDRILREVATLSRLQ 438
L +F+ + +G G F V LDGR A+KK+++ + L+E+ L +L
Sbjct: 1 LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD 60
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
H +V++Y ++ E N+L I
Sbjct: 61 HPNVIKYLASFIE-----------------------------------NNELN-----IV 80
Query: 499 MEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 553
+E R ++ + + W F Q+ L H+H + I+HRD+ P N+F
Sbjct: 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFIT 140
Query: 554 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPK 611
A +K+GD GL +F + AA VGT +Y +PE E G+
Sbjct: 141 ATGVVKLGDLGLGRFFSSKTT---AAH------------SLVGTPYYMSPERIHENGY-- 183
Query: 612 IDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQK---GELPPSWVAKFSEQ-ESLLR 667
+ K+D++SLG + +E+ S ++ L L +K + PP +SE+ L+
Sbjct: 184 -NFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVS 242
Query: 668 RLMSPSPSDRPSATELLQDA 687
R ++P P RP + +LQ A
Sbjct: 243 RCINPDPEKRPDISYVLQVA 262
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 3e-27
Identities = 80/311 (25%), Positives = 129/311 (41%), Gaps = 74/311 (23%)
Query: 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD---KSLPVNDRILREVATLSRLQHQHVV 443
+ LG G FG V N DG +AVK++ L D ++ +E+A LS+LQH ++V
Sbjct: 6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIV 65
Query: 444 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP 503
+Y GT + E LYI +E P
Sbjct: 66 QYL-------------------GT---------------------EREEDNLYIFLELVP 85
Query: 504 R-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 562
+L ++ + Y F + + RQI+ GL ++H + +HRD+ NI D +K+ D
Sbjct: 86 GGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLAD 145
Query: 563 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI-----EQGWPKIDEKAD 617
FG+AK ++ + +F G+ ++ APE+ G AD
Sbjct: 146 FGMAK--QVVEFSFAKSF--------------KGSPYWMAPEVIAQQGGYGLA-----AD 184
Query: 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 674
++SLG E+ P+S V + + ELPP E + + + + P
Sbjct: 185 IWSLGCTVLEMATGKPPWSQLEGVAAVFK-IGRSKELPPIPDHLSDEAKDFILKCLQRDP 243
Query: 675 SDRPSATELLQ 685
S RP+A ELL+
Sbjct: 244 SLRPTAAELLE 254
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Score = 111 bits (278), Expect = 5e-27
Identities = 83/311 (26%), Positives = 135/311 (43%), Gaps = 69/311 (22%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
+ L+ +G G FG +L ++ + YA+K+IRL S V D +E L++++H +
Sbjct: 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDS-RKEAVLLAKMKHPN 59
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
+V + ++ F+ D +LYI MEY
Sbjct: 60 IVAFKES--------FEADG--------------------------------HLYIVMEY 79
Query: 502 CP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 556
C + ++ D L W F Q+ G+ HIH + ++HRD+ NIF
Sbjct: 80 CDGGDLMQKIKLQRGKLFPEDTILQW--FVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNG 137
Query: 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616
+K+GDFG A+ L T + T VGT +Y PEI + P + K+
Sbjct: 138 KVKLGDFGSARLL--------------TSPGAYACT-YVGTPYYVPPEIWENMP-YNNKS 181
Query: 617 DMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 673
D++SLG + +EL HPF + ++L +G P E SL++++ +
Sbjct: 182 DIWSLGCILYELCTLKHPFQANSWKNLILKVC--QGSYKPLPSHYSYELRSLIKQMFKRN 239
Query: 674 PSDRPSATELL 684
P RPSAT +L
Sbjct: 240 PRSRPSATTIL 250
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 2e-26
Identities = 86/322 (26%), Positives = 132/322 (40%), Gaps = 89/322 (27%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
F L+ +G G FG V +K + A+K I L++ + D I +E+ LS+ +
Sbjct: 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIED-IQQEIQFLSQCRSP 59
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
++ +YY GS F L+ + L+I ME
Sbjct: 60 YITKYY-----------------GS-------F----------------LKGSKLWIIME 79
Query: 501 YCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
YC + + + D+ + R+++ GL ++H +G IHRD+ NI D+K
Sbjct: 80 YCGGGSCLDLLKPGK-LDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVK 138
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADM 618
+ DFG++ L ++ F VGT F+ APE I+Q DEKAD+
Sbjct: 139 LADFGVSGQLTSTMSKRN-TF--------------VGTPFWMAPEVIKQS--GYDEKADI 181
Query: 619 YSLGIVFFEL---------WHPFSTAMERQIVLSDLKQKGELPPSWVA-KFSEQ-----E 663
+SLGI EL HP M ++ PPS KFS+
Sbjct: 182 WSLGITAIELAKGEPPLSDLHP----MRVLFLIPKNN-----PPSLEGNKFSKPFKDFVS 232
Query: 664 SLLRRLMSPSPSDRPSATELLQ 685
L + P +RPSA ELL+
Sbjct: 233 LCLNK----DPKERPSAKELLK 250
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 2e-26
Identities = 91/307 (29%), Positives = 136/307 (44%), Gaps = 63/307 (20%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR-------ILREVATLSRLQHQH 441
+G G FG V L N G AVK++ L S DR + RE+A L LQH++
Sbjct: 8 IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN 67
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
+V+Y L SS L++ +L I +EY
Sbjct: 68 IVQY----------------------LGSS------------------LDADHLNIFLEY 87
Query: 502 CPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 560
P ++ + +Y F++ L + RQI++GL ++H +GIIHRD+ NI D + IKI
Sbjct: 88 VPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKI 147
Query: 561 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620
DFG++K L+ L T T G G V F+ APE+ + KAD++S
Sbjct: 148 SDFGISKKLEANSLS------TKTNGARPSLQGSV---FWMAPEVVKQ-TSYTRKADIWS 197
Query: 621 LGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677
LG + E+ HPF + Q + + PS ++ SE L + + R
Sbjct: 198 LGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIPSNIS--SEAIDFLEKTFEIDHNKR 255
Query: 678 PSATELL 684
P+A ELL
Sbjct: 256 PTAAELL 262
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 3e-26
Identities = 80/315 (25%), Positives = 131/315 (41%), Gaps = 70/315 (22%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+E+++ +G G FG V LC+ K D + +K+I ++ + E L L H ++
Sbjct: 2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNI 61
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
+ YY EN LE L I MEY
Sbjct: 62 IEYY----------------------------------------ENFLEDKALMIVMEYA 81
Query: 503 P-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
P +++ S D++ H F QI+ L H+H + I+HRDL NI D
Sbjct: 82 PGGTLAEYIQKRCNSL--LDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKM 139
Query: 558 I-KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616
+ KIGDFG++K L + A+ VGT Y +PE+ +G P ++K+
Sbjct: 140 VVKIGDFGISKILS----SKSKAYTV------------VGTPCYISPELCEGKP-YNQKS 182
Query: 617 DMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 673
D+++LG V +EL F A +VL + G P + L+ +++
Sbjct: 183 DIWALGCVLYELASLKRAFEAANLPALVLKIM--SGTFAPISDRYSPDLRQLILSMLNLD 240
Query: 674 PSDRPSATELLQDAL 688
PS RP ++++ +
Sbjct: 241 PSKRPQLSQIMAQPI 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 108 bits (273), Expect = 3e-26
Identities = 83/306 (27%), Positives = 123/306 (40%), Gaps = 85/306 (27%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR----ILREVATLSRLQHQHVVR 444
LG GGFG V L K K R +A+K ++ K V I E L H +V+
Sbjct: 1 LGVGGFGRVELVKVKSKNRTFALKCVK---KRHIVETGQQEHIFSEKEILEECNHPFIVK 57
Query: 445 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP- 503
Y+ TF ++ Y+Y+ MEYC
Sbjct: 58 LYR------------------------TFKDKK----------------YIYMLMEYCLG 77
Query: 504 RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDF 563
L + FD+ A +V ++H +GII+RDL P N+ D+ +K+ DF
Sbjct: 78 GELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDF 137
Query: 564 GLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ-----VGTYFYTAPEIEQGWPK-IDEKAD 617
G AK LK +GQ GT Y APEI K D D
Sbjct: 138 GFAKKLK---------------------SGQKTWTFCGTPEYVAPEIILN--KGYDFSVD 174
Query: 618 MYSLGIVFFELWH---PFSTAMERQIVLSD--LKQKGELP-PSWVAKFSEQESLLRRLMS 671
+SLGI+ +EL PF E + + + LK G+L P+++ K + L+++L+
Sbjct: 175 YWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDK--AAKDLIKQLLR 232
Query: 672 PSPSDR 677
+P +R
Sbjct: 233 RNPEER 238
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 3e-26
Identities = 82/316 (25%), Positives = 129/316 (40%), Gaps = 75/316 (23%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKI--------RLKDKSLPVNDRILREVATLSRLQHQ 440
+G G +G V L N G AVK++ R + + + E+ TL L H
Sbjct: 9 IGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHL 68
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
++V+Y G E E YL I +E
Sbjct: 69 NIVQYL--------------------------------------GFETTEE--YLSIFLE 88
Query: 501 YCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
Y P ++ +Y F+++L Q++EGLA++H +GI+HRDL +N+ DA K
Sbjct: 89 YVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICK 148
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----EQGWPKIDEK 615
I DFG++K +D + G+ F+ APE+ QG+ K
Sbjct: 149 ISDFGISK-------------KSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGY---SAK 192
Query: 616 ADMYSLGIVFFELW---HPFST--AMERQIVLSDLKQKGELPPSWVAKFS-EQESLLRRL 669
D++SLG V E++ P+S A+ L + + +PP S L
Sbjct: 193 VDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNAC 252
Query: 670 MSPSPSDRPSATELLQ 685
+ +P +RP+A ELLQ
Sbjct: 253 FTINPDNRPTARELLQ 268
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|223202 COG0124, HisS, Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 2e-25
Identities = 100/456 (21%), Positives = 164/456 (35%), Gaps = 71/456 (15%)
Query: 751 DTELRDYVVQVTKEMFRQHCAK-----HLEIEPMYLLGDCPQFKRNTVKLL----THGGD 801
D LR+Y+ +++F + E ++ + K + GG
Sbjct: 17 DMALREYIESTIRKVFESYGFSEIRTPIFEYTELFARK-SGEETDVVEKEMYTFKDKGGR 75
Query: 802 LLELSHELRLPFIRWAISN---QKSSFKRYEISSVYRRAIGHSPP--NRY---LQGDFDI 853
L L EL P R N K Y V+R + P RY Q ++
Sbjct: 76 SLALRPELTAPVARAVAENKLDLPKPLKLYYFGPVFR----YERPQKGRYRQFYQFGVEV 131
Query: 854 IGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELL 913
IG S +AEV+ + ++I+ + +N +LE + GI + RE + L
Sbjct: 132 IGSDSPDADAEVIALAVEILEALG-IGGFTLEINSRGILEGRLEYLGI--DQREALLRYL 188
Query: 914 AMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQAL----PRL 969
K I + L E + N L+ L +DQ L P L
Sbjct: 189 --------------DKLDKIGKLELDEDSKRRLKTNPLRV--LDSKKDSDQELLKNAPEL 232
Query: 970 RGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPAT 1027
L D+ + + L+EL L I + ID + Y+ F+ +
Sbjct: 233 LDYL--DEESLEHLEELLALLDALGI--SYEIDPSLVRGLDYYTGTVFEAVTDGLG---- 284
Query: 1028 LVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPP-SGVGASLALETIIQHYPVDFKPVR 1086
+G++ GGRYD L+ P VG ++ +E +I + K
Sbjct: 285 -AQGSVCG-GGRYDGLVEEF-----------GGKPTPAVGFAIGVERLILALEEEGKEDP 331
Query: 1087 NEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCL 1146
E V V G E ++L +L I + V L +Q++YA + +
Sbjct: 332 VETRVDVYVVP-LGEDAEPEALKLAQKLRAAGISVE-VDYSGRKLKKQFKYADKLGARFA 389
Query: 1147 VILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLL 1182
VIL + G+V V+ L +++EV + LV L
Sbjct: 390 VILGEDELANGVVTVKDLATGEQEEVPLDELVEELK 425
|
Length = 429 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 6e-25
Identities = 84/330 (25%), Positives = 133/330 (40%), Gaps = 103/330 (31%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
F+ L+ LG G +G V +K G+ A+K + ++ I++E++ L +
Sbjct: 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVE----EDLQEIIKEISILKQCDSP 58
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
++V+YY GS F N T L+I ME
Sbjct: 59 YIVKYY-----------------GSY------FKN-----------------TDLWIVME 78
Query: 501 YCP------------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 548
YC +TL + +E+A L Q ++GL ++H IHRD+
Sbjct: 79 YCGAGSVSDIMKITNKTLTE---------EEIAAIL-YQTLKGLEYLHSNKKIHRDIKAG 128
Query: 549 NIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608
NI + K+ DFG++ QL D +T +GT F+ APE+ Q
Sbjct: 129 NILLNEEGQAKLADFGVS-----GQL-TDTMAKRNT---------VIGTPFWMAPEVIQE 173
Query: 609 WPKIDEKADMYSLGIVFFELWH---PFST--AMERQIVLSDLKQKGELPPSWVAKFSEQE 663
+ KAD++SLGI E+ P+S M R I + + K PP S+ E
Sbjct: 174 -IGYNNKADIWSLGITAIEMAEGKPPYSDIHPM-RAIFM--IPNK---PPP---TLSDPE 223
Query: 664 -------SLLRRLMSPSPSDRPSATELLQD 686
+++ + P +RPSA +LLQ
Sbjct: 224 KWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 1e-24
Identities = 76/317 (23%), Positives = 112/317 (35%), Gaps = 82/317 (25%)
Query: 386 LQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
+ LG G FG V K K G AVK ++ +D S + LRE + +L H +
Sbjct: 4 GKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLK-EDASEQQIEEFLREARIMRKLDHPN 62
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
VV+ GV E LYI MEY
Sbjct: 63 VVKLL------GVC----------------------------------TEEEPLYIVMEY 82
Query: 502 CPR-TLRQVFESYDHFDKELAWHLF-RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
L F QI G+ ++ + IHRDL N +K
Sbjct: 83 MEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVK 142
Query: 560 IGDFGLAKFLKLEQLD--QDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKA 616
I DFGL++ L + + P + APE +++G K K+
Sbjct: 143 ISDFGLSRDLYDDDYYRKRGGKLP----------------IRWMAPESLKEG--KFTSKS 184
Query: 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS- 671
D++S G++ +E++ P+ M + VL LK LP L LM
Sbjct: 185 DVWSFGVLLWEIFTLGEQPYP-GMSNEEVLEYLKNGYRLPQP-----PNCPPELYDLMLQ 238
Query: 672 ---PSPSDRPSATELLQ 685
P DRP+ +EL++
Sbjct: 239 CWAEDPEDRPTFSELVE 255
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 1e-24
Identities = 79/323 (24%), Positives = 119/323 (36%), Gaps = 93/323 (28%)
Query: 386 LQPLGHGGFGHVVLC--KNKLDGRHY--AVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
+ LG G FG V K K DG+ AVK ++ +D S + LRE + +L H +
Sbjct: 4 GKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLK-EDASEQQIEEFLREARIMRKLDHPN 62
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
+V+ GV T +E L I MEY
Sbjct: 63 IVKLL------GV----------------------------CTEEEP------LMIVMEY 82
Query: 502 CP--------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 553
P R R S A QI G+ ++ + IHRDL N
Sbjct: 83 MPGGDLLDYLRKNRPKELSLSDL-LSFAL----QIARGMEYLESKNFIHRDLAARNCLVG 137
Query: 554 ARNDIKIGDFGLAKFLKLEQLD--QDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWP 610
+KI DFGL++ L + + P + APE +++G
Sbjct: 138 ENLVVKISDFGLSRDLYDDDYYKVKGGKLP----------------IRWMAPESLKEG-- 179
Query: 611 KIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLL 666
K K+D++S G++ +E++ P+ M VL LK+ LP L
Sbjct: 180 KFTSKSDVWSFGVLLWEIFTLGEEPYP-GMSNAEVLEYLKKGYRLPKP-----PNCPPEL 233
Query: 667 RRLMS----PSPSDRPSATELLQ 685
+LM P DRP+ +EL++
Sbjct: 234 YKLMLQCWAEDPEDRPTFSELVE 256
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 1e-24
Identities = 78/320 (24%), Positives = 125/320 (39%), Gaps = 79/320 (24%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
+D E L LG G G V ++ G+ AVK IRL+ + +ILRE+ L +
Sbjct: 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINE-AIQKQILRELDILHKCNSP 59
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
++V +Y A++ +GD + I ME
Sbjct: 60 YIVGFYGAFYN------NGD----------------------------------ISICME 79
Query: 501 YCPRT-LRQVF-ESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARND 557
Y L ++ E + + + +++GL ++H + IIHRD+ P+NI ++R
Sbjct: 80 YMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQ 139
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ--VGTYFYTAPEIEQGWPKIDEK 615
IK+ DFG++ L V+ + VGT Y APE QG K
Sbjct: 140 IKLCDFGVSGQL-------------------VNSLAKTFVGTSSYMAPERIQG-NDYSVK 179
Query: 616 ADMYSLGIVFFEL-------WHPFSTAMERQIVLSDLKQ--KGELPPSWVAKFSEQ-ESL 665
+D++SLG+ EL + L+ P KFS +
Sbjct: 180 SDIWSLGLSLIELATGRFPYPPENDPPDG---IFELLQYIVNEPPPRLPSGKFSPDFQDF 236
Query: 666 LRRLMSPSPSDRPSATELLQ 685
+ + P +RPS ELL+
Sbjct: 237 VNLCLIKDPRERPSYKELLE 256
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 1e-23
Identities = 69/249 (27%), Positives = 110/249 (44%), Gaps = 59/249 (23%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+++++ +G G +G V ++KL G A+KKIRL+ + V +RE++ L L H ++
Sbjct: 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNI 60
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
VR DV ENKL Y+ E+
Sbjct: 61 VRLL-----------------------------------DVVHSENKL-----YLVFEFL 80
Query: 503 PRTLRQVFESYDHF--DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 560
L++ +S D L Q+++G+A+ H ++HRDL P N+ D +K+
Sbjct: 81 DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKL 140
Query: 561 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPEIEQGWPKIDEKADMY 619
DFGLA+ AF GV V T +V T +Y APEI G + D++
Sbjct: 141 ADFGLAR-----------AF-----GVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIW 184
Query: 620 SLGIVFFEL 628
S+G +F E+
Sbjct: 185 SIGCIFAEM 193
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 1e-23
Identities = 76/323 (23%), Positives = 131/323 (40%), Gaps = 78/323 (24%)
Query: 381 NDFEELQPLGHGGFGHV--VLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 438
+D+E ++ +G G V +C A+K+I L +K D + +EV +S+
Sbjct: 1 DDYELIEVIGVGATAVVYAAICLPN--NEKVAIKRIDL-EKCQTSVDELRKEVQAMSQCN 57
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
H +VV+YY ++ V G E L++
Sbjct: 58 HPNVVKYYTSF---------------------------------VVGDE-------LWLV 77
Query: 499 MEY-----CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 553
M Y ++ + D+ + + +++++GL ++H G IHRD+ NI
Sbjct: 78 MPYLSGGSLLDIMKSSY-PRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLG 136
Query: 554 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ--VGTYFYTAPEIEQGWPK 611
+KI DFG++ L GG + VGT + APE+ +
Sbjct: 137 EDGSVKIADFGVSASLA-------------DGGDRTRKVRKTFVGTPCWMAPEVMEQVHG 183
Query: 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW-----VAKFSEQ- 662
D KAD++S GI EL P+S ++++ L+ PPS K+S+
Sbjct: 184 YDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQND---PPSLETGADYKKYSKSF 240
Query: 663 ESLLRRLMSPSPSDRPSATELLQ 685
++ + PS RP+A ELL+
Sbjct: 241 RKMISLCLQKDPSKRPTAEELLK 263
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 3e-23
Identities = 77/308 (25%), Positives = 133/308 (43%), Gaps = 67/308 (21%)
Query: 386 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRY 445
++ +G G +G V L +++ DG+ Y +KK+ L++ S +E LS+L+H ++V Y
Sbjct: 5 VRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAY 64
Query: 446 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-- 503
++W + E LYI M +C
Sbjct: 65 RESW---------------------------------------EGEDGLLYIVMGFCEGG 85
Query: 504 ---RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 560
L++ ++ + W F QI L ++H + I+HRDL N+F N IK+
Sbjct: 86 DLYHKLKEQKGKLLPENQVVEW--FVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKV 143
Query: 561 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620
GD G+A+ L+ Q D + +GT +Y +PE+ P + K+D+++
Sbjct: 144 GDLGIARVLE-NQCDMASTL--------------IGTPYYMSPELFSNKP-YNYKSDVWA 187
Query: 621 LGIVFFE---LWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677
LG +E L H F+ +V + +G+LPP E L+ ++S P R
Sbjct: 188 LGCCVYEMATLKHAFNAKDMNSLVYRII--EGKLPPMPKDYSPELGELIATMLSKRPEKR 245
Query: 678 PSATELLQ 685
PS +L+
Sbjct: 246 PSVKSILR 253
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 5e-23
Identities = 95/380 (25%), Positives = 151/380 (39%), Gaps = 105/380 (27%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN-DRILREVATLSRLQH 439
N + +LQP+G G FG V +++L G++ A+KKI +K S PV R RE+ L L+H
Sbjct: 10 NRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKI-MKPFSTPVLAKRTYRELKLLKHLRH 68
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
++++ ++D F + VT +L T L+ +
Sbjct: 69 ENII---------SLSDI---------------FISPLEDIYFVT----ELLGTDLHRLL 100
Query: 500 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
P +K+ + QI+ GL ++H G++HRDL P+NI + D+K
Sbjct: 101 TSRP------------LEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLK 148
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619
I DFGLA+ QD TG V T +Y APEI W K D + D++
Sbjct: 149 ICDFGLARI-------QDPQM-----------TGYVSTRYYRAPEIMLTWQKYDVEVDIW 190
Query: 620 SLGIVFFELW------------HPFSTAME------------------RQIVLSDLKQKG 649
S G +F E+ + FS + + V S L ++
Sbjct: 191 SAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQS-LPKRE 249
Query: 650 ELPPSWVAKFSEQE--SLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSS 707
+P S K ++ LL +++ P R SA E L L H
Sbjct: 250 PVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA------------HPYLAPYHDP 297
Query: 708 EDTSIYDKVVSSIFDEETLD 727
D + ++ F++ L
Sbjct: 298 TDEPVAEEKFDWSFNDADLP 317
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 5e-23
Identities = 70/252 (27%), Positives = 114/252 (45%), Gaps = 60/252 (23%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
D+ +++ +G G +G V +NK G+ A+KKIRL+ + V +RE++ L LQH +
Sbjct: 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPN 60
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
+V DV QE++L Y+ E+
Sbjct: 61 IVCL-----------------------------------QDVLMQESRL-----YLIFEF 80
Query: 502 CPRTLRQVFESY---DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
L++ +S + D EL QI++G+ H + ++HRDL P N+ D + I
Sbjct: 81 LSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVI 140
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPEIEQGWPKIDEKAD 617
K+ DFGLA+ AF G+ V T +V T +Y APE+ G P+ D
Sbjct: 141 KLADFGLAR-----------AF-----GIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVD 184
Query: 618 MYSLGIVFFELW 629
++S+G +F E+
Sbjct: 185 IWSIGTIFAEMA 196
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 5e-23
Identities = 86/337 (25%), Positives = 132/337 (39%), Gaps = 88/337 (26%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+E+L+ +G G +G V KN+ A+K++RL D V LRE+ L L+H+++
Sbjct: 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 61
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
VR Y DV + KL + EYC
Sbjct: 62 VRLY-----------------------------------DVLHSDKKLT-----LVFEYC 81
Query: 503 PRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 561
+ L++ F+S + D E+ Q+++GLA H ++HRDL P N+ + ++K+
Sbjct: 82 DQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLA 141
Query: 562 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPEIEQGWPKIDEKADMYS 620
DFGLA+ AF G+ V + +V T +Y P++ G DM+S
Sbjct: 142 DFGLAR-----------AF-----GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWS 185
Query: 621 LGIVFFEL--------------------WHPFSTAMERQIV-LSDLKQKGELPP-----S 654
G +F EL + T E +S L P S
Sbjct: 186 AGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTS 245
Query: 655 WVAK----FSEQESLLRRLMSPSPSDRPSATELLQDA 687
V S LL+ L+ +P R SA E LQ
Sbjct: 246 LVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHP 282
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 5e-23
Identities = 79/317 (24%), Positives = 128/317 (40%), Gaps = 97/317 (30%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKK------IRLKDKSLPVNDRILREVATL 434
+DFE ++ LG G FG V+L ++K G++YA+K ++LK + +L E L
Sbjct: 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQV-----EHVLNEKRIL 55
Query: 435 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 494
++H +V Y +F Q++
Sbjct: 56 QSIRHPFLVNLY------------------------GSF------------QDDS----N 75
Query: 495 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 549
LY+ MEY P LR+ F + +A Q+V L ++H I++RDL P N
Sbjct: 76 LYLVMEYVPGGELFSHLRKS----GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPEN 131
Query: 550 IFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV-GTYFYTAPEIEQG 608
+ D+ IKI DFG AK +K T + GT Y APEI
Sbjct: 132 LLLDSDGYIKITDFGFAKRVK-------------------GRTYTLCGTPEYLAPEIILS 172
Query: 609 WPKIDEKADMYSLGIVFFEL---WHPFST----AMERQIVLSDLKQKGELPPSWVAKFSE 661
+ D ++LGI+ +E+ + PF + +I+ ++ PS+ FS
Sbjct: 173 KGY-GKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRF-----PSF---FSP 223
Query: 662 Q-ESLLRRLMSPSPSDR 677
+ L+R L+ + R
Sbjct: 224 DAKDLIRNLLQVDLTKR 240
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 99.5 bits (248), Expect = 6e-23
Identities = 86/330 (26%), Positives = 138/330 (41%), Gaps = 97/330 (29%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHY-AVKKI-----------RLKDKSLPVNDRILRE 430
+ L+ LG G FG V + K +G++ A+K+I R +DKS+ I+ E
Sbjct: 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSI---GDIVSE 58
Query: 431 VATL-SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENK 489
V + +L+H ++VRYY+ +
Sbjct: 59 VTIIKEQLRHPNIVRYYKTF---------------------------------------- 78
Query: 490 LESTYLYIQMEY---CPRTLRQVF----ESYDHFDKELAWHLFRQIVEGLAHIHGQG-II 541
LE+ LYI M+ P L + F E F +E W++F Q+V L ++H + I+
Sbjct: 79 LENDRLYIVMDLIEGAP--LGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIV 136
Query: 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYT 601
HRDLTPNNI + + I DFGLAK Q ++ T VGT Y+
Sbjct: 137 HRDLTPNNIMLGEDDKVTITDFGLAK-----QKQPESKL-----------TSVVGTILYS 180
Query: 602 APEIEQGWPKIDEKADMYSLGIVFFE---LWHPFSTA----MERQIVLSDLKQKGELPPS 654
PEI + P EKAD+++ G + ++ L PF + + +IV + P
Sbjct: 181 CPEIVKNEP-YGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIV------EAVYEPL 233
Query: 655 WVAKFSEQESLL-RRLMSPSPSDRPSATEL 683
+SE + + ++P RP ++
Sbjct: 234 PEGMYSEDVTDVITSCLTPDAEARPDIIQV 263
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 1e-22
Identities = 102/382 (26%), Positives = 154/382 (40%), Gaps = 86/382 (22%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
+DFE ++ +G G FG V L ++K G+ YA+K +R D +++ R Q
Sbjct: 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSD--------MIK------RNQIA 46
Query: 441 HVVRYYQAWFETGVADF--DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
HV E D D DS W S F Q+ + +LY+
Sbjct: 47 HV------RAER---DILADADSPWIVKLYYS--F------------QDEE----HLYLV 79
Query: 499 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
MEY P L + D F +E A ++V L +H G IHRD+ P+NI DA
Sbjct: 80 MEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGH 139
Query: 558 IKIGDFGLAK--------FLKLEQLDQDAAFPTDTGGVSVDGTGQ-------VGTYFYTA 602
IK+ DFGL K L + F + D + VGT Y A
Sbjct: 140 IKLADFGLCKKMNKAKDREYYLNDS-HNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIA 198
Query: 603 PEIEQGWPKIDEKADMYSLGIVFFELWH---PFS--TAMERQIVLSDLKQKGELPPSWVA 657
PE+ +G P + D +SLG++ +E+ + PF T E + + K+ PP
Sbjct: 199 PEVLRGTP-YGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPD--P 255
Query: 658 KFS-EQESLLRRLMSPSPSDR-PSATELLQDALPPQMEYELLDNILR-------MMHSSE 708
S E L+ RL+ P DR S E+ +++E N+ + S
Sbjct: 256 PVSPEAIDLICRLLCD-PEDRLGSFEEIKSHPFFKGIDWE---NLRETKPPFVPELSSPL 311
Query: 709 DTSIYDKVVSSIFDEETLDMKH 730
DTS +D F+++ +
Sbjct: 312 DTSNFDD-----FEDDKDLSDY 328
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 98.3 bits (246), Expect = 1e-22
Identities = 77/324 (23%), Positives = 125/324 (38%), Gaps = 87/324 (26%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDRILREVATLSRLQ 438
E + LG G FG V K DG AVK ++ + S + L E + + +L
Sbjct: 1 LELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLK-EGASEEEREEFLEEASIMKKLS 59
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
H ++VR GV T E LYI
Sbjct: 60 HPNIVRLL------GV----------------------------CTQGE------PLYIV 79
Query: 499 MEYCP----RT-LRQVFESYDHFDK-ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
EY P LR+ E D ++A QI +G+ ++ + +HRDL N
Sbjct: 80 TEYMPGGDLLDFLRKHGEKLTLKDLLQMAL----QIAKGMEYLESKNFVHRDLAARNCLV 135
Query: 553 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPK 611
+KI DFGL++ + + D G + + APE ++ G K
Sbjct: 136 TENLVVKISDFGLSRDI----------YEDDYYRKRGGGKLPI---KWMAPESLKDG--K 180
Query: 612 IDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQ 662
K+D++S G++ +E++ P+ M + VL L+ LP P + +
Sbjct: 181 FTSKSDVWSFGVLLWEIFTLGEQPYP-GMSNEEVLELLEDGYRLPRPENCPDELYE---- 235
Query: 663 ESLLRRLMSPSPSDRPSATELLQD 686
L+ + + P DRP+ +EL++D
Sbjct: 236 --LMLQCWAYDPEDRPTFSELVED 257
|
Length = 258 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 98.4 bits (246), Expect = 2e-22
Identities = 70/251 (27%), Positives = 101/251 (40%), Gaps = 64/251 (25%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRI-LREVATLSRLQ-HQ 440
++ ++ LG G FG V L +NK G A+KK +K K + + LREV +L +L H
Sbjct: 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKK--MKKKFYSWEECMNLREVKSLRKLNEHP 58
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
++V+ E E+ LY E
Sbjct: 59 NIVKLK----------------------------------------EVFRENDELYFVFE 78
Query: 501 YCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
Y L Q+ + F + + + QI++GLAHIH G HRDL P N+ +
Sbjct: 79 YMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVV 138
Query: 559 KIGDFGLAKFLKLEQLDQDAAFP-TDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617
KI DFGLA+ E + P TD V T +Y APEI D
Sbjct: 139 KIADFGLAR----EIRSRP---PYTD----------YVSTRWYRAPEILLRSTSYSSPVD 181
Query: 618 MYSLGIVFFEL 628
+++LG + EL
Sbjct: 182 IWALGCIMAEL 192
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 97.3 bits (243), Expect = 7e-22
Identities = 80/350 (22%), Positives = 133/350 (38%), Gaps = 115/350 (32%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP---VNDRILREVATLSRLQH 439
+E+ + LG G + V ++K GR A+KKI+L ++ +N LRE+ L L+H
Sbjct: 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKH 61
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
+++ DV G + + + +
Sbjct: 62 PNIIGLL-----------------------------------DVFGHK-----SNINLVF 81
Query: 500 EYCPRTLRQVFESYDHFDKEL--------AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 551
E+ L +V + DK + ++ L + GL ++H I+HRDL PNN+
Sbjct: 82 EFMETDLEKVIK-----DKSIVLTPADIKSYML--MTLRGLEYLHSNWILHRDLKPNNLL 134
Query: 552 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611
+ +K+ DFGLA+ F + + T QV T +Y APE+ G
Sbjct: 135 IASDGVLKLADFGLARS-----------FGSP----NRKMTHQVVTRWYRAPELLFGARH 179
Query: 612 IDEKADMYSLGIVFFELWHPFSTAMERQIVL---SDLKQKG------------------E 650
DM+S+G +F EL + R L SD+ Q G
Sbjct: 180 YGVGVDMWSVGCIFAEL-------LLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTS 232
Query: 651 LP----------PSWVAKFS----EQESLLRRLMSPSPSDRPSATELLQD 686
LP F + LL+RL++ +P+ R +A + L+
Sbjct: 233 LPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 96.2 bits (240), Expect = 9e-22
Identities = 75/326 (23%), Positives = 133/326 (40%), Gaps = 90/326 (27%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR--ILREVATLSRLQH 439
D+E +Q +G G +G V ++ G A+K I+L+ +D I +E++ L +H
Sbjct: 4 DYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG----DDFEIIQQEISMLKECRH 59
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
++V Y+ ++ L L+I M
Sbjct: 60 PNIVAYFGSY----------------------------------------LRRDKLWIVM 79
Query: 500 EYCP-RTLRQVF-ESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
EYC +L+ ++ + + ++ R+ ++GLA++H G IHRD+ NI D
Sbjct: 80 EYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGD 139
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKIDEK 615
+K+ DFG++ L + + +F +GT ++ APE+ + D K
Sbjct: 140 VKLADFGVSAQLT-ATIAKRKSF--------------IGTPYWMAPEVAAVERKGGYDGK 184
Query: 616 ADMYSLGIVFFELWHPFSTAMERQIVLSDLK---------QKGELPPS------WVAKFS 660
D+++LGI EL E Q + DL + PP W F
Sbjct: 185 CDIWALGITAIEL-------AELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVF- 236
Query: 661 EQESLLRRLMSPSPSDRPSATELLQD 686
+++ ++ P RP+AT+LLQ
Sbjct: 237 --HDFIKKCLTKDPKKRPTATKLLQH 260
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 95.8 bits (239), Expect = 2e-21
Identities = 66/256 (25%), Positives = 100/256 (39%), Gaps = 67/256 (26%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR--LKDKSLPVNDRILREVATLSRLQ-- 438
+EEL +G G +G V ++ GR A+KK+R L ++ +P++ LRE+A L +L+
Sbjct: 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLS--TLREIALLKQLESF 58
Query: 439 -HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
H ++VR DV L +
Sbjct: 59 EHPNIVRLL-----------------------------------DVCHGPRTDRELKLTL 83
Query: 498 QMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 555
E+ + L E L RQ++ G+ +H I+HRDL P NI +
Sbjct: 84 VFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSD 143
Query: 556 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615
+KI DFGLA+ + A T V T +Y APE+
Sbjct: 144 GQVKIADFGLARI-----YSFEMAL-----------TSVVVTLWYRAPEVLLQ----SSY 183
Query: 616 A---DMYSLGIVFFEL 628
A DM+S+G +F EL
Sbjct: 184 ATPVDMWSVGCIFAEL 199
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 2e-21
Identities = 87/338 (25%), Positives = 146/338 (43%), Gaps = 89/338 (26%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 439
LN++E ++ +G+G FG V L K+K + K I + +++ EV + L+H
Sbjct: 12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKH 71
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
+++VRY F N+A LYI M
Sbjct: 72 KNIVRYI------------------------DRFLNKANQK--------------LYILM 93
Query: 500 EYC-----PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH-------GQGIIHRDLTP 547
E+C R +++ ++ + ++ + RQ++ LA+ H G+ ++HRDL P
Sbjct: 94 EFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKP 153
Query: 548 NNIF-----------------FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 590
NIF + R KIGDFGL+K + +E +
Sbjct: 154 QNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSC------------ 201
Query: 591 GTGQVGTYFYTAPEIEQGWPK-IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLK 646
VGT +Y +PE+ K D+K+DM++LG + +EL PF A ++S+LK
Sbjct: 202 ----VGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELK 257
Query: 647 QKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 684
+ +LP K E L++ L++ S +RPSA + L
Sbjct: 258 RGPDLPIK--GKSKELNILIKNLLNLSAKERPSALQCL 293
|
Length = 1021 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 94.1 bits (234), Expect = 7e-21
Identities = 70/251 (27%), Positives = 110/251 (43%), Gaps = 63/251 (25%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H ++
Sbjct: 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 61
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
V+ DV ENKL Y+ E+
Sbjct: 62 VKLL-----------------------------------DVIHTENKL-----YLVFEFL 81
Query: 503 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
+ L++ ++ + L + Q+++GLA H ++HRDL P N+ + I
Sbjct: 82 HQDLKKFMDASP--LSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI 139
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPEIEQGWPKIDEKAD 617
K+ DFGLA+ AF GV V T +V T +Y APEI G D
Sbjct: 140 KLADFGLAR-----------AF-----GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 183
Query: 618 MYSLGIVFFEL 628
++SLG +F E+
Sbjct: 184 IWSLGCIFAEM 194
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 92.6 bits (230), Expect = 1e-20
Identities = 83/307 (27%), Positives = 124/307 (40%), Gaps = 69/307 (22%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRL----KDKSLPVNDRILREVATLSRLQHQHVVR 444
LG G FG V LC + GR AVK++ + VN + E+ L LQH+ +V+
Sbjct: 10 LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVN-ALECEIQLLKNLQHERIVQ 68
Query: 445 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 504
YY G L + L I MEY P
Sbjct: 69 YY-------------------GCLR---------------------DDETLSIFMEYMPG 88
Query: 505 -TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDF 563
+++ ++Y + + RQI+EG+ ++H I+HRD+ NI D+ ++K+GDF
Sbjct: 89 GSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDF 148
Query: 564 GLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623
G +K L+ TG SV GT ++ +PE+ G KAD++S+G
Sbjct: 149 GASKRLQTICSSG-------TGMKSV-----TGTPYWMSPEVISG-EGYGRKADVWSVGC 195
Query: 624 VFFEL------WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677
E+ W F AM ++ +LP LRR + R
Sbjct: 196 TVVEMLTEKPPWAEFE-AMAAIFKIATQPTNPQLPSHVSPDARN---FLRRTFVENAKKR 251
Query: 678 PSATELL 684
PSA ELL
Sbjct: 252 PSAEELL 258
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 92.0 bits (229), Expect = 2e-20
Identities = 66/304 (21%), Positives = 109/304 (35%), Gaps = 70/304 (23%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--RILREVATLSRLQHQ 440
FE L+ +G G FG V + + + + +A+K + K K + +L E L L H
Sbjct: 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMN-KQKCVEKGSVRNVLNERRILQELNHP 60
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
+V ++W +F + +Y+ ++
Sbjct: 61 FLV-----------------NLW-------YSFQDE----------------ENMYLVVD 80
Query: 501 YC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
LR F +E +IV L ++H +GIIHRD+ P+NI D + +
Sbjct: 81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVH 140
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619
I DF +A + + L T GT Y APE+ D +
Sbjct: 141 ITDFNIATKVTPDTL----------------TTSTSGTPGYMAPEVLCR-QGYSVAVDWW 183
Query: 620 SLGIVFFELWH---PF---STAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 673
SLG+ +E P+ S + QI P +W +E + +L+
Sbjct: 184 SLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATWS---TEAIDAINKLLERD 240
Query: 674 PSDR 677
P R
Sbjct: 241 PQKR 244
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 90.7 bits (226), Expect = 5e-20
Identities = 73/326 (22%), Positives = 117/326 (35%), Gaps = 96/326 (29%)
Query: 388 PLGHGGFGHVVLCK-NKLDGRHY--AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 444
LG G FG V K DG+ AVK ++ +D S L+E + +L H +VVR
Sbjct: 2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLK-EDASEEERKDFLKEARVMKKLGHPNVVR 60
Query: 445 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP- 503
GV + LY+ +EY
Sbjct: 61 LL------GVC---------------------------TEEEP-------LYLVLEYMEG 80
Query: 504 -------RTLRQVFESYDHFDKELAWHLF----RQIVEGLAHIHGQGIIHRDLTPNNIFF 552
R R VF S L+ QI +G+ ++ + +HRDL N
Sbjct: 81 GDLLDYLRKSRPVFPS--PEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLV 138
Query: 553 DARNDIKIGDFGLAKFLKLEQ---LDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQG 608
+KI DFGL++ + + P + APE ++ G
Sbjct: 139 GEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPI----------------RWMAPESLKDG 182
Query: 609 WPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQE 663
K+D++S G++ +E++ P+ + + VL L++ LP P +
Sbjct: 183 --IFTSKSDVWSFGVLLWEIFTLGATPYPG-LSNEEVLEYLRKGYRLPKPEYCPDE---- 235
Query: 664 SLLRRLM----SPSPSDRPSATELLQ 685
L LM P DRP+ +EL++
Sbjct: 236 --LYELMLSCWQLDPEDRPTFSELVE 259
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 92.1 bits (229), Expect = 6e-20
Identities = 74/352 (21%), Positives = 128/352 (36%), Gaps = 80/352 (22%)
Query: 370 PNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS--LPVNDRI 427
P ++ +E+L +G G FG V ++K + A+KK+ ++++ P+
Sbjct: 1 DQYEFPFCDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPIT--A 58
Query: 428 LREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQE 487
LRE+ L L+H++VV + T A+
Sbjct: 59 LREIKILQLLKHENVVNLIEI----------------CRTKAT---------------PY 87
Query: 488 NKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 546
N+ + ++ Y+ E+C L + + F + + ++ GL +IH I+HRD+
Sbjct: 88 NRYKGSF-YLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMK 146
Query: 547 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 606
NI +K+ DFGLA+ AF T +V T +Y PE+
Sbjct: 147 AANILITKDGILKLADFGLAR-----------AFSLSKNSKPNRYTNRVVTLWYRPPELL 195
Query: 607 QGWPKIDEKADMYSLGIVFFELW--HPFSTAMERQIVLS--------------------D 644
G DM+ G + E+W P Q L+ +
Sbjct: 196 LGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLE 255
Query: 645 LKQKGELPPS---WV-----AKFSEQES--LLRRLMSPSPSDRPSATELLQD 686
L +K ELP V + + L+ +L+ P+ R A L
Sbjct: 256 LFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Score = 91.0 bits (226), Expect = 2e-19
Identities = 70/255 (27%), Positives = 108/255 (42%), Gaps = 48/255 (18%)
Query: 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATL 434
SRY+ +L+PLG G G V + + AVKKI L D +S+ LRE+ +
Sbjct: 4 GSRYM----DLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSV---KHALREIKII 56
Query: 435 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 494
RL H ++V+ Y+ L S S + E
Sbjct: 57 RRLDHDNIVKVYEV-------------------LGPS-------GSDLTEDVGSLTELNS 90
Query: 495 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 554
+YI EY L V E +E A Q++ GL +IH ++HRDL P N+F +
Sbjct: 91 VYIVQEYMETDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT 149
Query: 555 RNDI-KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613
+ + KIGDFGLA+ +D + G +S + T +Y +P +
Sbjct: 150 EDLVLKIGDFGLARI-----VDPHY---SHKGYLSEG----LVTKWYRSPRLLLSPNNYT 197
Query: 614 EKADMYSLGIVFFEL 628
+ DM++ G +F E+
Sbjct: 198 KAIDMWAAGCIFAEM 212
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342 |
| >gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Score = 89.9 bits (223), Expect = 2e-19
Identities = 62/253 (24%), Positives = 101/253 (39%), Gaps = 57/253 (22%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH-QH 441
+E+L+ +G G +G V ++K G+ A+KK RL+ + LRE++ L L +
Sbjct: 3 YEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIY 62
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
+VR DV E K LY+ EY
Sbjct: 63 IVRLL-----------------------------------DVEHVEEKNGKPSLYLVFEY 87
Query: 502 CPRTLRQVFESY-----DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD-AR 555
L++ +S + Q+++G+AH H G++HRDL P N+ D +
Sbjct: 88 LDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQK 147
Query: 556 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615
+KI D GL + AF T ++ T +Y APE+ G
Sbjct: 148 GLLKIADLGLGR-----------AFSIPVKSY----THEIVTLWYRAPEVLLGSTHYSTP 192
Query: 616 ADMYSLGIVFFEL 628
D++S+G +F E+
Sbjct: 193 VDIWSVGCIFAEM 205
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 88.6 bits (219), Expect = 4e-19
Identities = 81/310 (26%), Positives = 130/310 (41%), Gaps = 72/310 (23%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILR---EVATLSRLQHQHVVRY 445
LG G FG V LC + GR A K+++ +S + + E+ L LQH+ +V+Y
Sbjct: 10 LGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQY 69
Query: 446 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR- 504
Y G L ++ E T L I MEY P
Sbjct: 70 Y-------------------GCL------------------RDRAEKT-LTIFMEYMPGG 91
Query: 505 TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFG 564
+++ ++Y + + RQI+EG++++H I+HRD+ NI D+ ++K+GDFG
Sbjct: 92 SVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFG 151
Query: 565 LAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ---VGTYFYTAPEIEQGWPKIDEKADMYSL 621
+K L+ + + GTG GT ++ +PE+ G KAD++SL
Sbjct: 152 ASKRLQT---------------ICMSGTGIRSVTGTPYWMSPEVISG-EGYGRKADVWSL 195
Query: 622 GIVFFEL------WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 675
G E+ W + AM ++ +LP + SE +
Sbjct: 196 GCTVVEMLTEKPPWAEYE-AMAAIFKIATQPTNPQLP----SHISEHARDFLGCIFVEAR 250
Query: 676 DRPSATELLQ 685
RPSA ELL+
Sbjct: 251 HRPSAEELLR 260
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 89.1 bits (221), Expect = 4e-19
Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 64/255 (25%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 439
++ +E+++ +G G +G V ++++ A+KKIRL+ + V +RE++ L +QH
Sbjct: 1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
++VR DV E +L Y+
Sbjct: 61 GNIVRLQ-----------------------------------DVVHSEKRL-----YLVF 80
Query: 500 EYCPRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDAR 555
EY L++ +S F K L + QI+ G+A+ H ++HRDL P N+ D R
Sbjct: 81 EYLDLDLKKHMDSSPDFAKNP--RLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRR 138
Query: 556 -NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPEIEQGWPKID 613
N +K+ DFGLA+ AF G+ V T +V T +Y APEI G
Sbjct: 139 TNALKLADFGLAR-----------AF-----GIPVRTFTHEVVTLWYRAPEILLGSRHYS 182
Query: 614 EKADMYSLGIVFFEL 628
D++S+G +F E+
Sbjct: 183 TPVDIWSVGCIFAEM 197
|
Length = 294 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 88.6 bits (220), Expect = 4e-19
Identities = 82/340 (24%), Positives = 126/340 (37%), Gaps = 92/340 (27%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRI-LREVATLSRLQHQH 441
+E+L +G G +G V C+N+ G+ A+KK ++ + PV +I LRE+ L +L+H +
Sbjct: 3 YEKLSKIGEGSYGVVFKCRNRETGQIVAIKKF-VESEDDPVIKKIALREIRMLKQLKHPN 61
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE----STYLYI 497
+V N +E L++
Sbjct: 62 LV--------------------------------------------NLIEVFRRKRKLHL 77
Query: 498 QMEYCPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 556
EYC T+ E + L + Q ++ + H IHRD+ P NI +
Sbjct: 78 VFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQG 137
Query: 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616
IK+ DFG A+ L TG D T V T +Y APE+ G +
Sbjct: 138 QIKLCDFGFARIL--------------TGP-GDDYTDYVATRWYRAPELLVGDTQYGPPV 182
Query: 617 DMYSLGIVFFE------LWHPFSTAMERQIVLSDLKQK-------GELPPSWVAKFSEQE 663
D++++G VF E LW P SD+ Q G+L P FS
Sbjct: 183 DVWAIGCVFAELLTGQPLW-PGK---------SDVDQLYLIRKTLGDLIPRHQQIFS-TN 231
Query: 664 SLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRM 703
+ L P P R + P + + L L+M
Sbjct: 232 QFFKGLSIPEPETREPLESKFPNISSPALSF--LKGCLQM 269
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 88.6 bits (220), Expect = 5e-19
Identities = 76/326 (23%), Positives = 132/326 (40%), Gaps = 82/326 (25%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
EL LG G G V C+ K G +A+K I D + + +ILRE+ +
Sbjct: 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTI-TTDPNPDLQKQILRELEINKSCKSP 59
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
++V+YY F + ++SS + I ME
Sbjct: 60 YIVKYY------------------------GAFLDESSSS--------------IGIAME 81
Query: 501 YCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 555
YC ++V + +++ + +++GL+++H + IIHRD+ P+NI +
Sbjct: 82 YCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRK 141
Query: 556 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP-KIDE 614
+K+ DFG++ L S+ GT GT FY APE QG P I
Sbjct: 142 GQVKLCDFGVSGEL----------------VNSLAGTF-TGTSFYMAPERIQGKPYSI-- 182
Query: 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSD------------LKQKGELPPSWVAKF 659
+D++SLG+ E+ PF E + + LK + W +F
Sbjct: 183 TSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEF 242
Query: 660 SEQESLLRRLMSPSPSDRPSATELLQ 685
+ +++ + P+ RP+ ++L+
Sbjct: 243 ---KDFIKQCLEKDPTRRPTPWDMLE 265
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 88.1 bits (218), Expect = 5e-19
Identities = 91/321 (28%), Positives = 139/321 (43%), Gaps = 90/321 (28%)
Query: 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVND-------RILREVATLSRLQ 438
Q LG G FG V L K+K AV + RLK K +PV + + +E LS+L
Sbjct: 6 QRLGKGSFGTVYLVKDK-----KAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLD 60
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
H +V+++ ++ E ++ I
Sbjct: 61 HPAIVKFHASFLE----------------------------------RDA------FCII 80
Query: 499 MEYCP-RTLRQVFESYDHFDKELA------WHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 551
EYC R L E H K L+ W F Q++ G+ ++H + I+HRDL NIF
Sbjct: 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEW--FIQLLLGVHYMHQRRILHRDLKAKNIF 138
Query: 552 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGW 609
N +KIGDFG+++ L G T GT +Y +PE QG+
Sbjct: 139 L-KNNLLKIGDFGVSRLLM---------------GSCDLATTFTGTPYYMSPEALKHQGY 182
Query: 610 PKIDEKADMYSLGIVFFE---LWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESL 665
D K+D++SLG + +E L H F +VL + +G PS +S Q S+
Sbjct: 183 ---DSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIV--EGP-TPSLPETYSRQLNSI 236
Query: 666 LRRLMSPSPSDRPSATELLQD 686
++ +++ PS RPSA E+L++
Sbjct: 237 MQSMLNKDPSLRPSAAEILRN 257
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 87.9 bits (218), Expect = 7e-19
Identities = 82/317 (25%), Positives = 132/317 (41%), Gaps = 79/317 (24%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH--- 439
++ L+ +G G +G V K+ GR A+K I L V+D I REVA LS+L+
Sbjct: 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSD-IQREVALLSQLRQSQP 61
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
++ +YY ++ L+ L+I M
Sbjct: 62 PNITKYYGSY----------------------------------------LKGPRLWIIM 81
Query: 500 EYCP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 555
EY RTL + ++ + R+++ L +IH G+IHRD+ NI
Sbjct: 82 EYAEGGSVRTLMKA----GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNT 137
Query: 556 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615
++K+ DFG+A A ++ S VGT ++ APE+ D K
Sbjct: 138 GNVKLCDFGVA-----------ALLNQNSSKRST----FVGTPYWMAPEVITEGKYYDTK 182
Query: 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS- 671
AD++SLGI +E+ P+S + ++ K K PP + + LLR ++
Sbjct: 183 ADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSK---PPR--LEDNGYSKLLREFVAA 237
Query: 672 ---PSPSDRPSATELLQ 685
P +R SA ELL+
Sbjct: 238 CLDEEPKERLSAEELLK 254
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 90.8 bits (225), Expect = 8e-19
Identities = 72/234 (30%), Positives = 114/234 (48%), Gaps = 38/234 (16%)
Query: 495 LYIQMEY-----CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 549
L + MEY + ++Q + + F + LF QIV L +H + ++HRDL N
Sbjct: 140 LLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSAN 199
Query: 550 IFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD-GTGQVGTYFYTAPEIEQG 608
IF IK+GDFG +K + VS+D + GT +Y APE+
Sbjct: 200 IFLMPTGIIKLGDFGFSK--------------QYSDSVSLDVASSFCGTPYYLAPEL--- 242
Query: 609 W--PKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQE 663
W + +KADM+SLG++ +EL PF +R+I+ L K + P V+ S +
Sbjct: 243 WERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFPCPVS--SGMK 300
Query: 664 SLLRRLMSPSPSDRPSATELLQDALPPQMEY--ELLDNILRMMHSSEDTSIYDK 715
+LL L+S +P+ RP+ +LL ++Y L +I+R SE S +D+
Sbjct: 301 ALLDPLLSKNPALRPTTQQLLHTEF---LKYVANLFQDIVR---HSETISPHDR 348
|
Length = 478 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 87.0 bits (215), Expect = 1e-18
Identities = 85/307 (27%), Positives = 134/307 (43%), Gaps = 66/307 (21%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILR---EVATLSRLQHQHVVRY 445
LG G FG V LC + GR AVK+++ +S + + E+ L L H+ +V+Y
Sbjct: 10 LGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQY 69
Query: 446 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR- 504
Y G L + +E T L I ME+ P
Sbjct: 70 Y-------------------GCL------------------RDPMERT-LSIFMEHMPGG 91
Query: 505 TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFG 564
+++ +SY + + RQI+EG++++H I+HRD+ NI D+ ++K+GDFG
Sbjct: 92 SIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFG 151
Query: 565 LAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 624
+K L+ L + TG SV GT ++ +PE+ G KAD++S+G
Sbjct: 152 ASKRLQTICL-------SGTGMKSV-----TGTPYWMSPEVISG-EGYGRKADIWSVGCT 198
Query: 625 FFEL------WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP 678
E+ W F AM ++ LPP V+ L+R+ + RP
Sbjct: 199 VVEMLTEKPPWAEFE-AMAAIFKIATQPTNPVLPPH-VSDHCRD--FLKRIFVEA-KLRP 253
Query: 679 SATELLQ 685
SA ELL+
Sbjct: 254 SADELLR 260
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 87.1 bits (216), Expect = 2e-18
Identities = 62/256 (24%), Positives = 113/256 (44%), Gaps = 49/256 (19%)
Query: 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK--SLPVNDRILREVATL 434
R ++ F+ + +G G +G V ++K G A+KK+RL ++ P+ +RE+ L
Sbjct: 3 KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPIT--AIREIKIL 60
Query: 435 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 494
+L H+++V + V D D++ + K +
Sbjct: 61 RQLNHRNIVNLKEI-----VTD-KQDAL------------------------DFKKDKGA 90
Query: 495 LYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 553
Y+ EY L + ES HF ++ +Q++EGL + H + +HRD+ +NI +
Sbjct: 91 FYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLN 150
Query: 554 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613
+ IK+ DFGLA+ + + + P T +V T +Y PE+ G +
Sbjct: 151 NKGQIKLADFGLARL-----YNSEESRPY---------TNKVITLWYRPPELLLGEERYG 196
Query: 614 EKADMYSLGIVFFELW 629
D++S G + EL+
Sbjct: 197 PAIDVWSCGCILGELF 212
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 86.2 bits (214), Expect = 7e-18
Identities = 64/247 (25%), Positives = 100/247 (40%), Gaps = 55/247 (22%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
++ L P+G G +G V + GR A+KK+ +S R RE+ L + H++V
Sbjct: 17 YQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENV 76
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADV-TGQENKLESTYLYIQMEY 501
+ DV T + + +Y+
Sbjct: 77 I-----------------------------------GLLDVFTPASSLEDFQDVYLVTHL 101
Query: 502 CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 561
L + + D + + L QI+ GL +IH GIIHRDL P+NI + ++KI
Sbjct: 102 MGADLNNIVKCQKLSDDHIQF-LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKIL 160
Query: 562 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621
DFGLA+ D + TG V T +Y APEI W ++ D++S+
Sbjct: 161 DFGLAR-----HTDDEM-------------TGYVATRWYRAPEIMLNWMHYNQTVDIWSV 202
Query: 622 GIVFFEL 628
G + EL
Sbjct: 203 GCIMAEL 209
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 84.4 bits (209), Expect = 1e-17
Identities = 80/324 (24%), Positives = 122/324 (37%), Gaps = 82/324 (25%)
Query: 386 LQPLGHGGFGHVVLCK----NKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
++ LG G FG V LC+ G AVK + + +D RE+ L L H++
Sbjct: 9 IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSD-FEREIEILRTLDHEN 67
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
+V+Y GV + G L + MEY
Sbjct: 68 IVKY------KGVCEKPGGRS--------------------------------LRLIMEY 89
Query: 502 CPR-TLRQVFESYDHFDKELAWHLFR---QIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
P +LR + H D+ L QI +G+ ++ Q IHRDL NI ++ +
Sbjct: 90 LPSGSLRDYLQR--HRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDL 147
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKA 616
+KI DFGLAK L P D V G+ ++Y APE + K +
Sbjct: 148 VKISDFGLAKVL-----------PEDKDYYYVKEPGESPIFWY-APECLRTS--KFSSAS 193
Query: 617 DMYSLGIVFFELW-------HPFSTAMERQIVLSD----------LKQKGELPPSWVAKF 659
D++S G+ +EL+ P + + + LK+ LP +
Sbjct: 194 DVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRP-PSCP 252
Query: 660 SEQESLLRRLMSPSPSDRPSATEL 683
E L++ P DRPS +L
Sbjct: 253 DEVYDLMKLCWEAEPQDRPSFADL 276
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 84.7 bits (210), Expect = 3e-17
Identities = 93/390 (23%), Positives = 150/390 (38%), Gaps = 97/390 (24%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD---KSLPVNDRILREVATLSRL 437
+DFE ++ +G G FG V L + K G YA+KK+R + K + R R++ L+
Sbjct: 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDI--LAEA 58
Query: 438 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
+ VV+ Y ++ Q+ YLY+
Sbjct: 59 DNPWVVKLYYSF------------------------------------QDEN----YLYL 78
Query: 498 QMEYCP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 553
MEY P TL D F +E + + + IH G IHRD+ P+N+ D
Sbjct: 79 IMEYLPGGDMMTL---LMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLD 135
Query: 554 ARNDIKIGDFGLAKFL-KLEQLDQDAAFPTDTGGVSVDGTGQ------------------ 594
A+ IK+ DFGL L K + + +D +
Sbjct: 136 AKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRAL 195
Query: 595 ----VGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDL 645
VGT Y APE+ + G+ K + D +SLG++ +E+ + PF + ++ +
Sbjct: 196 AYSTVGTPDYIAPEVFLQTGYNK---ECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKII 252
Query: 646 KQKGELP-PSWVAKFSEQESLLRRLMSPSPSDR---PSATELLQDALPPQMEYELLDN-- 699
K L P V E + L++RL R E+ +++E +
Sbjct: 253 NWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGVDWEHIRERP 311
Query: 700 --ILRMMHSSEDTSIYDKVVSSIFDEETLD 727
I+ + S DTS +D F+E LD
Sbjct: 312 APIIPELKSITDTSNFDD-----FEEIDLD 336
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 83.2 bits (205), Expect = 3e-17
Identities = 79/306 (25%), Positives = 132/306 (43%), Gaps = 62/306 (20%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
F +L+ +G G FG V + + A+K I L++ + D I +E+ LS+ +V
Sbjct: 6 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIED-IQQEITVLSQCDSPYV 64
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
+YY ++ L+ T L+I MEY
Sbjct: 65 TKYYGSY----------------------------------------LKGTKLWIIMEYL 84
Query: 503 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 562
FD+ + ++I++GL ++H + IHRD+ N+ + D+K+ D
Sbjct: 85 GGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLAD 144
Query: 563 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622
FG+A L Q+ ++ VGT F+ APE+ Q D KAD++SLG
Sbjct: 145 FGVAGQLTDTQIKRNTF---------------VGTPFWMAPEVIQQ-SAYDSKADIWSLG 188
Query: 623 IVFFEL--WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDRPS 679
I EL P ++ M VL + + PP+ +FS+ + + ++ PS RP+
Sbjct: 189 ITAIELAKGEPPNSDMHPMRVLFLIPKNN--PPTLTGEFSKPFKEFIDACLNKDPSFRPT 246
Query: 680 ATELLQ 685
A ELL+
Sbjct: 247 AKELLK 252
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 86.7 bits (215), Expect = 4e-17
Identities = 87/325 (26%), Positives = 139/325 (42%), Gaps = 62/325 (19%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKIR--LKDKSLPVNDRILREVATLSRLQHQHVVRYY 446
+G GG G V L + + R A+KKIR L + L + R LRE + L H +V Y
Sbjct: 10 IGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPL-LKKRFLREAKIAADLIHPGIVPVY 68
Query: 447 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTL 506
+ DGD ++ T YI+ L
Sbjct: 69 S------ICS-DGDPVY----------------------------YTMPYIEGYTLKSLL 93
Query: 507 RQVFESYDHFDKELA--------WHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
+ V++ + KELA +F +I + ++H +G++HRDL P+NI ++
Sbjct: 94 KSVWQK-ESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEV 152
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGT--GQ-VGTYFYTAPEIEQGWPKIDEK 615
I D+G A F KLE+ D + T G+ VGT Y APE G P E
Sbjct: 153 VILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPA-SES 211
Query: 616 ADMYSLGIVFFE---LWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRL--- 669
D+Y+LG++ ++ L P+ R+I D+ L P VA + E L ++
Sbjct: 212 TDIYALGVILYQMLTLSFPYRRKKGRKISYRDVI----LSPIEVAPYREIPPFLSQIAMK 267
Query: 670 -MSPSPSDRPSATELLQDALPPQME 693
++ P++R S+ + L+ L P ++
Sbjct: 268 ALAVDPAERYSSVQELKQDLEPHLQ 292
|
Length = 932 |
| >gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Score = 83.5 bits (207), Expect = 4e-17
Identities = 60/246 (24%), Positives = 102/246 (41%), Gaps = 47/246 (19%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
++ ++ +G G +G V + G+ A+KKI + R LRE+ L +H ++
Sbjct: 7 YKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNI 66
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
+ ADF DV Y+ M+
Sbjct: 67 IAIRDI-LRPPGADFK-----------------------DV------------YVVMDLM 90
Query: 503 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 562
L + S +E + Q++ GL +IH +IHRDL P+N+ + +++IGD
Sbjct: 91 ESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGD 150
Query: 563 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622
FG+A+ L ++ PT+ T V T +Y APE+ P+ DM+S+G
Sbjct: 151 FGMARGL--------SSSPTEHKYFM---TEYVATRWYRAPELLLSLPEYTTAIDMWSVG 199
Query: 623 IVFFEL 628
+F E+
Sbjct: 200 CIFAEM 205
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 82.5 bits (204), Expect = 5e-17
Identities = 81/316 (25%), Positives = 131/316 (41%), Gaps = 82/316 (25%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 448
LG G FG V ++K G A K I+++ + + D ++ E+ LS +H ++V Y+A
Sbjct: 13 LGDGAFGKVYKAQHKETGLFAAAKIIQIESEE-ELEDFMV-EIDILSECKHPNIVGLYEA 70
Query: 449 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLR 507
+F ++ L+I +E+C L
Sbjct: 71 YF------YENK----------------------------------LWILIEFCDGGALD 90
Query: 508 QVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLA 566
+ + + ++ RQ++E L +H +IHRDL NI D+K+ DFG++
Sbjct: 91 SIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVS 150
Query: 567 KFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI-------EQGWPKIDEKADMY 619
K +D F +GT ++ APE+ + + D KAD++
Sbjct: 151 AKNKSTLQKRD-TF--------------IGTPYWMAPEVVACETFKDNPY---DYKADIW 192
Query: 620 SLGIVFFELWH--PFSTAMERQIVLSDLK-QKGELP----PS-WVAKFSEQESLLRRLMS 671
SLGI EL P + VL LK K E P PS W + F++ L+ +
Sbjct: 193 SLGITLIELAQMEPPHHELNPMRVL--LKILKSEPPTLDQPSKWSSSFND---FLKSCLV 247
Query: 672 PSPSDRPSATELLQDA 687
P DRP+A ELL+
Sbjct: 248 KDPDDRPTAAELLKHP 263
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 82.4 bits (203), Expect = 5e-17
Identities = 73/309 (23%), Positives = 124/309 (40%), Gaps = 60/309 (19%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQ 438
L +F + +G G F V LDG A+KK+++ D ++E+ L +L
Sbjct: 1 LANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN 60
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
H +V++YY ++ E +N+L
Sbjct: 61 HPNVIKYYASFIE-----------------------------------DNELNIVLELAD 85
Query: 499 MEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
R ++ + ++ W F Q+ L H+H + ++HRD+ P N+F A +
Sbjct: 86 AGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVV 145
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKIDEKA 616
K+GD GL +F F + T VGT +Y +PE E G+ + K+
Sbjct: 146 KLGDLGLGRF-----------FSSKTTAAH----SLVGTPYYMSPERIHENGY---NFKS 187
Query: 617 DMYSLGIVFFE---LWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSP 672
D++SLG + +E L PF L ++ + PP +SE+ L+ ++P
Sbjct: 188 DIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINP 247
Query: 673 SPSDRPSAT 681
P RP T
Sbjct: 248 DPEKRPDIT 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 83.2 bits (206), Expect = 5e-17
Identities = 66/258 (25%), Positives = 109/258 (42%), Gaps = 60/258 (23%)
Query: 375 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL---KDKSLPVNDRILREV 431
R + +FE+L +G G +G V ++ G A+KK+R+ +D +P++ LRE+
Sbjct: 1 GRCRSVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-GIPISS--LREI 57
Query: 432 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 491
L L+H ++V + V G L+
Sbjct: 58 TLLLNLRHPNIVELKEV----------------------------------VVG--KHLD 81
Query: 492 STYLYIQMEYCPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 550
S +L MEYC + L + ++ F + L Q++ GL ++H IIHRDL +N+
Sbjct: 82 SIFLV--MEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNL 139
Query: 551 FFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610
+ +KI DFGLA+ G + T +V T +Y APE+ G
Sbjct: 140 LLTDKGCLKIADFGLAR---------------TYGLPAKPMTPKVVTLWYRAPELLLGCT 184
Query: 611 KIDEKADMYSLGIVFFEL 628
DM+++G + EL
Sbjct: 185 TYTTAIDMWAVGCILAEL 202
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 82.1 bits (203), Expect = 7e-17
Identities = 60/250 (24%), Positives = 108/250 (43%), Gaps = 61/250 (24%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
F++L+ LG G + V +N+ G A+K+I L D +RE++ + L+H+++
Sbjct: 2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHL-DAEEGTPSTAIREISLMKELKHENI 60
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
VR + DV ENKL + EY
Sbjct: 61 VRLH-----------------------------------DVIHTENKLMLVF-----EYM 80
Query: 503 PRTLRQVFESYDH---FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
+ L++ +++ D Q+++G+A H ++HRDL P N+ + R ++K
Sbjct: 81 DKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELK 140
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPEIEQGWPKIDEKADM 618
+ DFGLA+ AF G+ V+ + +V T +Y AP++ G D+
Sbjct: 141 LADFGLAR-----------AF-----GIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDI 184
Query: 619 YSLGIVFFEL 628
+S+G + E+
Sbjct: 185 WSVGCIMAEM 194
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 83.0 bits (205), Expect = 1e-16
Identities = 90/351 (25%), Positives = 139/351 (39%), Gaps = 89/351 (25%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
DF ++ +G G FG V L + K G+ YA+K + KS E+ +L H
Sbjct: 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLL---KS---------EMFKKDQLAHV 48
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
R A + DS W + S +S + ++ YLY+ ME
Sbjct: 49 KAERDVLA---------ESDSPW----VVSLYYSFQ--------------DAQYLYLIME 81
Query: 501 YCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
+ P L + YD F +++ + V + +H G IHRD+ P+NI D IK
Sbjct: 82 FLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIK 141
Query: 560 IGDFGLAK-FLKLEQ-------LDQDAAFPTDTG--GVSVDGT----------------- 592
+ DFGL+ F K L + V+VD
Sbjct: 142 LSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNR 201
Query: 593 -----GQVGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPF--STAME--R 638
VGT Y APEI +QG+ ++ D +SLG + FE W PF + E R
Sbjct: 202 RLMAYSTVGTPDYIAPEIFLQQGY---GQECDWWSLGAIMFECLIGWPPFCSENSHETYR 258
Query: 639 QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS--DRPSATELLQDA 687
+I+ + ++ P + E E L+RRL++ + + R A E+
Sbjct: 259 KII--NWRETLYFPDD-IHLSVEAEDLIRRLITNAENRLGRGGAHEIKSHP 306
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 81.3 bits (201), Expect = 1e-16
Identities = 61/251 (24%), Positives = 96/251 (38%), Gaps = 65/251 (25%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQ 440
D E ++ +G G FG V L ++++ +YA+K + + + L + E L + H
Sbjct: 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHP 61
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
++R + + +LY+ ME
Sbjct: 62 FIIRLFWTEHD----------------------------------------QRFLYMLME 81
Query: 501 YCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
Y P L + F +IV L ++H + I++RDL P NI D IK
Sbjct: 82 YVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIK 141
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV-GTYFYTAPEIEQGWPKIDEKA-D 617
+ DFG AK L D T + GT Y APE+ Q K KA D
Sbjct: 142 LTDFGFAKKL-------------------RDRTWTLCGTPEYLAPEVIQS--KGHNKAVD 180
Query: 618 MYSLGIVFFEL 628
++LGI+ +E+
Sbjct: 181 WWALGILIYEM 191
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 80.6 bits (199), Expect = 2e-16
Identities = 71/303 (23%), Positives = 117/303 (38%), Gaps = 75/303 (24%)
Query: 386 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD---KSLPVNDRILREVATLSRLQHQHV 442
L+P+ G FG V L K + G ++A+K ++ D K+ N + R + + + +V
Sbjct: 1 LKPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQG-ESPYV 59
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
+ Y +F ++ YLY+ MEY
Sbjct: 60 AKLY------------------------YSFQSK----------------DYLYLVMEYL 79
Query: 503 P----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
+L + ++ A ++V G+ +H +GIIHRD+ P N+ D +
Sbjct: 80 NGGDCASLIKTL---GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHL 136
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618
K+ DFGL++ G + VGT Y APE G D+ +D
Sbjct: 137 KLTDFGLSR----------------NGLENKK---FVGTPDYLAPETILGVGD-DKMSDW 176
Query: 619 YSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFS-EQESLLRRLMSPSP 674
+SLG V FE + PF + + L ++ P S E L+ RL+ P
Sbjct: 177 WSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDP 236
Query: 675 SDR 677
+ R
Sbjct: 237 AKR 239
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 81.0 bits (200), Expect = 2e-16
Identities = 90/332 (27%), Positives = 132/332 (39%), Gaps = 87/332 (26%)
Query: 383 FEE-----LQPLGHGGFGHVVLCK----NKLDGRHYAVKKIRLKDKSLPVNDRILREVAT 433
FEE +Q LG G FG V LC+ G AVKK++ + + D RE+
Sbjct: 1 FEERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQ-HSTAEHLRD-FEREIEI 58
Query: 434 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLEST 493
L LQH ++V+Y GV + +G
Sbjct: 59 LKSLQHDNIVKY------KGVC-------YSAGRRN------------------------ 81
Query: 494 YLYIQMEYCPR-TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 551
L + MEY P +LR + + D QI +G+ ++ + +HRDL NI
Sbjct: 82 -LRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNIL 140
Query: 552 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611
++ N +KIGDFGL K L P D V G+ ++Y APE K
Sbjct: 141 VESENRVKIGDFGLTKVL-----------PQDKEYYKVREPGESPIFWY-APE-SLTESK 187
Query: 612 IDEKADMYSLGIVFFELW-------HPFSTAMER--------QIV---LSDLKQKGEL-- 651
+D++S G+V +EL+ P + M IV + LK G L
Sbjct: 188 FSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPA 247
Query: 652 PPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 683
PP A E ++++ + PS RPS +EL
Sbjct: 248 PPGCPA---EIYAIMKECWNNDPSQRPSFSEL 276
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 81.8 bits (202), Expect = 2e-16
Identities = 84/338 (24%), Positives = 127/338 (37%), Gaps = 83/338 (24%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
++ + +G G +G V + G A+KKI + + RILRE+ L L+H +
Sbjct: 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDI 61
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
V +F +Y+ E
Sbjct: 62 VEIKHIMLPPSRREFKD-----------------------------------IYVVFELM 86
Query: 503 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 562
L QV ++ D E Q++ L +IH + HRDL P NI +A +KI D
Sbjct: 87 ESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICD 146
Query: 563 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI-EQGWPKIDEKADMYSL 621
FGLA+ AF DT ++ T V T +Y APE+ + K D++S+
Sbjct: 147 FGLAR----------VAF-NDTPT-AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSI 194
Query: 622 GIVFFE-----------------------LWHPFSTAMER------QIVLSDLKQKGELP 652
G +F E L P + R + LS +++K +P
Sbjct: 195 GCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVP 254
Query: 653 PSWVAKFSEQES----LLRRLMSPSPSDRPSATELLQD 686
S KF + LL RL++ P DRP+A E L D
Sbjct: 255 FS--QKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Score = 82.1 bits (203), Expect = 2e-16
Identities = 63/249 (25%), Positives = 105/249 (42%), Gaps = 53/249 (21%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
D E +P+G+G FG V + DG+ A+KK+ ++L R+ RE+ L +H +
Sbjct: 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDN 60
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADV--TGQENKLESTYLYIQM 499
V+ S+ D+ + E Y+ ++
Sbjct: 61 VL-----------------------------------SALDILQPPHIDPFEEIYVVTEL 85
Query: 500 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
L ++ S + QI+ GL ++H GI+HRD+ P N+ ++ +K
Sbjct: 86 MQS--DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLK 143
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619
I DFGLA ++E+ D+ S T +V T +Y APEI G D++
Sbjct: 144 ICDFGLA---RVEEPDE-----------SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIW 189
Query: 620 SLGIVFFEL 628
S+G +F EL
Sbjct: 190 SVGCIFAEL 198
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 81.3 bits (201), Expect = 2e-16
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 53/252 (21%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR------------ILREVATLSR 436
LG G +G V + L G+ A+KK+++ + S V LRE+ ++
Sbjct: 17 LGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNE 76
Query: 437 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 496
++H++++ DV + + ++
Sbjct: 77 IKHENIM-----------------------------------GLVDVYVEGD-----FIN 96
Query: 497 IQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 556
+ M+ L++V + + + QI+ GL +H +HRDL+P NIF +++
Sbjct: 97 LVMDIMASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKG 156
Query: 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616
KI DFGLA+ D +T + T +V T +Y APE+ G K
Sbjct: 157 ICKIADFGLARRYGYPPY-SDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAV 215
Query: 617 DMYSLGIVFFEL 628
DM+S+G +F EL
Sbjct: 216 DMWSVGCIFAEL 227
|
Length = 335 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 80.8 bits (200), Expect = 4e-16
Identities = 62/258 (24%), Positives = 99/258 (38%), Gaps = 71/258 (27%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
++ L +G G +G V +K G A+KKI + R LRE+ L R +H++
Sbjct: 6 RYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQT-FCQRTLREIKILRRFKHEN 64
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
++ D+ + +YI E
Sbjct: 65 IIGIL-----------------------------------DIIRPPSFESFNDVYIVQEL 89
Query: 502 CP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
+ ++ S DH + QI+ GL +IH ++HRDL P+N+ + D
Sbjct: 90 METDLYKLIKTQHLSNDH-----IQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCD 144
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ----VGTYFYTAPEI---EQGWP 610
+KI DFGLA+ E D TG V T +Y APEI +G+
Sbjct: 145 LKICDFGLARIADPEH----------------DHTGFLTEYVATRWYRAPEIMLNSKGYT 188
Query: 611 KIDEKADMYSLGIVFFEL 628
K D++S+G + E+
Sbjct: 189 K---AIDIWSVGCILAEM 203
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 80.0 bits (198), Expect = 4e-16
Identities = 67/255 (26%), Positives = 113/255 (44%), Gaps = 60/255 (23%)
Query: 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL--KDKSLPVNDRILREVATLS 435
R ++++E+L + G +G V ++K G A+KK+++ + + P+ LRE+ L
Sbjct: 2 RSVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITS--LREINILL 59
Query: 436 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 495
+LQH ++V E V G ++ +K+
Sbjct: 60 KLQHPNIVTVK----EVVV----GSNL-------------------------DKI----- 81
Query: 496 YIQMEYCPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 554
Y+ MEY L+ + E+ F + L Q++ G+AH+H I+HRDL +N+ +
Sbjct: 82 YMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNN 141
Query: 555 RNDIKIGDFGLA-KFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613
R +KI DFGLA ++ G T V T +Y APE+ G +
Sbjct: 142 RGILKICDFGLAREY----------------GSPLKPYTQLVVTLWYRAPELLLGAKEYS 185
Query: 614 EKADMYSLGIVFFEL 628
DM+S+G +F EL
Sbjct: 186 TAIDMWSVGCIFAEL 200
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 80.5 bits (199), Expect = 5e-16
Identities = 60/241 (24%), Positives = 95/241 (39%), Gaps = 50/241 (20%)
Query: 388 PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQ 447
P+G G +G V KN A+KKI + R LRE+ L L H++V+
Sbjct: 12 PIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVI---- 67
Query: 448 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLR 507
+ D+ ++ +YI E L
Sbjct: 68 -------------------------------AIKDIMPPPHREAFNDVYIVYELMDTDLH 96
Query: 508 QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 567
Q+ S + + Q++ GL +IH ++HRDL P+N+ +A D+KI DFGLA+
Sbjct: 97 QIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 156
Query: 568 FLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFE 627
+ F T+ V T +Y APE+ + D++S+G +F E
Sbjct: 157 -----TTSEKGDFMTE----------YVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAE 201
Query: 628 L 628
L
Sbjct: 202 L 202
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337 |
| >gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 80.3 bits (198), Expect = 7e-16
Identities = 61/246 (24%), Positives = 100/246 (40%), Gaps = 54/246 (21%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+ L+ +G G +G V +K G A+KK+ +S R RE+ L +QH++V
Sbjct: 17 YTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENV 76
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
+ + T D F + Y+ M Y
Sbjct: 77 IGLLDVF--TSAVSGDE-------------FQD-------------------FYLVMPYM 102
Query: 503 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 562
L+++ ++ +L Q++ GL +IH GIIHRDL P N+ + ++KI D
Sbjct: 103 QTDLQKIMGH--PLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILD 160
Query: 563 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622
FGLA+ E TG V T +Y APE+ W ++ D++S+G
Sbjct: 161 FGLARHADAEM------------------TGYVVTRWYRAPEVILNWMHYNQTVDIWSVG 202
Query: 623 IVFFEL 628
+ E+
Sbjct: 203 CIMAEM 208
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342 |
| >gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Score = 78.1 bits (192), Expect = 1e-15
Identities = 77/319 (24%), Positives = 132/319 (41%), Gaps = 68/319 (21%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQ 438
L +F+ + +G G F V LD + A+KK+++ + ++E+ L +L
Sbjct: 1 LANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLN 60
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
H +V++Y ++ E + A + D++ Q
Sbjct: 61 HPNVIKYLDSFIEDNELNI----------------VLELADAGDLS-------------Q 91
Query: 499 M-EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
M +Y + R + E W F Q+ + H+H + ++HRD+ P N+F A
Sbjct: 92 MIKYFKKQKRLIPE-------RTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGV 144
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKIDEK 615
+K+GD GL +F + T S+ VGT +Y +PE E G+ + K
Sbjct: 145 VKLGDLGLGRFFSSKT----------TAAHSL-----VGTPYYMSPERIHENGY---NFK 186
Query: 616 ADMYSLGIVFFE---LWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS- 671
+D++SLG + +E L PF L ++ + PP +SE+ LR L+S
Sbjct: 187 SDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEK---LRELVSM 243
Query: 672 ---PSPSDRPSATELLQDA 687
P P RP + Q A
Sbjct: 244 CIYPDPDQRPDIGYVHQIA 262
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 78.9 bits (194), Expect = 1e-15
Identities = 83/317 (26%), Positives = 129/317 (40%), Gaps = 76/317 (23%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+E + LG G FG V KNK G A K I K + + D ++ E+ L+ H ++
Sbjct: 14 WEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEE-ELEDYMV-EIEILATCNHPYI 71
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
V+ A++ +DG L+I +E+C
Sbjct: 72 VKLLGAFY------WDGK----------------------------------LWIMIEFC 91
Query: 503 PR-TLRQVFESYDHFDKELAWHLF-RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 560
P + + D E + RQ++E L ++H IIHRDL N+ DIK+
Sbjct: 92 PGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKL 151
Query: 561 GDFGL-AKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI-----EQGWPKIDE 614
DFG+ AK +K L + +F +GT ++ APE+ + P D
Sbjct: 152 ADFGVSAKNVK--TLQRRDSF--------------IGTPYWMAPEVVMCETMKDTP-YDY 194
Query: 615 KADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPS------WVAKFSEQESLLRR 668
KAD++SLGI E+ E + LK PP+ W +F + L+
Sbjct: 195 KADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRD---FLKT 251
Query: 669 LMSPSPSDRPSATELLQ 685
+ P RPSA +LL+
Sbjct: 252 ALDKHPETRPSAAQLLE 268
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Score = 78.6 bits (194), Expect = 2e-15
Identities = 70/266 (26%), Positives = 113/266 (42%), Gaps = 60/266 (22%)
Query: 364 SVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV 423
SV+ G ++ RY N L+P+G G G V + + G++ A+KK+ +++
Sbjct: 4 SVEVGDSTFTVLK-RYQN----LKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTH 58
Query: 424 NDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADV 483
R RE+ + + H++++ +
Sbjct: 59 AKRAYRELVLMKLVNHKNIIGLLNVF---------------------------------- 84
Query: 484 TGQENKLESTYLYIQMEYCPRTLRQVFE-SYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 542
T Q++ E +Y+ ME L QV + DH E +L Q++ G+ H+H GIIH
Sbjct: 85 TPQKSLEEFQDVYLVMELMDANLCQVIQMDLDH---ERMSYLLYQMLCGIKHLHSAGIIH 141
Query: 543 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 602
RDL P+NI + +KI DFGLA+ T G S T V T +Y A
Sbjct: 142 RDLKPSNIVVKSDCTLKILDFGLAR----------------TAGTSFMMTPYVVTRYYRA 185
Query: 603 PEIEQGWPKIDEKADMYSLGIVFFEL 628
PE+ G E D++S+G + E+
Sbjct: 186 PEVILGMG-YKENVDIWSVGCIMGEM 210
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 77.4 bits (190), Expect = 2e-15
Identities = 75/306 (24%), Positives = 128/306 (41%), Gaps = 62/306 (20%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
F +L+ +G G FG V + + A+K I L++ + D I +E+ LS+ +V
Sbjct: 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIED-IQQEITVLSQCDSPYV 64
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
+YY ++ L+ T L+I MEY
Sbjct: 65 TKYYGSY----------------------------------------LKDTKLWIIMEYL 84
Query: 503 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 562
D+ + R+I++GL ++H + IHRD+ N+ ++K+ D
Sbjct: 85 GGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLAD 144
Query: 563 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622
FG+A L Q+ ++ VGT F+ APE+ + D KAD++SLG
Sbjct: 145 FGVAGQLTDTQIKRNTF---------------VGTPFWMAPEVIKQ-SAYDSKADIWSLG 188
Query: 623 IVFFEL--WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDRPS 679
I EL P + + VL + + PP+ +S+ + + ++ PS RP+
Sbjct: 189 ITAIELAKGEPPHSELHPMKVLFLIPKNN--PPTLEGNYSKPLKEFVEACLNKEPSFRPT 246
Query: 680 ATELLQ 685
A ELL+
Sbjct: 247 AKELLK 252
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 77.2 bits (190), Expect = 3e-15
Identities = 81/312 (25%), Positives = 127/312 (40%), Gaps = 76/312 (24%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKD--KSLPVNDRILREVATLSRLQHQHVVRYY 446
LG G +G V ++ A+K+I +D P+++ E+A S L+H+++V+Y
Sbjct: 16 LGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHE----EIALHSYLKHRNIVQY- 70
Query: 447 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-T 505
L S E+ + I ME P +
Sbjct: 71 ---------------------LGSD------------------SENGFFKIFMEQVPGGS 91
Query: 506 LRQVFESY--DHFDKELAWHLF-RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI-KIG 561
L + S D E + +QI+EGL ++H I+HRD+ +N+ + + + KI
Sbjct: 92 LSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKIS 151
Query: 562 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADMYS 620
DFG +K L G++ GT Y APE I++G AD++S
Sbjct: 152 DFGTSKRL---------------AGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWS 196
Query: 621 LGIVFFELWH---PFSTAMERQIVLSDL---KQKGELPPSWVAKFSEQESLLRRLMSPSP 674
LG E+ PF E Q + + K E+P S A E ++ + R P P
Sbjct: 197 LGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSA---EAKNFILRCFEPDP 253
Query: 675 SDRPSATELLQD 686
R SA +LLQD
Sbjct: 254 DKRASAHDLLQD 265
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 76.7 bits (189), Expect = 5e-15
Identities = 60/249 (24%), Positives = 100/249 (40%), Gaps = 56/249 (22%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
+E L +G G +G V+ CK+K G+ A+KK + V +RE+ L +L+H+
Sbjct: 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHE 60
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
++V + +V ++ +L Y+ E
Sbjct: 61 NLV-----------------------------------NLIEVFRRKKRL-----YLVFE 80
Query: 501 YCPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
+ T+ E Y + D+ QI+ G+ H IIHRD+ P NI +K
Sbjct: 81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVK 140
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619
+ DFG A+ L A P + T V T +Y APE+ G K D++
Sbjct: 141 LCDFGFARTL---------AAPGE------VYTDYVATRWYRAPELLVGDTKYGRAVDIW 185
Query: 620 SLGIVFFEL 628
++G + E+
Sbjct: 186 AVGCLVTEM 194
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 77.8 bits (191), Expect = 5e-15
Identities = 65/249 (26%), Positives = 104/249 (41%), Gaps = 53/249 (21%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 439
L ++ L+P+G G G V + + R+ A+KK+ ++ R RE+ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
++++ + T Q++ E +YI M
Sbjct: 83 KNIIGLLNVF----------------------------------TPQKSLEEFQDVYIVM 108
Query: 500 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
E L QV + D E +L Q++ G+ H+H GIIHRDL P+NI + +K
Sbjct: 109 ELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619
I DFGLA+ T G S T V T +Y APE+ G E D++
Sbjct: 167 ILDFGLAR----------------TAGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIW 209
Query: 620 SLGIVFFEL 628
S+G + E+
Sbjct: 210 SVGCIMGEM 218
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 77.3 bits (190), Expect = 5e-15
Identities = 59/246 (23%), Positives = 104/246 (42%), Gaps = 53/246 (21%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+ +L+ +G G +G V ++ G A+KK+ +S R RE+ L ++H++V
Sbjct: 17 YRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENV 76
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
+ G+ D T + Y+ M +
Sbjct: 77 I---------GLLDV-------------------------FTPDLSLDRFHDFYLVMPFM 102
Query: 503 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 562
L ++ + ++ ++ L Q+++GL +IH GIIHRDL P N+ + ++KI D
Sbjct: 103 GTDLGKLMK-HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILD 161
Query: 563 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622
FGLA+ Q D + TG V T +Y APE+ W + D++S+G
Sbjct: 162 FGLAR-----QTDSEM-------------TGYVVTRWYRAPEVILNWMHYTQTVDIWSVG 203
Query: 623 IVFFEL 628
+ E+
Sbjct: 204 CIMAEM 209
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 75.1 bits (184), Expect = 2e-14
Identities = 74/307 (24%), Positives = 127/307 (41%), Gaps = 64/307 (20%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
F +L+ +G G FG V + A+K I L++ + D I +E+ LS+ ++
Sbjct: 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIED-IQQEITVLSQCDSPYI 64
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
RYY ++ L+ T L+I MEY
Sbjct: 65 TRYYGSY----------------------------------------LKGTKLWIIMEYL 84
Query: 503 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 562
++ + R+I++GL ++H + IHRD+ N+ + D+K+ D
Sbjct: 85 GGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLAD 144
Query: 563 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622
FG+A L Q+ ++ VGT F+ APE+ + D KAD++SLG
Sbjct: 145 FGVAGQLTDTQIKRNTF---------------VGTPFWMAPEVIKQ-SAYDFKADIWSLG 188
Query: 623 IVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDRP 678
I EL P S +++ K PP+ ++S+ + + ++ P RP
Sbjct: 189 ITAIELAKGEPPNSDLHPMRVLFLIPKNS---PPTLEGQYSKPFKEFVEACLNKDPRFRP 245
Query: 679 SATELLQ 685
+A ELL+
Sbjct: 246 TAKELLK 252
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 74.5 bits (183), Expect = 2e-14
Identities = 74/316 (23%), Positives = 117/316 (37%), Gaps = 69/316 (21%)
Query: 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRL----KDKSLPVNDRILREVATLSRLQHQHV 442
Q LG G F ++ G AVK++ + V + + +E+ ++RL H H+
Sbjct: 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHI 65
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
+R A E F+ W +G S S A V + Y
Sbjct: 66 IRMLGATCEDS--HFNLFVEWMAGGSVSHLLSKYGAFKEAVI--------------INYT 109
Query: 503 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR-NDIKIG 561
Q++ GL+++H IIHRD+ N+ D+ ++I
Sbjct: 110 -----------------------EQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIA 146
Query: 562 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ-VGTYFYTAPEIEQGWPKIDEKADMYS 620
DFG A L AA T G GQ +GT + APE+ +G D++S
Sbjct: 147 DFGAAARL--------AAKGTGAGEFQ----GQLLGTIAFMAPEVLRGEQ-YGRSCDVWS 193
Query: 621 LGIVFFEL------WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSE--QESLLRRLMSP 672
+G V E+ W+ + ++ PS S ++ LR L
Sbjct: 194 VGCVIIEMATAKPPWNAEKHSNHLALIFKIASATT--APSIPEHLSPGLRDVTLRCLEL- 250
Query: 673 SPSDRPSATELLQDAL 688
P DRP + ELL+ +
Sbjct: 251 QPEDRPPSRELLKHPV 266
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 74.8 bits (184), Expect = 2e-14
Identities = 81/331 (24%), Positives = 129/331 (38%), Gaps = 97/331 (29%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND----RILREVATLSR 436
+D E ++ LG G +G V ++ G AVK+IR VN R+L ++ R
Sbjct: 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRAT-----VNSQEQKRLLMDLDISMR 55
Query: 437 LQH-QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 495
+ V +Y A F G DV
Sbjct: 56 SVDCPYTVTFYGALFREG----------------------------DV------------ 75
Query: 496 YIQMEYCPRTL----RQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNI 550
+I ME +L ++V++ +++ + IV+ L ++H + +IHRD+ P+N+
Sbjct: 76 WICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNV 135
Query: 551 FFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE---IEQ 607
+ +K+ DFG++ +L D SV T G Y APE E
Sbjct: 136 LINRNGQVKLCDFGISGYL------------VD----SVAKTIDAGCKPYMAPERINPEL 179
Query: 608 GWPKIDEKADMYSLGIVFFEL---------WH-PFSTAMERQIVLSDLKQKGELPPSWVA 657
D K+D++SLGI EL W PF LKQ E P +
Sbjct: 180 NQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPF----------QQLKQVVEEPSPQLP 229
Query: 658 --KFSEQ-ESLLRRLMSPSPSDRPSATELLQ 685
KFS + + + + + + +RP+ ELLQ
Sbjct: 230 AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 75.4 bits (186), Expect = 2e-14
Identities = 77/322 (23%), Positives = 127/322 (39%), Gaps = 73/322 (22%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND----RILREVATLSRL 437
F++++ LG G G V L + K G+ +A+K + DK + R+L E L+ L
Sbjct: 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVL---DKKEMIKRNKVKRVLTEQEILATL 58
Query: 438 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
H + Y A F+T TYL +
Sbjct: 59 DHPFLPTLY-ASFQT---------------------------------------ETYLCL 78
Query: 498 QMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
M+YCP R L++ +E+A +++ L ++H GI++RDL P NI
Sbjct: 79 VMDYCPGGELFRLLQRQPGKC--LSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILL 136
Query: 553 DARNDIKIGDFGLAKFLKLE--QLDQDAAFPTDTGGVS-------VDGTGQ-----VGTY 598
I + DF L+K +E + + + V+ + VGT
Sbjct: 137 HESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTE 196
Query: 599 FYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW 655
Y APE+ G D ++LGI+ +E+ + PF + + + LK++ P S
Sbjct: 197 EYIAPEVISGDGH-GSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSP 255
Query: 656 VAKFSEQESLLRRLMSPSPSDR 677
S L+R+L+ PS R
Sbjct: 256 -PVSSSARDLIRKLLVKDPSKR 276
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 76.8 bits (189), Expect = 2e-14
Identities = 56/187 (29%), Positives = 91/187 (48%), Gaps = 25/187 (13%)
Query: 506 LRQVFESYDHFDKELAWH----LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 561
LRQ +S ++ H LF Q++ + H+H + +IHRD+ NI + +K+G
Sbjct: 126 LRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLG 185
Query: 562 DFGLAKFLKLEQLDQDAAFPTDTGGVSVD-GTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620
DFG +K VS D G GT +Y APEI + P +KADM+S
Sbjct: 186 DFGFSKMY--------------AATVSDDVGRTFCGTPYYVAPEIWRRKP-YSKKADMFS 230
Query: 621 LGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677
LG++ +EL PF +++ L + + P ++ E + ++ L+S P R
Sbjct: 231 LGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPPSISP--EMQEIVTALLSSDPKRR 288
Query: 678 PSATELL 684
PS+++LL
Sbjct: 289 PSSSKLL 295
|
Length = 496 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 75.2 bits (185), Expect = 2e-14
Identities = 84/309 (27%), Positives = 125/309 (40%), Gaps = 86/309 (27%)
Query: 386 LQPLGHGGFGHVVLCKNKL---DGRHYAVKKIRLKDKSLPVNDRI--LREVATLSRLQHQ 440
L+ LG G FG V L + G+ YA+K LK +L V DR+ E L+ + H
Sbjct: 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKV--LKKATLKVRDRVRTKMERDILAEVNHP 58
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM- 499
+V+ + A F+T E KL YL +
Sbjct: 59 FIVKLHYA-FQT----------------------------------EGKL---YLILDFL 80
Query: 500 ---EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 556
+ R ++V F +E ++ L H+H GII+RDL P NI D
Sbjct: 81 RGGDLFTRLSKEVM-----FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG 135
Query: 557 DIKIGDFGLAKFLKLEQLDQDA---AFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPK 611
IK+ DFGL+K E +D + +F GT Y APE+ +G
Sbjct: 136 HIKLTDFGLSK----ESIDHEKKAYSF--------------CGTVEYMAPEVVNRRGH-- 175
Query: 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRR 668
+ AD +S G++ FE+ PF ++ + LK K +P E +SLLR
Sbjct: 176 -TQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQFLSP---EAQSLLRA 231
Query: 669 LMSPSPSDR 677
L +P++R
Sbjct: 232 LFKRNPANR 240
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 77.2 bits (190), Expect = 4e-14
Identities = 58/207 (28%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 487 ENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDL 545
+ L+ EY P RTLR+V + L Q+++ LA H QGI+HRDL
Sbjct: 46 SGEAPPGLLFAVFEYVPGRTLREVLAADGALPAGETGRLMLQVLDALACAHNQGIVHRDL 105
Query: 546 TPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 602
P NI K+ DFG+ L + D D A T T V +GT Y A
Sbjct: 106 KPQNIMVSQTGVRPHAKVLDFGIGTLLPGVR-DADVATLTRTTEV-------LGTPTYCA 157
Query: 603 PEIEQGWPKIDEKADMYSLGIVFFELW--HPFSTAMERQIVLSDLKQKGELP---PSWVA 657
PE +G P + +D+Y+ G++F E +L +Q + P W+A
Sbjct: 158 PEQLRGEP-VTPNSDLYAWGLIFLECLTGQRVVQGASVAEIL--YQQLSPVDVSLPPWIA 214
Query: 658 KFSEQESLLRRLMSPSPSDRPSATELL 684
+ +LR+ ++ P R ++ L
Sbjct: 215 GHPLGQ-VLRKALNKDPRQRAASAPAL 240
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 74.7 bits (183), Expect = 4e-14
Identities = 69/271 (25%), Positives = 114/271 (42%), Gaps = 60/271 (22%)
Query: 358 SQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK 417
+QF+ SV+ G ++ L ++ L+P+G G G V + + R+ A+KK+
Sbjct: 1 NQFY--SVEVGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 53
Query: 418 DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRA 477
++ R RE+ + + H++++ +
Sbjct: 54 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVF---------------------------- 85
Query: 478 ASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537
T Q++ E +Y+ ME L QV + D E +L Q++ G+ H+H
Sbjct: 86 ------TPQKSLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHS 137
Query: 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 597
GIIHRDL P+NI + +KI DFGLA+ T G S T V T
Sbjct: 138 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGTSFMMTPYVVT 181
Query: 598 YFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 628
+Y APE+ G E D++S+G + E+
Sbjct: 182 RYYRAPEVILGM-GYKENVDIWSVGCIMGEM 211
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Score = 73.9 bits (181), Expect = 4e-14
Identities = 71/314 (22%), Positives = 132/314 (42%), Gaps = 62/314 (19%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQH 441
+E ++ +G G +G V NK +G AVK + D +++ I E L L H +
Sbjct: 20 WEIIETIGKGTYGKVFKVLNKKNGSKAAVK---ILDPIHDIDEEIEAEYNILKALSDHPN 76
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
VV++Y +++ V + GD +W L + S D+
Sbjct: 77 VVKFYGMYYKKDVKN--GDQLWLVLELCN------GGSVTDL------------------ 110
Query: 502 CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 561
++ + + ++ + ++ + + GL H+H IHRD+ NNI +K+
Sbjct: 111 ----VKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLV 166
Query: 562 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----EQGWPKIDEKAD 617
DFG++ L +L ++ + VGT F+ APE+ +Q D + D
Sbjct: 167 DFGVSAQLTSTRLRRNTS---------------VGTPFWMAPEVIACEQQLDSTYDARCD 211
Query: 618 MYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPS------WVAKFSEQESLLRRLMS 671
++SLGI EL + + + K PP+ W +F++ +R+ ++
Sbjct: 212 VWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFND---FIRKCLT 268
Query: 672 PSPSDRPSATELLQ 685
RP+ ++LLQ
Sbjct: 269 KDYEKRPTVSDLLQ 282
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 74.1 bits (183), Expect = 6e-14
Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 47/193 (24%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586
Q+++ L +IH +IHRDL P+NI ++ +K+ DFGLA+ L +L+++ P
Sbjct: 115 QLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLAR--SLSELEENPENP----- 167
Query: 587 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----------------- 629
T V T +Y APEI G + + DM+S+G + E+
Sbjct: 168 ---VLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEK 224
Query: 630 -----------------HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 672
PF+ M + K EL P + LL++L+
Sbjct: 225 IIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPK---ASDDALDLLKKLLVF 281
Query: 673 SPSDRPSATELLQ 685
+P+ R +A E L+
Sbjct: 282 NPNKRLTAEEALE 294
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 74.1 bits (182), Expect = 6e-14
Identities = 77/325 (23%), Positives = 129/325 (39%), Gaps = 97/325 (29%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR---ILREVATLSRLQH 439
F +L+ +GHG FG V ++ A+KK+ K N++ I++EV L +L+H
Sbjct: 17 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQ--SNEKWQDIIKEVRFLQQLRH 74
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
+ + Y + L ++ M
Sbjct: 75 PNTIEYKGCY----------------------------------------LREHTAWLVM 94
Query: 500 EYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
EYC + + E + + E+A + ++GLA++H IHRD+ NI
Sbjct: 95 EYCLGSASDILEVHKKPLQEVEIA-AICHGALQGLAYLHSHERIHRDIKAGNILLTEPGT 153
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----EQGWPKID 613
+K+ DFG A + P ++ VGT ++ APE+ ++G + D
Sbjct: 154 VKLADFGSASLVS----------PANSF---------VGTPYWMAPEVILAMDEG--QYD 192
Query: 614 EKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGEL-------PPS-----WVAKFSE 661
K D++SLGI EL ER+ L ++ L P+ W F
Sbjct: 193 GKVDVWSLGITCIEL-------AERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRN 245
Query: 662 -QESLLRRLMSPSPSDRPSATELLQ 685
+S L+++ P DRPS+ ELL+
Sbjct: 246 FVDSCLQKI----PQDRPSSEELLK 266
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 74.1 bits (182), Expect = 6e-14
Identities = 60/194 (30%), Positives = 86/194 (44%), Gaps = 37/194 (19%)
Query: 495 LYIQMEYCPRTLRQVFESYDHFDKE------LAWHLFRQIVEGLAHIHGQGIIHRDLTPN 548
LY+ +EY E + H ++E A +I L H+H QGII+RDL P
Sbjct: 75 LYLILEYLSGG-----ELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPE 129
Query: 549 NIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ- 607
NI DA+ +K+ DFGL K E + + T GT Y APEI
Sbjct: 130 NILLDAQGHVKLTDFGLCK----ESIHEGTVTHT-----------FCGTIEYMAPEILMR 174
Query: 608 -GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQE 663
G K D +SLG + +++ PF+ ++ + LK K LPP E
Sbjct: 175 SGHGK---AVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPYLT---PEAR 228
Query: 664 SLLRRLMSPSPSDR 677
LL++L+ +PS R
Sbjct: 229 DLLKKLLKRNPSSR 242
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|238396 cd00773, HisRS-like_core, Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain | Back alignment and domain information |
|---|
Score = 73.0 bits (180), Expect = 6e-14
Identities = 40/174 (22%), Positives = 71/174 (40%), Gaps = 14/174 (8%)
Query: 751 DTELRDYVVQVTKEMFRQHCAK-----HLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLEL 805
+ LR Y+ +E+F ++ + E ++L + + + GG L L
Sbjct: 1 EAALRRYIEDTLREVFERYGYEEIDTPVFEYTELFLRKSGDEVSKEMYRFKDKGGRDLAL 60
Query: 806 SHELRLPFIRWAISNQKS---SFKRYEISSVYRR---AIGHSPPNRYLQGDFDIIGGASA 859
+L P R N S K Y I V+R G + Q +IIG S
Sbjct: 61 RPDLTAPVARAVAENLLSLPLPLKLYYIGPVFRYERPQKGR--YREFYQVGVEIIGSDSP 118
Query: 860 LTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELL 913
L +AEV+ + ++I+ + I +NH +L+ I + E+ E++ + L
Sbjct: 119 LADAEVIALAVEILEALG-LKDFQIKINHRGILDGIAGLLEDREEYIERLIDKL 171
|
HisRS is a homodimer. It is responsible for the attachment of histidine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs. This domain is also found at the C-terminus of eukaryotic GCN2 protein kinase and at the N-terminus of the ATP phosphoribosyltransferase accessory subunit, HisZ. HisZ along with HisG catalyze the first reaction in histidine biosynthesis. HisZ is found only in a subset of bacteria and differs from HisRS in lacking a C-terminal anti-codon binding domain. Length = 261 |
| >gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Score = 74.3 bits (182), Expect = 8e-14
Identities = 70/271 (25%), Positives = 112/271 (41%), Gaps = 60/271 (22%)
Query: 358 SQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK 417
SQF+ SV ++ L +++L+P+G G G V + + G + AVKK+
Sbjct: 5 SQFY--SVQVADSTFTV-----LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRP 57
Query: 418 DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRA 477
++ R RE+ L + H++++ +
Sbjct: 58 FQNQTHAKRAYRELVLLKCVNHKNIISLLNVF---------------------------- 89
Query: 478 ASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537
T Q++ E +Y+ ME L QV + D E +L Q++ G+ H+H
Sbjct: 90 ------TPQKSLEEFQDVYLVMELMDANLCQVI--HMELDHERMSYLLYQMLCGIKHLHS 141
Query: 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 597
GIIHRDL P+NI + +KI DFGLA+ T + T V T
Sbjct: 142 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TACTNFMMTPYVVT 185
Query: 598 YFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 628
+Y APE+ G E D++S+G + EL
Sbjct: 186 RYYRAPEVILGM-GYKENVDIWSVGCIMGEL 215
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359 |
| >gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 73.9 bits (181), Expect = 8e-14
Identities = 65/246 (26%), Positives = 103/246 (41%), Gaps = 53/246 (21%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 19 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 78
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
+ G+ D F+ A S + E +Y+
Sbjct: 79 I---------GLLD---------------VFT--PARSLE--------EFNDVYLVTHLM 104
Query: 503 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 562
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 105 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 163
Query: 563 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622
FGLA+ E TG V T +Y APEI W ++ D++S+G
Sbjct: 164 FGLARHTDDEM------------------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 205
Query: 623 IVFFEL 628
+ EL
Sbjct: 206 CIMAEL 211
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 72.7 bits (178), Expect = 9e-14
Identities = 65/245 (26%), Positives = 107/245 (43%), Gaps = 57/245 (23%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRL----KDKSLPVNDRILREVATLSRLQHQHVVR 444
LG G FG V LC + GR AVK++ ++ S VN + E+ L L+H +V+
Sbjct: 10 LGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVN-ALECEIQLLKNLRHDRIVQ 68
Query: 445 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 504
YY G L E KL I +EY P
Sbjct: 69 YY-------------------GCLRDPE--------------EKKLS-----IFVEYMPG 90
Query: 505 -TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDF 563
+++ ++Y + + RQI++G++++H I+HRD+ NI D+ ++K+GDF
Sbjct: 91 GSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDF 150
Query: 564 GLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623
G +K ++ + TG SV GT ++ +PE+ G KAD++S+
Sbjct: 151 GASKRIQ-------TICMSGTGIKSV-----TGTPYWMSPEVISG-EGYGRKADVWSVAC 197
Query: 624 VFFEL 628
E+
Sbjct: 198 TVVEM 202
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 73.6 bits (181), Expect = 1e-13
Identities = 71/260 (27%), Positives = 103/260 (39%), Gaps = 68/260 (26%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDR--ILREVATLSRL 437
DF+ L +G GG+G V L K K G A+K R+K L +N+ +L E L+
Sbjct: 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALK--RMKKSLLFKLNEVRHVLTERDILTTT 58
Query: 438 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
+ + +V+ A F D YLY+
Sbjct: 59 KSEWLVKLLYA--------FQDDE--------------------------------YLYL 78
Query: 498 QMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 556
MEY P R + + ++ A ++ E + +H G IHRDL P N DA
Sbjct: 79 AMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASG 138
Query: 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616
IK+ DFGL+K G V+ VG+ Y APE+ +G D
Sbjct: 139 HIKLTDFGLSK-----------------GIVTY-ANSVVGSPDYMAPEVLRG-KGYDFTV 179
Query: 617 DMYSLGIVFFEL---WHPFS 633
D +SLG + +E + PFS
Sbjct: 180 DYWSLGCMLYEFLCGFPPFS 199
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 72.8 bits (178), Expect = 1e-13
Identities = 74/328 (22%), Positives = 129/328 (39%), Gaps = 78/328 (23%)
Query: 365 VDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN 424
VD G P L E +G G G V + + K GR AVK + L+ +
Sbjct: 14 VDQGDPRSLL---------ENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQR--R 62
Query: 425 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 484
+ + EV + QHQ+VV Y+++ +
Sbjct: 63 ELLFNEVVIMRDYQHQNVVEMYKSY---------------------------------LV 89
Query: 485 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544
G+E L++ ME+ S ++E + +++ L ++H QG+IHRD
Sbjct: 90 GEE-------LWVLMEFLQGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRD 142
Query: 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 604
+ ++I +K+ DFG Q+ +D VGT ++ APE
Sbjct: 143 IKSDSILLTLDGRVKLSDFGFCA-----QISKDVP----------KRKSLVGTPYWMAPE 187
Query: 605 IEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSE 661
+ P E D++SLGI+ E+ P+ + + +K+ + PP + +
Sbjct: 188 VISRTPYGTE-VDIWSLGIMVIEMVDGEPPYFS----DSPVQAMKRLRDSPPPKLKNAHK 242
Query: 662 QESLLR----RLMSPSPSDRPSATELLQ 685
+LR R+++ P +R +A ELL
Sbjct: 243 ISPVLRDFLERMLTREPQERATAQELLD 270
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 72.3 bits (178), Expect = 1e-13
Identities = 72/332 (21%), Positives = 131/332 (39%), Gaps = 93/332 (28%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QH 439
FE ++ +G G +G V ++K G+ A+K + + + + I E L + H
Sbjct: 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDE---EEEIKEEYNILRKYSNH 62
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
++ +Y A+ + + G +++L ++ M
Sbjct: 63 PNIATFYGAFIK-----------------------------KNPPGNDDQL-----WLVM 88
Query: 500 EYCP--------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 551
E C + LR+ + +E ++ R+ + GLA++H +IHRD+ NI
Sbjct: 89 ELCGGGSVTDLVKGLRKKGKR---LKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNIL 145
Query: 552 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----EQ 607
++K+ DFG++ L +T +GT ++ APE+ EQ
Sbjct: 146 LTKNAEVKLVDFGVSAQLDSTLGR------RNTF---------IGTPYWMAPEVIACDEQ 190
Query: 608 GWPKIDEKADMYSLGIVFFEL---------WHPFSTAMERQIVLSD---LKQKGELPPSW 655
D ++D++SLGI EL HP +I + LK P +W
Sbjct: 191 PDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALF--KIPRNPPPTLKS----PENW 244
Query: 656 VAKFSE--QESLLRRLMSPSPSDRPSATELLQ 685
KF++ E L++ + RP ELL+
Sbjct: 245 SKKFNDFISECLIK-----NYEQRPFMEELLE 271
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Score = 72.4 bits (178), Expect = 1e-13
Identities = 81/322 (25%), Positives = 125/322 (38%), Gaps = 79/322 (24%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 439
LND E L +G G G V + K G AVK++R N RIL ++ + H
Sbjct: 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK-EENKRILMDLDVVL-KSH 71
Query: 440 Q--HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
++V+ Y + + D D ++I
Sbjct: 72 DCPYIVKCYGYF----ITDSD------------------------------------VFI 91
Query: 498 QMEY----CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHI-HGQGIIHRDLTPNNIFF 552
ME + L+++ +++ + IV+ L ++ G+IHRD+ P+NI
Sbjct: 92 CMELMSTCLDKLLKRI---QGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILL 148
Query: 553 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE---IEQGW 609
DA ++K+ DFG++ L D S T G Y APE
Sbjct: 149 DASGNVKLCDFGISGRL------------VD----SKAKTRSAGCAAYMAPERIDPPDPN 192
Query: 610 PKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKG--ELPPSWVAKFSEQ-E 663
PK D +AD++SLGI EL P+ VL+ + Q+ LPP+ FS
Sbjct: 193 PKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPN--EGFSPDFC 250
Query: 664 SLLRRLMSPSPSDRPSATELLQ 685
S + ++ RP ELLQ
Sbjct: 251 SFVDLCLTKDHRKRPKYRELLQ 272
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296 |
| >gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 72.8 bits (178), Expect = 2e-13
Identities = 63/247 (25%), Positives = 106/247 (42%), Gaps = 55/247 (22%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
++ L P+G G +G V + + AVKK+ +SL R RE+ L ++H++V
Sbjct: 17 YQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENV 76
Query: 443 VRYYQAWF-ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
+ + T + +F+ ++ L + +N +
Sbjct: 77 IGLLDVFTPATSIENFN--EVYLVTNLMGADLNN-----------------------IVK 111
Query: 502 CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 561
C + S +H L Q++ GL +IH GIIHRDL P+N+ + +++I
Sbjct: 112 CQKL------SDEHVQ-----FLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRIL 160
Query: 562 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621
DFGLA+ Q D + TG V T +Y APEI W ++ D++S+
Sbjct: 161 DFGLAR-----QADDEM-------------TGYVATRWYRAPEIMLNWMHYNQTVDIWSV 202
Query: 622 GIVFFEL 628
G + EL
Sbjct: 203 GCIMAEL 209
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 72.3 bits (178), Expect = 2e-13
Identities = 66/264 (25%), Positives = 104/264 (39%), Gaps = 74/264 (28%)
Query: 383 FEELQPLGHGGFGHVVLCKNK--LDGRHYAVKKIR-LKDKSLPVNDRILREVATLSRLQH 439
+E +G G +G V K K DG+ YA+KK + K++ ++ RE+A L L+H
Sbjct: 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKH 61
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
++VV + F A S +Y+
Sbjct: 62 ENVVSLVEV------------------------FLEHADKS--------------VYLLF 83
Query: 500 EYCPRTLRQVFESYDHFD---------KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 550
+Y L Q+ + + K L W QI+ G+ ++H ++HRDL P NI
Sbjct: 84 DYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLW----QILNGVHYLHSNWVLHRDLKPANI 139
Query: 551 F----FDARNDIKIGDFGLAKFLK--LEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 604
R +KIGD GLA+ L+ L D V T +Y APE
Sbjct: 140 LVMGEGPERGVVKIGDLGLARLFNAPLKPL--------------ADLDPVVVTIWYRAPE 185
Query: 605 IEQGWPKIDEKADMYSLGIVFFEL 628
+ G + D++++G +F EL
Sbjct: 186 LLLGARHYTKAIDIWAIGCIFAEL 209
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 71.7 bits (176), Expect = 2e-13
Identities = 51/172 (29%), Positives = 79/172 (45%), Gaps = 25/172 (14%)
Query: 514 DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQ 573
+HF + +IV L H+H GII+RD+ NI D+ + + DFGL+K E+
Sbjct: 100 EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE 159
Query: 574 LDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA-DMYSLGIVFFELW--- 629
++ +F GT Y APE+ +G +KA D +SLG++ FEL
Sbjct: 160 EERAYSF--------------CGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGA 205
Query: 630 HPFSTAMER----QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677
PF+ E+ +I LK K P + A E +++L+ P R
Sbjct: 206 SPFTVDGEQNSQSEISRRILKSKPPFPKTMSA---EARDFIQKLLEKDPKKR 254
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 71.0 bits (174), Expect = 4e-13
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586
QI+ GL H+H + I++RDL P N+ D +++I D GLA LK +
Sbjct: 103 QIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK-------KI---- 151
Query: 587 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLS 643
G+ GT Y APE+ QG D D ++LG +E+ PF + ++
Sbjct: 152 -----KGRAGTPGYMAPEVLQG-EVYDFSVDWFALGCTLYEMIAGRSPFR-QRKEKVEKE 204
Query: 644 DLKQKG-ELPPSWVAKFSEQ-ESLLRRLMSPSPSDR 677
+LK++ E+ + KFS + + L L+ P R
Sbjct: 205 ELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKR 240
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 70.8 bits (174), Expect = 7e-13
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 24/158 (15%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586
Q++EG+ ++H I+HRD+ NI D + +KI DFGLA+ GG
Sbjct: 123 QLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYD----GPPPNPKGGGGG 178
Query: 587 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLK 646
+ T V T +Y PE+ G + D++ +G VF E++ R+ + L+
Sbjct: 179 GTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMF-------TRRPI---LQ 228
Query: 647 QKGELPPSWVAKFSEQESLLRRLM-SPSPSDRPSATEL 683
K ++ +Q L+ +L +P+ P L
Sbjct: 229 GKSDI---------DQLHLIFKLCGTPTEETWPGWRSL 257
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 70.4 bits (172), Expect = 8e-13
Identities = 61/251 (24%), Positives = 111/251 (44%), Gaps = 59/251 (23%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK-DKSLPVNDRILREVATLSRLQ 438
+ + +L+ LG G + V ++KL A+K+IRL+ ++ P +REV+ L L+
Sbjct: 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCT--AIREVSLLKDLK 62
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
H ++V TL ++++ L +
Sbjct: 63 HANIV-----------------------TLHDIVHTDKS-----------------LTLV 82
Query: 499 MEYCPRTLRQVFESYDHFDKELAWHLF-RQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
EY + L+Q + + +F QI+ GLA+ H + ++HRDL P N+ + R +
Sbjct: 83 FEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGE 142
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617
+K+ DFGLA+ + PT T + +V T +Y P++ G + + D
Sbjct: 143 LKLADFGLAR---------AKSVPTKT------YSNEVVTLWYRPPDVLLGSSEYSTQID 187
Query: 618 MYSLGIVFFEL 628
M+ +G +FFE+
Sbjct: 188 MWGVGCIFFEM 198
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 69.9 bits (171), Expect = 8e-13
Identities = 71/313 (22%), Positives = 125/313 (39%), Gaps = 75/313 (23%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRL----KDKSLPVNDRILREVATLSRLQHQHVVR 444
LG G +G V C G+ AVK++ L + +++ EV L L+H ++V+
Sbjct: 8 LGKGAYG-TVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQ 66
Query: 445 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 504
Y GT L+ + I ME+ P
Sbjct: 67 YL-------------------GTC---------------------LDDNTISIFMEFVPG 86
Query: 505 -TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDF 563
++ + + + + +QI++G+A++H ++HRD+ NN+ IK+ DF
Sbjct: 87 GSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDF 146
Query: 564 GLAKFLKLEQLDQDAAFPTDTGGVSVDGT------GQVGTYFYTAPEI--EQGWPKIDEK 615
G A+ L V + GT GT ++ APE+ E G+ + K
Sbjct: 147 GCARRLAW---------------VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGR---K 188
Query: 616 ADMYSLGIVFFEL--WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQE-SLLRRLMSP 672
+D++S+G FE+ P +M+R + + L P FS + ++
Sbjct: 189 SDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTR 248
Query: 673 SPSDRPSATELLQ 685
+RPSA +LL+
Sbjct: 249 DQHERPSALQLLR 261
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Score = 70.5 bits (173), Expect = 8e-13
Identities = 64/251 (25%), Positives = 101/251 (40%), Gaps = 54/251 (21%)
Query: 383 FEELQPLGHGGFGHVVLCKNK--LDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ- 438
+E ++ LG G +G V +N + A+KKI + K + + R LRE+ L +
Sbjct: 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKI-LAKRALRELKLLRHFRG 60
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
H+++ Y D D ++ YLY +
Sbjct: 61 HKNITCLY-----------DMDIVFPGN-----------------------FNELYLYEE 86
Query: 499 -MEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
ME L Q+ S QI+ GL +IH ++HRDL P N+ +A +
Sbjct: 87 LMEA---DLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCE 143
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617
+KI DFGLA+ F + G + T V T +Y APEI + + D
Sbjct: 144 LKICDFGLAR-----------GFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAID 192
Query: 618 MYSLGIVFFEL 628
++S+G + EL
Sbjct: 193 VWSVGCILAEL 203
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332 |
| >gnl|CDD|234586 PRK00037, hisS, histidyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
Score = 71.3 bits (176), Expect = 8e-13
Identities = 89/429 (20%), Positives = 147/429 (34%), Gaps = 128/429 (29%)
Query: 798 HGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYR--RAIGHSP-PNRY---LQGDF 851
GG L L E P +R I ++ FK Y I ++R R P RY Q
Sbjct: 72 KGGRSLTLRPEGTAPVVRAVIEHKLQPFKLYYIGPMFRYER-----PQKGRYRQFHQFGV 126
Query: 852 DIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAE 911
++IG S L +AEV+ + D+L+A+ G+K + +
Sbjct: 127 EVIGSDSPLADAEVIALAA-------------------DILKAL----GLK-GLKLLINS 162
Query: 912 LLAMMGSLRPQSSEWKSKWVVIR---RQLLQEL------NLAEAVVNRLQTVGLR----- 957
L G IR R+ L L E RL+T LR
Sbjct: 163 L----GDF------------EIRANYRKALVGFLEKGLDELDEDSKRRLETNPLRILDKK 206
Query: 958 --FCGAADQALPRLRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNL 1013
+ P+L L D+ +++ +EL L I Y +
Sbjct: 207 DKEDQELLKDAPKLLDYL--DEESKEHFEELKELLDALGIP--------------YVIDP 250
Query: 1014 F------------FQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNP 1061
F+ + GT+ GGRYD L+ + P
Sbjct: 251 RLVRGLDYYTGTVFEFVTDDLGAQ-----GTVCG-GGRYDGLVEQF-----------GGP 293
Query: 1062 P-SGVGASLALETII---QHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEE 1117
P VG ++ +E ++ + E V V G L ++L +L
Sbjct: 294 PTPAVGFAIGVERLLLLLEE--------LGEEPVDVYVVPLGEDAEL-AALKLAEKLRAA 344
Query: 1118 NIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESL 1177
I+ + + L +Q++YA + + ++IL + G V V+ L +++ V + L
Sbjct: 345 GIRVE-LDYGGRKLKKQFKYADKSGARFVLILGEDELANGTVTVKDLRTGEQQTVPLDEL 403
Query: 1178 VRFLLDAIA 1186
V L + +A
Sbjct: 404 VEALKELLA 412
|
Length = 412 |
| >gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Score = 70.8 bits (173), Expect = 9e-13
Identities = 76/300 (25%), Positives = 120/300 (40%), Gaps = 70/300 (23%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
DFE L+ +G G FG V L + K G YA+K ILR+ L + Q H
Sbjct: 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMK--------------ILRKADMLEKEQVGH 47
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
+ E DS+W S ++KL LY+ ME+
Sbjct: 48 IRAERDILVE-------ADSLWVVKMFYSF---------------QDKLN---LYLIMEF 82
Query: 502 CPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 560
P + + D +E + V + IH G IHRD+ P+N+ D++ +K+
Sbjct: 83 LPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKL 142
Query: 561 GDFGLAKFLKLEQLDQ-----DAAFPTDTGGVSVDGT---------------GQVGTYFY 600
DFGL LK + + + P+D +++ VGT Y
Sbjct: 143 SDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDY 202
Query: 601 TAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPF--STAMERQIVLSDLKQKGELPP 653
APE+ + G+ K+ D +SLG++ +E+ + PF T E + + K+ PP
Sbjct: 203 IAPEVFMQTGYNKL---CDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPP 259
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 70.0 bits (171), Expect = 9e-13
Identities = 61/251 (24%), Positives = 106/251 (42%), Gaps = 59/251 (23%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK-DKSLPVNDRILREVATLSRLQ 438
L + +L LG G + V ++KL A+K+IRL+ ++ P +REV+ L L+
Sbjct: 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCT--AIREVSLLKDLK 62
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
H ++V + D+ E L +
Sbjct: 63 HANIVTLH-----------------------------------DIIHTEKSLTLVF---- 83
Query: 499 MEYCPRTLRQVFESYDHFDKELAWHLFR-QIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
EY + L+Q + + LF Q++ GL + H + ++HRDL P N+ + R +
Sbjct: 84 -EYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGE 142
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617
+K+ DFGLA+ + PT T + +V T +Y P+I G + D
Sbjct: 143 LKLADFGLAR---------AKSIPTKT------YSNEVVTLWYRPPDILLGSTDYSTQID 187
Query: 618 MYSLGIVFFEL 628
M+ +G +F+E+
Sbjct: 188 MWGVGCIFYEM 198
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 70.2 bits (172), Expect = 1e-12
Identities = 74/316 (23%), Positives = 124/316 (39%), Gaps = 85/316 (26%)
Query: 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR----LKDKSLPVNDRILREV 431
SS L+DFE + LG G FG V + K+K G +YA+K ++ LK K + + +E
Sbjct: 13 SSWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQV---QHVAQEK 69
Query: 432 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 491
+ L L H +V ++ + EN++
Sbjct: 70 SILMELSHPFIVNMMCSFQD-----------------------------------ENRV- 93
Query: 492 STYLYIQMEYCPRTLRQVFESYDH------FDKELAWHLFRQIVEGLAHIHGQGIIHRDL 545
Y +E+ E + H F ++A ++V ++H + II+RDL
Sbjct: 94 ----YFLLEFVVGG-----ELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDL 144
Query: 546 TPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 605
P N+ D + +K+ DFG AK + D F GT Y APE+
Sbjct: 145 KPENLLLDNKGHVKVTDFGFAKKVP------DRTFTL------------CGTPEYLAPEV 186
Query: 606 EQGWPKIDEKA-DMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSE 661
Q K KA D +++G++ +E + PF +I L + + P+W
Sbjct: 187 IQS--KGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKF-PNWFD--GR 241
Query: 662 QESLLRRLMSPSPSDR 677
L++ L+ + R
Sbjct: 242 ARDLVKGLLQTDHTKR 257
|
Length = 329 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 70.2 bits (172), Expect = 1e-12
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 43/181 (23%)
Query: 523 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPT 582
+ RQI+ G+A++H + I+HRD+ P+N+ ++ ++KI DFG+++ L + +D P
Sbjct: 172 DVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILA-QTMD-----PC 225
Query: 583 DTGGVSVDGTGQVGTYFYTAPE-----IEQGWPKIDEKA-DMYSLGIVFFELW---HPFS 633
++ VGT Y +PE + G D A D++SLG+ E + PF
Sbjct: 226 NS---------SVGTIAYMSPERINTDLNHG--AYDGYAGDIWSLGVSILEFYLGRFPF- 273
Query: 634 TAMERQ---------IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 684
+ RQ I +S Q E P + +F + + P+ R SA +LL
Sbjct: 274 -GVGRQGDWASLMCAICMS---QPPEAPATASREF---RHFISCCLQREPAKRWSAMQLL 326
Query: 685 Q 685
Q
Sbjct: 327 Q 327
|
Length = 353 |
| >gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Score = 68.9 bits (168), Expect = 2e-12
Identities = 82/329 (24%), Positives = 129/329 (39%), Gaps = 66/329 (20%)
Query: 368 GSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRI 427
G ++ P+ + +E ++ +G G +G V NK DG AVK + D V++ I
Sbjct: 13 GLESLGDPT----DTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKIL---DPISDVDEEI 65
Query: 428 LREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQ 486
E L L H +VV++Y +++ G +W L
Sbjct: 66 EAEYNILQSLPNHPNVVKFYGMFYKAD--KLVGGQLWLVLELC----------------- 106
Query: 487 ENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 546
N T L + C + L + SY + L GL H+H IIHRD+
Sbjct: 107 -NGGSVTELVKGLLICGQRLDEAMISYILYGALL----------GLQHLHNNRIIHRDVK 155
Query: 547 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI- 605
NNI +K+ DFG++ L +L ++ + VGT F+ APE+
Sbjct: 156 GNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTS---------------VGTPFWMAPEVI 200
Query: 606 --EQGWP-KIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPS------WV 656
EQ + D + D++SLGI EL + V + K PP+ W
Sbjct: 201 ACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWC 260
Query: 657 AKFSEQESLLRRLMSPSPSDRPSATELLQ 685
F+ + + + RPS T LL+
Sbjct: 261 RSFNH---FISQCLIKDFEARPSVTHLLE 286
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 68.9 bits (169), Expect = 2e-12
Identities = 62/251 (24%), Positives = 109/251 (43%), Gaps = 59/251 (23%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK-DKSLPVNDRILREVATLSRLQ 438
L +++L LG G + V ++KL G+ A+K+IRL+ ++ P +RE + L L+
Sbjct: 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFT--AIREASLLKDLK 61
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
H ++V TL D+ + L T ++
Sbjct: 62 HANIV-----------------------TLH------------DIIHTKKTL--TLVF-- 82
Query: 499 MEYCPRTLRQVFESYDHFDKELAWHLFR-QIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
EY L+Q + LF Q++ GLA+ H + ++HRDL P N+ R +
Sbjct: 83 -EYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGE 141
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617
+K+ DFGLA+ + P+ T + +V T +Y P++ G + D
Sbjct: 142 LKLADFGLAR---------AKSVPSKT------YSNEVVTLWYRPPDVLLGSTEYSTSLD 186
Query: 618 MYSLGIVFFEL 628
M+ +G +F+E+
Sbjct: 187 MWGVGCIFYEM 197
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 68.8 bits (168), Expect = 2e-12
Identities = 71/259 (27%), Positives = 103/259 (39%), Gaps = 67/259 (25%)
Query: 378 RYLNDFEELQPLGHGGFGHVVLCK----NKLDGRHYAVKKIRLKDKSLPVNDRILREVAT 433
RYL ++++ LG G FG V L N G AVK ++ ++ +E+
Sbjct: 4 RYL---KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLK-RECGQQNTSGWKKEINI 59
Query: 434 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLEST 493
L L H+++V+Y G G
Sbjct: 60 LKTLYHENIVKY------KGCCSEQGGKG------------------------------- 82
Query: 494 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLF-RQIVEGLAHIHGQGIIHRDLTPNNIF 551
L + MEY P +LR + +L LF +QI EG+A++H Q IHRDL N+
Sbjct: 83 -LQLIMEYVPLGSLRDYLPKHKLNLAQLL--LFAQQICEGMAYLHSQHYIHRDLAARNVL 139
Query: 552 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPT--DTGGVSVDGTGQVGTYFYTAPEIEQGW 609
D +KIGDFGLAK A P + V DG V F+ A E +
Sbjct: 140 LDNDRLVKIGDFGLAK-----------AVPEGHEYYRVREDGDSPV---FWYAVECLKEN 185
Query: 610 PKIDEKADMYSLGIVFFEL 628
K +D++S G+ +EL
Sbjct: 186 -KFSYASDVWSFGVTLYEL 203
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 69.5 bits (170), Expect = 3e-12
Identities = 43/135 (31%), Positives = 60/135 (44%), Gaps = 29/135 (21%)
Query: 494 YLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 553
Y Y+ P + Q A + +QI+EGL ++H Q IIHRD+ NIF +
Sbjct: 144 YTYLTKRSRPLPIDQ------------ALIIEKQILEGLRYLHAQRIIHRDVKTENIFIN 191
Query: 554 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613
+ + IGD G A+F P G GT APE+ K +
Sbjct: 192 DVDQVCIGDLGAAQF--------PVVAPAF--------LGLAGTVETNAPEV-LARDKYN 234
Query: 614 EKADMYSLGIVFFEL 628
KAD++S GIV FE+
Sbjct: 235 SKADIWSAGIVLFEM 249
|
Length = 357 |
| >gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 69.2 bits (169), Expect = 3e-12
Identities = 84/344 (24%), Positives = 134/344 (38%), Gaps = 73/344 (21%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 448
+G G FG V + K R YA+K + K V + EVA H +
Sbjct: 1 IGKGTFGQVYQVRKKDTRRIYAMKVL---SKKEIVAKK---EVA--------HTIGERNI 46
Query: 449 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY-CPRTLR 507
T + + S + FS + S LY+ +Y L
Sbjct: 47 LVRTLLDE--------SPFIVGLKFSFQTDSD--------------LYLVTDYMSGGELF 84
Query: 508 QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 567
+ F ++ A ++V L H+H I++RDL P NI DA I + DFGL+K
Sbjct: 85 WHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSK 144
Query: 568 FLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI---EQGWPKIDEKADMYSLGIV 624
L + T+T GT Y APE+ E+G+ K D +SLG++
Sbjct: 145 ----ANLTDNKT--TNTF---------CGTTEYLAPEVLLDEKGYTK---HVDFWSLGVL 186
Query: 625 FFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR---- 677
FE+ W PF +Q+ + K P + ++ E ++ L++ +P R
Sbjct: 187 VFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLS--DEGRQFVKGLLNRNPQHRLGAH 244
Query: 678 PSATELLQDALPPQMEYELLDNIL------RMMHSSEDTSIYDK 715
A EL + ++++LL ++ S ED S +D
Sbjct: 245 RDAVELKEHPFFADIDWDLLSKKQITPPFKPIVDSDEDVSNFDP 288
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330 |
| >gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Score = 68.8 bits (168), Expect = 3e-12
Identities = 73/281 (25%), Positives = 110/281 (39%), Gaps = 80/281 (28%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVK----KIRLKDKSLPVNDRILREVATLSR-LQHQHVV 443
+G G FG V+L K K DG YAVK K LK K + I+ E L + L+H +V
Sbjct: 3 IGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKE---QNHIMAERNVLLKNLKHPFLV 59
Query: 444 RYYQAWFETG-----VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
+ + F+T V D+ V G E + ++Q
Sbjct: 60 GLHYS-FQTAEKLYFVLDY-------------------------VNGGE-----LFFHLQ 88
Query: 499 MEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
E C R F + ++ + ++H II+RDL P NI D++ +
Sbjct: 89 RERCFLEPRARFYA-------------AEVASAIGYLHSLNIIYRDLKPENILLDSQGHV 135
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV--GTYFYTAPEIEQGWPKIDEKA 616
+ DFGL K GV + T GT Y APE+ + P D
Sbjct: 136 VLTDFGLCK-----------------EGVEPEETTSTFCGTPEYLAPEVLRKEP-YDRTV 177
Query: 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPS 654
D + LG V +E+ + PF + Q+ + L + +LP
Sbjct: 178 DWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGG 218
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321 |
| >gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Score = 68.2 bits (167), Expect = 4e-12
Identities = 77/323 (23%), Positives = 119/323 (36%), Gaps = 80/323 (24%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND-----RILREVATLS 435
D ++L +G G FG V +K G AVK+IR D R+L ++ +
Sbjct: 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRS------TVDEKEQKRLLMDLDVVM 57
Query: 436 RLQH-QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 494
R ++V++Y A F G W L +
Sbjct: 58 RSSDCPYIVKFYGALFREGDC-------WICMELMDISLDK------------------- 91
Query: 495 LYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFF 552
Y + V+E +E+ + V+ L ++ + IIHRD+ P+NI
Sbjct: 92 FY----------KYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILL 141
Query: 553 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE--IEQGWP 610
D +IK+ DFG++ L D S+ T G Y APE
Sbjct: 142 DRNGNIKLCDFGISGQL------VD----------SIAKTRDAGCRPYMAPERIDPSARD 185
Query: 611 KIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQ--KGE---LPPSWVAKFS-E 661
D ++D++SLGI +E+ P+ V L Q KG+ L S +FS
Sbjct: 186 GYDVRSDVWSLGITLYEVATGKFPYPKWNS---VFDQLTQVVKGDPPILSNSEEREFSPS 242
Query: 662 QESLLRRLMSPSPSDRPSATELL 684
+ + + S RP ELL
Sbjct: 243 FVNFINLCLIKDESKRPKYKELL 265
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 68.1 bits (166), Expect = 4e-12
Identities = 76/305 (24%), Positives = 117/305 (38%), Gaps = 59/305 (19%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQH 441
F + + LG GGFG V C+ + G+ YA K++ K K L E L ++ Q
Sbjct: 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQF 61
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
VV A +ET A ++ G L ++ G E L+ E
Sbjct: 62 VVNLAYA-YETKDALCLVLTIMNGGDLKFHIYN---------MGNPGFEEERALFYAAEI 111
Query: 502 CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 561
GL +H + ++RDL P NI D I+I
Sbjct: 112 LC---------------------------GLEDLHRENTVYRDLKPENILLDDYGHIRIS 144
Query: 562 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621
D GLA +K+ + G S+ G+VGT Y APE+ + D + L
Sbjct: 145 DLGLA--VKIPE------------GESI--RGRVGTVGYMAPEVLNN-QRYTLSPDYWGL 187
Query: 622 GIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDR 677
G + +E+ PF E+ ++ E + AKFSE+ +S+ + L++ P R
Sbjct: 188 GCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQR 247
Query: 678 PSATE 682
E
Sbjct: 248 LGCQE 252
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 67.7 bits (165), Expect = 4e-12
Identities = 75/303 (24%), Positives = 116/303 (38%), Gaps = 65/303 (21%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQH 441
F + + LG GGFG V C+ + G+ YA KK+ K K L E L ++ +
Sbjct: 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRF 61
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
VV A +ET A ++ G L + A
Sbjct: 62 VVSLAYA-YETKDALCLVLTLMNGGDLKFHIYHMGEAG---------------------- 98
Query: 502 CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 561
F++ A +I GL +H + I++RDL P NI D I+I
Sbjct: 99 --------------FEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRIS 144
Query: 562 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621
D GLA + Q + G+VGT Y APE+ + + D ++L
Sbjct: 145 DLGLAVHVPEGQTIK----------------GRVGTVGYMAPEVVKN-ERYTFSPDWWAL 187
Query: 622 GIVFFEL---WHPFST---AMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSP 674
G + +E+ PF ++R+ V +K E+ + KFS SL + L+ P
Sbjct: 188 GCLLYEMIAGQSPFQQRKKKIKREEVERLVK---EVQEEYSEKFSPDARSLCKMLLCKDP 244
Query: 675 SDR 677
+R
Sbjct: 245 KER 247
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 67.7 bits (165), Expect = 5e-12
Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 58/250 (23%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
N FE L +G G +G V+ C++K A+KK + +++ V + LRE+ L L+ +
Sbjct: 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQE 60
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
++V +A+ G LY+ E
Sbjct: 61 NIVELKEAFRRRG----------------------------------------KLYLVFE 80
Query: 501 YCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
Y + + ++ E + +++ +++ Q+++ + H I+HRD+ P N+ + +
Sbjct: 81 YVEKNMLELLEEMPNGVPPEKVRSYIY-QLIKAIHWCHKNDIVHRDIKPENLLISHNDVL 139
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618
K+ DFG A+ L + G + + T V T +Y +PE+ G P + DM
Sbjct: 140 KLCDFGFARNL--------------SEGSNANYTEYVATRWYRSPELLLGAP-YGKAVDM 184
Query: 619 YSLGIVFFEL 628
+S+G + EL
Sbjct: 185 WSVGCILGEL 194
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 67.9 bits (166), Expect = 5e-12
Identities = 58/190 (30%), Positives = 88/190 (46%), Gaps = 27/190 (14%)
Query: 494 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
+L+ MEY L +S FD+ A +I+ GL +H +GII+RDL +N+
Sbjct: 70 HLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLL 129
Query: 553 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612
D IKI DFG+ K E ++ + T GT Y APEI +G K
Sbjct: 130 DKDGHIKIADFGMCK----ENMNGEGKAST-----------FCGTPDYIAPEILKG-QKY 173
Query: 613 DEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELP--PSWVAKFSEQESLLR 667
+E D +S G++ +E+ PF E ++ S L + P P W++K E + L
Sbjct: 174 NESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN---DRPHFPRWISK--EAKDCLS 228
Query: 668 RLMSPSPSDR 677
+L P+ R
Sbjct: 229 KLFERDPTKR 238
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 67.7 bits (165), Expect = 6e-12
Identities = 60/254 (23%), Positives = 107/254 (42%), Gaps = 65/254 (25%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK-DKSLPVNDRILREVATLSRLQ 438
L + +L LG G + V ++KL A+K+IRL+ ++ P +REV+ L L+
Sbjct: 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCT--AIREVSLLKNLK 61
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
H ++V TL + R L +
Sbjct: 62 HANIV-----------------------TLHDIIHTERC-----------------LTLV 81
Query: 499 MEYCPRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDA 554
EY L+Q D+ ++ H + Q++ GL++ H + I+HRDL P N+ +
Sbjct: 82 FEYLDSDLKQYL---DNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINE 138
Query: 555 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614
+ ++K+ DFGLA+ + PT T + +V T +Y P++ G +
Sbjct: 139 KGELKLADFGLAR---------AKSVPTKT------YSNEVVTLWYRPPDVLLGSTEYST 183
Query: 615 KADMYSLGIVFFEL 628
DM+ +G + +E+
Sbjct: 184 PIDMWGVGCILYEM 197
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 67.5 bits (165), Expect = 6e-12
Identities = 75/319 (23%), Positives = 127/319 (39%), Gaps = 78/319 (24%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
D E + LG G G V K+ G A K + + KS V +ILRE+ + + +
Sbjct: 6 DLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKS-SVRKQILRELQIMHECRSPY 64
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
+V +Y A+ L + + ME+
Sbjct: 65 IVSFYGAF----------------------------------------LNENNICMCMEF 84
Query: 502 CPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-QGIIHRDLTPNNIFFDARNDIK 559
+L ++++ E+ + +VEGL +++ I+HRD+ P+NI ++R IK
Sbjct: 85 MDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIK 144
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ--VGTYFYTAPEIEQGWPKIDEKAD 617
+ DFG++ G ++ VGT Y +PE QG K K+D
Sbjct: 145 LCDFGVS-------------------GELINSIADTFVGTSTYMSPERIQG-GKYTVKSD 184
Query: 618 MYSLGIVFFELW---HPFSTAMER------QIVLSDLKQK--GELPPSWVA-KFSEQ-ES 664
++SLGI EL PF+ + + + DL Q+ E PP + F E
Sbjct: 185 VWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRD 244
Query: 665 LLRRLMSPSPSDRPSATEL 683
+ + P++RP+ +L
Sbjct: 245 FVDACLLKDPTERPTPQQL 263
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|213530 TIGR00442, hisS, histidyl-tRNA synthetase | Back alignment and domain information |
|---|
Score = 68.6 bits (169), Expect = 6e-12
Identities = 94/452 (20%), Positives = 157/452 (34%), Gaps = 106/452 (23%)
Query: 751 DTELRDYVVQVTKEMFRQHCAKHLEIE-PMYLLGDCPQFKRNT------VK-----LLTH 798
+ Y+ + +E+F + K EI P+ F R V+
Sbjct: 13 EMIKWQYIEETIREVFELYGFK--EIRTPI--FEYTELFARKVGEETDIVEKEMYTFKDK 68
Query: 799 GGDLLELSHELRLPFIRWAISN---QKSSFKRYEISSVYRRAIGHSPP--NRY---LQGD 850
GG L L E P R I N FK Y I ++R + P RY Q
Sbjct: 69 GGRSLTLRPEGTAPVARAVIENKLLLPKPFKLYYIGPMFR----YERPQKGRYRQFHQFG 124
Query: 851 FDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVA 910
++IG S L +AE++ + +I+ + + +N +LE E+RE +
Sbjct: 125 VEVIGSDSPLADAEIIALAAEILKA-LGIKDFTLEINSLGILEGR-------LEYREALL 176
Query: 911 ELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRF--CGA-ADQAL- 966
L + L +L E V RL+ LR Q L
Sbjct: 177 RYL---------------------DKHLDKLG--EDSVRRLEKNPLRILDSKNEKIQELL 213
Query: 967 ---PRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIE---------SYHRNLF 1014
P++ L + +R +EL +DAL P Y+
Sbjct: 214 KEAPKILDFLDEE--SRAHFEELKE---------LLDALGIPYVIDPSLVRGLDYYTGTV 262
Query: 1015 FQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPP-SGVGASLALET 1073
F+ + + A +G++ GGRYD L+ + PP VG ++ +E
Sbjct: 263 FEFVT--DGLGA---QGSICG-GGRYDGLVEEL-----------GGPPTPAVGFAIGIER 305
Query: 1074 IIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTE 1133
++ E+ V V G L E ++L +L + I+ + L +
Sbjct: 306 LLLLLEELGLLPPEESSPDVYVVPLGEEAEL-EALKLAQKLRKAGIRVEVDLGGR-KLKK 363
Query: 1134 QYEYASEHDIKCLVILTDTGAQKGLVKVRHLD 1165
Q +YA + + VI+ + G V ++ L
Sbjct: 364 QLKYADKLGARFAVIIGEDELANGTVTLKDLR 395
|
This model finds a histidyl-tRNA synthetase in every completed genome. Apparent second copies from Bacillus subtilis, Synechocystis sp., and Aquifex aeolicus are slightly shorter, more closely related to each other than to other hisS proteins, and actually serve as regulatory subunits for an enzyme of histidine biosynthesis. They were excluded from the seed alignment and score much lower than do single copy histidyl-tRNA synthetases of other genomes not included in the seed alignment. These putative second copies of HisS score below the trusted cutoff. The regulatory protein kinase GCN2 of Saccharomyces cerevisiae (YDR283c), and related proteins from other species designated eIF-2 alpha kinase, have a domain closely related to histidyl-tRNA synthetase that may serve to detect and respond to uncharged tRNA(his), an indicator of amino acid starvation; these regulatory proteins are not orthologous and so score below the noise cutoff [Protein synthesis, tRNA aminoacylation]. Length = 397 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 67.8 bits (165), Expect = 7e-12
Identities = 80/331 (24%), Positives = 131/331 (39%), Gaps = 73/331 (22%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQH 441
F +L+ +GHG FG V ++ A+KK+ K S I++EV L R++H +
Sbjct: 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPN 86
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
+ Y + A ++ MEY
Sbjct: 87 SIEYKGCYLREHTA----------------------------------------WLVMEY 106
Query: 502 CPRTLRQVFESYDHFDKELAWHLFRQ-IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 560
C + + E + +E+ ++GLA++H +IHRD+ NI +K+
Sbjct: 107 CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKL 166
Query: 561 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----EQGWPKIDEKA 616
DFG A A P ++ VGT ++ APE+ ++G + D K
Sbjct: 167 ADFGSASI----------ASPANSF---------VGTPYWMAPEVILAMDEG--QYDGKV 205
Query: 617 DMYSLGIVFFELWH--PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPS 673
D++SLGI EL P M L + Q E P ++S+ + + +
Sbjct: 206 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-ESPTLQSNEWSDYFRNFVDSCLQKI 264
Query: 674 PSDRPSATELLQD--ALPPQMEYELLDNILR 702
P DRP++ ELL+ L + E L+D I R
Sbjct: 265 PQDRPTSEELLKHMFVLRERPETVLIDLIQR 295
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 67.4 bits (165), Expect = 9e-12
Identities = 55/187 (29%), Positives = 87/187 (46%), Gaps = 23/187 (12%)
Query: 495 LYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 553
L+ MEY L + FD+ A +IV GL +H +GII+RDL +N+ D
Sbjct: 71 LFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLD 130
Query: 554 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613
+ IKI DFG+ K E + GGV+ + GT Y APEI P
Sbjct: 131 SEGHIKIADFGMCK----EGI---------LGGVTT--STFCGTPDYIAPEILSYQP-YG 174
Query: 614 EKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 670
D ++LG++ +E+ PF E + + + + P W++K E +S+L+ +
Sbjct: 175 PAVDWWALGVLLYEMLAGQSPFEGDDEDE-LFQSILEDEVRYPRWLSK--EAKSILKSFL 231
Query: 671 SPSPSDR 677
+ +P R
Sbjct: 232 TKNPEKR 238
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 67.0 bits (163), Expect = 1e-11
Identities = 74/314 (23%), Positives = 125/314 (39%), Gaps = 75/314 (23%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR---ILREVATLSRLQH 439
F +L+ +GHG FG V ++ + A+KK+ K N++ I++EV L +L+H
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ--SNEKWQDIIKEVRFLQKLRH 74
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
+ ++Y + A ++ M
Sbjct: 75 PNTIQYRGCYLREHTA----------------------------------------WLVM 94
Query: 500 EYCPRTLRQVFESYDHFDKELAWHLFRQ-IVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
EYC + + E + +E+ ++GLA++H +IHRD+ NI +
Sbjct: 95 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLV 154
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----EQGWPKIDE 614
K+GDFG A + P + VGT ++ APE+ ++G + D
Sbjct: 155 KLGDFGSASIMA----------PANXF---------VGTPYWMAPEVILAMDEG--QYDG 193
Query: 615 KADMYSLGIVFFELWH--PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMS 671
K D++SLGI EL P M L + Q E P +SE + + +
Sbjct: 194 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-ESPALQSGHWSEYFRNFVDSCLQ 252
Query: 672 PSPSDRPSATELLQ 685
P DRP++ LL+
Sbjct: 253 KIPQDRPTSEVLLK 266
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Score = 66.9 bits (163), Expect = 1e-11
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 514 DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQ 573
D+F ++ +I+ L H+H GI++RD+ NI D+ + + DFGL+K E+
Sbjct: 100 DNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEE 159
Query: 574 LDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---H 630
++ +F GT Y APEI +G + D +SLGI+ FEL
Sbjct: 160 KERTYSF--------------CGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGAS 205
Query: 631 PFSTAMERQIVLSDLKQKGELPPSWVAKFS-EQESLLRRLMSPSPSDRPSA 680
PF+ ER ++ + P + + E + LL +L+ P R A
Sbjct: 206 PFTLEGERNTQSEVSRRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGA 256
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 66.3 bits (161), Expect = 2e-11
Identities = 59/252 (23%), Positives = 110/252 (43%), Gaps = 63/252 (25%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQH 439
+ +E+L+ LG G + V K+K++G+ A+K IRL+++ P +RE + L L+H
Sbjct: 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFT--AIREASLLKGLKH 62
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
++V + D+ + L + Y+
Sbjct: 63 ANIVLLH-----------------------------------DIIHTKETLTLVFEYVHT 87
Query: 500 EYCPRTLRQVFESYD---HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 556
+ C Q + + H + + LF Q++ GL++IH + I+HRDL P N+
Sbjct: 88 DLC-----QYMDKHPGGLHPEN-VKLFLF-QLLRGLSYIHQRYILHRDLKPQNLLISDTG 140
Query: 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616
++K+ DFGLA+ + P+ T + +V T +Y P++ G +
Sbjct: 141 ELKLADFGLAR---------AKSVPSHT------YSNEVVTLWYRPPDVLLGSTEYSTCL 185
Query: 617 DMYSLGIVFFEL 628
DM+ +G +F E+
Sbjct: 186 DMWGVGCIFVEM 197
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 65.9 bits (161), Expect = 2e-11
Identities = 79/327 (24%), Positives = 129/327 (39%), Gaps = 90/327 (27%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
DFE+L LG G G V ++ G A K I L+ K + ++I+RE+ L +
Sbjct: 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKP-AIRNQIIRELKVLHECNSPY 60
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
+V +Y A++ DG+ + I ME+
Sbjct: 61 IVGFYGAFYS------DGE----------------------------------ISICMEH 80
Query: 502 CPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARNDIK 559
+L QV + + + + ++ GL ++ + I+HRD+ P+NI ++R +IK
Sbjct: 81 MDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIK 140
Query: 560 IGDFGLAKFLKLEQLDQDA-AFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618
+ DFG++ L +D A +F VGT Y +PE QG ++D+
Sbjct: 141 LCDFGVSGQL----IDSMANSF--------------VGTRSYMSPERLQG-THYTVQSDI 181
Query: 619 YSLGIVFFELWH-----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 673
+SLG+ E+ P A E + + +GE S R +S
Sbjct: 182 WSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKES------------HRPVSGH 229
Query: 674 PSDRPSATELLQDALPPQMEYELLDNI 700
P D P P +ELLD I
Sbjct: 230 PPDSP----------RPMAIFELLDYI 246
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 65.4 bits (160), Expect = 3e-11
Identities = 75/332 (22%), Positives = 130/332 (39%), Gaps = 95/332 (28%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-VNDRILREVATLSRLQ-HQHVVRYY 446
+G G F V+ +++ G++YA+K ++ KSL VN+ LRE+ L RL H +++R
Sbjct: 7 IGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNN--LREIQALRRLSPHPNILRLI 64
Query: 447 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTL 506
+ F D G L E + Y I +
Sbjct: 65 EVLF---------DRKTGRLALVF----------------ELMDMNLYELI------KGR 93
Query: 507 RQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLA 566
++ ++ Q+++ L H+H GI HRD+ P NI + +K+ DFG
Sbjct: 94 KR------PLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSC 146
Query: 567 KFLKLEQLDQDAAFPTDTGGVSVDG--TGQVGTYFYTAPE--IEQGWPKIDEKADMYSLG 622
+ G+ T + T +Y APE + G+ K D++++G
Sbjct: 147 R------------------GIYSKPPYTEYISTRWYRAPECLLTDGY--YGPKMDIWAVG 186
Query: 623 IVFFEL--WHP-FSTAME-RQI-------------VLSDLKQKGEL-------PPSWVAK 658
VFFE+ P F E QI VL ++ + + + K
Sbjct: 187 CVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRK 246
Query: 659 F-----SEQESLLRRLMSPSPSDRPSATELLQ 685
+E LL++L++ P +R +A + L+
Sbjct: 247 LLPNASAEGLDLLKKLLAYDPDERITAKQALR 278
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Score = 67.8 bits (165), Expect = 3e-11
Identities = 68/260 (26%), Positives = 121/260 (46%), Gaps = 37/260 (14%)
Query: 452 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE 511
+GV++F D GS +L+ + R+ + G + L+ + +E +LRQ +
Sbjct: 16 SGVSEFCTD---GSKSLSHIDYV-RSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLD 71
Query: 512 SYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTP--------NNIFF---------- 552
+ D D +H+FRQIVE + H QGI+ ++ P N++ F
Sbjct: 72 NPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 131
Query: 553 -DARNDIKIGDFGLAKF------LKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 605
D K + G ++ ++E+L++ P + + +YT+PE
Sbjct: 132 SDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILA-----MEMSWYTSPEE 186
Query: 606 EQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESL 665
+ G + +D+Y LG++ FEL+ P S+ E+ +S L+ + LPP + + ++ S
Sbjct: 187 DNG-SSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHR-VLPPQILLNWPKEASF 244
Query: 666 LRRLMSPSPSDRPSATELLQ 685
L+ P PS RPS +ELLQ
Sbjct: 245 CLWLLHPEPSCRPSMSELLQ 264
|
Length = 793 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 65.3 bits (159), Expect = 3e-11
Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 22/167 (13%)
Query: 516 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD 575
F + A QI+ GL H+H + II+RDL P N+ D +++I D GLA LK Q
Sbjct: 94 FPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ-- 151
Query: 576 QDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PF 632
+ T G + GT + APE+ QG + D D ++LG+ +E+ PF
Sbjct: 152 ------SKTKGYA-------GTPGFMAPELLQG-EEYDFSVDYFALGVTLYEMIAARGPF 197
Query: 633 STAMERQIVLSDLKQKG-ELPPSWVAKFSEQ-ESLLRRLMSPSPSDR 677
E+ + +LKQ+ ++ KFS +S L++ P R
Sbjct: 198 RARGEK-VENKELKQRILNDSVTYPDKFSPASKSFCEALLAKDPEKR 243
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|238436 cd00859, HisRS_anticodon, HisRS Histidyl-anticodon binding domain | Back alignment and domain information |
|---|
Score = 59.9 bits (146), Expect = 4e-11
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 1090 GTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVIL 1149
V V G G L E +EL +L + IKA+ L +Q++YA + VIL
Sbjct: 1 EVDVYVVPLGEG-ALSEALELAEQLRDAGIKAEIDYG-GRKLKKQFKYADRSGARFAVIL 58
Query: 1150 TDTGAQKGLVKVRHLDVKKEKEVQRESLVRFL 1181
+ G+V V+ L+ +++ V + LV L
Sbjct: 59 GEDELAAGVVTVKDLETGEQETVALDELVEEL 90
|
HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only. Length = 91 |
| >gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Score = 65.8 bits (160), Expect = 5e-11
Identities = 77/315 (24%), Positives = 119/315 (37%), Gaps = 70/315 (22%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
+DFE L+ +G G FG V L + K G YA+K ILR+ L + Q
Sbjct: 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMK--------------ILRKADMLEKEQVA 46
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
H+ E D W S F ++ LY+ ME
Sbjct: 47 HIRAERDILVE-------ADGAWVVKMFYS--FQDKRN----------------LYLIME 81
Query: 501 YCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
+ P + + D +E + V + IH G IHRD+ P+N+ DA+ +K
Sbjct: 82 FLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVK 141
Query: 560 IGDFGLAKFLKLEQLDQ-----------DAAFPTDTGGVSVD---------GTGQVGTYF 599
+ DFGL LK + D +F + VGT
Sbjct: 142 LSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPD 201
Query: 600 YTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPF--STAMERQIVLSDLKQKGELP 652
Y APE+ + G+ K+ D +SLG++ +E+ + PF T E + + K+ P
Sbjct: 202 YIAPEVFMQTGYNKL---CDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFP 258
Query: 653 PSWVAKFSEQESLLR 667
P ++ +LR
Sbjct: 259 PEVPISEKAKDLILR 273
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360 |
| >gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Score = 65.2 bits (159), Expect = 5e-11
Identities = 64/263 (24%), Positives = 102/263 (38%), Gaps = 63/263 (23%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
DF+ +G G FG V + + K G YA+K + K L L +
Sbjct: 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVM--KKSVL---------------LAQE 43
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
V + + + D + S ++ Q+ LY+ ME
Sbjct: 44 TVSFFEE----------ERDIL--------SISNSPWIPQLQYAFQDKD----NLYLVME 81
Query: 501 YCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
Y P L + Y D FD+++A ++V + +H G +HRD+ P N+ D I
Sbjct: 82 YQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHI 141
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ---GWPK--ID 613
K+ DFG A +L + V+ VGT Y APE+ G K
Sbjct: 142 KLADFGSAA-----RLTANK---------MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYG 187
Query: 614 EKADMYSLGIVFFELWH---PFS 633
+ D +SLG++ +E+ + PF
Sbjct: 188 VECDWWSLGVIAYEMIYGRSPFH 210
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 64.7 bits (157), Expect = 6e-11
Identities = 76/335 (22%), Positives = 129/335 (38%), Gaps = 77/335 (22%)
Query: 365 VDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN 424
V G P YL+ F ++ G G G V + K G+ AVKK+ L+ +
Sbjct: 15 VSPGDPR------EYLDSFIKI---GEGSTGIVCIATEKHTGKQVAVKKMDLRKQQR--R 63
Query: 425 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 484
+ + EV + H++VV Y ++ GD +W
Sbjct: 64 ELLFNEVVIMRDYHHENVVDMYNSYLV-------GDELW--------------------- 95
Query: 485 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544
+ ME+ ++ ++E + ++ L+++H QG+IHRD
Sbjct: 96 ------------VVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRD 143
Query: 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 604
+ ++I + IK+ DFG + E + + VGT ++ APE
Sbjct: 144 IKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSL---------------VGTPYWMAPE 188
Query: 605 IEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQES 664
+ P E D++SLGI+ E+ + + + + LPP V + S
Sbjct: 189 VISRLPYGTE-VDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPR-VKDSHKVSS 246
Query: 665 LLRR----LMSPSPSDRPSATELLQD-----ALPP 690
+LR ++ PS R +A ELLQ A PP
Sbjct: 247 VLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPP 281
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 64.7 bits (157), Expect = 6e-11
Identities = 74/317 (23%), Positives = 117/317 (36%), Gaps = 81/317 (25%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR---ILREVATLSRLQH 439
F L +GHG FG V N AVKK+ K N++ I++EV L +L+H
Sbjct: 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQT--NEKWQDIIKEVKFLQQLKH 80
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
+ + Y + + A ++ M
Sbjct: 81 PNTIEYKGCYLKEHTA----------------------------------------WLVM 100
Query: 500 EYCPRTLRQVFESYDHFDKELAWHLFRQ-IVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
EYC + + E + +E+ ++GLA++H +IHRD+ NI +
Sbjct: 101 EYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQV 160
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----EQGWPKIDE 614
K+ DFG A S VGT ++ APE+ ++G + D
Sbjct: 161 KLADFGSAS-------------------KSSPANSFVGTPYWMAPEVILAMDEG--QYDG 199
Query: 615 KADMYSLGIVFFELWH--PFSTAMERQIVLSDLKQKGELPP----SWVAKFSEQESLLRR 668
K D++SLGI EL P M L + Q + P W F +
Sbjct: 200 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-DSPTLQSNEWTDSF---RGFVDY 255
Query: 669 LMSPSPSDRPSATELLQ 685
+ P +RP++ ELL+
Sbjct: 256 CLQKIPQERPASAELLR 272
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Score = 64.3 bits (156), Expect = 6e-11
Identities = 66/314 (21%), Positives = 128/314 (40%), Gaps = 69/314 (21%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--RILREVATLSRLQH 439
DFE +Q +G G +G V +N G A+K I+L+ P D + +E+ + +H
Sbjct: 10 DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLE----PGEDFAVVQQEIIMMKDCKH 65
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
++V Y+ ++ D +W I M
Sbjct: 66 SNIVAYFGSYLRR-------DKLW---------------------------------ICM 85
Query: 500 EYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
E+C +L+ ++ + ++ R+ ++GL ++H +G +HRD+ NI +
Sbjct: 86 EFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHV 145
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK--IDEKA 616
K+ DFG++ + + + +F +GT ++ APE+ K ++
Sbjct: 146 KLADFGVSAQIT-ATIAKRKSF--------------IGTPYWMAPEVAAVERKGGYNQLC 190
Query: 617 DMYSLGIVFFEL--WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQES---LLRRLMS 671
D++++GI EL P + L + + PP K S ++ ++
Sbjct: 191 DIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALT 250
Query: 672 PSPSDRPSATELLQ 685
+P RP+A +LLQ
Sbjct: 251 KNPKKRPTAEKLLQ 264
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 63.9 bits (156), Expect = 6e-11
Identities = 41/168 (24%), Positives = 61/168 (36%), Gaps = 49/168 (29%)
Query: 410 AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLA 469
AVK ++ DK + D L+E A + L H++++R Y GV
Sbjct: 27 AVKCLK-SDKLSDIMDDFLKEAAIMHSLDHENLIRLY------GVV-------------- 65
Query: 470 SSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-----TLRQVFESYDHFDKELAWHL 524
VT E P LR+ ++ HF
Sbjct: 66 ------LTHPLMMVT---------------ELAPLGSLLDRLRK--DALGHFLISTLCDY 102
Query: 525 FRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLE 572
QI G+ ++ + IHRDL NI + + +KIGDFGL + L
Sbjct: 103 AVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQN 150
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 6e-11
Identities = 62/265 (23%), Positives = 94/265 (35%), Gaps = 86/265 (32%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 439
+ + +G G FG V+L G+ AVK LKD S L E + ++ L+H
Sbjct: 5 SKELKLGATIGKGEFGDVML--GDYRGQKVAVKC--LKDDSTAA-QAFLAEASVMTTLRH 59
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
++V+ GV G+ LYI
Sbjct: 60 PNLVQL------LGVV-LQGNP---------------------------------LYIVT 79
Query: 500 EYCP--------RTL-RQVFESYDHFDKELAWHLF-RQIVEGLAHIHGQGIIHRDLTPNN 549
EY R+ R V F + EG+ ++ + +HRDL N
Sbjct: 80 EYMAKGSLVDYLRSRGRAVITLAQQ-------LGFALDVCEGMEYLEEKNFVHRDLAARN 132
Query: 550 IFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQG 608
+ K+ DFGLAK Q D+G + V +TAPE + +
Sbjct: 133 VLVSEDLVAKVSDFGLAKEASQGQ---------DSGKLPVK---------WTAPEALREK 174
Query: 609 WPKIDEKADMYSLGIVFFELWHPFS 633
K K+D++S GI+ LW +S
Sbjct: 175 --KFSTKSDVWSFGIL---LWEIYS 194
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 64.5 bits (157), Expect = 6e-11
Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 27/169 (15%)
Query: 516 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD 575
FD+E A +I GL +H + I++RDL P NI D I+I D GLA + +
Sbjct: 99 FDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETI 158
Query: 576 QDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PF 632
+ G+VGT Y APE+ + + D + LG + +E+ PF
Sbjct: 159 R----------------GRVGTVGYMAPEVVKN-ERYTFSPDWWGLGCLIYEMIEGKSPF 201
Query: 633 STAME---RQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDR 677
E R+ V +K E + KFSE S+ R+L++ P R
Sbjct: 202 RQRKEKVKREEVERRVK---EDQEEYSEKFSEAARSICRQLLTKDPGFR 247
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Score = 64.3 bits (156), Expect = 7e-11
Identities = 51/157 (32%), Positives = 70/157 (44%), Gaps = 26/157 (16%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586
+I+ GL H+H + +++RDL P NI D ++I D GLA D P
Sbjct: 105 EIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKKP----- 152
Query: 587 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PF---STAMERQI 640
VGT+ Y APE+ Q D AD +SLG + F+L PF T + +I
Sbjct: 153 -----HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 207
Query: 641 VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677
L ELP S+ E +SLL L+ S R
Sbjct: 208 DRMTLTVNVELPDSFS---PELKSLLEGLLQRDVSKR 241
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279 |
| >gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 64.4 bits (157), Expect = 1e-10
Identities = 79/308 (25%), Positives = 124/308 (40%), Gaps = 72/308 (23%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
+DFE L+ +G G FG V + K K G+ YA+K IL + L R +
Sbjct: 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMK--------------ILNKWEMLKRAE-- 44
Query: 441 HVVRYYQAWF--ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
A F E V GD W ++ Q+ LY+
Sbjct: 45 ------TACFREERDVLVN-GDRRW--------------ITNLHYAFQDEN----NLYLV 79
Query: 499 MEYCP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 554
M+Y TL FE D +++A ++V + +H G +HRD+ P+N+ D
Sbjct: 80 MDYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDK 137
Query: 555 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----EQGWP 610
I++ DFG L+L G +V VGT Y +PEI E G
Sbjct: 138 NGHIRLADFG--SCLRL-----------LADG-TVQSNVAVGTPDYISPEILQAMEDGKG 183
Query: 611 KIDEKADMYSLGIVFFELWH---PF--STAMERQIVLSDLKQKGELPPSWVAKFSEQESL 665
+ + D +SLG+ +E+ + PF + +E + + K+ + PP E + L
Sbjct: 184 RYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDL 243
Query: 666 LRRLMSPS 673
+RRL+
Sbjct: 244 IRRLICSP 251
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331 |
| >gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 1e-10
Identities = 89/367 (24%), Positives = 147/367 (40%), Gaps = 95/367 (25%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
DFE ++ + +G +G V L ++K + +A+KKI + ILR Q Q
Sbjct: 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKIN-------KQNLILRN-------QIQ 46
Query: 441 HVVRYYQAWFETGVADFDGD----SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 496
Q + E + F + SM+ S F + +L
Sbjct: 47 ------QVFVERDILTFAENPFVVSMFCS-------FETK----------------RHLC 77
Query: 497 IQMEY-----CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 551
+ MEY C L+ + ++A F + V L ++H GI+HRDL P+N+
Sbjct: 78 MVMEYVEGGDCATLLKNI----GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLL 133
Query: 552 FDARNDIKIGDFGLAKF--------LKLEQLDQDAAFPTDTGGVSVDGTGQV-GTYFYTA 602
+ IK+ DFGL+K L +++D D QV GT Y A
Sbjct: 134 ITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDK---------QVCGTPEYIA 184
Query: 603 PEI--EQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVA 657
PE+ QG+ K D +++GI+ +E PF ++ + E P A
Sbjct: 185 PEVILRQGYGK---PVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEA 241
Query: 658 KFSEQESLLRRLMSPSPSDR---PSATELLQDALPPQMEYELLDNILRM-------MHSS 707
++ + L+ RL+ +P +R A E+ Q +++ L LR + S
Sbjct: 242 LPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDWNGL---LRQKAEFIPQLESE 298
Query: 708 EDTSIYD 714
+DTS +D
Sbjct: 299 DDTSYFD 305
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305 |
| >gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Score = 64.3 bits (156), Expect = 1e-10
Identities = 80/308 (25%), Positives = 132/308 (42%), Gaps = 78/308 (25%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
+DFE ++ +G G FG V + K K R YA+K + + +L+ T + +
Sbjct: 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWE--------MLKRAETACFREER 52
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
+V+ +GD W T F + EN YLY+ M+
Sbjct: 53 NVL-------------VNGDCQWI--TTLHYAFQD-----------EN-----YLYLVMD 81
Query: 501 YCP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 556
Y TL FE D +++A ++V + IH +HRD+ P+N+ D
Sbjct: 82 YYVGGDLLTLLSKFE--DRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNG 139
Query: 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ----VGTYFYTAPEI----EQG 608
I++ DFG LK+ Q DGT Q VGT Y +PEI E G
Sbjct: 140 HIRLADFG--SCLKMNQ----------------DGTVQSSVAVGTPDYISPEILQAMEDG 181
Query: 609 WPKIDEKADMYSLGIVFFELWH---PF--STAMERQIVLSDLKQKGELPPSWVAKFSEQ- 662
K + D +SLG+ +E+ + PF + +E + + +++ + PS + SE+
Sbjct: 182 MGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQF-PSHITDVSEEA 240
Query: 663 ESLLRRLM 670
+ L++RL+
Sbjct: 241 KDLIQRLI 248
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331 |
| >gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Score = 63.1 bits (153), Expect = 1e-10
Identities = 71/321 (22%), Positives = 133/321 (41%), Gaps = 83/321 (25%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK---DKSLPVNDRILREVATLSRL 437
+D+E +Q +G G +G V +N G AVK I+L+ D SL I +E+ +
Sbjct: 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSL-----IQQEIFMVKEC 63
Query: 438 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
+H ++V Y+ ++ L L+I
Sbjct: 64 KHCNIVAYFGSY----------------------------------------LSREKLWI 83
Query: 498 QMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 556
MEYC +L+ ++ + ++ R+ ++GLA++H +G +HRD+ NI
Sbjct: 84 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNG 143
Query: 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ-----GWPK 611
D+K+ DFG+A + + + +F +GT ++ APE+ G+ +
Sbjct: 144 DVKLADFGVAAKIT-ATIAKRKSF--------------IGTPYWMAPEVAAVEKNGGYNQ 188
Query: 612 IDEKADMYSLGIVFFEL--WHPFSTAMERQIVLSDLKQKGELPP------SWVAKFSEQE 663
+ D++++GI EL P + L + + PP W + F
Sbjct: 189 L---CDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTF---H 242
Query: 664 SLLRRLMSPSPSDRPSATELL 684
+ ++ ++ +P RP+A LL
Sbjct: 243 NFVKISLTKNPKKRPTAERLL 263
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 63.0 bits (153), Expect = 2e-10
Identities = 50/157 (31%), Positives = 69/157 (43%), Gaps = 26/157 (16%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586
+I+ GL H+H + +++RDL P NI D ++I D GLA D P
Sbjct: 105 EIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKKP----- 152
Query: 587 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PF---STAMERQI 640
VGT+ Y APE+ Q D AD +SLG + F+L PF T + +I
Sbjct: 153 -----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 207
Query: 641 VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677
L ELP S+ E SLL L+ + R
Sbjct: 208 DRMTLTMAVELPDSFS---PELRSLLEGLLQRDVNRR 241
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 2e-10
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 14/103 (13%)
Query: 526 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTG 585
R+++E LA++HG+GIIHRD+ NIF D + +GDFG A +LD P
Sbjct: 192 RRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAAC-----KLDAHPDTPQC-- 244
Query: 586 GVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 628
G GT +PE+ P K D++S G+V FE+
Sbjct: 245 ------YGWSGTLETNSPELLALDPYC-AKTDIWSAGLVLFEM 280
|
Length = 392 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 3e-10
Identities = 74/332 (22%), Positives = 128/332 (38%), Gaps = 86/332 (25%)
Query: 365 VDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN 424
VD G P YL++F ++ G G G V + +K GR AVKK+ L+ +
Sbjct: 12 VDPGDPR------SYLDNFVKI---GEGSTGIVCIATDKSTGRQVAVKKMDLRKQQR--R 60
Query: 425 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 484
+ + EV + QH ++V Y ++ GD +W
Sbjct: 61 ELLFNEVVIMRDYQHPNIVEMYSSYLV-------GDELW--------------------- 92
Query: 485 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544
+ ME+ ++ ++E + +++ L+ +H QG+IHRD
Sbjct: 93 ------------VVMEFLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRD 140
Query: 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ---VGTYFYT 601
+ ++I + +K+ DFG VS + + VGT ++
Sbjct: 141 IKSDSILLTSDGRVKLSDFGFC------------------AQVSKEVPRRKSLVGTPYWM 182
Query: 602 APEIEQGWPKIDEKADMYSLGIVFFELWH---PFST-----AMERQIVLSDLKQKGELPP 653
APE+ P + D++SLGI+ E+ P+ AM+R + D
Sbjct: 183 APEVISRLP-YGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKR---IRDNLPPKLKNL 238
Query: 654 SWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685
V+ S L R++ P+ R +A ELL
Sbjct: 239 HKVS--PRLRSFLDRMLVRDPAQRATAAELLN 268
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 62.3 bits (151), Expect = 4e-10
Identities = 75/331 (22%), Positives = 130/331 (39%), Gaps = 84/331 (25%)
Query: 365 VDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN 424
VD G P YL++F ++ G G G V + K G+ AVKK+ L+ +
Sbjct: 13 VDPGDPRT------YLDNFIKI---GEGSTGIVCIATVKSSGKLVAVKKMDLRKQQR--R 61
Query: 425 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 484
+ + EV + QH++VV Y ++ GD +W
Sbjct: 62 ELLFNEVVIMRDYQHENVVEMYNSYLV-------GDELW--------------------- 93
Query: 485 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544
+ ME+ ++ ++E + +++ L+ +H QG+IHRD
Sbjct: 94 ------------VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRD 141
Query: 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 604
+ ++I +K+ DFG + E + + VGT ++ APE
Sbjct: 142 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL---------------VGTPYWMAPE 186
Query: 605 IEQGWPKIDEKADMYSLGIVFFELWH---PF-------STAMERQIVLSDLKQKGELPPS 654
+ P E D++SLGI+ E+ P+ + M R + LK ++ PS
Sbjct: 187 LISRLPYGPE-VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPS 245
Query: 655 WVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685
+ L RL+ P+ R +A ELL+
Sbjct: 246 L-------KGFLDRLLVRDPAQRATAAELLK 269
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Score = 62.9 bits (153), Expect = 4e-10
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 23/141 (16%)
Query: 494 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLF--RQIVEGLAHIHGQGIIHRDLTPNNI 550
YLY+ MEY P L + +YD +K W F ++V L IH G IHRD+ P+N+
Sbjct: 117 YLYMVMEYMPGGDLVNLMSNYDIPEK---WARFYTAEVVLALDAIHSMGFIHRDVKPDNM 173
Query: 551 FFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI---EQ 607
D +K+ DFG ++D + DT VGT Y +PE+ +
Sbjct: 174 LLDKSGHLKLADFGTCM-----KMDANGMVRCDTA---------VGTPDYISPEVLKSQG 219
Query: 608 GWPKIDEKADMYSLGIVFFEL 628
G + D +S+G+ +E+
Sbjct: 220 GDGYYGRECDWWSVGVFLYEM 240
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370 |
| >gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Score = 62.7 bits (152), Expect = 4e-10
Identities = 66/253 (26%), Positives = 107/253 (42%), Gaps = 62/253 (24%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
D++ ++ +G G FG V L ++K + YA+K +L + + R
Sbjct: 44 DYDVVKVIGRGAFGEVQLVRHKSSQKVYAMK--------------LLSKFEMIKRSDSAF 89
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
W E + F +S W + Q++K YLY+ MEY
Sbjct: 90 F------WEERDIMAF-ANSPWVVQLFCAF--------------QDDK----YLYMVMEY 124
Query: 502 CPR-TLRQVFESYDHFDKELAWHLF--RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
P L + +YD +K W F ++V L IH G+IHRD+ P+N+ D +
Sbjct: 125 MPGGDLVNLMSNYDVPEK---WAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHL 181
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI---EQGWPKIDEK 615
K+ DFG +K+++ TG V D VGT Y +PE+ + G +
Sbjct: 182 KLADFGTC--MKMDE----------TGMVRCDTA--VGTPDYISPEVLKSQGGDGYYGRE 227
Query: 616 ADMYSLGIVFFEL 628
D +S+G+ FE+
Sbjct: 228 CDWWSVGVFLFEM 240
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 63.7 bits (155), Expect = 4e-10
Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 40/187 (21%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
+F ++P+ G FG V L + K + + YAVK ++ K+ +N ++ +V
Sbjct: 5 EFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVK---KADMINKNMVHQV---------- 51
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
A+ D ++ S + +S ++A+ +Y+ MEY
Sbjct: 52 ------------QAERDALALSKSPFIVHLYYSLQSAN--------------NVYLVMEY 85
Query: 502 -CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 560
++ + Y +FD+E+A ++ L ++H GIIHRDL P+N+ IK+
Sbjct: 86 LIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKL 145
Query: 561 GDFGLAK 567
DFGL+K
Sbjct: 146 TDFGLSK 152
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 61.1 bits (148), Expect = 8e-10
Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 61/254 (24%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK--DKSLPVNDRILREVATLSRLQ-- 438
+E + +G G +G V ++ G A+K +R++ + LP++ +REVA L RL+
Sbjct: 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLS--TVREVALLKRLEAF 59
Query: 439 -HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
H ++VR L ++R T +E K+ +
Sbjct: 60 DHPNIVR-----------------------LMDVCATSR-------TDRETKVTLVF--- 86
Query: 498 QMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 555
E+ + LR + E L RQ + GL +H I+HRDL P NI +
Sbjct: 87 --EHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG 144
Query: 556 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615
+K+ DFGLA+ Q A P V T +Y APE+
Sbjct: 145 GQVKLADFGLARIYSC----QMALTPV------------VVTLWYRAPEVLLQ-STYATP 187
Query: 616 ADMYSLGIVFFELW 629
DM+S+G +F E++
Sbjct: 188 VDMWSVGCIFAEMF 201
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 61.1 bits (148), Expect = 9e-10
Identities = 56/187 (29%), Positives = 82/187 (43%), Gaps = 23/187 (12%)
Query: 495 LYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 553
L+ MEY L +S FD A +I+ GL +H +GI++RDL +NI D
Sbjct: 71 LFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLD 130
Query: 554 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613
IKI DFG+ K E + DA T GT Y APEI G K +
Sbjct: 131 TDGHIKIADFGMCK----ENMLGDAKTCT-----------FCGTPDYIAPEILLG-QKYN 174
Query: 614 EKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 670
D +S G++ +E+ PF E ++ S ++ P W+ + E + +L +L
Sbjct: 175 TSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQS-IRMDNPCYPRWLTR--EAKDILVKLF 231
Query: 671 SPSPSDR 677
P R
Sbjct: 232 VREPERR 238
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 1e-09
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 27/174 (15%)
Query: 516 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD 575
FD++ A ++ GL + + I++RDL P NI D R I+I D GLA
Sbjct: 99 FDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLA--------- 149
Query: 576 QDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PF 632
P G +V G+VGT Y APE+ K D + LG + +E+ PF
Sbjct: 150 --VQIPE---GETV--RGRVGTVGYMAPEVINN-EKYTFSPDWWGLGCLIYEMIQGQSPF 201
Query: 633 STAME---RQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATE 682
E R+ V +K+ E + KFSE +S+ R L++ +P +R
Sbjct: 202 RKRKERVKREEVDRRVKEDQE---EYSEKFSEDAKSICRMLLTKNPKERLGCRG 252
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 60.7 bits (147), Expect = 1e-09
Identities = 49/154 (31%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586
+IV GL +H +GII+RDL +N+ D IKI DFG+ K E + D T
Sbjct: 104 EIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCK----ENVFGDNRAST---- 155
Query: 587 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLS 643
GT Y APEI QG K D +S G++ +E+ PF E ++ S
Sbjct: 156 -------FCGTPDYIAPEILQGL-KYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFES 207
Query: 644 DLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677
++ P W+ K E + +L +L P+ R
Sbjct: 208 -IRVDTPHYPRWITK--ESKDILEKLFERDPTRR 238
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Score = 60.9 bits (148), Expect = 1e-09
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586
+I GL +H +GII+RDL +N+ DA IKI DFG+ K + F T
Sbjct: 109 EIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCK---------ENIFGGKTTR 159
Query: 587 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLS 643
GT Y APEI P + D ++ G++ +E+ PF E ++ S
Sbjct: 160 TF------CGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQS 212
Query: 644 DLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677
++ P S ++K E S+ + L++ P+ R
Sbjct: 213 IMEHNVSYPKS-LSK--EAVSICKGLLTKHPAKR 243
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 1e-09
Identities = 80/327 (24%), Positives = 133/327 (40%), Gaps = 76/327 (23%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
+DFE + LG G G V ++K G A K I L+ K + ++I+RE+ L
Sbjct: 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKP-AIRNQIIRELQVLHECNSP 63
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
++V +Y A++ G + M G
Sbjct: 64 YIVGFYGAFYSDGEISICMEHMDGG----------------------------------- 88
Query: 501 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARNDIK 559
+L QV + +E+ + ++ GLA++ + I+HRD+ P+NI ++R +IK
Sbjct: 89 ----SLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIK 144
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ--VGTYFYTAPEIEQGWPKIDEKAD 617
+ DFG++ G +D VGT Y +PE QG ++D
Sbjct: 145 LCDFGVS-------------------GQLIDSMANSFVGTRSYMSPERLQG-THYSVQSD 184
Query: 618 MYSLGIVFFELWHPFSTAMER-QIVLSDLKQKGEL--PPSWVAKFSEQESLLRRLMSPSP 674
++S+G+ EL A+ R I D K+ + P + E S+ R P P
Sbjct: 185 IWSMGLSLVEL------AIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPR---PRP 235
Query: 675 SDRPSATELLQDALPPQMEYELLDNIL 701
RP + + D+ P +ELLD I+
Sbjct: 236 PGRPVSGHGM-DSRPAMAIFELLDYIV 261
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 60.1 bits (145), Expect = 2e-09
Identities = 70/324 (21%), Positives = 130/324 (40%), Gaps = 84/324 (25%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKK---IRLKDKSLPVNDRILREVATLSRL-Q 438
FE ++ +G+G +G V GRH + I++ D + + I +E+ L +
Sbjct: 8 FELVELVGNGTYGQV------YKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSH 61
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
H+++ YY A+ + D D +W +
Sbjct: 62 HRNIATYYGAFIKKNPPGMD-DQLW---------------------------------LV 87
Query: 499 MEYC-PRTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 555
ME+C ++ + ++ + +E ++ R+I+ GL+H+H +IHRD+ N+
Sbjct: 88 MEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTEN 147
Query: 556 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----EQGWPK 611
++K+ DFG++ QLD+ +GT ++ APE+ E
Sbjct: 148 AEVKLVDFGVSA-----QLDRTVGRRNTF----------IGTPYWMAPEVIACDENPDAT 192
Query: 612 IDEKADMYSLGIVFFEL---------WHPFSTAMERQIVLSDLKQKGEL-PPSWVAKFSE 661
D K+D++SLGI E+ HP R + L L W KF
Sbjct: 193 YDFKSDLWSLGITAIEMAEGAPPLCDMHPM-----RALFLIPRNPAPRLKSKKWSKKF-- 245
Query: 662 QESLLRRLMSPSPSDRPSATELLQ 685
+S + + + S RP+ +L++
Sbjct: 246 -QSFIESCLVKNHSQRPTTEQLMK 268
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Score = 61.0 bits (148), Expect = 2e-09
Identities = 80/336 (23%), Positives = 129/336 (38%), Gaps = 90/336 (26%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRH-YAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
F +++ +G G FG V L + K+D YA+K +R D L R Q H
Sbjct: 3 FVKIKTIGIGAFGEVCLVR-KVDTNALYAMKTLRKAD--------------VLMRNQAAH 47
Query: 442 VVRYYQAWFETGVADFD----GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
V A+ D D+ W S F + ++N LY
Sbjct: 48 VK-----------AERDILAEADNEWVVKLYYS--FQD----------KDN------LYF 78
Query: 498 QMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 556
M+Y P + + F+++LA ++ + +H G IHRD+ P+NI D
Sbjct: 79 VMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG 138
Query: 557 DIKIGDFGLAK----------FLKLEQLDQDAAFPTDTGG---------VSVDGTGQ--- 594
IK+ DFGL + K + QD+ P++ + Q
Sbjct: 139 HIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQR 198
Query: 595 ------VGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFELW---HPF--STAMERQIV 641
VGT Y APE+ G+ ++ D +S+G++ +E+ PF T E Q+
Sbjct: 199 CLAHSLVGTPNYIAPEVLLRTGYTQL---CDWWSVGVILYEMLVGQPPFLADTPAETQLK 255
Query: 642 LSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677
+ + + +P AK S + S L + DR
Sbjct: 256 VINWETTLHIPSQ--AKLSREASDLILRLCCGAEDR 289
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 59.4 bits (144), Expect = 2e-09
Identities = 68/311 (21%), Positives = 117/311 (37%), Gaps = 79/311 (25%)
Query: 386 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRY 445
L+ LG G FG V L K + A+K IR + ++ +D I E + +L H ++V+
Sbjct: 9 LKELGSGQFGVVHLGKWR-GKIDVAIKMIR--EGAMSEDDFI-EEAKVMMKLSHPNLVQL 64
Query: 446 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY---- 501
Y GV + ++I EY
Sbjct: 65 Y------GVC----------------------------------TKQRPIFIVTEYMANG 84
Query: 502 CPRT-LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 560
C LR+ E + + E + ++ G IHRDL N N +K+
Sbjct: 85 CLLNYLRERKGK---LGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKV 141
Query: 561 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF---YTAPEIEQGWPKIDEKAD 617
DFGLA+++ LD T GT F + PE+ + + K+D
Sbjct: 142 SDFGLARYV----LDDQY-------------TSSQGTKFPVKWAPPEVFD-YSRFSSKSD 183
Query: 618 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 673
++S G++ +E++ P+ + V+ + L +A +E +++
Sbjct: 184 VWSFGVLMWEVFSEGKMPYERFSNSE-VVESVSAGYRLYRPKLAP-TEVYTIMYSCWHEK 241
Query: 674 PSDRPSATELL 684
P DRP+ +LL
Sbjct: 242 PEDRPAFKKLL 252
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 59.6 bits (144), Expect = 3e-09
Identities = 70/322 (21%), Positives = 122/322 (37%), Gaps = 90/322 (27%)
Query: 383 FEELQPLGHGGFGHVVLCKN-KLDGRHYAVKKIRLK--DKSLPVNDRILREVATLSRLQ- 438
+E + +G G +G V ++ K GR A+K++R++ ++ +P++ +REVA L L+
Sbjct: 3 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLS--TIREVAVLRHLET 60
Query: 439 --HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 496
H +VVR + DV T L
Sbjct: 61 FEHPNVVRLF-----------------------------------DVCTVSRTDRETKLT 85
Query: 497 IQMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 554
+ E+ + L + E + Q++ GL +H ++HRDL P NI +
Sbjct: 86 LVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS 145
Query: 555 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKI 612
IK+ DFGLA+ + T V T +Y APE+ + +
Sbjct: 146 SGQIKLADFGLARIYSFQMAL----------------TSVVVTLWYRAPEVLLQSSYAT- 188
Query: 613 DEKADMYSLGIVFFELWHPFSTAMERQIVL---SDLKQKGELPPSWVAKFSEQESLLRRL 669
D++S+G +F E++ R+ + SD+ Q G++ L +
Sbjct: 189 --PVDLWSVGCIFAEMF-------RRKPLFRGSSDVDQLGKI--------------LDVI 225
Query: 670 MSPSPSDRPSATELLQDALPPQ 691
P D P L + A +
Sbjct: 226 GLPGEEDWPRDVALPRQAFHSK 247
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 59.6 bits (144), Expect = 3e-09
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 15/102 (14%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586
Q++ GLA+IHGQ I+HRDL P N+ ++K+ DFGLA+ + P+ T
Sbjct: 111 QLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLAR---------AKSIPSQT-- 159
Query: 587 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 628
+ +V T +Y P++ G D++ G +F E+
Sbjct: 160 ----YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEM 197
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Score = 60.0 bits (145), Expect = 3e-09
Identities = 61/253 (24%), Positives = 104/253 (41%), Gaps = 62/253 (24%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
D+E ++ +G G FG V L ++K + YA+K +L + + R
Sbjct: 44 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMK--------------LLSKFEMIKRSDSAF 89
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
W E + F +S W + ++ + + YLY+ MEY
Sbjct: 90 F------WEERDIMAF-ANSPW----VVQLFYAFQ--------------DDRYLYMVMEY 124
Query: 502 CPR-TLRQVFESYDHFDKELAWHLF--RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
P L + +YD +K W F ++V L IH G IHRD+ P+N+ D +
Sbjct: 125 MPGGDLVNLMSNYDVPEK---WARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHL 181
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI---EQGWPKIDEK 615
K+ DFG +++++ DT VGT Y +PE+ + G +
Sbjct: 182 KLADFGTCM-----KMNKEGMVRCDTA---------VGTPDYISPEVLKSQGGDGYYGRE 227
Query: 616 ADMYSLGIVFFEL 628
D +S+G+ +E+
Sbjct: 228 CDWWSVGVFLYEM 240
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 3e-09
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 30/171 (17%)
Query: 526 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTG 585
+Q +E L ++H IIHRDL NI F DIK+ DFG++ + + +F
Sbjct: 110 KQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSA-KNTRTIQRRDSF----- 163
Query: 586 GVSVDGTGQVGTYFYTAPEI-----EQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQI 640
+GT ++ APE+ + P D KAD++SLGI E+ E
Sbjct: 164 ---------IGTPYWMAPEVVMCETSKDRP-YDYKADVWSLGITLIEMAQIEPPHHELNP 213
Query: 641 VLSDLKQKGELPPS------WVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685
+ LK PP+ W ++F + L++ + + R + T+LLQ
Sbjct: 214 MRVLLKIAKSEPPTLAQPSRWSSEFKD---FLKKCLEKNVDARWTTTQLLQ 261
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 60.0 bits (145), Expect = 4e-09
Identities = 54/184 (29%), Positives = 74/184 (40%), Gaps = 33/184 (17%)
Query: 526 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTG 585
R ++ + ++H IIHRD+ NIF + D+ +GDFG A FP D
Sbjct: 189 RSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGA------------ACFPVDIN 236
Query: 586 GVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAME-------- 637
G GT APE+ P D++S GIV FE+ + E
Sbjct: 237 ANKY--YGWAGTIATNAPELLARDP-YGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDC 293
Query: 638 ---RQIVLSDLKQKG----ELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690
RQI L +++ G E P A E L + S P RP T L + LP
Sbjct: 294 DSDRQIKLI-IRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYE--LPI 350
Query: 691 QMEY 694
+EY
Sbjct: 351 DLEY 354
|
Length = 391 |
| >gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 60.3 bits (146), Expect = 4e-09
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 14/102 (13%)
Query: 526 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTG 585
RQ++ + +IHG+GIIHRD+ N+ + DI +GDFG A F + F
Sbjct: 267 RQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFA---RGSWSTPFH---- 319
Query: 586 GVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFE 627
G GT APE+ G P D++S G+V FE
Sbjct: 320 ------YGIAGTVDTNAPEVLAGDP-YTPSVDIWSAGLVIFE 354
|
Length = 461 |
| >gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Score = 59.7 bits (144), Expect = 5e-09
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 21/143 (14%)
Query: 491 ESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLT 546
++ +L + ME+ P+T+ + + Y + L L + Q+ LA+IH + I HRDL
Sbjct: 138 KNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLK 197
Query: 547 PNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 605
P N+ D + +K+ DFG AK L G SV + + FY APE+
Sbjct: 198 PQNLLIDPNTHTLKLCDFGSAKNLL-------------AGQRSVS---YICSRFYRAPEL 241
Query: 606 EQGWPKIDEKADMYSLGIVFFEL 628
G D++SLG + E+
Sbjct: 242 MLGATNYTTHIDLWSLGCIIAEM 264
|
Length = 440 |
| >gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 6e-09
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 23/158 (14%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586
+IV L H+H GII+RD+ NI D+ + + DFGL+K +++++ +F
Sbjct: 113 EIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSF------ 166
Query: 587 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKA-DMYSLGIVFFELW---HPFSTAMER--QI 640
GT Y AP+I +G +KA D +S+G++ +EL PF+ E+ Q
Sbjct: 167 --------CGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQA 218
Query: 641 VLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDR 677
+S K E P P ++ + + +++RL+ P R
Sbjct: 219 EISRRILKSEPPYPQEMSALA--KDIIQRLLMKDPKKR 254
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290 |
| >gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 6e-09
Identities = 62/254 (24%), Positives = 100/254 (39%), Gaps = 70/254 (27%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 448
+G G FG V+L K KLDG+ YAVK +L++ L+R + +H+
Sbjct: 3 IGKGSFGKVLLAKRKLDGKCYAVK--------------VLQKKIVLNRKEQKHI------ 42
Query: 449 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLEST-YLYIQMEYCPRTLR 507
+A + + G ++T LY +++
Sbjct: 43 -------------------MAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGG-- 81
Query: 508 QVFESYDHFDKELAWHLFR------QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 561
E + H +E ++ R +I L ++H I++RDL P NI D++ + +
Sbjct: 82 ---ELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLT 138
Query: 562 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621
DFGL K + Q D F GT Y APE+ + P D D + L
Sbjct: 139 DFGLCK-EGIAQSDTTTTF--------------CGTPEYLAPEVIRKQP-YDNTVDWWCL 182
Query: 622 GIVFFELWH---PF 632
G V +E+ + PF
Sbjct: 183 GAVLYEMLYGLPPF 196
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 58.4 bits (141), Expect = 6e-09
Identities = 63/250 (25%), Positives = 107/250 (42%), Gaps = 54/250 (21%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDG----RHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 438
+ ++ LG G FG V LC+ +G AVK ++ + + D + +E+ L L
Sbjct: 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIAD-LKKEIEILRNLY 64
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
H+++V+Y G+ DG G+G F L S L
Sbjct: 65 HENIVKY------KGICTEDG----GNGIKLIMEF----------------LPSGSL--- 95
Query: 499 MEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
EY PR ++ + ++L + + QI +G+ ++ + +HRDL N+ ++ + +
Sbjct: 96 KEYLPRNKNKI-----NLKQQLKYAV--QICKGMDYLGSRQYVHRDLAARNVLVESEHQV 148
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618
KIGDFGL K A TD +V ++Y APE K +D+
Sbjct: 149 KIGDFGLTK-----------AIETDKEYYTVKDDLDSPVFWY-APECLIQ-SKFYIASDV 195
Query: 619 YSLGIVFFEL 628
+S G+ +EL
Sbjct: 196 WSFGVTLYEL 205
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 8e-09
Identities = 80/336 (23%), Positives = 129/336 (38%), Gaps = 86/336 (25%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN-DRILREVATLSRLQHQH 441
F +++ LG G FG V L + YA+K +R KD L + E L+ ++
Sbjct: 3 FVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEW 62
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
VVR Y + F+ D D+ LY M+Y
Sbjct: 63 VVRLYYS-FQ------DKDN---------------------------------LYFVMDY 82
Query: 502 CPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 560
P + + F ++LA ++ + +H G IHRD+ P+NI D IK+
Sbjct: 83 IPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKL 142
Query: 561 GDFGLAKFLKL----------EQLDQDAA-FPTDTGGVSVDGTGQ--------------- 594
DFGL + + + QD+ F + G + G
Sbjct: 143 TDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQR 202
Query: 595 ------VGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPF--STAMERQIV 641
VGT Y APE+ G+ ++ D +S+G++ +E+ PF T +E Q+
Sbjct: 203 CLAHSLVGTPNYIAPEVLLRTGYTQL---CDWWSVGVILYEMLVGQPPFLAQTPLETQMK 259
Query: 642 LSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677
+ + + +PP AK S + S L + P DR
Sbjct: 260 VINWQTSLHIPPQ--AKLSPEASDLIIKLCRGPEDR 293
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 8e-09
Identities = 56/257 (21%), Positives = 107/257 (41%), Gaps = 66/257 (25%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKK---IRLKDKSLPVNDRILREVATLSRL-Q 438
FE ++ +G+G +G V GRH + I++ D + + I E+ L +
Sbjct: 18 FELVEVVGNGTYGQV------YKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSH 71
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
H+++ YY A+ + D D +W +
Sbjct: 72 HRNIATYYGAFIKKSPPGHD-DQLW---------------------------------LV 97
Query: 499 MEYC-PRTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 555
ME+C ++ + ++ + ++ ++ R+I+ GLAH+H +IHRD+ N+
Sbjct: 98 MEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTEN 157
Query: 556 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----EQGWPK 611
++K+ DFG++ QLD+ +GT ++ APE+ E
Sbjct: 158 AEVKLVDFGVSA-----QLDRTVGRRNTF----------IGTPYWMAPEVIACDENPDAT 202
Query: 612 IDEKADMYSLGIVFFEL 628
D ++D++SLGI E+
Sbjct: 203 YDYRSDIWSLGITAIEM 219
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 9e-09
Identities = 76/325 (23%), Positives = 131/325 (40%), Gaps = 74/325 (22%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
+DFE++ LG G G V +K G A K I L+ K + ++I+RE+ L
Sbjct: 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKP-AIRNQIIRELQVLHECNSP 63
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
++V +Y A++ G + M G
Sbjct: 64 YIVGFYGAFYSDGEISICMEHMDGG----------------------------------- 88
Query: 501 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARNDIK 559
+L QV + +++ + +++GL ++ + I+HRD+ P+NI ++R +IK
Sbjct: 89 ----SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 144
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ--VGTYFYTAPEIEQGWPKIDEKAD 617
+ DFG++ G +D VGT Y +PE QG ++D
Sbjct: 145 LCDFGVS-------------------GQLIDSMANSFVGTRSYMSPERLQG-THYSVQSD 184
Query: 618 MYSLGIVFFELWHPFSTAMER-QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 676
++S+G+ E+ A+ R I D K+ + V + R P P
Sbjct: 185 IWSMGLSLVEM------AIGRYPIPPPDAKELELMFGCPVEGDPAESETSPR---PRPPG 235
Query: 677 RPSATELLQDALPPQMEYELLDNIL 701
RP ++ D+ PP +ELLD I+
Sbjct: 236 RPLSS-YGPDSRPPMAIFELLDYIV 259
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 1e-08
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 22/165 (13%)
Query: 516 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD 575
FD+ + ++ L +H G+I+RDL +NI DA K+ DFG+ K E +
Sbjct: 93 FDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCK----EGIL 148
Query: 576 QDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PF 632
T GT Y APEI Q D ++LG++ +E+ PF
Sbjct: 149 NGVTTTT-----------FCGTPDYIAPEILQELE-YGPSVDWWALGVLMYEMMAGQPPF 196
Query: 633 STAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677
E + S L L P W++K E S+L+ M+ +P+ R
Sbjct: 197 EADNEDDLFESILHDD-VLYPVWLSK--EAVSILKAFMTKNPNKR 238
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 57.6 bits (139), Expect = 1e-08
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 27/166 (16%)
Query: 528 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGV 587
+V+GL ++ I+HRD+ P+N+ + R +K+ DFG++ L V
Sbjct: 104 VVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQL-----------------V 146
Query: 588 SVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSD 644
+ VGT Y APE G + +D++SLGI F EL P+ + Q L
Sbjct: 147 NSIAKTYVGTNAYMAPERISG-EQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMP 205
Query: 645 LKQ----KGELPPSW-VAKFSEQ-ESLLRRLMSPSPSDRPSATELL 684
L+ E PP V +FSE+ + + M P +RP+ L+
Sbjct: 206 LQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLM 251
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 57.2 bits (138), Expect = 1e-08
Identities = 52/250 (20%), Positives = 99/250 (39%), Gaps = 66/250 (26%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+ + +G G G V + G+ A+K++ L+ + P + I+ E+ + +H ++
Sbjct: 21 YTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKHPNI 78
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
V Y ++ GD +W + MEY
Sbjct: 79 VNYLDSYLV-------GDELW---------------------------------VVMEYL 98
Query: 503 PR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 561
+L V + ++A + R+ ++ L +H +IHRD+ +NI +K+
Sbjct: 99 AGGSLTDVVTETCMDEGQIA-AVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLT 157
Query: 562 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI---EQGWPKIDEKADM 618
DFG + EQ + + VGT ++ APE+ + PK+ D+
Sbjct: 158 DFGFCAQITPEQSKR---------------STMVGTPYWMAPEVVTRKAYGPKV----DI 198
Query: 619 YSLGIVFFEL 628
+SLGI+ E+
Sbjct: 199 WSLGIMAIEM 208
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 57.2 bits (138), Expect = 2e-08
Identities = 75/308 (24%), Positives = 121/308 (39%), Gaps = 75/308 (24%)
Query: 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--------RILREVATLSRLQ 438
+ LG G FG V+L + K GR YAVK ++ KD L +D RIL +L+R
Sbjct: 1 RVLGKGSFGKVMLARLKESGRLYAVKVLK-KDVILQDDDVECTMTEKRIL----SLAR-N 54
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
H + + Y F+T F F + D L
Sbjct: 55 HPFLTQLYCC-FQTPDRLF---------------FVMEFVNGGD------------LMFH 86
Query: 499 MEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
++ R FD+ A +I L +H +GII+RDL +N+ D
Sbjct: 87 IQKSRR-----------FDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHC 135
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618
K+ DFG+ K E + T GT Y APEI Q D
Sbjct: 136 KLADFGMCK----EGIFNGKTTST-----------FCGTPDYIAPEILQEM-LYGPSVDW 179
Query: 619 YSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 675
+++G++ +E+ PF E + + L + + P+W+++ + +L+ M+ +P+
Sbjct: 180 WAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE-VVYPTWLSQ--DAVDILKAFMTKNPT 236
Query: 676 DRPSATEL 683
R + L
Sbjct: 237 MRLGSLTL 244
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|214735 smart00591, RWD, domain in RING finger and WD repeat containing proteins and DEXDc-like helicases subfamily related to the UBCc domain | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 2e-08
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 42 CLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAAQEFLSE 101
YP + P + + +GL+ LL L++ A N G VMIF LVE QEFLSE
Sbjct: 49 LPENYPDEAPPISLLNSEGLSDEQLAELLKKLEEIAEEN--LGEVMIFELVEKLQEFLSE 106
Query: 102 I 102
Sbjct: 107 F 107
|
Length = 107 |
| >gnl|CDD|218742 pfam05773, RWD, RWD domain | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 2e-08
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 44 PGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAAQEFL 99
YP + PK+ ++ L D LL L++ A N G VMIF L+E QE L
Sbjct: 60 EDYPDEPPKISLSSPWLLRDQDKLQLLKELEELAEENL--GEVMIFELIEWLQENL 113
|
This domain was identified in WD40 repeat proteins and Ring finger domain proteins. The function of this domain is unknown. GCN2 is the alpha-subunit of the only translation initiation factor (eIF2 alpha) kinase that appears in all eukaryotes. Its function requires an interaction with GCN1 via the domain at its N-terminus, which is termed the RWD domain after three major RWD-containing proteins: RING finger-containing proteins, WD-repeat-containing proteins, and yeast DEAD (DEXD)-like helicases. The structure forms an alpha + beta sandwich fold consisting of two layers: a four-stranded antiparallel beta-sheet, and three side-by-side alpha-helices. Length = 113 |
| >gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Score = 56.9 bits (137), Expect = 2e-08
Identities = 62/269 (23%), Positives = 105/269 (39%), Gaps = 56/269 (20%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 448
+G G FG V+L ++K + + YAVK +L++ A L + + +H++
Sbjct: 3 IGKGSFGKVLLARHKAEEKFYAVK--------------VLQKKAILKKKEEKHIMSERNV 48
Query: 449 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQ 508
+ F L FS + A + ++Q E C R
Sbjct: 49 LLKNVKHPF----------LVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRA 98
Query: 509 VFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 568
F + +I L ++H I++RDL P NI D++ I + DFGL K
Sbjct: 99 RFYA-------------AEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCK- 144
Query: 569 LKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 628
E ++ + T GT Y APE+ P D D + LG V +E+
Sbjct: 145 ---ENIEHNGTTST-----------FCGTPEYLAPEVLHKQP-YDRTVDWWCLGAVLYEM 189
Query: 629 WH---PFSTAMERQIVLSDLKQKGELPPS 654
+ PF + ++ + L + +L P+
Sbjct: 190 LYGLPPFYSRNTAEMYDNILNKPLQLKPN 218
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325 |
| >gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 3e-08
Identities = 65/361 (18%), Positives = 118/361 (32%), Gaps = 101/361 (27%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 448
H+ K AVKKI L S + +E+ T +LQH +++ Y +
Sbjct: 10 FEDLMIVHLAKHKP--TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTS 67
Query: 449 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY-----CP 503
+ + + LY+ C
Sbjct: 68 F----------------------------------------IVDSELYVVSPLMAYGSCE 87
Query: 504 RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDF 563
L+ F + + + + ++ L +IH +G IHR + ++I + +
Sbjct: 88 DLLKTHFP--EGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLS-- 143
Query: 564 GLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI-EQGWPKIDEKADMYSLG 622
GL + + + + D V + +PE+ +Q +EK+D+YS+G
Sbjct: 144 GLRYSVSMIKHGKRQRVVHDF------PKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVG 197
Query: 623 IVFFELWH---PFS----TAMERQIV----------------LSDLKQKGE--------- 650
I EL + PF T M + V + Q
Sbjct: 198 ITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRD 257
Query: 651 -LPPSWVAKFSEQ-----ESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRMM 704
+ + FSE E L+R P RPSA++LL + Q + ++L ++
Sbjct: 258 SVDHPYTRTFSEHFHQFVELCLQR----DPESRPSASQLLNHSFFKQCK-RRNTSLLDLL 312
Query: 705 H 705
Sbjct: 313 K 313
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 55.8 bits (135), Expect = 3e-08
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 21/105 (20%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPTDT 584
QI EG+A++ + IHRDL NI KI DFGLA+ ++ ++ + A FP
Sbjct: 111 QIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIK- 169
Query: 585 GGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFEL 628
+TAPE G + K+D++S GI+ E+
Sbjct: 170 ---------------WTAPEAANYG--RFTIKSDVWSFGILLTEI 197
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 56.2 bits (135), Expect = 3e-08
Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 30/228 (13%)
Query: 506 LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGL 565
L V E D+ +L + QI +G+ ++ + ++HRDL N+ + N +KI DFGL
Sbjct: 96 LDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGL 155
Query: 566 AKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVF 625
A+ L+ ++ + +A D G + + + A E + K ++D++S G+
Sbjct: 156 ARLLEGDEKEYNA----DGGKMPIK---------WMALECIH-YRKFTHQSDVWSYGVTI 201
Query: 626 FELW----HPFSTAMERQIVLSDLKQKGE-LPPSWVAKFSEQESLLRRLMSPSPSDRPSA 680
+EL P+ R+I DL +KGE LP + +++ M + S RP
Sbjct: 202 WELMTFGGKPYDGIPTREI--PDLLEKGERLPQPPICTIDVYMVMVKCWMIDADS-RPKF 258
Query: 681 TELLQD----ALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEE 724
EL + A PQ Y ++ RM S + S K ++ DEE
Sbjct: 259 KELAAEFSRMARDPQ-RYLVIQGDDRMKLPSPNDS---KFFQNLLDEE 302
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Score = 56.6 bits (136), Expect = 3e-08
Identities = 75/306 (24%), Positives = 124/306 (40%), Gaps = 76/306 (24%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
DFE L+ +G G FG V + K K + +A+K + + +L+ T + +
Sbjct: 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWE--------MLKRAETACFREERD 53
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
V+ +GD+ W T F + LY+ M+Y
Sbjct: 54 VL-------------VNGDNQWI--TTLHYAFQ----------------DENNLYLVMDY 82
Query: 502 CP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
TL FE D +++A ++V + +H +HRD+ P+NI D
Sbjct: 83 YVGGDLLTLLSKFE--DRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGH 140
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ----VGTYFYTAPEI----EQGW 609
I++ DFG LKL + DGT Q VGT Y +PEI E G
Sbjct: 141 IRLADFG--SCLKLME----------------DGTVQSSVAVGTPDYISPEILQAMEDGK 182
Query: 610 PKIDEKADMYSLGIVFFELWH---PF--STAMERQIVLSDLKQKGELPPSWVAKFSEQES 664
K + D +SLG+ +E+ + PF + +E + + K++ + P + +
Sbjct: 183 GKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKD 242
Query: 665 LLRRLM 670
L+RRL+
Sbjct: 243 LIRRLI 248
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 5e-08
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586
Q+ EG+A++ Q IHRDL NI K+ DFGLA+ +K + + +
Sbjct: 112 QVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIK------EDVYLSSDKK 165
Query: 587 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 628
+ Y +TAPE K+D++S GI+ +E+
Sbjct: 166 IP---------YKWTAPE-AASHGTFSTKSDVWSFGILLYEM 197
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Score = 56.2 bits (135), Expect = 5e-08
Identities = 76/311 (24%), Positives = 116/311 (37%), Gaps = 82/311 (26%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
F +++ LG G FG V L YA+K +R KD L+R Q HV
Sbjct: 3 FVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKD--------------VLNRNQVAHV 48
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
E D+ W S F ++ LY M+Y
Sbjct: 49 KAERDILAE-------ADNEWVVKLYYS--FQDKDN----------------LYFVMDYI 83
Query: 503 PR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 561
P + + + F + LA ++ + +H G IHRD+ P+NI D IK+
Sbjct: 84 PGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLT 143
Query: 562 DFGLAK----------FLKLEQLDQDAAFPTDT-GGVSVDGTGQ---------------- 594
DFGL + K + QD+ P+D VS G
Sbjct: 144 DFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRC 203
Query: 595 -----VGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFELW---HPF--STAMERQIVL 642
VGT Y APE+ +G+ ++ D +S+G++ FE+ PF T E Q+ +
Sbjct: 204 LAHSLVGTPNYIAPEVLLRKGYTQL---CDWWSVGVILFEMLVGQPPFLAPTPTETQLKV 260
Query: 643 SDLKQKGELPP 653
+ + +PP
Sbjct: 261 INWENTLHIPP 271
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 7e-08
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 21/105 (20%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586
Q+ G+A++ Q IHRDL N+ N K+ DFGLA+ +K +
Sbjct: 111 QVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKED-------------- 156
Query: 587 VSVDGTGQVGTYF---YTAPEIEQGWPKIDEKADMYSLGIVFFEL 628
+ G F +TAPE + + K+D++S GI+ E+
Sbjct: 157 ---IYEAREGAKFPIKWTAPEAAL-YNRFSIKSDVWSFGILLTEI 197
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 54.9 bits (132), Expect = 8e-08
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 16/134 (11%)
Query: 524 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTD 583
+ R I G+ ++ +HRDL NI ++ K+ DFGL++F L+ D + PT
Sbjct: 111 MLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRF-----LEDDTSDPTY 165
Query: 584 TGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 639
T + G++ +TAPE + K +D++S GIV +E+ P+ M Q
Sbjct: 166 TSSLG----GKIPIR-WTAPEAIA-YRKFTSASDVWSYGIVMWEVMSYGERPYWD-MSNQ 218
Query: 640 IVLSDLKQKGELPP 653
V++ ++Q LPP
Sbjct: 219 DVINAIEQDYRLPP 232
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|222097 pfam13393, tRNA-synt_His, Histidyl-tRNA synthetase | Back alignment and domain information |
|---|
Score = 55.3 bits (134), Expect = 8e-08
Identities = 53/227 (23%), Positives = 80/227 (35%), Gaps = 43/227 (18%)
Query: 832 SVYR-RAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIH----- 885
V R R G LQ ++IG A +AEV+ + ++ + ES +
Sbjct: 96 PVLRTRPDGLGGSREPLQIGAELIGHAGIEADAEVISLLLEAL------ESLGVKGVTLD 149
Query: 886 LNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAE 945
L H ++ A+ G+ E + + L K + +LL EL L
Sbjct: 150 LGHVGIVRALLEALGLSEAQEEALRDALQ-------------RKDLPELEELLAELGLDP 196
Query: 946 AVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDEL-----YLRIWRIEKNIYID 1000
A+ + L + G + L LP P ALDEL L + +D
Sbjct: 197 ALADALLAL-PELYGDPE-VLDEALELLP-GSPAAAALDELEALAALLEALGPGVRLTLD 253
Query: 1001 -ALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHR 1046
A + E Y+ L F ++ L A GGRYD L
Sbjct: 254 LAELRGYE-YYTGLVFAAYA--PGAGQAL------ARGGRYDNLGEV 291
|
This is a family of class II aminoacyl-tRNA synthetase-like and ATP phosphoribosyltransferase regulatory subunits. Length = 308 |
| >gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 9e-08
Identities = 77/326 (23%), Positives = 122/326 (37%), Gaps = 96/326 (29%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-------KSLPVNDRILREVATLS 435
F L LG G FG V+L + K G YA+K ++ D +SL RI T +
Sbjct: 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFE---TAN 57
Query: 436 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 495
+H +V + A F+T ++
Sbjct: 58 SERHPFLVNLF-ACFQT---------------------------------------EDHV 77
Query: 496 YIQMEYCP--RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 553
MEY + + D F + A +V GL ++H I++RDL +N+ D
Sbjct: 78 CFVMEYAAGGDLMMHIHT--DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLD 135
Query: 554 ARNDIKIGDFGLAKFLKLEQL---DQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQG 608
+KI DFGL K E + D+ + F GT + APE+ E
Sbjct: 136 TEGFVKIADFGLCK----EGMGFGDRTSTF--------------CGTPEFLAPEVLTETS 177
Query: 609 WPKIDEKADMYSLGIVFFELW---HPFSTAMERQ----IVLSDLKQKGELPPSWVAKFSE 661
+ D + LG++ +E+ PF E + IV +++ L E
Sbjct: 178 Y---TRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS-------RE 227
Query: 662 QESLLRRLMSPSPSDRPSATELLQDA 687
S++RRL+ +P R + E +DA
Sbjct: 228 AISIMRRLLRRNPERRLGSGE--KDA 251
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324 |
| >gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Score = 55.1 bits (132), Expect = 9e-08
Identities = 60/254 (23%), Positives = 101/254 (39%), Gaps = 67/254 (26%)
Query: 389 LGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 446
+G G +GHV K K D R YA+K+I S+ RE+A L L+H +V+
Sbjct: 9 VGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSA----CREIALLRELKHPNVISLQ 64
Query: 447 QAWFETG------VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
+ + + D+ +W ++ +N+ +Q+
Sbjct: 65 KVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKP------------------VQL- 105
Query: 501 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF----DARN 556
PR + + L QI++G+ ++H ++HRDL P NI R
Sbjct: 106 --PRGMVK--------------SLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERG 149
Query: 557 DIKIGDFGLAKFLK--LEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614
+KI D G A+ L+ L D V T++Y APE+ G +
Sbjct: 150 RVKIADMGFARLFNSPLKPL--------------ADLDPVVVTFWYRAPELLLGARHYTK 195
Query: 615 KADMYSLGIVFFEL 628
D++++G +F EL
Sbjct: 196 AIDIWAIGCIFAEL 209
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 54.6 bits (131), Expect = 1e-07
Identities = 55/190 (28%), Positives = 76/190 (40%), Gaps = 42/190 (22%)
Query: 389 LGHGGFGHVVL--CKN---KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVV 443
LG G FG V L C N D AVK LKD +L RE L+ LQH+H+V
Sbjct: 13 LGEGAFGKVFLAECYNLSPTKDKMLVAVKA--LKDPTLAARKDFQREAELLTNLQHEHIV 70
Query: 444 RYYQAWFETGVADFDGDSM------WGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
++Y GV DGD + G L ++ + V GQ + +
Sbjct: 71 KFY------GVC-GDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLS 123
Query: 498 QMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
QM H+ QI G+ ++ Q +HRDL N A
Sbjct: 124 QM----------------------LHIASQIASGMVYLASQHFVHRDLATRNCLVGANLL 161
Query: 558 IKIGDFGLAK 567
+KIGDFG+++
Sbjct: 162 VKIGDFGMSR 171
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|237043 PRK12292, hisZ, ATP phosphoribosyltransferase regulatory subunit; Provisional | Back alignment and domain information |
|---|
Score = 55.3 bits (134), Expect = 1e-07
Identities = 69/331 (20%), Positives = 119/331 (35%), Gaps = 77/331 (23%)
Query: 832 SVYR-RAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHL--NH 888
+V+R + G +LQ ++IG A +AEV+ + ++ + + L H
Sbjct: 106 NVFRAQERGLGRSREFLQSGVELIGDAGLEADAEVILLLLEALK---ALGLPNFTLDLGH 162
Query: 889 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVV 948
L A+ AG+ E E + LA +K V +L+ +L+E +
Sbjct: 163 VGLFRALLEAAGLSEELEEVLRRALA-------------NKDYVALEELVL--DLSEELR 207
Query: 949 NRLQTVGLRFCGAADQALPRLRG---------ALPADKPTRKALDELYLRIWRI------ 993
+ L ALPRLRG L P ++ALDEL +
Sbjct: 208 DALL------------ALPRLRGGREVLEEARKLLPSLPIKRALDELE-ALAEALEKYGY 254
Query: 994 EKNIYID-ALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREY 1052
+ +D L+ + Y+ + F+ + G +A GGRYD LL + R
Sbjct: 255 GIPLSLDLGLLRHL-DYYTGIVFEGY--------VDGVGNPIASGGRYDDLL-GRFGR-- 302
Query: 1053 VGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVA 1112
G SL L+ +++ R + V+ L +
Sbjct: 303 --------ARPATGFSLDLDRLLELQLELPVEARKDL---VIAPDSEA---LAAALAAAQ 348
Query: 1113 ELWEENIKAQFVPVPDPSLTEQYEYASEHDI 1143
EL ++ + +P + + EYA + I
Sbjct: 349 ELRKKGEIVV-LALPGRNFEDAREYARDRQI 378
|
Length = 391 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 53.7 bits (129), Expect = 2e-07
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586
QI + ++ + IHRDL N + +K+ DFGL++ + +
Sbjct: 112 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------------ 159
Query: 587 VSVDGTGQVGTYF---YTAPEIEQGWPKIDEKADMYSLGIVFFEL----WHPFSTAMERQ 639
T G F +TAPE + K K+D+++ G++ +E+ P+ ++
Sbjct: 160 -----TAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDLS 212
Query: 640 IVLSDLKQ--KGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685
V L++ + E P K E L+R +PSDRPS E+ Q
Sbjct: 213 QVYELLEKGYRMERPEGCPPKVYE---LMRACWQWNPSDRPSFAEIHQ 257
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 2e-07
Identities = 56/190 (29%), Positives = 83/190 (43%), Gaps = 29/190 (15%)
Query: 495 LYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 553
LY MEY L + F + A +I GL +H +GII+RDL +N+ D
Sbjct: 76 LYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLD 135
Query: 554 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ---VGTYFYTAPEIEQGWP 610
+ IKI DFG+ K E + VDG GT Y APEI P
Sbjct: 136 SEGHIKIADFGMCK----EHM--------------VDGVTTRTFCGTPDYIAPEIIAYQP 177
Query: 611 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLR 667
+ D ++ G++ +E+ PF E ++ S ++ P S ++K E S+ +
Sbjct: 178 -YGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKS-LSK--EAVSICK 233
Query: 668 RLMSPSPSDR 677
LM+ PS R
Sbjct: 234 GLMTKHPSKR 243
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 53.7 bits (129), Expect = 2e-07
Identities = 52/170 (30%), Positives = 75/170 (44%), Gaps = 30/170 (17%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL-EQLDQDAA-FPTDT 584
QI EG+A I + IHRDL NI KI DFGLA+ ++ E ++ A FP
Sbjct: 110 QIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIK- 168
Query: 585 GGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQ 639
+TAPE I G I K+D++S GI+ E+ P+ M
Sbjct: 169 ---------------WTAPEAINYGTFTI--KSDVWSFGILLTEIVTYGRIPYP-GMTNP 210
Query: 640 IVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688
V+ +L++ +P P E L+R P +RP+ E L+ L
Sbjct: 211 EVIQNLERGYRMPRPDNCP--EELYELMRLCWKEKPEERPT-FEYLRSVL 257
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 53.4 bits (128), Expect = 2e-07
Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 18/134 (13%)
Query: 524 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTD 583
+ R I G+ ++ G +HRDL NI ++ K+ DFGL++ L + D +AA+ T
Sbjct: 111 MLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVL---EDDPEAAYTTR 167
Query: 584 TGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 639
G + + +TAPE + K +D++S GIV +E+ P+ M Q
Sbjct: 168 GGKIPIR---------WTAPEAIA-YRKFTSASDVWSYGIVMWEVMSYGERPYWE-MSNQ 216
Query: 640 IVLSDLKQKGELPP 653
V+ +++ LP
Sbjct: 217 DVIKAIEEGYRLPA 230
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Score = 53.9 bits (129), Expect = 2e-07
Identities = 59/254 (23%), Positives = 102/254 (40%), Gaps = 67/254 (26%)
Query: 389 LGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 446
+G G +GHV K K D + YA+K+I S+ RE+A L L+H +V+
Sbjct: 9 VGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSA----CREIALLRELKHPNVIALQ 64
Query: 447 QAWFETG------VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
+ + + D+ +W ++ +N+ +Q+
Sbjct: 65 KVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKP------------------MQL- 105
Query: 501 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF----DARN 556
PR++ + L QI++G+ ++H ++HRDL P NI R
Sbjct: 106 --PRSMVK--------------SLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERG 149
Query: 557 DIKIGDFGLAKFLK--LEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614
+KI D G A+ L+ L D V T++Y APE+ G +
Sbjct: 150 RVKIADMGFARLFNSPLKPL--------------ADLDPVVVTFWYRAPELLLGARHYTK 195
Query: 615 KADMYSLGIVFFEL 628
D++++G +F EL
Sbjct: 196 AIDIWAIGCIFAEL 209
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317 |
| >gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Score = 53.0 bits (127), Expect = 3e-07
Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 33/213 (15%)
Query: 490 LESTYLYIQMEYCP-----RTLR--QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 542
+ES + +E+CP LR + + K++ + ++ GL +H IH
Sbjct: 65 IESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMA-QKDVLQRMACEVASGLLWLHQADFIH 123
Query: 543 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 602
DL N A +KIGD+GLA LEQ +D D V + + A
Sbjct: 124 SDLALRNCQLTADLSVKIGDYGLA----LEQYPEDYYITKDCHAVPLR---------WLA 170
Query: 603 PEIEQGW------PKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLK-QKGEL 651
PE+ + +K++++SLG+ +EL+ P+ + Q++ ++ Q +L
Sbjct: 171 PELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKL 230
Query: 652 P-PSWVAKFSEQESLLRRLMSPSPSDRPSATEL 683
P P K+S++ + + P RP+A E+
Sbjct: 231 PKPQLDLKYSDRWYEVMQFCWLDPETRPTAEEV 263
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269 |
| >gnl|CDD|226228 COG3705, HisZ, ATP phosphoribosyltransferase involved in histidine biosynthesis [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 3e-07
Identities = 62/279 (22%), Positives = 98/279 (35%), Gaps = 33/279 (11%)
Query: 773 HLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYE-IS 831
LE L G +R KL G L L + +P R + + R
Sbjct: 43 TLEPADPLLDGAGEDLRRRLFKLEDETGGRLGLRPDFTIPVARIHATLLAGTPLRLSYAG 102
Query: 832 SVYRRAIGHS-PPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGD 890
V+R G +LQ +++G SA +AEV+ + + + D+ L G
Sbjct: 103 KVFRAREGRHGRRAEFLQAGIELLGDDSAAADAEVIALALAALKA---LGLADLKLELGH 159
Query: 891 --LLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVV 948
+ A+ + AG+ R ++ K ++ L+ L+ +
Sbjct: 160 AGIFRALLAAAGLPGGWRARLRRAFG-------------DKDLLGLELLVLAAPLSPELR 206
Query: 949 NRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDE---LYLRIWRIEKNIYIDALMPP 1005
RL + L G + L R RG L AL+E L R+ + I +D
Sbjct: 207 GRLSEL-LALLGGRE-VLERARGLLDELMAQGIALNEGRALADIARRLIEKIALDLGRLR 264
Query: 1006 IESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLL 1044
Y+ L F ++ LA GGRYD LL
Sbjct: 265 HFDYYTGLVFLAYADGLGDA--------LASGGRYDGLL 295
|
Length = 390 |
| >gnl|CDD|234331 TIGR03724, arch_bud32, Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Score = 51.4 bits (124), Expect = 5e-07
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 497 IQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 555
I MEY + L+ V E E L R+I + +H GI+H DLT +NI
Sbjct: 74 IVMEYIEGKPLKDVIE-------EGNDELLREIGRLVGKLHKAGIVHGDLTTSNIIVRDD 126
Query: 556 NDIKIGDFGLAKF 568
+ + DFGL K+
Sbjct: 127 -KLYLIDFGLGKY 138
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine [Unknown function, General]. Length = 199 |
| >gnl|CDD|237847 PRK14879, PRK14879, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 51.4 bits (124), Expect = 5e-07
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Query: 497 IQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN-IFFDA 554
I MEY L+ + S + EL+ + R + +H GIIH DLT +N I
Sbjct: 76 IVMEYIEGEPLKDLINSNGMEELELSREIGRLV----GKLHSAGIIHGDLTTSNMILSG- 130
Query: 555 RNDIKIGDFGLAKF 568
I + DFGLA+F
Sbjct: 131 -GKIYLIDFGLAEF 143
|
Length = 211 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 7e-07
Identities = 39/133 (29%), Positives = 55/133 (41%), Gaps = 37/133 (27%)
Query: 519 ELAWHLFRQ--------------IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFG 564
EL +HL R+ I L ++H II+RDL P NI D++ + + DFG
Sbjct: 82 ELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFG 141
Query: 565 LAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV--GTYFYTAPEIEQGWPKIDEKADMYSLG 622
L K G+ T GT Y APE+ + P D D + LG
Sbjct: 142 LCK-----------------EGIEHSKTTSTFCGTPEYLAPEVLRKQP-YDRTVDWWCLG 183
Query: 623 IVFFELWH---PF 632
V +E+ + PF
Sbjct: 184 AVLYEMLYGLPPF 196
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 51.9 bits (125), Expect = 8e-07
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS--LPVNDRILREVATLSRL 437
L D+E L LG G FG V + GR A+KKI + ++ P+ LRE+ L +L
Sbjct: 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPIT--ALREIKILKKL 64
Query: 438 QHQHVVR 444
+H +VV
Sbjct: 65 KHPNVVP 71
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Score = 51.8 bits (125), Expect = 8e-07
Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 34/142 (23%)
Query: 514 DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI-FFDARNDIKIGDFGLAKFLKLE 572
+ + RQ+VE L +H IIH D+ N+ + A++ I + D+GL K +
Sbjct: 104 GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP 163
Query: 573 QLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI-----DEKADMYSLGIVFFE 627
D GT Y +PE KI D D +++G++ +E
Sbjct: 164 SC-YD------------------GTLDYFSPE------KIKGHNYDVSFDWWAVGVLTYE 198
Query: 628 LW---HPFSTAMERQIVLSDLK 646
L HPF + ++ L L
Sbjct: 199 LLTGKHPFKEDEDEELDLESLL 220
|
Length = 267 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 9e-07
Identities = 51/187 (27%), Positives = 78/187 (41%), Gaps = 23/187 (12%)
Query: 495 LYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 553
LY MEY L + F + A +I GL +H +GII+RDL +N+ D
Sbjct: 76 LYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD 135
Query: 554 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613
+ IKI DFG+ K + GV+ GT Y APEI P
Sbjct: 136 SEGHIKIADFGMCKENMWD-------------GVTTKTF--CGTPDYIAPEIIAYQP-YG 179
Query: 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 670
+ D ++ G++ +E+ PF E ++ S ++ P S E ++ + LM
Sbjct: 180 KSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMS---KEAVAICKGLM 236
Query: 671 SPSPSDR 677
+ P R
Sbjct: 237 TKHPGKR 243
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 9e-07
Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 33/187 (17%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586
QI G+ H+H I++RD+ P N+ D + + ++ D GLA LK G
Sbjct: 103 QITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELK--------------DG 148
Query: 587 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLS 643
++ T + GT Y APEI + P D +++G +E+ PF E+ +
Sbjct: 149 KTI--TQRAGTNGYMAPEILKEEP-YSYPVDWFAMGCSIYEMVAGRTPFKDHKEK-VAKE 204
Query: 644 DLKQKG------------ELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691
+LK++ + + + RL S +D P E + P+
Sbjct: 205 ELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINFPR 264
Query: 692 MEYELLD 698
+E L+
Sbjct: 265 LEAGLIP 271
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 51.6 bits (123), Expect = 1e-06
Identities = 65/252 (25%), Positives = 96/252 (38%), Gaps = 59/252 (23%)
Query: 389 LGHGGFGHVVL--CKN---KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVV 443
LG G FG V L C N + D AVK LKD S RE L+ LQH+H+V
Sbjct: 13 LGEGAFGKVFLAECYNLCPEQDKILVAVKT--LKDASDNARKDFHREAELLTNLQHEHIV 70
Query: 444 RYYQAWFETGVADFDGDSM------WGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
++Y E GD + G L + F A + + N+
Sbjct: 71 KFYGVCVE-------GDPLIMVFEYMKHGDL--NKFLRAHGPDAVLMAEGNR-------- 113
Query: 498 QMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
P L Q H+ +QI G+ ++ Q +HRDL N
Sbjct: 114 -----PAELTQ----------SQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL 158
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617
+KIGDFG+++ + TD V G P + K ++D
Sbjct: 159 VKIGDFGMSR----------DVYSTDYYRVG----GHTMLPIRWMPPESIMYRKFTTESD 204
Query: 618 MYSLGIVFFELW 629
++SLG+V +E++
Sbjct: 205 VWSLGVVLWEIF 216
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 1e-06
Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 40/182 (21%)
Query: 511 ESYDHFDKELAWHLFR------QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFG 564
E + H +E + L R +++ L ++H +I+RDL P NI D + I + DFG
Sbjct: 79 ELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFG 138
Query: 565 LAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKIDEKADMYSLG 622
L K L ++ D+ F GT Y APE+ G+ K D ++LG
Sbjct: 139 LCK-LNMKDDDKTNTF--------------CGTPEYLAPELLLGHGYTKA---VDWWTLG 180
Query: 623 IVFFELWH---PF----STAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 675
++ +E+ PF M R+I+ L+ P + + + LL L+S P+
Sbjct: 181 VLLYEMLTGLPPFYDENVNEMYRKILQEPLR----FPDGFD---RDAKDLLIGLLSRDPT 233
Query: 676 DR 677
R
Sbjct: 234 RR 235
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 2e-06
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 21/105 (20%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPTDT 584
QI EG+A+I + IHRDL N+ KI DFGLA+ ++ + + A FP
Sbjct: 111 QIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK- 169
Query: 585 GGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFEL 628
+TAPE I G I K+D++S GI+ +E+
Sbjct: 170 ---------------WTAPEAINFGSFTI--KSDVWSFGILLYEI 197
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 2e-06
Identities = 72/317 (22%), Positives = 129/317 (40%), Gaps = 68/317 (21%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
++ E L LG G +G V ++ G A+K+IRL+ N +I+ E+ L +
Sbjct: 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFN-QIIMELDILHKAVSP 59
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
++V +Y A+F G + M G+L A A E+ L
Sbjct: 60 YIVDFYGAFFIEGAVYMCMEYMDA-GSLDKLY----AGGVATEGIPEDVLRRI------- 107
Query: 501 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARNDIK 559
+Y +V+GL + + IIHRD+ P N+ + +K
Sbjct: 108 -----------TY-------------AVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVK 143
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPK----IDE 614
+ DFG++ L S+ T +G Y APE I+ G P
Sbjct: 144 LCDFGVSGNLV----------------ASLAKT-NIGCQSYMAPERIKSGGPNQNPTYTV 186
Query: 615 KADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQ--KGELPPSWVAKFS-EQESLLRR 668
++D++SLG+ E+ +P+ I + L G+ PP+ + +S + + + +
Sbjct: 187 QSDVWSLGLSILEMALGRYPYPPETYANI-FAQLSAIVDGD-PPTLPSGYSDDAQDFVAK 244
Query: 669 LMSPSPSDRPSATELLQ 685
++ P+ RP+ +LL+
Sbjct: 245 CLNKIPNRRPTYAQLLE 261
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286 |
| >gnl|CDD|232978 TIGR00443, hisZ_biosyn_reg, ATP phosphoribosyltransferase, regulatory subunit | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 2e-06
Identities = 66/267 (24%), Positives = 106/267 (39%), Gaps = 43/267 (16%)
Query: 792 TVKLLTHGGDLLELSHELRLPFIRWAIS----NQKSSFKRYEISSVYRRA-IGHSPPNRY 846
KL G +L L ++ P R +S ++ + +V+R G +
Sbjct: 52 LFKLFDQLGRVLGLRPDMTAPIAR-LVSTRLRDRPLPLRLCYAGNVFRTNESGGGRSREF 110
Query: 847 LQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLN--HGDLLEAIWSWAGIKAE 904
Q ++IG +AEV+ + ++ + D + H L+ A+ AG+ E
Sbjct: 111 TQAGVELIGAGGPAADAEVIALLIEALKA---LGLKDFKIELGHVGLVRALLEEAGLPEE 167
Query: 905 HREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQ 964
RE + E LA K +V +L+ EL L+ V RL + R G ++
Sbjct: 168 AREALREALA-------------RKDLVALEELVAELGLSPEVRERLLAL-PRLRGDGEE 213
Query: 965 ALPRLRGALPADKPTRKALDELYLRIWRI------EKNIYID-ALMPPIESYHRNLFFQV 1017
L R AL + ALDEL + + E+ I +D L+ Y+ L F+
Sbjct: 214 VLEEAR-ALAGSETAEAALDELE-AVLELLEARGVEEYISLDLGLVRGY-HYYTGLIFEG 270
Query: 1018 FSVKEKYPATLVEGTLLAVGGRYDYLL 1044
++ P LA GGRYD LL
Sbjct: 271 YAPGLGAP--------LAGGGRYDELL 289
|
Apparant second copies of histidyl-tRNA synthetase, found in Bacillus subtilis, Synechocystis sp., Aquifex aeolicus, and others, are in fact a regulatory subunit of ATP phosphoribosyltransferase, and usually encoded by a gene adjacent to that encoding the catalytic subunit [Amino acid biosynthesis, Histidine family]. Length = 313 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 2e-06
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 20/164 (12%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586
QI +G++++ ++HRDL N+ + N +KI DFGLA+ L +++ + A
Sbjct: 117 QIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHA-------- 168
Query: 587 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVL 642
DG G+V + I + ++D++S G+ +EL P+ R+I
Sbjct: 169 ---DG-GKVPIKWMALESILH--RRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREI-- 220
Query: 643 SDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686
DL +KGE P + ++ + RP EL+ +
Sbjct: 221 PDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDE 264
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 2e-06
Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 39/179 (21%)
Query: 512 SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL 571
+ + +E ++V L +H +GI+ RDL PNNI D R I++ F ++
Sbjct: 78 KFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVE- 136
Query: 572 EQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW-- 629
+ D +A Y APE+ G + E D +SLG + FEL
Sbjct: 137 DSCDGEAV-----------------ENMYCAPEV-GGISEETEACDWWSLGAILFELLTG 178
Query: 630 ------HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 682
HP + + P WV++ E SLL++L+ +P++R A
Sbjct: 179 KTLVECHPSGINTHTTLNI----------PEWVSE--EARSLLQQLLQFNPTERLGAGV 225
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237 |
| >gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 3e-06
Identities = 57/245 (23%), Positives = 92/245 (37%), Gaps = 52/245 (21%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586
+I L +H +GII+RDL +N+ DA IK+ D+G+ K + P DT
Sbjct: 104 EISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCK---------EGIRPGDTTS 154
Query: 587 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW-------------HP-- 631
GT Y APEI +G D ++LG++ FE+ +P
Sbjct: 155 TF------CGTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQ 207
Query: 632 ------FSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685
F +E+QI +P S K S S+L+ ++ P +R Q
Sbjct: 208 NTEDYLFQVILEKQI---------RIPRSLSVKAS---SVLKGFLNKDPKERLGC--HPQ 253
Query: 686 DALPPQMEYELLDNI-LRMMHSSEDTSIYDKVVSSIFDEETLDMKHHAGTLRLNRDNTSS 744
+ NI ++ + Y + S D + D + ++L D+
Sbjct: 254 TGFRDIKSHPFFRNIDWDLLEQKQVLPPYKPNIESDRDLDNFDPQFTDEPVQLTPDDPDV 313
Query: 745 IQYSD 749
I D
Sbjct: 314 IARID 318
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 3e-06
Identities = 34/155 (21%), Positives = 64/155 (41%), Gaps = 25/155 (16%)
Query: 495 LYIQMEYCPR--TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
LYI E+ L + + K++ + + + EG+ ++ IHRDL N
Sbjct: 74 LYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLV 133
Query: 553 DARNDIKIGDFGLAKFLKLEQLDQD--AAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610
+ +K+ DFG+ +++ ++ A FP ++ PE+ +
Sbjct: 134 SSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVK----------------WSPPEVFN-FS 176
Query: 611 KIDEKADMYSLGI----VFFELWHPFSTAMERQIV 641
K K+D++S G+ VF E PF ++V
Sbjct: 177 KYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVV 211
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 3e-06
Identities = 40/162 (24%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 531 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 590
G+ ++ + IHRDL N +N +KI DFG+++ +++ TGG+
Sbjct: 106 GMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSR-------EEEDGVYASTGGMK-- 156
Query: 591 GTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFS------TAMERQIVLSD 644
Q+ +TAPE + + ++D++S GI+ LW FS + Q
Sbjct: 157 ---QIPVK-WTAPE-ALNYGRYSSESDVWSFGIL---LWEAFSLGAVPYANLSNQQTREA 208
Query: 645 LKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686
++Q LP + L+ R P RPS + + Q+
Sbjct: 209 IEQGVRLPCPELCP-DAVYRLMERCWEYDPGQRPSFSTVHQE 249
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 49.7 bits (118), Expect = 4e-06
Identities = 48/246 (19%), Positives = 94/246 (38%), Gaps = 58/246 (23%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+ + +G G G V + G+ A+K+I L+ + P + I+ E+ + L++ ++
Sbjct: 21 YTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ--PKKELIINEILVMKELKNPNI 78
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
V + ++ + G E L++ MEY
Sbjct: 79 VNFLDSF---------------------------------LVGDE-------LFVVMEYL 98
Query: 503 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 562
+ D+ + R+ ++ L +H +IHRD+ +N+ +K+ D
Sbjct: 99 AGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTD 158
Query: 563 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622
FG + EQ + + VGT ++ APE+ K D++SLG
Sbjct: 159 FGFCAQITPEQSKR---------------STMVGTPYWMAPEVVTR-KAYGPKVDIWSLG 202
Query: 623 IVFFEL 628
I+ E+
Sbjct: 203 IMAIEM 208
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 4e-06
Identities = 53/185 (28%), Positives = 73/185 (39%), Gaps = 33/185 (17%)
Query: 389 LGHGGFGHVVL--CKNKL---DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVV 443
LG G FG V L C N L D AVK LK+ S RE L+ LQHQH+V
Sbjct: 13 LGEGAFGKVFLAECHNLLPEQDKMLVAVKA--LKEASESARQDFQREAELLTVLQHQHIV 70
Query: 444 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC- 502
R+Y GV +G + NR S G + K+ + +
Sbjct: 71 RFY------GVCT-EGRPLLMVFEYMRHGDLNRFLRSH---GPDAKILAGG---EDVAPG 117
Query: 503 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 562
TL Q+ + QI G+ ++ +HRDL N +KIGD
Sbjct: 118 QLTLGQML------------AIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGD 165
Query: 563 FGLAK 567
FG+++
Sbjct: 166 FGMSR 170
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 5e-06
Identities = 43/178 (24%), Positives = 69/178 (38%), Gaps = 53/178 (29%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586
Q+ G+A++ + +HRDL N+ R+ KI DFG+++ L
Sbjct: 103 QVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALG---------------- 146
Query: 587 VSVDGTGQVGTYFYTAPEIEQG--WP------------KIDEKADMYSLGIVFFELWHPF 632
G+ +Y A WP K K+D++S G+ LW F
Sbjct: 147 --------AGSDYYRA---TTAGRWPLKWYAPECINYGKFSSKSDVWSYGVT---LWEAF 192
Query: 633 STA------MERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATEL 683
S M+ V++ L+ LP P + E S++ P DRP+ +EL
Sbjct: 193 SYGAKPYGEMKGAEVIAMLESGERLPRPEECPQ--EIYSIMLSCWKYRPEDRPTFSEL 248
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 6e-06
Identities = 52/202 (25%), Positives = 81/202 (40%), Gaps = 52/202 (25%)
Query: 505 TLRQVFESYDHF--------DKELAWHLFRQ--------------IVEGLAHIHGQGIIH 542
L+ F+++D EL +HL R+ IV L ++H + +++
Sbjct: 59 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVY 118
Query: 543 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 602
RD+ N+ D IKI DFGL K E + A T GT Y A
Sbjct: 119 RDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKT-----------FCGTPEYLA 163
Query: 603 PEIEQGWPKIDEKADMYSLGIVFFELW---HPF-STAMER---QIVLSDLKQKGELPPSW 655
PE+ + D + LG+V +E+ PF + ER I++ +++ L P
Sbjct: 164 PEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSP-- 220
Query: 656 VAKFSEQESLLRRLMSPSPSDR 677
E +SLL L+ P R
Sbjct: 221 -----EAKSLLAGLLKKDPKQR 237
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 6e-06
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 25/177 (14%)
Query: 516 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD 575
F +E + + EG+A++ +IHRDL N +K+ DFG+ +F+ +Q
Sbjct: 97 FSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY- 155
Query: 576 QDAAFPTDTGGVSVDGTGQVGTYF---YTAPEIEQGWPKIDEKADMYSLGIVFFELWHPF 632
T GT F +++PE+ + K K+D++S G++ +E++
Sbjct: 156 ----------------TSSTGTKFPVKWSSPEVFS-FSKYSSKSDVWSFGVLMWEVFSEG 198
Query: 633 STAMERQI---VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686
T E + V+ + L +A S E L++ P DRPS + LL
Sbjct: 199 KTPYENRSNSEVVETINAGFRLYKPRLASQSVYE-LMQHCWKERPEDRPSFSLLLHQ 254
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 48.9 bits (116), Expect = 6e-06
Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 25/159 (15%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPTDT 584
QI +G+A+I IHRDL NI KI DFGLA+ ++ + Q A FP
Sbjct: 110 QIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIK- 168
Query: 585 GGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQI 640
+TAPE + + K+D++S GI+ EL P+ + R+
Sbjct: 169 ---------------WTAPEAAL-YGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE- 211
Query: 641 VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 679
VL +++ +P S E L++ P +RP+
Sbjct: 212 VLEQVERGYRMPCPQGCPESLHE-LMKLCWKKDPDERPT 249
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 6e-06
Identities = 46/203 (22%), Positives = 74/203 (36%), Gaps = 38/203 (18%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV---NDRILREVATLSR 436
+DF + LG G FG V + V K K+ + + E+ R
Sbjct: 131 KDDFVLGKKLGEGAFGVVY--------KASLVNKQSKKEGKYVLKKATEYGAVEIWMNER 182
Query: 437 LQH--QHVVRYYQAWFETGVADFDGDSMW------GSGTLASSTFSNRAASSADVTGQEN 488
++ + + F V+ D W G TLA S + +
Sbjct: 183 VRRACPNSCADFVYGFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVE------ 236
Query: 489 KLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 548
YL +++ P+ L + + ++ + RQI+ L +H GI+HRD+ P
Sbjct: 237 ----PYLLGKVQDLPKGLER--------ENKIIQTIMRQILFALDGLHSTGIVHRDVKPQ 284
Query: 549 NIFFD-ARNDIKIGDFGLAKFLK 570
NI F KI D G A L+
Sbjct: 285 NIIFSEGSGSFKIIDLGAAADLR 307
|
Length = 566 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 7e-06
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 22/130 (16%)
Query: 526 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTG 585
QI +G++++ + ++HRDL N+ +KI DFGLAK L D
Sbjct: 116 VQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------DVDEK 164
Query: 586 GVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQI 640
+G G+V + A E I K+D++S G+ +EL P+ +I
Sbjct: 165 EYHAEG-GKVPIK-WMALESILHR--IYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEI 220
Query: 641 VLSDLKQKGE 650
DL +KGE
Sbjct: 221 --PDLLEKGE 228
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 48.9 bits (116), Expect = 7e-06
Identities = 48/169 (28%), Positives = 74/169 (43%), Gaps = 28/169 (16%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQL--DQDAAFPTDT 584
QI EG+A I + IHRDL NI A KI DFGLA+ ++ + + A FP
Sbjct: 110 QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK- 168
Query: 585 GGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQ 639
+TAPE I G I K+D++S GI+ E+ P+ +
Sbjct: 169 ---------------WTAPEAINFGSFTI--KSDVWSFGILLMEIVTYGRIPYPGMSNPE 211
Query: 640 IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688
++ + ++G P E +++ R P +RP+ E +Q L
Sbjct: 212 VIRA--LERGYRMPRPENCPEELYNIMMRCWKNRPEERPT-FEYIQSVL 257
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 7e-06
Identities = 58/250 (23%), Positives = 101/250 (40%), Gaps = 69/250 (27%)
Query: 386 LQPLGHGGFGHVVLCKNKLDGRH-YAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 444
L+ LG G FG V K + G++ A+K I+ S D + E + +L H+ +V+
Sbjct: 9 LKELGTGQFGVVKYGKWR--GQYDVAIKMIKEGSMS---EDEFIEEAKVMMKLSHEKLVQ 63
Query: 445 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 504
Y GV T Q +YI EY
Sbjct: 64 LY------GVC----------------------------TKQRP------IYIVTEYMSN 83
Query: 505 --TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 562
L + E F + + + EG+A++ + IHRDL N D + +K+ D
Sbjct: 84 GCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSD 143
Query: 563 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF---YTAPEIEQGWPKIDEKADMY 619
FGL++++ LD + T VG+ F ++ PE+ + K K+D++
Sbjct: 144 FGLSRYV----LDDEY-------------TSSVGSKFPVRWSPPEVLL-YSKFSSKSDVW 185
Query: 620 SLGIVFFELW 629
+ G++ +E++
Sbjct: 186 AFGVLMWEVY 195
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 7e-06
Identities = 73/321 (22%), Positives = 121/321 (37%), Gaps = 98/321 (30%)
Query: 389 LGHGGFGHVVLCKNKLDGRHY---AVKKIRLKDKSLPVNDRI--LREVATLSRLQHQHVV 443
+G G FG V + KL G+ A+K LK S R+ L E + + + H +++
Sbjct: 12 IGGGEFGEVCRGRLKLPGKKEIDVAIKT--LKAGSSD-KQRLDFLTEASIMGQFDHPNII 68
Query: 444 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP 503
R GV VT +S + I EY
Sbjct: 69 RLE------GV----------------------------VT------KSRPVMIITEY-- 86
Query: 504 RTLRQVFESYDHF----DKELAW----HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 555
S D F D + + R I G+ ++ +HRDL NI ++
Sbjct: 87 ----MENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSN 142
Query: 556 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615
K+ DFGL++ L+ D +A + T G + + +TAPE + K
Sbjct: 143 LVCKVSDFGLSRRLE----DSEATYTTKGGKIPIR---------WTAPEAIA-YRKFTSA 188
Query: 616 ADMYSLGIVFFEL--------WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLR 667
+D++S GIV +E+ W M Q V+ ++ LPP + S L
Sbjct: 189 SDVWSFGIVMWEVMSYGERPYWD-----MSNQDVIKAVEDGYRLPPP-----MDCPSALY 238
Query: 668 RLM----SPSPSDRPSATELL 684
+LM ++RP+ ++++
Sbjct: 239 QLMLDCWQKDRNERPTFSQIV 259
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 7e-06
Identities = 43/193 (22%), Positives = 70/193 (36%), Gaps = 43/193 (22%)
Query: 386 LQPLGHGGFGHVVL--CKNKLDGRHYAVKKIR-LKDKSLPVNDR-ILREVATLSRLQHQH 441
+ LG G FG V L C + + ++ LK+ + + RE L+ QH++
Sbjct: 10 KRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHEN 69
Query: 442 VVRYYQAWFETGVADFDGDSMW------GSGTLASSTFSN-RAASSADVTGQENKLESTY 494
+V++Y GV +GD G L S+ A+
Sbjct: 70 IVKFY------GVC-TEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMG----- 117
Query: 495 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 554
TL Q+ + QI G+ ++ Q +HRDL N
Sbjct: 118 --------ELTLSQLL------------QIAVQIASGMVYLASQHFVHRDLATRNCLVGY 157
Query: 555 RNDIKIGDFGLAK 567
+KIGDFG+++
Sbjct: 158 DLVVKIGDFGMSR 170
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 48.6 bits (115), Expect = 9e-06
Identities = 64/309 (20%), Positives = 113/309 (36%), Gaps = 67/309 (21%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+ + +G G G V + G+ A++++ L+ + P + I+ E+ + ++ ++
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNI 79
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
V Y ++ GD +W + MEY
Sbjct: 80 VNYLDSYLV-------GDELW---------------------------------VVMEYL 99
Query: 503 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 562
+ D+ + R+ ++ L +H +IHRD+ +NI +K+ D
Sbjct: 100 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTD 159
Query: 563 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622
FG + EQ + + VGT ++ APE+ K D++SLG
Sbjct: 160 FGFCAQITPEQSKR---------------STMVGTPYWMAPEVVTR-KAYGPKVDIWSLG 203
Query: 623 IVFFELWH---PFSTAME-RQIVLSDLKQKGEL--PPSWVAKFSEQESLLRRLMSPSPSD 676
I+ E+ P+ R + L EL P A F + L R +
Sbjct: 204 IMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRD---FLNRCLDMDVEK 260
Query: 677 RPSATELLQ 685
R SA ELLQ
Sbjct: 261 RGSAKELLQ 269
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 1e-05
Identities = 57/253 (22%), Positives = 94/253 (37%), Gaps = 67/253 (26%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 439
+ + + LQ +G G FG V+L + G AVK I K+ L E + +++L+H
Sbjct: 5 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCI----KNDATAQAFLAEASVMTQLRH 58
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
++V+ E E LYI
Sbjct: 59 SNLVQLLGVIVE---------------------------------------EKGGLYIVT 79
Query: 500 EYCPR-TLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 556
EY + +L S + + E + ++ +HRDL N+ N
Sbjct: 80 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDN 139
Query: 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616
K+ DFGL K +A+ DTG + V +TAPE + K K+
Sbjct: 140 VAKVSDFGLTK---------EASSTQDTGKLPVK---------WTAPEALRE-KKFSTKS 180
Query: 617 DMYSLGIVFFELW 629
D++S GI+ +E++
Sbjct: 181 DVWSFGILLWEIY 193
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 48.0 bits (114), Expect = 1e-05
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 13/105 (12%)
Query: 524 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTD 583
+ R I G+ ++ +HRDL NI ++ + K+ DFGL++ L + D + + T
Sbjct: 112 MLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVL---EDDPEGTYTTS 168
Query: 584 TGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 628
G + + +TAPE + K +D++S GIV +E+
Sbjct: 169 GGKIPIR---------WTAPE-AIAYRKFTSASDVWSFGIVMWEV 203
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 48.2 bits (114), Expect = 1e-05
Identities = 67/310 (21%), Positives = 117/310 (37%), Gaps = 69/310 (22%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+ + +G G G V + G+ A+K++ L+ + P + I+ E+ + ++ ++
Sbjct: 21 YTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKNPNI 78
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
V Y ++ GD +W + MEY
Sbjct: 79 VNYLDSYLV-------GDELW---------------------------------VVMEYL 98
Query: 503 PR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 561
+L V + ++A + R+ ++ L +H +IHRD+ +NI +K+
Sbjct: 99 AGGSLTDVVTETCMDEGQIA-AVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLT 157
Query: 562 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621
DFG + EQ + + VGT ++ APE+ K D++SL
Sbjct: 158 DFGFCAQITPEQSKR---------------STMVGTPYWMAPEVVTR-KAYGPKVDIWSL 201
Query: 622 GIVFFELWH---PFSTAME-RQIVLSDLKQKGEL--PPSWVAKFSEQESLLRRLMSPSPS 675
GI+ E+ P+ R + L EL P A F + L R +
Sbjct: 202 GIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRD---FLNRCLEMDVD 258
Query: 676 DRPSATELLQ 685
R SA ELLQ
Sbjct: 259 RRGSAKELLQ 268
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|226168 COG3642, COG3642, Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 1e-05
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 9/73 (12%)
Query: 497 IQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 555
I MEY L+ E E L R++ + +H GI+H DLT +NI
Sbjct: 76 IVMEYIEGELLKDALE-------EARPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGG 128
Query: 556 NDIKIGDFGLAKF 568
I DFGL +F
Sbjct: 129 RIYFI-DFGLGEF 140
|
Length = 204 |
| >gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 2e-05
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 16/102 (15%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586
+I L ++H +GII+RDL +N+ D+ IK+ D+G+ K + P DT
Sbjct: 104 EISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK---------EGLRPGDT-- 152
Query: 587 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 628
+ GT Y APEI +G D ++LG++ FE+
Sbjct: 153 ----TSTFCGTPNYIAPEILRG-EDYGFSVDWWALGVLMFEM 189
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329 |
| >gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 2e-05
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 44/180 (24%)
Query: 519 ELAWHLFR--------------QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFG 564
EL +HL R +IV L ++H +++RDL N+ D IKI DFG
Sbjct: 81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFG 140
Query: 565 LAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 624
L K E + A T GT Y APE+ + D + LG+V
Sbjct: 141 LCK----EGISDGATMKT-----------FCGTPEYLAPEVLED-NDYGRAVDWWGLGVV 184
Query: 625 FFELW---HPF-STAMER---QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677
+E+ PF + E+ I++ +++ L P E +SLL L+ P R
Sbjct: 185 MYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSP-------EAKSLLAGLLKKDPKQR 237
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 2e-05
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 16/102 (15%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586
+I L +H +GII+RDL +N+ DA IK+ D+G+ K + P DT
Sbjct: 104 EICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCK---------EGLGPGDTTS 154
Query: 587 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 628
GT Y APEI +G + D ++LG++ FE+
Sbjct: 155 TF------CGTPNYIAPEILRG-EEYGFSVDWWALGVLMFEM 189
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 4e-05
Identities = 42/156 (26%), Positives = 62/156 (39%), Gaps = 36/156 (23%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPTDT 584
Q+ G+A+I IHRDL NI KI DFGLA+ ++ + Q A FP
Sbjct: 110 QVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIK- 168
Query: 585 GGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSD 644
+TAPE + + K+D++S G I+L++
Sbjct: 169 ---------------WTAPEAAL-YGRFTIKSDVWSFG-----------------ILLTE 195
Query: 645 LKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA 680
L KG +P + E + R P P D P +
Sbjct: 196 LVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPIS 231
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 6e-05
Identities = 73/315 (23%), Positives = 129/315 (40%), Gaps = 57/315 (18%)
Query: 389 LGHGGFGHVVLC-KNKLDGR----HYAVKKIRLKDKSLPVNDR-ILREVATLSRLQHQHV 442
LG G FG VV +L GR AVK LK+ + R +L E L ++ H HV
Sbjct: 8 LGEGEFGKVVKATAFRLKGRAGYTTVAVKM--LKENASSSELRDLLSEFNLLKQVNHPHV 65
Query: 443 VRYYQAWFETG----VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
++ Y A + G + ++ + +GS L S +R + + G + S+YL
Sbjct: 66 IKLYGACSQDGPLLLIVEY---AKYGS--LRSFLRESRKVGPSYL-GSDGNRNSSYLDNP 119
Query: 499 MEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
E T+ + AW QI G+ ++ ++HRDL N+ +
Sbjct: 120 DER-ALTMGDLIS--------FAW----QISRGMQYLAEMKLVHRDLAARNVLVAEGRKM 166
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD--GTGQVGTYFYTAPEIEQGWPKIDEKA 616
KI DFGL++ + ++D+ G + V + + YT ++
Sbjct: 167 KISDFGLSR----DVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTT------------QS 210
Query: 617 DMYSLGIVFFEL----WHPF-STAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 671
D++S G++ +E+ +P+ A ER L + E P + E +L+
Sbjct: 211 DVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCS---EEMYNLMLTCWK 267
Query: 672 PSPSDRPSATELLQD 686
P RP+ ++ ++
Sbjct: 268 QEPDKRPTFADISKE 282
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 7e-05
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 32/171 (18%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPTDT 584
QI G+A++ +HRDL NI K+ DFGLA+ ++ + Q A FP
Sbjct: 110 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 168
Query: 585 GGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQI 640
+TAPE + + K+D++S GI+ EL P+ + R++
Sbjct: 169 ---------------WTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 212
Query: 641 VLSDLKQKG---ELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688
+ D ++G PP + L+ + P +RP+ E LQ L
Sbjct: 213 L--DQVERGYRMPCPPECPESLHD---LMCQCWRKEPEERPT-FEYLQAFL 257
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Score = 45.3 bits (107), Expect = 8e-05
Identities = 56/248 (22%), Positives = 95/248 (38%), Gaps = 60/248 (24%)
Query: 389 LGHGGFGHVV--LCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 446
LG G FG V + K K + AVK ++ + + D +LRE + +L + ++VR
Sbjct: 3 LGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRM- 61
Query: 447 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM-EYCPRT 505
G+ + ES L +++ E P
Sbjct: 62 -----IGICE---------------------------------AESWMLVMELAELGP-- 81
Query: 506 LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGL 565
L + + H ++ L Q+ G+ ++ +HRDL N+ ++ KI DFGL
Sbjct: 82 LNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGL 141
Query: 566 AKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVF 625
+K A D G+ +Y APE + K K+D++S G++
Sbjct: 142 SK-----------ALGADENYYKAKTHGKWPVKWY-APEC-MNYYKFSSKSDVWSFGVL- 187
Query: 626 FELWHPFS 633
+W FS
Sbjct: 188 --MWEAFS 193
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257 |
| >gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 46.2 bits (109), Expect = 9e-05
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 18/121 (14%)
Query: 511 ESYDHFDKELAWH---LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 567
E++D D+ L + +Q++ + +IH + +IHRD+ NIF + I +GDFG A
Sbjct: 256 EAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAM 315
Query: 568 FLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFE 627
+ E+ D G VGT +PEI G E D++S G++ +
Sbjct: 316 PFEKEREAFD--------------YGWVGTVATNSPEILAG-DGYCEITDIWSCGLILLD 360
Query: 628 L 628
+
Sbjct: 361 M 361
|
Length = 501 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 1e-04
Identities = 77/320 (24%), Positives = 123/320 (38%), Gaps = 74/320 (23%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 448
LG G FG V+L K K GR+YA+ KI LK + + D EVA L V++ +
Sbjct: 3 LGKGTFGKVILVKEKATGRYYAM-KI-LKKEVIVAKD----EVA--HTLTENRVLQNSRH 54
Query: 449 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQ 508
F T + + T F A+ ++ + ++ E
Sbjct: 55 PFLTALK-------YSFQTHDRLCFVMEYANGGEL----------FFHLSRERV------ 91
Query: 509 VFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAK 567
F ++ A +IV L ++H + +++RDL N+ D IKI DFGL K
Sbjct: 92 -------FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 144
Query: 568 FLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFE 627
E + A T GT Y APE+ + D + LG+V +E
Sbjct: 145 ----EGIKDGATMKT-----------FCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYE 188
Query: 628 LW---HPFSTAMERQ----IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR--- 677
+ PF + I++ +++ L P E +SLL L+ P R
Sbjct: 189 MMCGRLPFYNQDHEKLFELILMEEIRFPRTLSP-------EAKSLLSGLLKKDPKQRLGG 241
Query: 678 --PSATELLQDALPPQMEYE 695
A E++Q + ++
Sbjct: 242 GPDDAKEIMQHKFFAGIVWQ 261
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 1e-04
Identities = 60/254 (23%), Positives = 90/254 (35%), Gaps = 70/254 (27%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN----DRILREVATLSRL 437
DF ++ LG G FG V+L K + I+ +KS + D + E L+ +
Sbjct: 31 DFNFIRTLGTGSFGRVILATYK--NEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI 88
Query: 438 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
H V Y F +S YLY+
Sbjct: 89 NHPFCVNLY--------GSFKDES--------------------------------YLYL 108
Query: 498 QMEYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 556
+E+ F ++ QIV ++ I++RDL P N+ D
Sbjct: 109 VLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDG 168
Query: 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKIDE 614
IK+ DFG AK + DT ++ GT + Y APEI G K
Sbjct: 169 FIKMTDFGFAKVV-------------DTRTYTLCGTPE-----YIAPEILLNVGHGK--- 207
Query: 615 KADMYSLGIVFFEL 628
AD ++LGI +E+
Sbjct: 208 AADWWTLGIFIYEI 221
|
Length = 340 |
| >gnl|CDD|236586 PRK09605, PRK09605, bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Score = 45.6 bits (109), Expect = 1e-04
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 17/88 (19%)
Query: 482 DVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540
DV +E I MEY + L+ V E + EL R++ E +A +H GI
Sbjct: 405 DVDPEEKT-------IVMEYIGGKDLKDVLEG----NPELV----RKVGEIVAKLHKAGI 449
Query: 541 IHRDLTPNNIFFDARNDIKIGDFGLAKF 568
+H DLT +N + + + DFGL K+
Sbjct: 450 VHGDLTTSNFIVR-DDRLYLIDFGLGKY 476
|
Length = 535 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 1e-04
Identities = 46/206 (22%), Positives = 63/206 (30%), Gaps = 69/206 (33%)
Query: 387 QPLGHGGFGHVVLCKN-----------KLDGRH-----YAVKKIRLKDKSLPVNDRILRE 430
+ LG G FG V LC+ + AVK +R D S + L+E
Sbjct: 11 EKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLR-PDASDNAREDFLKE 69
Query: 431 VATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKL 490
V LSRL ++ R L T
Sbjct: 70 VKILSRLSDPNIAR----------------------LLGVCT------------------ 89
Query: 491 ESTYLYIQMEY-CPRTLRQVFESYDHFDKELAW-----------HLFRQIVEGLAHIHGQ 538
L + MEY L Q + + LA ++ QI G+ ++
Sbjct: 90 VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL 149
Query: 539 GIIHRDLTPNNIFFDARNDIKIGDFG 564
+HRDL N IKI DFG
Sbjct: 150 NFVHRDLATRNCLVGKNYTIKIADFG 175
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 1e-04
Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 28/211 (13%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586
QI +G+ ++ + ++HRDL N+ +KI DFGLAK L ++ + + G
Sbjct: 117 QIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADE----KEYHAEGGK 172
Query: 587 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVL 642
V + + A E ++D++S G+ +EL P+ +I
Sbjct: 173 VPIK---------WMALESILHR-IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-- 220
Query: 643 SDLKQKGE-LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL----QDALPPQMEYELL 697
S + +KGE LP + +++ M RP EL+ + A PQ Y ++
Sbjct: 221 SSILEKGERLPQPPICTIDVYMIMVKCWMI-DADSRPKFRELIIEFSKMARDPQ-RYLVI 278
Query: 698 DNILRM-MHSSEDTSIYDKVVSSIFDEETLD 727
RM + S D++ Y ++ ++ +D
Sbjct: 279 QGDERMHLPSPTDSNFYRALMDEEDMDDVVD 309
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 1e-04
Identities = 52/218 (23%), Positives = 82/218 (37%), Gaps = 53/218 (24%)
Query: 374 LPSSRYLNDFEELQPLGHGGFGHVVLCK--------------NKLDGRHY--AVKKIRLK 417
P L F+E LG G FG V LC+ N GR AVK +R
Sbjct: 2 FPRGHLL--FKE--KLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILR-P 56
Query: 418 DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG----VADF--DGDSMWGSGTLASS 471
D + + L+EV LSRL+ +++R + + ++ +GD + L+S
Sbjct: 57 DANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDL---NQFLSSH 113
Query: 472 TFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEG 531
++ + D + L + SY H+ QI G
Sbjct: 114 HLDDKEENGNDAVPPAHCLPAI------------------SY-----SSLLHVALQIASG 150
Query: 532 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 569
+ ++ +HRDL N IKI DFG+++ L
Sbjct: 151 MKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNL 188
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 1e-04
Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 23/161 (14%)
Query: 531 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 590
G+A++ + IHRDL N N +KI DFG+++ D G S
Sbjct: 105 GMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSR-------------QEDDGIYSSS 151
Query: 591 GTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGE 650
G Q+ +TAPE + + ++D++S GI+ LW FS + +++ + + +
Sbjct: 152 GLKQIPIK-WTAPE-ALNYGRYSSESDVWSYGIL---LWETFSLGVCPYPGMTNQQAREQ 206
Query: 651 LPPSWVAKFSEQ-----ESLLRRLMSPSPSDRPSATELLQD 686
+ + ++ +++R P +RP +EL ++
Sbjct: 207 VEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKE 247
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 1e-04
Identities = 45/178 (25%), Positives = 73/178 (41%), Gaps = 42/178 (23%)
Query: 523 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK------FLKLEQLDQ 576
L QI G+ H+ +HRDL N ++ ++K+ L+K + KL
Sbjct: 121 ALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRN--- 177
Query: 577 DAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PF 632
A P + APE Q K+D++S G++ +E++ PF
Sbjct: 178 -ALIPLR----------------WLAPEAVQE-DDFSTKSDVWSFGVLMWEVFTQGELPF 219
Query: 633 STAMERQIVLSDLKQKG-ELPPSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQ 685
+ + VL+ L+ ELP S L +LM + +P DRPS +EL+
Sbjct: 220 YGLSDEE-VLNRLQAGKLELPVP-----EGCPSRLYKLMTRCWAVNPKDRPSFSELVS 271
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 2e-04
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 16/110 (14%)
Query: 524 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTD 583
L Q+ G+ ++ G+ +HRDL N+ ++ KI DFGL+K L + D+ +
Sbjct: 100 LMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGAD----DSYYKAR 155
Query: 584 TGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFS 633
+ G+ +Y APE + K ++D++S GI +W FS
Sbjct: 156 SA-------GKWPLKWY-APECIN-FRKFSSRSDVWSYGIT---MWEAFS 193
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 44.7 bits (105), Expect = 2e-04
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 22/154 (14%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586
+IV L ++H I++RDL N+ D IKI DFGL K E + A T
Sbjct: 103 EIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCK----EGITDAATMKT---- 154
Query: 587 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLS 643
GT Y APE+ + D + LG+V +E+ PF ++
Sbjct: 155 -------FCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 206
Query: 644 DLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677
L + + P + ++ +SLL L+ P+ R
Sbjct: 207 ILMEDIKFPRTLS---ADAKSLLSGLLIKDPNKR 237
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 2e-04
Identities = 43/195 (22%), Positives = 86/195 (44%), Gaps = 23/195 (11%)
Query: 495 LYIQMEYCPR-TLRQVFESYDHFDKELAWHLF-RQIVEGLAHIHGQGIIHRDLTPNNIFF 552
++I ME P LR + + + L+ Q+ LA++ + +HRD+ N+
Sbjct: 81 VWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLV 140
Query: 553 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612
+ + +K+GDFGL+++ L+ ++ + G + + + APE + +
Sbjct: 141 SSPDCVKLGDFGLSRY-----LEDESYYKASKGKLPIK---------WMAPE-SINFRRF 185
Query: 613 DEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRR 668
+D++ G+ +E+ PF ++ V+ ++ GE P SL+ +
Sbjct: 186 TSASDVWMFGVCMWEILMLGVKPFQ-GVKNNDVIGRIEN-GERLPMPPNCPPTLYSLMTK 243
Query: 669 LMSPSPSDRPSATEL 683
+ PS RP TEL
Sbjct: 244 CWAYDPSKRPRFTEL 258
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 43.8 bits (103), Expect = 3e-04
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 22/106 (20%)
Query: 528 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGV 587
+ EG+ ++ + ++HRDL NI K+ DFGLA+ + D +
Sbjct: 109 VAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARV---------GSMGVDNSKL 159
Query: 588 SVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFS 633
V +TAPE + K K+D++S G++ LW FS
Sbjct: 160 PVK---------WTAPEALKH-KKFSSKSDVWSYGVL---LWEVFS 192
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|202547 pfam03129, HGTP_anticodon, Anticodon binding domain | Back alignment and domain information |
|---|
Score = 40.6 bits (96), Expect = 3e-04
Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Query: 1093 VLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDT 1152
V++ L +L EL E I+ + + SL +++ A I +++ +
Sbjct: 3 VVIPLGEKDELEDYAQKLAEELREAGIRVELDDR-NESLGKKFRDADLIGIPFRLVVGEK 61
Query: 1153 GAQKGLVKVRHLDVKKEKEVQRESLVRFLLD 1183
+ G V VR D +++ V E LV L +
Sbjct: 62 ELENGTVTVRDRDTGEKETVSLEELVEKLKE 92
|
This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases it is probably the anticodon binding domain. Length = 93 |
| >gnl|CDD|165211 PHA02882, PHA02882, putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 4e-04
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 494 YLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 553
Y +I +E +++F+ +K+L ++ + ++ L +IH GI H D+ P NI D
Sbjct: 101 YRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVD 160
Query: 554 ARNDIKIGDFGLAKFL 569
N I D+G+A
Sbjct: 161 GNNRGYIIDYGIASHF 176
|
Length = 294 |
| >gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 44.3 bits (104), Expect = 4e-04
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 524 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLA 566
+ RQ++ GL +H GI+HRD+ P N+ +KI DFG A
Sbjct: 314 VMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAA 356
|
Length = 507 |
| >gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 11/77 (14%)
Query: 496 YIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH---GQGIIHRDLTPNNIF 551
Y+ ME+ TL +V +KE + Q+ E LA +H + H DL P NI
Sbjct: 69 YLLMEWIEGETLDEV----SEEEKE---DIAEQLAELLAKLHQLPLLVLCHGDLHPGNIL 121
Query: 552 FDARNDIKIGDFGLAKF 568
D + I D+ A +
Sbjct: 122 VDDGKILGIIDWEYAGY 138
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155 |
| >gnl|CDD|237097 PRK12420, PRK12420, histidyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 6e-04
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 10/132 (7%)
Query: 754 LRDYVVQVTKEMFRQHCAKHLEIEPMYLL-------GDCPQFKRNTVKLLTHGGDLLELS 806
LR+ + + +++F ++ K LE + + G + + L G L L
Sbjct: 20 LRNKIKRALEDVFERYGCKPLETPTLNMYELMSSKYGGGDEILKEIYTLTDQGKRDLALR 79
Query: 807 HELRLPFIRWAISNQ--KSSFKRYEISSVYRRA-IGHSPPNRYLQGDFDIIGGASALTEA 863
++L +PF + N + FKRYEI V+R I ++Q D DI+G S + EA
Sbjct: 80 YDLTIPFAKVVAMNPNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCDVDIVGVESVMAEA 139
Query: 864 EVLKVTMDIVTR 875
E++ + ++ R
Sbjct: 140 ELMSMAFELFRR 151
|
Length = 423 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 7e-04
Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 28/185 (15%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586
Q+ G+ ++ Q IHRDL N+ N +KI DFGLA+ + + D T G
Sbjct: 142 QVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVH----NIDYYKKTTNGR 197
Query: 587 VSVDGTGQVGTYFYTAPEIEQGWPKI-DEKADMYSLGIVFFELWHPFSTAMERQIV--LS 643
+ V + APE + ++ ++D++S G++ +E++ + V L
Sbjct: 198 LPVK---------WMAPEAL--FDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF 246
Query: 644 DLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRM 703
L ++G E ++R PS RP+ +L++D LD +L +
Sbjct: 247 KLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED----------LDRVLTV 296
Query: 704 MHSSE 708
+ E
Sbjct: 297 TSTDE 301
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 7e-04
Identities = 46/206 (22%), Positives = 82/206 (39%), Gaps = 40/206 (19%)
Query: 495 LYIQMEYCP--RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
+YI ME P L + + + + + G+ ++ + IHRDL N
Sbjct: 67 IYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLV 126
Query: 553 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGV--SVDGTGQVGTYFYTAPEIEQGWP 610
N +KI DFG+++ + GG+ DG Q+ +TAPE +
Sbjct: 127 GENNVLKISDFGMSR--------------EEEGGIYTVSDGLKQIPIK-WTAPE-ALNYG 170
Query: 611 KIDEKADMYSLGIVFFELWHPFS------TAMERQIVLSDLKQKGELP-----PSWVAKF 659
+ ++D++S GI+ LW FS M Q ++ +P P + +
Sbjct: 171 RYTSESDVWSYGIL---LWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCPEEIYR- 226
Query: 660 SEQESLLRRLMSPSPSDRPSATELLQ 685
L+ + + P +RPS +E+
Sbjct: 227 -----LMLQCWAYDPENRPSFSEIYN 247
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 0.001
Identities = 53/237 (22%), Positives = 98/237 (41%), Gaps = 51/237 (21%)
Query: 495 LYIQMEYCPR-TLRQVFESYDHFDKELAWHLFR----------------QIVEGLAHIHG 537
LY+ +EY + LR+ + E ++ + R Q+ G+ ++
Sbjct: 96 LYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS 155
Query: 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 597
Q IHRDL N+ N +KI DFGLA+ + + D T G + V
Sbjct: 156 QKCIHRDLAARNVLVTENNVMKIADFGLARDVN----NIDYYKKTTNGRLPVK------- 204
Query: 598 YFYTAPEIEQGWPKI-DEKADMYSLGIVFFELW----HPF-STAMERQIVLSDLKQKGEL 651
+ APE + ++ ++D++S G++ +E++ P+ +E L + +
Sbjct: 205 --WMAPEAL--FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDK 260
Query: 652 PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSE 708
P + +E ++R PS RP+ +L++D LD IL + + E
Sbjct: 261 PANCT---NELYMMMRDCWHAIPSHRPTFKQLVED----------LDRILTLTTNEE 304
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 0.001
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 495 LYIQMEYC-----PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 549
+ + EYC LR+ ES+ + L Q+ +G+A + + IHRDL N
Sbjct: 114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLL--SFSYQVAKGMAFLASKNCIHRDLAARN 171
Query: 550 IFFDARNDIKIGDFGLAK 567
+ +KI DFGLA+
Sbjct: 172 VLLTHGKIVKICDFGLAR 189
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 0.001
Identities = 39/168 (23%), Positives = 70/168 (41%), Gaps = 32/168 (19%)
Query: 526 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLE---QLDQDAAFPT 582
+Q+ G+A++ + +HRDL N +KI DFGL++ + + ++ A P
Sbjct: 137 KQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPI 196
Query: 583 DTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAME----- 637
+ PE + + ++D+++ G+V LW FS M+
Sbjct: 197 R----------------WMPPE-SIFYNRYTTESDVWAYGVV---LWEIFSYGMQPYYGM 236
Query: 638 -RQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATEL 683
+ V+ ++ L P E +L+R S PSDRPS +
Sbjct: 237 AHEEVIYYVRDGNVLSCPDNCP--LELYNLMRLCWSKLPSDRPSFASI 282
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 0.001
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 8/80 (10%)
Query: 496 YIQMEYCPRTLRQVFESYDHFDKELAW--------HLFRQIVEGLAHIHGQGIIHRDLTP 547
Y++M + Q +S D D E +W Q+ +G+ + + IHRD+
Sbjct: 181 YVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAA 240
Query: 548 NNIFFDARNDIKIGDFGLAK 567
N+ KI DFGLA+
Sbjct: 241 RNVLLTDGRVAKICDFGLAR 260
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374 |
| >gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 0.002
Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLE---QLDQDAAFPTD 583
+I G+ H+H +H DL N F + +K+GD+G+ E + + D P
Sbjct: 107 EIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLR 166
Query: 584 TGGVSVDGTGQVGTYFYTAPEI-----------EQGWPKIDEKADMYSLGIVFFELW--- 629
+ APE+ EQ P +++++LG+ +EL+
Sbjct: 167 ----------------WLAPELVGEFHGGLITAEQTKP-----SNVWALGVTLWELFENA 205
Query: 630 -HPFSTAMERQIVLSDLK-QKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATEL 683
P+S +R+++ +K Q+ +L P +SE+ + + SP R +A E+
Sbjct: 206 AQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCWLSPEKRATAEEV 262
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 0.002
Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 34/188 (18%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586
Q+ G+ ++ + IHRDL N+ N +KI DFGLA+ + +D T G
Sbjct: 148 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYKK--TTNGR 203
Query: 587 VSVDGTGQVGTYFYTAPEIEQGWPKI-DEKADMYSLGIVFFELW----HPF-STAMERQI 640
+ V + APE + +I ++D++S G++ +E++ P+ +E
Sbjct: 204 LPVK---------WMAPEAL--FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 252
Query: 641 VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNI 700
L + + P + +E ++R PS RP+ +L++D LD I
Sbjct: 253 KLLKEGHRMDKPSNCT---NELYMMMRDCWHAVPSQRPTFKQLVED----------LDRI 299
Query: 701 LRMMHSSE 708
L + + E
Sbjct: 300 LALTSNQE 307
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.002
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 16/103 (15%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586
+I +G+A++ + +HRDL N +KIGDFG+ + + + D G
Sbjct: 127 EIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDI----YETDYYRKGGKGL 182
Query: 587 VSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFEL 628
+ V + APE ++ G K+D++S G+V +E+
Sbjct: 183 LPVR---------WMAPESLKDG--VFTTKSDVWSFGVVLWEM 214
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 0.003
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 37/175 (21%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586
+I GL H+H IH DL N A +KIGD+GL+ + +D D
Sbjct: 108 EIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHN----KYKEDYYVTPDQLW 163
Query: 587 VSVDGTGQVGTYFYTAPEIEQGWPKIDE------------KADMYSLGIVFFELW----H 630
V + + APE+ +DE +++++SLG+ +EL+
Sbjct: 164 VPLR---------WIAPEL------VDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQ 208
Query: 631 PFSTAMERQIVLSDLK-QKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATEL 683
P+ + Q++ ++ Q+ +LP P S++ + + P RPSA E+
Sbjct: 209 PYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCWLQPEQRPSAEEV 263
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 0.003
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 26/180 (14%)
Query: 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586
Q+ G+ ++ + IHRDL N+ N +KI DFGLA+ + D D T G
Sbjct: 142 QVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVH----DIDYYKKTSNGR 197
Query: 587 VSVDGTGQVGTYFYTAPEIEQGWPKI-DEKADMYSLGIVFFELW----HPF-STAMERQI 640
+ V + APE + ++ ++D++S GI+ +E++ P+ +E
Sbjct: 198 LPVK---------WMAPEAL--FDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELF 246
Query: 641 VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ--DALPPQMEYELLD 698
L + + P + E L+R P+ RP+ +L++ D + + E LD
Sbjct: 247 KLLREGHRMDKPSNCT---HELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVSEEYLD 303
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|226699 COG4248, COG4248, Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 0.003
Identities = 34/146 (23%), Positives = 50/146 (34%), Gaps = 29/146 (19%)
Query: 497 IQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 556
I M Y P T RQ SY H + + R + A +H G + D+ N+
Sbjct: 98 IHMIYSPATRRQ---SYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFL----- 149
Query: 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI---- 612
+ D +D D+ G VG +T PE+ Q P
Sbjct: 150 ---VSDDSKVVL-----VDSDSFQINANG---TLHLCPVGVSEFTPPEL-QTLPSFVGFE 197
Query: 613 -DEKADMYSLGIVFFELW----HPFS 633
D + L ++ F L HP+S
Sbjct: 198 RTANHDNFGLAVLIFHLLFGGRHPYS 223
|
Length = 637 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1196 | |||
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| COG0124 | 429 | HisS Histidyl-tRNA synthetase [Translation, riboso | 100.0 | |
| KOG1936 | 518 | consensus Histidyl-tRNA synthetase [Translation, r | 100.0 | |
| PLN02972 | 763 | Histidyl-tRNA synthetase | 100.0 | |
| PLN02530 | 487 | histidine-tRNA ligase | 100.0 | |
| PRK12420 | 423 | histidyl-tRNA synthetase; Provisional | 100.0 | |
| CHL00201 | 430 | syh histidine-tRNA synthetase; Provisional | 100.0 | |
| PRK12292 | 391 | hisZ ATP phosphoribosyltransferase regulatory subu | 100.0 | |
| PRK12421 | 392 | ATP phosphoribosyltransferase regulatory subunit; | 100.0 | |
| TIGR00442 | 397 | hisS histidyl-tRNA synthetase. This model finds a | 100.0 | |
| PRK00037 | 412 | hisS histidyl-tRNA synthetase; Reviewed | 100.0 | |
| TIGR00443 | 314 | hisZ_biosyn_reg ATP phosphoribosyltransferase, reg | 100.0 | |
| PRK12295 | 373 | hisZ ATP phosphoribosyltransferase regulatory subu | 100.0 | |
| PF13393 | 311 | tRNA-synt_His: Histidyl-tRNA synthetase; PDB: 3HRI | 100.0 | |
| PRK12293 | 281 | hisZ ATP phosphoribosyltransferase regulatory subu | 100.0 | |
| COG3705 | 390 | HisZ ATP phosphoribosyltransferase involved in his | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| cd00773 | 261 | HisRS-like_core Class II Histidinyl-tRNA synthetas | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| TIGR00418 | 563 | thrS threonyl-tRNA synthetase. This model represen | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| PRK12294 | 272 | hisZ ATP phosphoribosyltransferase regulatory subu | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| PRK00413 | 638 | thrS threonyl-tRNA synthetase; Reviewed | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| PRK12305 | 575 | thrS threonyl-tRNA synthetase; Reviewed | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| PRK12444 | 639 | threonyl-tRNA synthetase; Reviewed | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| PRK14799 | 545 | thrS threonyl-tRNA synthetase; Provisional | 100.0 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.98 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.98 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.98 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.98 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.98 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.98 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.98 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.98 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.97 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.97 | |
| PLN02908 | 686 | threonyl-tRNA synthetase | 99.97 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.97 | |
| PRK09194 | 565 | prolyl-tRNA synthetase; Provisional | 99.97 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.97 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.97 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.97 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.97 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.97 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.97 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.97 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.97 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.97 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.96 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.96 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.96 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.96 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.96 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.95 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.95 | |
| PRK12325 | 439 | prolyl-tRNA synthetase; Provisional | 99.95 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.95 | |
| TIGR00409 | 568 | proS_fam_II prolyl-tRNA synthetase, family II. Pro | 99.95 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.94 | |
| PRK04173 | 456 | glycyl-tRNA synthetase; Provisional | 99.94 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.94 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.93 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.93 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.92 | |
| TIGR00408 | 472 | proS_fam_I prolyl-tRNA synthetase, family I. Proly | 99.92 | |
| PLN02837 | 614 | threonine-tRNA ligase | 99.92 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.92 | |
| PRK08661 | 477 | prolyl-tRNA synthetase; Provisional | 99.91 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.9 | |
| PRK03991 | 613 | threonyl-tRNA synthetase; Validated | 99.9 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.89 | |
| COG0441 | 589 | ThrS Threonyl-tRNA synthetase [Translation, riboso | 99.88 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.88 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.86 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.85 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.85 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.84 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.84 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.84 | |
| KOG4018 | 215 | consensus Uncharacterized conserved protein, conta | 99.82 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.82 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.82 | |
| cd00670 | 235 | Gly_His_Pro_Ser_Thr_tRS_core Gly_His_Pro_Ser_Thr_t | 99.82 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.81 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.8 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.78 | |
| cd00771 | 298 | ThrRS_core Threonyl-tRNA synthetase (ThrRS) class | 99.78 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.77 | |
| cd00779 | 255 | ProRS_core_prok Prolyl-tRNA synthetase (ProRS) cla | 99.76 | |
| KOG1637 | 560 | consensus Threonyl-tRNA synthetase [Translation, r | 99.75 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.75 | |
| TIGR00389 | 551 | glyS_dimeric glycyl-tRNA synthetase, dimeric type. | 99.74 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.72 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.69 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.68 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.68 | |
| cd00772 | 264 | ProRS_core Prolyl-tRNA synthetase (ProRS) class II | 99.64 | |
| COG0423 | 558 | GRS1 Glycyl-tRNA synthetase (class II) [Translatio | 99.64 | |
| PLN02734 | 684 | glycyl-tRNA synthetase | 99.64 | |
| cd00774 | 254 | GlyRS-like_core Glycyl-tRNA synthetase (GlyRS)-lik | 99.62 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.62 | |
| PRK14894 | 539 | glycyl-tRNA synthetase; Provisional | 99.61 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.61 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.6 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.57 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.56 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.55 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.55 | |
| TIGR02367 | 453 | PylS pyrrolysyl-tRNA synthetase. PylS is the archa | 99.48 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.46 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.45 | |
| PF00587 | 173 | tRNA-synt_2b: tRNA synthetase class II core domain | 99.45 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.4 | |
| PRK04172 | 489 | pheS phenylalanyl-tRNA synthetase subunit alpha; P | 99.4 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.39 | |
| cd00778 | 261 | ProRS_core_arch_euk Prolyl-tRNA synthetase (ProRS) | 99.36 | |
| PF03129 | 94 | HGTP_anticodon: Anticodon binding domain; InterPro | 99.32 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.28 | |
| COG0442 | 500 | ProS Prolyl-tRNA synthetase [Translation, ribosoma | 99.28 | |
| cd00861 | 94 | ProRS_anticodon_short ProRS Prolyl-anticodon bindi | 99.25 | |
| PRK09537 | 417 | pylS pyrolysyl-tRNA synthetase; Reviewed | 99.23 | |
| cd00860 | 91 | ThrRS_anticodon ThrRS Threonyl-anticodon binding d | 99.23 | |
| cd00858 | 121 | GlyRS_anticodon GlyRS Glycyl-anticodon binding dom | 99.22 | |
| KOG2324 | 457 | consensus Prolyl-tRNA synthetase [Translation, rib | 99.21 | |
| PTZ00326 | 494 | phenylalanyl-tRNA synthetase alpha chain; Provisio | 99.18 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.16 | |
| smart00591 | 107 | RWD domain in RING finger and WD repeat containing | 99.15 | |
| cd00768 | 211 | class_II_aaRS-like_core Class II tRNA amino-acyl s | 99.14 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.13 | |
| cd00862 | 202 | ProRS_anticodon_zinc ProRS Prolyl-anticodon bindin | 99.11 | |
| cd00738 | 94 | HGTP_anticodon HGTP anticodon binding domain, as f | 99.11 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.08 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.08 |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-90 Score=835.83 Aligned_cols=1080 Identities=41% Similarity=0.589 Sum_probs=713.0
Q ss_pred cceeEEEEEeCCCCCCCCCceeeccCCCCCHHHHHHHHHHHHHHHHHhhhCCCeEEEeeHHHHHHHHHhhCCCC------
Q 000993 33 LLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAAQEFLSEIVPLG------ 106 (1196)
Q Consensus 33 ~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~Gm~miftl~~~~~e~l~~~~~~~------ 106 (1196)
.+++.|.++++++||..+|.+++...+|.+++|++-|...|...+++-. ||+|||-|.+.+||+|.+.-+..
T Consensus 49 ~~~~~lh~~~~~~yp~~kp~i~lk~~~~~~d~~i~~L~~~l~~~~~~~~--G~~~i~eLa~~vqefl~~~~~~~~~~~dr 126 (1351)
T KOG1035|consen 49 KLSGRLHVKCKRKYPYSKPEIKLKDHQGVSDEDIELLSNELTALAKTLR--GEVMIAELASIVQEFLKDHQDRPSGFHDR 126 (1351)
T ss_pred HHhhHhhhhhccccCCCCccccccccccchHHHHHHHHHHHHHhhcccc--ccEEeeeHhhhhHHHHhccCCCCCcchHH
Confidence 5788999999999999999999999999999999999999999999999 99999999999999997654411
Q ss_pred --------cc-----ccCCCCccc--------------------ccccccccCccccc----------------------
Q 000993 107 --------QS-----NESVPGLVT--------------------ESSSQSFEGSAVSA---------------------- 131 (1196)
Q Consensus 107 --------~~-----~~~~~~~~~--------------------~~~~~~~~~~~~~~---------------------- 131 (1196)
++ ++...+... +.++.+|-|-.|=.
T Consensus 127 ~~~~~rr~~~~~~~~~q~ele~~~~e~~~~g~p~~~~~~~~t~~e~~~~~~~~~~vy~~ls~~~~~~l~l~k~~~~~qs~ 206 (1351)
T KOG1035|consen 127 MLQDIRRQYSKLMDYEQDELEAREIERCQRGSPRKTMSLQGTREESHGNIFYGKRVYPILSHLTQGTLLLVKWVEQAQSL 206 (1351)
T ss_pred HHHHHHHHHHhhhhhhhccHHHhhhHhhccCCcchhhhhcCCCCCCcccceecceeeeeeccccCceEEEEehhhhHHhh
Confidence 11 011111111 11122222211111
Q ss_pred --------------------------------ccccccCCCeeEEeeeccccCCCccc-----ccccccCCCCcccCCCC
Q 000993 132 --------------------------------SKSCSSKVPFVYGFIDLFSGCGESWH-----WGLGIDENRGVVPSVPS 174 (1196)
Q Consensus 132 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 174 (1196)
..-+-.++.++||+.++|.| |- |=..-.++++.+-+|-+
T Consensus 207 ~~~~~~s~~~~~~~~~k~~i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g----~~~~v~~~~~s~~~~~~~~q~v~~ 282 (1351)
T KOG1035|consen 207 SEPIEISHDYESTPCGKKEIQTTEIELESLSKIAHDNLGGYFVYGLERLFRG----IVLDVLQEICSKVELRSLLQSVGS 282 (1351)
T ss_pred cCcccccCcccCccchHHHHHHHHHHHHHHHhhccccccceeEEeehhhcch----HHHHHHHhhcCccchHHHHhhccc
Confidence 11233467778888888877 31 22233455555555444
Q ss_pred CCCCCCcchhh--hh-hhccCCCcccccCCCCccccccCCcccccc-------ccccC--CCCceeccCCCCCCCchhcc
Q 000993 175 HASDGSNYEVM--WR-KIDKNVKPLMIPDANQGTALIPSAKLDTVK-------EENED--DNRSISTTDSSTSPMEEWVE 242 (1196)
Q Consensus 175 ~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~--~~~~~~~~~~~~~~~~~~~~ 242 (1196)
|.. +.. |. ++. .|++.+-+..++++. +++-+ ++.-+|-+|-..
T Consensus 283 i~~-----~~~r~~~~~~~------------~GL~~~h~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~s-------- 337 (1351)
T KOG1035|consen 283 IPL-----ETLRILHQKLL------------EGLAYLHSLSLEHVVLSASSSKESTVDGEGVVAISLSDFDS-------- 337 (1351)
T ss_pred cCH-----HHHHHHHHHHh------------hhHHHHHHhccceeEEecccccccccCccceeecchhhhcc--------
Confidence 432 221 11 111 233333333444433 11111 111111111110
Q ss_pred cccccccccchhhccCCCCCCCCccccccccccccccCCcccchhhhhHHHHHHHHHHhhcccCCCcccHHHHHHHHHh-
Q 000993 243 NGIKGENRDSLLQDHGSNNDGGDTEIDRLESFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLTDALPQIATELYN- 321 (1196)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~lc~~~~~~~~~~~~~~~~l~~- 321 (1196)
++... ++..+.+.+...-.+.-+.+-+.-......++|+..+++.+.-..+...+.........+-.
T Consensus 338 -----------s~~l~-d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~~~~~~l~~~ 405 (1351)
T KOG1035|consen 338 -----------SKPLP-DNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKSAVPVSLLDVL 405 (1351)
T ss_pred -----------cccCC-CcccchhhcCccccccccccccccchhhhhhHHHHHHHHHhhhhhcCcccccccchhhhhccc
Confidence 11111 11222223222334444444455555556667777777766555555444222111111100
Q ss_pred ----cCCCCccccCcCCCCcccccchhhHHHhh---hhccc--------cccCCcCCCCCCCCCCCCCCCCcccCCceEE
Q 000993 322 ----LGIFSERGRDLASKPSSQFNKTFNQVFHQ---KMVSS--------RVSQFWKPSVDSGSPNMSLPSSRYLNDFEEL 386 (1196)
Q Consensus 322 ----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~s~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 386 (1196)
+......-.......+.....-+...+-. .+.++ ...+.+.+.....++ .....+||+++|+++
T Consensus 406 ~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~s~-~~r~~SRY~~DFEEL 484 (1351)
T KOG1035|consen 406 STSELLDALPKCLDEDSEERLSALELLTHPFLRFPTDNESSEFAPNDETSVPQFRLRFSGAMSP-LQRQFSRYLNDFEEL 484 (1351)
T ss_pred cchhhhhhhhhhcchhhhhccchhhhhhchhcccccccccccccCccccccCccCCCCccccCc-cccchhhHhhhhHHH
Confidence 00000000000000111100000000000 00000 011111111111111 122337999999999
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCc----
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM---- 462 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~---- 462 (1196)
+.||+||||.||+|+++.+|+.||||+|+.+. +......+.+|++.|++|+|||||+||.+|+|.....-..+..
T Consensus 485 ~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~~~ 563 (1351)
T KOG1035|consen 485 ELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVASDS 563 (1351)
T ss_pred HHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccccccch
Confidence 99999999999999999999999999999876 6677788999999999999999999999999965411000000
Q ss_pred --C--C-----------------C-----------Ccccccccc------------------cc------cc--------
Q 000993 463 --W--G-----------------S-----------GTLASSTFS------------------NR------AA-------- 478 (1196)
Q Consensus 463 --~--~-----------------~-----------g~~~~~~~~------------------~~------~~-------- 478 (1196)
| . + +...+..+. ++ +.
T Consensus 564 ~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~d 643 (1351)
T KOG1035|consen 564 ESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVILD 643 (1351)
T ss_pred hhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccccC
Confidence 0 0 0 000000000 00 00
Q ss_pred ---c-cccccccccccc-------ccEEEEEeeecCCCHHHHHhhcCCC--CHHHHHHHHHHHHHHHHHHHhCCCcccCC
Q 000993 479 ---S-SADVTGQENKLE-------STYLYIQMEYCPRTLRQVFESYDHF--DKELAWHLFRQIVEGLAHIHGQGIIHRDL 545 (1196)
Q Consensus 479 ---~-~~~v~~~~~~~~-------~~~l~iVmEy~~gsL~~~l~~~~~l--~e~~~~~i~~qIa~gL~yLHs~gIiHrDL 545 (1196)
. +..+...++..+ ...+||.||||+.++.+.+..++.+ ....+|+++++|++||+|+|++|||||||
T Consensus 644 ~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDL 723 (1351)
T KOG1035|consen 644 DTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDL 723 (1351)
T ss_pred cchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccC
Confidence 0 000011111112 3789999999998766666555555 48899999999999999999999999999
Q ss_pred CcCcEEecCCCCeEEeccCcchhccc--cccccCCC-CCCCCCCccccCcCccccccCCCchhccCCC--CCCCcchhHH
Q 000993 546 TPNNIFFDARNDIKIGDFGLAKFLKL--EQLDQDAA-FPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP--KIDEKADMYS 620 (1196)
Q Consensus 546 Kp~NILld~~~~vKL~DFGlA~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~~s~ksDVwS 620 (1196)
||.||+++++++|||+|||+|+.... ....+... .....+....+.|+.+||.-|+|||++.+.. .|+.|+||||
T Consensus 724 KP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYS 803 (1351)
T KOG1035|consen 724 KPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYS 803 (1351)
T ss_pred CcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHH
Confidence 99999999999999999999997431 11111111 1112333344678899999999999998866 6999999999
Q ss_pred HHHHHHHhhcCCchhHHHHHHHHHhhhcCCCCCc---cccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchHHHH
Q 000993 621 LGIVFFELWHPFSTAMERQIVLSDLKQKGELPPS---WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELL 697 (1196)
Q Consensus 621 lGviLyELltPf~~~~~~~~~~~~l~~~~~~p~~---~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~~~~ 697 (1196)
|||||+||++||.+.|++...+..++ .+.+|.. +.+..+...++|++||++||++||||.++|++.|++....++.
T Consensus 804 LGIVlFEM~yPF~TsMERa~iL~~LR-~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llppe~~el~ 882 (1351)
T KOG1035|consen 804 LGIVLFEMLYPFGTSMERASILTNLR-KGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLPPEESELL 882 (1351)
T ss_pred HHHHHHHHhccCCchHHHHHHHHhcc-cCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCccchHHH
Confidence 99999999999999999999999988 8888877 6777788899999999999999999999999999996433333
Q ss_pred HHHHHhcCCCCCCcchhhhccccccchhhhhhcccccccccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCcccccc
Q 000993 698 DNILRMMHSSEDTSIYDKVVSSIFDEETLDMKHHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIE 777 (1196)
Q Consensus 698 ~~~~~~~~~~~d~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP 777 (1196)
...+......+...+.......++++...+..+..-. +.--.+++.+....+++++...+.++|++||+.++.||
T Consensus 883 -~~~~h~~~~~~~k~~~~~~~~~~~q~~~~~~n~~yd~----~~~~~~~~~~~~~~l~~~v~e~~~~ifr~Hga~~l~tp 957 (1351)
T KOG1035|consen 883 -VFLQHLYIEQLGKAYKNLLQLIFEQEVLEVLNHQYDL----DRLSYIQYTEINNELREYVVEEVVKIFRKHGAIELETP 957 (1351)
T ss_pred -HHHHHHHHHHHHHHHhchhhHHHHHhhhhhhcccccc----ccccccccchhHHHHHHHHHHHHHHHHHHhcceeccCC
Confidence 3333333333444555555556666665554433222 11245788888999999999999999999999999999
Q ss_pred ceeecCCCcccccceEEEeecCCceEeecCCCcHHHHHHHHhCCCCceeEEEecCeeecCCCCCCCcceeEeEEEEeCCC
Q 000993 778 PMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGA 857 (1196)
Q Consensus 778 ~~~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~~~~P~r~~Y~G~VfR~e~~~~~~~ef~Q~GvEiiG~~ 857 (1196)
++.+.....-...+.+.+.|++|-.+.|-.|++.|+||+++.|...-+|+|.++.|||.+... ..++++||+++|||..
T Consensus 958 p~~~~~~~~~~~~~~v~~ld~sG~~v~Lp~DLr~pfar~vs~N~~~~~Kry~i~rVyr~~~~~-hP~~~~ec~fDii~~t 1036 (1351)
T KOG1035|consen 958 PLSLRNACAYFSRKAVELLDHSGDVVELPYDLRLPFARYVSRNSVLSFKRYCISRVYRPAIHN-HPKECLECDFDIIGPT 1036 (1351)
T ss_pred ccccccccchhccceeeeecCCCCEEEeeccccchHHHHhhhchHHHHHHhhhheeecccccC-CCccccceeeeEecCC
Confidence 986665555567788999999999999999999999999999988899999999999997755 7788999999999988
Q ss_pred CccchHHHHHHHHHHHHHcCCCCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHH
Q 000993 858 SALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQL 937 (1196)
Q Consensus 858 ~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~ 937 (1196)
.-..|||+|.+|.+++...--+.++.|.|||..++++++..+|++++++..+..++...-..+.....-...|-.+.+..
T Consensus 1037 ~sl~~AE~L~vi~Ei~~~~l~~~n~~i~lnH~~LL~Ai~~~~~i~~~~r~~v~~~l~~~~~~r~~~~~~~~~~~~~~~~s 1116 (1351)
T KOG1035|consen 1037 TSLTEAELLKVIVEITTEILHEGNCDIHLNHADLLEAILSHCGIPKDQRRKVAELLSDMGSSRPQRSEKELKWVFIRRSS 1116 (1351)
T ss_pred CCccHHHHHHHHHHHHHHHhccCceeEEeChHHHHHHHHHHcCCCHHHHHHHHHHHHHHhhccccHHHHHHHHhhhhHHH
Confidence 77999999999999998853444799999999999999999999999999998888775433211111011111111111
Q ss_pred HHhcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChHHHHHHHHH-----HHHHcCCCceEEEcCCCCCCCCCccc
Q 000993 938 LQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRN 1012 (1196)
Q Consensus 938 ~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgl~YYTG 1012 (1196)
...+.+. ..+........|.. ..+..++..+.....++ +|++| ++..+|+...+.|+.++.+....-.|
T Consensus 1117 ~~~~~l~----~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~vr-~L~eLe~~~~~~~~~~i~~~~~i~~g~~~~~~~~~g 1190 (1351)
T KOG1035|consen 1117 LQLAKLP----EFVLNRLFLVAGRF-QALKLIRGKLRADSLVR-ALKELENVVGLLRSLGIEEHVHIYVGPTESRHRNGG 1190 (1351)
T ss_pred HHhhhhH----HHHHhhhhhhhcch-hhhHHHhhhhhhhHHHH-HHHHHHHHHHHHHHhccccceEEeeccceeEEcCCc
Confidence 1111111 11111111222332 45555555444344445 88888 78889999889999997777777789
Q ss_pred eEEEEEecCCCCccccccccccccccccchhhhhccccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCce
Q 000993 1013 LFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTS 1092 (1196)
Q Consensus 1013 ~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~ 1092 (1196)
++|.+.+..... ..+....++.|||||.++.+|++.. .++ -++|+|... +..+...+..+..+...+..+|
T Consensus 1191 ~~~qi~a~~~~~--~~~~~~~la~GgRyd~~~~~~~~~~---~~~---~p~a~gv~~-~~~~~~~~~~~~~~~~~~~~cd 1261 (1351)
T KOG1035|consen 1191 IQFQITAEIKSN--TSGDPVLLAAGGRYDSLLQEVRDEQ---KMN---LPGAIGVSA-LSTIRQHAPKDLEPIKTPSSCD 1261 (1351)
T ss_pred EEEEEeecccCC--CcCCceeeecccchHHHHHHhhhhh---hhc---Ccccceehh-hHHHHHhhhccccCCCCccccc
Confidence 999998875432 2333346999999999999997732 122 245777652 2222222222333444566899
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEE--cCCCccc
Q 000993 1093 VLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRH--LDVKKEK 1170 (1196)
Q Consensus 1093 vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~--l~~g~q~ 1170 (1196)
|+||..+ ...+..++.++++||..||++++.+.+...+.++-.||+..-|.+++++. +++..||. +....+.
T Consensus 1262 vlics~g-~~l~t~~~~l~~~LWs~gI~a~i~~~~s~~~~e~~e~~~~~~i~~iliv~-----n~~~~vks~~~e~~se~ 1335 (1351)
T KOG1035|consen 1262 VLICSRG-SGLLTQRMELVAKLWSKGIKAEIVPDPSPSLEELTEYANEHEITCILIVT-----NQKEKVKSFELERKSEK 1335 (1351)
T ss_pred EEEEecC-CchHHHHHHHHHHHHHcCcccceeeCCCcchHHHHHHHhcCceEEEEEEe-----cceeeechhHHhhhhhh
Confidence 9999997 77889999999999999999999999888999999999988888888876 45555554 4444566
Q ss_pred ccchHHHHHHHHHHH
Q 000993 1171 EVQRESLVRFLLDAI 1185 (1196)
Q Consensus 1171 ~v~~~el~~~l~~~l 1185 (1196)
.+-..+|++++.+.+
T Consensus 1336 ~~~~~elv~f~~~~~ 1350 (1351)
T KOG1035|consen 1336 VVGRTELVEFLLQAL 1350 (1351)
T ss_pred hhhHHHHHHHHHHhh
Confidence 677788888876653
|
|
| >COG0124 HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-75 Score=671.01 Aligned_cols=408 Identities=21% Similarity=0.294 Sum_probs=350.3
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-Ccc---cccceEEEeecCCceEeecCCCc
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQ---FKRNTVKLLTHGGDLLELSHELR 810 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~---~~~~my~f~D~~G~~laLRPD~T 810 (1196)
+.|+|++|++|.++..+++|++.++++|++|||.+|.||+| ++.++ |+. ..++||.|.|++||.++||||+|
T Consensus 5 ~~prG~~D~lp~d~~~~~~i~~~~~~v~~~yGf~eI~TPifE~telf~r~~Ge~td~v~kemY~F~Dkggr~laLRpe~T 84 (429)
T COG0124 5 QRPRGTRDFLPEDMALREYIESTIRKVFESYGFSEIRTPIFEYTELFARKSGEETDVVEKEMYTFKDKGGRSLALRPELT 84 (429)
T ss_pred cCCCCccccChHHHHHHHHHHHHHHHHHHHcCCEeccCccccchhHhhhccCCcccccccceEEEEeCCCCEEEecccCc
Confidence 45899999999999999999999999999999999999999 44444 665 57999999999999999999999
Q ss_pred HHHHHHHHhCCC---CceeEEEecCeeecCCCCCCCcc-eeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEe
Q 000993 811 LPFIRWAISNQK---SSFKRYEISSVYRRAIGHSPPNR-YLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHL 886 (1196)
Q Consensus 811 ~~iaR~~a~~~~---~P~r~~Y~G~VfR~e~~~~~~~e-f~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~L 886 (1196)
+|+||++++|.. .|+|+||+|+|||||+||.||+| |+|+|+|+||.+++.+|||||+|+.++|++||+.+ ++|+|
T Consensus 85 apv~R~~~en~~~~~~p~k~yy~g~vfRyErPQ~GR~RqF~Q~g~E~iG~~~~~~DAEvi~l~~~~l~~lGi~~-~~l~i 163 (429)
T COG0124 85 APVARAVAENKLDLPKPLKLYYFGPVFRYERPQKGRYRQFYQFGVEVIGSDSPDADAEVIALAVEILEALGIGG-FTLEI 163 (429)
T ss_pred HHHHHHHHhccccccCCeeEEEecceecCCCCCCCCceeeEEcCeEEeCCCCcccCHHHHHHHHHHHHHcCCCc-EEEEE
Confidence 999999998753 59999999999999999988876 99999999999999999999999999999999997 99999
Q ss_pred CcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHH
Q 000993 887 NHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQAL 966 (1196)
Q Consensus 887 g~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l 966 (1196)
||+++++++++.+|+ +.++.+.++|+++++. + +..+.+........+.+..|. ...+...+++
T Consensus 164 N~~g~l~~~~~~~gi--~~~~~l~~~ldk~~k~-------------~-~~~L~e~~~~r~~~n~lr~ld-~k~~~~~~~~ 226 (429)
T COG0124 164 NSRGILEGRLEYLGI--DQREALLRYLDKLDKI-------------G-KLELDEDSKRRLKTNPLRVLD-SKKDSDQELL 226 (429)
T ss_pred cCcccHHHHHHhhcc--hhHHHHHHHHhhhhhH-------------H-HHHhhhhhhhhhhhchHHHHH-hccchHHHHH
Confidence 999999999999999 7788999999987732 1 122222333333455555554 2334445556
Q ss_pred HHHhccCCC-ChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchh
Q 000993 967 PRLRGALPA-DKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1043 (1196)
Q Consensus 967 ~~l~~~~~~-~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L 1043 (1196)
+.+..++.. +....+.++++ +|.++|+ .+.+|++++||||||||+|||++..+.+ .+++||||||||+|
T Consensus 227 ~~ap~i~~~~~~e~~~~~~~v~~~L~~~g~--~~~id~~lvRGLDYYtg~VFE~~~~~~~------~~~sI~gGGRYD~L 298 (429)
T COG0124 227 KNAPELLDYLDEESLEHLEELLALLDALGI--SYEIDPSLVRGLDYYTGTVFEAVTDGLG------AQGSVCGGGRYDGL 298 (429)
T ss_pred hccHHhhhhccHHHHHHHHHHHHHHHHcCC--CEEEccceecchhhccceEEEEEEcCCc------cccceecCccchHH
Confidence 666555542 33567777777 8999995 4999999999999999999999998644 35789999999999
Q ss_pred hhhccccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEE
Q 000993 1044 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQF 1123 (1196)
Q Consensus 1044 ~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel 1123 (1196)
++.||++ ++||||||+|+|||+.+|...........+++|+|++.+ ++...+|+.+|++||++|++|++
T Consensus 299 v~~~gG~----------~~pavGFaiGveRl~~~l~~~~~~~~~~~~~~v~v~~~~-~~~~~~a~~la~~LR~~g~~~~~ 367 (429)
T COG0124 299 VEEFGGK----------PTPAVGFAIGVERLILALEEEGKEDPVETRVDVYVVPLG-EDAEPEALKLAQKLRAAGISVEV 367 (429)
T ss_pred HHHhCCC----------CCCceeEehHHHHHHHHHHHcCCCCCcCCCCCEEEEEcC-chhHHHHHHHHHHHHHcCCcEEE
Confidence 9999875 579999999999999998854333334678899999997 55568999999999999999999
Q ss_pred eeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHH
Q 000993 1124 VPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDA 1184 (1196)
Q Consensus 1124 ~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~ 1184 (1196)
++. .+++++|++||++.|++++||+|++|+++|+|+||||.+|+|..++++++++.++..
T Consensus 368 ~~~-~r~~k~q~k~A~~~g~~~~viiGe~E~~~g~v~vKdl~t~eq~~v~~~~~~~~~~~~ 427 (429)
T COG0124 368 DYS-GRKLKKQFKYADKLGARFAVILGEDELANGVVTVKDLATGEQEEVPLDELVEELKEL 427 (429)
T ss_pred Eec-cccHHHHHHHHHHCCCCEEEEEcchHHhcCCEEEeeCCCCccceecHHHHHHHHHhh
Confidence 888 677999999999999999999999999999999999999999999999999988765
|
|
| >KOG1936 consensus Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-73 Score=628.40 Aligned_cols=429 Identities=27% Similarity=0.448 Sum_probs=384.3
Q ss_pred ccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCCCcccccceEEEeecCCceEeecCCCcHH
Q 000993 737 LNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLP 812 (1196)
Q Consensus 737 ~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ 812 (1196)
.-+.|+|++||.|.++.++++|.+.+.++|++||++.|+||+| ++.++..+..+.+|.|.|++|+.++||||+|+|
T Consensus 59 ~lKtPKGTrD~~p~qm~lRe~if~~i~~vFkrhGa~~iDTPVFElkeiL~gKYGEdskLiYdlkDQGGEl~SLRYDLTVP 138 (518)
T KOG1936|consen 59 SLKTPKGTRDFSPEQMALREKIFSTIKEVFKRHGAETIDTPVFELKEILTGKYGEDSKLIYDLKDQGGELCSLRYDLTVP 138 (518)
T ss_pred eecCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCeeccccchhHHHHHhhhcccccceeEehhhcCCcEEEeecccccH
Confidence 4478999999999999999999999999999999999999999 777884444599999999999999999999999
Q ss_pred HHHHHHhCCCCceeEEEecCeeecCCC---CCCCcceeEeEEEEeCCCC-ccchHHHHHHHHHHHHHcCCCCceEEEeCc
Q 000993 813 FIRWAISNQKSSFKRYEISSVYRRAIG---HSPPNRYLQGDFDIIGGAS-ALTEAEVLKVTMDIVTRFFHAESCDIHLNH 888 (1196)
Q Consensus 813 iaR~~a~~~~~P~r~~Y~G~VfR~e~~---~~~~~ef~Q~GvEiiG~~~-~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~ 888 (1196)
+||++|+|+...+|+|++++|||+++| ++|+|||+||+++|.|.-+ ..+|+|+|.++.++|+.|||.+ |.|++||
T Consensus 139 fARylAmNki~sikRy~iAkVyRRd~P~mtrGR~REFYQcDFDIAG~~d~M~pdaE~lkiv~e~L~~l~Igd-~~iKvNh 217 (518)
T KOG1936|consen 139 FARYLAMNKITSIKRYHIAKVYRRDQPAMTRGRYREFYQCDFDIAGQFDPMIPDAECLKIVVEILSRLGIGD-YGIKVNH 217 (518)
T ss_pred HHHHHHHcccccceeeeEEEEEeccCchhhchhhhhhhccCccccccCCCCCchHHHHHHHHHHHhhcCccc-eEEEecH
Confidence 999999998889999999999999887 3566679999999999554 5899999999999999999985 9999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHH
Q 000993 889 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 968 (1196)
Q Consensus 889 ~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 968 (1196)
+++++++++.+|+|++.-+.++..++++| |.+|++|++|+..++|++++.++.+..++ .+.|. .+.+++
T Consensus 218 RkiLdgmf~v~GVp~~~frtICSsIDKLd---------K~pwedVkkEmv~eKGlsee~ad~igeyv-~~~g~-~eL~e~ 286 (518)
T KOG1936|consen 218 RKILDGMFAVCGVPEDKFRTICSSIDKLD---------KMPWEDVKKEMVFEKGLSEEAADRIGEYV-SLKGL-DELLEK 286 (518)
T ss_pred HHHHHHHHHHhCCCHHHhhhHHHhhhhhh---------cCCHHHHHHHHHHhcCCCHHHHHHHHHHh-hhccH-HHHHHH
Confidence 99999999999999999999999999988 78999999999999999999999999999 56666 666777
Q ss_pred Hhc--cCCCChHHHHHHHHH-----HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCC--CCc---------ccccc
Q 000993 969 LRG--ALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKE--KYP---------ATLVE 1030 (1196)
Q Consensus 969 l~~--~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~--~~~---------~~~~~ 1030 (1196)
+.. .+..|+...+++++| +++.+|+.++|.||+|++||||||||+|||++..+. ..| ...+.
T Consensus 287 l~~d~~l~~n~~a~eal~dlk~Lf~y~~~fg~s~~isfDlSLARGLDYYTGvIyEav~~~~~~~~~a~~~~~~~~~e~~~ 366 (518)
T KOG1936|consen 287 LIADPKLSQNEAAKEALADLKQLFEYLEIFGISERISFDLSLARGLDYYTGVIYEAVLRGLRLICPAGRYDQAGSTEPGG 366 (518)
T ss_pred HhcCCcccccHHHHHHHHHHHHHHHHHHHcCCcceEEeehHHhccchhhhceeeeeeeccccccCcchhhhccccccCCC
Confidence 764 356788888998888 889999999999999999999999999999998651 111 12234
Q ss_pred ccccccccccchhhhhccccccccccCCCCCCCcceecccHHHHHhhccCCCC---CCCCCCCceEEEEEcCCCchHHHH
Q 000993 1031 GTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFK---PVRNEAGTSVLVCSRGGGGLLVER 1107 (1196)
Q Consensus 1031 ~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~---~~~~~~~~~vlv~~~~~~~~~~~a 1107 (1196)
.++||+|||||+|+++|+.. +..+|+||+++|++||+.+|++... .......++|+|.... ...+.++
T Consensus 367 vGSvaaGGRYDnLv~mf~~k--------~~~vPcvG~S~GVeRiFsile~r~~~~~~~iR~t~t~V~V~~~~-k~~l~eR 437 (518)
T KOG1936|consen 367 VGSVAAGGRYDNLVGMFDKK--------GDKVPCVGQSVGVERIFSILEQRAATVATKIRTTETQVYVAAAG-KNLLFER 437 (518)
T ss_pred ccccccCcchhhHHHHhccc--------cCcCCccceeehHhHHHHHHHHHHHhhhhccccCceEEEEEecC-CchHHHH
Confidence 57899999999999998642 3468999999999999999874322 2234678899998886 7789999
Q ss_pred HHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 000993 1108 MELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1186 (1196)
Q Consensus 1108 ~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~ 1186 (1196)
+++.+.||..||.+|+.++.++++.+|+.||.+.|||++|++|++|+++|.|+||++.+++.+.+++++++..|+++++
T Consensus 438 ~k~v~~Lw~agI~aE~~yk~~~~~~~q~~~~e~~~ip~~vi~Ge~El~~G~V~vk~~~~re~~~v~~e~~v~~l~~~l~ 516 (518)
T KOG1936|consen 438 LKVVNALWDAGIKAEYLYKANPKLLKQFQYAEEAGIPLAVILGEEELADGSVKVKNVGTREEVLVKREQFVSELKDLLS 516 (518)
T ss_pred HHHHHHHHhcCcchhhhhhcCccHHHHHHHHHhcCCCeEEEechhhhcCCeEEEEecccccceeccHHHHHHHHHHHhc
Confidence 9999999999999999998889999999999999999999999999999999999999999999999999999998864
|
|
| >PLN02972 Histidyl-tRNA synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-72 Score=677.14 Aligned_cols=418 Identities=25% Similarity=0.403 Sum_probs=368.2
Q ss_pred ccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-CcccccceEEEeecCCceEeecCCCcH
Q 000993 737 LNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRL 811 (1196)
Q Consensus 737 ~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~ 811 (1196)
+.+.|+|++|++|.++..+++|++.++++|++|||++|+||+| .+.++ +++ .++||+|.|++|+.++||||+|+
T Consensus 326 ~~k~PkGtrD~lP~e~~~re~I~~~L~~vFk~hGy~eI~TPvfE~~Ell~~k~Ged-~k~mY~f~D~gGr~LaLRPDlTv 404 (763)
T PLN02972 326 LPKIPKGTRDFAKEQMAIREKAFSIITSVFKRHGATALDTPVFELRETLMGKYGED-SKLIYDLADQGGELCSLRYDLTV 404 (763)
T ss_pred ccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCEEccCCcccchHHhhcccCcc-hhheEEEECCCCCEEEeCCCChH
Confidence 4488999999999999999999999999999999999999999 34444 444 57899999999999999999999
Q ss_pred HHHHHHHhCCCCceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCC-CccchHHHHHHHHHHHHHcCCCCceEEEeCcH
Q 000993 812 PFIRWAISNQKSSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGA-SALTEAEVLKVTMDIVTRFFHAESCDIHLNHG 889 (1196)
Q Consensus 812 ~iaR~~a~~~~~P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~-~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~~ 889 (1196)
||||++++|...|+|+||+|+|||+++|+++|+ ||+|+|+||||.. +..+|+|||.+++++|+.||+.+ ++|+|||+
T Consensus 405 PiAR~vA~n~~~p~KrYyiG~VFR~e~pqkGR~REF~Q~G~EIIG~~~~~~aDAEVI~La~E~L~~LGi~d-f~I~INh~ 483 (763)
T PLN02972 405 PFARYVAMNGITSFKRYQIAKVYRRDNPSKGRYREFYQCDFDIAGVYEPMGPDFEIIKVLTELLDELDIGT-YEVKLNHR 483 (763)
T ss_pred HHHHHHHhCCCCcceEEEeccEEecCCCCCCCCccceEEeEEEEcCCCcchhhHHHHHHHHHHHHhCCCCc-eEEEeCCH
Confidence 999999998777999999999999999987766 5999999999974 45789999999999999999986 99999999
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHHH
Q 000993 890 DLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRL 969 (1196)
Q Consensus 890 ~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l 969 (1196)
++++++++.+|++++..+.++.++++++ +.++++++++++...+++++.++.+..++ .+.|++.++++++
T Consensus 484 ~iL~~ILe~lgi~~e~~~~v~~aIdkld---------k~~le~vk~eL~~~~gLs~e~~~~L~~L~-~L~G~~~evLd~L 553 (763)
T PLN02972 484 KLLDGMLEICGVPPEKFRTICSSIDKLD---------KQSFEQVKKEMVEEKGLSNETADKIGNFV-KERGPPLELLSKL 553 (763)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhh---------hhhHHHHHHHHhhhcCCCHHHHHHHHHHH-HhcCCHHHHHHHH
Confidence 9999999999999998899999999887 56788888899888899999999999998 6888878888888
Q ss_pred hcc---CCCChHHHHHHHHH-----HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccc
Q 000993 970 RGA---LPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD 1041 (1196)
Q Consensus 970 ~~~---~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD 1041 (1196)
+.. +..++...+++++| ++..+|+.++|.||++++||++||||+|||+|..+.+ .++||+|||||
T Consensus 554 ~~~~~~l~~~~~~~~aL~eL~~L~~~L~~~gv~~~I~fDlsLvRGLDYYTGiVFE~~~~g~~-------~gsIagGGRYD 626 (763)
T PLN02972 554 RQEGSEFLGNASSRAALDELEIMFKALEKSKAIGKIVFDLSLARGLDYYTGVIYEAVFKGAQ-------VGSIAAGGRYD 626 (763)
T ss_pred HHhhHhhccChHHHHHHHHHHHHHHHHHhcCCCccEEECCcccCCCcccCceEEEEEEcCCc-------cceeeecCCch
Confidence 753 34566677777777 7788898888999999999999999999999987532 24799999999
Q ss_pred hhhhhccccccccccCCCCCCCcceecccHHHHHhhccCCCC-C--CCCCCCceEEEEEcCCCchHHHHHHHHHHHHHcC
Q 000993 1042 YLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFK-P--VRNEAGTSVLVCSRGGGGLLVERMELVAELWEEN 1118 (1196)
Q Consensus 1042 ~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~-~--~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~G 1118 (1196)
+|+++||++ ++||||||||+|||+.+|.+... . ...+.+++|+|++.+ ++.+.++++++++||++|
T Consensus 627 ~Lv~~FgG~----------~vPAVGFSiGIERL~~~L~~~~~~~~~~~~~~~~dVlV~s~g-~~~l~~alkia~~LR~aG 695 (763)
T PLN02972 627 NLVGMFSGK----------QVPAVGVSLGIERVFAIMEQQEEEKSQVIRPTETEVLVSIIG-DDKLALAAELVSELWNAG 695 (763)
T ss_pred hHHHhcCCC----------CCCEEEEEecHHHHHHHHHHcccCCCCCCCCCCCcEEEEEeC-HHHHHHHHHHHHHHHHCC
Confidence 999999653 57999999999999988863221 1 123355789999985 667889999999999999
Q ss_pred CeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 000993 1119 IKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1186 (1196)
Q Consensus 1119 i~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~ 1186 (1196)
|+|++.. .++++++++||++.|++++||+|++|+++|+|+||||.+++|..+++++++++|++++.
T Consensus 696 I~aE~~~--~~kl~kq~~~A~k~gi~~vVIIGe~E~~~g~VkVKnL~tgeq~~V~~delv~~l~~~l~ 761 (763)
T PLN02972 696 IKAEYKV--STRKAKHLKRAKESGIPWMVLVGEKELSKGFVKLKNLEAGVEEEVDRTCFVQELKAELL 761 (763)
T ss_pred CEEEEeC--CCCHHHHHHHHHHCCCCEEEEECchHHhCCeEEEEECCCCcceEeeHHHHHHHHHHHhc
Confidence 9999644 46899999999999999999999999999999999999999999999999999988774
|
|
| >PLN02530 histidine-tRNA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-67 Score=634.92 Aligned_cols=404 Identities=19% Similarity=0.232 Sum_probs=346.0
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-CcccccceEEEeecCCceEeecCCCcHHH
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPF 813 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~i 813 (1196)
..|+|++|++|.++.+++++++.++++|++|||++|.||+| ++... |++..++||+|.|++|+.++||||+|+|+
T Consensus 71 ~~p~G~~D~lp~~~~~~~~i~~~~~~~~~~~Gy~~I~tP~lE~~el~~~~~g~~~~~~~y~f~D~~g~~l~LRpD~T~~i 150 (487)
T PLN02530 71 NPPKGTRDFPPEDMRLRNWLFDHFREVSRLFGFEEVDAPVLESEELYIRKAGEEITDQLYNFEDKGGRRVALRPELTPSL 150 (487)
T ss_pred CCCCCcCcCCHHHHHHHHHHHHHHHHHHHHcCCEeccccccchHHHhccccCcccccceEEEECCCCCEEecCCCCcHHH
Confidence 57999999999999999999999999999999999999999 44444 77788999999999999999999999999
Q ss_pred HHHHHhCC---CCceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCC-ceEEEeCc
Q 000993 814 IRWAISNQ---KSSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAE-SCDIHLNH 888 (1196)
Q Consensus 814 aR~~a~~~---~~P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~-~~~i~Lg~ 888 (1196)
||+++++. ..|+|+||+|+|||++++|.++. ||+|+|+|+||.+++.+|+|||++++++|+.||+++ +++|+|||
T Consensus 151 aR~~~~~~~~~~~P~r~~y~g~vfR~e~~q~gr~REf~Q~giEiiG~~~~~aDaEvi~l~~~~l~~lgl~~~~~~i~i~~ 230 (487)
T PLN02530 151 ARLVLQKGKSLSLPLKWFAIGQCWRYERMTRGRRREHYQWNMDIIGVPGVEAEAELLAAIVTFFKRVGITSSDVGIKVSS 230 (487)
T ss_pred HHHHHhcccccCCCeEEEEEcCEEcCcCCCCCCccceEEcCeeEeCCCCcchhHHHHHHHHHHHHHcCCCCCceEEEEcC
Confidence 99999864 36999999999999999887765 699999999999999999999999999999999972 49999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHH
Q 000993 889 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 968 (1196)
Q Consensus 889 ~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 968 (1196)
+++++++++.++++++.+..++.++++++ +.+.+++++. +...+++.+.++.+..++. +. .+++
T Consensus 231 ~~i~~~~l~~~~~~~~~~~~v~~~~d~l~---------k~~~~~l~~~-L~~~~~~~~~~~~l~~l~~-~~-----~~~~ 294 (487)
T PLN02530 231 RKVLQAVLKSYGIPEESFAPVCVIVDKLE---------KLPREEIEKE-LDTLGVSEEAIEGILDVLS-LK-----SLDD 294 (487)
T ss_pred HHHHHHHHHHcCCchhhHHHHHHHHHhhh---------hccHHHHHHH-HHHcCCCHHHHHHHHHHHh-cc-----CHHH
Confidence 99999999999999988888888888876 4455666555 5668899888888888773 22 3445
Q ss_pred HhccCCCChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchhhhh
Q 000993 969 LRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHR 1046 (1196)
Q Consensus 969 l~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~ 1046 (1196)
+.+.+.......+.|+++ +++.+|+.+++.||++++||++||||+|||+|.... ..++||+|||||+|++.
T Consensus 295 l~~~~~~~~~~l~~L~~l~~~l~~~g~~~~i~~Dl~lvrgldYYTGivFe~~~~~~-------~~~~I~gGGRYD~Li~~ 367 (487)
T PLN02530 295 LEALLGADSEAVADLKQLFSLAEAYGYQDWLVFDASVVRGLAYYTGIVFEGFDRAG-------KLRAICGGGRYDRLLST 367 (487)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHcCCCccEEEecccccCccccCceEEEEEecCC-------CcceeeecccHHHHHHH
Confidence 555443223345555555 888899988899999999999999999999998421 13479999999999999
Q ss_pred ccccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEEeeC
Q 000993 1047 MWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPV 1126 (1196)
Q Consensus 1047 fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel~~~ 1126 (1196)
||++ ++||||||+|++||+.+|.+.........+.+|+|++.+ ++...+|++++++||++|++|+++..
T Consensus 368 fgg~----------~~pAvGFa~g~~~l~~~l~~~g~~p~~~~~~dVlVi~~~-~~~~~~A~~ia~~LR~~Gi~vevd~~ 436 (487)
T PLN02530 368 FGGE----------DTPACGFGFGDAVIVELLKEKGLLPELPHQVDDVVFALD-EDLQGAAAGVASRLREKGRSVDLVLE 436 (487)
T ss_pred hCCC----------CCCeeEEEEhHHHHHHHHHhcCCCCCCCCCCcEEEEEcC-hHHHHHHHHHHHHHHHCCCeEEEecC
Confidence 9754 479999999999998887643222223356789999985 66788999999999999999998887
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHH
Q 000993 1127 PDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESL 1177 (1196)
Q Consensus 1127 ~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el 1177 (1196)
.++++++++||++.|+++++++|++|.++++|+||||.+|+|..++++++
T Consensus 437 -~~~l~k~ik~A~k~g~~~iviiG~~E~~~~~V~vK~l~sgeq~~v~~~el 486 (487)
T PLN02530 437 -PKKLKWVFKHAERIGAKRLVLVGASEWERGMVRVKDLSSGEQTEVKLDEL 486 (487)
T ss_pred -CCCHHHHHHHHHHCCCCEEEEEchhHHhCCeEEEEECCCCcceEechHHc
Confidence 56899999999999999999999999999999999999999999988775
|
|
| >PRK12420 histidyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-65 Score=607.00 Aligned_cols=402 Identities=21% Similarity=0.340 Sum_probs=342.6
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecC---CCcccccceEEEeecCCceEeecCCCcH
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG---DCPQFKRNTVKLLTHGGDLLELSHELRL 811 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~---~~~~~~~~my~f~D~~G~~laLRPD~T~ 811 (1196)
+.|+|++|++|.++.+++++++.++++|++|||++|.||+| ++.. .+++..++||+|.|++|+.|+||||+|+
T Consensus 5 ~~p~G~~d~~p~~~~~~~~i~~~l~~~f~~~Gy~~i~tP~lE~~~~~~~~~~~~~~~~~~~~~~~D~~g~~l~LRpD~T~ 84 (423)
T PRK12420 5 RNVKGTKDYLPEEQVLRNKIKRALEDVFERYGCKPLETPTLNMYELMSSKYGGGDEILKEIYTLTDQGKRDLALRYDLTI 84 (423)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCEeccccccchHHHHhcccCCCcccccceEEEecCCCceecccccccH
Confidence 46899999999999999999999999999999999999999 3333 2466778999999999999999999999
Q ss_pred HHHHHHHhCC--CCceeEEEecCeeecCCCCCCC-cceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEeCc
Q 000993 812 PFIRWAISNQ--KSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNH 888 (1196)
Q Consensus 812 ~iaR~~a~~~--~~P~r~~Y~G~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~ 888 (1196)
||||+++++. ..|+|+||+|+|||+++++.++ +||+|+|+|+||.+++.+|+|||++|+++|+.||+ + ++|+|||
T Consensus 85 ~iaR~va~~~~~~~p~r~~y~g~vfR~~~~~~gr~rE~~Q~g~EiiG~~~~~adaEvi~la~~~l~~lg~-~-~~i~l~~ 162 (423)
T PRK12420 85 PFAKVVAMNPNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCDVDIVGVESVMAEAELMSMAFELFRRLNL-E-VTIQYNN 162 (423)
T ss_pred HHHHHHHhCcCCCCCeeEEEEcceECCCCCCCCccceeEECCeeeECCCCCcccHHHHHHHHHHHHHCCC-C-EEEEEcC
Confidence 9999999864 4599999999999998877555 46999999999999999999999999999999999 4 9999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHH
Q 000993 889 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 968 (1196)
Q Consensus 889 ~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 968 (1196)
+++++++++.+|++++.++.+..+++.++ +.+++++++.+ .+.+++.+.++.+..|+ .+++. ..++.
T Consensus 163 ~~l~~~il~~~~~~~~~~~~~~~~ld~~~---------~~~~~~~~~~l-~~~~l~~~~~~~l~~l~-~~~~~--~~~~~ 229 (423)
T PRK12420 163 RKLLNGILQAIGIPTELTSDVILSLDKIE---------KIGIDGVRKDL-LERGISEEMADTICNTV-LSCLQ--LSIAD 229 (423)
T ss_pred HHHHHHHHHHcCCChhhhhchhhheechh---------hcCHHHHHHHH-HHcCCCHHHHHHHHHHH-hccCh--hhHHH
Confidence 99999999999999988888877666655 44566665554 45789999999999998 45543 45666
Q ss_pred HhccCCCChHHHHHHHHH-----HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchh
Q 000993 969 LRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1043 (1196)
Q Consensus 969 l~~~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L 1043 (1196)
++..+ .++.+.+++++| .++.+|+..++.||++++|+++||||+|||+|..+.+. ..+||+|||||+|
T Consensus 230 ~~~~~-~~~~~~~~l~~l~~l~~~l~~~g~~~~i~~Dl~~vr~l~YYtG~vFe~~~~~~~~------~~~i~~GGRYD~L 302 (423)
T PRK12420 230 FKEAF-NNPLVAEGVNELQQLQQYLIALGINENCIFNPFLARGLTMYTGTVYEIFLKDGSI------TSSIGSGGRYDNI 302 (423)
T ss_pred HHHhc-cCHHHHHHHHHHHHHHHHHHHhCCCCcEEEeccccCCCcccceeEEEEEecCCCc------cccccCCccHHHH
Confidence 66533 355566666666 78888998889999999999999999999999876321 2369999999999
Q ss_pred hhhccccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHH-cCCeEE
Q 000993 1044 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWE-ENIKAQ 1122 (1196)
Q Consensus 1044 ~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~-~Gi~ve 1122 (1196)
+++||+. +.++||||||+++|||+.+|..... ...+.+|+|++.+ + ...|++++++||+ .|++|+
T Consensus 303 ~~~f~~~--------~~~~pAvGfa~~~~~l~~~l~~~~~---~~~~~dvlI~~~~-~--~~~a~~ia~~Lr~~~Gi~ve 368 (423)
T PRK12420 303 IGAFRGD--------DMNYPTVGISFGLDVIYTALSQKET---ISSTADVFIIPLG-T--ELQCLQIAQQLRSTTGLKVE 368 (423)
T ss_pred HHHhCCC--------CCCCCceeEEEcHHHHHHHHHhcCC---CCCCceEEEEEcC-C--HHHHHHHHHHHHhhcCCeEE
Confidence 9999652 1357999999999999988763221 2246799999974 3 3579999999999 999999
Q ss_pred EeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHH
Q 000993 1123 FVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESL 1177 (1196)
Q Consensus 1123 l~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el 1177 (1196)
++.. .+++++++++|++.|+++++++|++|.++++|+||++.+++|..++++++
T Consensus 369 ~~~~-~~~l~~~i~~A~~~g~~~iviig~~e~~~~~v~vr~~~~~~~~~v~~~~~ 422 (423)
T PRK12420 369 LELA-GRKLKKALNYANKENIPYVLIIGEEEVSTGTVMLRNMKEGSEVKVPLSSL 422 (423)
T ss_pred EecC-CcCHHHHHHHHHHcCCCEEEEEChhHHhcCeEEEEECCCCceeeeeHHHc
Confidence 8887 57999999999999999999999999999999999999999999998875
|
|
| >CHL00201 syh histidine-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-63 Score=589.95 Aligned_cols=402 Identities=15% Similarity=0.164 Sum_probs=313.0
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-Ccc---cccceEEEeecCCceEeecCCCc
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQ---FKRNTVKLLTHGGDLLELSHELR 810 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~---~~~~my~f~D~~G~~laLRPD~T 810 (1196)
+.|+|++|++|.++..++++++.++++|++|||++|.||+| ++... |+. ..++||+|.|.+|+.++||||+|
T Consensus 5 ~~p~G~~D~lp~~~~~~~~i~~~i~~~~~~~Gy~~I~TP~~E~~e~~~~~~G~~~~~~~~~my~~~d~~g~~l~LRpd~T 84 (430)
T CHL00201 5 QAIRGTKDILPDEINYWQFIHDKALTLLSLANYSEIRTPIFENSSLYDRGIGETTDIVNKEMYRFTDRSNRDITLRPEGT 84 (430)
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCeeecCcccchHHHHhcccCCcccccccceEEEEcCCCCEEEeCCCCc
Confidence 46899999999999999999999999999999999999999 33333 433 45899999999999999999999
Q ss_pred HHHHHHHHhCC----CCceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEE
Q 000993 811 LPFIRWAISNQ----KSSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIH 885 (1196)
Q Consensus 811 ~~iaR~~a~~~----~~P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~ 885 (1196)
+|+||+++++. ..|+|+||+|+|||+++||.+|. ||+|+|+|+||..++.+|+|||.++.++|+.||+++ ++|+
T Consensus 85 ~~iaR~~~~~~~~~~~~p~R~~y~g~vfR~e~~q~GR~Ref~Q~g~EiiG~~~~~aD~Evi~l~~~~l~~lGl~~-~~i~ 163 (430)
T CHL00201 85 AGIVRAFIENKMDYHSNLQRLWYSGPMFRYERPQSGRQRQFHQLGIEFIGSIDARADTEVIHLAMQIFNELQVKN-LILD 163 (430)
T ss_pred HHHHHHHHHccccccCCCeEEEEEcceecCCCCcCCccceeEEeceEEECCCChhhHHHHHHHHHHHHHHcCCCc-eEEE
Confidence 99999987753 24899999999999999987666 599999999999999999999999999999999986 9999
Q ss_pred eCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHH----HHhcCC
Q 000993 886 LNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVG----LRFCGA 961 (1196)
Q Consensus 886 Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~----~~~~g~ 961 (1196)
|||++++... ...++.+..++.... ..++....+.+..++ ......
T Consensus 164 l~~~~~~~~~-------~~~~~~l~~~l~~~~-----------------------~~~~~~~~~~l~~~~~~~l~~k~~~ 213 (430)
T CHL00201 164 INSIGKLEDR-------QSYQLKLVEYLSQYQ-----------------------DDLDTDSQNRLYSNPIRILDSKNLK 213 (430)
T ss_pred ECCCCchhhH-------HHHHHHHHHHHHHHH-----------------------hhcCHHHHHHHHhhhHHHhhccCcc
Confidence 9998887631 111122222222210 001111112221111 000001
Q ss_pred hhhHHHHHhccCC-CChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcccccccccccccc
Q 000993 962 ADQALPRLRGALP-ADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGG 1038 (1196)
Q Consensus 962 ~~~~l~~l~~~~~-~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GG 1038 (1196)
..++++.+..+.. .+....+.|.++ .++.+|+ .+.||++++||++||||+|||+|+...+ ..++|||||
T Consensus 214 ~~~~~~~a~~l~~~~~~~~~~~l~~~~~~l~~~g~--~~~~Dl~lvRgldYYTG~vFE~~~~~~~------~~~~i~gGG 285 (430)
T CHL00201 214 TQEILDGAPKISDFLSLESTEHFYDVCTYLNLLNI--PYKINYKLVRGLDYYNDTAFEIKTLSSN------GQDTICGGG 285 (430)
T ss_pred HHHHHhhhHHHHhhhhHHHHHHHHHHHHHHHHcCC--cEEECcccccCCccccccEEEEEECCCC------Ccceeeecc
Confidence 1122322222211 123344555555 6677788 4999999999999999999999986422 234799999
Q ss_pred ccchhhhhccccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHcC
Q 000993 1039 RYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEEN 1118 (1196)
Q Consensus 1039 RYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~G 1118 (1196)
|||+|+++||+. ++||||||+|+|||+.+|.+... .+..+.+|+|++.+ ++...+|++++++||++|
T Consensus 286 RYD~L~~~fg~~----------~~PavGfa~g~erl~~~l~~~~~--~~~~~~~v~v~~~~-~~~~~~a~~ia~~LR~~G 352 (430)
T CHL00201 286 RYDSLIHQLGGP----------KTPAVGCAIGLERLLLIAKDNII--LPKQSIDVYIATQG-LKAQKKGWEIIQFLEKQN 352 (430)
T ss_pred chHHHHHHhCCC----------CCCeeEEEecHHHHHHHHhcccc--CCCCCCCEEEEEcC-HHHHHHHHHHHHHHHhCC
Confidence 999999999754 46999999999999998865332 12345789999985 667889999999999999
Q ss_pred CeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHhhccCCC
Q 000993 1119 IKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQFRNPS 1193 (1196)
Q Consensus 1119 i~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~~~~~~~ 1193 (1196)
++|++++. .+++++++++|++.|+++++++|++|.++++|+||||.+++|..++++++++.+.+....+-=|++
T Consensus 353 i~veid~~-~~~l~k~~k~A~~~~~~~viiiG~~E~~~~~vtvk~l~~~~q~~i~~~~~~~~~~~~~~~~~~~~~ 426 (430)
T CHL00201 353 IKFELDLS-SSNFHKQIKQAGKKRAKACIILGDNEIMDNCITIKWLDEQVQENAQYSNFKQEISYLKKKIAFNKK 426 (430)
T ss_pred CeEEEeeC-CCCHHHHHHHHHHcCCCEEEEEechHHhCCcEEEEECCCCCcEEEcHHHHHHHHHHHHHhhhhhhc
Confidence 99999877 568999999999999999999999999999999999999999999999999999887666544433
|
|
| >PRK12292 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-60 Score=562.61 Aligned_cols=360 Identities=21% Similarity=0.268 Sum_probs=309.1
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-CcccccceEEEeec-CCceEeecCCCcHH
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTH-GGDLLELSHELRLP 812 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~-~G~~laLRPD~T~~ 812 (1196)
..|+|++|++|.++..++++++.++++|++|||++|.||+| .+... ++...++||+|.|+ +|+.++||||+|+|
T Consensus 4 ~~p~G~~D~lp~~~~~~~~i~~~l~~~f~~~Gy~~i~tP~lE~~e~~~~~~g~~~~~~~~~f~d~~~g~~l~LRpD~T~~ 83 (391)
T PRK12292 4 QLPEGIRDLLPEEARKIEEIRRRLLDLFRRWGYEEVITPTLEYLDTLLAGGGAILDLRTFKLVDQLSGRTLGLRPDMTAQ 83 (391)
T ss_pred CCCCcchhcCHHHHHHHHHHHHHHHHHHHHcCCceeeCcchhhHHHHhccCCccchhhhEEEeecCCCCEEEECCCCcHH
Confidence 56999999999999999999999999999999999999999 33333 66778999999999 89999999999999
Q ss_pred HHHHHHhCC---CCceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEeCc
Q 000993 813 FIRWAISNQ---KSSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNH 888 (1196)
Q Consensus 813 iaR~~a~~~---~~P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~ 888 (1196)
+||+++++. ..|+|+||+|+|||+++++.++. ||+|+|+|+||.+++.+|+|||.++.++|+.+|+++ +.|+|||
T Consensus 84 iaR~~a~~~~~~~~p~r~~y~g~vfR~~~~~~gr~ref~Q~g~EiiG~~~~~aDaEvi~l~~~~l~~lgl~~-~~i~i~~ 162 (391)
T PRK12292 84 IARIAATRLANRPGPLRLCYAGNVFRAQERGLGRSREFLQSGVELIGDAGLEADAEVILLLLEALKALGLPN-FTLDLGH 162 (391)
T ss_pred HHHHHHHhccCCCCCeEEEeeceeeecCCCcCCCccchhccceEEeCCCCchHHHHHHHHHHHHHHHcCCCC-eEEEecc
Confidence 999998863 46999999999999998886655 699999999999999999999999999999999985 9999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHH
Q 000993 889 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 968 (1196)
Q Consensus 889 ~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 968 (1196)
+++++++++.+|++++.++.++++++++|+ .+. ++++. +++.+.++.+..++ .+.| ..+++++
T Consensus 163 ~~i~~~il~~~~~~~~~~~~l~~~l~~~~~---------~~~----~~~~~--~l~~~~~~~l~~l~-~~~g-~~~~l~~ 225 (391)
T PRK12292 163 VGLFRALLEAAGLSEELEEVLRRALANKDY---------VAL----EELVL--DLSEELRDALLALP-RLRG-GREVLEE 225 (391)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHhcCH---------HHH----HHHHh--cCCHHHHHHHHHHH-HhcC-CHHHHHH
Confidence 999999999999999999999999999873 222 22332 68888899999998 5777 5788888
Q ss_pred HhccCCCChHHHHHHHHH-----HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchh
Q 000993 969 LRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1043 (1196)
Q Consensus 969 l~~~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L 1043 (1196)
++.+.. +..+.+++++| .+..+|+..++.||++++||++||||+|||+|..+.+. +||+|||||+|
T Consensus 226 ~~~~~~-~~~~~~~l~~L~~l~~~l~~~~~~~~i~~D~~lvrgl~YYtG~vFe~~~~~~~~--------~i~~GGRYD~L 296 (391)
T PRK12292 226 ARKLLP-SLPIKRALDELEALAEALEKYGYGIPLSLDLGLLRHLDYYTGIVFEGYVDGVGN--------PIASGGRYDDL 296 (391)
T ss_pred HHHhcc-ChHHHHHHHHHHHHHHHHHHhCCCceEEEehhhccCCcCccceEEEEEECCCCC--------cccCCcchhhH
Confidence 887544 55556677776 67777887789999999999999999999999987554 59999999999
Q ss_pred hhhccccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEE
Q 000993 1044 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQF 1123 (1196)
Q Consensus 1044 ~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel 1123 (1196)
+++||. ++||||||+++|||+.+ . . . ....+.+++|+..+ +....+|++++++||+.|++|++
T Consensus 297 ~~~fg~-----------~~pAvGfai~ldrl~~~-~-~--~-~~~~~~~~~v~~~~-~~~~~~a~~~~~~Lr~~G~~~~~ 359 (391)
T PRK12292 297 LGRFGR-----------ARPATGFSLDLDRLLEL-Q-L--E-LPVEARKDLVIAPD-SEALAAALAAAQELRKKGEIVVL 359 (391)
T ss_pred HHHcCC-----------CCCCceEEeeHHHHHhh-c-c--c-cccccCCcEEEEeC-cccHHHHHHHHHHHHHcCCEEEE
Confidence 998853 46999999999999874 1 1 1 12234567777764 56778899999999999999998
Q ss_pred eeCCCCCHHHHHHHHHHCCC
Q 000993 1124 VPVPDPSLTEQYEYASEHDI 1143 (1196)
Q Consensus 1124 ~~~~~~~l~k~~~~A~~~g~ 1143 (1196)
... .+++++++++|++.|+
T Consensus 360 ~~~-~~~~~~~~~~a~~~~~ 378 (391)
T PRK12292 360 ALP-GRNFEDAREYARDRQI 378 (391)
T ss_pred ecC-CCChHHHHHHHhhcCe
Confidence 887 5689999999999998
|
|
| >PRK12421 ATP phosphoribosyltransferase regulatory subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-58 Score=539.11 Aligned_cols=362 Identities=18% Similarity=0.209 Sum_probs=302.3
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-CcccccceEEEeec-CCceEeecCCCcHH
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTH-GGDLLELSHELRLP 812 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~-~G~~laLRPD~T~~ 812 (1196)
..|+|++|++|.++..++++++.++++|++|||++|.||+| ++... ++...+.||+|.|+ +|+.++||||+|+|
T Consensus 8 ~~p~G~rD~lp~e~~~~~~i~~~l~~~f~~~Gy~~I~tP~~E~~e~~~~~~g~~~~~~~y~f~D~~~g~~l~LRpD~T~~ 87 (392)
T PRK12421 8 LLPDGVADVLPEEAQKIERLRRRLLDLFASRGYQLVMPPLIEYLESLLTGAGQDLKLQTFKLIDQLSGRLMGVRADITPQ 87 (392)
T ss_pred CCCCcccccCHHHHHHHHHHHHHHHHHHHHcCCEEeeCcchhhHHHHhccCCccchhceEEEEcCCCCcEEEECCcCCHH
Confidence 46999999999999999999999999999999999999999 34444 77778899999999 69999999999999
Q ss_pred HHHHHHhC--CCCceeEEEecCeeecCCCCC-CCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEeCcH
Q 000993 813 FIRWAISN--QKSSFKRYEISSVYRRAIGHS-PPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHG 889 (1196)
Q Consensus 813 iaR~~a~~--~~~P~r~~Y~G~VfR~e~~~~-~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~~ 889 (1196)
|||+++++ ...|+|+||+|+|||+++++. +.+||+|+|+|+||.+++.+|+|||.++.++|+.||+++ ++|+|||+
T Consensus 88 iaR~~a~~~~~~~p~R~~Y~g~VfR~~~~~~gr~rEf~Q~GvEiiG~~~~~aDaEvi~l~~e~l~~lgi~~-~~l~ig~~ 166 (392)
T PRK12421 88 VARIDAHLLNREGVARLCYAGSVLHTLPQGLFGSRTPLQLGAELYGHAGIEADLEIIRLMLGLLRNAGVPA-LHLDLGHV 166 (392)
T ss_pred HHHHHHhhcCCCCceEEEEeeeEEEcCCCcCCCcCccceeceEEeCCCCchhHHHHHHHHHHHHHHcCCCC-eEEEeCCH
Confidence 99998876 356999999999999988774 445699999999999999999999999999999999986 99999999
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHHH
Q 000993 890 DLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRL 969 (1196)
Q Consensus 890 ~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l 969 (1196)
++++++++.+|++++.++++.++++++++. ++ .+++.+.+++.+.++.+..++ .+.|+. +.++++
T Consensus 167 ~i~~~il~~l~l~~~~~~~l~~~l~kk~~~------------~l-~~~~~~~~~~~~~~~~l~~L~-~~~g~~-~~l~~~ 231 (392)
T PRK12421 167 GIFRRLAELAGLSPEEEEELFDLLQRKALP------------EL-AEVCQNLGVGSDLRRMFYALA-RLNGGL-EALDRA 231 (392)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhcCHH------------HH-HHHHHhcCCCHHHHHHHHHHH-HhcCCH-HHHHHH
Confidence 999999999999999999999999988732 22 345555788888888899998 577764 456665
Q ss_pred hccCC-CChHHHHHHHHH-----HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchh
Q 000993 970 RGALP-ADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1043 (1196)
Q Consensus 970 ~~~~~-~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L 1043 (1196)
...+. .++.+.+++++| .+..++....+.||++++||++||||+|||+|..+.+. +||+|||||+|
T Consensus 232 ~~~~~~~~~~~~~~l~~L~~l~~~l~~~~~~~~~~~DlslvrgldYYTG~vFe~~~~~~~~--------~i~~GGRYD~L 303 (392)
T PRK12421 232 LSVLALQDAAIRQALDELKTLAAHLKNRWPELPVSIDLAELRGYHYHTGLVFAAYIPGRGQ--------ALARGGRYDGI 303 (392)
T ss_pred HhhcccCCHHHHHHHHHHHHHHHHHHhhCCCceEEEeeccccCCCCcCCCEEEEEECCCCC--------cccCCCCccch
Confidence 55443 567788888888 44555445569999999999999999999999987543 69999999999
Q ss_pred hhhccccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEE
Q 000993 1044 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQF 1123 (1196)
Q Consensus 1044 ~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel 1123 (1196)
+++||. +.||||||+|+|||+.++... . ..++++++.+ +. ..+++++++||++|++|++
T Consensus 304 ~~~fg~-----------~~pAvGfai~lerL~~~l~~~-----~--~~~~~~~~~~-~~--~~~~~~a~~LR~~G~~~~~ 362 (392)
T PRK12421 304 GEAFGR-----------ARPATGFSMDLKELLALQFLE-----E--EAGAILAPWG-DD--PDLLAAIAELRQQGERVVQ 362 (392)
T ss_pred hHhhCC-----------CCCCceEEeeHHHHHhhcccc-----c--CCceEEeecC-Cc--HHHHHHHHHHHhCCCEEEE
Confidence 998864 369999999999999876421 1 1266777764 32 5688999999999999998
Q ss_pred eeCCCCCHHHHHHHHHHCCCcEEEEEcCC
Q 000993 1124 VPVPDPSLTEQYEYASEHDIKCLVILTDT 1152 (1196)
Q Consensus 1124 ~~~~~~~l~k~~~~A~~~g~~~~iiig~~ 1152 (1196)
.+.. ...+| +.++...++++++
T Consensus 363 ~~~~------~~~~~-~~~~~~~~~~~~~ 384 (392)
T PRK12421 363 LLPG------DDGSS-EPGCDHRLVLQDG 384 (392)
T ss_pred eCCC------cchhH-HhCCCeEEEEECC
Confidence 7652 23345 6699999998855
|
|
| >TIGR00442 hisS histidyl-tRNA synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-57 Score=537.20 Aligned_cols=380 Identities=21% Similarity=0.283 Sum_probs=311.4
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-Ccc---cccceEEEeecCCceEeecCCCcH
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQ---FKRNTVKLLTHGGDLLELSHELRL 811 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~---~~~~my~f~D~~G~~laLRPD~T~ 811 (1196)
.|+|++|++|.++..++++++.++++|++|||++|.||+| .+... ++. ..++||+|.|++|+.++||||+|+
T Consensus 2 ~p~G~~d~~p~~~~~~~~i~~~i~~~f~~~Gy~~i~~P~le~~~~~~~~~g~~~~~~~~~~~~~~d~~g~~l~LRpD~T~ 81 (397)
T TIGR00442 2 APRGTRDFLPEEMIKWQYIEETIREVFELYGFKEIRTPIFEYTELFARKVGEETDIVEKEMYTFKDKGGRSLTLRPEGTA 81 (397)
T ss_pred CCCCcCCCCHHHHHHHHHHHHHHHHHHHHcCCeEecCcccchHHHhhhccCccccccccceEEEECCCCCEEeecCCCcH
Confidence 5899999999999999999999999999999999999999 33332 232 458999999999999999999999
Q ss_pred HHHHHHHhCC---CCceeEEEecCeeecCCCCCC-CcceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEeC
Q 000993 812 PFIRWAISNQ---KSSFKRYEISSVYRRAIGHSP-PNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLN 887 (1196)
Q Consensus 812 ~iaR~~a~~~---~~P~r~~Y~G~VfR~e~~~~~-~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg 887 (1196)
|+||+++++. ..|+|+||+|+|||+++++.+ .+||+|+|+|+||.++..+|+|+|.++.++|+.+|+++ ++|+||
T Consensus 82 ~iaR~~~~~~~~~~~p~r~~y~g~vfR~e~~~~gr~ref~Q~g~eiig~~~~~~d~E~i~l~~e~l~~lg~~~-~~i~i~ 160 (397)
T TIGR00442 82 PVARAVIENKLLLPKPFKLYYIGPMFRYERPQKGRYRQFHQFGVEVIGSDSPLADAEIIALAAEILKELGIKD-FTLEIN 160 (397)
T ss_pred HHHHHHHhcccccCCCeEEEEEcCeecCCCCCCCcccceEEcCeeeeCCCCHHHHHHHHHHHHHHHHHcCCCc-eEEEec
Confidence 9999998863 459999999999999877654 45799999999999999999999999999999999985 999999
Q ss_pred cHHHHHHHHHHcCCCHHHHHHHHHHHHH-hcCCCCCcccccccHHHHHHHHHHh-cCCcHHHHHHHHHHHHHhcCChhhH
Q 000993 888 HGDLLEAIWSWAGIKAEHREKVAELLAM-MGSLRPQSSEWKSKWVVIRRQLLQE-LNLAEAVVNRLQTVGLRFCGAADQA 965 (1196)
Q Consensus 888 ~~~i~~~~l~~lgl~~~~~~~l~~~l~~-~d~~~~~~~~~k~~~~~~~~~~~~~-~~l~~~~~~~l~~l~~~~~g~~~~~ 965 (1196)
|+++++++++ .++.+.++|++ +|++. .+.+ .+++.. .++.++..+.+..++. .. ..+
T Consensus 161 ~~~i~~~~~~-------~~~~l~~~l~~~~~~~~---------~~~~-~~l~~~~~~~~~~~~~~~~~~~~---~~-~~~ 219 (397)
T TIGR00442 161 SLGILEGRLE-------YREALLRYLDKHLDKLG---------EDSV-RRLEKNPLRILDSKNEKIQELLK---EA-PKI 219 (397)
T ss_pred CcccHHHHHH-------HHHHHHHHHHHhHhhcC---------HHHH-HHHhhccccCchhhhHHHHHHHh---cC-HHH
Confidence 9999999987 36778888888 56432 2222 233332 4566666667766652 11 122
Q ss_pred HHHHhccCCCChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchh
Q 000993 966 LPRLRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1043 (1196)
Q Consensus 966 l~~l~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L 1043 (1196)
+..+ .....+.|+++ .++.+|+ .+.|||+++|+++||||+||++|..+.+. ..+||+|||||+|
T Consensus 220 ~~~~------~~~~~~~l~~l~~~l~~~~~--~i~~dl~~~r~~~YYtG~vFe~~~~~~~~------~~~i~~GGRYD~L 285 (397)
T TIGR00442 220 LDFL------DEESRAHFEELKELLDALGI--PYKIDPSLVRGLDYYTGTVFEFVTDELGA------QGTICGGGRYDGL 285 (397)
T ss_pred HHHh------hHHHHHHHHHHHHHHHHcCC--CEEECCccccCchhhcceEEEEEECCCCc------cceeeeccchHHH
Confidence 2221 23455566666 7777888 49999999999999999999999876431 2479999999999
Q ss_pred hhhccccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEE
Q 000993 1044 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQF 1123 (1196)
Q Consensus 1044 ~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel 1123 (1196)
+++||+. +.||||||+++|||+.++...........+.+|+|++.+ ++...++++++++||++|++|++
T Consensus 286 ~~~f~~~----------~~~avGfs~~~~~l~~~l~~~~~~~~~~~~~~vlV~~~~-~~~~~~~~~i~~~Lr~~gi~v~~ 354 (397)
T TIGR00442 286 VEELGGP----------PTPAVGFAIGIERLLLLLEELGLEPPEESSPDVYVVPLG-EEAELEALKLAQKLRKAGIRVEV 354 (397)
T ss_pred HHHhCCC----------CCceEEeeecHHHHHHHHHhcCCCCCCCCCCcEEEEEeC-HHHHHHHHHHHHHHHhCCCeEEE
Confidence 9999653 369999999999999988643322222456789999875 66788999999999999999998
Q ss_pred eeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCC
Q 000993 1124 VPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVK 1167 (1196)
Q Consensus 1124 ~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g 1167 (1196)
.+. .+++++++++|++.|++++|++|++|.+.++|+|||+.+|
T Consensus 355 ~~~-~~~l~k~~~~a~~~g~~~~i~ig~~e~~~~~v~vrnl~~~ 397 (397)
T TIGR00442 355 DLG-GRKLKKQLKYADKLGARFAVILGEDELANGTVTLKDLETG 397 (397)
T ss_pred eCC-CCCHHHHHHHHHHcCCCEEEEEChhHHhCCeEEEEeCCCC
Confidence 877 5789999999999999999999999999999999999875
|
This model finds a histidyl-tRNA synthetase in every completed genome. Apparent second copies from Bacillus subtilis, Synechocystis sp., and Aquifex aeolicus are slightly shorter, more closely related to each other than to other hisS proteins, and actually serve as regulatory subunits for an enzyme of histidine biosynthesis. They were excluded from the seed alignment and score much lower than do single copy histidyl-tRNA synthetases of other genomes not included in the seed alignment. These putative second copies of HisS score below the trusted cutoff. The regulatory protein kinase GCN2 of Saccharomyces cerevisiae (YDR283c), and related proteins from other species designated eIF-2 alpha kinase, have a domain closely related to histidyl-tRNA synthetase that may serve to detect and respond to uncharged tRNA(his), an indicator of amino acid starvation; these regulatory proteins are not orthologous and so score below the noise cutoff. |
| >PRK00037 hisS histidyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-56 Score=534.54 Aligned_cols=381 Identities=19% Similarity=0.279 Sum_probs=301.3
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-Cccc---ccceEEEeecCCceEeecCCCc
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQF---KRNTVKLLTHGGDLLELSHELR 810 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~---~~~my~f~D~~G~~laLRPD~T 810 (1196)
..|+|++|++|.++..++.+++.++++|++|||++|.||+| ++... +... .++||+|.|++|+.++||||+|
T Consensus 5 ~~p~G~~d~~p~~~~~~~~i~~~i~~~~~~~Gy~ei~tP~le~~~~~~~~~g~~~~~~~~~~~~~~d~~g~~l~LRpd~T 84 (412)
T PRK00037 5 QAPRGTRDILPEESAKWQYVEDTIREVFERYGFSEIRTPIFEYTELFKRKVGEETDIVEKEMYTFQDKGGRSLTLRPEGT 84 (412)
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCeEeeccccchHHHhccccCcccccccceeEEEEcCCCCEEEecCCCc
Confidence 57899999999999999999999999999999999999999 33333 3332 6899999999999999999999
Q ss_pred HHHHHHHHhCCCCceeEEEecCeeecCCCCCCC-cceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEeCc-
Q 000993 811 LPFIRWAISNQKSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNH- 888 (1196)
Q Consensus 811 ~~iaR~~a~~~~~P~r~~Y~G~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~- 888 (1196)
+|+||+++++...|+|+||+|+|||+++++.++ +||+|+|+|+||.+++.+|+|+|.++.++|+.+|+.+ +.|.|||
T Consensus 85 ~~~ar~~~~~~~~p~r~~~~g~vfR~e~~~~gr~ref~Q~g~ei~g~~~~~~d~E~i~~~~~~l~~lg~~~-~~~~l~~~ 163 (412)
T PRK00037 85 APVVRAVIEHKLQPFKLYYIGPMFRYERPQKGRYRQFHQFGVEVIGSDSPLADAEVIALAADILKALGLKG-LKLLINSL 163 (412)
T ss_pred HHHHHHHHhCCCCCeEEEEEcCccccCCCCCCcccceEEcCeeeeCCCCcchhHHHHHHHHHHHHHcCCCc-eeeeeccC
Confidence 999999998766999999999999998776544 5699999999999999999999999999999999985 8886555
Q ss_pred ---------HHHHHHHHHHcCCCHH---HHHHHH-HHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHH
Q 000993 889 ---------GDLLEAIWSWAGIKAE---HREKVA-ELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVG 955 (1196)
Q Consensus 889 ---------~~i~~~~l~~lgl~~~---~~~~l~-~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~ 955 (1196)
+++++++++. ++++- .++.+. .++...++ .. .
T Consensus 164 ~~~~~~~~~~~~l~~~l~~-~~~~l~~~~~~~~~~~~~~~~~~----------------------~~--~---------- 208 (412)
T PRK00037 164 GDFEIRANYRKALVGFLEK-GLDELDEDSKRRLETNPLRILDK----------------------KD--K---------- 208 (412)
T ss_pred CCHHHhHHHHHHHHHHHHh-CchhhchHHHHHHhhCchhhhcc----------------------cc--h----------
Confidence 4555555554 33320 000000 00001110 00 0
Q ss_pred HHhcCChhhHHHHHhccC-CCChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcccccccc
Q 000993 956 LRFCGAADQALPRLRGAL-PADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGT 1032 (1196)
Q Consensus 956 ~~~~g~~~~~l~~l~~~~-~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~ 1032 (1196)
+. .+.++.+..+. ..+....+++++| +++.+|+ ++.||++++||++||||+|||+|..+.+. .+
T Consensus 209 ----~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~--~i~~Dl~~~r~l~YYtG~vFe~~~~~~g~------~~ 275 (412)
T PRK00037 209 ----ED-QELLKDAPKLLDYLDEESKEHFEELKELLDALGI--PYVIDPRLVRGLDYYTGTVFEFVTDDLGA------QG 275 (412)
T ss_pred ----hh-HHHHhcchHHHHHhhHHHHHHHHHHHHHHHHcCC--CEEECCCcccChhhccceEEEEEECCCCc------cc
Confidence 00 00111100000 0123455666666 6777777 59999999999999999999999865432 25
Q ss_pred ccccccccchhhhhccccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCchHHHHHHHHH
Q 000993 1033 LLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVA 1112 (1196)
Q Consensus 1033 ~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~ 1112 (1196)
+||+|||||+|+++||+. +.||||||+++|||+.+|.+... .+.+|+|++.+ ++...+|+++++
T Consensus 276 ~i~~GGRYD~L~~~f~~~----------~~pavGfs~~le~l~~~l~~~~~-----~~~~vlI~~~~-~~~~~~a~~i~~ 339 (412)
T PRK00037 276 TVCGGGRYDGLVEQFGGP----------PTPAVGFAIGVERLLLLLEELGE-----EPVDVYVVPLG-EDAELAALKLAE 339 (412)
T ss_pred eeeeccchhHHHHHhCCC----------CCceEEEEEcHHHHHHHHHhcCC-----CCCCEEEEEeC-hHHHHHHHHHHH
Confidence 799999999999999642 46999999999999988764322 46789999985 556788999999
Q ss_pred HHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHH
Q 000993 1113 ELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAI 1185 (1196)
Q Consensus 1113 ~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l 1185 (1196)
+||++|++|++... ++++++++++|+++|++++|++|++|.+.|+|+|||+.+|++..++++++++.|++.+
T Consensus 340 ~Lr~~Gi~v~i~~~-~~~~~~~~~~a~~~gi~~~viig~~e~~~~~v~vr~~~~~~~~~v~~~el~~~i~~~~ 411 (412)
T PRK00037 340 KLRAAGIRVELDYG-GRKLKKQFKYADKSGARFVLILGEDELANGTVTVKDLRTGEQQTVPLDELVEALKELL 411 (412)
T ss_pred HHHHCCCeEEEeCC-CCCHHHHHHHHHHcCCCEEEEEChhHHhCCeEEEEECCCCceEEeeHHHHHHHHHHhh
Confidence 99999999998665 5789999999999999999999999999999999999999999999999999988653
|
|
| >TIGR00443 hisZ_biosyn_reg ATP phosphoribosyltransferase, regulatory subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-52 Score=481.34 Aligned_cols=300 Identities=23% Similarity=0.336 Sum_probs=262.6
Q ss_pred cccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCCCcccccceEEEeecCCceEeecCCCcHHHHHHHHhC
Q 000993 745 IQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISN 820 (1196)
Q Consensus 745 ~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~ 820 (1196)
+|++|.++..++.+++.++++|++|||++|.||+| .+...+....++||+|.|++|+.++||||+|+|+||+++++
T Consensus 1 ~D~~p~~~~~~~~i~~~l~~~~~~~Gy~~i~tP~le~~~~~~~~~~~~~~~~~~~~d~~g~~l~LRpD~T~~iaR~~~~~ 80 (314)
T TIGR00443 1 RDLLPEEAARKEEIERQLQDVFRSWGYQEIITPTLEYLDTLSAGGGILNEDLFKLFDSLGRVLGLRPDMTTPIARAVSTR 80 (314)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCcchhhHHHhcccCCcchhceEEEECCCCCEEeecCcCcHHHHHHHHHh
Confidence 58999999999999999999999999999999999 34444336788999999999999999999999999998875
Q ss_pred ---CCCceeEEEecCeeecCCCCCCC-cceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEeCcHHHHHHHH
Q 000993 821 ---QKSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIW 896 (1196)
Q Consensus 821 ---~~~P~r~~Y~G~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~~~i~~~~l 896 (1196)
...|+|+||+|+|||+++++.++ +||+|+|+|+||.++..+|+|+|.++.++|+.+|+++ +.|.|||+++++.++
T Consensus 81 ~~~~~~p~r~~y~g~VfR~~~~~~gr~re~~Q~g~Eiig~~~~~adaEvi~l~~~~l~~lg~~~-~~i~l~~~~il~~il 159 (314)
T TIGR00443 81 LRDRPLPLRLCYAGNVFRTNESGAGRSREFTQAGVELIGAGGPAADAEVIALLIEALKALGLKD-FKIELGHVGLVRALL 159 (314)
T ss_pred cccCCCCeEEEEeceEeecCCCcCCCcccccccceEEeCCCCchhHHHHHHHHHHHHHHcCCCC-eEEEeCcHHHHHHHH
Confidence 24699999999999998876554 5699999999999999999999999999999999985 999999999999999
Q ss_pred HHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCC
Q 000993 897 SWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPAD 976 (1196)
Q Consensus 897 ~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~ 976 (1196)
+.+++++++++.++++++++++. . + ++++.+.+++++.++.+..++ .+.|++.+++++++.+. .+
T Consensus 160 ~~~~~~~~~~~~l~~~l~~~~~~---------~---~-~~~~~~~~l~~~~~~~l~~l~-~~~g~~~~~l~~l~~~~-~~ 224 (314)
T TIGR00443 160 EEAGLPEEAREALREALARKDLV---------A---L-EELLAELGLDPEVRERLLALP-RLRGDGEEVLEEARALA-GS 224 (314)
T ss_pred HHcCCCHHHHHHHHHHHHhcCHH---------H---H-HHHHHhcCCCHHHHHHHHHHH-HhcCChHHHHHHHHHhc-cC
Confidence 99999999999999999998832 1 1 345556789999999999999 67888788999998844 45
Q ss_pred hHHHHHHHHH-----HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchhhhhccccc
Q 000993 977 KPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDRE 1051 (1196)
Q Consensus 977 ~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~ 1051 (1196)
..+.+++++| .++.+|+..+|.||++++|+++||||+|||+|..+.+. +||+|||||+|+++||.
T Consensus 225 ~~~~~~l~~l~~~~~~l~~~~~~~~i~~D~~~~r~~~YYtGivFe~~~~~~~~--------~i~~GGRYD~L~~~fg~-- 294 (314)
T TIGR00443 225 ETAEAALDELEAVLELLEARGVEEYISLDLGLVRGYHYYTGLIFEGYAPGLGA--------PIAGGGRYDNLLGRFGR-- 294 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeEEEecccccCCCCccceEEEEEECCCCC--------cccCCccHHHHHHHcCC--
Confidence 6666777777 77888887789999999999999999999999976443 69999999999998853
Q ss_pred cccccCCCCCCCcceecccHHHHHhhcc
Q 000993 1052 YVGYASRTNPPSGVGASLALETIIQHYP 1079 (1196)
Q Consensus 1052 ~~~~~g~~~~~pAvGfaiglerl~~~L~ 1079 (1196)
++||||||+++|||+.++.
T Consensus 295 ---------~~~AvGfa~~~d~l~~~l~ 313 (314)
T TIGR00443 295 ---------PLPATGFALNLERLLEALT 313 (314)
T ss_pred ---------CCCCceEEecHHHHHHHhc
Confidence 4699999999999987753
|
Apparant second copies of histidyl-tRNA synthetase, found in Bacillus subtilis, Synechocystis sp., Aquifex aeolicus, and others, are in fact a regulatory subunit of ATP phosphoribosyltransferase, and usually encoded by a gene adjacent to that encoding the catalytic subunit. |
| >PRK12295 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-52 Score=480.50 Aligned_cols=305 Identities=20% Similarity=0.270 Sum_probs=252.8
Q ss_pred HhhHHHHHHHHHHHHHcCCccccccce----eecCC-CcccccceEEEeecCCceEeecCCCcHHHHHHHHhC-CCCcee
Q 000993 753 ELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISN-QKSSFK 826 (1196)
Q Consensus 753 ~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~-~~~P~r 826 (1196)
...+++++.++++|++|||++|.||+| .+..+ +++..++||+|.|++|+.++||||+|+||||+++++ ...|.|
T Consensus 5 ~~~~~i~~~i~~~f~~~Gy~~I~tP~lE~~e~~~~~~g~~~~~~~~~f~D~~G~~l~LRpD~T~piaR~~~~~~~~~p~R 84 (373)
T PRK12295 5 SASAAAAEALLASFEAAGAVRVDPPILQPAEPFLDLSGEDIRRRIFVTSDENGEELCLRPDFTIPVCRRHIATAGGEPAR 84 (373)
T ss_pred hhHHHHHHHHHHHHHHcCCEEeeCCccccHHHhhhccCchhhcceEEEECCCCCEEeeCCCCcHHHHHHHHHcCCCCCeE
Confidence 456799999999999999999999999 33334 677788999999999999999999999999988774 466999
Q ss_pred EEEecCeeecCCCCCCCcceeEeEEEEeCCC-CccchHHHHHHHHHHHHHcCCCCceEEEeCcHHHHHHHHHHcCCCHHH
Q 000993 827 RYEISSVYRRAIGHSPPNRYLQGDFDIIGGA-SALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEH 905 (1196)
Q Consensus 827 ~~Y~G~VfR~e~~~~~~~ef~Q~GvEiiG~~-~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~~~i~~~~l~~lgl~~~~ 905 (1196)
+||+|+|||++ .++.+||+|+|+|+||.. ++.+|+|||.+++++|+.+|+.+ ++|+|||+++++++++.+++++++
T Consensus 85 ~~Y~g~VfR~~--~gr~rEf~Q~GvEiiG~~~~~~aDaEvi~l~~~~L~~lgl~~-~~i~ig~~~il~~ll~~l~l~~~~ 161 (373)
T PRK12295 85 YAYLGEVFRQR--RDRASEFLQAGIESFGRADPAAADAEVLALALEALAALGPGD-LEVRLGDVGLFAALVDALGLPPGW 161 (373)
T ss_pred EEEEccEEECC--CCCCCcceEeeEEeeCCCCCccchHHHHHHHHHHHHHcCCCc-eEEEeCCHHHHHHHHHHcCCCHHH
Confidence 99999999998 556778999999999975 57999999999999999999985 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCC----Cc-------------------------------------ccccccHHHHHHHHHHhc---
Q 000993 906 REKVAELLAMMGSLRP----QS-------------------------------------SEWKSKWVVIRRQLLQEL--- 941 (1196)
Q Consensus 906 ~~~l~~~l~~~d~~~~----~~-------------------------------------~~~k~~~~~~~~~~~~~~--- 941 (1196)
+++++++|+++++.+. .. ...+....++.+.+....
T Consensus 162 ~~~l~~~i~kk~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~r~~~ei~~~l~~~~~~~ 241 (373)
T PRK12295 162 KRRLLRHFGRPRSLDALLARLAGPRVDPLDEHAGVLAALADEAAARALVEDLMSIAGISPVGGRSPAEIARRLLEKAALA 241 (373)
T ss_pred HHHHHHHHhccchHHHHHHhhcccccccccchhhhhhhhccchhhhhhhhhhhhhccccccccccHHHHHHHHHhhhccc
Confidence 9999999999886310 00 000112223333333221
Q ss_pred ---CCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCCh-HHHHHHHHH-----HHHHcCCC-ceEEEcCCCCCCCCCcc
Q 000993 942 ---NLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADK-PTRKALDEL-----YLRIWRIE-KNIYIDALMPPIESYHR 1011 (1196)
Q Consensus 942 ---~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~-~~~~~l~~L-----~l~~~g~~-~~i~~Dl~lvrgl~YYT 1011 (1196)
+++.+.++.+..++ .+.|++++++++++.+...++ .+.+++++| .++.+|+. +++.||++++||++|||
T Consensus 242 ~~~~~~~~~~~~l~~l~-~~~g~~~~~~~~l~~l~~~~~~~~~~al~~L~~l~~~l~~~g~~~~~v~~D~~~vrgl~YYT 320 (373)
T PRK12295 242 AAARLPAEALAVLERFL-AISGPPDAALAALRALAADAGLDLDAALDRFEARLAALAARGIDLERLRFSASFGRPLDYYT 320 (373)
T ss_pred ccCCCCHHHHHHHHHHH-HccCCHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHcCCCcceEEEecccccCCcccc
Confidence 78888999999998 688988889999998766556 677787777 77888886 67999999999999999
Q ss_pred ceEEEEEecCCCCccccccccccccccccchhhhhccccccccccCCCCCCCcceecccHHHHHhh
Q 000993 1012 NLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQH 1077 (1196)
Q Consensus 1012 G~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~ 1077 (1196)
|+|||+|..+.+ ..+||+|||||+|++.||+ +.++||||||+++|||+.+
T Consensus 321 GiVFe~~~~~~~-------~~~I~~GGRYD~Li~~fg~---------~~~~pAvGfai~~drl~~~ 370 (373)
T PRK12295 321 GFVFEIRAAGNG-------DPPLAGGGRYDGLLTRLGA---------GEPIPAVGFSIWLDRLAAL 370 (373)
T ss_pred ceEEEEEECCCC-------CCcccCCcCHHHHHHHhCC---------CCCCCeeEEEEcHHHHHhh
Confidence 999999987542 1379999999999999863 1357999999999999754
|
|
| >PF13393 tRNA-synt_His: Histidyl-tRNA synthetase; PDB: 3HRI_E 3HRK_A 3LC0_A 1Z7N_A 1Z7M_D 3NET_A 1H4V_B 3OD1_A 4E51_B 3RAC_A | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-50 Score=465.26 Aligned_cols=297 Identities=24% Similarity=0.381 Sum_probs=244.5
Q ss_pred cccccchhhhHhhHHHHHHHHHHHHHcCCccccccceeec----CCCcccccceEEEeecCCceEeecCCCcHHHHHHHH
Q 000993 743 SSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLL----GDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAI 818 (1196)
Q Consensus 743 G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~----~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a 818 (1196)
|++|++|.+++.++++++.++++|++|||++|.||+|+.. .......+++|+|.|++|+.++||||+|+|+||+++
T Consensus 1 G~~d~~~~~~~~~~~i~~~l~~~f~~~Gy~~i~~P~le~~~~~~~~~~~~~~~~~~~~D~~G~~l~LR~D~T~~iaR~~a 80 (311)
T PF13393_consen 1 GFRDLLPEEARKRERIESKLREVFERHGYEEIETPLLEYYELFLDKSGEDSDNMYRFLDRSGRVLALRPDLTVPIARYVA 80 (311)
T ss_dssp T---B-HHHHHHHHHHHHHHHHHHHHTT-EE-B--SEEEHHHHHCHSSTTGGCSEEEECTTSSEEEE-SSSHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHcCCEEEECCeEeecHHhhhccccchhhhEEEEecCCcEeccCCCCcHHHHHHHH
Confidence 8999999999999999999999999999999999999332 223333559999999999999999999999999999
Q ss_pred hCC--CCceeEEEecCeeecCCCCCC-CcceeEeEEEEeCCCCccchHHHHHHHHHHHH-HcCCCCceEEEeCcHHHHHH
Q 000993 819 SNQ--KSSFKRYEISSVYRRAIGHSP-PNRYLQGDFDIIGGASALTEAEVLKVTMDIVT-RFFHAESCDIHLNHGDLLEA 894 (1196)
Q Consensus 819 ~~~--~~P~r~~Y~G~VfR~e~~~~~-~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~-~lgi~~~~~i~Lg~~~i~~~ 894 (1196)
++. ..|.|+||+|+|||+++++.+ .+||+|+|+|+||.+++.+|+|+|.++.++|+ .+|+++ +.|+|||++++++
T Consensus 81 ~~~~~~~~~r~~y~g~vfR~~~~~~g~~re~~Q~g~Eiig~~~~~~daEvi~l~~e~l~~~l~~~~-~~i~i~h~~i~~~ 159 (311)
T PF13393_consen 81 RNLNLPRPKRYYYIGPVFRYERPGKGRPREFYQCGFEIIGSSSLEADAEVIKLADEILDRELGLEN-FTIRINHTGILDA 159 (311)
T ss_dssp HCCGSSSSEEEEEEEEEEEEETTTTTBESEEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTS-EEEEEEEHHHHHH
T ss_pred HhcCcCCCceEEEEcceeeccccCCCCCceeEEEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCCC-cEEEEcCchhhHH
Confidence 974 679999999999999877654 45699999999999999999999999999997 999975 9999999999999
Q ss_pred HHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCC
Q 000993 895 IWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALP 974 (1196)
Q Consensus 895 ~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~ 974 (1196)
+++.+|++++.++.+..++.+++. .++ ++++.+.+++.+.++.+..++ .+.|+.+.+.+.+.. +.
T Consensus 160 il~~~gl~~~~~~~l~~~l~~~~~------------~~~-~~~~~~~~l~~~~~~~l~~l~-~~~g~~~~l~~~~~~-~~ 224 (311)
T PF13393_consen 160 ILEHLGLPEDLRRELLEALDKKDL------------SEL-KELLSELGLSSESLEILDKLP-ELEGDPEALEELLES-LP 224 (311)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHTHH------------HHH-HHHHHHTTTTHHHHHHHHHHH-HHHHSHHHHHHHHHH-HT
T ss_pred HHhhcCCChhhhhhhhhheecccc------------ccc-hhhhcccccchhhhhhhhccc-cccchHHHHHHHHHH-Hh
Confidence 999999999999999999988762 233 466667889999999999988 567775555554444 44
Q ss_pred CChHHHHHHHHH-----HHHHcC-CCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchhhhhcc
Q 000993 975 ADKPTRKALDEL-----YLRIWR-IEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMW 1048 (1196)
Q Consensus 975 ~~~~~~~~l~~L-----~l~~~g-~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg 1048 (1196)
.++.+.+++++| +++.+| ...+|.||++++|+++||||+|||+|..+.+. .||+|||||+|+++||
T Consensus 225 ~~~~~~~~~~~L~~l~~~l~~~~~~~~~i~~D~~~~r~~~YYtG~vFe~~~~~~~~--------~ia~GGRYD~L~~~fg 296 (311)
T PF13393_consen 225 SSPALQEALEELEELLKLLEALGYPSIKIIFDLSLVRGLDYYTGIVFEVYAPGRGS--------PIAGGGRYDNLLEQFG 296 (311)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHCTHTTTTEEEETT-GTSSTTEESEEEEEEETTSSS--------ESEEEEEETTHHHHTT
T ss_pred hhhhhHHHHHHHHHHHHHHHHhcccCceEEEChhhccchhhcCCEEEEEEEcCCCc--------eEecccChhHHHHHhC
Confidence 445455555555 778888 56799999999999999999999999986554 7999999999999985
Q ss_pred ccccccccCCCCCCCcceecccHHHH
Q 000993 1049 DREYVGYASRTNPPSGVGASLALETI 1074 (1196)
Q Consensus 1049 ~~~~~~~~g~~~~~pAvGfaiglerl 1074 (1196)
. ++||||||+++|||
T Consensus 297 ~-----------~~~AvGfai~ld~L 311 (311)
T PF13393_consen 297 K-----------PIPAVGFAIGLDRL 311 (311)
T ss_dssp S-----------S-EEEEEEEEHHHH
T ss_pred C-----------CCceEEEEEEeccC
Confidence 3 46999999999997
|
... |
| >PRK12293 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-48 Score=437.45 Aligned_cols=269 Identities=18% Similarity=0.226 Sum_probs=218.1
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccceeecCC-CcccccceEEEeecCCceEeecCCCcHHHHHHH
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWA 817 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~ 817 (1196)
..|+|++|++|.++..++++++.++++|++|||++|.||+|++... .....++||+|.|++|+.++||||+|+||||++
T Consensus 6 ~~p~G~rD~lp~e~~~~~~i~~~l~~vf~~~Gy~~I~tP~lE~~e~~~~~~~~~~y~~~D~~g~~l~LRpD~T~~iaR~~ 85 (281)
T PRK12293 6 EIPQGSKLYFGKSAKLKREIENVASEILYENGFEEIVTPFFSYHQHQSIADEKELIRFSDEKNHQISLRADSTLDVVRIV 85 (281)
T ss_pred CCCCcccccCcHHHHHHHHHHHHHHHHHHHcCCeEeeccceeehhhhcccchhceEEEECCCCCEEEECCcCCHHHHHHH
Confidence 5699999999999999999999999999999999999999965554 445678999999999999999999999999999
Q ss_pred HhCC---CCceeEEEecCeeecCCCCCCCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEeCcHHHHHH
Q 000993 818 ISNQ---KSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEA 894 (1196)
Q Consensus 818 a~~~---~~P~r~~Y~G~VfR~e~~~~~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~~~i~~~ 894 (1196)
+++. ..|+|+||+|+|||+++ +||+|+|+|+||.+++ +|||.+|.++|+++|++ +.|+|||++++++
T Consensus 86 a~~~~~~~~p~r~~Y~g~vfR~~~-----rEf~Q~GvEliG~~~~---~Evi~la~~~l~~lgl~--~~i~ig~~~i~~~ 155 (281)
T PRK12293 86 TKRLGRSTEHKKWFYIQPVFRYPS-----NEIYQIGAELIGEEDL---SEILNIAAEIFEELELE--PILQISNIKIPKL 155 (281)
T ss_pred HHhcccCCCceeEEEeccEEecCC-----CcccccCeEeeCCCCH---HHHHHHHHHHHHHcCCC--CEEEECCHHHHHH
Confidence 8753 45999999999999863 7999999999999986 69999999999999995 5799999999999
Q ss_pred HHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCC
Q 000993 895 IWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALP 974 (1196)
Q Consensus 895 ~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~ 974 (1196)
+++.++++++..+.. .++ +++. +.++.+..++ .+.|. + .++++...
T Consensus 156 ~l~~~~~~~~~~~~~--~~~---------------------~~~~------~~~~~l~~l~-~~~~~-~-~~~~~~~~-- 201 (281)
T PRK12293 156 VAEILGLDIEVFKKG--QIE---------------------KLLA------QNVPWLNKLV-RIKTL-E-DLDEVIEL-- 201 (281)
T ss_pred HHHHcCCCHHHHhHH--HHH---------------------HHHH------HhHHHHHHHH-hcCCH-H-HHHHHHhh--
Confidence 999999987654221 011 1111 1233444454 23332 2 23344332
Q ss_pred CChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchhhhhcccccc
Q 000993 975 ADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREY 1052 (1196)
Q Consensus 975 ~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~ 1052 (1196)
.+....+++++| .++.+++. .+.||++++||++||||+|||+|.++. +||+|||||+.
T Consensus 202 ~~~~~~~~l~~l~~~l~~l~~~-~~~~Dl~~vrgl~YYTGivFe~~~~~~----------~i~~GGRYD~~--------- 261 (281)
T PRK12293 202 VPDEIKEELEKLKELAESIKYE-NLVIAPLYYAKMRYYDDLFFRFFDGNS----------TLASGGNYEID--------- 261 (281)
T ss_pred CCHHHHHHHHHHHHHHHHcCCC-cEEEccccccCCCCccceEEEEEECCc----------eeccccCCCCC---------
Confidence 235778888888 77777764 499999999999999999999998631 59999999931
Q ss_pred ccccCCCCCCCcceecccHHHHHhhcc
Q 000993 1053 VGYASRTNPPSGVGASLALETIIQHYP 1079 (1196)
Q Consensus 1053 ~~~~g~~~~~pAvGfaiglerl~~~L~ 1079 (1196)
+.||||||+|+|||+.+|.
T Consensus 262 --------~~PAvGfa~~ld~l~~~l~ 280 (281)
T PRK12293 262 --------GISSSGFALYTDNLIEILL 280 (281)
T ss_pred --------CCCcceEEeeHHHHHHHhh
Confidence 3699999999999988753
|
|
| >COG3705 HisZ ATP phosphoribosyltransferase involved in histidine biosynthesis [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-47 Score=434.43 Aligned_cols=368 Identities=19% Similarity=0.196 Sum_probs=289.9
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccceee----cCC-CcccccceEEEeecCCceEeecCCCcHHH
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYL----LGD-CPQFKRNTVKLLTHGGDLLELSHELRLPF 813 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~----~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~i 813 (1196)
..|.|++|.+|.+++.++.|++++++.|.+|||+.|+||++.+ ... ++..+++||+|+|+.|+.++||||||+||
T Consensus 4 ~lp~g~rd~Lp~e~~~~~~i~~~l~~~f~~~Gy~~v~tP~lE~~d~~l~~~g~~l~~~~f~l~d~~g~~l~LRpD~T~pV 83 (390)
T COG3705 4 QLPEGIRDVLPLEARRKEEIRDQLLALFRAWGYERVETPTLEPADPLLDGAGEDLRRRLFKLEDETGGRLGLRPDFTIPV 83 (390)
T ss_pred cCCCcchhcchhHHhhHHHHHHHHHHHHHHhCCccccccccchhhhhhhccchhhhhhheEEecCCCCeEEecccccHHH
Confidence 5789999999999999999999999999999999999999922 223 67779999999999999999999999999
Q ss_pred HHHHHhCCC-CceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEeCcHHH
Q 000993 814 IRWAISNQK-SSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDL 891 (1196)
Q Consensus 814 aR~~a~~~~-~P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~~~i 891 (1196)
+|.+++... .|.|+||.|+|||..+...+++ ||+|+|+|+||.++..||+|||.+++.+|+++|+.+ ++|.|||.+|
T Consensus 84 aR~~~~~~~~~P~Rl~Y~G~Vfr~~~~~~g~~~Ef~QaGiEllG~~~~~ADaEvi~la~~~L~~~gl~~-~~l~LG~~gi 162 (390)
T COG3705 84 ARIHATLLAGTPLRLSYAGKVFRAREGRHGRRAEFLQAGIELLGDDSAAADAEVIALALAALKALGLAD-LKLELGHAGI 162 (390)
T ss_pred HHHHHHhcCCCCceeeecchhhhcchhccCcccchhhhhhHHhCCCcchhhHHHHHHHHHHHHHcCCcC-eEEEeccHHH
Confidence 999988654 5999999999999865555555 999999999999999999999999999999999986 9999999999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHHHhc
Q 000993 892 LEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRG 971 (1196)
Q Consensus 892 ~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~ 971 (1196)
+++++..+++++.++++++++|.+++... + .++....+++++....+..++. +.|. .+++.+++.
T Consensus 163 f~all~~~~l~~~~~~~L~~a~~~k~~~~------------~-~~~~~~~~~~~~~~~~l~~l~~-l~gg-~e~l~~~~~ 227 (390)
T COG3705 163 FRALLAAAGLPGGWRARLRRAFGDKDLLG------------L-ELLVLAAPLSPELRGRLSELLA-LLGG-REVLERARG 227 (390)
T ss_pred HHHHHHHcCCChhHHHHHHHHHhccchhh------------H-HHHhhccCCChhhhHHHHHHHH-HhCC-HHHHHHHHH
Confidence 99999999999999999999999998432 1 3444446777888888888884 5555 466677776
Q ss_pred cCCCChHHHHHHHHH---HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchhhhhcc
Q 000993 972 ALPADKPTRKALDEL---YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMW 1048 (1196)
Q Consensus 972 ~~~~~~~~~~~l~~L---~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg 1048 (1196)
.+........+++++ .....+...++.+|++++++++||||++|++|..+.+. ++++|||||+|.+.||
T Consensus 228 ~l~~~~~~~~al~~~~~l~di~~~~~e~i~lDLg~l~~~~YyTg~~F~ay~~~~~~--------al~~GGRYd~l~~~f~ 299 (390)
T COG3705 228 LLDELMAQGIALNEGRALADIARRLIEKIALDLGRLRHFDYYTGLVFLAYADGLGD--------ALASGGRYDGLLGLFG 299 (390)
T ss_pred hhhhhhhhhhhhhhhhhHHHHHhccchhheehhhcccccchhhceeeeeeeccccc--------hhhcccchhhhhhhcC
Confidence 554333323444444 11122233569999999999999999999999887765 7999999999988886
Q ss_pred ccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEEeeCCC
Q 000993 1049 DREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPD 1128 (1196)
Q Consensus 1049 ~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel~~~~~ 1128 (1196)
.. .||+||++++++|... ..+ ......++.+.... +.....++++++++|..|-.+.....
T Consensus 300 ~~-----------~patGf~~~l~~l~~~----~~~-~~~~~~~~~f~~~~-~~~~~~~~e~~~~~r~~g~~~~~~l~-- 360 (390)
T COG3705 300 RA-----------APATGFALRLDALAQG----GLP-LEERRYAALFGREL-DYYTGAAFEAAQALRLAGGGRYDRLL-- 360 (390)
T ss_pred cc-----------ccchhhHhhHHHHHhc----CCC-cccchhhhccCccc-hhhHHHHHHHHHHhcccCCeEEEecc--
Confidence 53 3999999999999862 111 12334455554442 33457899999999977655542222
Q ss_pred CCHHHHHHHHHHCCCcEEEEEcCC
Q 000993 1129 PSLTEQYEYASEHDIKCLVILTDT 1152 (1196)
Q Consensus 1129 ~~l~k~~~~A~~~g~~~~iiig~~ 1152 (1196)
...-..+...++.+.+.+...
T Consensus 361 ---~g~~~~~~~~~~~~~~~~~~~ 381 (390)
T COG3705 361 ---TGLGASEEIPGVGFSLWLDRG 381 (390)
T ss_pred ---cccchHhhhcccceeEeeccc
Confidence 112234445677777776554
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-47 Score=423.04 Aligned_cols=261 Identities=28% Similarity=0.399 Sum_probs=219.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc-----hhHHHHHHHHHHHHhcCCCCeeeeeeeeeecC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-----PVNDRILREVATLSRLQHQHVVRYYQAWFETG 453 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-----~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~ 453 (1196)
+.+.|.+.+.||+|+||.|.+|..+.||+.||||+++...... .....+.+|+++|++|+|||||++++.|.
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~--- 246 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFE--- 246 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeee---
Confidence 4477889999999999999999999999999999998654221 12334679999999999999999998873
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL 532 (1196)
...+.||||||+. |.|.+.+...+.+.+.....+++|++.|+
T Consensus 247 -------------------------------------~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~av 289 (475)
T KOG0615|consen 247 -------------------------------------VPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAV 289 (475)
T ss_pred -------------------------------------cCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHH
Confidence 2456799999996 69999999999999999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCC---CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
.|||++||+||||||+|||+..+ ..+||+|||+|+...... .+.+.||||.|.|||++.+.
T Consensus 290 kYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~s----------------fm~TlCGTpsYvAPEVl~~k 353 (475)
T KOG0615|consen 290 KYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGS----------------FMKTLCGTPSYVAPEVLASK 353 (475)
T ss_pred HHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccccce----------------ehhhhcCCccccChhheecC
Confidence 99999999999999999999876 779999999999764221 24678999999999999874
Q ss_pred C--CCCCcchhHHHHHHHHHhhc---CCchhHHHH-HHHHHhhhcCC-CCCccccCCHHHHHHHHHcccCCCCCCCCHHH
Q 000993 610 P--KIDEKADMYSLGIVFFELWH---PFSTAMERQ-IVLSDLKQKGE-LPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 682 (1196)
Q Consensus 610 ~--~~s~ksDVwSlGviLyELlt---Pf~~~~~~~-~~~~~l~~~~~-~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~e 682 (1196)
+ .+..++||||+||+||-+++ ||....... ...++...... .|+.|..++.+..+||.+||..||++|||+++
T Consensus 354 g~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~e 433 (475)
T KOG0615|consen 354 GVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADE 433 (475)
T ss_pred CeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHH
Confidence 3 24568999999999999997 787665544 33333333333 46789999999999999999999999999999
Q ss_pred HHhccCCCCchHH
Q 000993 683 LLQDALPPQMEYE 695 (1196)
Q Consensus 683 iL~~~~~~~~~~~ 695 (1196)
+|+|||++-....
T Consensus 434 aL~hpW~~~~~~~ 446 (475)
T KOG0615|consen 434 ALNHPWFKDAPCL 446 (475)
T ss_pred HhcChhhhccccc
Confidence 9999999866533
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-46 Score=415.21 Aligned_cols=263 Identities=30% Similarity=0.450 Sum_probs=229.2
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc-hhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
...++|+++++||+|+||+|+.++.+.+++.||+|+++++.... ........|..+|..++||+||+++..|
T Consensus 22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysF------- 94 (357)
T KOG0598|consen 22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSF------- 94 (357)
T ss_pred CChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEec-------
Confidence 33589999999999999999999999999999999998765432 3567889999999999999999999777
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
++...+|+|+||++ |.|..+|++.+.|++..++.|+.+|+.||.||
T Consensus 95 ---------------------------------Qt~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~L 141 (357)
T KOG0598|consen 95 ---------------------------------QTEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYL 141 (357)
T ss_pred ---------------------------------ccCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHH
Confidence 45788999999996 59999999999999999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++|||||||||+|||||.+||++|+|||+|+.....+ ....+.|||+.|||||++.+ ..|+.+
T Consensus 142 H~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~---------------~~t~tfcGT~eYmAPEil~~-~gy~~~ 205 (357)
T KOG0598|consen 142 HSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG---------------DATRTFCGTPEYMAPEILLG-KGYDKA 205 (357)
T ss_pred HhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCC---------------CccccccCCccccChHHHhc-CCCCcc
Confidence 99999999999999999999999999999998532111 12345799999999999998 579999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC----CHHHHHhccC
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP----SATELLQDAL 688 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP----ta~eiL~~~~ 688 (1196)
+|||||||++|||++ ||...+......+++..+...++. ..+++++++++++|+.||.+|. .+.+|-+|+|
T Consensus 206 vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~--~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~Hpf 283 (357)
T KOG0598|consen 206 VDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPG--YLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPF 283 (357)
T ss_pred cchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCc--cCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcc
Confidence 999999999999996 898888777777777655344433 2456999999999999999995 6999999999
Q ss_pred CCCchHHHHH
Q 000993 689 PPQMEYELLD 698 (1196)
Q Consensus 689 ~~~~~~~~~~ 698 (1196)
|..+.|+.+.
T Consensus 284 F~~inW~~l~ 293 (357)
T KOG0598|consen 284 FKGINWEKLL 293 (357)
T ss_pred cccCCHHHHH
Confidence 9999998663
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-46 Score=431.84 Aligned_cols=252 Identities=31% Similarity=0.513 Sum_probs=224.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
..|+..+.||+|||+.||.+++..+|+.||+|++..+. ......+.+.+|+++.++|+|||||+++++|
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~F---------- 87 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFF---------- 87 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEe----------
Confidence 67999999999999999999999999999999998654 2344567899999999999999999999998
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
++..++|||+|+|. ++|..++.+++.++|.+++.|++||+.||.|||++
T Consensus 88 ------------------------------EDs~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~ 137 (592)
T KOG0575|consen 88 ------------------------------EDSNNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSL 137 (592)
T ss_pred ------------------------------ecCCceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence 45788999999997 69999999999999999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
+|+|||||..|+|++++.+|||+|||+|+.+..+. -...+.||||.|.|||++.. ..++..+||
T Consensus 138 ~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~---------------Erk~TlCGTPNYIAPEVl~k-~gHsfEvDi 201 (592)
T KOG0575|consen 138 GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG---------------ERKKTLCGTPNYIAPEVLNK-SGHSFEVDI 201 (592)
T ss_pred CceecccchhheeecCcCcEEecccceeeeecCcc---------------cccceecCCCcccChhHhcc-CCCCCchhh
Confidence 99999999999999999999999999999876432 12457899999999999997 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
||+|||||.|+. ||....-.+...++......+|. ..+.++++||.+||++||.+|||+++||.|+||.+
T Consensus 202 WSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~---~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~ 274 (592)
T KOG0575|consen 202 WSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPS---HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKS 274 (592)
T ss_pred hhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccccc---ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhC
Confidence 999999999996 88887777777776665555665 55679999999999999999999999999999943
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-46 Score=412.69 Aligned_cols=258 Identities=29% Similarity=0.465 Sum_probs=219.8
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
+..+.+++.++.||+|..|+||+|+|+.|++.+|+|+|.. .......+++.+|+++++.++|||||.+||+|+..+
T Consensus 75 ~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~-~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~--- 150 (364)
T KOG0581|consen 75 GISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL-NIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNG--- 150 (364)
T ss_pred ccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc-cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCC---
Confidence 4556789999999999999999999999999999999953 345567889999999999999999999999996531
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
. .++|+||||+ |+|.+++...+++++....+++.+|++||.||
T Consensus 151 -----------------------------------~-~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YL 194 (364)
T KOG0581|consen 151 -----------------------------------E-EISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYL 194 (364)
T ss_pred -----------------------------------c-eEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 1 5799999997 69999999999999999999999999999999
Q ss_pred Hh-CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 536 HG-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 536 Hs-~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
|. ++||||||||+|||++..|.|||||||.++.+... ...+++||..|||||.+++ ..|+.
T Consensus 195 h~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS-----------------~a~tfvGT~~YMsPERi~g-~~Ys~ 256 (364)
T KOG0581|consen 195 HEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS-----------------IANTFVGTSAYMSPERISG-ESYSV 256 (364)
T ss_pred hhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-----------------hcccccccccccChhhhcC-CcCCc
Confidence 95 99999999999999999999999999999976432 2356899999999999999 68999
Q ss_pred cchhHHHHHHHHHhhc---CCchh-----HHHHHHHHHhhhcCCCCCccc-cCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 615 KADMYSLGIVFFELWH---PFSTA-----MERQIVLSDLKQKGELPPSWV-AKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~-----~~~~~~~~~l~~~~~~p~~~~-~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
++||||||++++||++ ||.+. ...+....+.. ...|..+. ..++++++||..||++||.+|||+.|+++
T Consensus 257 ~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~--~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 257 KSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD--EPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred ccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc--CCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 9999999999999996 66653 22233333322 22232333 37889999999999999999999999999
Q ss_pred ccCCCCchH
Q 000993 686 DALPPQMEY 694 (1196)
Q Consensus 686 ~~~~~~~~~ 694 (1196)
|||+.+...
T Consensus 335 Hpfi~~~~~ 343 (364)
T KOG0581|consen 335 HPFIKKFED 343 (364)
T ss_pred CHHHhhccc
Confidence 999887654
|
|
| >cd00773 HisRS-like_core Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-45 Score=411.64 Aligned_cols=249 Identities=23% Similarity=0.347 Sum_probs=208.2
Q ss_pred hhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-CcccccceEEEeecCCceEeecCCCcHHHHHHHHhCCC---
Q 000993 751 DTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQK--- 822 (1196)
Q Consensus 751 ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~~~--- 822 (1196)
++..++++++.++++|++|||++|.||+| .+... ++...++||+|.|++|+.++||||+|+|+||+++++..
T Consensus 1 ~~~~~~~l~~~l~~~f~~~Gy~~v~tP~le~~~~~~~~~~~~~~~~~~~~~d~~g~~l~LRpd~T~~iaR~~a~~~~~~~ 80 (261)
T cd00773 1 EAALRRYIEDTLREVFERYGYEEIDTPVFEYTELFLRKSGDEVSKEMYRFKDKGGRDLALRPDLTAPVARAVAENLLSLP 80 (261)
T ss_pred ChHHHHHHHHHHHHHHHHcCCEEeeccceeeHHHhcccccccccceEEEEECCCCCEEEeCCCCcHHHHHHHHhcCccCC
Confidence 46789999999999999999999999999 33333 56778999999999999999999999999999998654
Q ss_pred CceeEEEecCeeecCCCCC-CCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEeCcHHHHHHHHHHcCC
Q 000993 823 SSFKRYEISSVYRRAIGHS-PPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGI 901 (1196)
Q Consensus 823 ~P~r~~Y~G~VfR~e~~~~-~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~~~i~~~~l~~lgl 901 (1196)
.|+|+||+|+|||++.++. +.+||+|+|+|+||.+++.+|+|+|.++.++|+.+|+.+ +.|+|||+++++++++.+++
T Consensus 81 ~p~k~~y~g~vfR~e~~~~g~~re~~Q~g~Eiig~~~~~~daE~i~l~~~~l~~lg~~~-~~i~l~~~~i~~~l~~~~~~ 159 (261)
T cd00773 81 LPLKLYYIGPVFRYERPQKGRYREFYQVGVEIIGSDSPLADAEVIALAVEILEALGLKD-FQIKINHRGILDGIAGLLED 159 (261)
T ss_pred CCeEEEEEcCEEecCCCCCCCccceEEeceeeeCCCChHHHHHHHHHHHHHHHHcCCCc-eEEEECCHHHHHHHhhccCC
Confidence 6999999999999987764 555799999999999999999999999999999999985 99999999999999999999
Q ss_pred CHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChHHHH
Q 000993 902 KAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRK 981 (1196)
Q Consensus 902 ~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~ 981 (1196)
+++.+.++.+.+++ ...+
T Consensus 160 ~~~~~~~l~~~l~~--------------------------------------------------------------~~l~ 177 (261)
T cd00773 160 REEYIERLIDKLDK--------------------------------------------------------------EALA 177 (261)
T ss_pred CHHHHHHHHHHhhH--------------------------------------------------------------HHHH
Confidence 87655444322221 0111
Q ss_pred HHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchhhhhccccccccccCCC
Q 000993 982 ALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRT 1059 (1196)
Q Consensus 982 ~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~ 1059 (1196)
.|+++ .++.+|+..+|.||++++|+++||||+||++|..+.+ ...+||+|||||+|+++|++.
T Consensus 178 ~l~~l~~~l~~~~~~~~i~~d~~~~r~~~YYtG~vF~~~~~~~~------~~~~i~~GGRYD~L~~~f~~~--------- 242 (261)
T cd00773 178 HLEKLLDYLEALGVDIKYSIDLSLVRGLDYYTGIVFEAVADGLG------AQGSIAGGGRYDGLLEEFGGE--------- 242 (261)
T ss_pred HHHHHHHHHHHcCCCceEEEcCccccCCcccCceEEEEEECCCC------ccCeEeeccCHHHHHHHhCCC---------
Confidence 12222 4566777678999999999999999999999998751 123799999999999987432
Q ss_pred CCCCcceecccHHHHHhhc
Q 000993 1060 NPPSGVGASLALETIIQHY 1078 (1196)
Q Consensus 1060 ~~~pAvGfaiglerl~~~L 1078 (1196)
++||||||+++|||+.+|
T Consensus 243 -~~~avGfa~~~d~l~~~~ 260 (261)
T cd00773 243 -DVPAVGFAIGLERLLLAL 260 (261)
T ss_pred -CCCeEEEEEcHHHHHHhh
Confidence 469999999999998775
|
HisRS is a homodimer. It is responsible for the attachment of histidine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs. This domain is also found at the C-terminus of eukaryotic GCN2 protein kinase and at the N-terminus of the ATP phosphoribosyltransferase accessory subunit, HisZ. HisZ along with HisG catalyze the first reaction in histidine biosynthesis. HisZ is found only in a subset of bacteria and differs from HisRS in lacking a C-terminal anti-codon binding domain. |
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-45 Score=405.55 Aligned_cols=259 Identities=27% Similarity=0.481 Sum_probs=223.5
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
+...+|.+.+.||+|+||+||+|+++.++..||||.|.++.......+.+..|+++|+.++|||||++++|+.
T Consensus 7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~------- 79 (429)
T KOG0595|consen 7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIE------- 79 (429)
T ss_pred cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEe-------
Confidence 3468999999999999999999999999999999999877666677788999999999999999999999873
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...++|+|||||. |+|.++++..+.+++..++.++.||+.||++||
T Consensus 80 ---------------------------------~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~ 126 (429)
T KOG0595|consen 80 ---------------------------------DDDFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLH 126 (429)
T ss_pred ---------------------------------cCCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3568999999997 699999999999999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCC------CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC
Q 000993 537 GQGIIHRDLTPNNIFFDAR------NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~------~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 610 (1196)
+++||||||||+||||+.. -.+||+|||+|+.+.... ...+.||+|.|||||+++. .
T Consensus 127 ~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~----------------~a~tlcGSplYMAPEV~~~-~ 189 (429)
T KOG0595|consen 127 ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGS----------------MAETLCGSPLYMAPEVIMS-Q 189 (429)
T ss_pred HCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchh----------------HHHHhhCCccccCHHHHHh-c
Confidence 9999999999999999875 458999999999875332 1245799999999999987 6
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
+|+.|+|+||+|+|||+|++ ||......+............|......++...+|+...++.+|.+|.++.+-+.|+
T Consensus 190 ~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~ 269 (429)
T KOG0595|consen 190 QYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHP 269 (429)
T ss_pred cccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhh
Confidence 89999999999999999996 888777777766554444444444444556777999999999999999999999988
Q ss_pred CCCCch
Q 000993 688 LPPQME 693 (1196)
Q Consensus 688 ~~~~~~ 693 (1196)
+.....
T Consensus 270 ~l~~~p 275 (429)
T KOG0595|consen 270 FLAANP 275 (429)
T ss_pred hcccCc
Confidence 765543
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-45 Score=390.06 Aligned_cols=257 Identities=30% Similarity=0.477 Sum_probs=231.6
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.+++|+.++.||.|+||.|.+++++.+|..||+|++++... .....+...+|-.+|+.+.||+++++++.|.
T Consensus 42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~------- 114 (355)
T KOG0616|consen 42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFK------- 114 (355)
T ss_pred chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeec-------
Confidence 46899999999999999999999999999999999976542 3445677889999999999999999998873
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
+..++|+||||++ |.|..++++.++|+++.++.++.||+.||+|||
T Consensus 115 ---------------------------------d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH 161 (355)
T KOG0616|consen 115 ---------------------------------DNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLH 161 (355)
T ss_pred ---------------------------------cCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Confidence 4678999999997 589999999999999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
+++|++|||||+|||||.+|++||+|||+|+.+... +-+.||||.|+|||+++. ..|+.++
T Consensus 162 ~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r------------------T~TlCGTPeYLAPEii~s-k~ynkav 222 (355)
T KOG0616|consen 162 SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR------------------TWTLCGTPEYLAPEIIQS-KGYNKAV 222 (355)
T ss_pred hcCeeeccCChHHeeeccCCcEEEEeccceEEecCc------------------EEEecCCccccChHHhhc-CCCCcch
Confidence 999999999999999999999999999999976321 346799999999999998 5699999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCC-----CCHHHHHhccC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR-----PSATELLQDAL 688 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~R-----Pta~eiL~~~~ 688 (1196)
|+|||||++|||+. ||....+..+..+++..+..+|+.+ ++++++||+.+|+.|-.+| +...+|..|+|
T Consensus 223 DWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~f---s~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~w 299 (355)
T KOG0616|consen 223 DWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYF---SSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPW 299 (355)
T ss_pred hHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCccc---CHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcc
Confidence 99999999999995 9999999999999998888888765 4599999999999999999 46789999999
Q ss_pred CCCchHHHH
Q 000993 689 PPQMEYELL 697 (1196)
Q Consensus 689 ~~~~~~~~~ 697 (1196)
|....|..+
T Consensus 300 F~~v~W~~i 308 (355)
T KOG0616|consen 300 FKGVDWEAI 308 (355)
T ss_pred cccccHHHH
Confidence 999988755
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-45 Score=414.09 Aligned_cols=275 Identities=30% Similarity=0.510 Sum_probs=238.3
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~ 454 (1196)
.+..+||.+.+.||.|+|++|++|+.+.+++.||||++.++... ......+.+|-.+|.+| .||.|+++|..|
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TF----- 143 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTF----- 143 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEe-----
Confidence 34468999999999999999999999999999999998755422 12234677899999999 899999999887
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
++...+|+|+||++ |+|.++|++.+.|++..++.|+.||+.||+
T Consensus 144 -----------------------------------QD~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAle 188 (604)
T KOG0592|consen 144 -----------------------------------QDEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALE 188 (604)
T ss_pred -----------------------------------ecccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHH
Confidence 34678999999996 799999999999999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++|||||||||+|||+|.++++||+|||.|+.+......+... ........+..+++||..|.+||+|.. ...+
T Consensus 189 ylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~--~~~~~a~s~~~SFVGTAeYVSPElL~~-~~~~ 265 (604)
T KOG0592|consen 189 YLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENP--VDPNQASSRRSSFVGTAEYVSPELLND-SPAG 265 (604)
T ss_pred HHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhccccCc--cCcccccCcccceeeeecccCHHHhcC-CCCC
Confidence 9999999999999999999999999999999999887654332211 111112223467999999999999998 6789
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
+.+|+|+||||||+|+. ||.+..+.-++.+++.....+|+.++ +.+++||+++|..||.+|+|+.+|.+|+||.
T Consensus 266 ~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~~fp---~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~ 342 (604)
T KOG0592|consen 266 PSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPEGFP---EDARDLIKKLLVRDPSDRLTSQQIKAHPFFE 342 (604)
T ss_pred cccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCCCCC---HHHHHHHHHHHccCccccccHHHHhhCcccc
Confidence 99999999999999996 99999999999999888888888765 5899999999999999999999999999999
Q ss_pred CchHHHH
Q 000993 691 QMEYELL 697 (1196)
Q Consensus 691 ~~~~~~~ 697 (1196)
.+.|+.+
T Consensus 343 ~Vdw~nl 349 (604)
T KOG0592|consen 343 GVDWENL 349 (604)
T ss_pred cCChhhh
Confidence 9998863
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-46 Score=394.71 Aligned_cols=249 Identities=30% Similarity=0.558 Sum_probs=211.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeee-eeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQ-AWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~-~~~e~~~~~~~ 458 (1196)
+.+|.++++||+|+||+||++++..+|..+|.|.+.....+....+....|+.+|++|+|||||++++ .|.+
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~------- 90 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIE------- 90 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhc-------
Confidence 57899999999999999999999999999999999877677777889999999999999999999986 3321
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
+...++||||||+ |+|.++++. ...+++..+|+++.|+++||.
T Consensus 91 --------------------------------~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~ 138 (375)
T KOG0591|consen 91 --------------------------------DNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALY 138 (375)
T ss_pred --------------------------------cchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHH
Confidence 2345899999996 799998863 346999999999999999999
Q ss_pred HHHh--CC--CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 534 HIHG--QG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 534 yLHs--~g--IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
++|+ .. |+||||||.||+|+.+|.+||+|||+++.+.... ....+.+|||.||+||++.+
T Consensus 139 ~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~---------------tfA~S~VGTPyYMSPE~i~~- 202 (375)
T KOG0591|consen 139 HCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKT---------------TFAHSLVGTPYYMSPERIHE- 202 (375)
T ss_pred HHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchh---------------HHHHhhcCCCcccCHHHHhc-
Confidence 9999 44 9999999999999999999999999999875432 12356899999999999998
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCcc-ccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW-VAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~-~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
..|+.++||||+||++|||+. ||.+..-.+...+ ...+..||.+ ...+.++..||..|+.+||..||+.-.+++
T Consensus 203 ~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~K--I~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~ 280 (375)
T KOG0591|consen 203 SGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKK--IEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQ 280 (375)
T ss_pred CCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHH--HHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHH
Confidence 679999999999999999983 9988744333332 2356777666 456678999999999999999999655544
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-44 Score=411.40 Aligned_cols=278 Identities=28% Similarity=0.485 Sum_probs=229.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
-+++|+++++||+|+||.||+|+.+.||..||+|++++... .......+..|-.+|...++|+||++|.+|
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsF-------- 210 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSF-------- 210 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEe--------
Confidence 36899999999999999999999999999999999986552 333456788899999999999999999887
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
++..++|+||||++ |++..+|...+.+++..++.|+.+++.|+..||
T Consensus 211 --------------------------------QD~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH 258 (550)
T KOG0605|consen 211 --------------------------------QDKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIH 258 (550)
T ss_pred --------------------------------cCCCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHH
Confidence 45789999999997 599999999999999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhcccccccc----------------CCCCCCC-CCCcc-----------
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQ----------------DAAFPTD-TGGVS----------- 588 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~----------------~~~~~~~-~~~~~----------- 588 (1196)
++|+|||||||+|+|||..||+||+|||+|+-+....... ...++.. +....
T Consensus 259 ~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 338 (550)
T KOG0605|consen 259 QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWK 338 (550)
T ss_pred HcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHH
Confidence 9999999999999999999999999999997543211100 0111100 00000
Q ss_pred ----ccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhc--CCCCCccccCC
Q 000993 589 ----VDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKF 659 (1196)
Q Consensus 589 ----~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~ 659 (1196)
.-..+.+|||.|||||++.+ ..|+..+|+||||||+||||. ||....+.+...+++.-. ..+|.. ...+
T Consensus 339 ~nrr~~a~StVGTPDYiAPEVll~-kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~-~~~s 416 (550)
T KOG0605|consen 339 RNRRQLAYSTVGTPDYIAPEVLLG-KGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEE-VDLS 416 (550)
T ss_pred hhhhhhhhcccCCccccchHHHhc-CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCc-Cccc
Confidence 01135799999999999999 459999999999999999995 999988888877665533 334433 3456
Q ss_pred HHHHHHHHHcccCCCCCCC---CHHHHHhccCCCCchHHHHHH
Q 000993 660 SEQESLLRRLMSPSPSDRP---SATELLQDALPPQMEYELLDN 699 (1196)
Q Consensus 660 ~~l~~LI~~cL~~dP~~RP---ta~eiL~~~~~~~~~~~~~~~ 699 (1196)
+++++||.+||+ ||++|. +++||.+||||..+.|+.+..
T Consensus 417 ~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~~l~~ 458 (550)
T KOG0605|consen 417 DEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWDHLRE 458 (550)
T ss_pred HHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCcchhhc
Confidence 899999999999 999998 499999999999999986654
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-44 Score=404.12 Aligned_cols=260 Identities=31% Similarity=0.471 Sum_probs=214.6
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCcc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~ 455 (1196)
..++++|.++++||.|+||.||+|+.+.+|..||||.++.+..+.+.. .-+||++.|++|+ |||||++++++.++
T Consensus 6 ~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~-~nLREvksL~kln~hpniikL~Evi~d~--- 81 (538)
T KOG0661|consen 6 VIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEEC-MNLREVKSLRKLNPHPNIIKLKEVIRDN--- 81 (538)
T ss_pred hhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHH-HHHHHHHHHHhcCCCCcchhhHHHhhcc---
Confidence 456789999999999999999999999999999999998776664433 3468999999998 99999999888553
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|+|||||...|++++..+ ..|+++.++.|+.||++||+|
T Consensus 82 ------------------------------------~~~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~h 125 (538)
T KOG0661|consen 82 ------------------------------------DRILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAH 125 (538)
T ss_pred ------------------------------------CceEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHH
Confidence 2389999999999999999765 469999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
+|.+|+.||||||+|||+.....+||+|||+||.+... ...|.++.|.+|.|||+|.....|+.
T Consensus 126 iHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Sk----------------pPYTeYVSTRWYRAPEvLLrs~~Ys~ 189 (538)
T KOG0661|consen 126 IHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSK----------------PPYTEYVSTRWYRAPEVLLRSGYYSS 189 (538)
T ss_pred HHhcCcccccCChhheEecccceeEecccccccccccC----------------CCcchhhhcccccchHHhhhccccCC
Confidence 99999999999999999999999999999999975421 12366799999999999988788999
Q ss_pred cchhHHHHHHHHHhhc--C-CchhHHHHHHHHHh--h-----------------hcCCCCC--------ccccCCHHHHH
Q 000993 615 KADMYSLGIVFFELWH--P-FSTAMERQIVLSDL--K-----------------QKGELPP--------SWVAKFSEQES 664 (1196)
Q Consensus 615 ksDVwSlGviLyELlt--P-f~~~~~~~~~~~~l--~-----------------~~~~~p~--------~~~~~~~~l~~ 664 (1196)
+.||||+|||++|+++ | |.+..+.....++- . .+..+|. -.+..++++.+
T Consensus 190 pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~ 269 (538)
T KOG0661|consen 190 PVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAAS 269 (538)
T ss_pred chHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHH
Confidence 9999999999999975 4 33333333222111 0 0112221 12335678899
Q ss_pred HHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 665 LLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 665 LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||.+||+.||.+||||.++|+||||+.-
T Consensus 270 li~~ll~WDP~kRpTA~~al~~pffq~~ 297 (538)
T KOG0661|consen 270 LIERLLAWDPDKRPTASQALQHPFFQVG 297 (538)
T ss_pred HHHHHhcCCCccCccHHHHhcCcccccc
Confidence 9999999999999999999999999864
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-44 Score=379.63 Aligned_cols=257 Identities=28% Similarity=0.465 Sum_probs=212.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++.|+.+.++|+|+||.||+|+++.||+.||||++.-+..+....+-.+||+++|++|+|||+|.++++|-
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFr--------- 71 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFR--------- 71 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHH---------
Confidence 36789999999999999999999999999999999866666667778899999999999999999998882
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....+++|+|||+.++.+.+... ..++.+.+.++++|++.|+.|+|++
T Consensus 72 -------------------------------rkrklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~ 120 (396)
T KOG0593|consen 72 -------------------------------RKRKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKN 120 (396)
T ss_pred -------------------------------hcceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhc
Confidence 35678999999999888888765 4699999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
++|||||||+||||+.+|.+||||||+|+.+..+. -..+.++.|.+|.|||.+.|...|+..+||
T Consensus 121 n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg---------------d~YTDYVATRWYRaPELLvGDtqYG~pVDi 185 (396)
T KOG0593|consen 121 NCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG---------------DNYTDYVATRWYRAPELLVGDTQYGKPVDI 185 (396)
T ss_pred CeecccCChhheEEecCCcEEeccchhhHhhcCCc---------------chhhhhhhhhhccChhhhcccCcCCCcccc
Confidence 99999999999999999999999999999875322 113567899999999999998889999999
Q ss_pred HHHHHHHHHhhc--CCchhH-HHHHHHHHhhhcCC-------------------CCC---------ccccCCHHHHHHHH
Q 000993 619 YSLGIVFFELWH--PFSTAM-ERQIVLSDLKQKGE-------------------LPP---------SWVAKFSEQESLLR 667 (1196)
Q Consensus 619 wSlGviLyELlt--Pf~~~~-~~~~~~~~l~~~~~-------------------~p~---------~~~~~~~~l~~LI~ 667 (1196)
||+||++.||++ |..+.. +-.....+...-+. +|. ..+..+.-+.+|++
T Consensus 186 WAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k 265 (396)
T KOG0593|consen 186 WAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLK 265 (396)
T ss_pred hhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHH
Confidence 999999999997 544332 22222211111111 110 11223334679999
Q ss_pred HcccCCCCCCCCHHHHHhccCCCC
Q 000993 668 RLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
.||..||++|++-+++|.|++|.+
T Consensus 266 ~cL~~dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 266 KCLKMDPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred HHhcCCccccccHHHHhcChHHHH
Confidence 999999999999999999999944
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-43 Score=409.32 Aligned_cols=288 Identities=26% Similarity=0.366 Sum_probs=238.1
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~ 454 (1196)
...+++|.++++||+|+||+|+++..+.+++.||||++++... .....+..+.|..++... +||.++.++.+|
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~f----- 438 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCF----- 438 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccc-----
Confidence 4568999999999999999999999999999999999987653 344567788899988888 599999999887
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
+...++|+||||+.|+-..+++..+.|++..++.|+..|+.||.|
T Consensus 439 -----------------------------------QT~~~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~f 483 (694)
T KOG0694|consen 439 -----------------------------------QTKEHLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQF 483 (694)
T ss_pred -----------------------------------ccCCeEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHH
Confidence 457899999999976334455566889999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||||||||.+|||+|.+|++||+|||+++..-.. ...+++.||||.|||||++.+ ..|+.
T Consensus 484 LH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~---------------g~~TsTfCGTpey~aPEil~e-~~Yt~ 547 (694)
T KOG0694|consen 484 LHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ---------------GDRTSTFCGTPEFLAPEVLTE-QSYTR 547 (694)
T ss_pred HHhcCceeeecchhheEEcccCcEEecccccccccCCC---------------CCccccccCChhhcChhhhcc-Ccccc
Confidence 99999999999999999999999999999999853111 123567899999999999999 78999
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhc
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQD 686 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~ 686 (1196)
++|||||||+||||+. ||.+.++.++.-.++.....+|.. .+.++.++++++|..||.+|.. +++|.+|
T Consensus 548 aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~---ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~h 624 (694)
T KOG0694|consen 548 AVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRF---LSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKH 624 (694)
T ss_pred hhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCc---ccHHHHHHHHHHhccCcccccCCCCCCchhhhhC
Confidence 9999999999999995 999999999988888766665543 3459999999999999999985 6889999
Q ss_pred cCCCCchHHHHHHHHHhcCCCCCCcchhhhccccccchh
Q 000993 687 ALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEET 725 (1196)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~e~~ 725 (1196)
|||..+.|+.+. .+.+.++-...+..+..-+-||++-
T Consensus 625 pFFr~i~w~~L~--~r~i~PPf~P~i~~~~D~snFd~eF 661 (694)
T KOG0694|consen 625 PFFRSIDWDDLL--NRRIKPPFVPTIKGPEDVSNFDEEF 661 (694)
T ss_pred CccccCCHHHHh--hccCCCCCCcccCChhhhcccchhh
Confidence 999999987553 3344444434444333334444443
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-43 Score=395.31 Aligned_cols=266 Identities=27% Similarity=0.437 Sum_probs=221.4
Q ss_pred CCCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecC
Q 000993 374 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 453 (1196)
Q Consensus 374 ~~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~ 453 (1196)
....+..+.|+.+++||+|.||.||+|++..+|+.||+|+++...........+.||+.+|++|+||||+++.+..++.
T Consensus 110 ~w~~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~- 188 (560)
T KOG0600|consen 110 GWGPRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK- 188 (560)
T ss_pred cccccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec-
Confidence 3445667899999999999999999999999999999999988765556667789999999999999999999876542
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL 532 (1196)
....+|+|+|||+.+|..++... -.|++.++..|+.||+.||
T Consensus 189 -------------------------------------~~~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl 231 (560)
T KOG0600|consen 189 -------------------------------------LSGSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGL 231 (560)
T ss_pred -------------------------------------CCceEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHH
Confidence 13568999999999999998764 4799999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||++||+|||||.+|||||.+|.+||+|||+|+++.... ....++.+-|.+|.|||.|.|...|
T Consensus 232 ~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~--------------~~~~T~rVvTLWYRpPELLLG~t~Y 297 (560)
T KOG0600|consen 232 EYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG--------------SAPYTSRVVTLWYRPPELLLGATSY 297 (560)
T ss_pred HHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCC--------------CcccccceEEeeccChHHhcCCccc
Confidence 99999999999999999999999999999999999865332 1235788999999999999998889
Q ss_pred CCcchhHHHHHHHHHhhc--C-CchhHHHHHHHHHhhhcCCCCC-ccc-------------------------cCCHHHH
Q 000993 613 DEKADMYSLGIVFFELWH--P-FSTAMERQIVLSDLKQKGELPP-SWV-------------------------AKFSEQE 663 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt--P-f~~~~~~~~~~~~l~~~~~~p~-~~~-------------------------~~~~~l~ 663 (1196)
+.++|+||.||||.||+. | |.+..+.+....+....+...+ .|. ..++.+.
T Consensus 298 g~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l 377 (560)
T KOG0600|consen 298 GTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASAL 377 (560)
T ss_pred ccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHH
Confidence 999999999999999996 4 4455554444443332222110 111 1234567
Q ss_pred HHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 664 SLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 664 ~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
+|+..||+.||.+|.||.++|++.||..
T Consensus 378 ~Ll~~lL~ldP~kR~tA~~aL~seyF~t 405 (560)
T KOG0600|consen 378 DLLEKLLSLDPDKRGTASSALQSEYFTT 405 (560)
T ss_pred HHHHHHhccCccccccHHHHhcCccccc
Confidence 8999999999999999999999999944
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-42 Score=383.95 Aligned_cols=264 Identities=26% Similarity=0.372 Sum_probs=223.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++..+||.|..++||+|++..++..||||++++..+... .+.+.+|+..|+.++||||++++.+|+.
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv------- 95 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVV------- 95 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEe-------
Confidence 45899999999999999999999999999999999998877654 6789999999999999999999998853
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|+||.||. |++.+++... ..++|..+..++++++.||.||
T Consensus 96 ---------------------------------~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YL 142 (516)
T KOG0582|consen 96 ---------------------------------DSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYL 142 (516)
T ss_pred ---------------------------------cceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHH
Confidence 457899999996 7999999764 4599999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchh-ccCCCCCCC
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI-EQGWPKIDE 614 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~-l~~~~~~s~ 614 (1196)
|.+|.||||||+.||||+++|.|||+|||.+..+...... ...+....+|||+|||||+ .+....|+.
T Consensus 143 H~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R-----------~~~rf~tfvgtp~wmAPEvl~q~~~GYdf 211 (516)
T KOG0582|consen 143 HQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDR-----------QVTRFNTFVGTPCWMAPEVLMQQLHGYDF 211 (516)
T ss_pred HhcCceecccccccEEEcCCCcEEEcCceeeeeecccCce-----------eeEeeccccCcccccChHHhhhcccCccc
Confidence 9999999999999999999999999999999876543200 0111167899999999999 444456999
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-------ccccCCHHHHHHHHHcccCCCCCCCCHHHHH
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-------SWVAKFSEQESLLRRLMSPSPSDRPSATELL 684 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-------~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL 684 (1196)
|+|||||||+..||.+ ||....+++..+..+......+. .....+..++.+|..||..||.+|||++++|
T Consensus 212 KaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLl 291 (516)
T KOG0582|consen 212 KADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLL 291 (516)
T ss_pred hhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHh
Confidence 9999999999999996 99999998888877764433211 1112234678999999999999999999999
Q ss_pred hccCCCCchH
Q 000993 685 QDALPPQMEY 694 (1196)
Q Consensus 685 ~~~~~~~~~~ 694 (1196)
+|+||++...
T Consensus 292 kh~FFk~~k~ 301 (516)
T KOG0582|consen 292 KHAFFKKAKS 301 (516)
T ss_pred ccHHHhhccc
Confidence 9999998753
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-42 Score=398.68 Aligned_cols=256 Identities=30% Similarity=0.522 Sum_probs=219.2
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC---chhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecC
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---LPVNDRILREVATLSRLQ-HQHVVRYYQAWFETG 453 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~---~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~ 453 (1196)
...+.|.+.+.||+|+||+|++|.+..+|..||||+++..... ......+.+|+.+++.++ ||||++++.++.
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~--- 90 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFA--- 90 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEe---
Confidence 3457899999999999999999999999999999987654211 234567779999999998 999999998872
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL 532 (1196)
....+|+|||||. |+|.+.+...+++.+.++++++.||++|+
T Consensus 91 -------------------------------------t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav 133 (370)
T KOG0583|consen 91 -------------------------------------TPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAV 133 (370)
T ss_pred -------------------------------------cCCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHH
Confidence 2456999999997 59999999999999999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCC-CCeEEeccCcchhcc-ccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLK-LEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~-~~vKL~DFGlA~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 610 (1196)
+|||++||+||||||+|||++.+ +++||+|||+++... .. -...+.|||+.|+|||++.+..
T Consensus 134 ~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~----------------~~l~t~cGsp~Y~aPEvl~~~~ 197 (370)
T KOG0583|consen 134 AYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGED----------------GLLKTFCGSPAYAAPEVLSGKG 197 (370)
T ss_pred HHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCCC----------------CcccCCCCCcccCCHHHhCCCC
Confidence 99999999999999999999999 999999999998652 11 1235679999999999999965
Q ss_pred CC-CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 611 KI-DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 611 ~~-s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.| +.++||||+||+||.|++ ||...........+......+|.... ++++++|+++||..||.+|+|+.+|+.|
T Consensus 198 ~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~--S~~~~~Li~~mL~~~P~~R~t~~~i~~h 275 (370)
T KOG0583|consen 198 TYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLL--SPEARSLIEKMLVPDPSTRITLLEILEH 275 (370)
T ss_pred CcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcC--CHHHHHHHHHHcCCCcccCCCHHHHhhC
Confidence 25 589999999999999997 99886666666665555555555443 7899999999999999999999999999
Q ss_pred cCCCC
Q 000993 687 ALPPQ 691 (1196)
Q Consensus 687 ~~~~~ 691 (1196)
+||+.
T Consensus 276 ~w~~~ 280 (370)
T KOG0583|consen 276 PWFQK 280 (370)
T ss_pred hhhcc
Confidence 99997
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-43 Score=395.74 Aligned_cols=253 Identities=27% Similarity=0.422 Sum_probs=222.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|.+.+.||+|+||.||+|+.+.+.+.||+|.+.+........+.+.+|+++++.++|||||.+++.|
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esf---------- 70 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESF---------- 70 (808)
T ss_pred CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhh----------
Confidence 4689999999999999999999999999999999987777777788899999999999999999999765
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
+...++|+|.|||.|+|..++...+.++++.++.++.|+++||.|||+++
T Consensus 71 ------------------------------Et~~~~~vVte~a~g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~r 120 (808)
T KOG0597|consen 71 ------------------------------ETSAHLWVVTEYAVGDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNR 120 (808)
T ss_pred ------------------------------cccceEEEEehhhhhhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 34678999999999999999999999999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+|||+||.|||++..+++|+||||+|+....+. ...++..|||.|||||++.+ ..|+..+|+|
T Consensus 121 ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t---------------~vltsikGtPlYmAPElv~e-~pyd~~sDlW 184 (808)
T KOG0597|consen 121 ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT---------------SVLTSIKGTPLYMAPELVEE-QPYDHTSDLW 184 (808)
T ss_pred cccccCCcceeeecCCCceeechhhhhhhcccCc---------------eeeeeccCcccccCHHHHcC-CCccchhhHH
Confidence 9999999999999999999999999999754321 22356789999999999998 6799999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
|+|||+|||++ ||....-.+....+.......|+ ..++.+.+|++.+|.+||.+|.|+.+++.|+|.+.
T Consensus 185 slGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~---~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~ 256 (808)
T KOG0597|consen 185 SLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPS---TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKG 256 (808)
T ss_pred HHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcc---cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhh
Confidence 99999999996 88777666665555543333332 66789999999999999999999999999997654
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-42 Score=360.85 Aligned_cols=258 Identities=28% Similarity=0.457 Sum_probs=214.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.+|..+++||+|.||.||+|++..+|+.||||+|+..+..........||++.|+.++||||+.++++|.+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~--------- 72 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPH--------- 72 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccC---------
Confidence 46788899999999999999999999999999999887766677889999999999999999999998832
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+.||+||++.+|..+++.. ..++..++..|+.++++||+|||++.
T Consensus 73 -------------------------------~~~l~lVfEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~ 121 (318)
T KOG0659|consen 73 -------------------------------KSNLSLVFEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKW 121 (318)
T ss_pred -------------------------------CCceEEEEEeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhh
Confidence 4567899999999999999754 46999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||.|+||+++|.+||+|||+|+.+..+.. ..+..+-|.+|.|||.+-|...|+..+|||
T Consensus 122 IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~---------------~~~~~V~TRWYRAPELLfGsr~Yg~~VDmW 186 (318)
T KOG0659|consen 122 ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR---------------IQTHQVVTRWYRAPELLFGSRQYGTGVDMW 186 (318)
T ss_pred hhcccCCccceEEcCCCcEEeecccchhccCCCCc---------------ccccceeeeeccChHHhccchhcCCcchhh
Confidence 99999999999999999999999999998754331 123348899999999999988999999999
Q ss_pred HHHHHHHHhhc--CCchhHHHHHHH-HHhhhcCC--------------------CCC-----ccccCCHHHHHHHHHccc
Q 000993 620 SLGIVFFELWH--PFSTAMERQIVL-SDLKQKGE--------------------LPP-----SWVAKFSEQESLLRRLMS 671 (1196)
Q Consensus 620 SlGviLyELlt--Pf~~~~~~~~~~-~~l~~~~~--------------------~p~-----~~~~~~~~l~~LI~~cL~ 671 (1196)
|.|||+.||+- ||.+....-..+ .+.+.-+. .|. .++..++++.+|+..||.
T Consensus 187 avGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ 266 (318)
T KOG0659|consen 187 AVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLT 266 (318)
T ss_pred hHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhc
Confidence 99999999984 776443322222 11111110 111 122344567899999999
Q ss_pred CCCCCCCCHHHHHhccCCCCch
Q 000993 672 PSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 672 ~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
.||.+|+|+.|+|+|+||.+..
T Consensus 267 ynP~~Rita~qaL~~~yf~~~P 288 (318)
T KOG0659|consen 267 YNPKKRITASQALKHPYFKSLP 288 (318)
T ss_pred cCchhcccHHHHhcchhhhcCC
Confidence 9999999999999999988653
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=392.03 Aligned_cols=249 Identities=33% Similarity=0.482 Sum_probs=210.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcE-EEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRH-YAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~-vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++...+.||.|+||+||+|.|+ |+. ||||++.....+......|.+|+.+|++++|||||+++|+|.+.
T Consensus 40 ~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~------ 111 (362)
T KOG0192|consen 40 PDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSP------ 111 (362)
T ss_pred hHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC------
Confidence 345566677999999999999997 777 99999986655545577899999999999999999999998432
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...++|||||++ |+|.++++. ...++...+..++.|||+||.||
T Consensus 112 ---------------------------------~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YL 158 (362)
T KOG0192|consen 112 ---------------------------------PGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYL 158 (362)
T ss_pred ---------------------------------CCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHH
Confidence 115799999997 699999987 57899999999999999999999
Q ss_pred HhCC-CcccCCCcCcEEecCCC-CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC-CCCC
Q 000993 536 HGQG-IIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG-WPKI 612 (1196)
Q Consensus 536 Hs~g-IiHrDLKp~NILld~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~~ 612 (1196)
|+++ ||||||||+|||++.++ ++||+|||+++...... ...+...||+.|||||++.+ ...|
T Consensus 159 H~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~---------------~~~~~~~GT~~wMAPEv~~~~~~~~ 223 (362)
T KOG0192|consen 159 HSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK---------------TSMTSVAGTYRWMAPEVLRGEKSPY 223 (362)
T ss_pred hcCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc---------------ccccCCCCCccccChhhhcCCCCcC
Confidence 9999 99999999999999997 99999999998653211 12344689999999999995 2579
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
+.|+|||||||+||||+| ||......+...... .....|+......+.+..||.+||..||.+||++.+|+.
T Consensus 224 ~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~-~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 224 TEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVV-VGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred CccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHH-hcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 999999999999999997 999888844444433 355556555557889999999999999999999999985
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-42 Score=368.80 Aligned_cols=268 Identities=27% Similarity=0.402 Sum_probs=218.0
Q ss_pred CCCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecC
Q 000993 374 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 453 (1196)
Q Consensus 374 ~~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~ 453 (1196)
+...+.+++|+.+..|++|+||.||+|+++.|++.||+|+++........--.-+||+.+|.+++|||||.+-.+.+-.
T Consensus 69 l~gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~- 147 (419)
T KOG0663|consen 69 LGGCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGS- 147 (419)
T ss_pred ccCcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecc-
Confidence 5567778999999999999999999999999999999999987654333334578999999999999999998775321
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL 532 (1196)
+-..+|||||||..+|..++.... +|...++..++.|+++|+
T Consensus 148 -------------------------------------~~d~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~gl 190 (419)
T KOG0663|consen 148 -------------------------------------NMDKIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGL 190 (419)
T ss_pred -------------------------------------ccceeeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHH
Confidence 235689999999999999998765 899999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||++.|+||||||+|+|++..|.+||+|||+|+.+..+- -..+..+-|.+|.|||.|.|...|
T Consensus 191 k~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~---------------k~~T~lVVTLWYRaPELLLG~~ty 255 (419)
T KOG0663|consen 191 KHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL---------------KPYTPLVVTLWYRAPELLLGAKTY 255 (419)
T ss_pred HHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCc---------------ccCcceEEEeeecCHHHhcCCccc
Confidence 99999999999999999999999999999999999875432 124667899999999999998899
Q ss_pred CCcchhHHHHHHHHHhhc--C-CchhHHHHHHHHHhhhcCC-------------------CCCc--------cc--cCCH
Q 000993 613 DEKADMYSLGIVFFELWH--P-FSTAMERQIVLSDLKQKGE-------------------LPPS--------WV--AKFS 660 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt--P-f~~~~~~~~~~~~l~~~~~-------------------~p~~--------~~--~~~~ 660 (1196)
+.+.||||+|||+.||++ | |.+..+.....++...-+. ++.. +. ..+.
T Consensus 256 st~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse 335 (419)
T KOG0663|consen 256 STAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSE 335 (419)
T ss_pred CcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccch
Confidence 999999999999999996 4 3344333333222221111 0100 00 0123
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHhccCCCCchH
Q 000993 661 EQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 661 ~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~ 694 (1196)
...+|+..+|..||.+|.||++.|+|.||.....
T Consensus 336 ~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~ 369 (419)
T KOG0663|consen 336 QGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPL 369 (419)
T ss_pred hHHHHHHHHhccCccccccHHHhhcccccccCCC
Confidence 4578999999999999999999999999987543
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-41 Score=395.14 Aligned_cols=258 Identities=31% Similarity=0.502 Sum_probs=228.8
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecC-CCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK-DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~-~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
.++.-|++.+.||+|+-|.|.+|+|..||+.+|||+|... ..+......+.+|+-+|+-+.||||+++|++|.
T Consensus 9 ~tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe------ 82 (786)
T KOG0588|consen 9 NTIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWE------ 82 (786)
T ss_pred ccccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeec------
Confidence 3456789999999999999999999999999999999866 344444567889999999999999999999983
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
+..++|+|.||++ |.|.+++...+++++.++.+++.||+.|+.||
T Consensus 83 ----------------------------------~~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yC 128 (786)
T KOG0588|consen 83 ----------------------------------NKQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYC 128 (786)
T ss_pred ----------------------------------cCceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHH
Confidence 3578999999996 68999999999999999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|..+|+||||||+|+|||..+++||+|||+|..-..+. ...+.||.|.|+|||++.|.++.+.+
T Consensus 129 H~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk----------------lLeTSCGSPHYA~PEIV~G~pYdG~~ 192 (786)
T KOG0588|consen 129 HAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK----------------LLETSCGSPHYAAPEIVSGRPYDGRP 192 (786)
T ss_pred hhhcceeccCCchhhhhhcccCEeeeccceeecccCCc----------------cccccCCCcccCCchhhcCCCCCCCc
Confidence 99999999999999999999999999999997532221 12456999999999999998777899
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
+||||.|||||.|++ ||.+..-+....+.......+|. .+++++++||++||..||.+|.|.++|++|||....
T Consensus 193 sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs---~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~ 269 (786)
T KOG0588|consen 193 SDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPS---NISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGY 269 (786)
T ss_pred cccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCC---cCCHHHHHHHHHHhccCccccccHHHHhhCchhhcC
Confidence 999999999999998 99988888888888777777774 567799999999999999999999999999998776
Q ss_pred hH
Q 000993 693 EY 694 (1196)
Q Consensus 693 ~~ 694 (1196)
..
T Consensus 270 ~~ 271 (786)
T KOG0588|consen 270 TS 271 (786)
T ss_pred CC
Confidence 43
|
|
| >TIGR00418 thrS threonyl-tRNA synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=410.24 Aligned_cols=348 Identities=13% Similarity=0.055 Sum_probs=274.8
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec--CCCcccccceEEEeecCCceEeecCCCcHHH
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELRLPF 813 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRPD~T~~i 813 (1196)
.+.|+.||+|.++.+++.|++.+++.+.++||++|.||+| ++. ++.+...++||+|.|.+|+.++|||+.|+++
T Consensus 188 ~~~G~~~~~p~g~~~~~~i~~~~~~~~~~~G~~ev~tP~l~~~~l~~~sg~~~~~~~emy~~~d~~~~~~~LrP~~~~~i 267 (563)
T TIGR00418 188 IGPGLPFWLPKGATIRNLLEDFVRQKQIKYGYMEVETPIMYDLELWEISGHWDNYKERMFPFTELDNREFMLKPMNCPGH 267 (563)
T ss_pred cCCcceEEeccHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHHhcCCcccchhhcceeccCCCceEEEecCCCHHH
Confidence 4799999999999999999999999999999999999999 332 3467789999999999999999999999999
Q ss_pred HHHHHhCC----CCceeEEEecCeeecCCCCC-----CCcceeEeEEEEeCCCCccchHH---HHHHHHHHHHHcCCCCc
Q 000993 814 IRWAISNQ----KSSFKRYEISSVYRRAIGHS-----PPNRYLQGDFDIIGGASALTEAE---VLKVTMDIVTRFFHAES 881 (1196)
Q Consensus 814 aR~~a~~~----~~P~r~~Y~G~VfR~e~~~~-----~~~ef~Q~GvEiiG~~~~~aDaE---vI~la~~~L~~lgi~~~ 881 (1196)
+|+++.+. ..|+|+||+|+|||+|.... |.|+|+|.|+|+||. ...+|+| +|.++.++++.||+..
T Consensus 268 ~~~~~~~~~s~~~lP~rl~~~g~~fR~E~~g~~~Gl~R~reF~q~~~~~~~~-~~~~~~e~~~~i~~~~~~~~~lgl~~- 345 (563)
T TIGR00418 268 FLIFKSSLRSYRDLPLRIAELGYSHRYEQSGELHGLMRVRGFTQDDAHIFCT-EDQIKEEFKNQFRLIQKVYSDFGFSF- 345 (563)
T ss_pred HHHHhCcCCChHHCCceeeEeccccCCCCCcCCcCcccccceEEeeeEEEcC-HHHHHHHHHHHHHHHHHHHHHcCCCe-
Confidence 99998753 35999999999999986542 556799999999998 5667776 9999999999999985
Q ss_pred eEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCC
Q 000993 882 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 961 (1196)
Q Consensus 882 ~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~ 961 (1196)
+.+++|.... . +.++-+..+.. .
T Consensus 346 ~~~~l~~~~~-~---~~~~~~~~~~~---------------------------------------~-------------- 368 (563)
T TIGR00418 346 DKYELSTRDP-E---DFIGEDELWEK---------------------------------------A-------------- 368 (563)
T ss_pred EEEEEeCCCh-h---hhcCCHHHHHH---------------------------------------H--------------
Confidence 8898885211 0 01111000000 0
Q ss_pred hhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccc-ccccccccccc
Q 000993 962 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLV-EGTLLAVGGRY 1040 (1196)
Q Consensus 962 ~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~-~~~~I~~GGRY 1040 (1196)
...+. + .|..+|+ .+.+|.+ ||++||+.++|++ ....+..-+.+ .+..+++||||
T Consensus 369 ----~~~~~----------~-----~l~~~~i--~~~~~~~--~g~~y~~~~~f~~-~~~lg~~~~~~t~q~~~~~g~ry 424 (563)
T TIGR00418 369 ----EAALE----------E-----ALKELGV--PYEIDPG--RGAFYGPKIDFAF-KDALGREWQCATVQLDFELPERF 424 (563)
T ss_pred ----HHHHH----------H-----HHHhCCC--ceEEcCC--CcceecceEEEEe-ecCCCCceeeceeeeccCCHhhc
Confidence 00000 0 2344555 4667887 9999999999996 44333210111 13458999999
Q ss_pred chh-hhhccccccccccCCCCCCCcc---eecccHHHHHhhccC---CCCCCCCCCCceEEEEEcCCCchHHHHHHHHHH
Q 000993 1041 DYL-LHRMWDREYVGYASRTNPPSGV---GASLALETIIQHYPV---DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAE 1113 (1196)
Q Consensus 1041 D~L-~~~fg~~~~~~~~g~~~~~pAv---Gfaiglerl~~~L~~---~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~ 1113 (1196)
|.+ ....|++ ..|++ ||++|+|||+.+|.+ ...+ ....+.+|+|++.+ +....+|+++++.
T Consensus 425 d~~~~~~~g~~----------~~p~ii~~Gfa~gieRli~~l~e~~~~~~p-~~~~p~~v~vi~~~-~~~~~~a~~ia~~ 492 (563)
T TIGR00418 425 DLTYVDEDNEE----------KRPVMIHRAILGSIERFIAILLEKYAGNFP-LWLAPVQVVVIPVN-ERHLDYAKKVAQK 492 (563)
T ss_pred CCEEECCCCCE----------EeeEEEEeeccCcHHHHHHHHHHhccCCCC-CcCCCceEEEEEcc-chHHHHHHHHHHH
Confidence 995 5665543 35885 999999999988842 2122 22467889999986 6778899999999
Q ss_pred HHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHH
Q 000993 1114 LWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLD 1183 (1196)
Q Consensus 1114 Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~ 1183 (1196)
||++|++|+++.. ++++++++++|++.|+|++|++|++|+++|+|+||||.+|+|..++++++++.+++
T Consensus 493 LR~~Gi~v~~d~~-~~sl~~q~k~A~~~g~~~~iiiG~~E~~~~~v~vk~~~~g~q~~v~~~el~~~i~~ 561 (563)
T TIGR00418 493 LKKAGIRVDVDDR-NERLGKKIREAQKQKIPYMLVVGDKEMESLAVNVRTRKGQKLEKMSLDEFLEKLRK 561 (563)
T ss_pred HHHcCCEEEEECC-CCCHHHHHHHHHhcCCCEEEEEchhhhhCCeEEEEECCCCccceeeHHHHHHHHHh
Confidence 9999999998876 67999999999999999999999999999999999999999999999999888764
|
This model represents the threonyl-tRNA synthetase found in most organisms. This protein is a class II tRNA synthetase, and is recognized by the pfam model tRNA-synt_2b. Note that B. subtilis has closely related isozymes thrS and thrZ. The N-terminal regions are quite dissimilar between archaeal and eubacterial forms, while some eukaryotic forms are missing sequence there altogether.. |
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-41 Score=378.93 Aligned_cols=261 Identities=34% Similarity=0.530 Sum_probs=212.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.++...+.||+|+||.||++.+..+|..+|||.+...... ..+.+.+|+.+|++++|||||+++|.....
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~--~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~-------- 86 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSP--TSESLEREIRILSRLNHPNIVQYYGSSSSR-------- 86 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccch--hHHHHHHHHHHHHhCCCCCEEeeCCccccc--------
Confidence 4677889999999999999999999999999998765222 266789999999999999999999763110
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
+...++|.|||++ |+|.+++...+ .++++.++.++.||++||+|||++
T Consensus 87 ------------------------------~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~ 136 (313)
T KOG0198|consen 87 ------------------------------ENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK 136 (313)
T ss_pred ------------------------------cCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 0146899999997 69999999877 799999999999999999999999
Q ss_pred CCcccCCCcCcEEecC-CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 539 GIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 539 gIiHrDLKp~NILld~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
|||||||||+|||++. ++.+||+|||+++...... ..........||+.|||||++.......+++|
T Consensus 137 g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~------------~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sD 204 (313)
T KOG0198|consen 137 GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG------------TKSDSELSVQGTPNYMAPEVIRNGEVARRESD 204 (313)
T ss_pred CEeccCcccceEEEeCCCCeEEeccCcccccccccc------------ccccccccccCCccccCchhhcCCCcCCccch
Confidence 9999999999999999 7999999999998754200 00112345789999999999985223345999
Q ss_pred hHHHHHHHHHhhc---CCch-hHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 618 MYSLGIVFFELWH---PFST-AMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~-~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||||||++.||+| ||.. ....+....+.... ..|..+...+++++++|.+|+..||.+||||.++|+|+|..+..
T Consensus 205 iWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~-~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 205 IWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRED-SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS 283 (313)
T ss_pred hhhcCCEEEeccCCCCcchhhcchHHHHHHHhccC-CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence 9999999999998 6665 33344444444433 45555566788999999999999999999999999999988765
Q ss_pred H
Q 000993 694 Y 694 (1196)
Q Consensus 694 ~ 694 (1196)
.
T Consensus 284 ~ 284 (313)
T KOG0198|consen 284 I 284 (313)
T ss_pred c
Confidence 3
|
|
| >PRK12294 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-40 Score=366.23 Aligned_cols=256 Identities=14% Similarity=0.151 Sum_probs=196.7
Q ss_pred hhhHhhHHHHHHHHHHHHHcCCccccccceeec----CCCcccccceEE-EeecCCceEeecCCCcHHHHHHHHhCCCCc
Q 000993 750 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLL----GDCPQFKRNTVK-LLTHGGDLLELSHELRLPFIRWAISNQKSS 824 (1196)
Q Consensus 750 ~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~----~~~~~~~~~my~-f~D~~G~~laLRPD~T~~iaR~~a~~~~~P 824 (1196)
.....++.+++.++++|++|||++|.||+|++. ..++.....+++ |.|.+||.++||||+|+||||+++++...|
T Consensus 5 ~~~~~~~~ie~~l~~~f~~~GY~~I~tP~~E~~d~~~~~~~~~~~~~~~~~~~~~Gr~laLRpD~T~~iAR~~a~~~~~~ 84 (272)
T PRK12294 5 EQLIALKESETAFLKYFNKADYELVDFSVIEKLDWKQLNHEDLQQMGERSFWQHEHQIYALRNDFTDQLLRYYSMYPTAA 84 (272)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCeEeeCCcchhHHhhhccccchhhhheeeeecCCCCEEEEcCCCCHHHHHHHHhcCCCC
Confidence 345667899999999999999999999999322 224344455555 446689999999999999999998765567
Q ss_pred eeEEEecCeeecCCCCCCCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceE-EEeCcHHHHHHHHHHcCCCH
Q 000993 825 FKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCD-IHLNHGDLLEAIWSWAGIKA 903 (1196)
Q Consensus 825 ~r~~Y~G~VfR~e~~~~~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~-i~Lg~~~i~~~~l~~lgl~~ 903 (1196)
.|+||+|+|||++++ ++|+|||+|| .+..+|+|+|.+|++++..+|..+ +. |+|||++|++++++. +
T Consensus 85 ~Rl~Y~g~VfR~~~~------~~Q~GvEliG-~~~~a~~e~l~la~~~l~~~g~~~-~~~i~lGh~~~~~~l~~~----~ 152 (272)
T PRK12294 85 TKVAYAGLIIRNNEA------AVQVGIENYA-PSLANVQQSFKLFIQFIQQQLRDN-VHFVVLGHYQLLDALLDK----S 152 (272)
T ss_pred ceEEEeccEeccCCC------cceeceEEEC-CCchhHHHHHHHHHHHHHHhCCCC-CcEEEeccHHHHHHHHhC----H
Confidence 799999999998643 8999999999 447999999999999999998765 53 899999999999984 5
Q ss_pred HHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChHHHHHH
Q 000993 904 EHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKAL 983 (1196)
Q Consensus 904 ~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l 983 (1196)
+.+++++++|.++|.. ++ ++++... ..+..++.. ...++++++..+........+.|
T Consensus 153 ~~~~~l~~~l~~Kn~~------------~l-~~~l~~~-------~~l~~~l~~---~~~~~l~~a~~l~~~~~~~~~~L 209 (272)
T PRK12294 153 LQTPDILSMIEERNLS------------GL-VTYLSTE-------HPIVQILKE---NTQQQLNVLEHYIPNDHPALVEL 209 (272)
T ss_pred HHHHHHHHHHHhcCHH------------HH-HHHHhhh-------hhHHHHHHh---chHHHHHHHHHhhhhhHHHHHHH
Confidence 6778899999998832 22 2333211 112233321 22457777777554333445555
Q ss_pred HHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchhhhhccc
Q 000993 984 DEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWD 1049 (1196)
Q Consensus 984 ~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~ 1049 (1196)
..| .++..++. .+.||++++|+++||||+||++|.++.+. +|++|||||+|+++||.
T Consensus 210 ~~l~~~l~~~~~~-~i~~Dl~~~r~~~YYTG~vF~~y~~~~~~--------~i~~GGRYD~Ll~~Fg~ 268 (272)
T PRK12294 210 KIWERWLHTQGYK-DIHLDITAQPPRSYYTGLFIQCHFAENES--------RVLTGGYYKGSIEGFGL 268 (272)
T ss_pred HHHHHHHHhcCCC-eEEEcccccCCCCCcCCeEEEEEECCCCC--------cccCCcCchhHHHhcCC
Confidence 555 56666765 49999999999999999999999987654 69999999999999964
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-43 Score=361.28 Aligned_cols=259 Identities=27% Similarity=0.449 Sum_probs=227.5
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.+.++|++-+.||+|+|+.||++.+..+|+.+|+|+++.+.-+....+++.+|+.+.+.|+|||||+++..+
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti-------- 79 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-------- 79 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhh--------
Confidence 456889999999999999999999999999999999988776666788999999999999999999998654
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
++..+.|+|+|++.| +|..-+..+..+++..+..++.||+++|.|+|
T Consensus 80 --------------------------------~~~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH 127 (355)
T KOG0033|consen 80 --------------------------------QEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCH 127 (355)
T ss_pred --------------------------------cccceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 235678999999975 78777776677899999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCC---CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 537 GQGIIHRDLTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~---~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
.+||||||+||+|+++-+.. -+||+|||+|..+.... ..-+++|||.|||||++.. ..|+
T Consensus 128 ~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~----------------~~~G~~GtP~fmaPEvvrk-dpy~ 190 (355)
T KOG0033|consen 128 SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGE----------------AWHGFAGTPGYLSPEVLKK-DPYS 190 (355)
T ss_pred hcCceeccCChhheeeeeccCCCceeecccceEEEeCCcc----------------ccccccCCCcccCHHHhhc-CCCC
Confidence 99999999999999996543 49999999998764111 1346799999999999998 5699
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
..+|||+.|||||-|+. ||++.+.......+.......|+ .|...++++++||++||..||.+|.|+.+.|+|||.
T Consensus 191 kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi 270 (355)
T KOG0033|consen 191 KPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWI 270 (355)
T ss_pred CcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchh
Confidence 99999999999999985 99998777777777777777665 999999999999999999999999999999999999
Q ss_pred CCch
Q 000993 690 PQME 693 (1196)
Q Consensus 690 ~~~~ 693 (1196)
.+-.
T Consensus 271 ~~r~ 274 (355)
T KOG0033|consen 271 CNRE 274 (355)
T ss_pred cchH
Confidence 8764
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-41 Score=370.51 Aligned_cols=273 Identities=27% Similarity=0.404 Sum_probs=220.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
.|..++.||+|+||.|+.|.++.+|+.||||++..........++..||+++|+.++|+||+.+++.+.-
T Consensus 23 ~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p---------- 92 (359)
T KOG0660|consen 23 YYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRP---------- 92 (359)
T ss_pred eecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccc----------
Confidence 4455789999999999999999999999999998666666778899999999999999999999987632
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCc
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 541 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIi 541 (1196)
.....-..+|+|+|+|+.+|.+++++...+++..+..+++||++||.|+||.+|+
T Consensus 93 -------------------------~~~~~f~DvYiV~elMetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnVi 147 (359)
T KOG0660|consen 93 -------------------------PSRDKFNDVYLVFELMETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVI 147 (359)
T ss_pred -------------------------ccccccceeEEehhHHhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhccccc
Confidence 0112345689999999999999999998899999999999999999999999999
Q ss_pred ccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHH
Q 000993 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621 (1196)
Q Consensus 542 HrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSl 621 (1196)
||||||+|+|++.++.+||+|||+|+..... .....+|.++.|.+|.|||++.....|+.+.||||+
T Consensus 148 HRDLKPsNll~n~~c~lKI~DFGLAR~~~~~-------------~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSv 214 (359)
T KOG0660|consen 148 HRDLKPSNLLLNADCDLKICDFGLARYLDKF-------------FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSV 214 (359)
T ss_pred ccccchhheeeccCCCEEeccccceeecccc-------------CcccchhcceeeeeecCHHHHhccccccchhhhhhh
Confidence 9999999999999999999999999976422 011235778999999999999887889999999999
Q ss_pred HHHHHHhhc--C-CchhHHHHH-----------------------HHHHhhhcCCCCC-----ccccCCHHHHHHHHHcc
Q 000993 622 GIVFFELWH--P-FSTAMERQI-----------------------VLSDLKQKGELPP-----SWVAKFSEQESLLRRLM 670 (1196)
Q Consensus 622 GviLyELlt--P-f~~~~~~~~-----------------------~~~~l~~~~~~p~-----~~~~~~~~l~~LI~~cL 670 (1196)
||||.||++ | |.+.+.... ...-+...+..|+ .+++..+.+.+|+.+||
T Consensus 215 GCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL 294 (359)
T KOG0660|consen 215 GCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKML 294 (359)
T ss_pred hHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHh
Confidence 999999996 2 221111100 0111111222222 34456788999999999
Q ss_pred cCCCCCCCCHHHHHhccCCCCchHHHHHHHHHhcCCCCCCcchh
Q 000993 671 SPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIYD 714 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 714 (1196)
..||.+|+|++++|+||++. .++.++|.+.+.
T Consensus 295 ~fdP~kRita~eAL~hPYl~------------~~hdp~dEP~~~ 326 (359)
T KOG0660|consen 295 VFDPKKRITAEEALAHPYLA------------PYHDPEDEPVCQ 326 (359)
T ss_pred ccCccccCCHHHHhcChhhh------------hhcCCccCCCCC
Confidence 99999999999999999655 456666766544
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-41 Score=371.72 Aligned_cols=277 Identities=25% Similarity=0.399 Sum_probs=231.6
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
-+++|++++.||+|.-|+||+|+.+.++..+|+|++.+.... .....+...|-+||+.++||.++.+|+.|
T Consensus 75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~f-------- 146 (459)
T KOG0610|consen 75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASF-------- 146 (459)
T ss_pred CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhee--------
Confidence 357899999999999999999999999999999999765432 33456778899999999999999999887
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~y 534 (1196)
+...+.|++||||+ |+|..+.+++ ..|+++.++.|+.+++.||+|
T Consensus 147 --------------------------------et~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEY 194 (459)
T KOG0610|consen 147 --------------------------------ETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEY 194 (459)
T ss_pred --------------------------------eccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHH
Confidence 34678999999997 4898888765 469999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccc-cccccC-----------------CCCC-----CCC-------
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL-EQLDQD-----------------AAFP-----TDT------- 584 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~-~~~~~~-----------------~~~~-----~~~------- 584 (1196)
||-.|||+|||||+||||.++||+.|+||-++..... ++.... ..+. ...
T Consensus 195 LHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~ 274 (459)
T KOG0610|consen 195 LHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDE 274 (459)
T ss_pred HHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccc
Confidence 9999999999999999999999999999999976532 111100 0000 000
Q ss_pred -----------CCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhh---cCCchhHHHHHHHHHhhhcCC
Q 000993 585 -----------GGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGE 650 (1196)
Q Consensus 585 -----------~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELl---tPf~~~~~~~~~~~~l~~~~~ 650 (1196)
........+++||-.|+|||++.| ...+.++|||+|||+||||+ |||.+....+....++.+...
T Consensus 275 ~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G-~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~ 353 (459)
T KOG0610|consen 275 SASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG-EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLK 353 (459)
T ss_pred cccccchhhhcCCCCccccccccccccccceeeec-CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCc
Confidence 111133467899999999999999 45799999999999999999 599999999999888887777
Q ss_pred CCCccccCCHHHHHHHHHcccCCCCCCCC----HHHHHhccCCCCchHHHH
Q 000993 651 LPPSWVAKFSEQESLLRRLMSPSPSDRPS----ATELLQDALPPQMEYELL 697 (1196)
Q Consensus 651 ~p~~~~~~~~~l~~LI~~cL~~dP~~RPt----a~eiL~~~~~~~~~~~~~ 697 (1196)
+|... ..+..+++||+++|.+||.+|.. +.+|-+||||++++|.++
T Consensus 354 Fp~~~-~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLi 403 (459)
T KOG0610|consen 354 FPEEP-EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALI 403 (459)
T ss_pred CCCCC-cchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChhhe
Confidence 76554 56679999999999999999998 999999999999999955
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-41 Score=367.90 Aligned_cols=252 Identities=28% Similarity=0.464 Sum_probs=218.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..+|++.+.||+|.||+|.+|.....|+.||||.|+... .+....-.+.+|+++|+.|+||||+++|.+|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVF--------- 122 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVF--------- 122 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhh---------
Confidence 468999999999999999999998999999999997654 3444556789999999999999999999887
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
.+...+.|||||.. |.|++++.+++.+++.+++.|++||++|+.|||.
T Consensus 123 -------------------------------ENkdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHk 171 (668)
T KOG0611|consen 123 -------------------------------ENKDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHK 171 (668)
T ss_pred -------------------------------cCCceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhh
Confidence 23567899999995 6999999999999999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
++++|||||.+|||+|.++++||+|||++..+..... .+++||+|.|.+||++.|.++-++.+|
T Consensus 172 nrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kf----------------LqTFCGSPLYASPEIvNG~PY~GPEVD 235 (668)
T KOG0611|consen 172 NRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKF----------------LQTFCGSPLYASPEIVNGTPYKGPEVD 235 (668)
T ss_pred ccceecccchhheeecCCCCeeeeccchhhhhccccH----------------HHHhcCCcccCCccccCCCCCCCCccc
Confidence 9999999999999999999999999999987643321 356899999999999999887789999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
.|||||+||.|.+ ||.+.+....+.++-+....-|+. ++++.-||++||..||.+|.|+++|-.|=|...
T Consensus 236 sWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~~----PSdA~gLIRwmLmVNP~RRATieDiAsHWWvNw 308 (668)
T KOG0611|consen 236 SWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPET----PSDASGLIRWMLMVNPERRATIEDIASHWWVNW 308 (668)
T ss_pred hhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCCC----CchHHHHHHHHHhcCcccchhHHHHhhhheeec
Confidence 9999999999985 998887766655554433333332 347788999999999999999999999977653
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-41 Score=374.72 Aligned_cols=268 Identities=27% Similarity=0.475 Sum_probs=219.3
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC------------chhHHHHHHHHHHHHhcCCCCee
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS------------LPVNDRILREVATLSRLQHQHVV 443 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~------------~~~~~~~~~Ev~iL~~L~HpnIV 443 (1196)
....+++|++++.||+|.||+|.+|++..+++.||||++.+.... ....+++.+|+.+|+++.|||||
T Consensus 92 ~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV 171 (576)
T KOG0585|consen 92 DRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVV 171 (576)
T ss_pred cceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCee
Confidence 445689999999999999999999999999999999999764321 11235899999999999999999
Q ss_pred eeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCC-CCHHHHH
Q 000993 444 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH-FDKELAW 522 (1196)
Q Consensus 444 ~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~-l~e~~~~ 522 (1196)
+++.+.-+ .....+|||+|||...-..+...... +++.+++
T Consensus 172 ~LiEvLDD--------------------------------------P~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar 213 (576)
T KOG0585|consen 172 KLIEVLDD--------------------------------------PESDKLYLVLEYCSKGEVKWCPPDKPELSEQQAR 213 (576)
T ss_pred EEEEeecC--------------------------------------cccCceEEEEEeccCCccccCCCCcccccHHHHH
Confidence 99988622 23678999999997543344444455 9999999
Q ss_pred HHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCC
Q 000993 523 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 602 (1196)
Q Consensus 523 ~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 602 (1196)
+|+.+++.||+|||.+|||||||||+|+||+++|++||+|||.+....... ..+........+|||+|||
T Consensus 214 ~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~----------~~~~d~~L~~tvGTPAF~A 283 (576)
T KOG0585|consen 214 KYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGS----------DEGSDDQLSRTVGTPAFFA 283 (576)
T ss_pred HHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccceeeecccCC----------ccccHHHHhhcCCCccccc
Confidence 999999999999999999999999999999999999999999997653221 1111222334799999999
Q ss_pred chhccCC---CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCC
Q 000993 603 PEIEQGW---PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 676 (1196)
Q Consensus 603 PE~l~~~---~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~ 676 (1196)
||...+. ...+.+.||||+||+||-|+. ||.+....+...++......+|.. ....+.+++||++||++||.+
T Consensus 284 PE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~-pe~~e~~kDli~~lL~KdP~~ 362 (576)
T KOG0585|consen 284 PELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPEN-PEINEDLKDLIKRLLEKDPEQ 362 (576)
T ss_pred hHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCc-ccccHHHHHHHHHHhhcChhh
Confidence 9998762 235689999999999999984 999999888888877755555543 345678999999999999999
Q ss_pred CCCHHHHHhccCCCCc
Q 000993 677 RPSATELLQDALPPQM 692 (1196)
Q Consensus 677 RPta~eiL~~~~~~~~ 692 (1196)
|.+..+|..|||..+.
T Consensus 363 Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 363 RITLPDIKLHPWVTRD 378 (576)
T ss_pred eeehhhheecceeccC
Confidence 9999999999997654
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=384.38 Aligned_cols=253 Identities=24% Similarity=0.432 Sum_probs=213.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
..|....+||+|+.|.||.|+...+++.||||.+.+.... ..+-+++|+.+|+..+|+|||.++..|+.
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~--~keLilnEi~Vm~~~~H~NiVnfl~Sylv--------- 341 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP--KKELLLNEILVMRDLHHPNIVNFLDSYLV--------- 341 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCC--chhhhHHHHHHHHhccchHHHHHHHHhcc---------
Confidence 4566678999999999999999999999999999876554 34568899999999999999999988743
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+|+||||++ |+|.+++.. ..++|.++..++.+++.||+|||.+|
T Consensus 342 -------------------------------~deLWVVMEym~ggsLTDvVt~-~~~~E~qIA~Icre~l~aL~fLH~~g 389 (550)
T KOG0578|consen 342 -------------------------------GDELWVVMEYMEGGSLTDVVTK-TRMTEGQIAAICREILQGLKFLHARG 389 (550)
T ss_pred -------------------------------cceeEEEEeecCCCchhhhhhc-ccccHHHHHHHHHHHHHHHHHHHhcc
Confidence 356899999996 587777754 44999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+|||||.+|||++.+|.+||+|||+|..+.... ....+.+|||.|||||++.. ..|++++|||
T Consensus 390 IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~---------------~KR~TmVGTPYWMAPEVvtr-k~YG~KVDIW 453 (550)
T KOG0578|consen 390 IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ---------------SKRSTMVGTPYWMAPEVVTR-KPYGPKVDIW 453 (550)
T ss_pred eeeeccccceeEeccCCcEEEeeeeeeecccccc---------------CccccccCCCCccchhhhhh-cccCccccch
Confidence 9999999999999999999999999998775432 13467799999999999998 5799999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||||+++||+- ||....+-.....+..........+...++.+++|+.+||+.||.+|+++.++|+|||++.-
T Consensus 454 SLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a 529 (550)
T KOG0578|consen 454 SLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMA 529 (550)
T ss_pred hhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhc
Confidence 99999999994 77765554444333332222334566788999999999999999999999999999998543
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=370.99 Aligned_cols=254 Identities=26% Similarity=0.442 Sum_probs=213.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++.+.||+|+||.||+|.++.+|+.||+|++..... .......+.+|+.+++.++||||+++++++.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------- 71 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEH--------- 71 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhc---------
Confidence 478999999999999999999999999999999975432 2234557889999999999999999987652
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
+..++|+||||++ ++|.+++.....+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 120 (291)
T cd05612 72 -------------------------------DQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSK 120 (291)
T ss_pred -------------------------------cCCeEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999996 59999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++..... ....+||+.|+|||++.+ ..++.++||
T Consensus 121 ~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~------------------~~~~~gt~~y~aPE~~~~-~~~~~~~Di 181 (291)
T cd05612 121 EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR------------------TWTLCGTPEYLAPEVIQS-KGHNKAVDW 181 (291)
T ss_pred CeeecCCCHHHeEECCCCCEEEEecCcchhccCC------------------cccccCChhhcCHHHHcC-CCCCchhhH
Confidence 9999999999999999999999999999754211 123479999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhccCCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPP 690 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~~~~~ 690 (1196)
|||||++|+|++ ||..................+|. ..++.+++||++||+.||.+||+ ++++++|+|+.
T Consensus 182 wSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~ 258 (291)
T cd05612 182 WALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPR---HLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFK 258 (291)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCc---cCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCcccc
Confidence 999999999997 88776665555554443333333 33678999999999999999995 99999999999
Q ss_pred CchHHH
Q 000993 691 QMEYEL 696 (1196)
Q Consensus 691 ~~~~~~ 696 (1196)
...+..
T Consensus 259 ~~~~~~ 264 (291)
T cd05612 259 SVDWDD 264 (291)
T ss_pred CCCHHH
Confidence 877653
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=377.87 Aligned_cols=258 Identities=24% Similarity=0.394 Sum_probs=215.6
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
..+++|++.+.||+|+||.||+|+++.+|+.||||++..... .....+.+.+|+.+++.++||||++++++|.+
T Consensus 15 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----- 89 (329)
T PTZ00263 15 WKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQD----- 89 (329)
T ss_pred CCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc-----
Confidence 346899999999999999999999999999999999975432 22334678899999999999999999988732
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|++||||. ++|.+++.....+++..++.++.||+.||+||
T Consensus 90 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~L 134 (329)
T PTZ00263 90 -----------------------------------ENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYL 134 (329)
T ss_pred -----------------------------------CCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 457899999996 59999999888899999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+|||++.++.+||+|||+++..... ....+||+.|+|||++.+ ..++.+
T Consensus 135 H~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~------------------~~~~~gt~~y~aPE~~~~-~~~~~~ 195 (329)
T PTZ00263 135 HSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR------------------TFTLCGTPEYLAPEVIQS-KGHGKA 195 (329)
T ss_pred HHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC------------------cceecCChhhcCHHHHcC-CCCCCc
Confidence 9999999999999999999999999999999754211 123579999999999988 568999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhcc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDA 687 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~~ 687 (1196)
+|||||||++|||++ ||...........+......+|. ..++.+++||++||+.||.+||+ +++++.|+
T Consensus 196 ~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp 272 (329)
T PTZ00263 196 VDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPN---WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHP 272 (329)
T ss_pred ceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCC---CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCC
Confidence 999999999999997 88766555444444333222332 24568999999999999999996 79999999
Q ss_pred CCCCchHHHH
Q 000993 688 LPPQMEYELL 697 (1196)
Q Consensus 688 ~~~~~~~~~~ 697 (1196)
||....+..+
T Consensus 273 ~f~~~~~~~~ 282 (329)
T PTZ00263 273 YFHGANWDKL 282 (329)
T ss_pred ccCCCCHHHH
Confidence 9998766543
|
|
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-39 Score=365.66 Aligned_cols=254 Identities=24% Similarity=0.392 Sum_probs=204.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|++.++||.|+||.||+|+++.+++.||+|+++..... .....+.+|+.+++.++||||+++++++.
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~--------- 73 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKNLKHANIVTLHDIIH--------- 73 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC-CcchhHHHHHHHHHhCCCCCEeeEEEEEc---------
Confidence 57899999999999999999999999999999998754322 23356789999999999999999998862
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....+|+||||++++|.+++.... .+++..+..++.||+.||+|||++
T Consensus 74 -------------------------------~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 122 (288)
T cd07871 74 -------------------------------TERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKR 122 (288)
T ss_pred -------------------------------CCCeEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 234689999999999999887544 578999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+...++.++||
T Consensus 123 ~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 187 (288)
T cd07871 123 KILHRDLKPQNLLINEKGELKLADFGLARAKSVPT---------------KTYSNEVVTLWYRPPDVLLGSTEYSTPIDM 187 (288)
T ss_pred CcccCCCCHHHEEECCCCCEEECcCcceeeccCCC---------------ccccCceecccccChHHhcCCcccCcHHHH
Confidence 99999999999999999999999999997532111 012335789999999998765668999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-------------------CCC--------ccccCCHHHHHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-------------------LPP--------SWVAKFSEQESLLRR 668 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-------------------~p~--------~~~~~~~~l~~LI~~ 668 (1196)
|||||++|||++ ||......+.........+. .|. .....++++.+||++
T Consensus 188 wslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ 267 (288)
T cd07871 188 WGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSS 267 (288)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHH
Confidence 999999999997 77654443332222111110 000 012345678999999
Q ss_pred cccCCCCCCCCHHHHHhccCC
Q 000993 669 LMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~ 689 (1196)
||+.||.+|||++++++||||
T Consensus 268 mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 268 LLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred hcCcCcccCCCHHHHhcCCCC
Confidence 999999999999999999997
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=368.38 Aligned_cols=258 Identities=26% Similarity=0.401 Sum_probs=205.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||+|+||.||+|+++.+++.||||+++..... .....+.+|+.+++.++||||+++++++.
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~---------- 73 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE-GTPFTAIREASLLKGLKHANIVLLHDIIH---------- 73 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc-ccchhHHHHHHHHhhCCCCCcCeEEEEEe----------
Confidence 6899999999999999999999999999999998754322 22346778999999999999999998873
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
....+|+|||||+++|.+++... ..+++..++.++.||+.||+|||++|
T Consensus 74 ------------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 123 (303)
T cd07869 74 ------------------------------TKETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRY 123 (303)
T ss_pred ------------------------------cCCeEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 23578999999999998888654 56899999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+...++.++|||
T Consensus 124 ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diw 188 (303)
T cd07869 124 ILHRDLKPQNLLISDTGELKLADFGLARAKSVPS---------------HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMW 188 (303)
T ss_pred eecCCCCHHHEEECCCCCEEECCCCcceeccCCC---------------ccCCCCcccCCCCChHHHcCCCCCCcHHHHH
Confidence 9999999999999999999999999987432111 1123457899999999987756689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC------------------------CCCcc------ccCCHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGE------------------------LPPSW------VAKFSEQESLL 666 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~------------------------~p~~~------~~~~~~l~~LI 666 (1196)
||||++|||++ ||....+.......+..... .+..+ ...++.+.+||
T Consensus 189 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli 268 (303)
T cd07869 189 GVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLA 268 (303)
T ss_pred HHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHH
Confidence 99999999997 77654332221111110000 00000 01235788999
Q ss_pred HHcccCCCCCCCCHHHHHhccCCCCchH
Q 000993 667 RRLMSPSPSDRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 667 ~~cL~~dP~~RPta~eiL~~~~~~~~~~ 694 (1196)
.+||+.||.+|||+.++++|+||.+...
T Consensus 269 ~~mL~~dp~~R~s~~~~l~h~~f~~~~~ 296 (303)
T cd07869 269 SKLLQCFPKNRLSAQAALSHEYFSDLPP 296 (303)
T ss_pred HHHhccCchhccCHHHHhcCcccccCCh
Confidence 9999999999999999999999988754
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-39 Score=372.74 Aligned_cols=265 Identities=28% Similarity=0.408 Sum_probs=208.1
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||+|+||.||+|+++.+|+.||||++...........++.+|+.+++.++||||+++++++....
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-------- 72 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPS-------- 72 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccC--------
Confidence 488999999999999999999999999999998754333344567889999999999999999998874321
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCc
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 541 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIi 541 (1196)
......+|+|||||+++|.+++.....+++..++.++.||+.||+|||++||+
T Consensus 73 ---------------------------~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv 125 (338)
T cd07859 73 ---------------------------RREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVF 125 (338)
T ss_pred ---------------------------CCCCceEEEEEecCCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 01234689999999999999998888899999999999999999999999999
Q ss_pred ccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC-CCCCCcchhHH
Q 000993 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYS 620 (1196)
Q Consensus 542 HrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~s~ksDVwS 620 (1196)
||||||+|||++.++.+||+|||+++........ .......+||+.|+|||++.+. ..++.++||||
T Consensus 126 H~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwS 193 (338)
T cd07859 126 HRDLKPKNILANADCKLKICDFGLARVAFNDTPT------------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWS 193 (338)
T ss_pred cCCCCHHHeEECCCCcEEEccCccccccccccCc------------cccccCCCCCCCcCCHHHHhccccccCchhHHHH
Confidence 9999999999999999999999999754221100 0112345799999999998652 45899999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHH--------------------------HHhhhcCCC--CCccccCCHHHHHHHHHc
Q 000993 621 LGIVFFELWH---PFSTAMERQIVL--------------------------SDLKQKGEL--PPSWVAKFSEQESLLRRL 669 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~--------------------------~~l~~~~~~--p~~~~~~~~~l~~LI~~c 669 (1196)
|||++|||++ ||.......... ..+...... ...+...++.+.++|.+|
T Consensus 194 lGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 273 (338)
T cd07859 194 IGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERL 273 (338)
T ss_pred HHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHH
Confidence 9999999997 665432211100 000000111 112234567889999999
Q ss_pred ccCCCCCCCCHHHHHhccCCCCch
Q 000993 670 MSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 670 L~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
|+.||++|||++++++|+||.+..
T Consensus 274 l~~~P~~Rpt~~e~l~hp~f~~~~ 297 (338)
T cd07859 274 LAFDPKDRPTAEEALADPYFKGLA 297 (338)
T ss_pred cCcCcccCCCHHHHhcCchhhhcC
Confidence 999999999999999999998754
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=349.03 Aligned_cols=259 Identities=25% Similarity=0.448 Sum_probs=221.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC--C----chhHHHHHHHHHHHHhc-CCCCeeeeeeeeee
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK--S----LPVNDRILREVATLSRL-QHQHVVRYYQAWFE 451 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~--~----~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e 451 (1196)
+.+.|+-.+.||+|..+.|.+|.++.+|+.+|+|+|..... + .+..+.-.+|+.+|+++ .||||+++.+.|
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y-- 92 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY-- 92 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec--
Confidence 45678888999999999999999999999999999976431 1 12334566899999998 799999999876
Q ss_pred cCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHH
Q 000993 452 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVE 530 (1196)
Q Consensus 452 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~ 530 (1196)
+.+.++|+|+|.|+ |.|.|+|.+.-.+++..+++++.|+..
T Consensus 93 --------------------------------------es~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfe 134 (411)
T KOG0599|consen 93 --------------------------------------ESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFE 134 (411)
T ss_pred --------------------------------------cCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHH
Confidence 23567899999997 799999999999999999999999999
Q ss_pred HHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--
Q 000993 531 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG-- 608 (1196)
Q Consensus 531 gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-- 608 (1196)
|++|||.++|+||||||+|||++++.++||+|||+|+.+.... .....||||+|+|||.+..
T Consensus 135 gVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~Ge----------------kLrelCGTPgYLAPEtikC~m 198 (411)
T KOG0599|consen 135 GVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGE----------------KLRELCGTPGYLAPETIKCSM 198 (411)
T ss_pred HHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCch----------------hHHHhcCCCcccChhheeeec
Confidence 9999999999999999999999999999999999999875432 1245699999999998753
Q ss_pred ---CCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC-CCccccCCHHHHHHHHHcccCCCCCCCCHH
Q 000993 609 ---WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSDRPSAT 681 (1196)
Q Consensus 609 ---~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ 681 (1196)
.+.|+..+|+||+|||||.|+. ||......-....++..+..+ .|.|...+.+.++||.+||+.||.+|.|++
T Consensus 199 ~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritak 278 (411)
T KOG0599|consen 199 YENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAK 278 (411)
T ss_pred ccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHH
Confidence 4569999999999999999995 887666555555555555443 578999999999999999999999999999
Q ss_pred HHHhccCCCCch
Q 000993 682 ELLQDALPPQME 693 (1196)
Q Consensus 682 eiL~~~~~~~~~ 693 (1196)
++|+||||.++.
T Consensus 279 e~LaHpff~q~~ 290 (411)
T KOG0599|consen 279 EALAHPFFIQIA 290 (411)
T ss_pred HHhcChHHHHHH
Confidence 999999998764
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-39 Score=363.16 Aligned_cols=254 Identities=26% Similarity=0.422 Sum_probs=202.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||+|+||.||+|+++.+++.||||++............+.+|+.+++.++||||++++++|.
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~---------- 70 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFR---------- 70 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEe----------
Confidence 4799999999999999999999999999999999765544445567889999999999999999998762
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE-SYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~-~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
....+|+||||+++++.+.+. ....+++..++.++.||+.||+|||++|
T Consensus 71 ------------------------------~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 120 (287)
T cd07848 71 ------------------------------RRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKND 120 (287)
T ss_pred ------------------------------cCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 235689999999876555554 4457999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+||+++.++.+||+|||+++...... ........||+.|+|||++.+ ..++.++|||
T Consensus 121 i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Diw 185 (287)
T cd07848 121 IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS--------------NANYTEYVATRWYRSPELLLG-APYGKAVDMW 185 (287)
T ss_pred eecCCCCHHHEEEcCCCcEEEeeccCcccccccc--------------cccccccccccccCCcHHHcC-CCCCCchhHH
Confidence 9999999999999999999999999998653211 011223578999999999987 5689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-------------------C----------ccccCCHHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-------------------P----------SWVAKFSEQESLLR 667 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-------------------~----------~~~~~~~~l~~LI~ 667 (1196)
||||++|||++ ||................+..| . .....++.+.+||+
T Consensus 186 slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~ 265 (287)
T cd07848 186 SVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMK 265 (287)
T ss_pred hHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHH
Confidence 99999999996 7765443322221111111110 0 01124567899999
Q ss_pred HcccCCCCCCCCHHHHHhccCC
Q 000993 668 RLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
+||+.||.+|||++++++||||
T Consensus 266 ~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 266 NLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred HHccCCcccCCCHHHHhcCCCC
Confidence 9999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >PRK00413 thrS threonyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-40 Score=410.71 Aligned_cols=360 Identities=14% Similarity=0.138 Sum_probs=271.0
Q ss_pred cccccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC--CcccccceEEEeecCCceEeecC
Q 000993 734 TLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD--CPQFKRNTVKLLTHGGDLLELSH 807 (1196)
Q Consensus 734 ~l~~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~--~~~~~~~my~f~D~~G~~laLRP 807 (1196)
.+.+++.+.|++||+|.++.+++.|++.++++|.+|||++|.||+| ++... .+...++||.|.|.+|+.++|||
T Consensus 252 ~~~~~~~~~G~~~~lp~~~~~~~~i~~~~~~~~~~~Gy~ei~tP~le~~~l~~~~g~~~~~~~~my~~~d~~~~~~~LRP 331 (638)
T PRK00413 252 LFHFQEEAPGLPFWHPKGWTIRRELERYIRRKLRKAGYQEVKTPQILDRELWETSGHWDHYRENMFPTTESDGEEYALKP 331 (638)
T ss_pred EEEecCCCCcceEEcccHHHHHHHHHHHHHHHHHHCCCEEEECCeeCCHHHHHhcCChhhhhhccceeecCCCcEEEEec
Confidence 3455677799999999999999999999999999999999999999 33322 35668999999999999999999
Q ss_pred CCcHHHHHHHHhCC----CCceeEEEecCeeecCCCC---C--CCcceeEeEEEEeCCCCccc-h-HHHHHHHHHHHHHc
Q 000993 808 ELRLPFIRWAISNQ----KSSFKRYEISSVYRRAIGH---S--PPNRYLQGDFDIIGGASALT-E-AEVLKVTMDIVTRF 876 (1196)
Q Consensus 808 D~T~~iaR~~a~~~----~~P~r~~Y~G~VfR~e~~~---~--~~~ef~Q~GvEiiG~~~~~a-D-aEvI~la~~~L~~l 876 (1196)
+.|++++|+++++. ..|+|+||+|+|||+|+++ + |.|||+|+|+|+||.+++.+ | +|+|.++.++|+.|
T Consensus 332 ~~~~~~~r~~~~~~~s~~~lP~r~~~~g~~fR~E~~~~~~Gl~R~reF~q~~~~~~g~~~~~~~e~~eii~l~~~~~~~l 411 (638)
T PRK00413 332 MNCPGHVQIYKQGLRSYRDLPLRLAEFGTVHRYEPSGALHGLMRVRGFTQDDAHIFCTPEQIEEEVKKVIDLILDVYKDF 411 (638)
T ss_pred CCcHHHHHHHhCcCCChhhCCceeeeccCeecCCCCCCCcCcceeeeeEEeeEEEEcCHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999998753 3599999999999999986 2 55679999999999988764 6 99999999999999
Q ss_pred CCCCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 000993 877 FHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGL 956 (1196)
Q Consensus 877 gi~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~ 956 (1196)
|+++ +.++||++ .. ..+|.++.+......+ ++.+...+++.+..+...++
T Consensus 412 g~~~-~~i~l~~r--~~---~~~g~~~~~~~~~~~l----------------------~~~l~~~g~~~~~~~~~~~~-- 461 (638)
T PRK00413 412 GFED-YEVKLSTR--PE---KRIGSDEMWDKAEAAL----------------------KEALDELGLDYEIAPGEGAF-- 461 (638)
T ss_pred CCce-EEEEEecC--Cc---ccCCCHHHHHHHHHHH----------------------HHHHHHcCCCceecCCcccc--
Confidence 9985 99999997 22 2456654322111111 11122222222211111111
Q ss_pred HhcCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCC-CccceEEEEEecCCCCccccccccccc
Q 000993 957 RFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIES-YHRNLFFQVFSVKEKYPATLVEGTLLA 1035 (1196)
Q Consensus 957 ~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~-YYTG~vFe~~~~~~~~~~~~~~~~~I~ 1035 (1196)
.|+. +.. .+..++.++ ..+ ..+.+|+++.++++ ||||.+++.
T Consensus 462 --~~~~------~~~------~~~~~~~~~----~~l-~~~~~d~~~~~~~dl~Yt~~~~~~------------------ 504 (638)
T PRK00413 462 --YGPK------IDF------QLKDALGRE----WQC-GTIQLDFNLPERFDLTYVGEDGEK------------------ 504 (638)
T ss_pred --ccce------EEE------EeecCCCCe----EEe-ccEeecccChhhcCCEEECCCCCc------------------
Confidence 1210 000 000111111 001 24677888888888 677764211
Q ss_pred cccccchhhhhccccccccccCCCCCCCcc---eecccHHHHHhhccC---CCCCCCCCCCceEEEEEcCCCchHHHHHH
Q 000993 1036 VGGRYDYLLHRMWDREYVGYASRTNPPSGV---GASLALETIIQHYPV---DFKPVRNEAGTSVLVCSRGGGGLLVERME 1109 (1196)
Q Consensus 1036 ~GGRYD~L~~~fg~~~~~~~~g~~~~~pAv---Gfaiglerl~~~L~~---~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ 1109 (1196)
..|++ |++-++||++.+|.+ +..+. ..++.+|+|++.+ +....+|.+
T Consensus 505 -------------------------~~p~~i~~~~~g~~eRli~~l~e~~~~~~p~-~~~p~~v~Ii~~~-~~~~~~a~~ 557 (638)
T PRK00413 505 -------------------------HRPVMIHRAILGSMERFIGILIEHYAGAFPT-WLAPVQVVVLPIT-DKHADYAKE 557 (638)
T ss_pred -------------------------cCcEEEEecceehHHHHHHHHHHHcCCCCCc-ccCcceEEEEEeC-hhHHHHHHH
Confidence 13666 667789999998853 32222 2357789999986 667789999
Q ss_pred HHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHhh
Q 000993 1110 LVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1188 (1196)
Q Consensus 1110 ~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~~ 1188 (1196)
++++||++|++|+++.. ++++++++++|++.|+|++|++|++|+++|+|+||||++++|..++++++++.|++.+++.
T Consensus 558 i~~~Lr~~gi~v~~d~~-~~~l~kki~~A~~~g~~~~iiiG~~E~~~~~v~vr~~~~~~q~~i~~~~l~~~i~~~~~~~ 635 (638)
T PRK00413 558 VAKKLKAAGIRVEVDLR-NEKIGYKIREAQLQKVPYMLVVGDKEVEAGTVSVRRRGGKDLGTMSLDEFIERLLEEIASR 635 (638)
T ss_pred HHHHHHhCCCEEEEECC-CCCHhHHHHHhhccCCCEEEEEcchhhhcCeEEEEECCCCccceeeHHHHHHHHHHHHhhc
Confidence 99999999999998877 6799999999999999999999999999999999999999999999999999999887754
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-39 Score=372.56 Aligned_cols=252 Identities=25% Similarity=0.369 Sum_probs=208.7
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 465 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 465 (1196)
+.||+|+||.||+|+++.+|+.||||+++.... .......+.+|+.+++.++||||++++++|.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~--------------- 65 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQ--------------- 65 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEE---------------
Confidence 369999999999999999999999999975332 2233456789999999999999999998773
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccC
Q 000993 466 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544 (1196)
Q Consensus 466 g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrD 544 (1196)
...++|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++||+|||
T Consensus 66 -------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrD 120 (323)
T cd05571 66 -------------------------THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRD 120 (323)
T ss_pred -------------------------cCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCC
Confidence 2457899999997 58999998888899999999999999999999999999999
Q ss_pred CCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHH
Q 000993 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 624 (1196)
Q Consensus 545 LKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGvi 624 (1196)
|||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||+
T Consensus 121 lkp~NIll~~~~~~kl~DfG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~i 184 (323)
T cd05571 121 LKLENLMLDKDGHIKITDFGLCKEGISDG---------------ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVV 184 (323)
T ss_pred CCHHHEEECCCCCEEEeeCCCCcccccCC---------------CcccceecCccccChhhhcC-CCCCccccCcccchh
Confidence 99999999999999999999987421110 11234579999999999987 568999999999999
Q ss_pred HHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccCCCCchHHH
Q 000993 625 FFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQMEYEL 696 (1196)
Q Consensus 625 LyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~~~~~~~~~ 696 (1196)
+|||++ ||..................+| ...++++.+||++||+.||.+|| ++.++++|+||....+..
T Consensus 185 l~elltg~~Pf~~~~~~~~~~~~~~~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~~~ 261 (323)
T cd05571 185 MYEMMCGRLPFYNQDHEKLFELILMEEIRFP---RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQD 261 (323)
T ss_pred hhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCHHH
Confidence 999997 8876555444444433333333 34567999999999999999999 899999999999987653
Q ss_pred H
Q 000993 697 L 697 (1196)
Q Consensus 697 ~ 697 (1196)
.
T Consensus 262 ~ 262 (323)
T cd05571 262 V 262 (323)
T ss_pred H
Confidence 3
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=375.05 Aligned_cols=253 Identities=33% Similarity=0.554 Sum_probs=222.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|+.++++|+|+||.+++++++.+++.||+|+|+....+....+...+|+.++++++|||||.|++.|++.
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~------- 75 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEED------- 75 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcC-------
Confidence 5789999999999999999999999999999999999888777777899999999999999999999998653
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
..+++|+|+||+ |+|.+.+.+.. .|+++.++.|+.||+.|+.|||
T Consensus 76 --------------------------------~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH 123 (426)
T KOG0589|consen 76 --------------------------------GQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLH 123 (426)
T ss_pred --------------------------------CceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH
Confidence 445899999996 58999887544 5999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
+++|+|||||+.|||++.++.|||+|||+|+.+.... -...+.+|||.||.||++.+ -.|+.|+
T Consensus 124 ~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~---------------~~a~tvvGTp~YmcPEil~d-~pYn~KS 187 (426)
T KOG0589|consen 124 ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED---------------SLASTVVGTPYYMCPEILSD-IPYNEKS 187 (426)
T ss_pred hhhhhcccchhhhhhccccCceeecchhhhhhcCCch---------------hhhheecCCCcccCHHHhCC-CCCCccC
Confidence 9999999999999999999999999999999875432 01346799999999999999 5799999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|||||||++|||++ +|...+......++.... ..|.....+.+++.+|+.||..+|..||++.++|.+|..
T Consensus 188 DiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~--~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l 261 (426)
T KOG0589|consen 188 DIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL--YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHL 261 (426)
T ss_pred cchhhcchHHHHHhcccccCccchHHHHHHHhhcc--CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhh
Confidence 99999999999996 788777777777776644 445555667799999999999999999999999998643
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-39 Score=372.58 Aligned_cols=258 Identities=24% Similarity=0.372 Sum_probs=214.9
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCC-cEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDG-RHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g-~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
....++|++.+.||+|+||.||+|.++.++ ..||+|++..... .......+.+|+.+++.++||||++++++|.+
T Consensus 26 ~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~--- 102 (340)
T PTZ00426 26 KMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKD--- 102 (340)
T ss_pred CCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEe---
Confidence 345689999999999999999999987555 6899999865332 22345678899999999999999999998732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
...+|+|||||+ |+|.+++.....+++..++.++.||+.||+
T Consensus 103 -------------------------------------~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~ 145 (340)
T PTZ00426 103 -------------------------------------ESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFE 145 (340)
T ss_pred -------------------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 457899999996 599999998889999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+|||++.++++||+|||+++.... .....+||+.|||||++.+ ..++
T Consensus 146 ~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~------------------~~~~~~gt~~y~aPE~~~~-~~~~ 206 (340)
T PTZ00426 146 YLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT------------------RTYTLCGTPEYIAPEILLN-VGHG 206 (340)
T ss_pred HHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC------------------CcceecCChhhcCHHHHhC-CCCC
Confidence 99999999999999999999999999999999975421 1123579999999999987 5689
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHh
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQ 685 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~ 685 (1196)
.++|||||||++|||++ ||..................+|+ ..++.+.++|++||+.||.+|+ +++++++
T Consensus 207 ~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 207 KAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPK---FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred ccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCC---CCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 99999999999999997 88766555444444443333443 3456899999999999999995 8999999
Q ss_pred ccCCCCchHHH
Q 000993 686 DALPPQMEYEL 696 (1196)
Q Consensus 686 ~~~~~~~~~~~ 696 (1196)
||||.+..+..
T Consensus 284 hp~f~~~~~~~ 294 (340)
T PTZ00426 284 HPWFGNIDWVS 294 (340)
T ss_pred CCCcCCCCHHH
Confidence 99999887653
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=356.74 Aligned_cols=266 Identities=29% Similarity=0.496 Sum_probs=213.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCC-eeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH-VVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~Hpn-IV~l~~~~~e~~~~~~~ 458 (1196)
+..|..+++||+|+||+||+|+.+.+|+.||+|+++........-....+|+.+|+.++|+| ||++++++.....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~---- 85 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNN---- 85 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccc----
Confidence 56788889999999999999999999999999999876553334456789999999999999 9999988743210
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC----CCCHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD----HFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~----~l~e~~~~~i~~qIa~gL~y 534 (1196)
......+++|+||+..+|..++.... .++...++.++.||+.||+|
T Consensus 86 ------------------------------~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~ 135 (323)
T KOG0594|consen 86 ------------------------------HRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAF 135 (323)
T ss_pred ------------------------------ccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHH
Confidence 12245789999999999999998655 58888999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||+++|+||||||+||||+.+|.+||+|||+|+....+. ...+..++|.+|.|||++.|...|+.
T Consensus 136 ~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~---------------~~yt~evvTlWYRaPEvLlGs~~Ys~ 200 (323)
T KOG0594|consen 136 LHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPM---------------RTYTPEVVTLWYRAPEVLLGSTSYST 200 (323)
T ss_pred HHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCc---------------ccccccEEEeeccCHHHhcCCCcCCC
Confidence 999999999999999999999999999999999654221 12356689999999999999778999
Q ss_pred cchhHHHHHHHHHhhc--C-CchhHHHHHHHHHhhhcCCC-CCcc--------------------------ccCCHHHHH
Q 000993 615 KADMYSLGIVFFELWH--P-FSTAMERQIVLSDLKQKGEL-PPSW--------------------------VAKFSEQES 664 (1196)
Q Consensus 615 ksDVwSlGviLyELlt--P-f~~~~~~~~~~~~l~~~~~~-p~~~--------------------------~~~~~~l~~ 664 (1196)
..||||+|||+.||++ | |.+.++......+.+.-+.. ...| ....++..+
T Consensus 201 ~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~d 280 (323)
T KOG0594|consen 201 SVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIE 280 (323)
T ss_pred CcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHH
Confidence 9999999999999997 4 44444433333322211110 0011 111236789
Q ss_pred HHHHcccCCCCCCCCHHHHHhccCCCCchH
Q 000993 665 LLRRLMSPSPSDRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 665 LI~~cL~~dP~~RPta~eiL~~~~~~~~~~ 694 (1196)
++.+||+.+|.+|.|++.+|.|++|.....
T Consensus 281 ll~~~L~y~p~~R~Sa~~al~h~yf~~~~~ 310 (323)
T KOG0594|consen 281 LLSKLLQYDPAKRISAKGALTHPYFSELPE 310 (323)
T ss_pred HHHHHhccCcccCcCHHHHhcChhhccccc
Confidence 999999999999999999999999987643
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=372.28 Aligned_cols=253 Identities=28% Similarity=0.456 Sum_probs=214.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
..|..++.||+|+||.||+|.+..+++.||+|++++.... ...+++.+|+.+|.+++||||.++|++|+.
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~-deIediqqei~~Ls~~~~~~it~yygsyl~--------- 82 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAE-DEIEDIQQEISVLSQCDSPNITEYYGSYLK--------- 82 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcc-hhhHHHHHHHHHHHhcCcchHHhhhhheee---------
Confidence 3566678999999999999999999999999999876543 456789999999999999999999999854
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...++|+||||+ |++.+++.....+++..+..++++++.||.|||+++
T Consensus 83 -------------------------------g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~ 131 (467)
T KOG0201|consen 83 -------------------------------GTKLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEK 131 (467)
T ss_pred -------------------------------cccHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcc
Confidence 456799999996 599999998888899999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
.+|||||+.|||+..+|.+||+|||.+..+.... ....+++|||.|||||++++ ..|+.|+|||
T Consensus 132 kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~---------------~rr~tfvGTPfwMAPEVI~~-~~Y~~KADIW 195 (467)
T KOG0201|consen 132 KIHRDIKAANILLSESGDVKLADFGVAGQLTNTV---------------KRRKTFVGTPFWMAPEVIKQ-SGYDTKADIW 195 (467)
T ss_pred eecccccccceeEeccCcEEEEecceeeeeechh---------------hccccccccccccchhhhcc-ccccchhhhh
Confidence 9999999999999999999999999998654221 12367899999999999996 6799999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccc-cCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWV-AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~-~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||||+.+||++ |+...+++....-+ ....||... ..++.+++||..||+.||+.||+|.++|+|.|.+...
T Consensus 196 SLGITaiEla~GePP~s~~hPmrvlflI---pk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 196 SLGITAIELAKGEPPHSKLHPMRVLFLI---PKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAK 270 (467)
T ss_pred hhhHHHHHHhcCCCCCcccCcceEEEec---cCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcC
Confidence 99999999997 77776664332211 222333332 4566799999999999999999999999999887743
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=367.97 Aligned_cols=258 Identities=28% Similarity=0.446 Sum_probs=213.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++.+.||+|+||.||+|++..+++.||||+++.... .......+.+|+.+++.++||||+++++++.
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~--------- 71 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQ--------- 71 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEE---------
Confidence 479999999999999999999999999999999975422 2233457889999999999999999998873
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...++|+|||||+ ++|.+++.....+++.+++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~ 120 (333)
T cd05600 72 -------------------------------DDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHEL 120 (333)
T ss_pred -------------------------------cCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999996 59999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++.... .....+||+.|+|||++.+ ..++.++||
T Consensus 121 ~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv 181 (333)
T cd05600 121 GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT------------------YANSVVGSPDYMAPEVLRG-KGYDFTVDY 181 (333)
T ss_pred CccccCCCHHHEEECCCCCEEEEeCcCCccccc------------------ccCCcccCccccChhHhcC-CCCCCccce
Confidence 999999999999999999999999999975421 1234579999999999988 478999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhc--CCCCCc---cccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPS---WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~---~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
|||||++|||++ ||......+......... ...|.. ....++++.+||.+||..+|.+||++.++++|+||.
T Consensus 182 wslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~ 261 (333)
T cd05600 182 WSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFK 261 (333)
T ss_pred ecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccC
Confidence 999999999996 887655544333222211 111211 124567899999999999999999999999999999
Q ss_pred CchHHHH
Q 000993 691 QMEYELL 697 (1196)
Q Consensus 691 ~~~~~~~ 697 (1196)
...+..+
T Consensus 262 ~~~~~~~ 268 (333)
T cd05600 262 EVDWNEL 268 (333)
T ss_pred CCCHHHH
Confidence 8876544
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=371.69 Aligned_cols=275 Identities=26% Similarity=0.432 Sum_probs=214.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++++.||+|+||+||+|+++.+++.||||+++.... .......+.+|+.+++.++||||++++++|.
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~--------- 71 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQ--------- 71 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEe---------
Confidence 479999999999999999999999999999999975322 2233456888999999999999999998873
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
+...+|+|||||+ |+|.+++.+.+.+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~ 120 (363)
T cd05628 72 -------------------------------DKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQL 120 (363)
T ss_pred -------------------------------cCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2457899999997 59999999888999999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccC-----CCCCCC------CC---------CccccCcCccccc
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQD-----AAFPTD------TG---------GVSVDGTGQVGTY 598 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~-----~~~~~~------~~---------~~~~~~~~~~GT~ 598 (1196)
||+||||||+|||++.++++||+|||+++.+........ ...+.+ .. .........+||+
T Consensus 121 givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~ 200 (363)
T cd05628 121 GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTP 200 (363)
T ss_pred CeEecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCc
Confidence 999999999999999999999999999986532110000 000000 00 0000123468999
Q ss_pred cCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHcccCC
Q 000993 599 FYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPS 673 (1196)
Q Consensus 599 ~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~~~l~~LI~~cL~~d 673 (1196)
.|+|||++.+ ..++.++|||||||++|||++ ||......+....+.... ..+|+ ....+++++++|.+|+. +
T Consensus 201 ~Y~aPE~~~~-~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~l~~-~ 277 (363)
T cd05628 201 DYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPP-EVPISEKAKDLILRFCC-E 277 (363)
T ss_pred cccCHHHHcC-CCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCC-cCCCCHHHHHHHHHHcC-C
Confidence 9999999987 568999999999999999996 887666555554444322 22333 23457789999998765 4
Q ss_pred CC---CCCCHHHHHhccCCCCchHHHHH
Q 000993 674 PS---DRPSATELLQDALPPQMEYELLD 698 (1196)
Q Consensus 674 P~---~RPta~eiL~~~~~~~~~~~~~~ 698 (1196)
|. .||++++|++||||....++.+.
T Consensus 278 ~~~r~~r~~~~ei~~hp~f~~~~~~~~~ 305 (363)
T cd05628 278 WEHRIGAPGVEEIKTNPFFEGVDWEHIR 305 (363)
T ss_pred hhhcCCCCCHHHHhCCCCCCCCCHHHHH
Confidence 44 56899999999999999877553
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-38 Score=372.10 Aligned_cols=273 Identities=24% Similarity=0.398 Sum_probs=212.1
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.|++++.||+|+||+||+|+++.+++.||||+++.... .......+.+|+.+++.++||||++++++|.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~--------- 72 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQD--------- 72 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEec---------
Confidence 68999999999999999999999999999999975432 22345678899999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
..++|+|||||+ |+|.+++.....+++..++.++.||+.||+|||++|
T Consensus 73 -------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~g 121 (381)
T cd05626 73 -------------------------------KDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMG 121 (381)
T ss_pred -------------------------------CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 457899999996 599999988888999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCC----C------C---------CC-------------CCCc
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA----F------P---------TD-------------TGGV 587 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~----~------~---------~~-------------~~~~ 587 (1196)
|+||||||+|||++.++++||+|||+++.+.......... . + .. ....
T Consensus 122 ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (381)
T cd05626 122 FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQ 201 (381)
T ss_pred eeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhcccccccc
Confidence 9999999999999999999999999986442110000000 0 0 00 0000
Q ss_pred cccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-CCCccccCCHHHH
Q 000993 588 SVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LPPSWVAKFSEQE 663 (1196)
Q Consensus 588 ~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-~p~~~~~~~~~l~ 663 (1196)
.....+.+||+.|+|||++.+ ..++.++|||||||++|||++ ||......+........... ..+.....++++.
T Consensus 202 ~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 280 (381)
T cd05626 202 RCLAHSLVGTPNYIAPEVLLR-KGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAV 280 (381)
T ss_pred ccccccccCCccccCHHHHcC-CCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHH
Confidence 001234689999999999987 568999999999999999997 88766555444444322211 1223345678999
Q ss_pred HHHHHcc--cCCCCCCCCHHHHHhccCCCCchHH
Q 000993 664 SLLRRLM--SPSPSDRPSATELLQDALPPQMEYE 695 (1196)
Q Consensus 664 ~LI~~cL--~~dP~~RPta~eiL~~~~~~~~~~~ 695 (1196)
+||.+|+ ..+|..||++.++++|+||.+..+.
T Consensus 281 dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~~~~ 314 (381)
T cd05626 281 DLITKLCCSAEERLGRNGADDIKAHPFFSEVDFS 314 (381)
T ss_pred HHHHHHccCcccccCCCCHHHHhcCcccCCCChh
Confidence 9999955 5556669999999999999987654
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=369.62 Aligned_cols=275 Identities=29% Similarity=0.461 Sum_probs=217.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++.+.||+|+||+||+|++..+|+.||||+++..... ......+.+|+.+++.++||||++++++|.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------- 71 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQ--------- 71 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhee---------
Confidence 4799999999999999999999999999999999754322 234567889999999999999999997763
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
+..++|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 120 (350)
T cd05573 72 -------------------------------DEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKL 120 (350)
T ss_pred -------------------------------cCCeEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999996 59999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCC--------------CCCCCCccccCcCccccccCCCch
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAF--------------PTDTGGVSVDGTGQVGTYFYTAPE 604 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~GT~~Y~APE 604 (1196)
||+||||||+|||++.++.+||+|||+++............. ...............||+.|+|||
T Consensus 121 giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 200 (350)
T cd05573 121 GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPE 200 (350)
T ss_pred CeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHH
Confidence 999999999999999999999999999986543220000000 000000011223457999999999
Q ss_pred hccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhh--hcCCCCCccccCCHHHHHHHHHcccCCCCCCCC
Q 000993 605 IEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLK--QKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 679 (1196)
Q Consensus 605 ~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~--~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt 679 (1196)
++.+ ..++.++|||||||+||||++ ||.............. ....+|. ....++++.+||.+||. ||.+||+
T Consensus 201 ~~~~-~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~~~~~~~li~~ll~-dp~~R~~ 277 (350)
T cd05573 201 VLRG-TPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPP-DPPVSPEAIDLICRLLC-DPEDRLG 277 (350)
T ss_pred HHcC-CCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCC-CCCCCHHHHHHHHHHcc-ChhhcCC
Confidence 9988 578999999999999999997 8876665544444333 2222333 23357899999999997 9999999
Q ss_pred -HHHHHhccCCCCchHHHHH
Q 000993 680 -ATELLQDALPPQMEYELLD 698 (1196)
Q Consensus 680 -a~eiL~~~~~~~~~~~~~~ 698 (1196)
++++++|+|+....++...
T Consensus 278 s~~~ll~hp~~~~~~~~~~~ 297 (350)
T cd05573 278 SFEEIKSHPFFKGIDWENLR 297 (350)
T ss_pred CHHHHhcCCCcCCCCHHHHh
Confidence 9999999999998776443
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-38 Score=357.09 Aligned_cols=258 Identities=27% Similarity=0.420 Sum_probs=206.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.|+..+.||+|+||+||+|.++.+|+.||||++...... ......+.+|+.+++.++||||++++++|.+
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~--------- 71 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYET--------- 71 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEcc---------
Confidence 378899999999999999999999999999998754322 2223467899999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...++++||||+ |+|.+++... ..+++..++.++.||+.||+|||+
T Consensus 72 -------------------------------~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 120 (285)
T cd05631 72 -------------------------------KDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQR 120 (285)
T ss_pred -------------------------------CCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 356899999997 5888777543 368999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++.+||+|||++....... ......||+.|+|||++.+ ..++.++|
T Consensus 121 ~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~g~~~y~aPE~~~~-~~~~~~~D 183 (285)
T cd05631 121 ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE----------------TVRGRVGTVGYMAPEVINN-EKYTFSPD 183 (285)
T ss_pred CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC----------------eecCCCCCCCccCHhhhcC-CCCCcccC
Confidence 999999999999999999999999999997542110 1134579999999999987 57899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHH---HHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhc
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQ---IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQD 686 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~---~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~ 686 (1196)
||||||++|||++ ||....... ....... . .........++++.+||++||+.||.+||+ ++++++|
T Consensus 184 vwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~-~-~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 184 WWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVK-E-DQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred chhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhh-c-ccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 9999999999996 776543321 1111111 1 111222345678999999999999999997 9999999
Q ss_pred cCCCCchHHHHH
Q 000993 687 ALPPQMEYELLD 698 (1196)
Q Consensus 687 ~~~~~~~~~~~~ 698 (1196)
+||.+..+..+.
T Consensus 262 ~~~~~~~~~~~~ 273 (285)
T cd05631 262 PIFKNINFKRLE 273 (285)
T ss_pred HhhcCCCHHHHH
Confidence 999998876554
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-38 Score=370.20 Aligned_cols=275 Identities=28% Similarity=0.465 Sum_probs=215.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++++.||+|+||+||+|+++.+|+.||||++..... .......+.+|+.+|+.++||||++++++|.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~--------- 71 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQ--------- 71 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE---------
Confidence 479999999999999999999999999999999975432 2233456788999999999999999998873
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...++|+|||||+ |+|.+++...+.+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~ 120 (364)
T cd05599 72 -------------------------------DENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKL 120 (364)
T ss_pred -------------------------------cCCeEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999996 58999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCC---------------CCCCCC--------CccccCcCcc
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA---------------FPTDTG--------GVSVDGTGQV 595 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~---------------~~~~~~--------~~~~~~~~~~ 595 (1196)
||+||||||+|||++.++.+||+|||+++.+.......... .+.... .......+.+
T Consensus 121 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (364)
T cd05599 121 GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTV 200 (364)
T ss_pred CeEeccCCHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccc
Confidence 99999999999999999999999999997653221100000 000000 0000112357
Q ss_pred ccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccc
Q 000993 596 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMS 671 (1196)
Q Consensus 596 GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~ 671 (1196)
||+.|+|||++.+ ..++.++|||||||++|||++ ||......+............+ +.....++++.+||++||.
T Consensus 201 gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~ 279 (364)
T cd05599 201 GTPDYIAPEVFLQ-TGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC 279 (364)
T ss_pred cCccccCHHHHcC-CCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc
Confidence 9999999999987 568999999999999999997 7876655554444333222211 2223457899999999997
Q ss_pred CCCCCCCC---HHHHHhccCCCCchHHHH
Q 000993 672 PSPSDRPS---ATELLQDALPPQMEYELL 697 (1196)
Q Consensus 672 ~dP~~RPt---a~eiL~~~~~~~~~~~~~ 697 (1196)
+|.+|++ +.++++|+||....+..+
T Consensus 280 -~p~~R~~~~~~~~ll~h~~~~~~~~~~~ 307 (364)
T cd05599 280 -EAERRLGNNGVNEIKSHPFFKGVDWEHI 307 (364)
T ss_pred -CHhhcCCCCCHHHHhcCCCcCCCCHHHH
Confidence 9999998 999999999999876643
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-38 Score=355.08 Aligned_cols=257 Identities=25% Similarity=0.392 Sum_probs=200.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc---CCCCeeeeeeeeeecCccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKL-DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL---QHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~-~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L---~HpnIV~l~~~~~e~~~~~ 456 (1196)
++|++.+.||+|+||+||+|++.. +|+.||+|+++...........+.+|+.+++.+ +||||++++++|....
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~--- 77 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR--- 77 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEeccc---
Confidence 378999999999999999999854 478899999876544333344566787777766 6999999998874211
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~y 534 (1196)
......+++||||++++|.+++... ..+++..++.++.||+.||+|
T Consensus 78 --------------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~ 125 (290)
T cd07862 78 --------------------------------TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDF 125 (290)
T ss_pred --------------------------------CCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 0123568999999999999998753 458999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++.+||+|||+++..... .......||+.|+|||++.+ ..++.
T Consensus 126 lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----------------~~~~~~~~~~~y~aPE~~~~-~~~~~ 188 (290)
T cd07862 126 LHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ----------------MALTSVVVTLWYRAPEVLLQ-SSYAT 188 (290)
T ss_pred HHHCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCC----------------cccccccccccccChHHHhC-CCCCC
Confidence 99999999999999999999999999999999754211 11234578999999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC-CC-----------------------ccccCCHHHHHHHH
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PP-----------------------SWVAKFSEQESLLR 667 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~-p~-----------------------~~~~~~~~l~~LI~ 667 (1196)
++|||||||++|||++ ||......+....+....... +. .....++.+++||.
T Consensus 189 ~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 268 (290)
T cd07862 189 PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLL 268 (290)
T ss_pred ccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHH
Confidence 9999999999999996 676555444333332211100 00 01234557789999
Q ss_pred HcccCCCCCCCCHHHHHhccCC
Q 000993 668 RLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
+||+.||++|||+.++|+||||
T Consensus 269 ~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 269 KCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred HHhccCchhcCCHHHHhcCCCC
Confidence 9999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-39 Score=368.62 Aligned_cols=243 Identities=29% Similarity=0.459 Sum_probs=199.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
..+.+++.||+|.||+||+|.+. ....||+|.++....+ .+.|.+|+++|++|+|+|||+++++|..
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~m~---~~~f~~Ea~iMk~L~H~~lV~l~gV~~~--------- 272 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEGSMS---PEAFLREAQIMKKLRHEKLVKLYGVCTK--------- 272 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEc-CCCcccceEEeccccC---hhHHHHHHHHHHhCcccCeEEEEEEEec---------
Confidence 45677889999999999999997 3348999999754332 4678899999999999999999999843
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|||||||+ |+|.++|+. ...+...+.+.++.|||+||+||++
T Consensus 273 -------------------------------~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes 321 (468)
T KOG0197|consen 273 -------------------------------QEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLES 321 (468)
T ss_pred -------------------------------CCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHh
Confidence 235899999996 899999987 4569999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+++|||||..+|||++++..+||+|||+|+....+... ...+..-..-|.|||++.. ..++.|||
T Consensus 322 ~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~--------------~~~~~kfPIkWtAPEa~~~-~~FS~kSD 386 (468)
T KOG0197|consen 322 KNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYT--------------ASEGGKFPIKWTAPEALNY-GKFSSKSD 386 (468)
T ss_pred CCccchhhhhhheeeccCceEEEcccccccccCCCcee--------------ecCCCCCCceecCHHHHhh-CCcccccc
Confidence 99999999999999999999999999999954433211 1122334567999999987 67999999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHH
Q 000993 618 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 684 (1196)
Q Consensus 618 VwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL 684 (1196)
||||||+||||+| |+......+. +..+. .+...|.+..+++++.++|..||..+|++|||++.+.
T Consensus 387 VWSFGVlL~E~fT~G~~py~~msn~ev-~~~le-~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 387 VWSFGVLLWELFTYGRVPYPGMSNEEV-LELLE-RGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred eeehhhhHHHHhccCCCCCCCCCHHHH-HHHHh-ccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 9999999999997 6655555444 44444 3343444556888999999999999999999999665
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=336.46 Aligned_cols=253 Identities=28% Similarity=0.460 Sum_probs=221.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
-+++|++.+.||+|-||.||+|+.+.++..||+|++.+... ......++.||+++-+.|+||||+++|++|.+
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd------ 93 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHD------ 93 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheec------
Confidence 36899999999999999999999999999999999975542 23345689999999999999999999999843
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHh--hcCCCCHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFE--SYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~--~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|+++||.+ |.+...|. ...+|++..++.|+.|+|.||.|
T Consensus 94 ----------------------------------~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y 139 (281)
T KOG0580|consen 94 ----------------------------------SKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLY 139 (281)
T ss_pred ----------------------------------cceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHH
Confidence 567899999996 79999998 66789999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
+|..+||||||||+|+|++..+.+||+|||.+..-. ....++.|||..|.|||...+ ..++.
T Consensus 140 ~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-----------------~~kR~tlcgt~dyl~pEmv~~-~~hd~ 201 (281)
T KOG0580|consen 140 CHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----------------SNKRKTLCGTLDYLPPEMVEG-RGHDK 201 (281)
T ss_pred hccCCcccCCCCHHHhccCCCCCeeccCCCceeecC-----------------CCCceeeecccccCCHhhcCC-CCccc
Confidence 999999999999999999999999999999986421 123567899999999999998 57899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
.+|+|++|++.||++. ||......+...++......+| ..++.++++||.+|+..+|.+|.+..+++.|||...
T Consensus 202 ~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p---~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 202 FVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP---STISGGAADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred hhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC---cccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 9999999999999985 8988887777777666565666 455679999999999999999999999999999764
Q ss_pred c
Q 000993 692 M 692 (1196)
Q Consensus 692 ~ 692 (1196)
.
T Consensus 279 ~ 279 (281)
T KOG0580|consen 279 N 279 (281)
T ss_pred c
Confidence 3
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=394.60 Aligned_cols=277 Identities=24% Similarity=0.411 Sum_probs=231.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+||+++++||+|+||.|.+++++.+++.||+|++++-... ......|..|-.+|..-+.+-|++++-+|
T Consensus 75 ~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAF---------- 144 (1317)
T KOG0612|consen 75 EDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAF---------- 144 (1317)
T ss_pred HhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHh----------
Confidence 7999999999999999999999999999999998753211 22345688888999999999999998776
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
++..++|+||||++ |+|..++.+.+++++..+++|+..|+.||.-||+.
T Consensus 145 ------------------------------QD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~m 194 (1317)
T KOG0612|consen 145 ------------------------------QDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSM 194 (1317)
T ss_pred ------------------------------cCccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhc
Confidence 56789999999996 59999999999999999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC----CCCCCC
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKIDE 614 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~s~ 614 (1196)
|+|||||||+|||||..||+||+|||.|-.+..++. ......+|||.|.+||+|+. .+.|++
T Consensus 195 gyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~--------------V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ 260 (1317)
T KOG0612|consen 195 GYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGT--------------VRSSVAVGTPDYISPEVLQSQGDGKGEYGR 260 (1317)
T ss_pred cceeccCCcceeEecccCcEeeccchhHHhcCCCCc--------------EEeccccCCCCccCHHHHHhhcCCccccCC
Confidence 999999999999999999999999999987653321 22355799999999999863 256999
Q ss_pred cchhHHHHHHHHHhh---cCCchhHHHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHcccCCCCCCCC---HHHHHhc
Q 000993 615 KADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPSPSDRPS---ATELLQD 686 (1196)
Q Consensus 615 ksDVwSlGviLyELl---tPf~~~~~~~~~~~~l~~~--~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt---a~eiL~~ 686 (1196)
.+||||+||++|||+ |||+...-.+.+-+++..+ ..+| ....++.++++||+++++ +|..|.. ++++-.|
T Consensus 261 ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP-~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 261 ECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFP-DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH 338 (1317)
T ss_pred ccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCC-cccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence 999999999999999 5999988877777777663 3456 344588999999999987 4788887 9999999
Q ss_pred cCCCCchHHHHHHH----HHhcCCCCCCcch
Q 000993 687 ALPPQMEYELLDNI----LRMMHSSEDTSIY 713 (1196)
Q Consensus 687 ~~~~~~~~~~~~~~----~~~~~~~~d~~~~ 713 (1196)
|||.+..|+.+... ...+.++.|.+.+
T Consensus 339 pFF~g~~W~~iR~~~pP~vPevssd~DTsnF 369 (1317)
T KOG0612|consen 339 PFFEGIDWDNIRESVPPVVPEVSSDDDTSNF 369 (1317)
T ss_pred ccccCCChhhhhhcCCCCCCcCCCCCccccc
Confidence 99999999655442 2233444454444
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-38 Score=361.70 Aligned_cols=248 Identities=25% Similarity=0.394 Sum_probs=205.6
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCCc
Q 000993 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 467 (1196)
Q Consensus 389 LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 467 (1196)
||+|+||.||+|++..+++.||+|+++... ........+.+|+.+++.++||||++++++|.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----------------- 63 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQ----------------- 63 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEe-----------------
Confidence 799999999999999999999999987532 22334567889999999999999999988763
Q ss_pred ccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCC
Q 000993 468 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 546 (1196)
Q Consensus 468 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLK 546 (1196)
....+|+|||||+ ++|.+++.....+++..+..++.||+.||+|||++||+|||||
T Consensus 64 -----------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlk 120 (312)
T cd05585 64 -----------------------SPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLK 120 (312)
T ss_pred -----------------------cCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCC
Confidence 2457899999997 5999999888889999999999999999999999999999999
Q ss_pred cCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHH
Q 000993 547 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 626 (1196)
Q Consensus 547 p~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLy 626 (1196)
|+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||++|
T Consensus 121 p~Nili~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~ 184 (312)
T cd05585 121 PENILLDYQGHIALCDFGLCKLNMKDD---------------DKTNTFCGTPEYLAPELLLG-HGYTKAVDWWTLGVLLY 184 (312)
T ss_pred HHHeEECCCCcEEEEECcccccCccCC---------------CccccccCCcccCCHHHHcC-CCCCCccceechhHHHH
Confidence 999999999999999999987532110 01234579999999999987 56899999999999999
Q ss_pred Hhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC---CHHHHHhccCCCCchHH
Q 000993 627 ELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP---SATELLQDALPPQMEYE 695 (1196)
Q Consensus 627 ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP---ta~eiL~~~~~~~~~~~ 695 (1196)
||++ ||......+...........+| ...++++.+||.+||+.||.+|| ++.++++||||.+..+.
T Consensus 185 el~tg~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~~~~ 256 (312)
T cd05585 185 EMLTGLPPFYDENVNEMYRKILQEPLRFP---DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLSWK 256 (312)
T ss_pred HHHhCCCCcCCCCHHHHHHHHHcCCCCCC---CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCCCHH
Confidence 9997 8876655555444444333333 24567899999999999999997 58999999999987544
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-38 Score=370.99 Aligned_cols=275 Identities=27% Similarity=0.446 Sum_probs=212.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|.+++.||+|+||+||+|+++.+|+.||||++..... .......+.+|+.+++.++|||||+++++|.
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~--------- 71 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQ--------- 71 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEE---------
Confidence 479999999999999999999999999999999864322 2233467888999999999999999998873
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
+..++|+|||||+ |+|.+++.....+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~ 120 (377)
T cd05629 72 -------------------------------DAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKL 120 (377)
T ss_pred -------------------------------cCCeeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2457899999996 59999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhcccccccc--------CCCCCC---------CCC---------------C
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQ--------DAAFPT---------DTG---------------G 586 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~--------~~~~~~---------~~~---------------~ 586 (1196)
||+||||||+|||++.++.+||+|||+++.+....... ...... ... .
T Consensus 121 givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (377)
T cd05629 121 GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKN 200 (377)
T ss_pred CeeccCCCHHHEEECCCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhc
Confidence 99999999999999999999999999997432110000 000000 000 0
Q ss_pred ccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC-CCccccCCHHH
Q 000993 587 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQ 662 (1196)
Q Consensus 587 ~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~~l 662 (1196)
......+.+||+.|+|||++.+ ..++.++|||||||++|||++ ||......+....+......+ .+.....++++
T Consensus 201 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~ 279 (377)
T cd05629 201 RRLMAYSTVGTPDYIAPEIFLQ-QGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEA 279 (377)
T ss_pred ccccccccCCCccccCHHHHcc-CCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHH
Confidence 0001123579999999999987 568999999999999999997 786655544443333211111 12333467799
Q ss_pred HHHHHHcccCCCCCC---CCHHHHHhccCCCCchHHHH
Q 000993 663 ESLLRRLMSPSPSDR---PSATELLQDALPPQMEYELL 697 (1196)
Q Consensus 663 ~~LI~~cL~~dP~~R---Pta~eiL~~~~~~~~~~~~~ 697 (1196)
++||.+||. +|.+| +++.++++|+||....++.+
T Consensus 280 ~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~~~~~~ 316 (377)
T cd05629 280 EDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGVDWDTI 316 (377)
T ss_pred HHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCCCHHHH
Confidence 999999998 67665 59999999999998876644
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-38 Score=364.05 Aligned_cols=252 Identities=25% Similarity=0.368 Sum_probs=207.7
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 465 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 465 (1196)
+.||+|+||.||+|+++.+|+.||||++..... .......+.+|+.+++.++||||+++++++.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------------- 65 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQ--------------- 65 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE---------------
Confidence 368999999999999999999999999975422 2234567889999999999999999998763
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccC
Q 000993 466 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544 (1196)
Q Consensus 466 g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrD 544 (1196)
....+|+||||++ ++|.+++.....+++.+++.++.||+.||+|||++||+|||
T Consensus 66 -------------------------~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrD 120 (328)
T cd05593 66 -------------------------TKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRD 120 (328)
T ss_pred -------------------------cCCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecc
Confidence 2457899999996 58998988888899999999999999999999999999999
Q ss_pred CCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHH
Q 000993 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 624 (1196)
Q Consensus 545 LKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGvi 624 (1196)
|||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||+
T Consensus 121 ikp~NIll~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvi 184 (328)
T cd05593 121 LKLENLMLDKDGHIKITDFGLCKEGITDA---------------ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVV 184 (328)
T ss_pred cCHHHeEECCCCcEEEecCcCCccCCCcc---------------cccccccCCcCccChhhhcC-CCCCccCCccccchH
Confidence 99999999999999999999987432110 01234579999999999987 568999999999999
Q ss_pred HHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccCCCCchHHH
Q 000993 625 FFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQMEYEL 696 (1196)
Q Consensus 625 LyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~~~~~~~~~ 696 (1196)
+|||++ ||..................+|. ..++++.+||++||+.||.+|| ++.++++|+||....+..
T Consensus 185 l~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~ 261 (328)
T cd05593 185 MYEMMCGRLPFYNQDHEKLFELILMEDIKFPR---TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQD 261 (328)
T ss_pred HHHHhhCCCCCCCCCHHHHHHHhccCCccCCC---CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCHHH
Confidence 999996 88765554444443333333333 4567899999999999999997 899999999999877653
Q ss_pred H
Q 000993 697 L 697 (1196)
Q Consensus 697 ~ 697 (1196)
.
T Consensus 262 ~ 262 (328)
T cd05593 262 V 262 (328)
T ss_pred H
Confidence 3
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-38 Score=363.65 Aligned_cols=252 Identities=26% Similarity=0.373 Sum_probs=208.1
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 465 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 465 (1196)
+.||+|+||.||+|+++.+|+.||+|+++.... .......+.+|+.+++.++||||++++++|..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~-------------- 66 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-------------- 66 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEec--------------
Confidence 369999999999999999999999999975321 22344567889999999999999999988732
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccC
Q 000993 466 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544 (1196)
Q Consensus 466 g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrD 544 (1196)
...+|+|||||+ ++|..++.....+++..++.++.||+.||+|||++||+|||
T Consensus 67 --------------------------~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~D 120 (323)
T cd05595 67 --------------------------HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 120 (323)
T ss_pred --------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 357899999997 58999998888899999999999999999999999999999
Q ss_pred CCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHH
Q 000993 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 624 (1196)
Q Consensus 545 LKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGvi 624 (1196)
|||+|||++.++.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||+
T Consensus 121 lkp~NIll~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvi 184 (323)
T cd05595 121 IKLENLMLDKDGHIKITDFGLCKEGISDG---------------ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVV 184 (323)
T ss_pred CCHHHEEEcCCCCEEecccHHhccccCCC---------------CccccccCCcCcCCcccccC-CCCCchhchhhhHHH
Confidence 99999999999999999999987431110 01234579999999999987 568999999999999
Q ss_pred HHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccCCCCchHHH
Q 000993 625 FFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQMEYEL 696 (1196)
Q Consensus 625 LyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~~~~~~~~~ 696 (1196)
+|||++ ||..................+|. ..++++.+||++||+.||.+|| ++.++++|+||.+..+..
T Consensus 185 l~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~~~ 261 (323)
T cd05595 185 MYEMMCGRLPFYNQDHERLFELILMEEIRFPR---TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQD 261 (323)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCC---CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCHHH
Confidence 999996 88766555444444433333333 4567999999999999999998 899999999999887653
Q ss_pred H
Q 000993 697 L 697 (1196)
Q Consensus 697 ~ 697 (1196)
.
T Consensus 262 ~ 262 (323)
T cd05595 262 V 262 (323)
T ss_pred H
Confidence 3
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-38 Score=364.53 Aligned_cols=258 Identities=30% Similarity=0.507 Sum_probs=224.4
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGV 454 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~ 454 (1196)
......|++.+.||+|.||.||+|+++.+|+.+|+|++...... ......+.+|+.+|+.+. |||||.++++|-
T Consensus 31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e---- 106 (382)
T KOG0032|consen 31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFE---- 106 (382)
T ss_pred ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEE----
Confidence 44557899999999999999999999999999999999765532 234568999999999998 999999999883
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
+...+|+|||+|. |.|.+.+... .+++..+..++.||+.+++
T Consensus 107 ------------------------------------~~~~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~ 149 (382)
T KOG0032|consen 107 ------------------------------------DPDSVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVK 149 (382)
T ss_pred ------------------------------------cCCeEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHH
Confidence 3457899999996 6899988776 4999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCC----CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDAR----NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~----~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
|||+.||+||||||+|+|+... +.+|++|||+|...... ......+|||.|+|||++..
T Consensus 150 ~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~----------------~~~~~~~Gtp~y~APEvl~~- 212 (382)
T KOG0032|consen 150 YLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPG----------------ERLHTIVGTPEYVAPEVLGG- 212 (382)
T ss_pred HHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCC----------------ceEeeecCCccccCchhhcC-
Confidence 9999999999999999999654 47999999999876431 12356799999999999997
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
..|+..+||||+||++|.|++ ||...........+......++ +.|...+..++++|++||..||.+|+|+.++|+
T Consensus 213 ~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 213 RPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred CCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 579999999999999999985 9999888888887777666654 578888999999999999999999999999999
Q ss_pred ccCCCCc
Q 000993 686 DALPPQM 692 (1196)
Q Consensus 686 ~~~~~~~ 692 (1196)
|||....
T Consensus 293 HpWi~~~ 299 (382)
T KOG0032|consen 293 HPWIKSI 299 (382)
T ss_pred CccccCC
Confidence 9997764
|
|
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-38 Score=369.64 Aligned_cols=272 Identities=25% Similarity=0.419 Sum_probs=212.4
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.|+++++||+|+||+||+|+++.+++.||+|++..... .......+.+|+.+++.++|||||+++++|.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~--------- 72 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQD--------- 72 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEe---------
Confidence 58999999999999999999999999999999875432 22344678899999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
..++|+|||||+ |+|.+++.+.+.+++..++.++.||+.||+|||++|
T Consensus 73 -------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ 121 (382)
T cd05625 73 -------------------------------KDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMG 121 (382)
T ss_pred -------------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 457899999996 589999988888999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCC-----------CCCCC---------------------CCCc
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA-----------AFPTD---------------------TGGV 587 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~-----------~~~~~---------------------~~~~ 587 (1196)
|+||||||+|||++.++++||+|||+|+.+......... .+... ....
T Consensus 122 ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (382)
T cd05625 122 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQ 201 (382)
T ss_pred eecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccc
Confidence 999999999999999999999999998643211000000 00000 0000
Q ss_pred cccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC-CCccccCCHHHH
Q 000993 588 SVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQE 663 (1196)
Q Consensus 588 ~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~~l~ 663 (1196)
.....+.+||+.|+|||++.+ ..|+.++|||||||+||||++ ||......+............ .+.....++++.
T Consensus 202 ~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~ 280 (382)
T cd05625 202 RCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEAS 280 (382)
T ss_pred cccccccccCcccCCHHHhcC-CCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHH
Confidence 001134579999999999987 568999999999999999997 887666555544444322221 223345678999
Q ss_pred HHHHHcccCCCCCCCC---HHHHHhccCCCCchHH
Q 000993 664 SLLRRLMSPSPSDRPS---ATELLQDALPPQMEYE 695 (1196)
Q Consensus 664 ~LI~~cL~~dP~~RPt---a~eiL~~~~~~~~~~~ 695 (1196)
++|.+|+ .+|.+|++ +.++++|+||....+.
T Consensus 281 ~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~~~ 314 (382)
T cd05625 281 DLIIKLC-RGPEDRLGKNGADEIKAHPFFKTIDFS 314 (382)
T ss_pred HHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCcChH
Confidence 9999976 59999997 9999999999987654
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >PRK12305 thrS threonyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=382.98 Aligned_cols=350 Identities=13% Similarity=0.117 Sum_probs=271.5
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec--CCCcccccceEEEeecCCceEeecCCCcHH
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELRLP 812 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRPD~T~~ 812 (1196)
..+.|++||+|.++.+++.|++.++++|++|||++|.||+| ++. ++.+...++||+|.|.+|+.++|||+.|++
T Consensus 193 ~~~~G~~~~~p~~~~~~~~l~~~~~~~~~~~Gy~ev~tP~le~~~l~~~sg~~~~~~~~my~~~d~~~~~~~LRP~~~~~ 272 (575)
T PRK12305 193 EIGPGLPVWHPKGAIIRREIEDYLRKEHLKRGYEFVYTPHIGKSDLWKTSGHLDNYKENMFPPMEIDEEEYYLKPMNCPG 272 (575)
T ss_pred ccCCcceEEeccHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHhhcCCcccchhhcccccccCCceEEEecCCCHH
Confidence 35889999999999999999999999999999999999999 332 345577899999999999999999988888
Q ss_pred HHHHHHhCC----CCceeEEEecCeeecCCCC-----CCCcceeEeEEEEeCCCCccch--HHHHHHHHHHHHHcCCCCc
Q 000993 813 FIRWAISNQ----KSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAES 881 (1196)
Q Consensus 813 iaR~~a~~~----~~P~r~~Y~G~VfR~e~~~-----~~~~ef~Q~GvEiiG~~~~~aD--aEvI~la~~~L~~lgi~~~ 881 (1196)
++|+++++. ..|+|+||+|+|||+|+++ .|.+||+|+|+|+||..++.+| +|+|.++.++|+.||+++
T Consensus 273 ~~~~~~~~~~s~~~lP~r~~~~g~~fR~E~~~~~~Gl~R~reF~q~~~~if~~~~~~~~e~~e~i~l~~~~~~~lgl~~- 351 (575)
T PRK12305 273 HILIYKSRLRSYRDLPLRLAEFGTVYRYEKSGVLHGLTRVRGFTQDDAHIFCTPDQIEDEILKVLDFVLELLKDFGFKD- 351 (575)
T ss_pred HHHHHhcccCChhhCCHhhEEecccccCCCCCCCcCcccccCeEEcceEEEeCHHHHHHHHHHHHHHHHHHHHHcCCCe-
Confidence 899998743 3599999999999999875 2556799999999999888888 999999999999999985
Q ss_pred eEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCC
Q 000993 882 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 961 (1196)
Q Consensus 882 ~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~ 961 (1196)
+.+.||++.+ +.+ +|..+.|... .+.+..
T Consensus 352 ~~i~l~~r~~-~~~---~g~~~~~~~~---------------------------------------~~~l~~-------- 380 (575)
T PRK12305 352 YYLELSTREP-EKY---VGDDEVWEKA---------------------------------------TEALRE-------- 380 (575)
T ss_pred EEEEEeCCCh-hhc---cCCHHHHHHH---------------------------------------HHHHHH--------
Confidence 9999999765 221 2322211000 000000
Q ss_pred hhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecC-CCCcccccccccc----cc
Q 000993 962 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVK-EKYPATLVEGTLL----AV 1036 (1196)
Q Consensus 962 ~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~-~~~~~~~~~~~~I----~~ 1036 (1196)
.+...|+. ...+.+ +.+||. ..|++...+ .+. .-+.+++ ..
T Consensus 381 -------------------------~l~~~g~~--~~~~~~---~~~~y~-~~~~~~~~d~~g~---~~~~~t~~~~~~~ 426 (575)
T PRK12305 381 -------------------------ALEELGLE--YVEDPG---GAAFYG-PKIDVQIKDALGR---EWQMSTIQLDFNL 426 (575)
T ss_pred -------------------------HHHhcCCC--cEecCC---Cccccc-ccEEEEeeccCCC---ceeccceeeeccc
Confidence 11222332 234555 778885 557774432 222 1111233 35
Q ss_pred ccccch-hhhhccccccccccCCCCCCCcc---eecccHHHHHhhccC---CCCCCCCCCCceEEEEEcCCCchHHHHHH
Q 000993 1037 GGRYDY-LLHRMWDREYVGYASRTNPPSGV---GASLALETIIQHYPV---DFKPVRNEAGTSVLVCSRGGGGLLVERME 1109 (1196)
Q Consensus 1037 GGRYD~-L~~~fg~~~~~~~~g~~~~~pAv---Gfaiglerl~~~L~~---~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ 1109 (1196)
++|||- ++. ..|. ...|++ |++-++|||+.+|.+ +..+.+ .++.+|+|++.+ ++...+|.+
T Consensus 427 ~~~fdl~y~~---------~~~~-~~~p~~ih~~~~G~~eRl~~~l~e~~~~~~p~~-~~p~~v~Ii~~~-~~~~~~a~~ 494 (575)
T PRK12305 427 PERFDLEYTA---------EDGK-RQRPVMIHRALFGSIERFIGILTEHYAGAFPFW-LAPVQVVIIPVA-DAHNEYAEE 494 (575)
T ss_pred HhhCCCEEEC---------CCCC-ccCceEEEccccccHHHHHHHHHHHhCCCCCCC-CCCccEEEEEeC-hHHHHHHHH
Confidence 689994 422 2222 235878 777789999999863 222322 457789999996 677889999
Q ss_pred HHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 000993 1110 LVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1187 (1196)
Q Consensus 1110 ~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~ 1187 (1196)
++++||++|++|++++. +.++++++++|++.|+|++|++|++|.++|+|+||||.+++|..++++++++.|++.+++
T Consensus 495 i~~~Lr~~gi~v~~d~~-~~~l~kk~~~A~~~g~p~~iivG~~E~~~~~v~vr~~~~~~q~~v~~~~l~~~l~~~~~~ 571 (575)
T PRK12305 495 VAKKLRAAGIRVEVDTS-NERLNKKIRNAQKQKIPYMLVVGDKEVEAGTVSVRTRDGEQLNGMPLDEFIELIKEKIAE 571 (575)
T ss_pred HHHHHHHCCCEEEEECC-CCCHHHHHHHHHhcCCCEEEEEechhhhCCEEEEEEcCCCceeeeeHHHHHHHHHHHHhc
Confidence 99999999999998877 678999999999999999999999999999999999999999999999999999888775
|
|
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=364.10 Aligned_cols=260 Identities=29% Similarity=0.423 Sum_probs=204.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++.+.||+|+||.||+|.+..+|+.||||++............+.+|+.+++.++||||++++++|....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 93 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQK----- 93 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC-----
Confidence 468999999999999999999999999999999999755444455667889999999999999999998874321
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
.......+|+||||++++|.+.+.. .+++..+..++.||+.||+|||++
T Consensus 94 -----------------------------~~~~~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~ 142 (359)
T cd07876 94 -----------------------------SLEEFQDVYLVMELMDANLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSA 142 (359)
T ss_pred -----------------------------CccccceeEEEEeCCCcCHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhC
Confidence 0012346799999999988887743 488999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++..... .......||+.|+|||++.+ ..++.++||
T Consensus 143 ~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~----------------~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di 205 (359)
T cd07876 143 GIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN----------------FMMTPYVVTRYYRAPEVILG-MGYKENVDI 205 (359)
T ss_pred CcccCCCCHHHEEECCCCCEEEecCCCccccccC----------------ccCCCCcccCCCCCchhccC-CCCCcchhh
Confidence 9999999999999999999999999999753211 11234578999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHh----------------------hhcCCCC--------Ccc---------c
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDL----------------------KQKGELP--------PSW---------V 656 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l----------------------~~~~~~p--------~~~---------~ 656 (1196)
|||||++|+|++ ||............. ......+ +.| .
T Consensus 206 wSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (359)
T cd07876 206 WSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDK 285 (359)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhcccccccccccccc
Confidence 999999999996 776443221111100 0011110 000 1
Q ss_pred cCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 657 AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 657 ~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
..++.+++||.+||+.||.+|||+.++|+|||+..
T Consensus 286 ~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 286 LKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV 320 (359)
T ss_pred ccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence 12357899999999999999999999999999874
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=369.54 Aligned_cols=251 Identities=21% Similarity=0.308 Sum_probs=200.0
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
...+|++++.||+|+||.||+|++..+++.||+|+.. ...+.+|+.+|+.++|||||+++++|..
T Consensus 90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~--------~~~~~~E~~il~~l~HpnIv~~~~~~~~------- 154 (391)
T PHA03212 90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ--------RGGTATEAHILRAINHPSIIQLKGTFTY------- 154 (391)
T ss_pred ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh--------hhhhHHHHHHHHhCCCCCCCCEeEEEEE-------
Confidence 3468999999999999999999999999999999643 2346789999999999999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....+++||++.++|..++.....+++..++.++.||+.||+|||++
T Consensus 155 ---------------------------------~~~~~lv~e~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~ 201 (391)
T PHA03212 155 ---------------------------------NKFTCLILPRYKTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHEN 201 (391)
T ss_pred ---------------------------------CCeeEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 34679999999999999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+|+...... .......+||+.|+|||++.+ ..++.++||
T Consensus 202 ~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di 266 (391)
T PHA03212 202 RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN--------------ANKYYGWAGTIATNAPELLAR-DPYGPAVDI 266 (391)
T ss_pred CcccCCCChHhEEEcCCCCEEEEeCCccccccccc--------------ccccccccCccCCCChhhhcC-CCCCcHHHH
Confidence 99999999999999999999999999997532110 001234579999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhH-------HHHHHHHHhhhc--------------------------CCCC---Ccc---c
Q 000993 619 YSLGIVFFELWH---PFSTAM-------ERQIVLSDLKQK--------------------------GELP---PSW---V 656 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~-------~~~~~~~~l~~~--------------------------~~~p---~~~---~ 656 (1196)
|||||++|||++ ||.... ........+... ...+ +.+ .
T Consensus 267 wSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (391)
T PHA03212 267 WSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLY 346 (391)
T ss_pred HHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHh
Confidence 999999999996 443211 000000000000 0001 111 1
Q ss_pred cCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 657 AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 657 ~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
..+.++.+||.+||+.||.+|||+.++|+|+||...
T Consensus 347 ~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~ 382 (391)
T PHA03212 347 ELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDI 382 (391)
T ss_pred hhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccC
Confidence 233478899999999999999999999999999764
|
|
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-38 Score=361.71 Aligned_cols=264 Identities=25% Similarity=0.395 Sum_probs=213.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|.+.+.||+|+||+||+|+++.+|+.||||+++.... .......+.+|+.+++.++||||+++++++.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~--------- 71 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQ--------- 71 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEe---------
Confidence 479999999999999999999999999999999975432 2234456888999999999999999998763
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
+...+|+|||||+ ++|.+++... ..+++..++.++.||+.||+|||+
T Consensus 72 -------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~ 120 (330)
T cd05601 72 -------------------------------DKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQ 120 (330)
T ss_pred -------------------------------cCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2456899999996 5999999876 679999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC-----CCCC
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG-----WPKI 612 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~~ 612 (1196)
+||+||||||+|||++.++.+||+|||++..+..... .......||+.|+|||++.. ...+
T Consensus 121 ~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 186 (330)
T cd05601 121 MGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM--------------VNSKLPVGTPDYIAPEVLTTMNGDGKGTY 186 (330)
T ss_pred CCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc--------------eeeecccCCccccCHHHhccccccccCCC
Confidence 9999999999999999999999999999976532110 01123478999999999873 2457
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-CCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
+.++|||||||++|||++ ||.................. ..+.....++++.+||.+||+ +|.+|||+.++++|+|
T Consensus 187 ~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~ 265 (330)
T cd05601 187 GVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPF 265 (330)
T ss_pred CCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCC
Confidence 899999999999999997 88765554444333322211 112333467789999999998 9999999999999999
Q ss_pred CCCchHHHHHH
Q 000993 689 PPQMEYELLDN 699 (1196)
Q Consensus 689 ~~~~~~~~~~~ 699 (1196)
|....+..+..
T Consensus 266 ~~~~~~~~~~~ 276 (330)
T cd05601 266 FSKIDWNNIRN 276 (330)
T ss_pred cCCCCHHHHhh
Confidence 99987765543
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=366.81 Aligned_cols=263 Identities=28% Similarity=0.383 Sum_probs=209.0
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||+|+||.||+|.+..+|+.||||++...........++.+|+.+++.++||||+++++++.....
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------- 73 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHI------- 73 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCc-------
Confidence 5788999999999999999999999999999986543343445678899999999999999999988732210
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCc
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 541 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIi 541 (1196)
.....+|+||||++++|.+.+.....+++..++.++.||+.||+|||++||+
T Consensus 74 ----------------------------~~~~~~~lv~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iv 125 (372)
T cd07853 74 ----------------------------DPFEEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGIL 125 (372)
T ss_pred ----------------------------cccceEEEEeeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 0123679999999999999998888899999999999999999999999999
Q ss_pred ccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHH
Q 000993 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621 (1196)
Q Consensus 542 HrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSl 621 (1196)
||||||+|||++.++.+||+|||+++...... ........+|+.|+|||++.+...++.++|||||
T Consensus 126 H~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diwsl 191 (372)
T cd07853 126 HRDIKPGNLLVNSNCVLKICDFGLARVEEPDE--------------SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSV 191 (372)
T ss_pred CCCCChHHEEECCCCCEEeccccceeecccCc--------------cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhH
Confidence 99999999999999999999999997542111 0112334689999999999875668999999999
Q ss_pred HHHHHHhhc---CCchhHHHHHHHHHh----------------------hhcCCCCCc-------cccCCHHHHHHHHHc
Q 000993 622 GIVFFELWH---PFSTAMERQIVLSDL----------------------KQKGELPPS-------WVAKFSEQESLLRRL 669 (1196)
Q Consensus 622 GviLyELlt---Pf~~~~~~~~~~~~l----------------------~~~~~~p~~-------~~~~~~~l~~LI~~c 669 (1196)
||++|||++ ||...........+. ......++. ....++++.+||.+|
T Consensus 192 G~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~m 271 (372)
T cd07853 192 GCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRM 271 (372)
T ss_pred HHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHh
Confidence 999999996 776544332221111 111111111 122456889999999
Q ss_pred ccCCCCCCCCHHHHHhccCCCCch
Q 000993 670 MSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 670 L~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
|+.||.+|||+.++++|+|+....
T Consensus 272 L~~dP~~R~t~~e~l~hp~~~~~~ 295 (372)
T cd07853 272 LVFDPDKRISAADALAHPYLDEGR 295 (372)
T ss_pred CCCChhhCcCHHHHhcCHhhCCCc
Confidence 999999999999999999998754
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-38 Score=369.69 Aligned_cols=275 Identities=24% Similarity=0.402 Sum_probs=213.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++++.||+|+||.||+|+++.+++.||||++..... .......+.+|+.+|+.++||||+++++.|.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~--------- 71 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQ--------- 71 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEE---------
Confidence 479999999999999999999999999999999864322 1123456889999999999999999998873
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
+...+|+|||||+ |+|.+++...+.+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~ 120 (376)
T cd05598 72 -------------------------------DKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKM 120 (376)
T ss_pred -------------------------------cCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999996 59999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhcccccccc---------C--CCCCCCC-----------------CCcccc
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQ---------D--AAFPTDT-----------------GGVSVD 590 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~---------~--~~~~~~~-----------------~~~~~~ 590 (1196)
||+||||||+|||++.++.+||+|||+|..+....... . ....... ......
T Consensus 121 ~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (376)
T cd05598 121 GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCL 200 (376)
T ss_pred CeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhccccc
Confidence 99999999999999999999999999986432100000 0 0000000 000011
Q ss_pred CcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC-CCccccCCHHHHHHH
Q 000993 591 GTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLL 666 (1196)
Q Consensus 591 ~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~~l~~LI 666 (1196)
....+||+.|||||++.+ ..++.++|||||||++|||++ ||......+............ .+.....++++.++|
T Consensus 201 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 279 (376)
T cd05598 201 AHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLI 279 (376)
T ss_pred ccccCCCccccCHHHHcC-CCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHH
Confidence 234589999999999987 568999999999999999997 887666554433333222221 223345678899999
Q ss_pred HHcccCCCCCCC---CHHHHHhccCCCCchHHHH
Q 000993 667 RRLMSPSPSDRP---SATELLQDALPPQMEYELL 697 (1196)
Q Consensus 667 ~~cL~~dP~~RP---ta~eiL~~~~~~~~~~~~~ 697 (1196)
.+|+ .+|.+|+ ++.++++|+||.+..+...
T Consensus 280 ~~l~-~~p~~R~~~~t~~ell~h~~~~~~~~~~~ 312 (376)
T cd05598 280 LRLC-CGAEDRLGKNGADEIKAHPFFKGIDFASL 312 (376)
T ss_pred HHHh-cCHhhcCCCCCHHHHhCCCCcCCCCHHHH
Confidence 9976 5999999 9999999999999876544
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=375.34 Aligned_cols=258 Identities=23% Similarity=0.348 Sum_probs=201.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.+|.+.+.||+|+||.||+|.+..+++.||||++.... ....+|+.+|+.++|||||+++++|.....
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~------ 133 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECF------ 133 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeeccc------
Confidence 57999999999999999999999999999999885321 224579999999999999999987643210
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE----SYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~----~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
.......++++|||||+++|.+++. ....+++..++.++.||+.||+|||
T Consensus 134 --------------------------~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH 187 (440)
T PTZ00036 134 --------------------------KKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH 187 (440)
T ss_pred --------------------------ccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0012235688999999998887765 3456999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCC-CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 537 GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
++||+||||||+|||++.++ .+||+|||+|+.+.... ......||+.|+|||++.+...|+.+
T Consensus 188 ~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~----------------~~~~~~~t~~y~aPE~~~~~~~~~~~ 251 (440)
T PTZ00036 188 SKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQ----------------RSVSYICSRFYRAPELMLGATNYTTH 251 (440)
T ss_pred HCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCC----------------CcccCCCCcCccCHHHhcCCCCCCcH
Confidence 99999999999999999765 69999999998653211 12345789999999998875578999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcC-----------------CCCC----c-----cccCCHHHHHHH
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG-----------------ELPP----S-----WVAKFSEQESLL 666 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~-----------------~~p~----~-----~~~~~~~l~~LI 666 (1196)
+|||||||+||||++ ||......+....++...+ .+|. . ....++++.+||
T Consensus 252 ~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li 331 (440)
T PTZ00036 252 IDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFI 331 (440)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHH
Confidence 999999999999997 7765544333332221110 0110 0 112456899999
Q ss_pred HHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 667 RRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 667 ~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
.+||+.||.+|||+.++|+||||...
T Consensus 332 ~~~L~~dP~~R~ta~e~l~hp~f~~~ 357 (440)
T PTZ00036 332 SQFLKYEPLKRLNPIEALADPFFDDL 357 (440)
T ss_pred HHHCCCChhHCcCHHHHhCChhHHhh
Confidence 99999999999999999999998754
|
|
| >PRK12444 threonyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=386.11 Aligned_cols=352 Identities=13% Similarity=0.088 Sum_probs=278.7
Q ss_pred cCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec--CCCcccccceEEEeecCCceEeecCCCcH
Q 000993 738 NRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELRL 811 (1196)
Q Consensus 738 ~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRPD~T~ 811 (1196)
++...|+++|+|.+..+++.|++.+++.+.++||++|.||+| ++. ++.+.+.++|| |.|.+|+.++|||+.|+
T Consensus 260 ~~~~~G~~~~~p~g~~~~~~i~~~~~~~~~~~G~~~v~tP~l~~~~l~~~sG~~~~~~~emy-~~d~~~~~~~LrP~~~~ 338 (639)
T PRK12444 260 SEEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQELWERSGHWDHYKDNMY-FSEVDNKSFALKPMNCP 338 (639)
T ss_pred ccccCcceEEeeCHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHhhcCChhhhhhhcC-eecCCCcEEEEccCCCH
Confidence 345789999999999999999999999999999999999999 332 33567789999 88999999999999999
Q ss_pred HHHHHHHhC----CCCceeEEEecCeeecCCCC---C--CCcceeEeEEEEeCCCCccchHH---HHHHHHHHHHHcCCC
Q 000993 812 PFIRWAISN----QKSSFKRYEISSVYRRAIGH---S--PPNRYLQGDFDIIGGASALTEAE---VLKVTMDIVTRFFHA 879 (1196)
Q Consensus 812 ~iaR~~a~~----~~~P~r~~Y~G~VfR~e~~~---~--~~~ef~Q~GvEiiG~~~~~aDaE---vI~la~~~L~~lgi~ 879 (1196)
+++|+++.. +..|+|+||+|+|||+|+++ + |.++|+|.|+|+||..+. +++| ++.++.++++.||+.
T Consensus 339 ~~~~~~~~~~~sy~~LP~r~~~~g~~fR~E~~~~~~Gl~R~reF~q~d~~~f~~~~~-~~~e~~~~~~~~~~i~~~lgl~ 417 (639)
T PRK12444 339 GHMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPDQ-IEDEIKSVMAQIDYVYKTFGFE 417 (639)
T ss_pred HHHHHHhCcccChhhCCceeEEeccccCCCCCcCCcCcceeeeeEEccEEEECCHHH-HHHHHHHHHHHHHHHHHHcCCc
Confidence 999998653 23599999999999999976 3 556799999999998766 6665 999999999999993
Q ss_pred CceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhc
Q 000993 880 ESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFC 959 (1196)
Q Consensus 880 ~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~ 959 (1196)
+.+.++++. -+.+|-++.|.... ..+..
T Consensus 418 --~~~~~~~r~-----~~~~G~~e~~~~~~---------------------------------------~~l~~------ 445 (639)
T PRK12444 418 --YEVELSTRP-----EDSMGDDELWEQAE---------------------------------------ASLEN------ 445 (639)
T ss_pred --EEEEEECCc-----cccCCCHHHHHHHH---------------------------------------HHHHH------
Confidence 999998852 12344433221100 00101
Q ss_pred CChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccc
Q 000993 960 GAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGR 1039 (1196)
Q Consensus 960 g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGR 1039 (1196)
.|...|+ .+.+|.+ ||. || |++|++...... .+..+|+|||
T Consensus 446 ---------------------------~l~~~~~--~y~~~~~--~ga-~Y-~~~~e~~~~~~~------~~~~~~~t~~ 486 (639)
T PRK12444 446 ---------------------------VLQSLNY--KYRLNEG--DGA-FY-GPKIDFHIKDAL------NRSHQCGTIQ 486 (639)
T ss_pred ---------------------------HHHHcCC--CceeccC--Ccc-cc-cceEEEEeecCC------CChhccccee
Confidence 1233344 3567877 888 99 999999876532 2347999999
Q ss_pred cch-hhhhccccccccccCCCCCCCcce---ecccHHHHHhhccC---CCCCCCCCCCceEEEEEcCCC-chHHHHHHHH
Q 000993 1040 YDY-LLHRMWDREYVGYASRTNPPSGVG---ASLALETIIQHYPV---DFKPVRNEAGTSVLVCSRGGG-GLLVERMELV 1111 (1196)
Q Consensus 1040 YD~-L~~~fg~~~~~~~~g~~~~~pAvG---faiglerl~~~L~~---~~~~~~~~~~~~vlv~~~~~~-~~~~~a~~~a 1111 (1196)
||. |-++|+-. +....|. ...|++| |+.++|||+.+|.+ +..+. ..++.+|+|++.+ + ....+|++++
T Consensus 487 ~d~~~~~~f~l~-~~~~~g~-~~~P~i~~~~~~g~ieRli~~L~e~~~~~~p~-~~ap~qV~Ii~~~-~~~~~~~a~~la 562 (639)
T PRK12444 487 LDFQMPEKFDLN-YIDEKNE-KRRPVVIHRAVLGSLDRFLAILIEHFGGAFPA-WLAPVQVKVIPVS-NAVHVQYADEVA 562 (639)
T ss_pred eecccccccceE-EECCCCC-ccccEEEEECCCCCHHHHHHHHHHhcCCCCCC-ccCCceEEEEEcc-cHHHHHHHHHHH
Confidence 998 33444321 1223332 3479999 88899999988842 22222 2468899999986 5 4778999999
Q ss_pred HHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 000993 1112 AELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1187 (1196)
Q Consensus 1112 ~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~ 1187 (1196)
++||++|++|+++.. ++++++++++|++.|+|++|++|++|+++|+|+||+|.+++|..++++++++.+++.+++
T Consensus 563 ~~LR~~Gi~veid~~-~~sl~kq~k~A~k~g~~~~iiiG~~E~~~~~v~vr~~~t~~q~~i~l~el~~~l~~~~~~ 637 (639)
T PRK12444 563 DKLAQAGIRVERDER-DEKLGYKIREAQMQKIPYVLVIGDKEMENGAVNVRKYGEEKSEVIELDMFVESIKEEIKN 637 (639)
T ss_pred HHHHHCCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEEcchhhhcCeEEEEECCCCceeeeeHHHHHHHHHHHhhc
Confidence 999999999998876 679999999999999999999999999999999999999999999999999999888764
|
|
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=364.96 Aligned_cols=275 Identities=26% Similarity=0.420 Sum_probs=215.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++++.||+|+||.||+|+++.+++.||||+++.... .......+.+|+.++..++||||++++++|.
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~--------- 71 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQ--------- 71 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE---------
Confidence 479999999999999999999999999999999974321 2234567888999999999999999998873
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...++|+|||||+ |+|.+++.+...+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~ 120 (360)
T cd05627 72 -------------------------------DKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQL 120 (360)
T ss_pred -------------------------------cCCEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999997 59999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCC----CC-C-------C--------CCCccccCcCccccc
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA----FP-T-------D--------TGGVSVDGTGQVGTY 598 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~----~~-~-------~--------~~~~~~~~~~~~GT~ 598 (1196)
||+||||||+|||++.++++||+|||+++.+.......... .+ . . .........+.+||+
T Consensus 121 givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 200 (360)
T cd05627 121 GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTP 200 (360)
T ss_pred CeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCc
Confidence 99999999999999999999999999997653211000000 00 0 0 000000123458999
Q ss_pred cCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHcccCC
Q 000993 599 FYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPS 673 (1196)
Q Consensus 599 ~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~~~l~~LI~~cL~~d 673 (1196)
.|+|||++.+ ..++.++|||||||++|||++ ||................ ..+|+ ....++++++||.+|+ .|
T Consensus 201 ~Y~APE~~~~-~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~l~-~~ 277 (360)
T cd05627 201 DYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPP-EVPISEKAKDLILRFC-TD 277 (360)
T ss_pred cccCHHHHcC-CCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCC-CCCCCHHHHHHHHHhc-cC
Confidence 9999999987 568999999999999999997 887666555444443322 12232 2235678999999977 49
Q ss_pred CCCCC---CHHHHHhccCCCCchHHHHH
Q 000993 674 PSDRP---SATELLQDALPPQMEYELLD 698 (1196)
Q Consensus 674 P~~RP---ta~eiL~~~~~~~~~~~~~~ 698 (1196)
|.+|+ ++.++++||||.+..+..+.
T Consensus 278 p~~R~~~~~~~ei~~hp~f~~~~~~~~~ 305 (360)
T cd05627 278 SENRIGSNGVEEIKSHPFFEGVDWGHIR 305 (360)
T ss_pred hhhcCCCCCHHHHhcCCCCCCCCHHHHh
Confidence 99998 48999999999999887553
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=358.52 Aligned_cols=257 Identities=26% Similarity=0.384 Sum_probs=210.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCC-CeeeeeeeeeecCccccCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQ-HVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~Hp-nIV~l~~~~~e~~~~~~~~ 459 (1196)
+|++++.||+|+||.||+|+++.+++.||||++..... .....+.+..|..+++.++|+ +|+++++++.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~--------- 71 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ--------- 71 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEE---------
Confidence 58999999999999999999999999999999875321 223345688899999999765 5777877763
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~ 120 (324)
T cd05587 72 -------------------------------TMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSK 120 (324)
T ss_pred -------------------------------cCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2356899999996 59999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++||
T Consensus 121 ~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di 184 (324)
T cd05587 121 GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG---------------KTTRTFCGTPDYIAPEIIAY-QPYGKSVDW 184 (324)
T ss_pred CeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC---------------CceeeecCCccccChhhhcC-CCCCcccch
Confidence 99999999999999999999999999986421110 01234579999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH-----HHHHhccCCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-----TELLQDALPP 690 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta-----~eiL~~~~~~ 690 (1196)
|||||++|||++ ||......+...........+| ...++++.+++++||..||.+|++. .++++|+||.
T Consensus 185 wslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~ 261 (324)
T cd05587 185 WAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP---KSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFR 261 (324)
T ss_pred hhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcC
Confidence 999999999996 8876665555544444333333 2456789999999999999999976 8999999999
Q ss_pred CchHHHH
Q 000993 691 QMEYELL 697 (1196)
Q Consensus 691 ~~~~~~~ 697 (1196)
...+..+
T Consensus 262 ~~~~~~~ 268 (324)
T cd05587 262 RIDWEKL 268 (324)
T ss_pred CCCHHHH
Confidence 9876544
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=359.76 Aligned_cols=252 Identities=26% Similarity=0.404 Sum_probs=206.3
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||+||+|+++.+++.||||+++.... .......+.+|..++..+ +||||+++++++..
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~------------- 67 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQT------------- 67 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEc-------------
Confidence 369999999999999999999999999874321 223345677888888876 79999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~ 120 (320)
T cd05590 68 ---------------------------PDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYR 120 (320)
T ss_pred ---------------------------CCEEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeC
Confidence 456899999997 5999999888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dlkp~NIli~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (320)
T cd05590 121 DLKLDNVLLDHEGHCKLADFGMCKEGIFNG---------------KTTSTFCGTPDYIAPEILQE-MLYGPSVDWWAMGV 184 (320)
T ss_pred CCCHHHeEECCCCcEEEeeCCCCeecCcCC---------------CcccccccCccccCHHHHcC-CCCCCccchhhhHH
Confidence 999999999999999999999987421110 11234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH------HHHHhccCCCCchH
Q 000993 624 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA------TELLQDALPPQMEY 694 (1196)
Q Consensus 624 iLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta------~eiL~~~~~~~~~~ 694 (1196)
++|||++ ||......+............|. ..++++.++|++||+.||.+||++ +++++|+||....+
T Consensus 185 il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~ 261 (320)
T cd05590 185 LLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT---WLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDW 261 (320)
T ss_pred HHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCC---CCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCH
Confidence 9999996 88766655554444432222232 356789999999999999999998 99999999998876
Q ss_pred HHH
Q 000993 695 ELL 697 (1196)
Q Consensus 695 ~~~ 697 (1196)
..+
T Consensus 262 ~~~ 264 (320)
T cd05590 262 EKL 264 (320)
T ss_pred HHH
Confidence 543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=357.11 Aligned_cols=254 Identities=25% Similarity=0.395 Sum_probs=206.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++++.||+|+||.||+|+++.+|..||+|++.... .......+.+|+.+|+.++||||+++++++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 74 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-------- 74 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE--------
Confidence 478999999999999999999999999999999987542 33445679999999999999999999988743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.|++.||.|||+.
T Consensus 75 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 122 (331)
T cd06649 75 --------------------------------DGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK 122 (331)
T ss_pred --------------------------------CCEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 346899999997 49999998888899999999999999999999986
Q ss_pred -CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 539 -GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 539 -gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+|+||||||+|||++.++.+||+|||+++..... ......||+.|+|||++.+ ..++.++|
T Consensus 123 ~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-----------------~~~~~~g~~~y~aPE~~~~-~~~~~~~D 184 (331)
T cd06649 123 HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----------------MANSFVGTRSYMSPERLQG-THYSVQSD 184 (331)
T ss_pred CCEEcCCCChhhEEEcCCCcEEEccCccccccccc-----------------ccccCCCCcCcCCHhHhcC-CCCCchHh
Confidence 6999999999999999999999999998754211 1133578999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhh---------------------------------------------hcC
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLK---------------------------------------------QKG 649 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~---------------------------------------------~~~ 649 (1196)
||||||++|||++ ||......+... .+. ...
T Consensus 185 iwslG~il~el~tg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (331)
T cd06649 185 IWSMGLSLVELAIGRYPIPPPDAKELEA-IFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNE 263 (331)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHH-HhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhC
Confidence 9999999999996 775433322111 000 000
Q ss_pred CCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 650 ELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 650 ~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
..+. .....++++++||++||+.||++|||+.++++|+|+....
T Consensus 264 ~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 308 (331)
T cd06649 264 PPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE 308 (331)
T ss_pred CCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence 0111 1113457899999999999999999999999999987653
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=348.46 Aligned_cols=256 Identities=27% Similarity=0.405 Sum_probs=198.7
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc---CCCCeeeeeeeeeecCccccC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL---QHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L---~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+|++.+.||+|+||+||+|+++.+|+.||+|.++...........+.+|+.+++.+ +||||+++++++....
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~----- 75 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSR----- 75 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeecccc-----
Confidence 48899999999999999999999999999999876443333334566777777665 7999999998874311
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
......++++|||++++|.+++... ..+++..++.++.||+.||+|||
T Consensus 76 ------------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH 125 (288)
T cd07863 76 ------------------------------TDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLH 125 (288)
T ss_pred ------------------------------CCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0124568999999999999988764 34899999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.+ ..++.++
T Consensus 126 ~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~ 188 (288)
T cd07863 126 ANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQM----------------ALTPVVVTLWYRAPEVLLQ-STYATPV 188 (288)
T ss_pred hCCeecCCCCHHHEEECCCCCEEECccCccccccCcc----------------cCCCccccccccCchHhhC-CCCCCcc
Confidence 9999999999999999999999999999997643111 1123468999999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcC----------------CCC--------CccccCCHHHHHHHHHc
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG----------------ELP--------PSWVAKFSEQESLLRRL 669 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~----------------~~p--------~~~~~~~~~l~~LI~~c 669 (1196)
|||||||++|+|++ ||..........+...... ... ......+..+.+||.+|
T Consensus 189 DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 268 (288)
T cd07863 189 DMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEM 268 (288)
T ss_pred hhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHH
Confidence 99999999999996 5554433322222111000 000 01123445678999999
Q ss_pred ccCCCCCCCCHHHHHhccCC
Q 000993 670 MSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 670 L~~dP~~RPta~eiL~~~~~ 689 (1196)
|+.||.+|||+.+++.|+||
T Consensus 269 L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 269 LTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred hccCcccCCCHHHHhcCCCC
Confidence 99999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=356.98 Aligned_cols=257 Identities=26% Similarity=0.390 Sum_probs=211.1
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+|++.+.||+|+||.||+|+++.+++.||||+++.... .......+..|..++..+ +||+|+++++++.
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~--------- 71 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQ--------- 71 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEe---------
Confidence 58899999999999999999999999999999975432 222334567788888877 5888999988763
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....+|+|||||+ |+|.+.+.....+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 120 (323)
T cd05616 72 -------------------------------TMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSK 120 (323)
T ss_pred -------------------------------cCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999996 59999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++||
T Consensus 121 ~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di 184 (323)
T cd05616 121 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG---------------VTTKTFCGTPDYIAPEIIAY-QPYGKSVDW 184 (323)
T ss_pred CEEecCCCHHHeEECCCCcEEEccCCCceecCCCC---------------CccccCCCChhhcCHHHhcC-CCCCCccch
Confidence 99999999999999999999999999987432110 11234579999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhccCCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPP 690 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~~~~~ 690 (1196)
|||||++|||++ ||..................+|. ..++++.+++++||+.||.+|++ ..++++|+||.
T Consensus 185 wSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~ 261 (323)
T cd05616 185 WAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK---SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFR 261 (323)
T ss_pred hchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC---cCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcC
Confidence 999999999996 88766665555544443333333 45678999999999999999997 58999999999
Q ss_pred CchHHHH
Q 000993 691 QMEYELL 697 (1196)
Q Consensus 691 ~~~~~~~ 697 (1196)
...+..+
T Consensus 262 ~~~~~~~ 268 (323)
T cd05616 262 YIDWEKL 268 (323)
T ss_pred CCCHHHH
Confidence 8876644
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=353.43 Aligned_cols=258 Identities=25% Similarity=0.401 Sum_probs=205.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|.+.+.||+|+||.||+|+++.+++.||+|.++..... .....+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 75 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIVHT-------- 75 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC-CcchhHHHHHHHHHhCCCCCcceEEEEEee--------
Confidence 47899999999999999999999999999999998754322 223457789999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+||||++++|.+++... ..+++..++.++.||+.||+|||++
T Consensus 76 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~ 123 (309)
T cd07872 76 --------------------------------DKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRR 123 (309)
T ss_pred --------------------------------CCeEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3467999999999999888654 4589999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++...... .......+|+.|+|||++.+...++.++||
T Consensus 124 ~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 188 (309)
T cd07872 124 KVLHRDLKPQNLLINERGELKLADFGLARAKSVPT---------------KTYSNEVVTLWYRPPDVLLGSSEYSTQIDM 188 (309)
T ss_pred CeecCCCCHHHEEECCCCCEEECccccceecCCCc---------------cccccccccccccCCHHHhCCCCCCcHHHH
Confidence 99999999999999999999999999987532111 011234679999999998775668999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhc-------------------CCCCC--------ccccCCHHHHHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK-------------------GELPP--------SWVAKFSEQESLLRR 668 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~-------------------~~~p~--------~~~~~~~~l~~LI~~ 668 (1196)
|||||++|||++ ||......+......... ...+. .....++++.+||++
T Consensus 189 wslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 268 (309)
T cd07872 189 WGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTK 268 (309)
T ss_pred HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHH
Confidence 999999999997 675543332222111100 00110 112345688999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCch
Q 000993 669 LMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||+.||.+|||+.++++|+||....
T Consensus 269 ~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 269 FLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred hccCChhhCCCHHHHhcChhhhhcc
Confidence 9999999999999999999998654
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-39 Score=365.64 Aligned_cols=256 Identities=26% Similarity=0.387 Sum_probs=214.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
+-|+++..||.|+||+||+|.++.++-..|.|+|.. .+.+..++++-|+.+|+.++||+||+++++|+.
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet--kseEELEDylVEIeILa~CdHP~ivkLl~ayy~--------- 100 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET--KSEEELEDYLVEIEILAECDHPVIVKLLSAYYF--------- 100 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc--cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhc---------
Confidence 468899999999999999999999999999999864 445667889999999999999999999988743
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFE-SYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~-~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+||..|||+| ....++- -...+++.++..+++|++.||.|||++
T Consensus 101 -------------------------------enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~ 149 (1187)
T KOG0579|consen 101 -------------------------------ENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ 149 (1187)
T ss_pred -------------------------------cCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhc
Confidence 4578999999986 4555444 456799999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC----CCCCCC
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKIDE 614 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~s~ 614 (1196)
+|||||||..|||++-+|.++|+|||.+....... -...++.|||+|||||++.. ...|+.
T Consensus 150 ~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~---------------qkRDsFIGTPYWMAPEVvmCET~KD~PYDy 214 (1187)
T KOG0579|consen 150 NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTR---------------QKRDSFIGTPYWMAPEVVMCETFKDQPYDY 214 (1187)
T ss_pred chhhhhccccceEEEecCcEeeecccccccchhHH---------------hhhccccCCcccccchheeeccccCCCchh
Confidence 99999999999999999999999999987543211 12356799999999998753 245999
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
++|||||||+|.||.. |.....++-+.+++....+...-.+...+..+.+++++||.+||..||++.++|+|||+.+
T Consensus 215 kaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~ 294 (1187)
T KOG0579|consen 215 KADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQN 294 (1187)
T ss_pred hhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCccccc
Confidence 9999999999999985 6777777777777766554432233445568999999999999999999999999999986
Q ss_pred ch
Q 000993 692 ME 693 (1196)
Q Consensus 692 ~~ 693 (1196)
..
T Consensus 295 ~~ 296 (1187)
T KOG0579|consen 295 AP 296 (1187)
T ss_pred CC
Confidence 54
|
|
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=361.60 Aligned_cols=261 Identities=28% Similarity=0.381 Sum_probs=205.7
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|.+.+.||+|+||.||+|.+..+++.||||++............+.+|+.+++.++||||++++++|....
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 89 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK----- 89 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccc-----
Confidence 458999999999999999999999999999999998765445455677889999999999999999998874321
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
.......+|++||||+++|.+.+.. .+++..++.++.||+.||+|||++
T Consensus 90 -----------------------------~~~~~~~~~lv~e~~~~~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~ 138 (355)
T cd07874 90 -----------------------------SLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 138 (355)
T ss_pred -----------------------------cccccceeEEEhhhhcccHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhC
Confidence 0012346899999999988887753 488999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++..... .......||+.|+|||++.+ ..++.++||
T Consensus 139 givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~----------------~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di 201 (355)
T cd07874 139 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS----------------FMMTPYVVTRYYRAPEVILG-MGYKENVDI 201 (355)
T ss_pred CcccCCCChHHEEECCCCCEEEeeCcccccCCCc----------------cccCCccccCCccCHHHHcC-CCCCchhhH
Confidence 9999999999999999999999999999754211 11234578999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhc----------------------CC-----CCC------------ccc
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK----------------------GE-----LPP------------SWV 656 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~----------------------~~-----~p~------------~~~ 656 (1196)
|||||++|+|++ ||............+... .. .+. ...
T Consensus 202 wslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (355)
T cd07874 202 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 281 (355)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhcccccccccccccc
Confidence 999999999996 776443222211111100 00 000 001
Q ss_pred cCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 657 AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 657 ~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
....++++||.+||+.||.+|||+.++|+|||+...
T Consensus 282 ~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~ 317 (355)
T cd07874 282 LKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW 317 (355)
T ss_pred ccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence 123467899999999999999999999999999744
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=357.67 Aligned_cols=252 Identities=27% Similarity=0.382 Sum_probs=207.0
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||.||+|+++.+++.||||+++.... .......+..|..++..+ +||||++++++|..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~------------- 67 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQT------------- 67 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-------------
Confidence 369999999999999999999999999875321 223345677889888866 89999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...+|+|||||+ ++|...+.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHr 120 (321)
T cd05591 68 ---------------------------KDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYR 120 (321)
T ss_pred ---------------------------CCeEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 356899999997 5999999888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dikp~Nill~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~ 184 (321)
T cd05591 121 DLKLDNILLDAEGHCKLADFGMCKEGILNG---------------VTTTTFCGTPDYIAPEILQE-LEYGPSVDWWALGV 184 (321)
T ss_pred CCCHHHeEECCCCCEEEeecccceecccCC---------------ccccccccCccccCHHHHcC-CCCCCccceechhH
Confidence 999999999999999999999987432111 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-------CHHHHHhccCCCCch
Q 000993 624 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-------SATELLQDALPPQME 693 (1196)
Q Consensus 624 iLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-------ta~eiL~~~~~~~~~ 693 (1196)
++|||++ ||...................|. ..++++.++|++||+.||.+|| ++.++++|+||....
T Consensus 185 il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~ 261 (321)
T cd05591 185 LMYEMMAGQPPFEADNEDDLFESILHDDVLYPV---WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEID 261 (321)
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCC
Confidence 9999996 88766665555444433322332 3457899999999999999999 999999999999887
Q ss_pred HHHH
Q 000993 694 YELL 697 (1196)
Q Consensus 694 ~~~~ 697 (1196)
+..+
T Consensus 262 ~~~~ 265 (321)
T cd05591 262 WVLL 265 (321)
T ss_pred HHHH
Confidence 7644
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=364.40 Aligned_cols=263 Identities=22% Similarity=0.386 Sum_probs=212.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.++|++.+.||+|+||.||+|+++.+++.||+|+++.... .......+.+|+.+++.++||||+++++++.
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~-------- 113 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQ-------- 113 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEe--------
Confidence 5799999999999999999999999999999999974321 2223345778999999999999999998773
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
+..++|+|||||+ |+|.+++.. ..+++..+..++.||+.||+|||+
T Consensus 114 --------------------------------~~~~~~lv~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~ 160 (370)
T cd05596 114 --------------------------------DDKYLYMVMEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHS 160 (370)
T ss_pred --------------------------------cCCEEEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 589988765 468999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC---CCCC
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP---KIDE 614 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~~s~ 614 (1196)
+||+||||||+|||++.++.+||+|||+++....... ......+||+.|+|||++.+.. .++.
T Consensus 161 ~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 226 (370)
T cd05596 161 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGM--------------VRCDTAVGTPDYISPEVLKSQGGDGYYGR 226 (370)
T ss_pred CCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCc--------------ccCCCCCCCcCeECHHHhccCCCCCCCCC
Confidence 9999999999999999999999999999975432110 1123457999999999987532 3789
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC-CCccccCCHHHHHHHHHcccCCCCC--CCCHHHHHhccC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQDAL 688 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~~l~~LI~~cL~~dP~~--RPta~eiL~~~~ 688 (1196)
++|||||||++|||++ ||...........+....... .+.....+.++.+||++||+.+|.+ ||+++++++|+|
T Consensus 227 ~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~ 306 (370)
T cd05596 227 ECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPF 306 (370)
T ss_pred ceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcc
Confidence 9999999999999996 887665554444443322221 1233346789999999999999988 999999999999
Q ss_pred CCCchHHHH
Q 000993 689 PPQMEYELL 697 (1196)
Q Consensus 689 ~~~~~~~~~ 697 (1196)
|.+..+...
T Consensus 307 ~~~~~~~~~ 315 (370)
T cd05596 307 FKNDQWTFD 315 (370)
T ss_pred cCCCChhhH
Confidence 998766533
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=356.98 Aligned_cols=259 Identities=27% Similarity=0.416 Sum_probs=206.6
Q ss_pred CceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCC--CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCcc
Q 000993 382 DFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~ 455 (1196)
+|++.+.||+|+||.||+|++. .+++.||+|++..... .....+.+.+|+.+++.+ +||||+++++++.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~----- 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQ----- 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEe-----
Confidence 5899999999999999999874 4789999999874321 222345688899999999 5999999998763
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+|+|||||+ ++|.+++.....+++..++.++.||+.||+|
T Consensus 76 -----------------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~ 120 (332)
T cd05614 76 -----------------------------------TEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEH 120 (332)
T ss_pred -----------------------------------cCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 2456899999997 5999999888889999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++.+||+|||+++...... .......+||+.|||||++.+...++.
T Consensus 121 lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~~ 186 (332)
T cd05614 121 LHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEE--------------KERTYSFCGTIEYMAPEIIRGKGGHGK 186 (332)
T ss_pred HHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccC--------------CCccccccCCccccCHHHhcCCCCCCC
Confidence 999999999999999999999999999999997542211 011234579999999999987555889
Q ss_pred cchhHHHHHHHHHhhc---CCchhH----HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHH
Q 000993 615 KADMYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATE 682 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~----~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~e 682 (1196)
++|||||||++|||++ ||.... ............ ++.....++.+.++|.+||+.||.+|| ++++
T Consensus 187 ~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~ 263 (332)
T cd05614 187 AVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCD---PPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASE 263 (332)
T ss_pred ccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCC---CCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHH
Confidence 9999999999999997 775321 112222222212 222234567899999999999999999 8899
Q ss_pred HHhccCCCCchHHHH
Q 000993 683 LLQDALPPQMEYELL 697 (1196)
Q Consensus 683 iL~~~~~~~~~~~~~ 697 (1196)
+++|+|+....+...
T Consensus 264 ~l~h~~~~~~~~~~~ 278 (332)
T cd05614 264 IKEHPFFKGLDWEAL 278 (332)
T ss_pred HHcCCCcCCCCHHHH
Confidence 999999998765543
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=360.45 Aligned_cols=252 Identities=27% Similarity=0.372 Sum_probs=206.1
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 465 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 465 (1196)
+.||+|+||.||+|+++.+|+.||+|+++.... .......+.+|+.+++.++||||++++++|..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~-------------- 66 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT-------------- 66 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEc--------------
Confidence 369999999999999999999999999975322 22334567889999999999999999987732
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh-CCCccc
Q 000993 466 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-QGIIHR 543 (1196)
Q Consensus 466 g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs-~gIiHr 543 (1196)
...+|+|||||+ ++|..++.....+++..++.++.||+.||+|||+ +||+||
T Consensus 67 --------------------------~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHr 120 (325)
T cd05594 67 --------------------------HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 120 (325)
T ss_pred --------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEec
Confidence 457899999997 5899988888889999999999999999999998 799999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (325)
T cd05594 121 DLKLENLMLDKDGHIKITDFGLCKEGIKDG---------------ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGV 184 (325)
T ss_pred CCCCCeEEECCCCCEEEecCCCCeecCCCC---------------cccccccCCcccCCHHHHcc-CCCCCccccccccc
Confidence 999999999999999999999987431110 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccCCCCchHH
Q 000993 624 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQMEYE 695 (1196)
Q Consensus 624 iLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~~~~~~~~ 695 (1196)
++|||++ ||..................+|. ..++++.+||++||+.||.+|+ ++.++++|+||.+..+.
T Consensus 185 il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~ 261 (325)
T cd05594 185 VMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR---TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQ 261 (325)
T ss_pred eeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCC---CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCHH
Confidence 9999997 77665554444333333333332 3567899999999999999997 99999999999987765
Q ss_pred HH
Q 000993 696 LL 697 (1196)
Q Consensus 696 ~~ 697 (1196)
..
T Consensus 262 ~~ 263 (325)
T cd05594 262 DV 263 (325)
T ss_pred HH
Confidence 33
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=361.74 Aligned_cols=260 Identities=28% Similarity=0.386 Sum_probs=206.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|.+.+.||+|+||.||+|.+..+++.||||++............+.+|+.+++.++||||+++++++....
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~----- 96 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK----- 96 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccc-----
Confidence 358999999999999999999999999999999998755444455667889999999999999999998763211
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
.......+|+||||++++|.+.+.. .+++..++.++.||+.||+|||++
T Consensus 97 -----------------------------~~~~~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~ 145 (364)
T cd07875 97 -----------------------------SLEEFQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 145 (364)
T ss_pred -----------------------------cccccCeEEEEEeCCCCCHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhC
Confidence 0112356899999999999888753 488899999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++..... .......||+.|+|||++.+ ..++.++||
T Consensus 146 ~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~----------------~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di 208 (364)
T cd07875 146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS----------------FMMTPYVVTRYYRAPEVILG-MGYKENVDI 208 (364)
T ss_pred CeecCCCCHHHEEECCCCcEEEEeCCCccccCCC----------------CcccCCcccCCcCCHHHHhC-CCCCchhhH
Confidence 9999999999999999999999999999754211 11234578999999999988 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC-------------------C--------------------Cccc
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-------------------P--------------------PSWV 656 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~-------------------p--------------------~~~~ 656 (1196)
|||||++|||++ ||............+...+.. | ....
T Consensus 209 wSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (364)
T cd07875 209 WSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNK 288 (364)
T ss_pred HhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccc
Confidence 999999999997 776544433322222110000 0 0000
Q ss_pred cCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 657 AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 657 ~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
.....+++||.+||+.||.+|||+.++|+|||+..
T Consensus 289 ~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~ 323 (364)
T cd07875 289 LKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323 (364)
T ss_pred cccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence 12346789999999999999999999999999864
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=340.63 Aligned_cols=288 Identities=25% Similarity=0.379 Sum_probs=237.7
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
..+++|+.+++||+|.||+|.+|+.+.+|+.||||++++.-. .......-+.|-++|...+||.+..+.-.|
T Consensus 165 vTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsF------- 237 (516)
T KOG0690|consen 165 VTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSF------- 237 (516)
T ss_pred eccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhh-------
Confidence 357899999999999999999999999999999999875432 223345567799999999999998776444
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
+....+|+||||+. |.|.-+|++...|+++.++.+-.+|++||.||
T Consensus 238 ---------------------------------Qt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YL 284 (516)
T KOG0690|consen 238 ---------------------------------QTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYL 284 (516)
T ss_pred ---------------------------------ccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhh
Confidence 34678999999996 58999998888999999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|+++||+||||.+|+|+|.+|++||+|||+++.-- . ....+.++||||.|+|||++.. ..|+.+
T Consensus 285 Hs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I----~-----------~g~t~kTFCGTPEYLAPEVleD-nDYgra 348 (516)
T KOG0690|consen 285 HSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI----K-----------YGDTTKTFCGTPEYLAPEVLED-NDYGRA 348 (516)
T ss_pred hhCCeeeeechhhhheeccCCceEeeecccchhcc----c-----------ccceeccccCChhhcCchhhcc-ccccce
Confidence 99999999999999999999999999999997421 0 1124577899999999999998 689999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhcc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDA 687 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~ 687 (1196)
+|+|.+||++|||++ ||+..+......-++.....+|. ..+++++.|+..+|.+||.+|. .+.+|.+|.
T Consensus 349 VDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr---~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~ 425 (516)
T KOG0690|consen 349 VDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPR---TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHR 425 (516)
T ss_pred eehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCc---cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhh
Confidence 999999999999997 99887776666555555555554 4567999999999999999997 489999999
Q ss_pred CCCCchHHHHHHHHHhcCCCCCCcchhhhccccccchhh
Q 000993 688 LPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETL 726 (1196)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~e~~~ 726 (1196)
||..+.|+.+ +...+.++.....-+......||++-.
T Consensus 426 FF~~v~W~~~--~~Kki~PPfKPqVtSetDTryFD~EFT 462 (516)
T KOG0690|consen 426 FFASVDWEAT--YRKKIEPPFKPQVTSETDTRYFDEEFT 462 (516)
T ss_pred hhccCCHHHH--HHhccCCCCCCCcccccchhhhhhhhh
Confidence 9999988744 445566655555555555556665543
|
|
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-37 Score=355.50 Aligned_cols=254 Identities=25% Similarity=0.379 Sum_probs=204.9
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHH---HhcCCCCeeeeeeeeeecCccccC
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATL---SRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL---~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
|++++.||+|+||.||+|.++.+|+.||||+++.... .....+.+.+|+.++ +.++||||+++++++..
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~------- 73 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQT------- 73 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEc-------
Confidence 6789999999999999999999999999999975431 222345566776655 56689999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+|||||++ +|...+.. ..+++..++.++.||+.||+|||+
T Consensus 74 ---------------------------------~~~~~lv~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~ 119 (324)
T cd05589 74 ---------------------------------EDHVCFVMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHE 119 (324)
T ss_pred ---------------------------------CCEEEEEEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4578999999975 78777654 579999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++.+||+|||+++...... ......+||+.|||||++.+ ..++.++|
T Consensus 120 ~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~g~~~y~aPE~~~~-~~~~~~~D 183 (324)
T cd05589 120 NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG---------------DRTSTFCGTPEFLAPEVLTE-TSYTRAVD 183 (324)
T ss_pred CCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC---------------CcccccccCccccCHhHhcC-CCCCcccc
Confidence 999999999999999999999999999986421110 11234679999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccCC
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALP 689 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~~ 689 (1196)
||||||++|||++ ||......+............|. ..++.+.++|++||+.||.+|| ++.++++|+||
T Consensus 184 iwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f 260 (324)
T cd05589 184 WWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPR---FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFF 260 (324)
T ss_pred hhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC---CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCc
Confidence 9999999999996 88766555544444433333333 3467899999999999999999 79999999999
Q ss_pred CCchHHH
Q 000993 690 PQMEYEL 696 (1196)
Q Consensus 690 ~~~~~~~ 696 (1196)
....+..
T Consensus 261 ~~~~~~~ 267 (324)
T cd05589 261 RDINWDD 267 (324)
T ss_pred CCCCHHH
Confidence 9876553
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=360.43 Aligned_cols=260 Identities=26% Similarity=0.405 Sum_probs=205.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|.+++.||+|+||.||+|.+..+++.||||++............+.+|+.+|+.++||||++++++|.....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----- 88 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATS----- 88 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccc-----
Confidence 368999999999999999999999999999999987544333445668899999999999999999987632210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
......+|++|++++++|.+++. ...+++..++.++.||+.||+|||++|
T Consensus 89 -----------------------------~~~~~~~~~~~~~~~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ 138 (343)
T cd07878 89 -----------------------------IENFNEVYLVTNLMGADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSAG 138 (343)
T ss_pred -----------------------------ccccCcEEEEeecCCCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 01234579999999999988775 456999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+|||++.++.+||+|||+++.... .....+||+.|+|||++.+...++.++|||
T Consensus 139 ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw 200 (343)
T cd07878 139 IIHRDLKPSNVAVNEDCELRILDFGLARQADD------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIW 200 (343)
T ss_pred eecccCChhhEEECCCCCEEEcCCccceecCC------------------CcCCccccccccCchHhcCCccCCchhhhH
Confidence 99999999999999999999999999975421 123457899999999998755689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcC-----------------------CCCC-----ccccCCHHHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKG-----------------------ELPP-----SWVAKFSEQESLLRR 668 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~-----------------------~~p~-----~~~~~~~~l~~LI~~ 668 (1196)
||||++|+|++ ||................+ ..+. .+....+.+.+||.+
T Consensus 201 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 280 (343)
T cd07878 201 SVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEK 280 (343)
T ss_pred hHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHH
Confidence 99999999996 6754332222211111000 0110 112334567899999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCc
Q 000993 669 LMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||..||.+|||+.++++|+||.+.
T Consensus 281 mL~~dp~~R~s~~ell~hp~~~~~ 304 (343)
T cd07878 281 MLVLDSDKRISASEALAHPYFSQY 304 (343)
T ss_pred HcCCChhhCCCHHHHhcCcchhcc
Confidence 999999999999999999999764
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-38 Score=347.00 Aligned_cols=255 Identities=28% Similarity=0.419 Sum_probs=204.2
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
.|+..+++|.|+||.||+|....+++.||||+.-.... --.+|+++|+.++|||||++..+|..+..
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r------~knrEl~im~~l~HpNIV~L~~~f~~~~~------- 91 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR------YKNRELQIMRKLDHPNIVRLLYFFSSSTE------- 91 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC------cCcHHHHHHHhcCCcCeeeEEEEEEecCC-------
Confidence 57788999999999999999999999999998753221 23479999999999999999988854310
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES----YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~----~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
.+..++.+||||+|.+|.++++. ..+++.-.++-+..||++||+|||+
T Consensus 92 ----------------------------~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~ 143 (364)
T KOG0658|consen 92 ----------------------------SDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS 143 (364)
T ss_pred ----------------------------CchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh
Confidence 12457789999999999999975 4678888999999999999999999
Q ss_pred CCCcccCCCcCcEEecCC-CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 538 QGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
.||+||||||+|+|+|.+ |.+||||||.|+.+..++ ...++.-|..|.|||.+.|...|+.+.
T Consensus 144 ~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e----------------pniSYicSRyYRaPELifga~~Yt~~I 207 (364)
T KOG0658|consen 144 HGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE----------------PNISYICSRYYRAPELIFGATEYTTSI 207 (364)
T ss_pred cCcccCCCChheEEEcCCCCeEEeccCCcceeeccCC----------------CceeEEEeccccCHHHHcCccccCcee
Confidence 999999999999999987 899999999999875433 124567899999999999988999999
Q ss_pred hhHHHHHHHHHhhc--C-CchhHHHHHHHHHhhh------------c-----CCCC----C-----ccccCCHHHHHHHH
Q 000993 617 DMYSLGIVFFELWH--P-FSTAMERQIVLSDLKQ------------K-----GELP----P-----SWVAKFSEQESLLR 667 (1196)
Q Consensus 617 DVwSlGviLyELlt--P-f~~~~~~~~~~~~l~~------------~-----~~~p----~-----~~~~~~~~l~~LI~ 667 (1196)
||||.||++.||+. | |.+.+.......++.. + ...| . ......+++.+|+.
T Consensus 208 DiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~ 287 (364)
T KOG0658|consen 208 DIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLS 287 (364)
T ss_pred EEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHH
Confidence 99999999999995 4 3333332222211110 0 0111 1 11234578999999
Q ss_pred HcccCCCCCCCCHHHHHhccCCCCch
Q 000993 668 RLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
++|..+|.+|.++.++++|+||....
T Consensus 288 ~~L~Y~P~~R~~~~~~l~h~fFdelr 313 (364)
T KOG0658|consen 288 KLLQYSPSKRLSALEALAHPFFDELR 313 (364)
T ss_pred HHhccChhhcCCHHHHhcchhhHHhh
Confidence 99999999999999999999987653
|
|
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=355.68 Aligned_cols=250 Identities=29% Similarity=0.450 Sum_probs=204.6
Q ss_pred eeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCC--CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 387 QPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+.||+|+||.||+|++. .+++.||||+++.... .......+.+|+.+|+.++||||++++++|..
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~---------- 71 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQT---------- 71 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEec----------
Confidence 67999999999999874 4688999999875321 22234567889999999999999999988732
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
...+|+||||++ ++|.+++...+.+.+..++.++.||+.||+|||++||
T Consensus 72 ------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 121 (323)
T cd05584 72 ------------------------------GGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGI 121 (323)
T ss_pred ------------------------------CCeEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346899999997 4999999888889999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++||||
T Consensus 122 vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Diws 185 (323)
T cd05584 122 IYRDLKPENILLDAQGHVKLTDFGLCKESIHEG---------------TVTHTFCGTIEYMAPEILMR-SGHGKAVDWWS 185 (323)
T ss_pred ecCCCCHHHeEECCCCCEEEeeCcCCeecccCC---------------CcccccCCCccccChhhccC-CCCCCcceecc
Confidence 999999999999999999999999987432110 01233579999999999987 56899999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccCCCCc
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQM 692 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~~~~~ 692 (1196)
|||++|||++ ||..................+|+ ..++.+.+||++||+.||.+|| ++.++++|+||...
T Consensus 186 lG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 186 LGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPP---YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred cHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 9999999997 78766555544444443333333 3467899999999999999999 89999999999887
Q ss_pred hHH
Q 000993 693 EYE 695 (1196)
Q Consensus 693 ~~~ 695 (1196)
.+.
T Consensus 263 ~~~ 265 (323)
T cd05584 263 NWD 265 (323)
T ss_pred CHH
Confidence 654
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-37 Score=362.23 Aligned_cols=261 Identities=24% Similarity=0.401 Sum_probs=209.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.++|++.+.||+|+||.||+|+++.+++.||+|++..... .......+.+|+.+++.++||||++++++|.
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~-------- 113 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQ-------- 113 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE--------
Confidence 3789999999999999999999999999999999864322 2223456788999999999999999998873
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...++|+|||||+ |+|.+++... .+++..+..++.||+.||+|||+
T Consensus 114 --------------------------------~~~~~~lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~ 160 (370)
T cd05621 114 --------------------------------DDKYLYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHS 160 (370)
T ss_pred --------------------------------cCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 5899988654 68999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC---CCCC
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP---KIDE 614 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~~s~ 614 (1196)
+||+||||||+|||++.++.+||+|||+|+...... .......+||+.|||||++.+.+ .++.
T Consensus 161 ~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~--------------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~ 226 (370)
T cd05621 161 MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG--------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGR 226 (370)
T ss_pred CCeEecCCCHHHEEECCCCCEEEEecccceecccCC--------------ceecccCCCCcccCCHHHHhccCCCCCCCc
Confidence 999999999999999999999999999997643211 01123457999999999987632 3789
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC-CCccccCCHHHHHHHHHcccCCCCC--CCCHHHHHhccC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQDAL 688 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~~l~~LI~~cL~~dP~~--RPta~eiL~~~~ 688 (1196)
++|||||||+||||++ ||...........+....... .+.....+..++++|.+||..+|.+ |+++.++++|||
T Consensus 227 ~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~ 306 (370)
T cd05621 227 ECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPF 306 (370)
T ss_pred ccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcc
Confidence 9999999999999996 887666555444444322222 1223345778999999999866644 899999999999
Q ss_pred CCCchHH
Q 000993 689 PPQMEYE 695 (1196)
Q Consensus 689 ~~~~~~~ 695 (1196)
|....+.
T Consensus 307 ~~~~~~~ 313 (370)
T cd05621 307 FKNDQWN 313 (370)
T ss_pred cCCCCcC
Confidence 9886543
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-37 Score=354.52 Aligned_cols=252 Identities=27% Similarity=0.374 Sum_probs=203.6
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||.||+|+++.+|+.||+|+++.... .......+..|..++..+ +||||++++++|.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-------------- 66 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQ-------------- 66 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEE--------------
Confidence 469999999999999999999999999975321 112344567788888754 8999999998873
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...++|+|||||+ ++|.+++.....+++.++..++.||+.||+|||++||+||
T Consensus 67 --------------------------~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHr 120 (316)
T cd05620 67 --------------------------TKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYR 120 (316)
T ss_pred --------------------------eCCEEEEEECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 2457899999997 5999999888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGv 184 (316)
T cd05620 121 DLKLDNVMLDRDGHIKIADFGMCKENVFGD---------------NRASTFCGTPDYIAPEILQG-LKYTFSVDWWSFGV 184 (316)
T ss_pred CCCHHHeEECCCCCEEeCccCCCeecccCC---------------CceeccCCCcCccCHHHHcC-CCCCcccchhhhHH
Confidence 999999999999999999999986421100 11234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH-HHHHhccCCCCchHHHH
Q 000993 624 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-TELLQDALPPQMEYELL 697 (1196)
Q Consensus 624 iLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta-~eiL~~~~~~~~~~~~~ 697 (1196)
++|||++ ||......+............| ...++++++||++||+.||.+||++ +++++|+||....+...
T Consensus 185 il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~~~~~ 259 (316)
T cd05620 185 LLYEMLIGQSPFHGDDEDELFESIRVDTPHYP---RWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTINWTAL 259 (316)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC---CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCCHHHH
Confidence 9999996 8876655544433332222222 2356789999999999999999997 58889999999876644
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-37 Score=354.21 Aligned_cols=253 Identities=27% Similarity=0.419 Sum_probs=202.9
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||.||+|++..+++.||||+++.... .......+..|..++..+ +||||+++++++.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~-------------- 66 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQ-------------- 66 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEE--------------
Confidence 369999999999999999999999999975321 112334556677777654 8999999998762
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
....+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++||+||
T Consensus 67 --------------------------~~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~ 120 (316)
T cd05592 67 --------------------------TKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYR 120 (316)
T ss_pred --------------------------cCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeC
Confidence 2457899999996 5999999888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~ 184 (316)
T cd05592 121 DLKLDNVLLDKDGHIKIADFGMCKENMNGE---------------GKASTFCGTPDYIAPEILKG-QKYNESVDWWSFGV 184 (316)
T ss_pred CCCHHHeEECCCCCEEEccCcCCeECCCCC---------------CccccccCCccccCHHHHcC-CCCCCcccchhHHH
Confidence 999999999999999999999997532111 11234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH-HHHHhccCCCCchHHHHH
Q 000993 624 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-TELLQDALPPQMEYELLD 698 (1196)
Q Consensus 624 iLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta-~eiL~~~~~~~~~~~~~~ 698 (1196)
++|||++ ||......+...........+| ...+.++.+||++||+.||.+||++ .++++|+|+....+..+.
T Consensus 185 il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~~~~~~~ 260 (316)
T cd05592 185 LLYEMLIGQSPFHGEDEDELFDSILNDRPHFP---RWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGIDWERLE 260 (316)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCCCHHHHH
Confidence 9999996 8876655554444333222222 3356689999999999999999986 588899999988766443
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=349.85 Aligned_cols=258 Identities=25% Similarity=0.397 Sum_probs=222.8
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
++...=|.+.+.||+|.|..|.+|+|..+|..||||+|.+...+.-...++.+|+..|+.++|||||++|.+.
T Consensus 14 gkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEVi------- 86 (864)
T KOG4717|consen 14 GKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVI------- 86 (864)
T ss_pred cceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehh-------
Confidence 4445668888999999999999999999999999999987766655567899999999999999999999774
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~y 534 (1196)
.....+|+|+|+-+ |+|+++|.+. ..+.++.+.+|+.||+.|+.|
T Consensus 87 ---------------------------------DTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~Y 133 (864)
T KOG4717|consen 87 ---------------------------------DTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISY 133 (864)
T ss_pred ---------------------------------cccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHH
Confidence 13567999999986 5999999765 469999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecC-CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
+|+.++|||||||+|+.+.+ -|-|||.|||++..+.... ..++.||+.+|.|||+|.|..+-.
T Consensus 134 CHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~----------------kL~TsCGSLAYSAPEILLGDsYDA 197 (864)
T KOG4717|consen 134 CHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK----------------KLTTSCGSLAYSAPEILLGDSYDA 197 (864)
T ss_pred HhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcc----------------hhhcccchhhccCchhhhcCccCC
Confidence 99999999999999998765 4899999999997654332 235679999999999999965556
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
+++||||||||||-|.+ ||....+.+..-.++..+...|.. .+.++++||..||..||.+|.+.++|..++|.+
T Consensus 198 PAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPsh---vS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq 274 (864)
T KOG4717|consen 198 PAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSH---VSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQ 274 (864)
T ss_pred cchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchh---hhHHHHHHHHHHHhcCchhhccHHHHhcccccc
Confidence 89999999999999986 999888888777777766666654 455999999999999999999999999999998
Q ss_pred Cch
Q 000993 691 QME 693 (1196)
Q Consensus 691 ~~~ 693 (1196)
...
T Consensus 275 ~~D 277 (864)
T KOG4717|consen 275 AGD 277 (864)
T ss_pred CCC
Confidence 764
|
|
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-37 Score=355.54 Aligned_cols=252 Identities=23% Similarity=0.369 Sum_probs=202.4
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||.||+|+++.+++.||||+++.... .......+.+|..+++.+ +||||++++++|..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~------------- 67 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQT------------- 67 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEc-------------
Confidence 368999999999999999999999999975432 223345678899999988 79999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~ 120 (329)
T cd05588 68 ---------------------------ESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYR 120 (329)
T ss_pred ---------------------------CCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 457899999997 5899998888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (329)
T cd05588 121 DLKLDNVLLDAEGHIKLTDYGMCKEGIRPG---------------DTTSTFCGTPNYIAPEILRG-EDYGFSVDWWALGV 184 (329)
T ss_pred CCCHHHeEECCCCCEEECcCccccccccCC---------------CccccccCCccccCHHHHcC-CCCCCccceechHH
Confidence 999999999999999999999986421110 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchh--------HHHHHHHHHhh-hcCCCCCccccCCHHHHHHHHHcccCCCCCCCC------HHHHHh
Q 000993 624 VFFELWH---PFSTA--------MERQIVLSDLK-QKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS------ATELLQ 685 (1196)
Q Consensus 624 iLyELlt---Pf~~~--------~~~~~~~~~l~-~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt------a~eiL~ 685 (1196)
++|||++ ||... .........+. ....+| ...++++.++|++||+.||.+||+ +.++++
T Consensus 185 ~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 185 LMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIP---RSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred HHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCC---CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 9999996 77421 11111122222 122223 235678999999999999999987 799999
Q ss_pred ccCCCCchHHHH
Q 000993 686 DALPPQMEYELL 697 (1196)
Q Consensus 686 ~~~~~~~~~~~~ 697 (1196)
|+||....+...
T Consensus 262 hp~~~~~~~~~~ 273 (329)
T cd05588 262 HPFFRNIDWDLL 273 (329)
T ss_pred CCCCCCCCHHHH
Confidence 999988876644
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=357.43 Aligned_cols=251 Identities=27% Similarity=0.425 Sum_probs=206.4
Q ss_pred eeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcC
Q 000993 387 QPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 463 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~ 463 (1196)
+.||+|+||.||++++. .+|+.||+|++............+.+|+.+|++++||||++++++|..
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------------ 69 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQT------------ 69 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEc------------
Confidence 57999999999999873 578999999997543333344567889999999999999999988732
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcc
Q 000993 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 542 (1196)
Q Consensus 464 ~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiH 542 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++||+|
T Consensus 70 ----------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H 121 (318)
T cd05582 70 ----------------------------EGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIY 121 (318)
T ss_pred ----------------------------CCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence 456899999996 699999988888999999999999999999999999999
Q ss_pred cCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHH
Q 000993 543 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622 (1196)
Q Consensus 543 rDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlG 622 (1196)
|||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+ ..++.++||||||
T Consensus 122 ~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG 185 (318)
T cd05582 122 RDLKPENILLDEEGHIKLTDFGLSKESIDHE---------------KKAYSFCGTVEYMAPEVVNR-RGHTQSADWWSFG 185 (318)
T ss_pred CCCCHHHeEECCCCcEEEeeccCCcccCCCC---------------CceecccCChhhcCHHHHcC-CCCCCccceeccc
Confidence 9999999999999999999999987532110 11234579999999999987 5689999999999
Q ss_pred HHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhccCCCCchH
Q 000993 623 IVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPPQMEY 694 (1196)
Q Consensus 623 viLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~~~~~~~~~ 694 (1196)
|++|||++ ||..................+|. ..++.+.+||++||+.||.+||+ +.++++|+||....+
T Consensus 186 ~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~ 262 (318)
T cd05582 186 VLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQ---FLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDW 262 (318)
T ss_pred eEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCH
Confidence 99999997 88766555544444433333333 34678999999999999999999 788999999998865
Q ss_pred HH
Q 000993 695 EL 696 (1196)
Q Consensus 695 ~~ 696 (1196)
..
T Consensus 263 ~~ 264 (318)
T cd05582 263 NK 264 (318)
T ss_pred HH
Confidence 53
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=359.84 Aligned_cols=238 Identities=27% Similarity=0.403 Sum_probs=198.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
+....++-||.|+-|.||+|+.+ ++.||||+++- .-..+++-|+.|+||||+.+.|+|.
T Consensus 124 e~IsELeWlGSGaQGAVF~Grl~--netVAVKKV~e---------lkETdIKHLRkLkH~NII~FkGVCt---------- 182 (904)
T KOG4721|consen 124 EEISELEWLGSGAQGAVFLGRLH--NETVAVKKVRE---------LKETDIKHLRKLKHPNIITFKGVCT---------- 182 (904)
T ss_pred HHhhhhhhhccCcccceeeeecc--CceehhHHHhh---------hhhhhHHHHHhccCcceeeEeeeec----------
Confidence 44455678999999999999987 89999997642 1123688899999999999999993
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
..+.++||||||. |-|..+|+....++......|..+||.||.|||.+.
T Consensus 183 ------------------------------qsPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hK 232 (904)
T KOG4721|consen 183 ------------------------------QSPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHK 232 (904)
T ss_pred ------------------------------CCceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhh
Confidence 2567899999997 799999999999999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|||||||+-||||..+..|||+|||.++...... +..+++||..|||||++.+ ...+.|+|||
T Consensus 233 IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S----------------TkMSFaGTVaWMAPEvIrn-ePcsEKVDIw 295 (904)
T KOG4721|consen 233 IIHRDLKSPNILISYDDVVKISDFGTSKELSDKS----------------TKMSFAGTVAWMAPEVIRN-EPCSEKVDIW 295 (904)
T ss_pred HhhhccCCCceEeeccceEEeccccchHhhhhhh----------------hhhhhhhhHhhhCHHHhhc-CCccccccee
Confidence 9999999999999999999999999998654221 2356899999999999998 5689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
||||+||||+| ||.+-....+....-. +....+-+..++..++-||+.||+..|..||++.+||.|-
T Consensus 296 SfGVVLWEmLT~EiPYkdVdssAIIwGVGs-NsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 296 SFGVVLWEMLTGEIPYKDVDSSAIIWGVGS-NSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL 365 (904)
T ss_pred hhHHHHHHHHhcCCCccccchheeEEeccC-CcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence 99999999997 8877665544332211 1112233345566888999999999999999999999983
|
|
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=353.24 Aligned_cols=264 Identities=24% Similarity=0.417 Sum_probs=211.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++++.||+|+||.||+++++.+++.||||++..... .......+.+|+.+++.++||||++++++|.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------- 71 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQ--------- 71 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEe---------
Confidence 479999999999999999999999999999999974321 2223456888999999999999999998873
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...++|+||||++ ++|.+++.+ ...+++..++.++.||+.||+|||+
T Consensus 72 -------------------------------~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 120 (331)
T cd05597 72 -------------------------------DENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQ 120 (331)
T ss_pred -------------------------------cCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2457899999996 599999976 4579999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC----CCCCC
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKID 613 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~s 613 (1196)
+||+||||||+|||++.++.+||+|||++..+..... ......+||+.|||||++.+ ...++
T Consensus 121 ~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 186 (331)
T cd05597 121 LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT--------------VQSNVAVGTPDYISPEILQAMEDGKGRYG 186 (331)
T ss_pred CCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC--------------ccccceeccccccCHHHHhhccccccCCC
Confidence 9999999999999999999999999999875432110 01123469999999999873 24578
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHcccCCCCC--CCCHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~~~l~~LI~~cL~~dP~~--RPta~eiL~~ 686 (1196)
.++|||||||++|||++ ||......+....+.... ..+++.....+..++++|++||+.++.+ ||++.++++|
T Consensus 187 ~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 187 PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 89999999999999996 887655544444333322 2344444556789999999988765443 8899999999
Q ss_pred cCCCCchHHHHH
Q 000993 687 ALPPQMEYELLD 698 (1196)
Q Consensus 687 ~~~~~~~~~~~~ 698 (1196)
+||....+....
T Consensus 267 p~~~~~~~~~~~ 278 (331)
T cd05597 267 PFFEGIDWDNIR 278 (331)
T ss_pred CCCCCCCHHHHh
Confidence 999988766543
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-37 Score=355.71 Aligned_cols=250 Identities=22% Similarity=0.329 Sum_probs=195.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~ 454 (1196)
++|++.+.||+|+||.||+|.+. .+++.||||+++.. ........+.+|+.+|+.+ +||||++++++|...
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-- 83 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEG-ATASEHKALMSELKILIHIGNHLNVVNLLGACTKP-- 83 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccc-cchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC--
Confidence 68999999999999999999863 34578999998643 2333456789999999999 899999999887321
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--------------------
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------------------- 513 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------------------- 513 (1196)
...+|++||||+ |+|.+++...
T Consensus 84 -------------------------------------~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 126 (338)
T cd05102 84 -------------------------------------NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRA 126 (338)
T ss_pred -------------------------------------CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhh
Confidence 235799999997 5999888642
Q ss_pred ------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEE
Q 000993 514 ------------------------------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 551 (1196)
Q Consensus 514 ------------------------------------------~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NIL 551 (1196)
.++++..+..++.||+.||+|||++||+||||||+|||
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil 206 (338)
T cd05102 127 MVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNIL 206 (338)
T ss_pred hhhhhccccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEE
Confidence 23777888999999999999999999999999999999
Q ss_pred ecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc-
Q 000993 552 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH- 630 (1196)
Q Consensus 552 ld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt- 630 (1196)
++.++.+||+|||+++.+..... ........+++.|+|||++.+ ..++.++|||||||+||||++
T Consensus 207 ~~~~~~~kl~DfG~a~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDiwslG~il~el~~~ 272 (338)
T cd05102 207 LSENNVVKICDFGLARDIYKDPD-------------YVRKGSARLPLKWMAPESIFD-KVYTTQSDVWSFGVLLWEIFSL 272 (338)
T ss_pred EcCCCcEEEeecccccccccCcc-------------hhcccCCCCCccccCcHHhhc-CCCCcccCHHHHHHHHHHHHhC
Confidence 99999999999999986422110 011123356789999999987 568999999999999999984
Q ss_pred ---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 631 ---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 631 ---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
||......+.....+. .+..+......++.+.+||.+||+.||.+|||+.++++
T Consensus 273 g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 273 GASPYPGVQINEEFCQRLK-DGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred CCCCCCCCCccHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 7765443333333322 22223233456678999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-37 Score=353.33 Aligned_cols=252 Identities=27% Similarity=0.403 Sum_probs=206.1
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||+||+|+++.+++.||||+++.... .......+.+|..+++.+ +||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~------------- 67 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQT------------- 67 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-------------
Confidence 369999999999999999999999999975321 223345677899999888 79999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...+|+|||||+ ++|.+.+.....+++.++..++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~ 120 (318)
T cd05570 68 ---------------------------KDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYR 120 (318)
T ss_pred ---------------------------CCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEcc
Confidence 456899999996 5899999888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslGv 184 (318)
T cd05570 121 DLKLDNVLLDSEGHIKIADFGMCKEGILGG---------------VTTSTFCGTPDYIAPEILSY-QPYGPAVDWWALGV 184 (318)
T ss_pred CCCHHHeEECCCCcEEecccCCCeecCcCC---------------CcccceecCccccCHHHhcC-CCCCcchhhhhHHH
Confidence 999999999999999999999986421110 01233579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH-----HHHHhccCCCCchHH
Q 000993 624 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-----TELLQDALPPQMEYE 695 (1196)
Q Consensus 624 iLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta-----~eiL~~~~~~~~~~~ 695 (1196)
++|+|++ ||...................| ...+..+.+||++||..||.+||++ .++++|+|+....+.
T Consensus 185 il~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~~ 261 (318)
T cd05570 185 LLYEMLAGQSPFEGDDEDELFQSILEDEVRYP---RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDWD 261 (318)
T ss_pred HHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC---CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCHH
Confidence 9999996 8876555544444333333333 2356789999999999999999999 999999999988765
Q ss_pred HH
Q 000993 696 LL 697 (1196)
Q Consensus 696 ~~ 697 (1196)
..
T Consensus 262 ~~ 263 (318)
T cd05570 262 KL 263 (318)
T ss_pred HH
Confidence 43
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-37 Score=352.46 Aligned_cols=258 Identities=26% Similarity=0.398 Sum_probs=210.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCccccCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+|+..+.||+|+||.||+|+++.+|+.||||+++.... .......+..|..+++.+. ||+|+++++++.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~--------- 71 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQ--------- 71 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEe---------
Confidence 47889999999999999999999999999999875321 2223456778999998885 567777887762
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....+|+|||||+ ++|.+++.....+++.+++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~ 120 (323)
T cd05615 72 -------------------------------TVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRR 120 (323)
T ss_pred -------------------------------cCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999996 59999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++||
T Consensus 121 ~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di 184 (323)
T cd05615 121 GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG---------------VTTRTFCGTPDYIAPEIIAY-QPYGKSVDW 184 (323)
T ss_pred CeeccCCCHHHeEECCCCCEEEeccccccccCCCC---------------ccccCccCCccccCHHHHcC-CCCCCccch
Confidence 99999999999999999999999999987432111 01234579999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhccCCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPP 690 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~~~~~ 690 (1196)
|||||++|||++ ||...................|. ..++++.+++.+||+.||.+|++ ..++++|+||.
T Consensus 185 wslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~ 261 (323)
T cd05615 185 WAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK---SLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFR 261 (323)
T ss_pred hhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc---cCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccC
Confidence 999999999997 88776665555554443333333 34678999999999999999997 57999999999
Q ss_pred CchHHHHH
Q 000993 691 QMEYELLD 698 (1196)
Q Consensus 691 ~~~~~~~~ 698 (1196)
...+..+.
T Consensus 262 ~~~~~~~~ 269 (323)
T cd05615 262 RIDWDKLE 269 (323)
T ss_pred CCCHHHHh
Confidence 98776554
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-37 Score=371.13 Aligned_cols=252 Identities=21% Similarity=0.284 Sum_probs=196.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCC------CeeeeeeeeeecC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ------HVVRYYQAWFETG 453 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~Hp------nIV~l~~~~~e~~ 453 (1196)
.++|+++++||+|+||+||+|.+..+++.||||+++... .....+..|+.+++.++|. +|++++++|..
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~-- 202 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN-- 202 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc--
Confidence 368999999999999999999999999999999986422 2234456677777777554 57777766521
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
...++|+||++++++|.+++.+.+.+++..++.++.||+.||+
T Consensus 203 -------------------------------------~~~~~~iv~~~~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~ 245 (467)
T PTZ00284 203 -------------------------------------ETGHMCIVMPKYGPCLLDWIMKHGPFSHRHLAQIIFQTGVALD 245 (467)
T ss_pred -------------------------------------CCceEEEEEeccCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 1346899999999999999988888999999999999999999
Q ss_pred HHHh-CCCcccCCCcCcEEecCCC----------------CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccc
Q 000993 534 HIHG-QGIIHRDLTPNNIFFDARN----------------DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 596 (1196)
Q Consensus 534 yLHs-~gIiHrDLKp~NILld~~~----------------~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 596 (1196)
|||+ .|||||||||+|||++.++ .+||+|||.+.... ...+..+|
T Consensus 246 yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~------------------~~~~~~~g 307 (467)
T PTZ00284 246 YFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDER------------------HSRTAIVS 307 (467)
T ss_pred HHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCc------------------cccccccC
Confidence 9998 5999999999999998765 49999999875321 11234689
Q ss_pred cccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccc-----------------
Q 000993 597 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWV----------------- 656 (1196)
Q Consensus 597 T~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~----------------- 656 (1196)
|+.|+|||++.+ ..|+.++|||||||++|||++ ||......+.........+.+|..|.
T Consensus 308 t~~Y~APE~~~~-~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 386 (467)
T PTZ00284 308 TRHYRSPEVVLG-LGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQ 386 (467)
T ss_pred CccccCcHHhhc-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhccc
Confidence 999999999988 579999999999999999997 77654443322211111111111110
Q ss_pred ----------------------cCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 657 ----------------------AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 657 ----------------------~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
...+.+.+||.+||+.||.+|||++++|+||||.+.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~ 444 (467)
T PTZ00284 387 LRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKY 444 (467)
T ss_pred ccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCcccccc
Confidence 012356799999999999999999999999999864
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=334.03 Aligned_cols=340 Identities=19% Similarity=0.248 Sum_probs=286.2
Q ss_pred chhhccCCCC---CCCCccccccccccccccCCcccchhhhhHHHHHHHHHHhhcccCCCc--ccHHHHHHHHHhcCCCC
Q 000993 252 SLLQDHGSNN---DGGDTEIDRLESFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLT--DALPQIATELYNLGIFS 326 (1196)
Q Consensus 252 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~lc~~~~~~~--~~~~~~~~~l~~l~~~~ 326 (1196)
++++...+.| .-|.+|+-- +-| -|+ ..|+|||+..++++++||++|.+| ++.+.+.+.|.+++...
T Consensus 85 kll~~kadvnavnehgntplhy-acf----wgy----dqiaedli~~ga~v~icnk~g~tpldkakp~l~~~l~e~aek~ 155 (448)
T KOG0195|consen 85 KLLSRKADVNAVNEHGNTPLHY-ACF----WGY----DQIAEDLISCGAAVNICNKKGMTPLDKAKPMLKNTLLEIAEKH 155 (448)
T ss_pred HHHHHhcccchhhccCCCchhh-hhh----hcH----HHHHHHHHhccceeeecccCCCCchhhhchHHHHHHHHHHHHh
Confidence 4555555544 566677211 111 233 368999999999999999999999 44588888999999888
Q ss_pred ccc-cCcCCCCcccccchhhHHHhhhhccccccCCcCCCCCCCCCCCCCCCCcccCCceEEeeeccCCcEEEEEEEEccC
Q 000993 327 ERG-RDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLD 405 (1196)
Q Consensus 327 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~ 405 (1196)
++. ++++++++.|.+ .++++++.+++..++..+.++.++.+|.+...|+.|+|+|+
T Consensus 156 gq~~nripfkdt~wkg---------------------tktr~rdatlsr~~gid~~~lnl~tkl~e~hsgelwrgrwq-- 212 (448)
T KOG0195|consen 156 GQSPNRIPFKDTTWKG---------------------TKTRTRDATLSRYTGIDVSSLNLITKLAESHSGELWRGRWQ-- 212 (448)
T ss_pred CCCCCccccccccccc---------------------ccccccccccccccCcchhhhhhhhhhccCCCccccccccc--
Confidence 888 789999998887 56677888889999999999999999999999999999998
Q ss_pred CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCCccccccccccccccccccc
Q 000993 406 GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTG 485 (1196)
Q Consensus 406 g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~ 485 (1196)
|..+++|+++....+.+..++|..|...|+.+.||||++++++|
T Consensus 213 gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgac------------------------------------ 256 (448)
T KOG0195|consen 213 GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGAC------------------------------------ 256 (448)
T ss_pred CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhc------------------------------------
Confidence 78899999999999888899999999999999999999999998
Q ss_pred ccccccccEEEEEeeecC-CCHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHHhCC--CcccCCCcCcEEecCCCCeEE
Q 000993 486 QENKLESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQG--IIHRDLTPNNIFFDARNDIKI 560 (1196)
Q Consensus 486 ~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~--l~e~~~~~i~~qIa~gL~yLHs~g--IiHrDLKp~NILld~~~~vKL 560 (1196)
+.++++.++.+||+ |+|+.+++.... ++..++.+++.+|++||+|||+.. |....|++..++||++.+++|
T Consensus 257 ----nsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltari 332 (448)
T KOG0195|consen 257 ----NSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARI 332 (448)
T ss_pred ----cCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhe
Confidence 34678899999998 799999987654 788999999999999999999985 666789999999999998887
Q ss_pred eccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC--CCCcchhHHHHHHHHHhhc---CCchh
Q 000993 561 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK--IDEKADMYSLGIVFFELWH---PFSTA 635 (1196)
Q Consensus 561 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~--~s~ksDVwSlGviLyELlt---Pf~~~ 635 (1196)
+ +...+++++..+....|.||+||.++..+. .-.++|||||+|+||||.| ||.+.
T Consensus 333 s--------------------mad~kfsfqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadl 392 (448)
T KOG0195|consen 333 S--------------------MADTKFSFQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADL 392 (448)
T ss_pred e--------------------cccceeeeeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccC
Confidence 5 112234556677788999999999998554 4578999999999999997 99999
Q ss_pred HHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHH
Q 000993 636 MERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 684 (1196)
Q Consensus 636 ~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL 684 (1196)
.+++..+++.. .+..+..++..++.+.+|+.-|++.||.+||.++.|+
T Consensus 393 spmecgmkial-eglrv~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 393 SPMECGMKIAL-EGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred Cchhhhhhhhh-ccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 99999998877 4444555566778999999999999999999998876
|
|
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-37 Score=354.07 Aligned_cols=253 Identities=23% Similarity=0.376 Sum_probs=202.4
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||+||+|+++.+++.||+|+++.... .......+.+|+.++..+ +||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~------------- 67 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT------------- 67 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEe-------------
Confidence 369999999999999999999999999975432 223445677899888877 89999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...+|+|||||+ ++|..++.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~ 120 (329)
T cd05618 68 ---------------------------ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 120 (329)
T ss_pred ---------------------------CCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeC
Confidence 457899999997 5898888888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dikp~Nili~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (329)
T cd05618 121 DLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------DTTSTFCGTPNYIAPEILRG-EDYGFSVDWWALGV 184 (329)
T ss_pred CCCHHHEEECCCCCEEEeeCCccccccCCC---------------CccccccCCccccCHHHHcC-CCCCCccceecccH
Confidence 999999999999999999999987431110 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchh--------HHHHHHHHH-hhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC------HHHHHh
Q 000993 624 VFFELWH---PFSTA--------MERQIVLSD-LKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS------ATELLQ 685 (1196)
Q Consensus 624 iLyELlt---Pf~~~--------~~~~~~~~~-l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt------a~eiL~ 685 (1196)
++|||++ ||... ......... ......+| ...+..+.+||++||+.||.+||+ +.++++
T Consensus 185 il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p---~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05618 185 LMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP---RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 261 (329)
T ss_pred HHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCC---CCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhc
Confidence 9999997 77421 111111222 22222233 245678999999999999999998 589999
Q ss_pred ccCCCCchHHHHH
Q 000993 686 DALPPQMEYELLD 698 (1196)
Q Consensus 686 ~~~~~~~~~~~~~ 698 (1196)
|+||.+..+....
T Consensus 262 hp~f~~~~~~~~~ 274 (329)
T cd05618 262 HPFFRNVDWDLME 274 (329)
T ss_pred CCCCCCCCHHHHH
Confidence 9999998776443
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-37 Score=354.67 Aligned_cols=251 Identities=26% Similarity=0.394 Sum_probs=202.4
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHH-HHHhcCCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVA-TLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~-iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||+||+|+++.+|+.||||++..... .......+.+|.. +++.++||||++++++|..
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~------------- 67 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT------------- 67 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEe-------------
Confidence 369999999999999999999999999975322 1122344555554 5678999999999987732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...+|+|||||+ ++|..++.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~ 120 (323)
T cd05575 68 ---------------------------ADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYR 120 (323)
T ss_pred ---------------------------CCEEEEEEcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeC
Confidence 456899999997 5899999888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dikp~NIll~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~ 184 (323)
T cd05575 121 DLKPENILLDSQGHVVLTDFGLCKEGIEHS---------------KTTSTFCGTPEYLAPEVLRK-QPYDRTVDWWCLGA 184 (323)
T ss_pred CCCHHHeEECCCCcEEEeccCCCcccccCC---------------CccccccCChhhcChhhhcC-CCCCccccccccch
Confidence 999999999999999999999986421110 11234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH----HHHHhccCCCCchHHH
Q 000993 624 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQDALPPQMEYEL 696 (1196)
Q Consensus 624 iLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta----~eiL~~~~~~~~~~~~ 696 (1196)
++|||++ ||......+............++ ..++.+.++|++||+.||.+||++ .++++|+||....+..
T Consensus 185 il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~~~ 261 (323)
T cd05575 185 VLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKP---NISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINWDD 261 (323)
T ss_pred hhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCHHH
Confidence 9999997 88765555444444433333333 346789999999999999999987 6999999999876653
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-37 Score=345.52 Aligned_cols=253 Identities=30% Similarity=0.493 Sum_probs=200.6
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||+|+||.||+|+++.+|+.||+|.++...........+.+|+.+++.++||||+++++++.
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~----------- 69 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLH----------- 69 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhc-----------
Confidence 488899999999999999999999999999999765443334456788999999999999999997762
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
+...+|++|||++++|.+++.. ...+++..++.++.||+.||.|||++||
T Consensus 70 -----------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i 120 (284)
T cd07839 70 -----------------------------SDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNV 120 (284)
T ss_pred -----------------------------cCCceEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 2356899999999999888765 4679999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+||||||+||+++.++.+||+|||+++...... .......+++.|+|||++.+...++.++||||
T Consensus 121 ~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws 185 (284)
T cd07839 121 LHRDLKPQNLLINKNGELKLADFGLARAFGIPV---------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWS 185 (284)
T ss_pred ecCCCCHHHEEEcCCCcEEECccchhhccCCCC---------------CCcCCCccccCCcChHHHhCCcccCcHHHHHH
Confidence 999999999999999999999999997543211 01123467899999999887556799999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhh------------------cCCCC---------CccccCCHHHHHHHHHcc
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQ------------------KGELP---------PSWVAKFSEQESLLRRLM 670 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~------------------~~~~p---------~~~~~~~~~l~~LI~~cL 670 (1196)
|||++|||++ ||......+.....+.. ....+ ......+++++++|++||
T Consensus 186 lG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 265 (284)
T cd07839 186 AGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLL 265 (284)
T ss_pred HHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHh
Confidence 9999999996 54332221111111100 00000 011234568899999999
Q ss_pred cCCCCCCCCHHHHHhccCC
Q 000993 671 SPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~~~~ 689 (1196)
+.||.+|||++++++|+||
T Consensus 266 ~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 266 VCNPVQRISAEEALQHPYF 284 (284)
T ss_pred cCChhhcCCHHHHhcCCCC
Confidence 9999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=342.46 Aligned_cols=253 Identities=29% Similarity=0.478 Sum_probs=202.6
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||.|+||.||+|+++.+++.||||+++...........+.+|+.+++.++||||+++++++.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------- 70 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQ---------- 70 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEee----------
Confidence 5889999999999999999999999999999987654443445678899999999999999999998732
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY---DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~---~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+||||++++|.+++... ..+++..++.++.||+.||+|||++
T Consensus 71 ------------------------------~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~ 120 (285)
T cd07861 71 ------------------------------ESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR 120 (285)
T ss_pred ------------------------------CCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3568999999999998888643 4689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|++||||||+||+++.++.+||+|||++....... .......+++.|+|||++.+...++.++||
T Consensus 121 ~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv 185 (285)
T cd07861 121 RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV---------------RVYTHEVVTLWYRAPEVLLGSPRYSTPVDI 185 (285)
T ss_pred CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc---------------ccccCCcccccccChHHhcCCCCcCcHHHH
Confidence 99999999999999999999999999997542111 011234678999999998775567899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcC--------------------------CCCCccccCCHHHHHHHHHc
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKG--------------------------ELPPSWVAKFSEQESLLRRL 669 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~--------------------------~~p~~~~~~~~~l~~LI~~c 669 (1196)
|||||++|+|++ ||................. .........++++.++|++|
T Consensus 186 ~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 265 (285)
T cd07861 186 WSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKM 265 (285)
T ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHH
Confidence 999999999997 6654332222111111000 00011223567889999999
Q ss_pred ccCCCCCCCCHHHHHhccCC
Q 000993 670 MSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 670 L~~dP~~RPta~eiL~~~~~ 689 (1196)
|+.||.+|||+.+++.|+||
T Consensus 266 l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 266 LIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred hcCChhhCCCHHHHhcCCCC
Confidence 99999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-37 Score=352.22 Aligned_cols=252 Identities=27% Similarity=0.400 Sum_probs=203.2
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||+||+|+++.+++.||||+++.... .......+..|..+++.+ +||||+++++++.+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~------------- 67 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQT------------- 67 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEe-------------
Confidence 369999999999999999999999999975421 112334566788888764 99999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...+|+||||++ |+|.+++.....+++.++..++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHr 120 (316)
T cd05619 68 ---------------------------KENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYR 120 (316)
T ss_pred ---------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeC
Confidence 356899999996 5999999888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~ 184 (316)
T cd05619 121 DLKLDNILLDTDGHIKIADFGMCKENMLGD---------------AKTCTFCGTPDYIAPEILLG-QKYNTSVDWWSFGV 184 (316)
T ss_pred CCCHHHEEECCCCCEEEccCCcceECCCCC---------------CceeeecCCccccCHHHHcC-CCCCchhhhhhHHH
Confidence 999999999999999999999986421110 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHH-HHHhccCCCCchHHHH
Q 000993 624 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT-ELLQDALPPQMEYELL 697 (1196)
Q Consensus 624 iLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~-eiL~~~~~~~~~~~~~ 697 (1196)
++|||++ ||......+............| ...+.+++++|.+||+.||.+||++. ++++|+||....+..+
T Consensus 185 il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~~~~~ 259 (316)
T cd05619 185 LLYEMLIGQSPFHGHDEEELFQSIRMDNPCYP---RWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREIDWSAL 259 (316)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC---ccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCCHHHH
Confidence 9999997 8876655444333322222222 23456899999999999999999996 8999999999876544
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-37 Score=359.43 Aligned_cols=262 Identities=24% Similarity=0.382 Sum_probs=209.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.++|++.+.||+|+||.||+|+++.+++.||+|++..... .......+.+|+.+++.++||||++++++|.
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~-------- 113 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ-------- 113 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE--------
Confidence 4799999999999999999999999999999999864322 2223456788999999999999999998873
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...++|+|||||+ ++|.+++.. ..+++..++.++.||+.||+|||+
T Consensus 114 --------------------------------~~~~~~lv~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~ 160 (371)
T cd05622 114 --------------------------------DDRYLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHS 160 (371)
T ss_pred --------------------------------cCCEEEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 589888865 458999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC---CCCC
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP---KIDE 614 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~~s~ 614 (1196)
+||+||||||+|||++.++++||+|||+++.+.... .......+||+.|||||++.+.. .++.
T Consensus 161 ~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~--------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~ 226 (371)
T cd05622 161 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGR 226 (371)
T ss_pred CCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCC--------------cccccCcccCccccCHHHHhccCCCccCCC
Confidence 999999999999999999999999999997643211 01123457999999999987532 3789
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC-CCccccCCHHHHHHHHHcccCCCCC--CCCHHHHHhccC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQDAL 688 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~~l~~LI~~cL~~dP~~--RPta~eiL~~~~ 688 (1196)
++|||||||++|||++ ||...........+....... .+.....++.++++|.+||..++.+ |++++++++|+|
T Consensus 227 ~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~ 306 (371)
T cd05622 227 ECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 306 (371)
T ss_pred ccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcc
Confidence 9999999999999996 887665554444444332222 2233456789999999999854443 789999999999
Q ss_pred CCCchHHH
Q 000993 689 PPQMEYEL 696 (1196)
Q Consensus 689 ~~~~~~~~ 696 (1196)
|.+..+.+
T Consensus 307 ~~~~~~~~ 314 (371)
T cd05622 307 FKNDQWAW 314 (371)
T ss_pred cCCCChhH
Confidence 98866544
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=345.40 Aligned_cols=258 Identities=24% Similarity=0.393 Sum_probs=206.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|.+.+.||.|+||.||+|+++.+++.||+|.++..... .....+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~-------- 75 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHT-------- 75 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCCCCcceEEEEEec--------
Confidence 57899999999999999999999999999999998754322 233467789999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+||||++++|.+++... ..+++..++.++.||+.||+|||++
T Consensus 76 --------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~ 123 (301)
T cd07873 76 --------------------------------EKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRR 123 (301)
T ss_pred --------------------------------CCeEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3568999999999999888754 5689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||++....... .......+++.|+|||++.+...++.++||
T Consensus 124 ~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv 188 (301)
T cd07873 124 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT---------------KTYSNEVVTLWYRPPDILLGSTDYSTQIDM 188 (301)
T ss_pred CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC---------------CcccccceeecccCcHHHhCCCCCccHHHH
Confidence 99999999999999999999999999997532111 011234678999999998775568899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhc-------------------CCCCC--------ccccCCHHHHHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK-------------------GELPP--------SWVAKFSEQESLLRR 668 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~-------------------~~~p~--------~~~~~~~~l~~LI~~ 668 (1196)
|||||++|||++ ||......+......... ...|. .....++.+++||.+
T Consensus 189 ~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 268 (301)
T cd07873 189 WGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSK 268 (301)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHH
Confidence 999999999997 665443332221111100 00110 112345678999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCch
Q 000993 669 LMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||+.||.+|||++++++|+||....
T Consensus 269 ml~~dp~~R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 269 LLQFEGRKRISAEEAMKHPYFHCLG 293 (301)
T ss_pred HhcCCcccCcCHHHHhcCccccccc
Confidence 9999999999999999999998765
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-38 Score=357.99 Aligned_cols=249 Identities=25% Similarity=0.423 Sum_probs=205.1
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
|.-++.||.|+||.||-|++..+.+.||||++.... .+.+.-+++++||..|++++|||+|.|.|||+.
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLr---------- 97 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLR---------- 97 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeec----------
Confidence 555788999999999999999999999999998654 344556789999999999999999999999954
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
....|+|||||-|+-.|++.- ..++.+-++..|+.+.+.||+|||+++.
T Consensus 98 ------------------------------e~TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~ 147 (948)
T KOG0577|consen 98 ------------------------------EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNR 147 (948)
T ss_pred ------------------------------cchHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhH
Confidence 334589999999988888764 4578999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--CCCCCCcchh
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKADM 618 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~s~ksDV 618 (1196)
||||||..|||+++.|.|||+|||.|.... ...+++|||.|||||++.. .+.|+-++||
T Consensus 148 IHRDiKAGNILLse~g~VKLaDFGSAsi~~-------------------PAnsFvGTPywMAPEVILAMDEGqYdgkvDv 208 (948)
T KOG0577|consen 148 IHRDIKAGNILLSEPGLVKLADFGSASIMA-------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDV 208 (948)
T ss_pred HhhhccccceEecCCCeeeeccccchhhcC-------------------chhcccCCccccchhHheeccccccCCccce
Confidence 999999999999999999999999997642 2367899999999998753 3679999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
|||||+..||.- |+....-+..... +.++....-.....+..+++|+..||++-|.+|||.+++|+|+|...
T Consensus 209 WSLGITCIELAERkPPlFnMNAMSALYH-IAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R 283 (948)
T KOG0577|consen 209 WSLGITCIELAERKPPLFNMNAMSALYH-IAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLR 283 (948)
T ss_pred eeccchhhhhhhcCCCccCchHHHHHHH-HHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhcc
Confidence 999999999984 5444433333333 33232221122233457899999999999999999999999998644
|
|
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=343.79 Aligned_cols=249 Identities=28% Similarity=0.415 Sum_probs=198.0
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCCc
Q 000993 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 467 (1196)
Q Consensus 389 LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 467 (1196)
||+|+||+||+|.++.+|+.||+|++...... ......+..|+.+++.++||||+++++++.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~----------------- 63 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQ----------------- 63 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEc-----------------
Confidence 69999999999999999999999998754322 122356788999999999999999988762
Q ss_pred ccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCCCcc
Q 000993 468 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAHIHGQGIIH 542 (1196)
Q Consensus 468 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qIa~gL~yLHs~gIiH 542 (1196)
....+|+|||||+ ++|.+.+.. ...+++..++.++.||+.||+|||++||+|
T Consensus 64 -----------------------~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H 120 (280)
T cd05608 64 -----------------------TKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIY 120 (280)
T ss_pred -----------------------CCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 2356899999997 588877642 346999999999999999999999999999
Q ss_pred cCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHH
Q 000993 543 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622 (1196)
Q Consensus 543 rDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlG 622 (1196)
|||||+||+++.++.+||+|||++..+.... .......||+.|+|||++.+ ..++.++||||||
T Consensus 121 ~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslG 184 (280)
T cd05608 121 RDLKPENVLLDNDGNVRISDLGLAVELKDGQ---------------SKTKGYAGTPGFMAPELLQG-EEYDFSVDYFALG 184 (280)
T ss_pred CCCCHHHEEECCCCCEEEeeCccceecCCCC---------------ccccccCCCcCccCHHHhcC-CCCCccccHHHHH
Confidence 9999999999999999999999997543211 01233578999999999988 5789999999999
Q ss_pred HHHHHhhc---CCchhHHH----HHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccCCC
Q 000993 623 IVFFELWH---PFSTAMER----QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPP 690 (1196)
Q Consensus 623 viLyELlt---Pf~~~~~~----~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~~~ 690 (1196)
|++|||++ ||...... ........ . ........++.+.+++.+||+.||.+|| +++++++|+||.
T Consensus 185 ~il~el~~g~~pf~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~ 261 (280)
T cd05608 185 VTLYEMIAARGPFRARGEKVENKELKQRILN--D-SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFR 261 (280)
T ss_pred HHHHHHHhCCCCCCCCCcchhHHHHHHhhcc--c-CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhh
Confidence 99999996 77643221 11111111 1 1112234567899999999999999999 889999999999
Q ss_pred CchHHH
Q 000993 691 QMEYEL 696 (1196)
Q Consensus 691 ~~~~~~ 696 (1196)
+..+..
T Consensus 262 ~~~~~~ 267 (280)
T cd05608 262 DLNWRQ 267 (280)
T ss_pred cCCHhH
Confidence 876653
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=352.13 Aligned_cols=264 Identities=23% Similarity=0.386 Sum_probs=212.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++.+.||+|+||.||+++++.+++.||+|++..... .......+.+|+.++..++||||+++++++.
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------- 71 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQ--------- 71 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEe---------
Confidence 479999999999999999999999999999999864321 1223345788999999999999999998873
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
+...+|+|||||+ |+|.+++.+ ...+++..++.++.||+.||+|||+
T Consensus 72 -------------------------------~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~ 120 (332)
T cd05623 72 -------------------------------DENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQ 120 (332)
T ss_pred -------------------------------cCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 699999976 4679999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC----CCCCC
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKID 613 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~s 613 (1196)
+||+||||||+|||++.++.+||+|||++..+.... .......+||+.|+|||++.+ ...++
T Consensus 121 ~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 186 (332)
T cd05623 121 LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG--------------TVQSSVAVGTPDYISPEILQAMEDGKGKYG 186 (332)
T ss_pred CCeEecCCCHHHEEECCCCCEEEeecchheecccCC--------------cceecccccCccccCHHHHhccccCCCCCC
Confidence 999999999999999999999999999987542111 011233579999999999863 24588
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHcccCCCCC--CCCHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~~~l~~LI~~cL~~dP~~--RPta~eiL~~ 686 (1196)
.++|||||||++|||++ ||......+......... ..+|......++++++||++||+.+|.+ |+++.++++|
T Consensus 187 ~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 187 PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 99999999999999996 887666555544444332 2244444567789999999999765554 7899999999
Q ss_pred cCCCCchHHHHH
Q 000993 687 ALPPQMEYELLD 698 (1196)
Q Consensus 687 ~~~~~~~~~~~~ 698 (1196)
+||.+..+..+.
T Consensus 267 ~~f~~~~~~~~~ 278 (332)
T cd05623 267 PFFTGIDWDNIR 278 (332)
T ss_pred CCcCCCCHHHHh
Confidence 999998876553
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=351.29 Aligned_cols=254 Identities=25% Similarity=0.395 Sum_probs=205.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.++||.|+||.||+|.++.++..+|+|++.... .......+.+|+++++.++||||++++++|.+
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--------- 74 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYS--------- 74 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEE---------
Confidence 68999999999999999999999999999999987542 33445678999999999999999999998843
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC-
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ- 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~- 538 (1196)
...+|+|||||+ ++|.+++.....+++..+..++.||+.||+|||+.
T Consensus 75 -------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 123 (333)
T cd06650 75 -------------------------------DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 123 (333)
T ss_pred -------------------------------CCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 346899999996 59999998888899999999999999999999975
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
+|+||||||+|||++.++.+||+|||++..+... ......||+.|+|||++.+ ..++.++||
T Consensus 124 ~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv 185 (333)
T cd06650 124 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----------------MANSFVGTRSYMSPERLQG-THYSVQSDI 185 (333)
T ss_pred CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh-----------------ccccCCCCccccCHHHhcC-CCCCcHHHH
Confidence 7999999999999999999999999999754211 1123478999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHH------------------------------------------hhhcCCCCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSD------------------------------------------LKQKGELPP 653 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~------------------------------------------l~~~~~~p~ 653 (1196)
|||||++|||++ ||............ .......+.
T Consensus 186 wslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (333)
T cd06650 186 WSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPK 265 (333)
T ss_pred HHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCcc
Confidence 999999999996 77544332211000 000000011
Q ss_pred c-cccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 654 S-WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 654 ~-~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
. ....+.++++||.+||+.||++|||+.++++|+|+....
T Consensus 266 ~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 306 (333)
T cd06650 266 LPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE 306 (333)
T ss_pred CCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence 0 012346789999999999999999999999999997654
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-39 Score=341.88 Aligned_cols=250 Identities=26% Similarity=0.472 Sum_probs=210.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
+-|.++.+||+|+||.||+|.|+.+|+.+|||++... ...+++.+|+.++.++..|++|+|||.|+.
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK--------- 99 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD----TDLQEIIKEISIMQQCKSKYVVKYYGSYFK--------- 99 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc----chHHHHHHHHHHHHHcCCchhhhhhhhhcc---------
Confidence 4578899999999999999999999999999988642 346789999999999999999999998854
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|||||||+ |+..++++. +.++++.++..++...+.||+|||..
T Consensus 100 -------------------------------~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~ 148 (502)
T KOG0574|consen 100 -------------------------------HSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDL 148 (502)
T ss_pred -------------------------------CCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH
Confidence 346899999997 799999974 46799999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
.-||||||..|||++.+|++||+|||.|..+.... ...++..|||.|||||+++. -.|+.++||
T Consensus 149 ~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM---------------AKRNTVIGTPFWMAPEVI~E-IGY~~~ADI 212 (502)
T KOG0574|consen 149 KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM---------------AKRNTVIGTPFWMAPEVIEE-IGYDTKADI 212 (502)
T ss_pred HHHHhhcccccEEEcccchhhhhhccccchhhhhH---------------HhhCccccCcccccHHHHHH-hccchhhhH
Confidence 99999999999999999999999999998654221 23466799999999999997 469999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccc---cCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWV---AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~---~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||||++..||.- ||.+..++.....+ ....||.+. ..+.++.++|+.||-+.|++|-|+-++++|+|.++-
T Consensus 213 WSLGITaIEMAEG~PPYsDIHPMRAIFMI---PT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA 289 (502)
T KOG0574|consen 213 WSLGITAIEMAEGRPPYSDIHPMRAIFMI---PTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNA 289 (502)
T ss_pred hhhcchhhhhhcCCCCcccccccceeEec---cCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCC
Confidence 999999999984 77776665433322 122233222 234578899999999999999999999999998876
Q ss_pred h
Q 000993 693 E 693 (1196)
Q Consensus 693 ~ 693 (1196)
+
T Consensus 290 ~ 290 (502)
T KOG0574|consen 290 P 290 (502)
T ss_pred C
Confidence 4
|
|
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=367.79 Aligned_cols=266 Identities=27% Similarity=0.425 Sum_probs=215.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|.+.+.||+|+||+||+|++..+|+.||||++.....+......+.+|+.++..++|+||++++..+.....
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~----- 105 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP----- 105 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc-----
Confidence 468999999999999999999999999999999998766555566778899999999999999999877643210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----CCCCHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----~~l~e~~~~~i~~qIa~gL~y 534 (1196)
........+++||||++ |+|.+++... ..+++..++.++.||+.||+|
T Consensus 106 ---------------------------~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~ 158 (496)
T PTZ00283 106 ---------------------------RNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHH 158 (496)
T ss_pred ---------------------------cCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHH
Confidence 00112345789999997 6999988643 468999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||+++|+||||||+|||++.++.+||+|||+++.+..... .......+||+.|+|||++.+ ..++.
T Consensus 159 lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~-------------~~~~~~~~Gt~~Y~aPE~~~~-~~~s~ 224 (496)
T PTZ00283 159 VHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVS-------------DDVGRTFCGTPYYVAPEIWRR-KPYSK 224 (496)
T ss_pred HHhCCEecCCCCHHHEEEeCCCCEEEEecccCeecccccc-------------ccccccccCCcceeCHHHhCC-CCCCc
Confidence 9999999999999999999999999999999986532110 011234579999999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
++|||||||++|||++ ||.............. ...++.....++++.+++.+||+.||.+||++.++++|+|++.
T Consensus 225 k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~ 302 (496)
T PTZ00283 225 KADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLA--GRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL 302 (496)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence 9999999999999997 8876655554444332 2233333456789999999999999999999999999998765
Q ss_pred ch
Q 000993 692 ME 693 (1196)
Q Consensus 692 ~~ 693 (1196)
..
T Consensus 303 ~~ 304 (496)
T PTZ00283 303 FI 304 (496)
T ss_pred hh
Confidence 43
|
|
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=354.21 Aligned_cols=253 Identities=25% Similarity=0.402 Sum_probs=198.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.+++|+.+++||+|+||.||+|++..+|+.||||++.... .......+.+|+.+++.++||||++++++|.+
T Consensus 72 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------- 143 (353)
T PLN00034 72 SLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDH------- 143 (353)
T ss_pred CHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEecc-------
Confidence 4578999999999999999999999999999999986432 33445678999999999999999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+|||||.+ +|.+. ....+..+..++.||+.||+|||+
T Consensus 144 ---------------------------------~~~~~lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~ 186 (353)
T PLN00034 144 ---------------------------------NGEIQVLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHR 186 (353)
T ss_pred ---------------------------------CCeEEEEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999975 66532 345678888999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC----CCCC
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW----PKID 613 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~~s 613 (1196)
+||+||||||+|||++.++.+||+|||+++.+.... .......||+.|+|||++... ...+
T Consensus 187 ~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 251 (353)
T PLN00034 187 RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM---------------DPCNSSVGTIAYMSPERINTDLNHGAYDG 251 (353)
T ss_pred CCEeecCCCHHHEEEcCCCCEEEcccccceeccccc---------------ccccccccCccccCccccccccccCcCCC
Confidence 999999999999999999999999999997643211 011345799999999987531 2345
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHH--HHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMER--QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~--~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
.++|||||||++|||++ ||...... ........ ....+......+.++.+||.+||+.||.+|||+.++++|+|
T Consensus 252 ~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~ 330 (353)
T PLN00034 252 YAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAIC-MSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPF 330 (353)
T ss_pred cchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHh-ccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 68999999999999996 77532211 11111111 12223333456678999999999999999999999999999
Q ss_pred CCCc
Q 000993 689 PPQM 692 (1196)
Q Consensus 689 ~~~~ 692 (1196)
+...
T Consensus 331 ~~~~ 334 (353)
T PLN00034 331 ILRA 334 (353)
T ss_pred cccC
Confidence 9874
|
|
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-36 Score=341.92 Aligned_cols=258 Identities=27% Similarity=0.404 Sum_probs=206.2
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.|++.+.||+|+||+||++.+..+++.||||++...... ......+.+|+.+++.++||||+++++++.
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~---------- 70 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE---------- 70 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeec----------
Confidence 488999999999999999999999999999998754322 122345778999999999999999998762
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....+|+|||||+ ++|.+++... ..+++..+..++.||+.||+|||+
T Consensus 71 ------------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 120 (285)
T cd05605 71 ------------------------------TKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHR 120 (285)
T ss_pred ------------------------------CCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2357899999996 5888877543 459999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+||++++++.++|+|||++....... .....+||+.|+|||++.+ ..++.++|
T Consensus 121 ~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~D 183 (285)
T cd05605 121 ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE----------------TIRGRVGTVGYMAPEVVKN-ERYTFSPD 183 (285)
T ss_pred CCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC----------------ccccccCCCCccCcHHhcC-CCCCcccc
Confidence 999999999999999999999999999987542111 1123478999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHH---HHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhc
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQI---VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQD 686 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~---~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~ 686 (1196)
||||||++|||++ ||........ ....+.. ..+......++.+.+||.+||..||.+|| +++++++|
T Consensus 184 iws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 184 WWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKE--DQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred chhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhh--cccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 9999999999996 8865433221 1111111 11222234567899999999999999999 99999999
Q ss_pred cCCCCchHHHHH
Q 000993 687 ALPPQMEYELLD 698 (1196)
Q Consensus 687 ~~~~~~~~~~~~ 698 (1196)
+||....+.-++
T Consensus 262 ~~~~~~~~~~~~ 273 (285)
T cd05605 262 PFFRTANFKRLE 273 (285)
T ss_pred cCccCCCHHHHh
Confidence 999987666443
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=351.36 Aligned_cols=264 Identities=24% Similarity=0.402 Sum_probs=212.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++.+.||+|+||.||+++++.+++.||+|++.... ........+.+|..+++.++||||+++++++.
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~--------- 71 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQ--------- 71 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEE---------
Confidence 57999999999999999999999999999999986432 12223445788999999999999999998873
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...++|+|||||+ |+|.+++.. ...+++..+..++.||+.||+|||+
T Consensus 72 -------------------------------~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~ 120 (331)
T cd05624 72 -------------------------------DENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQ 120 (331)
T ss_pred -------------------------------cCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 599999976 4679999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC----CCCC
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW----PKID 613 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~~s 613 (1196)
+||+||||||+|||++.++.+||+|||+++...... .......+||+.|+|||++.+. ..++
T Consensus 121 ~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 186 (331)
T cd05624 121 LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG--------------TVQSSVAVGTPDYISPEILQAMEDGMGKYG 186 (331)
T ss_pred CCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC--------------ceeeccccCCcccCCHHHHhccccCCCCCC
Confidence 999999999999999999999999999997543211 0112235799999999998752 3478
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHcccCCCCC--CCCHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~~~l~~LI~~cL~~dP~~--RPta~eiL~~ 686 (1196)
.++|||||||+||||++ ||......+....+.... ..+|+.+...+.+++++|.+||+.++.+ |++++++++|
T Consensus 187 ~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 187 PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred CcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 89999999999999996 887665554444443322 2244455556789999999999876654 5799999999
Q ss_pred cCCCCchHHHHH
Q 000993 687 ALPPQMEYELLD 698 (1196)
Q Consensus 687 ~~~~~~~~~~~~ 698 (1196)
+||....+....
T Consensus 267 ~~f~~~~~~~~~ 278 (331)
T cd05624 267 AFFEGIDWENIR 278 (331)
T ss_pred CCcCCCCHHHHh
Confidence 999998877553
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-37 Score=354.67 Aligned_cols=252 Identities=26% Similarity=0.397 Sum_probs=202.3
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc---CCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL---QHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 389 LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L---~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
||+|+||+||+|+++.+|+.||||++..... .......+..|..++..+ .||||++++++|.
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~-------------- 66 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQ-------------- 66 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEe--------------
Confidence 7999999999999999999999999864322 112234455677777665 6999999998773
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
....+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++||+||
T Consensus 67 --------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHr 120 (330)
T cd05586 67 --------------------------TDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYR 120 (330)
T ss_pred --------------------------cCCeEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 2456899999996 5899999888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+...++.++|||||||
T Consensus 121 Dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv 185 (330)
T cd05586 121 DLKPENILLDATGHIALCDFGLSKANLTDN---------------KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGV 185 (330)
T ss_pred cCCHHHeEECCCCCEEEecCCcCcCCCCCC---------------CCccCccCCccccCHHHHcCCCCCCCccceecccc
Confidence 999999999999999999999987432110 11234579999999999987556899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC----CHHHHHhccCCCCchHHH
Q 000993 624 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP----SATELLQDALPPQMEYEL 696 (1196)
Q Consensus 624 iLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP----ta~eiL~~~~~~~~~~~~ 696 (1196)
++|||++ ||......+...........+|.. ..++++.+||++||+.||.+|| ++.++++|+||....+..
T Consensus 186 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~~~~ 263 (330)
T cd05586 186 LVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKN--VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDWDL 263 (330)
T ss_pred EEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCc--cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCCHHH
Confidence 9999996 887655544444333333333322 3467899999999999999998 799999999999877654
Q ss_pred H
Q 000993 697 L 697 (1196)
Q Consensus 697 ~ 697 (1196)
+
T Consensus 264 ~ 264 (330)
T cd05586 264 L 264 (330)
T ss_pred H
Confidence 4
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=346.91 Aligned_cols=250 Identities=26% Similarity=0.435 Sum_probs=189.0
Q ss_pred EeeeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcC
Q 000993 386 LQPLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 463 (1196)
Q Consensus 386 ~~~LG~G~fG~Vy~a~~~--~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~ 463 (1196)
.++||+|+||+||+|+++ .+++.||+|.+..... ...+.+|+.+|+.++||||++++++|...
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~----------- 70 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSH----------- 70 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC----cHHHHHHHHHHHhcCCCCCcceeeeEecC-----------
Confidence 368999999999999976 3678999999864322 34577899999999999999999887432
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc---------CCCCHHHHHHHHHHHHHHHHH
Q 000993 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY---------DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 464 ~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~---------~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+|++|||++++|.+++... ..+++..++.++.||+.||+|
T Consensus 71 ---------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~ 123 (317)
T cd07868 71 ---------------------------ADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHY 123 (317)
T ss_pred ---------------------------CCcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHH
Confidence 23568999999999998887532 248899999999999999999
Q ss_pred HHhCCCcccCCCcCcEEe----cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC
Q 000993 535 IHGQGIIHRDLTPNNIFF----DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILl----d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 610 (1196)
||++||+||||||+|||+ +.++.+||+|||+|+........ ........||+.|+|||++.+..
T Consensus 124 LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~------------~~~~~~~~~t~~y~aPE~~~~~~ 191 (317)
T cd07868 124 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP------------LADLDPVVVTFWYRAPELLLGAR 191 (317)
T ss_pred HHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCcc------------ccccCCccccccccCCHHHcCCC
Confidence 999999999999999999 45578999999999865321100 01123457899999999998756
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhHHH---------HHHHHHhhhcC-----------CCC---------------
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAMER---------QIVLSDLKQKG-----------ELP--------------- 652 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~~~---------~~~~~~l~~~~-----------~~p--------------- 652 (1196)
.++.++||||+||++|||++ ||...... ..........+ ..+
T Consensus 192 ~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (317)
T cd07868 192 HYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYT 271 (317)
T ss_pred CcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccC
Confidence 68999999999999999997 66422110 00000000000 000
Q ss_pred ---------CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 653 ---------PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 653 ---------~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
.......+++.+||++||+.||.+|||++++|+||||
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 272 NCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred cccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 0001123467899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=349.81 Aligned_cols=253 Identities=22% Similarity=0.368 Sum_probs=203.6
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||+||+|+++.+++.||+|+++.... .......+.+|+.++..+ +||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~------------- 67 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQT------------- 67 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEe-------------
Confidence 369999999999999999999999999975432 223345688899999888 69999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...+|+|||||+ ++|..++.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHr 120 (327)
T cd05617 68 ---------------------------TSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYR 120 (327)
T ss_pred ---------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 456899999996 5899988888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGv 184 (327)
T cd05617 121 DLKLDNVLLDADGHIKLTDYGMCKEGLGPG---------------DTTSTFCGTPNYIAPEILRG-EEYGFSVDWWALGV 184 (327)
T ss_pred CCCHHHEEEeCCCCEEEeccccceeccCCC---------------CceecccCCcccCCHHHHCC-CCCCchheeehhHH
Confidence 999999999999999999999987421110 01234579999999999987 57899999999999
Q ss_pred HHHHhhc---CCchh------HHHHHHHHHhhhc-CCCCCccccCCHHHHHHHHHcccCCCCCCCC------HHHHHhcc
Q 000993 624 VFFELWH---PFSTA------MERQIVLSDLKQK-GELPPSWVAKFSEQESLLRRLMSPSPSDRPS------ATELLQDA 687 (1196)
Q Consensus 624 iLyELlt---Pf~~~------~~~~~~~~~l~~~-~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt------a~eiL~~~ 687 (1196)
+||||++ ||... ............. ..+| ...+..+.++|++||+.||.+|++ ++++++|+
T Consensus 185 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~ 261 (327)
T cd05617 185 LMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIP---RFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHT 261 (327)
T ss_pred HHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCC---CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCC
Confidence 9999996 77421 1122222222222 2222 235678999999999999999997 67999999
Q ss_pred CCCCchHHHHH
Q 000993 688 LPPQMEYELLD 698 (1196)
Q Consensus 688 ~~~~~~~~~~~ 698 (1196)
||....++.+.
T Consensus 262 ~f~~~~~~~~~ 272 (327)
T cd05617 262 FFRSIDWDLLE 272 (327)
T ss_pred CCCCCCHHHHH
Confidence 99999877553
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=354.29 Aligned_cols=247 Identities=26% Similarity=0.344 Sum_probs=193.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.+|++++.||+|+||.||+|++..+++.||+|+.... ....|+.+++.++||||++++++|.+
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--------~~~~E~~~l~~l~h~~iv~~~~~~~~--------- 128 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--------TTLIEAMLLQNVNHPSVIRMKDTLVS--------- 128 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--------ccHHHHHHHHhCCCCCCcChhheEEe---------
Confidence 4799999999999999999999999999999975321 23568999999999999999988743
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
....|+||||+.++|.+++.. ...+++..++.++.||+.||+|||++|
T Consensus 129 -------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 177 (357)
T PHA03209 129 -------------------------------GAITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQR 177 (357)
T ss_pred -------------------------------CCeeEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 346789999999999988865 456999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+|||++.++.+||+|||+++..... .......||+.|+|||++.+ ..++.++|||
T Consensus 178 ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Diw 240 (357)
T PHA03209 178 IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA----------------PAFLGLAGTVETNAPEVLAR-DKYNSKADIW 240 (357)
T ss_pred eecCCCCHHHEEECCCCCEEEecCccccccccC----------------cccccccccccccCCeecCC-CCCCchhhHH
Confidence 999999999999999999999999999743211 01234579999999999987 5689999999
Q ss_pred HHHHHHHHhhc----CCchhH-----H----HHHHHHHhhhcCCCCCcc-------------------------------
Q 000993 620 SLGIVFFELWH----PFSTAM-----E----RQIVLSDLKQKGELPPSW------------------------------- 655 (1196)
Q Consensus 620 SlGviLyELlt----Pf~~~~-----~----~~~~~~~l~~~~~~p~~~------------------------------- 655 (1196)
||||++|||++ +|.... . .......+...+..|..+
T Consensus 241 SlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (357)
T PHA03209 241 SAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQR 320 (357)
T ss_pred HHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhc
Confidence 99999999985 222110 0 011111111111111100
Q ss_pred ccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 656 VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 656 ~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
...+.++.+||.+||+.||.+|||+.++|+||||.++
T Consensus 321 ~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~~ 357 (357)
T PHA03209 321 VNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQL 357 (357)
T ss_pred cCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhccC
Confidence 1223456779999999999999999999999999864
|
|
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=352.08 Aligned_cols=252 Identities=27% Similarity=0.382 Sum_probs=202.8
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHH-HHHhcCCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVA-TLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~-iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||+||+|+++.+|+.||||++..... .......+.+|.. +++.++||||++++++|..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~------------- 67 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT------------- 67 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEec-------------
Confidence 369999999999999999999999999975422 2223345556654 4677899999999987732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...+|+|||||+ ++|...+.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~ 120 (325)
T cd05604 68 ---------------------------TEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYR 120 (325)
T ss_pred ---------------------------CCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 457899999997 5899998888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~ 184 (325)
T cd05604 121 DLKPENILLDSQGHVVLTDFGLCKEGIAQS---------------DTTTTFCGTPEYLAPEVIRK-QPYDNTVDWWCLGA 184 (325)
T ss_pred CCCHHHeEECCCCCEEEeecCCcccCCCCC---------------CCcccccCChhhCCHHHHcC-CCCCCcCccccccc
Confidence 999999999999999999999986421110 11234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH----HHHHhccCCCCchHHH
Q 000993 624 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQDALPPQMEYEL 696 (1196)
Q Consensus 624 iLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta----~eiL~~~~~~~~~~~~ 696 (1196)
++|||++ ||......+............++ ..+..+.++|++||..||.+||++ .++++|+||....+..
T Consensus 185 il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~~~ 261 (325)
T cd05604 185 VLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRP---GASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSWTD 261 (325)
T ss_pred eehhhhcCCCCCCCCCHHHHHHHHHcCCccCCC---CCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCHHH
Confidence 9999996 88766555544444433222232 456789999999999999999976 6999999999877654
Q ss_pred H
Q 000993 697 L 697 (1196)
Q Consensus 697 ~ 697 (1196)
.
T Consensus 262 ~ 262 (325)
T cd05604 262 L 262 (325)
T ss_pred H
Confidence 3
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-36 Score=377.78 Aligned_cols=261 Identities=31% Similarity=0.553 Sum_probs=211.7
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
....+++|++++.||+|+||+||+|+++.++..||+|++............+.+|+.+|+.|+|||||+++++|...
T Consensus 8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de--- 84 (1021)
T PTZ00266 8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNK--- 84 (1021)
T ss_pred CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEec---
Confidence 34557899999999999999999999999999999999986655555667899999999999999999999988542
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh----cCCCCHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVE 530 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qIa~ 530 (1196)
....+|||||||+ ++|.++|.. ...+++..++.|+.||+.
T Consensus 85 -----------------------------------~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ 129 (1021)
T PTZ00266 85 -----------------------------------ANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLH 129 (1021)
T ss_pred -----------------------------------CCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHH
Confidence 2356899999997 599998865 256999999999999999
Q ss_pred HHHHHHhC-------CCcccCCCcCcEEecC-----------------CCCeEEeccCcchhccccccccCCCCCCCCCC
Q 000993 531 GLAHIHGQ-------GIIHRDLTPNNIFFDA-----------------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586 (1196)
Q Consensus 531 gL~yLHs~-------gIiHrDLKp~NILld~-----------------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~ 586 (1196)
||+|||+. +||||||||+||||+. .+.+||+|||++..+....
T Consensus 130 ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s------------- 196 (1021)
T PTZ00266 130 ALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES------------- 196 (1021)
T ss_pred HHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccc-------------
Confidence 99999985 4999999999999964 2348999999997542111
Q ss_pred ccccCcCccccccCCCchhccCC-CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHH
Q 000993 587 VSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ 662 (1196)
Q Consensus 587 ~~~~~~~~~GT~~Y~APE~l~~~-~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l 662 (1196)
.....+||+.|+|||++.+. ..++.++||||||||||||++ ||............+.....+| ....++++
T Consensus 197 ---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lp--i~~~S~eL 271 (1021)
T PTZ00266 197 ---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLP--IKGKSKEL 271 (1021)
T ss_pred ---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCC--cCCCCHHH
Confidence 11335799999999998642 358899999999999999997 8865554444444444333222 23456789
Q ss_pred HHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 663 ESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 663 ~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
.+||..||+.+|.+||++.++|+|+|+...
T Consensus 272 ~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 272 NILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred HHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 999999999999999999999999887654
|
|
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=338.13 Aligned_cols=252 Identities=35% Similarity=0.561 Sum_probs=203.5
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCc
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 462 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~ 462 (1196)
|++.+.||+|+||+||+|++..+++.||+|++..............+|+.+++.++||||+++++.+.+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~----------- 69 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD----------- 69 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-----------
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-----------
Confidence 788999999999999999999999999999998765444444455679999999999999999988732
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCc
Q 000993 463 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 541 (1196)
Q Consensus 463 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIi 541 (1196)
...++++||||++ +|.+++.....+++..++.++.||+.||+|||++||+
T Consensus 70 -----------------------------~~~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~ 120 (260)
T PF00069_consen 70 -----------------------------DNYLYIVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIV 120 (260)
T ss_dssp -----------------------------SSEEEEEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred -----------------------------ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4577899999987 9999999888899999999999999999999999999
Q ss_pred ccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHH
Q 000993 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621 (1196)
Q Consensus 542 HrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSl 621 (1196)
||||||+||+++.++.++|+|||.+...... ........+|+.|+|||++.....++.++|||||
T Consensus 121 H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~---------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~sl 185 (260)
T PF00069_consen 121 HRDIKPENILLDENGEVKLIDFGSSVKLSEN---------------NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSL 185 (260)
T ss_dssp ESSBSGGGEEESTTSEEEESSGTTTEESTST---------------TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccc---------------cccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999998753110 1122445789999999999833678999999999
Q ss_pred HHHHHHhhc---CCchh---HHHHHHHHHhhhcCCC-CCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 622 GIVFFELWH---PFSTA---MERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 622 GviLyELlt---Pf~~~---~~~~~~~~~l~~~~~~-p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|+++|+|++ ||... ................ ........+.+.++|++||+.||++||++.++++||||
T Consensus 186 G~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 186 GIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred ccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 999999997 77655 2222222221111000 01111112689999999999999999999999999996
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=350.14 Aligned_cols=251 Identities=25% Similarity=0.369 Sum_probs=200.5
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHH-HHHHhcCCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREV-ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev-~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||+||+|+++.+++.||+|++..... .......+.+|. .+++.++||||+++++++.+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~------------- 67 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT------------- 67 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEc-------------
Confidence 369999999999999999999999999975321 112223444454 45678899999999987732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...+|+|||||++ +|.+++.....+.+..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHr 120 (325)
T cd05602 68 ---------------------------ADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYR 120 (325)
T ss_pred ---------------------------CCeEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 4568999999974 899999888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dlkp~Nili~~~~~~kl~DfG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (325)
T cd05602 121 DLKPENILLDSQGHIVLTDFGLCKENIEHN---------------GTTSTFCGTPEYLAPEVLHK-QPYDRTVDWWCLGA 184 (325)
T ss_pred CCCHHHeEECCCCCEEEccCCCCcccccCC---------------CCcccccCCccccCHHHHcC-CCCCCccccccccH
Confidence 999999999999999999999987432110 11234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHH----HHHhccCCCCchHHH
Q 000993 624 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT----ELLQDALPPQMEYEL 696 (1196)
Q Consensus 624 iLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~----eiL~~~~~~~~~~~~ 696 (1196)
++|||++ ||......+............+ ...++.+.++|++||+.||.+||++. ++++|+|+....+.-
T Consensus 185 il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~~~ 261 (325)
T cd05602 185 VLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK---PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINWDD 261 (325)
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCC---CCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCHHH
Confidence 9999996 8876555444433333222222 34567899999999999999999865 899999998876653
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=348.97 Aligned_cols=250 Identities=27% Similarity=0.388 Sum_probs=200.3
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHH-HHHhcCCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVA-TLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~-iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||.||+|+++.+|+.||+|++..... .......+.+|.. +++.++||||+++++++.
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~-------------- 66 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQ-------------- 66 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEE--------------
Confidence 369999999999999999999999999875322 1222344555554 678899999999998763
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
....+|+|||||+ ++|...+.....+++..++.++.||+.||+|||++||+||
T Consensus 67 --------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~ 120 (321)
T cd05603 67 --------------------------TAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYR 120 (321)
T ss_pred --------------------------cCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 2456899999997 5898888888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (321)
T cd05603 121 DLKPENILLDSQGHVVLTDFGLCKEGVEPE---------------ETTSTFCGTPEYLAPEVLRK-EPYDRTVDWWCLGA 184 (321)
T ss_pred cCCHHHeEECCCCCEEEccCCCCccCCCCC---------------CccccccCCcccCCHHHhcC-CCCCCcCcccccch
Confidence 999999999999999999999987421110 11234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH----HHHHhccCCCCchHH
Q 000993 624 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQDALPPQMEYE 695 (1196)
Q Consensus 624 iLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta----~eiL~~~~~~~~~~~ 695 (1196)
++|||++ ||..................+| ...+..+.++|.+||+.||.+||++ .++++|+|+....+.
T Consensus 185 il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~~ 260 (321)
T cd05603 185 VLYEMLYGLPPFYSRDVSQMYDNILHKPLQLP---GGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINWD 260 (321)
T ss_pred hhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCC---CCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCHH
Confidence 9999997 7876655444444333222233 2346689999999999999999875 599999999887655
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-37 Score=351.65 Aligned_cols=248 Identities=27% Similarity=0.388 Sum_probs=201.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.+++.+...||+|.||+||+|+|- -.||||+++....+.+..+.|.+||.+|++=+|.||+-+.|+|..
T Consensus 391 ~~ev~l~~rIGsGsFGtV~Rg~wh---GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~-------- 459 (678)
T KOG0193|consen 391 PEEVLLGERIGSGSFGTVYRGRWH---GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN-------- 459 (678)
T ss_pred HHHhhccceeccccccceeecccc---cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC--------
Confidence 356677889999999999999997 359999999988888888999999999999999999999999843
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
+.+.||+.+|.| +|+.+++- ...|+....+.|+.||++||.|||.
T Consensus 460 ---------------------------------p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHA 506 (678)
T KOG0193|consen 460 ---------------------------------PPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHA 506 (678)
T ss_pred ---------------------------------CceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhh
Confidence 234899999987 89999874 4579999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--CCCCCCc
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEK 615 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~s~k 615 (1196)
++|||||||+.|||+.+++.|||+|||++.....-...+ ......|...|||||++.. ...|++.
T Consensus 507 K~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~-------------q~~qp~gsilwmAPEvIRmqd~nPfS~q 573 (678)
T KOG0193|consen 507 KNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQ-------------QLEQPHGSLLWMAPEVIRMQDDNPFSFQ 573 (678)
T ss_pred hhhhhhhccccceEEccCCcEEEecccceeeeeeecccc-------------ccCCCccchhhhcHHHHhhcccCCCCcc
Confidence 999999999999999999999999999997643221111 1122357889999999764 2458999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC---CccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP---PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p---~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
+|||||||++|||++ ||......++....-+ ....| .....+..++++|+..||..++++||.+.+||.
T Consensus 574 SDVYaFGiV~YELltg~lPysi~~~dqIifmVGr-G~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 574 SDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGR-GYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred cchhhhhHHHHHHHhCcCCcCCCChhheEEEecc-cccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 999999999999997 8884444444332222 21112 222334458999999999999999999999986
|
|
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=331.34 Aligned_cols=255 Identities=28% Similarity=0.472 Sum_probs=207.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC---chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~---~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
++|.+.+.||.|++|.||+|.+..+++.||+|.+...... ......+.+|+.+++.++||||+++++++.+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------ 75 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRD------ 75 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEcc------
Confidence 5788999999999999999999999999999998754322 1234568899999999999999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|++|||++ ++|.+++.....+++..++.++.|++.||+|||
T Consensus 76 ----------------------------------~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH 121 (263)
T cd06625 76 ----------------------------------DETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLH 121 (263)
T ss_pred ----------------------------------CCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 347899999997 489999988888999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
+.||+||||||+||+++.++.++|+|||+++........ ........|++.|+|||++.+ ..++.++
T Consensus 122 ~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 188 (263)
T cd06625 122 SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSS------------GTGMKSVTGTPYWMSPEVISG-EGYGRKA 188 (263)
T ss_pred hCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccc------------cccccCCCcCccccCcceecc-CCCCchh
Confidence 999999999999999999999999999998754321100 000123468899999999988 5689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
||||||+++|||++ ||.............. ....+......++.+.++|++||..+|.+|||+.++++|+||
T Consensus 189 Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 189 DVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT-QPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred hhHHHHHHHHHHHhCCCCccccchHHHHHHHhc-cCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 99999999999997 7765544433333222 222233333456789999999999999999999999999996
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-37 Score=337.79 Aligned_cols=264 Identities=25% Similarity=0.391 Sum_probs=223.7
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~ 454 (1196)
.....+|..+.+||+|+||+|.+|..+.+.+.||||+++..-.- ....+--+.|-++|+.. +-|.+++++.||
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScF----- 419 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCF----- 419 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHh-----
Confidence 34467999999999999999999999999999999998753211 11233345677777766 567888888776
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
+....+|+||||+. |+|...+++.++|.++.+..|+.+|+-||-
T Consensus 420 -----------------------------------QTmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLF 464 (683)
T KOG0696|consen 420 -----------------------------------QTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLF 464 (683)
T ss_pred -----------------------------------hhhhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhh
Confidence 34578999999996 599999999999999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++|||+||||.+|||++.+|++||+|||+++.--.. ..++.++||||.|+|||++.. ..|+
T Consensus 465 FLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~---------------~~TTkTFCGTPdYiAPEIi~Y-qPYg 528 (683)
T KOG0696|consen 465 FLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD---------------GVTTKTFCGTPDYIAPEIIAY-QPYG 528 (683)
T ss_pred hhhcCCeeeeeccccceEeccCCceEeeecccccccccC---------------CcceeeecCCCcccccceEEe-cccc
Confidence 999999999999999999999999999999999742111 123567899999999999987 5799
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHh
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQ 685 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~ 685 (1196)
.++|||||||+||||+. ||.+.++.+....+...+..+|.+++ .++.++++.+|.+.|.+|.. -.+|-.
T Consensus 529 ksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslS---kEAv~ickg~ltK~P~kRLGcg~~ge~di~~ 605 (683)
T KOG0696|consen 529 KSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLS---KEAVAICKGLLTKHPGKRLGCGPEGERDIRE 605 (683)
T ss_pred cchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCccccc---HHHHHHHHHHhhcCCccccCCCCccccchhh
Confidence 99999999999999995 99999999999888888877777654 49999999999999999974 467899
Q ss_pred ccCCCCchHHHHHH
Q 000993 686 DALPPQMEYELLDN 699 (1196)
Q Consensus 686 ~~~~~~~~~~~~~~ 699 (1196)
|+||+.+.|+-+..
T Consensus 606 H~FFR~iDWek~E~ 619 (683)
T KOG0696|consen 606 HPFFRRIDWEKLER 619 (683)
T ss_pred CcchhhccHHHHhh
Confidence 99999999886644
|
|
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=328.22 Aligned_cols=250 Identities=31% Similarity=0.582 Sum_probs=208.4
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||+|+||.||+|.++.+++.|++|.+............+.+|+.+++.++||||+++++++.+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------- 70 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLD---------- 70 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeecc----------
Confidence 5888999999999999999999999999999998665555567789999999999999999999988732
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....|++|||++ ++|.+++... ..+++..++.++.||+.||.|||++
T Consensus 71 ------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~ 120 (256)
T cd08529 71 ------------------------------KGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK 120 (256)
T ss_pred ------------------------------CCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 356899999996 5999998764 5689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|++||||||+||+++.++.+||+|||+++.+.... .......|++.|+|||++.+ ..++.++|+
T Consensus 121 ~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di 184 (256)
T cd08529 121 KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT---------------NFANTIVGTPYYLSPELCED-KPYNEKSDV 184 (256)
T ss_pred CcccCCCCcceEEEeCCCCEEEcccccceeccCcc---------------chhhccccCccccCHHHhcC-CCCCCccch
Confidence 99999999999999999999999999987653221 01123468899999999987 568899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|||||++|+|++ ||.............. ...++.....++++.++|.+||+.+|++||++.++++|+|.
T Consensus 185 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 185 WALGVVLYECCTGKHPFDANNQGALILKIIR--GVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc--CCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 999999999996 7776654444333332 23333333556789999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=327.79 Aligned_cols=251 Identities=28% Similarity=0.519 Sum_probs=205.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||+|++|.||++.++.+++.||+|++............+.+|+.+++.++||||+++++.+..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---------- 70 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEG---------- 70 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecC----------
Confidence 5899999999999999999999999999999997655554556678899999999999999999876521
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....+|++|||++ ++|.+++... ..+++.+++.++.|++.||+|||++
T Consensus 71 -----------------------------~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~ 121 (257)
T cd08223 71 -----------------------------EDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK 121 (257)
T ss_pred -----------------------------CCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1346899999997 5899888753 4589999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|++||||||+||+++.++.++|+|||++....... .......|++.|+|||++.+ ..++.++|+
T Consensus 122 ~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv 185 (257)
T cd08223 122 HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC---------------DMASTLIGTPYYMSPELFSN-KPYNYKSDV 185 (257)
T ss_pred CeeccCCCchhEEEecCCcEEEecccceEEecccC---------------CccccccCCcCccChhHhcC-CCCCchhhh
Confidence 99999999999999999999999999997653211 01123468999999999987 568899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|||||++|+|++ ||............. ....++.....++.+.+++.+||+.||.+||++.++++|+|+
T Consensus 186 ~slG~il~~l~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 186 WALGCCVYEMATLKHAFNAKDMNSLVYRII--EGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred HHHHHHHHHHHcCCCCCCCCCHHHHHHHHH--hcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 999999999997 665544333332222 223333334566789999999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=334.30 Aligned_cols=254 Identities=27% Similarity=0.441 Sum_probs=201.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||+|+||.||+|+++.+|+.||+|++..........+.+.+|+.+++.++||||++++++|..
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--------- 71 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRR--------- 71 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEee---------
Confidence 47899999999999999999999999999999987544333344567899999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+|++|||+++ .|..++.....+++..++.++.||+.||+|||++|
T Consensus 72 -------------------------------~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~ 120 (286)
T cd07847 72 -------------------------------KRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHN 120 (286)
T ss_pred -------------------------------CCEEEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3568999999987 45555556667999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
++||||||+||+++.++.+||+|||++..+..... ......++..|+|||++.+...++.++|||
T Consensus 121 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~---------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~ 185 (286)
T cd07847 121 CIHRDVKPENILITKQGQIKLCDFGFARILTGPGD---------------DYTDYVATRWYRAPELLVGDTQYGPPVDVW 185 (286)
T ss_pred ceecCCChhhEEEcCCCcEEECccccceecCCCcc---------------cccCcccccccCCHHHHhCCCCcCchhhhH
Confidence 99999999999999999999999999986532210 112345788999999987755688999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcC-------------------CCCC---------ccccCCHHHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKG-------------------ELPP---------SWVAKFSEQESLLRR 668 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~-------------------~~p~---------~~~~~~~~l~~LI~~ 668 (1196)
||||++|||++ ||......+.......... ..|. .+...+..+.+||.+
T Consensus 186 slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 265 (286)
T cd07847 186 AIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKG 265 (286)
T ss_pred HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHH
Confidence 99999999997 6765443322221111000 0010 112345678999999
Q ss_pred cccCCCCCCCCHHHHHhccCC
Q 000993 669 LMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~ 689 (1196)
||+.||++||++.+++.|+||
T Consensus 266 ~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 266 CLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred HhcCCccccCCHHHHhcCCCC
Confidence 999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=337.02 Aligned_cols=270 Identities=23% Similarity=0.386 Sum_probs=206.5
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
...+++|++.+.||+|+||.||+|.++.+++.||||++............+.+|+.+++.++||||+++++++......
T Consensus 8 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~- 86 (310)
T cd07865 8 CDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATP- 86 (310)
T ss_pred cchhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEeccccc-
Confidence 4456889999999999999999999999999999999875443333344567899999999999999999887442100
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yL 535 (1196)
........|+||||++++|.+.+.... .+++.+++.++.||+.||+||
T Consensus 87 -------------------------------~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~l 135 (310)
T cd07865 87 -------------------------------YNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYI 135 (310)
T ss_pred -------------------------------ccCCCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH
Confidence 012245689999999999988887553 689999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++|++|+||||+||+++.++.+||+|||++.......... ........++..|+|||.+.+...++.+
T Consensus 136 H~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~-----------~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 204 (310)
T cd07865 136 HRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSK-----------PNRYTNRVVTLWYRPPELLLGERDYGPP 204 (310)
T ss_pred HHCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccC-----------CCCccCcccCccccCcHHhcCCcccCch
Confidence 99999999999999999999999999999998653221110 0112334678999999998775557899
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCc-----------------------------cccCCHHHH
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPS-----------------------------WVAKFSEQE 663 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~-----------------------------~~~~~~~l~ 663 (1196)
+||||||+++|||++ ||................+..++. .....+.+.
T Consensus 205 ~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 284 (310)
T cd07865 205 IDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHAL 284 (310)
T ss_pred hhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHH
Confidence 999999999999996 565443322211111111111110 001235678
Q ss_pred HHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 664 SLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 664 ~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
+||.+||..||.+|||++++++|+||
T Consensus 285 dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 285 DLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred HHHHHHhcCChhhccCHHHHhcCCCC
Confidence 99999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=339.61 Aligned_cols=262 Identities=27% Similarity=0.422 Sum_probs=208.1
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
+.+++|++.+.||.|+||.||+|.++.+|+.||+|+++...........+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 78 (309)
T cd07845 4 RSVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGK----- 78 (309)
T ss_pred ccccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecC-----
Confidence 346899999999999999999999999999999999976543333334567899999999999999999887431
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....+|+||||++++|.+++.. ...+++.+++.++.||+.||+|||
T Consensus 79 ---------------------------------~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH 125 (309)
T cd07845 79 ---------------------------------HLDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLH 125 (309)
T ss_pred ---------------------------------CCCeEEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence 1246799999999999888875 366999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++|++||||||+||+++.++.+||+|||++....... ...+...+++.|+|||++.+...++.++
T Consensus 126 ~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~ 190 (309)
T cd07845 126 ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA---------------KPMTPKVVTLWYRAPELLLGCTTYTTAI 190 (309)
T ss_pred hCCeecCCCCHHHEEECCCCCEEECccceeeecCCcc---------------CCCCcccccccccChhhhcCCCCcCchH
Confidence 9999999999999999999999999999997653211 0112335688999999987756689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcC-------------------CCCCc--------cccCCHHHHHHH
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG-------------------ELPPS--------WVAKFSEQESLL 666 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~-------------------~~p~~--------~~~~~~~l~~LI 666 (1196)
|||||||++|||++ ||......+.........+ ..+.. ....++.+.++|
T Consensus 191 DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 270 (309)
T cd07845 191 DMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLL 270 (309)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHH
Confidence 99999999999996 6665544443322221110 00000 112356788999
Q ss_pred HHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 667 RRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 667 ~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
.+||+.||.+|||+.++++|+||...
T Consensus 271 ~~ml~~dp~~R~t~~~il~h~~f~~~ 296 (309)
T cd07845 271 NFLLMYDPKKRATAEEALESSYFKEK 296 (309)
T ss_pred HHHhcCChhhCcCHHHHhcChhhccC
Confidence 99999999999999999999999764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=335.17 Aligned_cols=253 Identities=28% Similarity=0.478 Sum_probs=201.4
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|+.++.||.|++|.||+|+++.+|+.||||+++...........+.+|+.+++.++||||+++++++.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~----------- 69 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH----------- 69 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcc-----------
Confidence 588999999999999999999999999999998755444344467889999999999999999998762
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~--~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
+....|++|||++++|..++.. ...+++..++.++.||+.||+|||+++
T Consensus 70 -----------------------------~~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~ 120 (284)
T cd07860 70 -----------------------------TENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR 120 (284)
T ss_pred -----------------------------cCCcEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 2346799999999899888865 356899999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
++||||+|+||+++.++.+||+|||+++...... .......+++.|+|||++.+...++.++|||
T Consensus 121 i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 185 (284)
T cd07860 121 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---------------RTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 185 (284)
T ss_pred eecCCCCHHHEEECCCCCEEEeeccchhhcccCc---------------cccccccccccccCCeEEecCCCCCcHHHHH
Confidence 9999999999999999999999999987543211 0112335788999999987755578899999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC------------------CC--------CccccCCHHHHHHHHHcc
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGE------------------LP--------PSWVAKFSEQESLLRRLM 670 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~------------------~p--------~~~~~~~~~l~~LI~~cL 670 (1196)
||||++|||+| ||.................. .+ ......+++++++|.+||
T Consensus 186 slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 265 (284)
T cd07860 186 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQML 265 (284)
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhc
Confidence 99999999997 66544332222221111000 00 001234567889999999
Q ss_pred cCCCCCCCCHHHHHhccCC
Q 000993 671 SPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~~~~ 689 (1196)
+.||.+|||+.++++|+||
T Consensus 266 ~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 266 HYDPNKRISAKAALAHPFF 284 (284)
T ss_pred CCCcccCCCHHHHhcCCCC
Confidence 9999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-37 Score=341.35 Aligned_cols=259 Identities=28% Similarity=0.435 Sum_probs=215.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCch-hHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~-~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.+.|...++||+||||.||-|+.+.||+.||+|++.++..... -....++|-.+|..++.|.||.+--+|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAf--------- 254 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAF--------- 254 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeee---------
Confidence 4678899999999999999999999999999999865442222 234567899999999999999987665
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yL 535 (1196)
+....+++||..|+ |+|.-+|-..+ .|+++.++.|+.+|+.||++|
T Consensus 255 -------------------------------eTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehl 303 (591)
T KOG0986|consen 255 -------------------------------ETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHL 303 (591)
T ss_pred -------------------------------cCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHH
Confidence 24678999999996 58988776554 799999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|..+||+|||||+|||+|+.||++|+|.|+|..+...+ ..++++||.+|||||++++ ..|+..
T Consensus 304 H~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~----------------~~~~rvGT~GYMAPEvl~n-e~Y~~s 366 (591)
T KOG0986|consen 304 HRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGK----------------PIRGRVGTVGYMAPEVLQN-EVYDFS 366 (591)
T ss_pred HhcceeeccCChhheeeccCCCeEeeccceEEecCCCC----------------ccccccCcccccCHHHHcC-CcccCC
Confidence 99999999999999999999999999999998764332 1345699999999999998 559999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHH----HHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHH
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMER----QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATEL 683 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~----~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~ei 683 (1196)
.|+|||||+||||+. ||....+. ++...++.....++ ...++++++|.+.+|++||.+|. ++.++
T Consensus 367 ~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~---~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~ev 443 (591)
T KOG0986|consen 367 PDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYS---DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEV 443 (591)
T ss_pred ccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcc---cccCHHHHHHHHHHHccCHHHhccCCCcCcchh
Confidence 999999999999994 98765442 33333443333444 34567999999999999999997 57899
Q ss_pred HhccCCCCchHHHHH
Q 000993 684 LQDALPPQMEYELLD 698 (1196)
Q Consensus 684 L~~~~~~~~~~~~~~ 698 (1196)
.+||||+.++|.-+.
T Consensus 444 k~HpfFk~lnw~rle 458 (591)
T KOG0986|consen 444 KEHPFFKDLNWRRLE 458 (591)
T ss_pred hhCcccccCCHhHHh
Confidence 999999999887553
|
|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=360.50 Aligned_cols=254 Identities=26% Similarity=0.373 Sum_probs=207.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC-CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLD-GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~-g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
..|.+.+.||+|+||.||+|....+ ++.||+|.+... .......+.+|+.+|+.++|||||+++++|..
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~-------- 136 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN--DERQAAYARSELHCLAACDHFGIVKHFDDFKS-------- 136 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEE--------
Confidence 4599999999999999999999877 788999976543 23344567889999999999999999998732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|||||||+ |+|.+++.. ..++++..+..++.||+.||+|
T Consensus 137 --------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 184 (478)
T PTZ00267 137 --------------------------------DDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDE 184 (478)
T ss_pred --------------------------------CCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence 457899999996 599887753 3468999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++.+||+|||+++.+..... .......+||+.|+|||++.+ ..++.
T Consensus 185 lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~-~~~~~ 250 (478)
T PTZ00267 185 VHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS-------------LDVASSFCGTPYYLAPELWER-KRYSK 250 (478)
T ss_pred HHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc-------------cccccccCCCccccCHhHhCC-CCCCc
Confidence 9999999999999999999999999999999986532110 011234579999999999987 57899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
++|||||||++|||++ ||......+....... +..++.....++++.++|.+||..||++||++.+++.|+|+..
T Consensus 251 ~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 251 KADMWSLGVILYELLTLHRPFKGPSQREIMQQVLY--GKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred HHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--CCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 9999999999999996 8876655554444433 2223333456678999999999999999999999999987765
Q ss_pred c
Q 000993 692 M 692 (1196)
Q Consensus 692 ~ 692 (1196)
.
T Consensus 329 ~ 329 (478)
T PTZ00267 329 V 329 (478)
T ss_pred H
Confidence 3
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=334.83 Aligned_cols=243 Identities=17% Similarity=0.241 Sum_probs=197.8
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc-hhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 465 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 465 (1196)
..||+|++|.||+|.+ +|+.||||+++...... ...+.+.+|+.+|++++|||||++++++.+..
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~------------ 91 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIV------------ 91 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecc------------
Confidence 5799999999999988 59999999987543322 23467889999999999999999999885410
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh-CCCccc
Q 000993 466 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-QGIIHR 543 (1196)
Q Consensus 466 g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs-~gIiHr 543 (1196)
....+++++||||+ |+|.+++.....+++.....++.|++.||+|||+ .+++||
T Consensus 92 ------------------------~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hr 147 (283)
T PHA02988 92 ------------------------DDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYK 147 (283)
T ss_pred ------------------------cCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 12356899999997 5899999888889999999999999999999998 499999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC-CCCCCcchhHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYSLG 622 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~s~ksDVwSlG 622 (1196)
||||+|||++.++.+||+|||+++..... .....||+.|+|||++.+. ..++.++||||||
T Consensus 148 dlkp~nill~~~~~~kl~dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlG 209 (283)
T PHA02988 148 NLTSVSFLVTENYKLKIICHGLEKILSSP------------------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLG 209 (283)
T ss_pred cCChhhEEECCCCcEEEcccchHhhhccc------------------cccccCcccccCHHHhhhccccccchhhhhHHH
Confidence 99999999999999999999999864311 1234688999999998752 4689999999999
Q ss_pred HHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 623 IVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 623 viLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|++|||++ ||......+......... ..++.....++.+.+||.+||+.||.+|||+.++++.
T Consensus 210 vil~el~~g~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 275 (283)
T PHA02988 210 VVLWEIFTGKIPFENLTTKEIYDLIINKN-NSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYN 275 (283)
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHhcC-CCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 99999997 888766555444433322 2223333567799999999999999999999999864
|
|
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=334.44 Aligned_cols=248 Identities=25% Similarity=0.379 Sum_probs=195.7
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCCCc-hhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCCc
Q 000993 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 467 (1196)
Q Consensus 389 LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 467 (1196)
||+|+||.||+++++.+|+.||+|.+....... .....+..|+.+++.++||||+++++++.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~----------------- 63 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFE----------------- 63 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEe-----------------
Confidence 799999999999999999999999986433221 12344567999999999999999988762
Q ss_pred ccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCcccC
Q 000993 468 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544 (1196)
Q Consensus 468 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrD 544 (1196)
....+|+||||++ ++|.+++... ..+++..++.++.||+.||+|||+.||+|||
T Consensus 64 -----------------------~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d 120 (277)
T cd05607 64 -----------------------SKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRD 120 (277)
T ss_pred -----------------------cCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEcc
Confidence 2456899999996 5898887543 3588999999999999999999999999999
Q ss_pred CCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHH
Q 000993 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 624 (1196)
Q Consensus 545 LKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGvi 624 (1196)
|||+||+++.++.++|+|||++....... ......||+.|+|||++.+ ..++.++|||||||+
T Consensus 121 ikp~Nili~~~~~~~l~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~ 183 (277)
T cd05607 121 MKPENVLLDDQGNCRLSDLGLAVELKDGK----------------TITQRAGTNGYMAPEILKE-EPYSYPVDWFAMGCS 183 (277)
T ss_pred CChHhEEEcCCCCEEEeeceeeeecCCCc----------------eeeccCCCCCccCHHHHcc-CCCCCchhHHHHHHH
Confidence 99999999999999999999987543111 1123468999999999987 459999999999999
Q ss_pred HHHhhc---CCchhHH----HHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH----HHHHhccCCCCch
Q 000993 625 FFELWH---PFSTAME----RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQDALPPQME 693 (1196)
Q Consensus 625 LyELlt---Pf~~~~~----~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta----~eiL~~~~~~~~~ 693 (1196)
+|||++ ||..... .+...... ....+......++++++||++||+.||.+||++ .+++.|+||....
T Consensus 184 l~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~ 261 (277)
T cd05607 184 IYEMVAGRTPFKDHKEKVAKEELKRRTL--EDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTIN 261 (277)
T ss_pred HHHHHhCCCCCCCCcchhhHHHHHHHhh--ccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCC
Confidence 999996 7754322 11111111 112222223467789999999999999999999 6788999998876
Q ss_pred HH
Q 000993 694 YE 695 (1196)
Q Consensus 694 ~~ 695 (1196)
+.
T Consensus 262 ~~ 263 (277)
T cd05607 262 FP 263 (277)
T ss_pred HH
Confidence 54
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=350.52 Aligned_cols=257 Identities=25% Similarity=0.344 Sum_probs=201.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~--~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
..+|++++.||+|+||.||+|... .++..||+|.+... ....+|+.+|+.++|||||+++++|..
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~iv~~~~~~~~------ 157 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAIINLIHAYRW------ 157 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCccceeeeEee------
Confidence 458999999999999999999864 34678999987532 235689999999999999999987732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|++||++.++|.+++.....+++..++.++.||+.||+|||+
T Consensus 158 ----------------------------------~~~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~ 203 (392)
T PHA03207 158 ----------------------------------KSTVCMVMPKYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHG 203 (392)
T ss_pred ----------------------------------CCEEEEEehhcCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999999999999777889999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++.+||+|||+++.+..... ........||+.|+|||++.+ ..|+.++|
T Consensus 204 ~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~D 269 (392)
T PHA03207 204 RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD-------------TPQCYGWSGTLETNSPELLAL-DPYCAKTD 269 (392)
T ss_pred CCccccCCCHHHEEEcCCCCEEEccCccccccCcccc-------------cccccccccccCccCHhHhcC-CCCCchhh
Confidence 9999999999999999999999999999976432210 011234579999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHH---HHHHHHHhhhcC-------------------------C----CCCcc--ccCCH
Q 000993 618 MYSLGIVFFELWH---PFSTAME---RQIVLSDLKQKG-------------------------E----LPPSW--VAKFS 660 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~---~~~~~~~l~~~~-------------------------~----~p~~~--~~~~~ 660 (1196)
||||||++|||++ ||..... ......++...+ . .|... .....
T Consensus 270 vwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (392)
T PHA03207 270 IWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHM 349 (392)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcch
Confidence 9999999999986 6653321 111111110000 0 01000 12245
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHhccCCCCchHHHH
Q 000993 661 EQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELL 697 (1196)
Q Consensus 661 ~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~~~~ 697 (1196)
+++++|++||..||.+|||+.++|+||||.....+.+
T Consensus 350 ~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~~~~ 386 (392)
T PHA03207 350 DVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPINLL 386 (392)
T ss_pred hHHHHHHHHhccChhhCCCHHHHhhCchhhccchhhh
Confidence 7889999999999999999999999999988776644
|
|
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-37 Score=351.19 Aligned_cols=248 Identities=29% Similarity=0.424 Sum_probs=209.4
Q ss_pred eeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCCc
Q 000993 388 PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 467 (1196)
Q Consensus 388 ~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 467 (1196)
+||+|.||+||.|+++.+...+|||-|..+ ..+..+-+.+|+.+.+.|+|.|||+|+|++-+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpek--dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~se---------------- 643 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEK--DSREVQPLHEEIALHSTLRHKNIVRYLGSVSE---------------- 643 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccc--cchhhccHHHHHHHHHHHhhHhHHHHhhccCC----------------
Confidence 699999999999999999999999988643 34556678899999999999999999998732
Q ss_pred ccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCC--CHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 468 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHF--DKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 468 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l--~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
..++-|.||-++ |+|.++++. -+++ .+..+-.|.+||++||.|||.+.||||
T Consensus 644 ------------------------nGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHR 699 (1226)
T KOG4279|consen 644 ------------------------NGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHR 699 (1226)
T ss_pred ------------------------CCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeec
Confidence 346789999997 599999974 4777 788888999999999999999999999
Q ss_pred CCCcCcEEecC-CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc-CCCCCCCcchhHHH
Q 000993 544 DLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ-GWPKIDEKADMYSL 621 (1196)
Q Consensus 544 DLKp~NILld~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-~~~~~s~ksDVwSl 621 (1196)
|||-+|+||+. .|.+||+|||.++.+..- ...+.++.||..|||||++. |...|+.++|||||
T Consensus 700 DIKGDNVLvNTySGvlKISDFGTsKRLAgi---------------nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~ 764 (1226)
T KOG4279|consen 700 DIKGDNVLVNTYSGVLKISDFGTSKRLAGI---------------NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSF 764 (1226)
T ss_pred cccCCcEEEeeccceEEecccccchhhccC---------------CccccccccchhhhChHhhccCCcCCCchhhhhhc
Confidence 99999999975 689999999999976421 22345678999999999985 44569999999999
Q ss_pred HHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 622 GIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 622 GviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||++.||.| ||......+..+-.+-.-...|+.+...+.+++++|.+|+.+||.+||++.++|++||.+..
T Consensus 765 GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 765 GCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred cceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 999999998 88776666555544444444566667777899999999999999999999999999987754
|
|
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=337.83 Aligned_cols=249 Identities=27% Similarity=0.434 Sum_probs=188.0
Q ss_pred eeeccCCcEEEEEEEEcc--CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKL--DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~--~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
.+||+|+||+||+|+++. ++..||+|.+..... ...+.+|+.+|+.++||||++++++|...
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~------------ 70 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI----SMSACREIALLRELKHPNVIALQKVFLSH------------ 70 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC----cHHHHHHHHHHHhCCCCCeeeEEEEEecc------------
Confidence 589999999999999764 568899998864322 34578899999999999999999887432
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc---------CCCCHHHHHHHHHHHHHHHHHH
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY---------DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~---------~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
....+|++|||++++|.+++... ..+++..++.++.||+.||+||
T Consensus 71 --------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~l 124 (317)
T cd07867 71 --------------------------SDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYL 124 (317)
T ss_pred --------------------------CCCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHH
Confidence 23568999999999998887521 2488999999999999999999
Q ss_pred HhCCCcccCCCcCcEEe----cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 536 HGQGIIHRDLTPNNIFF----DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILl----d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
|++||+||||||+|||+ +.++.+||+|||+++........ ........||+.|+|||++.+...
T Consensus 125 H~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~------------~~~~~~~~~t~~y~aPE~~~~~~~ 192 (317)
T cd07867 125 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP------------LADLDPVVVTFWYRAPELLLGARH 192 (317)
T ss_pred HhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCccc------------ccccCcceecccccCcHHhcCCCc
Confidence 99999999999999999 45678999999999865322100 011234578999999999987556
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHH---------HHHHHHh--------------hhcCCCC-------------
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMER---------QIVLSDL--------------KQKGELP------------- 652 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~---------~~~~~~l--------------~~~~~~p------------- 652 (1196)
++.++|||||||++|||++ ||....+. ....... ......+
T Consensus 193 ~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (317)
T cd07867 193 YTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYAN 272 (317)
T ss_pred cCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCC
Confidence 8999999999999999997 56422110 0000000 0000000
Q ss_pred --------CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 653 --------PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 653 --------~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
.........+.+||.+||+.||.+|||+.++|+||||
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 273 SSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred chhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 0001123457789999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=341.54 Aligned_cols=265 Identities=19% Similarity=0.278 Sum_probs=201.6
Q ss_pred EEeeeccC--CcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCc
Q 000993 385 ELQPLGHG--GFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 462 (1196)
Q Consensus 385 ~~~~LG~G--~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~ 462 (1196)
++++||+| +||+||++.++.+|+.||+|+++...........+.+|+.+++.++||||++++++|..
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~----------- 70 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIA----------- 70 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEE-----------
Confidence 45789999 78999999999999999999997655444555678889999999999999999988743
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 463 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 463 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+|+|||||+ ++|.+++... ..+++..++.++.||+.||+|||++|
T Consensus 71 -----------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ 121 (327)
T cd08227 71 -----------------------------DNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG 121 (327)
T ss_pred -----------------------------CCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 356799999997 5899988653 45899999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC-CCCCCcchh
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADM 618 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~s~ksDV 618 (1196)
|+||||||+|||++.++.++++||+.+.......... .. .........++..|+|||++.+. ..++.++||
T Consensus 122 iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di 193 (327)
T cd08227 122 YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL--RV------VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDI 193 (327)
T ss_pred EecCCCChhhEEEecCCcEEEcccchhhccccccccc--cc------cccccccccceecccChHHhhcccCCCCchhhH
Confidence 9999999999999999999999998765432111000 00 00001223577889999998753 358999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-------C------------------------------------C
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-------L------------------------------------P 652 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-------~------------------------------------p 652 (1196)
|||||++|||++ ||.................. . .
T Consensus 194 wslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (327)
T cd08227 194 YSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSH 273 (327)
T ss_pred HHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCccc
Confidence 999999999996 77644333322222111000 0 0
Q ss_pred CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchHHHH
Q 000993 653 PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELL 697 (1196)
Q Consensus 653 ~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~~~~ 697 (1196)
+.....++.+.+||++||+.||.+|||+.++++|+||.+......
T Consensus 274 ~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~~~~~ 318 (327)
T cd08227 274 PYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRAS 318 (327)
T ss_pred ccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcchhhh
Confidence 011123467889999999999999999999999999988654433
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-35 Score=334.07 Aligned_cols=274 Identities=23% Similarity=0.361 Sum_probs=213.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++.+.||+|+||.||++.++.+++.||+|.+..... .......+.+|+.+++.++||||+++++.+.
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------- 71 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFE--------- 71 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEe---------
Confidence 479999999999999999999999999999999875432 2233457889999999999999999998763
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...++|+||||++| +|.+++.....+++..++.++.|++.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 120 (305)
T cd05609 72 -------------------------------TKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNY 120 (305)
T ss_pred -------------------------------cCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 24578999999975 9999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|++||||||+||+++.++.+||+|||+++............................|+..|+|||.+.+ ..++.++|+
T Consensus 121 ~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di 199 (305)
T cd05609 121 GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR-QGYGKPVDW 199 (305)
T ss_pred CccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccC-CCCCchhhH
Confidence 9999999999999999999999999998742111100000000000000111123468899999999877 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC---HHHHHhccCCCCc
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS---ATELLQDALPPQM 692 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt---a~eiL~~~~~~~~ 692 (1196)
|||||++|||++ ||......+............|......++++.++|++||+.||.+||+ +.++++|+||...
T Consensus 200 ~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~ 279 (305)
T cd05609 200 WAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL 279 (305)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence 999999999997 7776555444444333333333333356678999999999999999998 7999999999876
Q ss_pred hHH
Q 000993 693 EYE 695 (1196)
Q Consensus 693 ~~~ 695 (1196)
.+.
T Consensus 280 ~~~ 282 (305)
T cd05609 280 DWN 282 (305)
T ss_pred CHH
Confidence 654
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=332.82 Aligned_cols=255 Identities=29% Similarity=0.463 Sum_probs=212.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|.+.+.||+|+||.||+|.+..+++.||+|++..... .......+.+|+++++.++||||+++++++.+
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 72 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQD-------- 72 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEc--------
Confidence 478999999999999999999999999999999874332 22345678899999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|++|||++ ++|.+++.....+++..+..++.||+.||+|||++
T Consensus 73 --------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~ 120 (290)
T cd05580 73 --------------------------------DSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSL 120 (290)
T ss_pred --------------------------------CCeEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 457899999995 69999998888999999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|++||||+|+|||++.++.+||+|||+++..... .....|++.|+|||.+.+ ..++.++||
T Consensus 121 ~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~-~~~~~~~Di 181 (290)
T cd05580 121 DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR------------------TYTLCGTPEYLAPEIILS-KGYGKAVDW 181 (290)
T ss_pred CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC------------------CCCCCCCccccChhhhcC-CCCCccccH
Confidence 9999999999999999999999999998764211 123468999999999887 467899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccCCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPP 690 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~~~ 690 (1196)
||||+++|+|++ ||..................+|. ..++.++++|++||..||.+|+ +++++++|+||.
T Consensus 182 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~ 258 (290)
T cd05580 182 WALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPS---FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFA 258 (290)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCc---cCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccc
Confidence 999999999997 77655544333333332323333 3357899999999999999999 999999999998
Q ss_pred CchHHHH
Q 000993 691 QMEYELL 697 (1196)
Q Consensus 691 ~~~~~~~ 697 (1196)
...+...
T Consensus 259 ~~~~~~~ 265 (290)
T cd05580 259 GIDWIAL 265 (290)
T ss_pred cCCHHHH
Confidence 8775533
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=331.03 Aligned_cols=250 Identities=24% Similarity=0.443 Sum_probs=202.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|.+.+.||+|+||.||+|++..+++.||+|+++.... .....+.+|+.+++.++||||+++++++..
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~--------- 77 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG--EDFAVVQQEIIMMKDCKHSNIVAYFGSYLR--------- 77 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCeeeEEEEEEe---------
Confidence 688999999999999999999999999999999875432 234567889999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+|++||||+ ++|.+++...+.+++.+++.++.||+.||+|||++|
T Consensus 78 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 126 (267)
T cd06645 78 -------------------------------RDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKG 126 (267)
T ss_pred -------------------------------CCEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 356799999997 599999988889999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--CCCCCCcch
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKAD 617 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~s~ksD 617 (1196)
++|+||||+||+++.++.+||+|||++....... .......|++.|+|||++.. ...++.++|
T Consensus 127 i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~D 191 (267)
T cd06645 127 KMHRDIKGANILLTDNGHVKLADFGVSAQITATI---------------AKRKSFIGTPYWMAPEVAAVERKGGYNQLCD 191 (267)
T ss_pred eecCCCCHHHEEECCCCCEEECcceeeeEccCcc---------------cccccccCcccccChhhhccccCCCCCchhh
Confidence 9999999999999999999999999987542110 11234578999999998742 245789999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCc---cccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPS---WVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~---~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
+|||||++|+|++ ||....+........... ..++. ....+..+.++|++||+.+|.+||+++++++|+|
T Consensus 192 vwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 192 IWAVGITAIELAELQPPMFDLHPMRALFLMTKSN-FQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred hHHHHHHHHHHhcCCCCcccccchhhHHhhhccC-CCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 9999999999986 665444333222222111 11221 1234567899999999999999999999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=355.44 Aligned_cols=249 Identities=27% Similarity=0.347 Sum_probs=195.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
...|.+.+.||+|+||.||+|.+..+++.||||... ...+.+|+.+|+.++|||||++++++..
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~--------~~~~~~E~~iL~~L~HpnIv~l~~~~~~-------- 231 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW--------YASSVHEARLLRRLSHPAVLALLDVRVV-------- 231 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc--------ccCHHHHHHHHHHCCCCCCCcEEEEEEE--------
Confidence 457999999999999999999999999999999642 1235689999999999999999988743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....|++||++.++|.+++... ..+++.+++.++.||+.||+|||++
T Consensus 232 --------------------------------~~~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~ 279 (461)
T PHA03211 232 --------------------------------GGLTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGE 279 (461)
T ss_pred --------------------------------CCEEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3457899999999999888654 4699999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+||||+.++.+||+|||+++....... .......+||+.|+|||++.+ ..++.++||
T Consensus 280 gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~-------------~~~~~~~~GT~~Y~APE~~~~-~~~~~~sDv 345 (461)
T PHA03211 280 GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS-------------TPFHYGIAGTVDTNAPEVLAG-DPYTPSVDI 345 (461)
T ss_pred CEEECcCCHHHEEECCCCCEEEcccCCceecccccc-------------cccccccCCCcCCcCHHHHcC-CCCCchHHH
Confidence 999999999999999999999999999976432110 011234579999999999988 568999999
Q ss_pred HHHHHHHHHhhc---C-Cchh-------HHHHHHHHHhhhcC----CCC-------------------------Cccc--
Q 000993 619 YSLGIVFFELWH---P-FSTA-------MERQIVLSDLKQKG----ELP-------------------------PSWV-- 656 (1196)
Q Consensus 619 wSlGviLyELlt---P-f~~~-------~~~~~~~~~l~~~~----~~p-------------------------~~~~-- 656 (1196)
|||||+||||++ | |... ...+ ...++.... .++ +.|.
T Consensus 346 wSlGviL~El~~g~~~lf~~~~~~~~~~~~~~-l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 424 (461)
T PHA03211 346 WSAGLVIFEAAVHTASLFSASRGDERRPYDAQ-ILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRY 424 (461)
T ss_pred HHHHHHHHHHHHcCCCcccCCcccccCCcHHH-HHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhh
Confidence 999999999974 2 2111 1111 111111100 000 1111
Q ss_pred -cCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 657 -AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 657 -~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
...+.+.+||.+||+.||.+|||+.|+|+|+||+.
T Consensus 425 ~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 425 YKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred ccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 23347889999999999999999999999999975
|
|
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-35 Score=326.05 Aligned_cols=257 Identities=26% Similarity=0.427 Sum_probs=208.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||.|+||+||+|.+..++..+|+|++....... ....+.+|+.+++.++||||+++++.+..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------- 70 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVV--------- 70 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEee---------
Confidence 47999999999999999999999899999999987544433 56789999999999999999999987632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY---DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~---~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....|++|||+++ +|.+++... ..+++..++.++.||+.||+|||
T Consensus 71 -------------------------------~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh 119 (267)
T cd06610 71 -------------------------------GDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH 119 (267)
T ss_pred -------------------------------CCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3567999999974 899998764 45899999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++|++||||||+||++++++.++|+|||++..+....... ........|++.|+|||++.....++.++
T Consensus 120 ~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~-----------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~ 188 (267)
T cd06610 120 SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRT-----------RKVRKTFVGTPCWMAPEVMEQVHGYDFKA 188 (267)
T ss_pred hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccc-----------ccccccccCChhhcChHHHccccCcCccc
Confidence 9999999999999999999999999999998764322110 00123346899999999988744689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-CCCc--cccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LPPS--WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-~p~~--~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|+|||||++|+|++ ||.................. .+.. +...++.+.+++.+||..||.+||++.++++||||
T Consensus 189 Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 189 DIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred chHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 99999999999997 77665554444443332211 1111 12456788999999999999999999999999997
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=335.83 Aligned_cols=258 Identities=29% Similarity=0.431 Sum_probs=204.7
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++.+.||.|+||.||+|.++.+++.+|+|.++...........+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~------ 76 (293)
T cd07843 3 SVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGS------ 76 (293)
T ss_pred chhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEec------
Confidence 35789999999999999999999999999999999986554434445678899999999999999999887431
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....+|++|||++++|.+++.... .+++..++.++.||+.||+|||+
T Consensus 77 --------------------------------~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~ 124 (293)
T cd07843 77 --------------------------------NLDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHD 124 (293)
T ss_pred --------------------------------CCCcEEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 125789999999999999887644 59999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+|++||||||+||+++.++.+||+|||+++...... .......+++.|+|||++.+...++.++|
T Consensus 125 ~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~D 189 (293)
T cd07843 125 NWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL---------------KPYTQLVVTLWYRAPELLLGAKEYSTAID 189 (293)
T ss_pred CCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc---------------cccccccccccccCchhhcCCccccchhh
Confidence 999999999999999999999999999997653221 01123457889999999887555789999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcC---------------------------CCCCcccc--CCHHHHHH
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG---------------------------ELPPSWVA--KFSEQESL 665 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~---------------------------~~p~~~~~--~~~~l~~L 665 (1196)
+||||+++|+|++ ||................+ .....+.. .++.+.++
T Consensus 190 i~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (293)
T cd07843 190 MWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDL 269 (293)
T ss_pred HHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHH
Confidence 9999999999997 5654433222221111000 00011111 25678899
Q ss_pred HHHcccCCCCCCCCHHHHHhccCC
Q 000993 666 LRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 666 I~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|++||+.||++|||+.++++|+||
T Consensus 270 i~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 270 LNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred HHHHhccCccccCCHHHHhcCCCC
Confidence 999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-35 Score=326.71 Aligned_cols=257 Identities=23% Similarity=0.396 Sum_probs=206.0
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC----chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS----LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~----~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
+|.+.+.||.|+||+||+|... +|+.+|+|.+...... ......+.+|+.+++.++||||++++++|.+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------ 73 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLD------ 73 (265)
T ss_pred CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeec------
Confidence 4778899999999999999874 8899999998754322 2233568899999999999999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|++|||+++ +|.+++.+...+++..++.++.||+.||+|||
T Consensus 74 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH 119 (265)
T cd06631 74 ----------------------------------DNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLH 119 (265)
T ss_pred ----------------------------------CCeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3578999999975 99999988788999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
+.+|+|+||||+||+++.++.++|+|||+++......... ..........|++.|+|||++.+ ..++.++
T Consensus 120 ~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~ 189 (265)
T cd06631 120 NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHG---------THSNMLKSMHGTPYWMAPEVINE-SGYGRKS 189 (265)
T ss_pred hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccc---------cccccccccCCCccccChhhhcC-CCCcchh
Confidence 9999999999999999999999999999998653211100 00111234568999999999987 5688999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|+|||||++|+|++ ||...................++.....+.++.++|++||+.+|.+||++.++++|+|+
T Consensus 190 Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 190 DIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred hHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 99999999999997 77654443333333222233344444566789999999999999999999999999996
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-35 Score=331.51 Aligned_cols=256 Identities=25% Similarity=0.377 Sum_probs=200.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHH-HHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVAT-LSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~i-L~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++++.||+|+||.||+|+++.+|+.||+|+++...... ...++..|+.. ++.++||||+++++++..
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~-------- 71 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ-EQKRLLMDLDISMRSVDCPYTVTFYGALFR-------- 71 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH-HHHHHHHHHHHHHHHcCCCCeeeeeEEEec--------
Confidence 47999999999999999999999999999999987543332 33455666664 666799999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES----YDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~----~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|++|||++++|.+++.. ...+++..++.++.||+.||+||
T Consensus 72 --------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~l 119 (283)
T cd06617 72 --------------------------------EGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYL 119 (283)
T ss_pred --------------------------------CCcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 345799999999998887754 24689999999999999999999
Q ss_pred HhC-CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC---CC
Q 000993 536 HGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW---PK 611 (1196)
Q Consensus 536 Hs~-gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~ 611 (1196)
|++ +++||||||+||+++.++.+||+|||+++...... ..+...|+..|+|||.+.+. ..
T Consensus 120 H~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~ 183 (283)
T cd06617 120 HSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV----------------AKTIDAGCKPYMAPERINPELNQKG 183 (283)
T ss_pred hhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccc----------------ccccccCCccccChhhcCCcccccc
Confidence 998 99999999999999999999999999987542110 11234688999999988652 24
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHH-HHHHHHhhhcCCCCCc-cccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMER-QIVLSDLKQKGELPPS-WVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~-~~~~~~l~~~~~~p~~-~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++.++|+|||||++|+|++ ||...... +....... ...+.. ....+.++.++|.+||..+|.+||++.++++|
T Consensus 184 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 184 YDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVE--EPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred cCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHh--cCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 6889999999999999996 76543221 22222211 111111 12356789999999999999999999999999
Q ss_pred cCCCCchHH
Q 000993 687 ALPPQMEYE 695 (1196)
Q Consensus 687 ~~~~~~~~~ 695 (1196)
+|+.....+
T Consensus 262 ~~~~~~~~~ 270 (283)
T cd06617 262 PFFELHLSK 270 (283)
T ss_pred chhhhcccc
Confidence 999876543
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=336.15 Aligned_cols=252 Identities=26% Similarity=0.423 Sum_probs=203.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||+|+||.||++.+..++..||+|.+.... ......++.+|+++++.++||||++++++|..
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--------- 70 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI-KPAIRNQIIRELKVLHECNSPYIVGFYGAFYS--------- 70 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee---------
Confidence 47999999999999999999999999999999987432 33345678899999999999999999998843
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh-C
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-Q 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs-~ 538 (1196)
...+|++|||++ ++|.+++.....+++..+..++.||+.||.|||+ +
T Consensus 71 -------------------------------~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 119 (308)
T cd06615 71 -------------------------------DGEISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKH 119 (308)
T ss_pred -------------------------------CCEEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhC
Confidence 356899999997 5999999888889999999999999999999998 5
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
+++||||||+|||++.++.+||+|||++...... ......|++.|+|||++.+ ..++.++|+
T Consensus 120 ~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-----------------~~~~~~~~~~~~aPE~~~~-~~~~~~~Di 181 (308)
T cd06615 120 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----------------MANSFVGTRSYMSPERLQG-THYTVQSDI 181 (308)
T ss_pred CEEECCCChHHEEEecCCcEEEccCCCccccccc-----------------ccccCCCCcCccChhHhcC-CCCCccchH
Confidence 9999999999999999999999999998653211 1133578999999999887 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhc----------------------------------CCCCCcc--ccCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK----------------------------------GELPPSW--VAKF 659 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~----------------------------------~~~p~~~--~~~~ 659 (1196)
|||||++|+|++ ||......... ...... ...++.. ...+
T Consensus 182 wslG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (308)
T cd06615 182 WSLGLSLVEMAIGRYPIPPPDAKELE-AMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFS 260 (308)
T ss_pred HHHHHHHHHHHhCCCCCCCcchhhHH-HhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccC
Confidence 999999999997 66433322111 100000 0000110 1245
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 660 SEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 660 ~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
+++++||.+||..||++|||+.++++|+|+.+.
T Consensus 261 ~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 261 DEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 678999999999999999999999999999764
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=343.19 Aligned_cols=267 Identities=24% Similarity=0.395 Sum_probs=210.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||.|+||.||+|.++.+|+.||+|++............+.+|+.+|+.++||||++++++|....
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------- 77 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG------- 77 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-------
Confidence 6899999999999999999999999999999998765444445567889999999999999999987763210
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
.....+|+||||++++|.+++.....+++..++.++.||+.||+|||++||
T Consensus 78 -----------------------------~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 128 (334)
T cd07855 78 -----------------------------ADFKDVYVVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANV 128 (334)
T ss_pred -----------------------------CCCceEEEEEehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 124578999999999999999888889999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+||||||+||+++.++.+||+|||++......... .........|+..|+|||.+.+...++.++||||
T Consensus 129 vH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-----------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~s 197 (334)
T cd07855 129 IHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTE-----------HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWS 197 (334)
T ss_pred ecCCCCHHHEEEcCCCcEEecccccceeecccCcC-----------CCcccccccccccccChHHhcCCcccccccchHH
Confidence 99999999999999999999999999764322110 0011133478999999999876556899999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhh-----------------------hcCCCCC-----ccccCCHHHHHHHHHc
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLK-----------------------QKGELPP-----SWVAKFSEQESLLRRL 669 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~-----------------------~~~~~p~-----~~~~~~~~l~~LI~~c 669 (1196)
|||++|||++ ||.............. .....++ .....++++.++|++|
T Consensus 198 lG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 277 (334)
T cd07855 198 VGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQM 277 (334)
T ss_pred HHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHH
Confidence 9999999996 6644322111110000 0000111 1133467899999999
Q ss_pred ccCCCCCCCCHHHHHhccCCCCchH
Q 000993 670 MSPSPSDRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 670 L~~dP~~RPta~eiL~~~~~~~~~~ 694 (1196)
|+.+|.+||++.++++|+|+.+...
T Consensus 278 l~~~P~~Rpt~~~~l~~~~~~~~~~ 302 (334)
T cd07855 278 LQFDPEERITVEQALQHPFLAQYHD 302 (334)
T ss_pred ccCChhhCcCHHHHHhChhhhhccC
Confidence 9999999999999999999987653
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-36 Score=347.98 Aligned_cols=257 Identities=27% Similarity=0.445 Sum_probs=224.4
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
++-...|.+.+.||+|.|++|.+|++..++..||||.|..........+.+.+|+++|+.++|||||+++.+..
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~------ 125 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIE------ 125 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeee------
Confidence 44568899999999999999999999999999999999877666666677999999999999999999998752
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
....+|+||||+. |.+.+++...++..+..++.++.|+++|++||
T Consensus 126 ----------------------------------t~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYc 171 (596)
T KOG0586|consen 126 ----------------------------------TEATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYC 171 (596)
T ss_pred ----------------------------------ecceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHH
Confidence 3568999999995 69999999999999999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|+++|+|||||++||||+.+.++||+|||++.++.... ...+.||++.|+|||++++..+.++.
T Consensus 172 H~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~----------------~lqt~cgsppyAaPEl~~g~~y~gpe 235 (596)
T KOG0586|consen 172 HSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGL----------------MLQTFCGSPPYAAPELFNGKKYDGPE 235 (596)
T ss_pred hhcceeccccchhhcccccccceeeeccccceeecccc----------------cccccCCCCCccChHhhcCcccCCcc
Confidence 99999999999999999999999999999998875332 12467999999999999998777899
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
+|+||+|++||-|++ ||.+..-.+.....+..+..+|... +.++++||+++|-.+|.+|++.+++..|.|..-.
T Consensus 236 ~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~m---s~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~ 312 (596)
T KOG0586|consen 236 VDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYM---SCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDL 312 (596)
T ss_pred eehhhhhhhheeeeecccccCCcccccccchheeeeeccccee---echhHHHHHHhhccCccccCCHHHhhhhcccchh
Confidence 999999999999986 9987666555555556566666443 3489999999999999999999999999987643
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-35 Score=334.56 Aligned_cols=250 Identities=22% Similarity=0.293 Sum_probs=192.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc----------------CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeee
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKL----------------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 444 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~----------------~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~ 444 (1196)
++|.+.++||+|+||.||+|.+.. ++..||+|++... .......++.+|+.+|+.++||||++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPD-ANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCC-CCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 578999999999999999998642 3457999998643 23334567899999999999999999
Q ss_pred eeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC---------
Q 000993 445 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--------- 514 (1196)
Q Consensus 445 l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--------- 514 (1196)
+++++.+ ...+|++||||+ ++|.+++....
T Consensus 84 ~~~~~~~----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 123 (304)
T cd05096 84 LLGVCVD----------------------------------------EDPLCMITEYMENGDLNQFLSSHHLDDKEENGN 123 (304)
T ss_pred EEEEEec----------------------------------------CCceEEEEecCCCCcHHHHHHhccccccccccc
Confidence 9998743 235799999996 59999886432
Q ss_pred ----------CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCC
Q 000993 515 ----------HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDT 584 (1196)
Q Consensus 515 ----------~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~ 584 (1196)
.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 124 ~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~---------- 193 (304)
T cd05096 124 DAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDY---------- 193 (304)
T ss_pred cccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccCce----------
Confidence 367788999999999999999999999999999999999999999999999975432110
Q ss_pred CCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc-----CCchhHHHHHHHHH---hhhc--CCCCCc
Q 000993 585 GGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH-----PFSTAMERQIVLSD---LKQK--GELPPS 654 (1196)
Q Consensus 585 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt-----Pf~~~~~~~~~~~~---l~~~--~~~p~~ 654 (1196)
........++..|||||++.+ ..++.++|||||||++|||++ ||......+..... .... ...+..
T Consensus 194 ---~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (304)
T cd05096 194 ---YRIQGRAVLPIRWMAWECILM-GKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFR 269 (304)
T ss_pred ---eEecCcCCCCccccCHHHHhc-CCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccC
Confidence 011123356789999999877 568999999999999999974 66654433322111 1111 111112
Q ss_pred cccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 655 WVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 655 ~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
....++.+.+||.+||+.||.+|||+.+|.+
T Consensus 270 ~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 270 PPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred CCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 2345678999999999999999999999965
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=332.80 Aligned_cols=260 Identities=28% Similarity=0.440 Sum_probs=202.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++.+.||.|+||.||+|.+..+|+.||+|+++...........+.+|+.+++.++ ||||+++++++....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~------ 74 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEE------ 74 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecC------
Confidence 4789999999999999999999999999999998765443334467889999999995 699999998874321
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-----DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-----~~l~e~~~~~i~~qIa~gL~y 534 (1196)
......+|++|||++++|.+++... ..+++..++.++.||+.||+|
T Consensus 75 -----------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~ 125 (295)
T cd07837 75 -----------------------------KNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAH 125 (295)
T ss_pred -----------------------------CCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 0123457999999999998887643 358999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecC-CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
||++||+||||||+||+++. ++.+||+|||+++.+.... .......+++.|+|||++.+...++
T Consensus 126 LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~ 190 (295)
T cd07837 126 CHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPV---------------KSYTHEIVTLWYRAPEVLLGSTHYS 190 (295)
T ss_pred HHHCCeeecCCChHHEEEecCCCeEEEeecccceecCCCc---------------cccCCcccccCCCChHHhhCCCCCC
Confidence 99999999999999999998 8899999999987542211 0112335788999999987655689
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-----------------CC--------CccccCCHHHHHH
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-----------------LP--------PSWVAKFSEQESL 665 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-----------------~p--------~~~~~~~~~l~~L 665 (1196)
.++|+||||+++|+|++ ||.................. .+ ......++++.++
T Consensus 191 ~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (295)
T cd07837 191 TPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDL 270 (295)
T ss_pred chHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHH
Confidence 99999999999999997 66554433332222111000 00 0112356688999
Q ss_pred HHHcccCCCCCCCCHHHHHhccCCC
Q 000993 666 LRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 666 I~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
|.+||..||.+||++.+++.|+|++
T Consensus 271 i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 271 LQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred HHHHccCChhhcCCHHHHhcCCCcC
Confidence 9999999999999999999999984
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=329.07 Aligned_cols=252 Identities=25% Similarity=0.425 Sum_probs=201.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|+++.+++.||+|++..... .....+.+|+.+++.++||||+++++++..
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~-------- 77 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG--DDFSLIQQEIFMVKECKHCNIVAYFGSYLS-------- 77 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc--chHHHHHHHHHHHHhcCCCCeeeeeEEEEe--------
Confidence 3689999999999999999999999999999999875432 234567889999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+||||++ ++|.+++.....+++..+..++.|++.||+|||++
T Consensus 78 --------------------------------~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 125 (267)
T cd06646 78 --------------------------------REKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSK 125 (267)
T ss_pred --------------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 346799999997 58999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--CCCCCCcc
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 616 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~s~ks 616 (1196)
||+||||||+||+++.++.+||+|||+++...... .......|++.|+|||.+.+ ...++.++
T Consensus 126 ~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~ 190 (267)
T cd06646 126 GKMHRDIKGANILLTDNGDVKLADFGVAAKITATI---------------AKRKSFIGTPYWMAPEVAAVEKNGGYNQLC 190 (267)
T ss_pred CccccCCCHHHEEECCCCCEEECcCccceeecccc---------------cccCccccCccccCHhHcccccCCCCcchh
Confidence 99999999999999999999999999997643111 01233468899999998853 23478899
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC--CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP--PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p--~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
|||||||++|||++ ||...................+ ......+..+.+||++||+.+|.+|||++++++|+|
T Consensus 191 Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 191 DIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred hHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 99999999999986 6654433222211111111111 112234578999999999999999999999999976
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-35 Score=328.45 Aligned_cols=256 Identities=22% Similarity=0.402 Sum_probs=202.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+.|++.+.||+|+||.||+|.++.+++.||+|++..... ....+.+|+.+++.+ +||||++++++|.....
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~----- 77 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP----- 77 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc---cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCC-----
Confidence 467888999999999999999999999999999875432 345688899999998 79999999998854310
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
......+|++|||++ ++|.+++... ..+++..+..++.||+.||+|||
T Consensus 78 -----------------------------~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH 128 (272)
T cd06637 78 -----------------------------PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH 128 (272)
T ss_pred -----------------------------CCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 012356899999997 5999988753 46899999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC----CCC
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW----PKI 612 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~~ 612 (1196)
+++|+||||||+||+++.++.+||+|||++....... .......|++.|+|||++.+. ..+
T Consensus 129 ~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~---------------~~~~~~~g~~~y~aPE~~~~~~~~~~~~ 193 (272)
T cd06637 129 QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV---------------GRRNTFIGTPYWMAPEVIACDENPDATY 193 (272)
T ss_pred HCCCccCCCCHHHEEECCCCCEEEccCCCceeccccc---------------ccCCcccccccccCHhHhccccCcCCCC
Confidence 9999999999999999999999999999987542111 012345789999999998631 347
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
+.++|||||||++|||++ ||.............. ...........+..+.+||.+||..||.+|||+.+++.|+||
T Consensus 194 ~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 194 DFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-NPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred CchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc-CCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 889999999999999997 6655444333322222 111111223455689999999999999999999999999997
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-35 Score=334.98 Aligned_cols=275 Identities=28% Similarity=0.444 Sum_probs=214.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc-hhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++.+.||.|+||.||+|.+..+++.||+|.+....... .....+.+|+.+++.++||||+++++.+.
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------- 71 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQ--------- 71 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeee---------
Confidence 47899999999999999999999899999999997654332 34567889999999999999999998762
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
.....|++|||+. ++|.+++... ..+++..++.++.||+.||+|||
T Consensus 72 -------------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH 120 (316)
T cd05574 72 -------------------------------TETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLH 120 (316)
T ss_pred -------------------------------cCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 4999988754 56999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCC--CC------------CCCCCccccCcCccccccCCC
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--FP------------TDTGGVSVDGTGQVGTYFYTA 602 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~--~~------------~~~~~~~~~~~~~~GT~~Y~A 602 (1196)
++|++||||||+||+++.++.++|+|||++............. .. ..............||..|+|
T Consensus 121 ~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~a 200 (316)
T cd05574 121 LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIA 200 (316)
T ss_pred HCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcC
Confidence 9999999999999999999999999999997653221100000 00 000000112234578999999
Q ss_pred chhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC
Q 000993 603 PEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 679 (1196)
Q Consensus 603 PE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt 679 (1196)
||++.+ ..++.++||||||+++|+|++ ||...................+. ....+..+.++|++||..||.+|||
T Consensus 201 PE~~~~-~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~R~s 278 (316)
T cd05574 201 PEVISG-DGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPG-SPPVSSSARDLIRKLLVKDPSKRLG 278 (316)
T ss_pred HHHHcC-CCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCC-ccccCHHHHHHHHHHccCCHhHCCC
Confidence 999987 568999999999999999996 77655554444443332222222 2225678999999999999999999
Q ss_pred ----HHHHHhccCCCCchHHHH
Q 000993 680 ----ATELLQDALPPQMEYELL 697 (1196)
Q Consensus 680 ----a~eiL~~~~~~~~~~~~~ 697 (1196)
++++++|+||.+..+..+
T Consensus 279 ~~~~~~~ll~~~~~~~~~~~~~ 300 (316)
T cd05574 279 SKRGAAEIKQHPFFRGVNWALI 300 (316)
T ss_pred chhhHHHHHcCchhhcCChhhc
Confidence 999999999998776533
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-35 Score=324.64 Aligned_cols=251 Identities=26% Similarity=0.449 Sum_probs=203.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||.|+||.||+|.+..+++.+|+|++...... ....+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--------- 71 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD--DFEIIQQEISMLKECRHPNIVAYFGSYLR--------- 71 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh--hHHHHHHHHHHHHhCCCCChhceEEEEEe---------
Confidence 6899999999999999999999989999999999754332 45778999999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|++|||+++ +|.+++... ..+++..++.++.|++.||+|||++
T Consensus 72 -------------------------------~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~ 120 (262)
T cd06613 72 -------------------------------RDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHET 120 (262)
T ss_pred -------------------------------CCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3568999999975 898888766 7899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC--CCCCCcc
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PKIDEKA 616 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~~s~ks 616 (1196)
|++|+||||+||+++.++.+||+|||++....... .......++..|+|||.+.+. +.++.++
T Consensus 121 ~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~ 185 (262)
T cd06613 121 GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI---------------AKRKSFIGTPYWMAPEVAAVERKGGYDGKC 185 (262)
T ss_pred CceecCCChhhEEECCCCCEEECccccchhhhhhh---------------hccccccCCccccCchhhcccccCCcCchh
Confidence 99999999999999999999999999997653211 011234688899999998763 2678999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC--CCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE--LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~--~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
|+|||||++|||++ ||.................. ........+.++.++|++||..+|.+|||+.+++.|+|
T Consensus 186 Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 186 DIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred hhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 99999999999997 77655443333322221111 11122234567899999999999999999999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=332.39 Aligned_cols=254 Identities=27% Similarity=0.445 Sum_probs=201.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||+|+||.||+|.++.+++.||+|++..........+.+.+|+.+++.++||||++++++|.
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---------- 70 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFR---------- 70 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcc----------
Confidence 4789999999999999999999989999999988654444344567889999999999999999998762
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
.....|+||||+++ .|..+......+++.+++.++.||+.||+|||+.|
T Consensus 71 ------------------------------~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 120 (286)
T cd07846 71 ------------------------------RKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHN 120 (286)
T ss_pred ------------------------------cCCeEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 24568999999986 56666666667999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
++||||+|+||+++.++.++|+|||++..+.... ...+...++..|+|||++.+...++.++|||
T Consensus 121 i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 185 (286)
T cd07846 121 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG---------------EVYTDYVATRWYRAPELLVGDTKYGRAVDIW 185 (286)
T ss_pred ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc---------------cccCcccceeeccCcHHhccccccCchHhHH
Confidence 9999999999999999999999999987643211 1123356889999999988655678999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcC-------------------CCC---------CccccCCHHHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKG-------------------ELP---------PSWVAKFSEQESLLRR 668 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~-------------------~~p---------~~~~~~~~~l~~LI~~ 668 (1196)
||||++|||++ ||......+.......... ..+ ..+...+..+.+|+.+
T Consensus 186 slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 265 (286)
T cd07846 186 AVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQ 265 (286)
T ss_pred HHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHH
Confidence 99999999997 5543332221111111000 000 0122345678999999
Q ss_pred cccCCCCCCCCHHHHHhccCC
Q 000993 669 LMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~ 689 (1196)
||+.+|.+||++.++++|+||
T Consensus 266 ~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 266 CLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred HhcCCcccchhHHHHhcCCCC
Confidence 999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-35 Score=329.53 Aligned_cols=254 Identities=30% Similarity=0.464 Sum_probs=203.5
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||.|+||.||+|.+..+|+.||+|++............+.+|+.+++.++||||+++++++..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---------- 70 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPH---------- 70 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEec----------
Confidence 5889999999999999999999999999999998665444456789999999999999999999988732
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
...+|+||||++++|.+++.. ...+++.+++.++.||+.||+|||++|+
T Consensus 71 ------------------------------~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 120 (286)
T cd07832 71 ------------------------------GSGFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGI 120 (286)
T ss_pred ------------------------------CCeeEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 456799999997799998864 4569999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+|+||||+||+++.++.++|+|||++........ .......|+..|+|||.+.+...++.++||||
T Consensus 121 ~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s 186 (286)
T cd07832 121 MHRDLKPANLLISADGVLKIADFGLARLFSEEEP--------------RLYSHQVATRWYRAPELLYGARKYDPGVDLWA 186 (286)
T ss_pred ecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC--------------CccccccCcccccCceeeeccccCCchhHHHH
Confidence 9999999999999999999999999976532110 11223478999999999876556789999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-------------------CC--------CccccCCHHHHHHHHHcc
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQKGE-------------------LP--------PSWVAKFSEQESLLRRLM 670 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-------------------~p--------~~~~~~~~~l~~LI~~cL 670 (1196)
|||++|||++ ||....+.......+..... .+ .........+.++|++||
T Consensus 187 lG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 266 (286)
T cd07832 187 VGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLL 266 (286)
T ss_pred HHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHh
Confidence 9999999997 44433332222211111000 00 011233467899999999
Q ss_pred cCCCCCCCCHHHHHhccCC
Q 000993 671 SPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~~~~ 689 (1196)
+.||.+|||++++++|+||
T Consensus 267 ~~~p~~R~~~~~~l~h~~~ 285 (286)
T cd07832 267 VYDPSKRLSAAEALRHPYF 285 (286)
T ss_pred ccChhhCCCHHHHhhCcCc
Confidence 9999999999999999997
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=324.41 Aligned_cols=257 Identities=28% Similarity=0.449 Sum_probs=205.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC---chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~---~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
++|++.+.||+|+||.||+|.+..+|..||||++...... ......+.+|+.+++.++||||++++++|.+.
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 76 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP----- 76 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC-----
Confidence 5899999999999999999999999999999998654322 23346788999999999999999999887331
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....+|++|||++ ++|.+++.....+++..+..++.|++.||+|||
T Consensus 77 ---------------------------------~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH 123 (265)
T cd06652 77 ---------------------------------MERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLH 123 (265)
T ss_pred ---------------------------------CCceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1346789999997 589999988788999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
+++++|+||||+||+++.++.++|+|||+++......... .......|+..|+|||++.+ ..++.++
T Consensus 124 ~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 190 (265)
T cd06652 124 SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSG------------TGMKSVTGTPYWMSPEVISG-EGYGRKA 190 (265)
T ss_pred hCCEecCCCCHHHEEecCCCCEEECcCccccccccccccc------------cccccCCCCccccChhhhcC-CCCCcch
Confidence 9999999999999999999999999999997643211000 01223468899999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
|+|||||++|||++ ||.............. ....+......+..+.++|++||. +|.+||+++++++|+|+.
T Consensus 191 Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 191 DIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT-QPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred hHHHHHHHHHHHhhCCCCCCccchHHHHHHHhc-CCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 99999999999996 7765544333332222 222232333445678899999995 999999999999999874
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-35 Score=326.10 Aligned_cols=257 Identities=27% Similarity=0.456 Sum_probs=204.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC---chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~---~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.+|...+.||+|+||.||+|.+..++..||+|++...... ......+.+|+.+++.++||||+++++++.+.
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 76 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDR----- 76 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcC-----
Confidence 4788899999999999999999999999999998754322 23345788999999999999999999876431
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....++++|||++ ++|.+++.....+++...+.++.||+.||+|||
T Consensus 77 ---------------------------------~~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH 123 (266)
T cd06651 77 ---------------------------------AEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLH 123 (266)
T ss_pred ---------------------------------CCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1356799999997 489999988888999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
+++|+||||||+||+++.++.+||+|||+++........ ........++..|+|||.+.+ ..++.++
T Consensus 124 ~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 190 (266)
T cd06651 124 SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMS------------GTGIRSVTGTPYWMSPEVISG-EGYGRKA 190 (266)
T ss_pred hCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccccc------------CCccccCCccccccCHHHhCC-CCCCchh
Confidence 999999999999999999999999999999764321100 001123458899999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
|||||||++|||++ ||.............. ....|.......+.++++| +||..+|.+||+++++++||||+
T Consensus 191 Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 191 DVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIAT-QPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred hhHHHHHHHHHHHHCCCCccccchHHHHHHHhc-CCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 99999999999997 7765544443332222 2222222233456788888 67778999999999999999986
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-35 Score=330.15 Aligned_cols=256 Identities=27% Similarity=0.370 Sum_probs=204.6
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
.|++.+.||.|+||.||+|.+..++..+|+|.+... .......+.+|+.+++.++||||+++++.|..
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~---------- 73 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYY---------- 73 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC--CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEee----------
Confidence 367889999999999999999999999999988643 23445678899999999999999999988743
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
....|+||||+++ +|..++.. ..++++..++.++.||+.||+|||+.|
T Consensus 74 ------------------------------~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ 123 (282)
T cd06643 74 ------------------------------ENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENK 123 (282)
T ss_pred ------------------------------CCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3467999999975 77777654 457999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC----CCCCCCc
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKIDEK 615 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~s~k 615 (1196)
++||||||+|||++.++.+||+|||++....... .......+|+.|+|||++.. ...++.+
T Consensus 124 i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~ 188 (282)
T cd06643 124 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI---------------QRRDSFIGTPYWMAPEVVMCETSKDRPYDYK 188 (282)
T ss_pred eeecCCCcccEEEccCCCEEEccccccccccccc---------------cccccccccccccCHhhccccCCCCCCCCcc
Confidence 9999999999999999999999999987542110 01223468999999999852 2347789
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
+|||||||++|||++ ||..........................+.++.++|.+||+.||.+||++.++++|+|+...
T Consensus 189 ~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 189 ADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred chhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 999999999999996 77665554444443332222222223456789999999999999999999999999998765
Q ss_pred hH
Q 000993 693 EY 694 (1196)
Q Consensus 693 ~~ 694 (1196)
..
T Consensus 269 ~~ 270 (282)
T cd06643 269 SN 270 (282)
T ss_pred CC
Confidence 43
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=343.67 Aligned_cols=260 Identities=28% Similarity=0.410 Sum_probs=203.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++.+.||+|+||.||+|++..+|+.||||++............+.+|+.+++.++||||++++++|.....
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---- 89 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKS---- 89 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCC----
Confidence 3478999999999999999999999999999999986544444455678899999999999999999988743210
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
..+...+|+|||||+++|.+.+... +++..+..++.||+.||+|||++
T Consensus 90 ------------------------------~~~~~~~~lv~e~~~~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~ 137 (353)
T cd07850 90 ------------------------------LEEFQDVYLVMELMDANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSA 137 (353)
T ss_pred ------------------------------ccccCcEEEEEeccCCCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhC
Confidence 0123467999999999999888654 89999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+||+++.++.+||+|||+++...... ......+|+.|+|||++.+ ..++.++||
T Consensus 138 gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv 200 (353)
T cd07850 138 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF----------------MMTPYVVTRYYRAPEVILG-MGYKENVDI 200 (353)
T ss_pred CeeeCCCCHHHEEECCCCCEEEccCccceeCCCCC----------------CCCCCcccccccCHHHHhC-CCCCCchhh
Confidence 99999999999999999999999999997542111 1233468899999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC------------------------------------CCCc----c
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE------------------------------------LPPS----W 655 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~------------------------------------~p~~----~ 655 (1196)
|||||++|+|++ ||............+...+. .+.. .
T Consensus 201 wslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (353)
T cd07850 201 WSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHN 280 (353)
T ss_pred HhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCccccccc
Confidence 999999999996 66543322111111100000 0000 0
Q ss_pred ccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 656 VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 656 ~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
...++.+.++|.+||+.||.+|||+.++|+|+|+..
T Consensus 281 ~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~ 316 (353)
T cd07850 281 KLKASQARDLLSKMLVIDPEKRISVDDALQHPYINV 316 (353)
T ss_pred ccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence 112346789999999999999999999999998874
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=331.10 Aligned_cols=256 Identities=29% Similarity=0.443 Sum_probs=206.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||.|+||.||+|.+..+++.||+|.+... .......+.+|+.+++.++||||+++++.+..
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 73 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFY--------- 73 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEec---------
Confidence 5799999999999999999999989999999998743 33345678899999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+||||+++ +|.+++... ..+++..++.++.|++.||.|||++
T Consensus 74 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~ 122 (280)
T cd06611 74 -------------------------------ENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH 122 (280)
T ss_pred -------------------------------CCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3467999999975 898888764 5699999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC----CCCCCC
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKIDE 614 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~s~ 614 (1196)
||+||||||+||+++.++.++|+|||++....... .......||+.|+|||.+.. ...++.
T Consensus 123 ~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~ 187 (280)
T cd06611 123 KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL---------------QKRDTFIGTPYWMAPEVVACETFKDNPYDY 187 (280)
T ss_pred CcccCCCChhhEEECCCCCEEEccCccchhhcccc---------------cccceeecchhhcCHHHHhhcccCCCCCCc
Confidence 99999999999999999999999999987542111 11233568999999999753 134678
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
++|+|||||++|||++ ||..........................+.++.++|.+||+.+|.+||++.++++|+|+..
T Consensus 188 ~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~ 267 (280)
T cd06611 188 KADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSD 267 (280)
T ss_pred cccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcc
Confidence 9999999999999997 7766554444333322211111122345678999999999999999999999999999987
Q ss_pred ch
Q 000993 692 ME 693 (1196)
Q Consensus 692 ~~ 693 (1196)
..
T Consensus 268 ~~ 269 (280)
T cd06611 268 QS 269 (280)
T ss_pred cc
Confidence 53
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-35 Score=329.69 Aligned_cols=252 Identities=25% Similarity=0.384 Sum_probs=199.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++++.||+|+||.||+|.+..+++.||+|++... ........+.+|+.+++.++||||+++++.+..
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--------- 70 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLD-ITVELQKQIMSELEILYKCDSPYIIGFYGAFFV--------- 70 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecC-CChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEE---------
Confidence 4688899999999999999999999999999998743 233445678999999999999999999988743
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
....++||||+++ +|..+ ..+++..+..++.||+.||+|||++|
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~ 115 (279)
T cd06619 71 -------------------------------ENRISICTEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLK 115 (279)
T ss_pred -------------------------------CCEEEEEEecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3467899999986 55433 35788999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+|+||||+|||++.++.+||+|||++..+... .....+||+.|+|||++.+ ..++.++|+|
T Consensus 116 i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Dvw 177 (279)
T cd06619 116 ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS-----------------IAKTYVGTNAYMAPERISG-EQYGIHSDVW 177 (279)
T ss_pred EeeCCCCHHHEEECCCCCEEEeeCCcceecccc-----------------cccCCCCChhhcCceeecC-CCCCCcchHH
Confidence 999999999999999999999999999754211 1234578999999999987 5689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHH------HHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 620 SLGIVFFELWH---PFSTAMERQ------IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~------~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
||||++|+|++ ||....... ...................++++.++|.+||+.||.+||+++++++|+|+.
T Consensus 178 slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~ 257 (279)
T cd06619 178 SLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIV 257 (279)
T ss_pred HHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccc
Confidence 99999999997 665422110 111111111111111223567899999999999999999999999999998
Q ss_pred CchHH
Q 000993 691 QMEYE 695 (1196)
Q Consensus 691 ~~~~~ 695 (1196)
+....
T Consensus 258 ~~~~~ 262 (279)
T cd06619 258 QYNDG 262 (279)
T ss_pred cccCc
Confidence 76543
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=321.90 Aligned_cols=250 Identities=33% Similarity=0.532 Sum_probs=208.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|+.++.||.|+||.||.+++..+++.+++|.+.....+.....++.+|+.++++++||||+++++++.+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~---------- 70 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMD---------- 70 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEec----------
Confidence 5889999999999999999999999999999998766555666788999999999999999999998843
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...++++||||+ ++|.+++... ..+++.++..++.|++.||+|||+.
T Consensus 71 ------------------------------~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 120 (256)
T cd08221 71 ------------------------------DNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA 120 (256)
T ss_pred ------------------------------CCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 356899999997 5999998764 4689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|++||||||+||+++.++.+||+|||++........ ......|++.|+|||.+.+ ..++.++|+
T Consensus 121 ~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~---------------~~~~~~~~~~y~ape~~~~-~~~~~~~Dv 184 (256)
T cd08221 121 GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS---------------MAETVVGTPYYMSPELCQG-VKYNFKSDI 184 (256)
T ss_pred CccccCCChHhEEEeCCCCEEECcCcceEEcccccc---------------cccccCCCccccCHhhcCC-CCCCCcchh
Confidence 999999999999999999999999999975432110 1233568999999999887 458899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
||||+++|||++ ||......+....... +..++.....+.++.++|.+||..+|.+||++.++++|+|+
T Consensus 185 ~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 185 WALGCVLYELLTLKRTFDATNPLNLVVKIVQ--GNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc--CCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 999999999996 6665544444433332 23333334556789999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-35 Score=332.16 Aligned_cols=258 Identities=28% Similarity=0.469 Sum_probs=203.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|++.+.||+|++|.||+|.++.+|+.||+|++............+.+|+.+++.++||||+++++++..
T Consensus 1 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 72 (294)
T PLN00009 1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-------- 72 (294)
T ss_pred CCceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEec--------
Confidence 368999999999999999999999999999999987554433344678899999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~--l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
..+.|+||||++++|.+.+..... +++..++.++.||+.||+|||+
T Consensus 73 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~ 120 (294)
T PLN00009 73 --------------------------------EKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHS 120 (294)
T ss_pred --------------------------------CCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence 357899999999999888865443 5788899999999999999999
Q ss_pred CCCcccCCCcCcEEecC-CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 538 QGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++++||||||+||+++. ++.+||+|||++....... ...+...+++.|+|||++.+...++.++
T Consensus 121 ~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~ 185 (294)
T PLN00009 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV---------------RTFTHEVVTLWYRAPEILLGSRHYSTPV 185 (294)
T ss_pred CCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc---------------cccccCceeecccCHHHHhCCCCCCcHH
Confidence 99999999999999985 4579999999997542110 0112346789999999987645688999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC------------------C---CC-----ccccCCHHHHHHHH
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE------------------L---PP-----SWVAKFSEQESLLR 667 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~------------------~---p~-----~~~~~~~~l~~LI~ 667 (1196)
|||||||++|+|++ ||.................. . ++ .....++.+.++|.
T Consensus 186 Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 265 (294)
T PLN00009 186 DIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLS 265 (294)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHH
Confidence 99999999999997 66544433333322111000 0 00 01234567899999
Q ss_pred HcccCCCCCCCCHHHHHhccCCCCc
Q 000993 668 RLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
+||+.+|.+||++.++++|+||...
T Consensus 266 ~~l~~~P~~Rps~~~~l~~~~~~~~ 290 (294)
T PLN00009 266 KMLRLDPSKRITARAALEHEYFKDL 290 (294)
T ss_pred HHccCChhhCcCHHHHhcCchHhHH
Confidence 9999999999999999999998764
|
|
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-35 Score=330.34 Aligned_cols=256 Identities=26% Similarity=0.392 Sum_probs=204.2
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc-hhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
|+..+.||+|+||+||+|.+..+++.||+|++....... .....+.+|+.+|+.++|+||+++++++..
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~---------- 71 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYET---------- 71 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEec----------
Confidence 678899999999999999999999999999987543222 223457889999999999999999887632
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|++|||++ ++|.+++... ..+++..+..++.|++.||.|||+.
T Consensus 72 ------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~ 121 (285)
T cd05632 72 ------------------------------KDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE 121 (285)
T ss_pred ------------------------------CCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 356899999997 4888877543 3699999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+||+++.++.+||+|||++....... ......|++.|+|||++.+ ..++.++|+
T Consensus 122 ~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~g~~~~~aPE~~~~-~~~~~~~Di 184 (285)
T cd05632 122 NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE----------------SIRGRVGTVGYMAPEVLNN-QRYTLSPDY 184 (285)
T ss_pred CeeecCCCHHHEEECCCCCEEEecCCcceecCCCC----------------cccCCCCCcCccChHHhcC-CCCCcccch
Confidence 99999999999999999999999999986532110 1123478999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-CCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhccCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALP 689 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~~~~ 689 (1196)
|||||++|||++ ||.................. .+......++++.+|+.+||+.||.+||+ +.+++.|+||
T Consensus 185 ~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~ 264 (285)
T cd05632 185 WGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFF 264 (285)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhh
Confidence 999999999996 87655433222111111111 11122345668899999999999999999 8999999999
Q ss_pred CCchHH
Q 000993 690 PQMEYE 695 (1196)
Q Consensus 690 ~~~~~~ 695 (1196)
......
T Consensus 265 ~~~~~~ 270 (285)
T cd05632 265 RNMNFK 270 (285)
T ss_pred hcCCHH
Confidence 998665
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-35 Score=332.18 Aligned_cols=255 Identities=27% Similarity=0.416 Sum_probs=202.5
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.|+..+.||+|+||.||+|.+..+++.||||.+...... ......+.+|+.+++.++|+||+++++.+.+
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~--------- 71 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYET--------- 71 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEec---------
Confidence 377889999999999999999999999999998754322 2223457789999999999999999987632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|++|||++ ++|.+++... ..+++..+..++.|++.||.|||+
T Consensus 72 -------------------------------~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~ 120 (285)
T cd05630 72 -------------------------------KDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQ 120 (285)
T ss_pred -------------------------------CCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 356899999996 5898888543 358999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
.||+||||||+||+++.++.++|+|||++....... ......||+.|+|||++.+ ..++.++|
T Consensus 121 ~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~----------------~~~~~~g~~~y~aPE~~~~-~~~~~~~D 183 (285)
T cd05630 121 ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ----------------TIKGRVGTVGYMAPEVVKN-ERYTFSPD 183 (285)
T ss_pred CCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc----------------cccCCCCCccccChHHHcC-CCCCCccc
Confidence 999999999999999999999999999986532110 1123478999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHH---HHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhc
Q 000993 618 MYSLGIVFFELWH---PFSTAMER---QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQD 686 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~---~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~ 686 (1196)
+|||||++|+|++ ||...... ........... .......++++.+|+++||+.||.+||| ++++++|
T Consensus 184 iwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 184 WWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQ--EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred cHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhh--hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 9999999999996 77643221 11111111000 1122345678999999999999999999 9999999
Q ss_pred cCCCCchHH
Q 000993 687 ALPPQMEYE 695 (1196)
Q Consensus 687 ~~~~~~~~~ 695 (1196)
+||.+..+.
T Consensus 262 ~~~~~~~~~ 270 (285)
T cd05630 262 PLFKQINFK 270 (285)
T ss_pred hhhhccCHH
Confidence 999886555
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-35 Score=331.64 Aligned_cols=258 Identities=27% Similarity=0.398 Sum_probs=205.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
+.|+++++||.|+||.||+|++..+++.||+|++... .......+.+|+.+++.++||||+++++++..
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 80 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYMVEIEILATCNHPYIVKLLGAFYW--------- 80 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEe---------
Confidence 5689999999999999999999999999999998643 33456778899999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+||||+++ +|..++.+ ...+++..++.++.||+.||+|||++
T Consensus 81 -------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~ 129 (292)
T cd06644 81 -------------------------------DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM 129 (292)
T ss_pred -------------------------------CCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 3467999999975 77776654 45689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC----CCCCCC
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKIDE 614 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~s~ 614 (1196)
|++||||||+||+++.++.+||+|||++....... .......+++.|+|||++.+ ...++.
T Consensus 130 ~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 194 (292)
T cd06644 130 KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL---------------QRRDSFIGTPYWMAPEVVMCETMKDTPYDY 194 (292)
T ss_pred CeeecCCCcceEEEcCCCCEEEccCccceeccccc---------------cccceecCCccccCceeeccccccCCCCCc
Confidence 99999999999999999999999999986532110 11233468899999999853 234688
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
++|||||||++|||++ ||..........................+.++.++|++||..||.+||+++++++|+|+..
T Consensus 195 ~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 274 (292)
T cd06644 195 KADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSS 274 (292)
T ss_pred hhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 9999999999999997 7765544443333322111111222345678999999999999999999999999999987
Q ss_pred chHH
Q 000993 692 MEYE 695 (1196)
Q Consensus 692 ~~~~ 695 (1196)
....
T Consensus 275 ~~~~ 278 (292)
T cd06644 275 VTSN 278 (292)
T ss_pred cccc
Confidence 6543
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-35 Score=330.33 Aligned_cols=254 Identities=25% Similarity=0.425 Sum_probs=198.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|++.+.||.|+||.||+|.++.+++.||||.+...... .....+.+|+.+++.++||||+++++++.
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------- 73 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE-GAPFTAIREASLLKDLKHANIVTLHDIIH--------- 73 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc-CCchhHHHHHHHHhhCCCcceeeEEEEEe---------
Confidence 47899999999999999999999989999999998754322 22345678999999999999999998873
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+.|+||||++++|.+++... ..+++..++.++.||+.||.|||++
T Consensus 74 -------------------------------~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~ 122 (291)
T cd07844 74 -------------------------------TKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQR 122 (291)
T ss_pred -------------------------------cCCeEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 24578999999999999988754 4689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+||+++.++.+||+|||+++...... .......+++.|+|||++.+...++.++||
T Consensus 123 ~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv 187 (291)
T cd07844 123 RVLHRDLKPQNLLISERGELKLADFGLARAKSVPS---------------KTYSNEVVTLWYRPPDVLLGSTEYSTSLDM 187 (291)
T ss_pred CeecccCCHHHEEEcCCCCEEECccccccccCCCC---------------ccccccccccccCCcHHhhcCcccCcHHHH
Confidence 99999999999999999999999999987532111 011223568899999998765568899999
Q ss_pred HHHHHHHHHhhc---CCchhHH-HHHHHHHhhhcCC----------------------C-CC----ccccCC--HHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAME-RQIVLSDLKQKGE----------------------L-PP----SWVAKF--SEQESL 665 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~-~~~~~~~l~~~~~----------------------~-p~----~~~~~~--~~l~~L 665 (1196)
|||||++|+|++ ||..... .+........... . +. ...... .++.++
T Consensus 188 ~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (291)
T cd07844 188 WGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEEL 267 (291)
T ss_pred HHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHH
Confidence 999999999996 6654331 1111111000000 0 00 001122 677899
Q ss_pred HHHcccCCCCCCCCHHHHHhccCC
Q 000993 666 LRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 666 I~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|.+||+.+|.+|||+.++++|+||
T Consensus 268 i~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 268 ALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred HHHHhccCcccccCHHHHhcCCCC
Confidence 999999999999999999999997
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-35 Score=324.65 Aligned_cols=255 Identities=31% Similarity=0.519 Sum_probs=204.7
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc-------hhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-------PVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-------~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
|.+...||.|+||.||+|.+..+++.||+|.+....... .....+.+|+.+++.++||||+++++++.+
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 77 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLD---- 77 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe----
Confidence 567789999999999999999899999999887543321 123568899999999999999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
..+.+++|||+++ +|.+++.....+++..+..++.|++.||+|
T Consensus 78 ------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~ 121 (267)
T cd06628 78 ------------------------------------ADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNY 121 (267)
T ss_pred ------------------------------------CCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHH
Confidence 3467899999975 899999888889999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++|++||||||+||+++.++.+||+|||+++......... ..........|++.|+|||.+.+ ..++.
T Consensus 122 lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~---------~~~~~~~~~~~~~~y~~pe~~~~-~~~~~ 191 (267)
T cd06628 122 LHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLST---------KTNGARPSLQGSVFWMAPEVVKQ-TSYTR 191 (267)
T ss_pred HHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccccccC---------CccccccccCCCcCccChhHhcc-CCCCc
Confidence 999999999999999999999999999999998654221100 00011223468899999999987 56889
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
++|+|||||++|+|++ ||.............. ...+......+..+.++|++||+.||.+||++.++++|+||
T Consensus 192 ~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 192 KADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE--NASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred hhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc--cCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 9999999999999996 7766544333332222 22333334456789999999999999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-35 Score=332.66 Aligned_cols=257 Identities=26% Similarity=0.394 Sum_probs=203.4
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC---chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~---~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+|++.+.||+|+||.||+|.+..+|+.||||+++..... ......+.+|+.+++.++||||+++++++.+
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------- 73 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH------- 73 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec-------
Confidence 478889999999999999999989999999999765433 3344567789999999999999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+||||+.++|.+++.... .+++..++.++.||++||+|||+
T Consensus 74 ---------------------------------~~~~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~ 120 (298)
T cd07841 74 ---------------------------------KSNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHS 120 (298)
T ss_pred ---------------------------------CCEEEEEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 45789999999889999998766 79999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+|+||||+||+++.++.+||+|||+++...... .......+++.|+|||.+.+...++.++|
T Consensus 121 ~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 185 (298)
T cd07841 121 NWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN---------------RKMTHQVVTRWYRAPELLFGARHYGVGVD 185 (298)
T ss_pred CCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC---------------ccccccccceeeeCHHHHhCCCCCCcHHH
Confidence 999999999999999999999999999997653211 01122356889999999876556889999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC--------------------CC-----CccccCCHHHHHHHHHc
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE--------------------LP-----PSWVAKFSEQESLLRRL 669 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~--------------------~p-----~~~~~~~~~l~~LI~~c 669 (1196)
+|||||++|||++ ||....+............. .+ ..+...+..+.++|.+|
T Consensus 186 v~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 265 (298)
T cd07841 186 MWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRL 265 (298)
T ss_pred HHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHH
Confidence 9999999999997 34333322221111110000 00 01122346788999999
Q ss_pred ccCCCCCCCCHHHHHhccCCCCch
Q 000993 670 MSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 670 L~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
|+.||.+|||+.++++|+||.+..
T Consensus 266 l~~~P~~R~s~~e~l~~~~~~~~~ 289 (298)
T cd07841 266 LTLNPNKRITARQALEHPYFSNDP 289 (298)
T ss_pred hcCCcccCcCHHHHhhCccccCCC
Confidence 999999999999999999998754
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=324.39 Aligned_cols=249 Identities=27% Similarity=0.472 Sum_probs=202.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||.|+||.||+|++..+++.||+|.++.... ...+.+|+.+++.++||||+++++.+.+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~e~~~~~~l~~~~i~~~~~~~~~--------- 69 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED----LQEIIKEISILKQCDSPYIVKYYGSYFK--------- 69 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH----HHHHHHHHHHHHhCCCCcEeeeeeeeec---------
Confidence 689999999999999999999998899999999864321 5689999999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|++|||+++ +|.+++.. ...+++..++.++.|++.||.|||+.
T Consensus 70 -------------------------------~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~ 118 (256)
T cd06612 70 -------------------------------NTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN 118 (256)
T ss_pred -------------------------------CCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3568999999975 89998875 45689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
+++||||+|+||+++.++.+||+|||++....... .......|+..|+|||++.+ ..++.++||
T Consensus 119 ~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di 182 (256)
T cd06612 119 KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM---------------AKRNTVIGTPFWMAPEVIQE-IGYNNKADI 182 (256)
T ss_pred CcccCCCCcceEEECCCCcEEEcccccchhcccCc---------------cccccccCCccccCHHHHhc-CCCCchhhH
Confidence 99999999999999999999999999998653221 01123457889999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|||||++|+|++ ||..........................+..+.++|.+||+.||.+|||+.++++|+|+
T Consensus 183 ~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 183 WSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred HHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 999999999997 66654443333222211111111222345688999999999999999999999999996
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=330.97 Aligned_cols=252 Identities=23% Similarity=0.399 Sum_probs=205.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.+|++.+.||.|+||.||+|.+..+++.||+|.+..... .....+.+|+.+++.++||||+++++.|..
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~--------- 88 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLV--------- 88 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhCCCCCEeeEEEEEEe---------
Confidence 689999999999999999999999999999999875443 234678899999999999999999988742
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
....|+||||++ ++|.+++.. ..+++.++..++.|++.||+|||++|
T Consensus 89 -------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~g 136 (296)
T cd06654 89 -------------------------------GDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ 136 (296)
T ss_pred -------------------------------CCEEEEeecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 346899999997 589888754 46899999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+|||++.++.+||+|||++....... .......|++.|+|||.+.+ ..++.++|||
T Consensus 137 i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~ 200 (296)
T cd06654 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---------------SKRSTMVGTPYWMAPEVVTR-KAYGPKVDIW 200 (296)
T ss_pred cccCCCCHHHEEEcCCCCEEECccccchhccccc---------------cccCcccCCccccCHHHHcC-CCCCccchHH
Confidence 9999999999999999999999999987543211 01123468999999999887 5688999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
||||++|+|++ ||....................+.....++.+.++|.+||..||.+||++.++++|+|+..
T Consensus 201 s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~ 275 (296)
T cd06654 201 SLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275 (296)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhc
Confidence 99999999997 7765554333322222111111223345678999999999999999999999999999864
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-35 Score=329.59 Aligned_cols=252 Identities=28% Similarity=0.468 Sum_probs=201.7
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCc
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 462 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~ 462 (1196)
|++.+.||.|++|.||+|.++.+|..||+|++............+.+|+.+++.++||||+++++++.+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~----------- 69 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHS----------- 69 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheecc-----------
Confidence 567889999999999999999999999999997654444445678899999999999999999988632
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 463 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 463 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
....|++|||++++|.+++.... .+++..++.++.||+.||+|||++++
T Consensus 70 -----------------------------~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~ 120 (283)
T cd07835 70 -----------------------------ENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRV 120 (283)
T ss_pred -----------------------------CCeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 35789999999989999987665 79999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+||||+|+||+++.++.++|+|||+++...... .......+++.|+|||++.+...++.++||||
T Consensus 121 ~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s 185 (283)
T cd07835 121 LHRDLKPQNLLIDREGALKLADFGLARAFGVPV---------------RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWS 185 (283)
T ss_pred eCCCCCHHHEEEcCCCcEEEeecccccccCCCc---------------cccCccccccCCCCCceeecCcccCcHHHHHH
Confidence 999999999999999999999999997542211 01123357889999998876455789999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhcC--------------------------CCCCccccCCHHHHHHHHHccc
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQKG--------------------------ELPPSWVAKFSEQESLLRRLMS 671 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~~--------------------------~~p~~~~~~~~~l~~LI~~cL~ 671 (1196)
||+++|+|++ ||................. .........++.+.++|.+||+
T Consensus 186 lG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 265 (283)
T cd07835 186 IGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLV 265 (283)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhc
Confidence 9999999997 6654433222222111000 0001122345688999999999
Q ss_pred CCCCCCCCHHHHHhccCC
Q 000993 672 PSPSDRPSATELLQDALP 689 (1196)
Q Consensus 672 ~dP~~RPta~eiL~~~~~ 689 (1196)
.||.+|||+.++++|+||
T Consensus 266 ~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 266 YDPAKRISAKAALQHPYF 283 (283)
T ss_pred CChhhCcCHHHHhcCCCC
Confidence 999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=330.88 Aligned_cols=275 Identities=27% Similarity=0.379 Sum_probs=208.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.+++|++.++||.|+||.||+|.++.+++.||||++............+.+|+++++.++||||+++++.+.+...
T Consensus 6 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~---- 81 (311)
T cd07866 6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPD---- 81 (311)
T ss_pred ccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccc----
Confidence 3689999999999999999999999999999999987654433334467789999999999999999987754310
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
........+|++|||++++|...+.. ...+++..++.++.||++||+|||+
T Consensus 82 ----------------------------~~~~~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~ 133 (311)
T cd07866 82 ----------------------------KSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHE 133 (311)
T ss_pred ----------------------------cccccCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 00123457899999999988887765 3479999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+||+++.++.+||+|||+++........... .........+...|++.|+|||.+.+...++.++|
T Consensus 134 ~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 209 (311)
T cd07866 134 NHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKG----GGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVD 209 (311)
T ss_pred CCeecCCCCHHHEEECCCCCEEECcCccchhccCCCccccc----CCcccccccccceeccCcCChHHhhCCCccCchhH
Confidence 99999999999999999999999999999865432211000 00001112344578999999999876556899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-----------------------CCC----ccccCCHHHHHHHH
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-----------------------LPP----SWVAKFSEQESLLR 667 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-----------------------~p~----~~~~~~~~l~~LI~ 667 (1196)
||||||++|||++ ||.................. .++ .+....+.+.++|.
T Consensus 210 v~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 289 (311)
T cd07866 210 IWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLS 289 (311)
T ss_pred hHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHH
Confidence 9999999999997 55544333322221111000 000 01223357889999
Q ss_pred HcccCCCCCCCCHHHHHhccCC
Q 000993 668 RLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
+||+.||.+|||+.+++.|+||
T Consensus 290 ~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 290 KLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred HHcccCcccCcCHHHHhcCCCC
Confidence 9999999999999999999997
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=321.52 Aligned_cols=250 Identities=31% Similarity=0.591 Sum_probs=206.6
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||+|+||.||++++..+|+.||+|.+............+.+|+.+++.++||||+++++++.
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----------- 69 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFE----------- 69 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeec-----------
Confidence 588999999999999999999999999999999765444445568899999999999999999998762
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
.....|+||||+. ++|.+.+.... .+++.+++.++.|++.||+|||++
T Consensus 70 -----------------------------~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 120 (256)
T cd08218 70 -----------------------------ENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR 120 (256)
T ss_pred -----------------------------CCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2357899999996 58999887543 588999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|++|+||+|+||+++.++.++|+|||++........ ......|++.|+|||++.+ ..++.++|+
T Consensus 121 ~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~---------------~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv 184 (256)
T cd08218 121 KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE---------------LARTCIGTPYYLSPEICEN-RPYNNKSDI 184 (256)
T ss_pred CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh---------------hhhhccCCccccCHHHhCC-CCCCCccch
Confidence 999999999999999999999999999975432110 0122458889999999987 568899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|||||++|+|++ ||......+.....+. +..++.....+.++.++|.+||+.+|.+||++.++++|+||
T Consensus 185 ~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 185 WALGCVLYEMCTLKHAFEAGNMKNLVLKIIR--GSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred hHHHHHHHHHHcCCCCccCCCHHHHHHHHhc--CCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 999999999997 6665555544444433 23333334556789999999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-35 Score=326.13 Aligned_cols=247 Identities=18% Similarity=0.246 Sum_probs=196.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
++|++.+.||+|+||.||+|.++ ..+..||+|.++.. .+......+.+|+..++.++||||+++++++..
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 77 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAG-CSDKQRRGFLAEALTLGQFDHSNIVRLEGVITR------ 77 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCC-CCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEec------
Confidence 57899999999999999999875 34678999998743 333445678999999999999999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|+||||+++ +|.+++... ..+++..++.++.||+.||+||
T Consensus 78 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~l 123 (266)
T cd05064 78 ----------------------------------GNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYL 123 (266)
T ss_pred ----------------------------------CCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3457999999975 888888764 5789999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++|++||||||+|||++.++.+|++|||.+....... ........++..|+|||.+.+ ..++.+
T Consensus 124 H~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~ 188 (266)
T cd05064 124 SEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA--------------IYTTMSGKSPVLWAAPEAIQY-HHFSSA 188 (266)
T ss_pred HHCCEeeccccHhhEEEcCCCcEEECCCcccccccccc--------------hhcccCCCCceeecCHHHHhh-CCccch
Confidence 99999999999999999999999999999876431110 001122345678999999887 578999
Q ss_pred chhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 616 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 616 sDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
+|||||||++||+++ ||.......... .+. ....++.....+..+.+++.+||+.+|.+||++.+|++
T Consensus 189 ~Di~slG~~l~ell~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 189 SDVWSFGIVMWEVMSYGERPYWDMSGQDVIK-AVE-DGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred hHHHHHHHHHHHHhcCCCCCcCcCCHHHHHH-HHH-CCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 999999999999774 776554443322 222 22233334456678999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=327.24 Aligned_cols=257 Identities=24% Similarity=0.425 Sum_probs=200.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.++|++.+.||+|+||.||+|.++.+++.||+|++.... .....+.+|+.+++.+ +||||+++++++....
T Consensus 17 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~----- 88 (286)
T cd06638 17 SDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH---DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD----- 88 (286)
T ss_pred ccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc---chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc-----
Confidence 478999999999999999999999999999999875322 2345678899999999 6999999999875421
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
.....++|++|||++ ++|.+++.. ...+++..++.++.||+.||.
T Consensus 89 ------------------------------~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~ 138 (286)
T cd06638 89 ------------------------------VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQ 138 (286)
T ss_pred ------------------------------cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHH
Confidence 012457899999997 588887652 346899999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC----
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW---- 609 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---- 609 (1196)
|||+++++||||||+||+++.++.+||+|||+++...... .......|++.|+|||++...
T Consensus 139 ~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~ 203 (286)
T cd06638 139 HLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR---------------LRRNTSVGTPFWMAPEVIACEQQLD 203 (286)
T ss_pred HHHhCCccccCCCHHhEEECCCCCEEEccCCceeecccCC---------------CccccccCCCcccChhhhchhhhcc
Confidence 9999999999999999999999999999999987643211 011234689999999988531
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
..++.++|||||||++|||++ ||..........................+..+.++|.+||+.||.+|||+.++++|
T Consensus 204 ~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 204 STYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred ccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 347889999999999999996 67655443332222111111111112235679999999999999999999999999
Q ss_pred cCC
Q 000993 687 ALP 689 (1196)
Q Consensus 687 ~~~ 689 (1196)
+|+
T Consensus 284 ~~~ 286 (286)
T cd06638 284 VFI 286 (286)
T ss_pred ccC
Confidence 986
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=346.40 Aligned_cols=250 Identities=27% Similarity=0.389 Sum_probs=199.7
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-C-----CCeeeeeeeeeecCcc
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-H-----QHVVRYYQAWFETGVA 455 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-H-----pnIV~l~~~~~e~~~~ 455 (1196)
+|++++.||+|+||.|.+|.+..|++.||||+++.. .....+-..|+.+|..|+ | -|+|+++++|..
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~---k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f---- 259 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK---KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF---- 259 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC---hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc----
Confidence 789999999999999999999999999999999743 345667788999999996 4 489999999843
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~ 533 (1196)
..++|||+|.+..+|++++..+. .|+...++.|+.||+.||.
T Consensus 260 ------------------------------------r~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~ 303 (586)
T KOG0667|consen 260 ------------------------------------RNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALL 303 (586)
T ss_pred ------------------------------------ccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 46789999999999999998654 6999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCC--CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDAR--NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~--~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
+||..||||+||||+||||.+. ..+||+|||.|+..... ..+++-+..|.|||++.| ..
T Consensus 304 ~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~------------------vytYiQSRfYRAPEVILG-lp 364 (586)
T KOG0667|consen 304 FLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQR------------------VYTYIQSRFYRAPEVILG-LP 364 (586)
T ss_pred HHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCc------------------ceeeeeccccccchhhcc-CC
Confidence 9999999999999999999764 46999999999875321 124577889999999999 57
Q ss_pred CCCcchhHHHHHHHHHhhc--CCch-hHHHHHHHHHhh------------------------------------------
Q 000993 612 IDEKADMYSLGIVFFELWH--PFST-AMERQIVLSDLK------------------------------------------ 646 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt--Pf~~-~~~~~~~~~~l~------------------------------------------ 646 (1196)
|+.+.||||||||+.||++ |+.+ ..+.+....++.
T Consensus 365 Y~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~ 444 (586)
T KOG0667|consen 365 YDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSP 444 (586)
T ss_pred CCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccch
Confidence 9999999999999999997 4332 222222111110
Q ss_pred ----------hcCCCCCccc---cC-----CHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 647 ----------QKGELPPSWV---AK-----FSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 647 ----------~~~~~p~~~~---~~-----~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
.....|+... .. -..+.++|++||..||.+|+|+.++|+|||+....
T Consensus 445 ~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~~ 509 (586)
T KOG0667|consen 445 EVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGTS 509 (586)
T ss_pred hhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccccc
Confidence 0000111000 00 02357999999999999999999999999998653
|
|
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=345.64 Aligned_cols=251 Identities=24% Similarity=0.303 Sum_probs=194.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEE-----ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKN-----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~-----~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~ 453 (1196)
.++|++.+.||+|+||.||+|++ ..++..||||+++... .....+.+.+|+.+|+.+ +|||||+++++|.+
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~-- 110 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHINIVNLLGACTV-- 110 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc-CcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc--
Confidence 35799999999999999999975 3456789999986433 233456788999999999 89999999998733
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC------------------
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD------------------ 514 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~------------------ 514 (1196)
....|+|||||+ |+|.+++....
T Consensus 111 --------------------------------------~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 152 (375)
T cd05104 111 --------------------------------------GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYK 152 (375)
T ss_pred --------------------------------------CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHH
Confidence 335689999996 58988885421
Q ss_pred ---------------------------------------------------------CCCHHHHHHHHHHHHHHHHHHHh
Q 000993 515 ---------------------------------------------------------HFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 515 ---------------------------------------------------------~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
.+++..++.++.||+.||+|||+
T Consensus 153 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~ 232 (375)
T cd05104 153 NLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS 232 (375)
T ss_pred hhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 36788899999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++.+||+|||+++....... ........++..|+|||++.+ ..++.++|
T Consensus 233 ~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~sD 298 (375)
T cd05104 233 KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN-------------YVVKGNARLPVKWMAPESIFN-CVYTFESD 298 (375)
T ss_pred CCeeccCCchhhEEEECCCcEEEecCccceeccCccc-------------ccccCCCCCCcceeChhHhcC-CCCCCCCC
Confidence 9999999999999999999999999999976432110 000112345678999999987 56899999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 618 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 618 VwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||||||++|||++ ||............+. ....+......+.++++||.+||+.||++|||+.++++.
T Consensus 299 i~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 299 VWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIK-EGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHH-hCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 9999999999985 6765443333333333 222222223345689999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-36 Score=358.57 Aligned_cols=248 Identities=24% Similarity=0.348 Sum_probs=206.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~-----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.+.+..+.||+|+||+||+|+... ....||||.++.. .+.....+|.||+++|+.|+|||||+++|+|.+
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~-a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~---- 560 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK-AENQARQDFRREAELLAELQHPNIVRLLGVCRE---- 560 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc-ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc----
Confidence 567778999999999999998752 3467999988633 333467899999999999999999999999954
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----------C----CCHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------H----FDKEL 520 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------~----l~e~~ 520 (1196)
..-+|+|+|||. |+|.++|.... . ++..+
T Consensus 561 ------------------------------------~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q 604 (774)
T KOG1026|consen 561 ------------------------------------GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQ 604 (774)
T ss_pred ------------------------------------CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHH
Confidence 456799999996 89999996431 2 78889
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccC
Q 000993 521 AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFY 600 (1196)
Q Consensus 521 ~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y 600 (1196)
.+.++.|||.||.||-++.+|||||..+|+||.++..|||+|||+++.+...++.+ ......-..+|
T Consensus 605 ~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk-------------~~~~t~lPIRW 671 (774)
T KOG1026|consen 605 FLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYK-------------VRGNTLLPIRW 671 (774)
T ss_pred HHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhhhhhhc-------------ccCCceeeeec
Confidence 99999999999999999999999999999999999999999999999765443221 11122346799
Q ss_pred CCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCC
Q 000993 601 TAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 676 (1196)
Q Consensus 601 ~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~ 676 (1196)
||||.+.. ++|+.++|||||||+|||+++ |+.+..+.++...+. .+...+-+..+++++++||..||+.+|.+
T Consensus 672 MppEsIly-~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~--~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~ 748 (774)
T KOG1026|consen 672 MPPESILY-GKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIR--AGQLLSCPENCPTEVYSLMLECWNENPKR 748 (774)
T ss_pred CCHHHhhc-CcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHH--cCCcccCCCCCCHHHHHHHHHHhhcCccc
Confidence 99999887 689999999999999999996 999988887765543 33445555677889999999999999999
Q ss_pred CCCHHHHHh
Q 000993 677 RPSATELLQ 685 (1196)
Q Consensus 677 RPta~eiL~ 685 (1196)
||++.+|-.
T Consensus 749 RPsF~eI~~ 757 (774)
T KOG1026|consen 749 RPSFKEIHS 757 (774)
T ss_pred CCCHHHHHH
Confidence 999999853
|
|
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=330.03 Aligned_cols=253 Identities=23% Similarity=0.402 Sum_probs=206.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.+|.+.+.||.|+||.||+|.+..+|+.||+|.+..... .....+.+|+.+++.++||||+++++.+..
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--------- 87 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ--PKKELIINEILVMKELKNPNIVNFLDSFLV--------- 87 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC--chHHHHHHHHHHHHhcCCCceeeeeeeEec---------
Confidence 579999999999999999999999999999999875432 335678899999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+|+||||+++ +|..++.. ..+++.++..++.|++.||+|||++|
T Consensus 88 -------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~ 135 (296)
T cd06655 88 -------------------------------GDELFVVMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQ 135 (296)
T ss_pred -------------------------------CceEEEEEEecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3568999999975 88887754 46899999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
++||||||+||+++.++.+||+|||++....... .......|++.|+|||.+.+ ..++.++|+|
T Consensus 136 i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~ 199 (296)
T cd06655 136 VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ---------------SKRSTMVGTPYWMAPEVVTR-KAYGPKVDIW 199 (296)
T ss_pred cccCCCCHHHEEECCCCCEEEccCccchhccccc---------------ccCCCcCCCccccCcchhcC-CCCCchhhHH
Confidence 9999999999999999999999999987643211 01123468899999999887 5688999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||||++|+|++ ||..........................++.+.++|++||..||.+||++.++++|+|+...
T Consensus 200 slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~ 275 (296)
T cd06655 200 SLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLA 275 (296)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhc
Confidence 99999999997 77665544333332221211222334566789999999999999999999999999998753
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=320.48 Aligned_cols=252 Identities=35% Similarity=0.619 Sum_probs=207.1
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||.|+||.||+|.+..+|+.||+|.+...........++.+|+.+++.++||||+++++.+...
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--------- 71 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDR--------- 71 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecC---------
Confidence 58899999999999999999999999999999976655556667889999999999999999999876431
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....+|++|||++ ++|.+++.. ...+++..++.++.||+.||+|||
T Consensus 72 -----------------------------~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH 122 (265)
T cd08217 72 -----------------------------SNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECH 122 (265)
T ss_pred -----------------------------CCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence 2346799999997 589988865 357999999999999999999999
Q ss_pred -----hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 537 -----GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 537 -----s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
+.+++|+||||+||+++.++.+||+|||++....... .......|++.|+|||++.+ ..
T Consensus 123 ~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~---------------~~~~~~~~~~~~~~pE~~~~-~~ 186 (265)
T cd08217 123 NRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDS---------------SFAKTYVGTPYYMSPEQLNH-MS 186 (265)
T ss_pred cCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCc---------------ccccccccCCCccChhhhcC-CC
Confidence 9999999999999999999999999999998653211 01123468999999999987 56
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
++.++|+||||+++|+|++ ||........... .. ....+......++.+.+++.+||+.+|.+||++.+|++|||
T Consensus 187 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~ 264 (265)
T cd08217 187 YDEKSDIWSLGCLIYELCALSPPFTARNQLQLASK-IK-EGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPL 264 (265)
T ss_pred CCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHH-Hh-cCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCC
Confidence 8899999999999999996 7765543332222 22 33333333455678999999999999999999999999998
Q ss_pred C
Q 000993 689 P 689 (1196)
Q Consensus 689 ~ 689 (1196)
.
T Consensus 265 ~ 265 (265)
T cd08217 265 I 265 (265)
T ss_pred C
Confidence 4
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=337.08 Aligned_cols=265 Identities=25% Similarity=0.370 Sum_probs=204.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|.+..+|+.||||++.... .......+.+|+.+++.++||||+++++++....
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------ 76 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE-HQTFCQRTLREIKILRRFKHENIIGILDIIRPPS------ 76 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCcCchhheeeccc------
Confidence 368999999999999999999999999999999986432 2234567889999999999999999998763321
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
......+|++|||++++|.+++.. ..+++..++.++.||+.||+|||++|
T Consensus 77 -----------------------------~~~~~~~~lv~e~~~~~l~~~~~~-~~l~~~~~~~i~~ql~~aL~~LH~~~ 126 (336)
T cd07849 77 -----------------------------FESFNDVYIVQELMETDLYKLIKT-QHLSNDHIQYFLYQILRGLKYIHSAN 126 (336)
T ss_pred -----------------------------ccccceEEEEehhcccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 012346799999999999887754 56999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+|||++.++.+||+|||+++........ ........||+.|+|||++.+...++.++|||
T Consensus 127 ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dvw 194 (336)
T cd07849 127 VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDH------------TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIW 194 (336)
T ss_pred eeccCCCHHHEEECCCCCEEECcccceeeccccccc------------cCCcCCcCcCCCccChHHhhCCCCCCcHHHHH
Confidence 999999999999999999999999999764321100 00123357899999999876645689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhh----------------------h----cCCCC--CccccCCHHHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLK----------------------Q----KGELP--PSWVAKFSEQESLLRR 668 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~----------------------~----~~~~p--~~~~~~~~~l~~LI~~ 668 (1196)
||||++|+|++ ||.............. . ....+ ......++++.++|.+
T Consensus 195 slGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 274 (336)
T cd07849 195 SVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDK 274 (336)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHH
Confidence 99999999997 6643322111100000 0 00000 0112345678999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCch
Q 000993 669 LMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||+.||.+|||+.++++|+|+.+..
T Consensus 275 ~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 275 MLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred HcCCChhhCcCHHHHhcCccccccC
Confidence 9999999999999999999998653
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=326.68 Aligned_cols=252 Identities=25% Similarity=0.435 Sum_probs=201.0
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||.|++|.||+|+++.+|+.||||+++.... ......+.+|+.+++.++||||++++++|.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---------- 69 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE-EGTPSTAIREISLMKELKHENIVRLHDVIHT---------- 69 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc-ccchHHHHHHHHHHHhhcCCCEeeeeeeEee----------
Confidence 58999999999999999999999999999999875432 2234567789999999999999999988743
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY---DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~---~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+||||++++|.+++... ..+++..+..++.||+.||+|||+.
T Consensus 70 ------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 119 (284)
T cd07836 70 ------------------------------ENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN 119 (284)
T ss_pred ------------------------------CCcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC
Confidence 3467999999999999888654 3589999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|++||||||+||++++++.++|+|||+++...... .......+|+.|+|||++.+...++.++||
T Consensus 120 ~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv 184 (284)
T cd07836 120 RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV---------------NTFSNEVVTLWYRAPDVLLGSRTYSTSIDI 184 (284)
T ss_pred CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc---------------cccccccccccccChHHhcCCCCCCcHHHH
Confidence 99999999999999999999999999997543211 011234678999999998775567899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhc------------------CCCCC--------ccccCCHHHHHHHHHc
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK------------------GELPP--------SWVAKFSEQESLLRRL 669 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~------------------~~~p~--------~~~~~~~~l~~LI~~c 669 (1196)
|||||++|+|++ ||......+......... ...|. .....++.+.++|.+|
T Consensus 185 ~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 264 (284)
T cd07836 185 WSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRL 264 (284)
T ss_pred HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHH
Confidence 999999999997 665444333222211110 00010 0112356788999999
Q ss_pred ccCCCCCCCCHHHHHhccCC
Q 000993 670 MSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 670 L~~dP~~RPta~eiL~~~~~ 689 (1196)
|+.||.+||++.++++|+||
T Consensus 265 l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 265 LQLNPELRISAHDALQHPWF 284 (284)
T ss_pred hcCCcccCCCHHHHhcCCCC
Confidence 99999999999999999997
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=326.83 Aligned_cols=253 Identities=25% Similarity=0.382 Sum_probs=197.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|.+.+.||+|+||.||+|.++.+|+.||+|.+...... .....+.+|+.+++.++||||+++++++..
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~--------- 74 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE-GVPFTAIREASLLKGLKHANIVLLHDIIHT--------- 74 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC-CCcHHHHHHHHHHHhcCCCCEeEEEEEEec---------
Confidence 6899999999999999999999999999999998754322 223457789999999999999999988632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
....|+||||++++|.+.+.. ...+++..+..++.||+.||+|||++|
T Consensus 75 -------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 123 (291)
T cd07870 75 -------------------------------KETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQH 123 (291)
T ss_pred -------------------------------CCeEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 346799999999888877654 356888899999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+|||++.++.+||+|||+++...... .......+++.|+|||++.+...++.++|||
T Consensus 124 i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 188 (291)
T cd07870 124 ILHRDLKPQNLLISYLGELKLADFGLARAKSIPS---------------QTYSSEVVTLWYRPPDVLLGATDYSSALDIW 188 (291)
T ss_pred cccCCCChHHEEEcCCCcEEEeccccccccCCCC---------------CCCCCccccccccCCceeecCCCCCcHHHHH
Confidence 9999999999999999999999999997532111 0112345789999999987645578899999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHH-HHHhhhcC--------------CC---------CCc------cccCCHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIV-LSDLKQKG--------------EL---------PPS------WVAKFSEQESLL 666 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~-~~~l~~~~--------------~~---------p~~------~~~~~~~l~~LI 666 (1196)
||||++|||++ ||......... .......+ .. +.. .....+.+.+++
T Consensus 189 slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 268 (291)
T cd07870 189 GAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLA 268 (291)
T ss_pred HHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHH
Confidence 99999999997 77544332111 11110000 00 000 011245788999
Q ss_pred HHcccCCCCCCCCHHHHHhccCC
Q 000993 667 RRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 667 ~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
.+||..||.+|||+.+++.|+||
T Consensus 269 ~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 269 SQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred HHHhCcCcccCcCHHHHhcCCCC
Confidence 99999999999999999999997
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=325.46 Aligned_cols=255 Identities=28% Similarity=0.458 Sum_probs=208.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||.|+||.||+|++..+++.||+|++.... .......+.+|+.+++.++||||+++++++.+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 70 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE-AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLK--------- 70 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc-cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEE---------
Confidence 46888999999999999999999999999999987543 23445678899999999999999999988743
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+|+|+||+++ +|.+++... ++++..++.++.||+.||.|||+++
T Consensus 71 -------------------------------~~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~ 118 (274)
T cd06609 71 -------------------------------GSKLWIIMEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEG 118 (274)
T ss_pred -------------------------------CCeEEEEEEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3568999999975 899988765 7999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
++||||+|+||+++.++.++|+|||+++...... .......|++.|+|||.+.+ ..++.++|||
T Consensus 119 i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~-~~~~~~sDv~ 182 (274)
T cd06609 119 KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM---------------SKRNTFVGTPFWMAPEVIKQ-SGYDEKADIW 182 (274)
T ss_pred cccCCCCHHHEEECCCCCEEEcccccceeecccc---------------cccccccCCccccChhhhcc-CCCCchhhHH
Confidence 9999999999999999999999999998654221 01233468899999999987 4589999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCcccc-CCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVA-KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYE 695 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~-~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~~ 695 (1196)
||||++|+|++ ||............... ..+..... .++.+.+++.+||..+|.+|||++++++|+|+......
T Consensus 183 slG~il~~l~tg~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~~ 260 (274)
T cd06609 183 SLGITAIELAKGEPPLSDLHPMRVLFLIPKN--NPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKKT 260 (274)
T ss_pred HHHHHHHHHHhCCCCcccCchHHHHHHhhhc--CCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCcc
Confidence 99999999997 77654443333222221 12211112 56789999999999999999999999999999886543
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=327.60 Aligned_cols=250 Identities=20% Similarity=0.306 Sum_probs=200.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCC-----cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDG-----RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g-----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
+++|++.+.||+|+||.||+|.+...+ ..||+|.++.. ........+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~-~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~--- 79 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKEN-AEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTK--- 79 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccC-CCHHHHHHHHHHHHHHHhcCCcccceEEEEEcC---
Confidence 468899999999999999999987555 68999988643 233445678999999999999999999988732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------------CCCC
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DHFD 517 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~l~ 517 (1196)
....|++|||++ ++|.+++... ..++
T Consensus 80 -------------------------------------~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~ 122 (283)
T cd05048 80 -------------------------------------EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLD 122 (283)
T ss_pred -------------------------------------CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCC
Confidence 345789999997 5999998754 4578
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcccc
Q 000993 518 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 597 (1196)
Q Consensus 518 e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT 597 (1196)
+..++.++.||+.||+|||++|++||||||+||+++.++.+||+|||+++...... .........++
T Consensus 123 ~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~-------------~~~~~~~~~~~ 189 (283)
T cd05048 123 CSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSAD-------------YYRVQSKSLLP 189 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeeccccc-------------cccccCCCccc
Confidence 88999999999999999999999999999999999999999999999997542111 00112334678
Q ss_pred ccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCC
Q 000993 598 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 673 (1196)
Q Consensus 598 ~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~d 673 (1196)
+.|+|||.+.+ ..++.++|||||||++|||++ ||......+.... +. ....++.....++++.+|+++||+.|
T Consensus 190 ~~y~aPE~~~~-~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~-i~-~~~~~~~~~~~~~~~~~l~~~c~~~~ 266 (283)
T cd05048 190 VRWMPPEAILY-GKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEM-IR-SRQLLPCPEDCPARVYALMIECWNEI 266 (283)
T ss_pred ccccCHHHhcc-CcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HH-cCCcCCCcccCCHHHHHHHHHHccCC
Confidence 89999999887 568999999999999999986 7766555443332 22 33334444566789999999999999
Q ss_pred CCCCCCHHHHHhc
Q 000993 674 PSDRPSATELLQD 686 (1196)
Q Consensus 674 P~~RPta~eiL~~ 686 (1196)
|.+||++.+|+++
T Consensus 267 p~~Rp~~~~i~~~ 279 (283)
T cd05048 267 PARRPRFKDIHTR 279 (283)
T ss_pred hhhCcCHHHHHHH
Confidence 9999999999975
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=322.92 Aligned_cols=257 Identities=22% Similarity=0.375 Sum_probs=204.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++.+.||.|+||.||+|.++.+++.|++|++..... ....+.+|+.+++++ .||||++++++|.....
T Consensus 6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~----- 77 (275)
T cd06608 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED---EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNP----- 77 (275)
T ss_pred hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch---hHHHHHHHHHHHHHhcCCCChheEEEEEEecCC-----
Confidence 789999999999999999999998999999999875432 346788999999999 79999999999855310
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh----cCCCCHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
......+|++|||+++ +|.+++.. ...+++..++.++.|++.||+|
T Consensus 78 -----------------------------~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~ 128 (275)
T cd06608 78 -----------------------------PGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAY 128 (275)
T ss_pred -----------------------------CCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 0124678999999975 88888764 3579999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC----C
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW----P 610 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~ 610 (1196)
||+++++|+||+|+||+++.++.+||+|||++....... .......|++.|+|||++... .
T Consensus 129 lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~ 193 (275)
T cd06608 129 LHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTL---------------GRRNTFIGTPYWMAPEVIACDEQPDA 193 (275)
T ss_pred HhcCCcccCCCCHHHEEEccCCeEEECCCccceecccch---------------hhhcCccccccccCHhHhcccccccC
Confidence 999999999999999999999999999999987543211 112335689999999987542 3
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
.++.++|||||||+||+|++ ||..........................+..+++||.+||..||.+|||+.++++||
T Consensus 194 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~ 273 (275)
T cd06608 194 SYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHP 273 (275)
T ss_pred CccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCC
Confidence 47889999999999999997 776554444333333221111111122456889999999999999999999999999
Q ss_pred CC
Q 000993 688 LP 689 (1196)
Q Consensus 688 ~~ 689 (1196)
|.
T Consensus 274 ~~ 275 (275)
T cd06608 274 FI 275 (275)
T ss_pred CC
Confidence 85
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-35 Score=344.36 Aligned_cols=251 Identities=22% Similarity=0.303 Sum_probs=194.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCC-----cEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDG-----RHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g-----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~ 453 (1196)
.++|++.+.||+|+||.||+|++..+| ..||||+++.... ......+.+|+.+++.+ +|||||+++++|.+
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~-- 113 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH-TDEREALMSELKILSHLGQHKNIVNLLGACTH-- 113 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC-HHHHHHHHHHHHHHHhhccCCceeeEeeEecC--
Confidence 368999999999999999999975444 5799999875432 23456788999999999 89999999998733
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-------------------
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY------------------- 513 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~------------------- 513 (1196)
...+|+|||||+ |+|.+++...
T Consensus 114 --------------------------------------~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 155 (374)
T cd05106 114 --------------------------------------GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSS 155 (374)
T ss_pred --------------------------------------CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccc
Confidence 345789999996 5898887532
Q ss_pred ---------------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcc
Q 000993 514 ---------------------------------------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIH 542 (1196)
Q Consensus 514 ---------------------------------------------------~~l~e~~~~~i~~qIa~gL~yLHs~gIiH 542 (1196)
.++++..+++++.||+.||+|||++||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiH 235 (374)
T cd05106 156 DYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIH 235 (374)
T ss_pred cccccchhcccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence 24778889999999999999999999999
Q ss_pred cCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHH
Q 000993 543 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622 (1196)
Q Consensus 543 rDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlG 622 (1196)
|||||+|||++.++++||+|||+++....... ........+++.|||||++.+ ..++.++||||||
T Consensus 236 rDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG 301 (374)
T cd05106 236 RDVAARNVLLTDGRVAKICDFGLARDIMNDSN-------------YVVKGNARLPVKWMAPESIFD-CVYTVQSDVWSYG 301 (374)
T ss_pred ccCchheEEEeCCCeEEEeeceeeeeccCCcc-------------eeeccCCCCccceeCHHHhcC-CCCCccccHHHHH
Confidence 99999999999999999999999975432110 001112345678999999877 5689999999999
Q ss_pred HHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 623 IVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 623 viLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|++|||++ ||............... ...+......++++.++|.+||+.||.+|||+.++++.
T Consensus 302 vil~ellt~G~~Pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~ 368 (374)
T cd05106 302 ILLWEIFSLGKSPYPGILVNSKFYKMVKR-GYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQL 368 (374)
T ss_pred HHHHHHHhCCCCCCccccccHHHHHHHHc-ccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999984 77655443333333322 22222222346799999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=324.88 Aligned_cols=251 Identities=25% Similarity=0.410 Sum_probs=196.2
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCccccCCCC
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
|++.+.||+|+||.||+|.+..+++.||+|+++....... .....+|+.+++++. ||||+++++++.+.
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~-~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~--------- 70 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE-QVNNLREIQALRRLSPHPNILRLIEVLFDR--------- 70 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCch-hhhHHHHHHHHhhcCCCCCccceEEEEecC---------
Confidence 6788999999999999999999999999999875433222 234567899999885 99999999887431
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
....+++||||++++|.+.+... ..+++..++.++.||+.||+|||+.|+
T Consensus 71 -----------------------------~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i 121 (282)
T cd07831 71 -----------------------------KTGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGI 121 (282)
T ss_pred -----------------------------CCCcEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 12467999999999998888754 568999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+||||||+||+++. +.+||+|||+++.+.... ......+++.|+|||++.....++.++||||
T Consensus 122 ~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s 184 (282)
T cd07831 122 FHRDIKPENILIKD-DILKLADFGSCRGIYSKP----------------PYTEYISTRWYRAPECLLTDGYYGPKMDIWA 184 (282)
T ss_pred eecccCHHHEEEcC-CCeEEEecccccccccCC----------------CcCCCCCCcccCChhHhhcCCCCCcchhHHH
Confidence 99999999999999 999999999997643111 1123457899999998765456789999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhc------------------CCCCC--------ccccCCHHHHHHHHHccc
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQK------------------GELPP--------SWVAKFSEQESLLRRLMS 671 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~------------------~~~p~--------~~~~~~~~l~~LI~~cL~ 671 (1196)
|||++|||++ ||................ ...|. .....+.++.++|.+||+
T Consensus 185 lGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 264 (282)
T cd07831 185 VGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLA 264 (282)
T ss_pred HHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhc
Confidence 9999999996 675443322221111100 00111 012345688999999999
Q ss_pred CCCCCCCCHHHHHhccCC
Q 000993 672 PSPSDRPSATELLQDALP 689 (1196)
Q Consensus 672 ~dP~~RPta~eiL~~~~~ 689 (1196)
+||.+||++.++++|+||
T Consensus 265 ~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 265 YDPDERITAKQALRHPYF 282 (282)
T ss_pred cCcccccCHHHHhhCCCC
Confidence 999999999999999996
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-35 Score=324.54 Aligned_cols=253 Identities=29% Similarity=0.448 Sum_probs=205.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|+..+.||.|+||.||+|.++.+++.+|+|.+..... .....++.+|+.+++.++||||+++++.+..
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--------- 70 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN-EAIQKQILRELDILHKCNSPYIVGFYGAFYN--------- 70 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC-hHHHHHHHHHHHHHHHCCCCchhhhheeeec---------
Confidence 468888999999999999999999999999999875433 2455678999999999999999999987732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh-
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHG- 537 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs- 537 (1196)
...+|++|||++ ++|.+++... ..+++..++.++.|++.||+|||+
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~ 119 (265)
T cd06605 71 -------------------------------NGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEK 119 (265)
T ss_pred -------------------------------CCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCC
Confidence 356899999998 5999999876 789999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
.|++|+||||+||+++.++.++|+|||.+....... .....++..|+|||.+.+ ..++.++|
T Consensus 120 ~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~-----------------~~~~~~~~~y~~PE~~~~-~~~~~~~D 181 (265)
T cd06605 120 HKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL-----------------AKTFVGTSSYMAPERIQG-NDYSVKSD 181 (265)
T ss_pred CCeecCCCCHHHEEECCCCCEEEeecccchhhHHHH-----------------hhcccCChhccCHHHHcC-CCCCchhh
Confidence 999999999999999999999999999987653211 011568889999999988 57899999
Q ss_pred hHHHHHHHHHhhc---CCchhH----HHHHHHHHhhhcCCCCCcccc-CCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 618 MYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGELPPSWVA-KFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~----~~~~~~~~l~~~~~~p~~~~~-~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|||||+++|+|++ ||.... .......... ....+..... .++++.++|.+||..||.+|||+.+++.|+||
T Consensus 182 v~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 260 (265)
T cd06605 182 IWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIV-NEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFI 260 (265)
T ss_pred HHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHh-cCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchh
Confidence 9999999999997 665431 1111111111 1112222122 56789999999999999999999999999999
Q ss_pred CCch
Q 000993 690 PQME 693 (1196)
Q Consensus 690 ~~~~ 693 (1196)
++.+
T Consensus 261 ~~~~ 264 (265)
T cd06605 261 KKYE 264 (265)
T ss_pred hccc
Confidence 7653
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-36 Score=319.38 Aligned_cols=264 Identities=23% Similarity=0.393 Sum_probs=205.0
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCC----cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDG----RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.+..|+.+..||+|.||.||+|..+.++ +.||||+++-............||+.+++.++||||+.+..+|+.+
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~-- 99 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH-- 99 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc--
Confidence 4678999999999999999999766443 3799999976544444566788999999999999999998887542
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-----CCCCHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-----DHFDKELAWHLFRQIV 529 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-----~~l~e~~~~~i~~qIa 529 (1196)
...+++++||...+|.++++-. ..++...+..++.||+
T Consensus 100 -------------------------------------d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil 142 (438)
T KOG0666|consen 100 -------------------------------------DKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQIL 142 (438)
T ss_pred -------------------------------------CceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHH
Confidence 4578999999999999998532 3588999999999999
Q ss_pred HHHHHHHhCCCcccCCCcCcEEecCC----CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchh
Q 000993 530 EGLAHIHGQGIIHRDLTPNNIFFDAR----NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 605 (1196)
Q Consensus 530 ~gL~yLHs~gIiHrDLKp~NILld~~----~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 605 (1196)
.|+.|||++-|+||||||.|||+..+ |.|||+|||+|+.+..+-.. . ......+-|.+|.|||.
T Consensus 143 ~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkp------l------~s~d~VVVTiWYRAPEL 210 (438)
T KOG0666|consen 143 DGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKP------L------ASLDPVVVTIWYRAPEL 210 (438)
T ss_pred hhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccc------c------ccCCceEEEEEecChHH
Confidence 99999999999999999999999888 89999999999987644211 1 12234578999999999
Q ss_pred ccCCCCCCCcchhHHHHHHHHHhhc--CCchhHH-------------HHHHHH------------------------Hhh
Q 000993 606 EQGWPKIDEKADMYSLGIVFFELWH--PFSTAME-------------RQIVLS------------------------DLK 646 (1196)
Q Consensus 606 l~~~~~~s~ksDVwSlGviLyELlt--Pf~~~~~-------------~~~~~~------------------------~l~ 646 (1196)
|.|...|+++.||||.|||+.||++ |.....+ ....+. ...
T Consensus 211 LLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~ 290 (438)
T KOG0666|consen 211 LLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFR 290 (438)
T ss_pred hcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhH
Confidence 9998899999999999999999986 3211110 000010 000
Q ss_pred hcCCCCC-------ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 647 QKGELPP-------SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 647 ~~~~~p~-------~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
.....+. .+...++...+|+.+||+.||.+|.|++++|+|++|...+
T Consensus 291 ~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~ 344 (438)
T KOG0666|consen 291 RHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDP 344 (438)
T ss_pred HhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCC
Confidence 0000000 0111234467899999999999999999999999988653
|
|
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=318.43 Aligned_cols=249 Identities=30% Similarity=0.547 Sum_probs=204.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|+..+.||+|+||.||+|.+..+++.+|||.+............+.+|+.+++.++||||+++++.+..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---------- 70 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLE---------- 70 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEec----------
Confidence 5889999999999999999999999999999998665555566789999999999999999999977632
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+++||||+++ +|.+++... ..+++..++.++.|++.||+|||++
T Consensus 71 ------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~ 120 (256)
T cd08220 71 ------------------------------DKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK 120 (256)
T ss_pred ------------------------------CCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3567999999975 999999764 3589999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCC-CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 539 GIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
|++||||||+||+++.++ .+||+|||++....... ......|++.|+|||.+.+ ..++.++|
T Consensus 121 ~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~D 183 (256)
T cd08220 121 LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS----------------KAYTVVGTPCYISPELCEG-KPYNQKSD 183 (256)
T ss_pred CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc----------------cccccccCCcccCchhccC-CCCCcccc
Confidence 999999999999998654 58999999998653211 1123468899999999987 56889999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|||||+++|+|++ ||............... ..++.....++++.+++.+||+.||.+|||+.++++|||+
T Consensus 184 v~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 184 IWALGCVLYELASLKRAFEAANLPALVLKIMSG--TFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred hHHHHHHHHHHHhCCCCcccCchHHHHHHHHhc--CCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 9999999999997 77665544444333322 2222233456789999999999999999999999999985
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=336.72 Aligned_cols=263 Identities=25% Similarity=0.338 Sum_probs=206.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|.+.+.||+|+||.||+|++..+|+.||||.+............+.+|+.+++.++||||+++++++....
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~------ 77 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPH------ 77 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheeccc------
Confidence 35799999999999999999999999999999998754433344556788999999999999999998764321
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
......+|++|||++++|.+++.....+++..++.++.||+.||.|||+++
T Consensus 78 -----------------------------~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ 128 (337)
T cd07858 78 -----------------------------REAFNDVYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSAN 128 (337)
T ss_pred -----------------------------ccccCcEEEEEeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 011245799999999999999988888999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
++||||||+||+++.++.+||+|||+++...... .......++..|+|||.+.....++.++|||
T Consensus 129 i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diw 193 (337)
T cd07858 129 VLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG---------------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVW 193 (337)
T ss_pred EecCCCCHHHEEEcCCCCEEECcCccccccCCCc---------------ccccccccccCccChHHHhcCCCCCCcccHH
Confidence 9999999999999999999999999997543211 0112346789999999887544589999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHH-----------------------hhhcCCC-----CCccccCCHHHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSD-----------------------LKQKGEL-----PPSWVAKFSEQESLLRR 668 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~-----------------------l~~~~~~-----p~~~~~~~~~l~~LI~~ 668 (1196)
||||++|+|++ ||............ ....... .......++++.++|++
T Consensus 194 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 273 (337)
T cd07858 194 SVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEK 273 (337)
T ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHH
Confidence 99999999996 66432211110000 0000000 01123456788999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCc
Q 000993 669 LMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||+.||.+|||+.++++|+|+...
T Consensus 274 ~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 274 MLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred HhcCChhhccCHHHHHcCcchhhh
Confidence 999999999999999999999754
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=321.49 Aligned_cols=250 Identities=25% Similarity=0.476 Sum_probs=199.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+++|++.+.||+|+||.||+|+++.+++.||||.++... ........+.+|+.+++.++||||+++++++..
T Consensus 1 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 73 (267)
T cd08228 1 LANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIE------- 73 (267)
T ss_pred CcceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEE-------
Confidence 368999999999999999999999999999999887533 233445678899999999999999999988743
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
....|++|||++ ++|.+++.. ...+++..++.++.||+.||+
T Consensus 74 ---------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 120 (267)
T cd08228 74 ---------------------------------DNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVE 120 (267)
T ss_pred ---------------------------------CCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHH
Confidence 346799999997 488887753 345899999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++|++||||||+||+++.++.++|+|||++....... .......|++.|+|||.+.+ ..++
T Consensus 121 ~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~-~~~~ 184 (267)
T cd08228 121 HMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT---------------TAAHSLVGTPYYMSPERIHE-NGYN 184 (267)
T ss_pred HHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchh---------------HHHhcCCCCccccChhhhcc-CCCC
Confidence 9999999999999999999999999999999987653211 01123468899999999987 5688
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHH-HHHHHHhhhcCCCCCc-cccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMER-QIVLSDLKQKGELPPS-WVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~-~~~~~~l~~~~~~p~~-~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++|+||||+++|||++ ||...... ......+. ....++. ....+..+.++|.+||+.+|.+||++.++++.
T Consensus 185 ~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~ 261 (267)
T cd08228 185 FKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIE-QCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI 261 (267)
T ss_pred chhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHh-cCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence 99999999999999997 66543221 12222222 2223332 22455689999999999999999999999974
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=336.03 Aligned_cols=256 Identities=27% Similarity=0.452 Sum_probs=206.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
-..|+++++||+||.++||++... +.+.||+|++.....+.....-+.+|+..|.+| .|.+||++|++=+
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv-------- 430 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEV-------- 430 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeec--------
Confidence 357999999999999999999876 567788888776666667778899999999999 6999999997631
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCH-HHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDK-ELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e-~~~~~i~~qIa~gL~yLHs 537 (1196)
...++|+||||-+.+|..+|++...... -..+.|..|++.++.++|.
T Consensus 431 --------------------------------~d~~lYmvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~ 478 (677)
T KOG0596|consen 431 --------------------------------TDGYLYMVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQ 478 (677)
T ss_pred --------------------------------cCceEEEEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHH
Confidence 2568999999999999999998765433 4788899999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC-------
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP------- 610 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------- 610 (1196)
+||||-||||.|+|+- .|.+||+|||+|..+..+. .++...+.+||+.|||||++....
T Consensus 479 ~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DT-------------TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~ 544 (677)
T KOG0596|consen 479 HGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDT-------------TSIVKDSQVGTVNYMSPEALTDMSSSRENGK 544 (677)
T ss_pred hceeecCCCcccEEEE-eeeEEeeeechhcccCccc-------------cceeeccccCcccccCHHHHhhccccccCCC
Confidence 9999999999999885 5899999999998764332 234456789999999999985411
Q ss_pred ---CCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhc-C--CCCCccccCCHHHHHHHHHcccCCCCCCCCHH
Q 000993 611 ---KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK-G--ELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT 681 (1196)
Q Consensus 611 ---~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~-~--~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ 681 (1196)
..+.++||||||||||+|++ ||....+....+..+... . .+|.. +. ..++.++++.||+.||.+||++.
T Consensus 545 ~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~-~~-~~~li~~mK~CL~rdPkkR~si~ 622 (677)
T KOG0596|consen 545 SKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDI-PE-NDELIDVMKCCLARDPKKRWSIP 622 (677)
T ss_pred cceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCC-CC-chHHHHHHHHHHhcCcccCCCcH
Confidence 15679999999999999994 888776555555444422 1 12222 12 12489999999999999999999
Q ss_pred HHHhccCCCCc
Q 000993 682 ELLQDALPPQM 692 (1196)
Q Consensus 682 eiL~~~~~~~~ 692 (1196)
++|+|||....
T Consensus 623 eLLqhpFl~~~ 633 (677)
T KOG0596|consen 623 ELLQHPFLQIQ 633 (677)
T ss_pred HHhcCcccccc
Confidence 99999987763
|
|
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=324.02 Aligned_cols=256 Identities=21% Similarity=0.389 Sum_probs=201.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+.|++.+.||.|+||.||+|.+..+++.+|+|++.... .....+..|+.+++.+ +||||++++++|+....
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~----- 87 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE---DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSP----- 87 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh---HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccc-----
Confidence 67889999999999999999999999999999986432 2345688899999998 79999999988753210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
......+|++||||++ +|.+++... ..+++..++.++.||+.||+|||
T Consensus 88 -----------------------------~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH 138 (282)
T cd06636 88 -----------------------------PGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLH 138 (282)
T ss_pred -----------------------------cCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0124578999999975 899888653 45889999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC----CCCC
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKI 612 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~ 612 (1196)
++||+||||||+||+++.++.++|+|||++....... .......|++.|+|||++.. ...+
T Consensus 139 ~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~l~~~~~~~~~~ 203 (282)
T cd06636 139 AHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV---------------GRRNTFIGTPYWMAPEVIACDENPDATY 203 (282)
T ss_pred HCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhccc---------------cCCCcccccccccCHhhcCcccCcCcCC
Confidence 9999999999999999999999999999987542111 01133568999999998753 2357
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
+.++|+|||||++|||++ ||....+......... ...........++++.+||.+||+.||.+||++.++++|+|+
T Consensus 204 ~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 204 DYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-NPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred CcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhh-CCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 889999999999999996 7765544333222211 111111223456789999999999999999999999999996
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=327.61 Aligned_cols=254 Identities=23% Similarity=0.416 Sum_probs=202.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++++.||+|+||.||+|++..+|+.||+|.++... .......+.+|+.+++.++||||+++++++..
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--------- 70 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL-DESKFNQIIMELDILHKAVSPYIVDFYGAFFI--------- 70 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHhcCCCcHHhhhhheec---------
Confidence 47889999999999999999999999999999987532 33345678999999999999999999987632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY---DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~---~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+|||||++ +|..++... ..+++..+..++.||+.||.|||
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH 119 (286)
T cd06622 71 -------------------------------EGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLK 119 (286)
T ss_pred -------------------------------CCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4578999999975 888887653 37999999999999999999999
Q ss_pred h-CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC-----
Q 000993 537 G-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP----- 610 (1196)
Q Consensus 537 s-~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----- 610 (1196)
+ .+|+||||||+||+++.++.+||+|||++..+... ......+++.|+|||.+.+..
T Consensus 120 ~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~~~~~~~~ 182 (286)
T cd06622 120 EEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS-----------------LAKTNIGCQSYMAPERIKSGGPNQNP 182 (286)
T ss_pred hcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC-----------------ccccCCCccCccCcchhcCCCCCccC
Confidence 7 59999999999999999999999999998754211 112346888999999986522
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHh-hhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDL-KQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l-~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++.++|+|||||++|+|++ ||............. ......+..+...++++.++|.+||+.+|.+||++.++++|
T Consensus 183 ~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 183 TYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred CCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 35889999999999999997 775443322221111 11222233333466789999999999999999999999999
Q ss_pred cCCCCc
Q 000993 687 ALPPQM 692 (1196)
Q Consensus 687 ~~~~~~ 692 (1196)
+|+...
T Consensus 263 ~~~~~~ 268 (286)
T cd06622 263 PWLVKY 268 (286)
T ss_pred hhhhhc
Confidence 998654
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=326.26 Aligned_cols=255 Identities=29% Similarity=0.453 Sum_probs=201.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||.|+||.||+|.++.+++.||||+++...........+.+|+.+++.++||||+++++++..
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------- 71 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR--------- 71 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE---------
Confidence 47899999999999999999999999999999987655444456788999999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHH-HhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQV-FESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~-l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+|++|||+++++.+. ..+...+++.+++.++.||+.||+|||+++
T Consensus 72 -------------------------------~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 120 (288)
T cd07833 72 -------------------------------KGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHN 120 (288)
T ss_pred -------------------------------CCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 346899999998765554 445567999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
++||||+|+||+++.++.+||+|||++........ .......++..|+|||++.+...++.++|+|
T Consensus 121 i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~--------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~ 186 (288)
T cd07833 121 IIHRDIKPENILVSESGVLKLCDFGFARALRARPA--------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVW 186 (288)
T ss_pred eecCCCCHHHeEECCCCCEEEEeeecccccCCCcc--------------ccccCcccccCCcCCchhcCCCCcCchhhHH
Confidence 99999999999999999999999999986532210 0113356889999999998854789999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcC-------------------CCCC---------ccc-cCCHHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKG-------------------ELPP---------SWV-AKFSEQESLLR 667 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~-------------------~~p~---------~~~-~~~~~l~~LI~ 667 (1196)
|||+++|+|++ ||................+ ..++ ... ..++++.+||+
T Consensus 187 slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 266 (288)
T cd07833 187 AIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLK 266 (288)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHH
Confidence 99999999997 5544332222111110000 0000 001 12567899999
Q ss_pred HcccCCCCCCCCHHHHHhccCC
Q 000993 668 RLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
+||..+|++|||+.++++|+||
T Consensus 267 ~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 267 ACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred HHhccCchhcccHHHHhcCCCC
Confidence 9999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-34 Score=323.41 Aligned_cols=258 Identities=25% Similarity=0.408 Sum_probs=202.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.++|.+.+.||+|+||.||+|.++.+++.+|+|++.... .....+.+|+.+++.+ +||||++++++|.....
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~---- 93 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS---DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADK---- 93 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc---cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccc----
Confidence 478999999999999999999999999999999986432 2345678899999999 89999999998854210
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
.....+|+||||++ ++|.+++.. ...+++..++.++.|++.||+
T Consensus 94 -------------------------------~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~ 142 (291)
T cd06639 94 -------------------------------LVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQ 142 (291)
T ss_pred -------------------------------cCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHH
Confidence 11346899999996 489888753 456899999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC---
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP--- 610 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--- 610 (1196)
|||+.+++||||||+||+++.++.+||+|||++....... .......|+..|+|||++....
T Consensus 143 ~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~ 207 (291)
T cd06639 143 HLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR---------------LRRNTSVGTPFWMAPEVIACEQQYD 207 (291)
T ss_pred HHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhccccc---------------ccccCccCCccccChhhhcCCCCcc
Confidence 9999999999999999999999999999999987643211 0112346889999999986522
Q ss_pred -CCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 611 -KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 611 -~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++.++|||||||++|||++ ||.............................+.+||.+||+.+|.+||++.++++|
T Consensus 208 ~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 208 YSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred cccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 26889999999999999997 67655443333332221111111122345678999999999999999999999999
Q ss_pred cCCC
Q 000993 687 ALPP 690 (1196)
Q Consensus 687 ~~~~ 690 (1196)
+||+
T Consensus 288 ~~~~ 291 (291)
T cd06639 288 PFIK 291 (291)
T ss_pred cccC
Confidence 9984
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=331.44 Aligned_cols=249 Identities=24% Similarity=0.354 Sum_probs=197.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcE----EEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRH----YAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~----vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
..+|++.+.||+|+||.||+|++..++.. ||+|+++.. ......+++.+|+.+++.++||||++++++|..
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~---- 80 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLT---- 80 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC----
Confidence 36899999999999999999998766654 899988632 233455678999999999999999999998732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~ 533 (1196)
...++++||++ |+|.+++... ..+++..++.++.||+.||+
T Consensus 81 -------------------------------------~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~ 123 (316)
T cd05108 81 -------------------------------------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 123 (316)
T ss_pred -------------------------------------CCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHH
Confidence 12478999996 6899988764 46889999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+|||++.++.+||+|||+++....... ........++..|+|||++.+ ..++
T Consensus 124 ~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-------------~~~~~~~~~~~~y~apE~~~~-~~~~ 189 (316)
T cd05108 124 YLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEK-------------EYHAEGGKVPIKWMALESILH-RIYT 189 (316)
T ss_pred HHHhcCeeccccchhheEecCCCcEEEccccccccccCCCc-------------ceeccCCccceeecChHHhcc-CCCC
Confidence 99999999999999999999999999999999986532210 011122345778999999987 5689
Q ss_pred CcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++|||||||++|||++ ||......+. ..... ....++.....+.++.+++.+||..||.+||++.+++.+
T Consensus 190 ~~~Di~slGv~l~el~t~g~~p~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 190 HQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILE-KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred chhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHh-CCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 99999999999999874 6655433332 22222 333333334556789999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-34 Score=317.48 Aligned_cols=257 Identities=33% Similarity=0.498 Sum_probs=206.5
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|.+.+.||+|+||.||+|.+..+++.||+|.++...........+.+|+.+++.++||||+++++.+.
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~----------- 69 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEV----------- 69 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEe-----------
Confidence 478889999999999999999989999999999866554456778999999999999999999998752
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
....+++++||++ ++|.+++.....+++..++.++.||+.||+|||++|+
T Consensus 70 -----------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i 120 (264)
T cd06626 70 -----------------------------HREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGI 120 (264)
T ss_pred -----------------------------cCCEEEEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCc
Confidence 2356799999997 5999999887779999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC--CCCCcchh
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP--KIDEKADM 618 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~~s~ksDV 618 (1196)
+|+||+|+||+++.++.+||+|||++.......... ........+++.|+|||++.+.. .++.++||
T Consensus 121 ~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv 189 (264)
T cd06626 121 VHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM-----------GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADI 189 (264)
T ss_pred ccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc-----------cccccCCcCCcCccChhhccCCCCCCCCcccch
Confidence 999999999999999999999999998654322110 00012346889999999988732 27899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhh-cCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQ-KGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~-~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
||||+++|+|++ ||............... .....+.+...++.+.++|++||+.+|.+|||+.+++.|+|+
T Consensus 190 ~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 190 WSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred HHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 999999999996 77654332222222221 111122333346789999999999999999999999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=322.31 Aligned_cols=249 Identities=23% Similarity=0.366 Sum_probs=204.7
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
+|++.+.||.|+||.||+|++..+++.||+|++...... ....+.+.+|+.++++++||||+++++++.
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---------- 70 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQ---------- 70 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhc----------
Confidence 588999999999999999999999999999999754432 245678999999999999999999987762
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
....+|+||||+.+ +|.+++.....+++..+..++.||+.||.|||++|
T Consensus 71 ------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~ 120 (258)
T cd05578 71 ------------------------------DEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKG 120 (258)
T ss_pred ------------------------------CCCeEEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 24578999999964 99999987778999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
++|+||||+||+++.++.++|+|||++....... ......|+..|+|||.+.+ ..++.++|+|
T Consensus 121 i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~----------------~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~ 183 (258)
T cd05578 121 IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT----------------LTTSTSGTPGYMAPEVLCR-QGYSVAVDWW 183 (258)
T ss_pred eeccCCCHHHeEEcCCCCEEEeecccccccCCCc----------------cccccCCChhhcCHHHHcc-cCCCCcccch
Confidence 9999999999999999999999999987643211 1123468889999999987 4589999999
Q ss_pred HHHHHHHHhhc---CCchhHH--HHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH--HHHHhccCC
Q 000993 620 SLGIVFFELWH---PFSTAME--RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA--TELLQDALP 689 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~--~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta--~eiL~~~~~ 689 (1196)
|||+++|+|++ ||..... .......... ..+......+..+.++|.+||+.||.+||++ .++++|+||
T Consensus 184 slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 184 SLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET--ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred hhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc--ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 99999999996 7665442 2222222221 2222223455789999999999999999999 999999997
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=317.44 Aligned_cols=250 Identities=30% Similarity=0.454 Sum_probs=204.8
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC---CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK---SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~---~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
|+..+.||+|+||+||+|.+..+++.|++|.+..... .......+.+|+.+++.++||||+++++++.
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~--------- 72 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTER--------- 72 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEe---------
Confidence 5667899999999999999998999999999876442 2334567899999999999999999998763
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....+|++|||+++ +|.+++.....+++..++.++.||+.||+|||++
T Consensus 73 -------------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 121 (258)
T cd06632 73 -------------------------------EEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDR 121 (258)
T ss_pred -------------------------------cCCeEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 23567999999975 9999998887899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|++|+||+|+||+++.++.+||+|||++....... ......|++.|+|||.+.....++.++|+
T Consensus 122 ~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~----------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~ 185 (258)
T cd06632 122 NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS----------------FAKSFKGSPYWMAPEVIAQQGGYGLAADI 185 (258)
T ss_pred CcccCCCCHHHEEECCCCCEEEccCccceeccccc----------------cccccCCCcceeCHHHhcCCCCCCchhhh
Confidence 99999999999999999999999999987643211 11335688999999998763338899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|||||++|+|++ ||.............. ....+......++.+.+++++||+.+|.+||++.++++|+|+
T Consensus 186 ~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 186 WSLGCTVLEMATGKPPWSQLEGVAAVFKIGR-SKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred HHHHHHHHHHHhCCCCcccCcHHHHHHHHHh-cccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 999999999996 7765554333333222 123333334456789999999999999999999999999985
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=311.64 Aligned_cols=257 Identities=27% Similarity=0.424 Sum_probs=208.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+++.+.+..||.|+.|.||+++++.+|..+|||.+.... +.+...+++..+.++... +.|+||+.+|+|+.
T Consensus 91 indl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~-Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~------- 162 (391)
T KOG0983|consen 91 INDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG-NKEENKRILMDLDVVLKSHDCPYIVQCFGYFIT------- 162 (391)
T ss_pred hHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccC-CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEee-------
Confidence 467788889999999999999999999999999998554 445677888888877665 48999999999964
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...++|.||.|...+..++.+ .++++|..+-++...++.||.||..
T Consensus 163 ---------------------------------n~dV~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKe 209 (391)
T KOG0983|consen 163 ---------------------------------NTDVFICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKE 209 (391)
T ss_pred ---------------------------------CchHHHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHH
Confidence 234578999998777776654 4679999999999999999999986
Q ss_pred C-CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--CCCCCC
Q 000993 538 Q-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDE 614 (1196)
Q Consensus 538 ~-gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~s~ 614 (1196)
+ ||||||+||+|||+|..|++||||||++-++... ..++...|.+.|||||.+.. .+.|+.
T Consensus 210 KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS----------------kAhtrsAGC~~YMaPERidp~~~~kYDi 273 (391)
T KOG0983|consen 210 KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS----------------KAHTRSAGCAAYMAPERIDPPDKPKYDI 273 (391)
T ss_pred hcceeecccCccceEEccCCCEEeecccccceeecc----------------cccccccCCccccCccccCCCCCCccch
Confidence 4 7999999999999999999999999999876432 22455679999999999864 356999
Q ss_pred cchhHHHHHHHHHhhc---CCchhHH-HHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAME-RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~-~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
++|||||||+|+||.| ||..-.. -+..-+++...+...+.....++.+++|+..||++|+.+||...++|+|+|..
T Consensus 274 RaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~ 353 (391)
T KOG0983|consen 274 RADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIK 353 (391)
T ss_pred hhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCccee
Confidence 9999999999999997 7776433 33333444333322233344678999999999999999999999999999876
Q ss_pred Cch
Q 000993 691 QME 693 (1196)
Q Consensus 691 ~~~ 693 (1196)
..+
T Consensus 354 ~ye 356 (391)
T KOG0983|consen 354 RYE 356 (391)
T ss_pred ecc
Confidence 553
|
|
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=328.62 Aligned_cols=254 Identities=23% Similarity=0.391 Sum_probs=204.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
..+|.+++.||.|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.+++.++||||++++++|..
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-------- 87 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLV-------- 87 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEec--------
Confidence 3789999999999999999999999999999999875433 234668899999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+||||++ ++|.+++.. ..+++.++..++.|++.||.|||+.
T Consensus 88 --------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~ 134 (297)
T cd06656 88 --------------------------------GDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSN 134 (297)
T ss_pred --------------------------------CCEEEEeecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 356899999997 488888754 4688999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|++||||||+|||++.++.++|+|||++....... .......+++.|+|||.+.+ ..++.++|+
T Consensus 135 ~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di 198 (297)
T cd06656 135 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---------------SKRSTMVGTPYWMAPEVVTR-KAYGPKVDI 198 (297)
T ss_pred CcccCCCCHHHEEECCCCCEEECcCccceEccCCc---------------cCcCcccCCccccCHHHHcC-CCCCcHHHH
Confidence 99999999999999999999999999987542211 01123468899999999987 568899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|||||++|+|++ ||..........................++.+++|+.+||..||.+||++.++++|+|+...
T Consensus 199 ~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 275 (297)
T cd06656 199 WSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLA 275 (297)
T ss_pred HHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccc
Confidence 999999999997 77654433222222111111111223455678999999999999999999999999998754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=334.49 Aligned_cols=248 Identities=24% Similarity=0.360 Sum_probs=209.5
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSG 466 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g 466 (1196)
++||.|.||+||-|+++.+|+.||||+|.+-.-......++.+|+.+|..+.||.||.+-..|
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~----------------- 632 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMF----------------- 632 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEee-----------------
Confidence 579999999999999999999999999976554445567899999999999999999987554
Q ss_pred cccccccccccccccccccccccccccEEEEEeeecCCCHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccC
Q 000993 467 TLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE--SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544 (1196)
Q Consensus 467 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~--~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrD 544 (1196)
+....+|+|||-+.|++...+- +.+++++.....++.||+.||.|||-++|+|.|
T Consensus 633 -----------------------ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCD 689 (888)
T KOG4236|consen 633 -----------------------ETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCD 689 (888)
T ss_pred -----------------------cCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeecc
Confidence 2367899999999998777663 456899999999999999999999999999999
Q ss_pred CCcCcEEecCC---CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHH
Q 000993 545 LTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621 (1196)
Q Consensus 545 LKp~NILld~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSl 621 (1196)
|||+|||+.+. ..+||||||+|+.+.... ...+.+|||+|+|||+|+. ..|+..-||||.
T Consensus 690 LKPENVLLas~~~FPQvKlCDFGfARiIgEks----------------FRrsVVGTPAYLaPEVLrn-kGyNrSLDMWSV 752 (888)
T KOG4236|consen 690 LKPENVLLASASPFPQVKLCDFGFARIIGEKS----------------FRRSVVGTPAYLAPEVLRN-KGYNRSLDMWSV 752 (888)
T ss_pred CCchheeeccCCCCCceeeccccceeecchhh----------------hhhhhcCCccccCHHHHhh-ccccccccceee
Confidence 99999999764 469999999999876443 2356799999999999998 569999999999
Q ss_pred HHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 622 GIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 622 GviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
|||+|--++ ||....+-.. ++......+|+ .|..+++++.+||..+|+..-.+|.|.+..|.|+|.+...
T Consensus 753 GVIiYVsLSGTFPFNEdEdInd--QIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq 826 (888)
T KOG4236|consen 753 GVIIYVSLSGTFPFNEDEDIND--QIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQ 826 (888)
T ss_pred eEEEEEEecccccCCCccchhH--HhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcch
Confidence 999998885 7765443322 22223344554 7888999999999999999999999999999999998864
|
|
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-34 Score=316.88 Aligned_cols=247 Identities=30% Similarity=0.550 Sum_probs=201.4
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||.|+||.||++.++.+++.||+|.++.... ....+.+.+|+.+++.++||||+++++++..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------- 69 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS-SSAVEDSRKEAVLLAKMKHPNIVAFKESFEA---------- 69 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc-hHHHHHHHHHHHHHHhCCCCCcceEEEEEEE----------
Confidence 58899999999999999999999999999999875432 3345678899999999999999999988732
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|++|||++ ++|.+++.. ...++++.++.++.||+.||.|||++
T Consensus 70 ------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~ 119 (255)
T cd08219 70 ------------------------------DGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK 119 (255)
T ss_pred ------------------------------CCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 457899999997 589888864 34589999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+|+||||+||+++.++.++|+|||+++...... .......|++.|+|||++.+ ..++.++|+
T Consensus 120 ~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv 183 (255)
T cd08219 120 RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG---------------AYACTYVGTPYYVPPEIWEN-MPYNNKSDI 183 (255)
T ss_pred CcccCCCCcceEEECCCCcEEEcccCcceeecccc---------------cccccccCCccccCHHHHcc-CCcCchhhh
Confidence 99999999999999999999999999987543211 01123468999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
||||+++|+|++ ||............. ....++.....+..+.++|.+||+.||.+||++.+++...
T Consensus 184 ~slG~i~~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~ 253 (255)
T cd08219 184 WSLGCILYELCTLKHPFQANSWKNLILKVC--QGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSRG 253 (255)
T ss_pred hhhchhheehhhccCCCCCCCHHHHHHHHh--cCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhcc
Confidence 999999999996 776655444433332 2223333334567899999999999999999999998753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-34 Score=317.48 Aligned_cols=254 Identities=30% Similarity=0.481 Sum_probs=209.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||.|++|.||+|.+..+++.||||++...... .....+.+|+..++.++||||+++++++..
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------- 70 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYK--------- 70 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEcc---------
Confidence 4789999999999999999999999999999998765432 456789999999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh-C
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-Q 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs-~ 538 (1196)
...+|++|||++ ++|.+++.....+++..++.++.||+.||+|||+ +
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~ 119 (264)
T cd06623 71 -------------------------------EGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKR 119 (264)
T ss_pred -------------------------------CCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccC
Confidence 356899999998 6999999888889999999999999999999999 9
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
+++||||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+ ..++.++|+
T Consensus 120 ~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~---------------~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv 183 (264)
T cd06623 120 HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL---------------DQCNTFVGTVTYMSPERIQG-ESYSYAADI 183 (264)
T ss_pred CCccCCCCHHHEEECCCCCEEEccCccceecccCC---------------CcccceeecccccCHhhhCC-CCCCchhhH
Confidence 99999999999999999999999999987653211 01123468899999999887 578999999
Q ss_pred HHHHHHHHHhhc---CCchhH--HHHHHHHHhhhcCCCCCcccc-CCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 619 YSLGIVFFELWH---PFSTAM--ERQIVLSDLKQKGELPPSWVA-KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~--~~~~~~~~l~~~~~~p~~~~~-~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||||+++|+|++ ||.... ........+. ....+..... .+..+.++|.+||..+|++||++.++++|+|++..
T Consensus 184 ~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 184 WSLGLTLLECALGKFPFLPPGQPSFFELMQAIC-DGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred HHHHHHHHHHHhCCCCCccccccCHHHHHHHHh-cCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 999999999997 665553 2222222222 2222322233 56789999999999999999999999999998654
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=322.46 Aligned_cols=255 Identities=27% Similarity=0.440 Sum_probs=202.6
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCc
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 462 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~ 462 (1196)
|++.+.||.|+||.||+|.+..+|+.+|+|++............+.+|+.+++.++|||++++++++...
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---------- 70 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSK---------- 70 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecC----------
Confidence 6788999999999999999998999999999986543334456788999999999999999999887321
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCc
Q 000993 463 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGII 541 (1196)
Q Consensus 463 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~gIi 541 (1196)
....+|+||||++++|.+++... ..+++..++.++.||+.||+|||++|++
T Consensus 71 ----------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~ 122 (287)
T cd07840 71 ----------------------------GKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGIL 122 (287)
T ss_pred ----------------------------CCCcEEEEeccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 02568999999999999988765 5799999999999999999999999999
Q ss_pred ccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHH
Q 000993 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621 (1196)
Q Consensus 542 HrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSl 621 (1196)
|+||||+||++++++.+||+|||++........ ...+...++..|+|||.+.+...++.++|||||
T Consensus 123 h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~--------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~sl 188 (287)
T cd07840 123 HRDIKGSNILINNDGVLKLADFGLARPYTKRNS--------------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSV 188 (287)
T ss_pred eccCcHHHeEEcCCCCEEEccccceeeccCCCc--------------ccccccccccccCCceeeEccccCChHHHHHHH
Confidence 999999999999999999999999986532210 012234678899999988765568899999999
Q ss_pred HHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC---------------------------Ccccc-CCHHHHHHHHHcc
Q 000993 622 GIVFFELWH---PFSTAMERQIVLSDLKQKGELP---------------------------PSWVA-KFSEQESLLRRLM 670 (1196)
Q Consensus 622 GviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p---------------------------~~~~~-~~~~l~~LI~~cL 670 (1196)
|+++|||++ ||...................+ ..... .++.+.++|++||
T Consensus 189 G~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 268 (287)
T cd07840 189 GCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLL 268 (287)
T ss_pred HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHc
Confidence 999999997 6655443322222111100000 00111 1567889999999
Q ss_pred cCCCCCCCCHHHHHhccCC
Q 000993 671 SPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~~~~ 689 (1196)
+.+|.+||++.++++|+||
T Consensus 269 ~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 269 TLDPKKRISADQALQHEYF 287 (287)
T ss_pred CCChhhCcCHHHHhhCcCC
Confidence 9999999999999999996
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=334.20 Aligned_cols=265 Identities=28% Similarity=0.390 Sum_probs=210.2
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|.+.+.||.|+||.||+|++..+|+.||||++............+.+|+.+++.++||||+++++++.....
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~------- 73 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSP------- 73 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCc-------
Confidence 4888999999999999999999889999999987554434556789999999999999999999987643210
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCc
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 541 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIi 541 (1196)
.....+|++|+|++++|.+++.....+++..++.++.||+.||+|||++||+
T Consensus 74 ----------------------------~~~~~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~ 125 (330)
T cd07834 74 ----------------------------EDFNDVYIVTELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVI 125 (330)
T ss_pred ----------------------------ccccceEEEecchhhhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 1124679999999999999998878899999999999999999999999999
Q ss_pred ccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHH
Q 000993 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621 (1196)
Q Consensus 542 HrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSl 621 (1196)
||||||+|||++.++.++|+|||++......... ........+|+.|+|||++.+...++.++|+|||
T Consensus 126 H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~sl 193 (330)
T cd07834 126 HRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE------------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSV 193 (330)
T ss_pred cCCCCHHHEEEcCCCCEEEcccCceEeecccccc------------cccccccccccCcCCceeeecccCCCcchhHHHH
Confidence 9999999999999999999999999865322100 0112345689999999999885478999999999
Q ss_pred HHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC----------------------------ccccCCHHHHHHHHHcc
Q 000993 622 GIVFFELWH---PFSTAMERQIVLSDLKQKGELPP----------------------------SWVAKFSEQESLLRRLM 670 (1196)
Q Consensus 622 GviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~----------------------------~~~~~~~~l~~LI~~cL 670 (1196)
|+++|+|++ ||......+.........+..++ .....++++.++|.+||
T Consensus 194 G~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 273 (330)
T cd07834 194 GCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKML 273 (330)
T ss_pred HHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHc
Confidence 999999997 66544433322222111111000 11224567899999999
Q ss_pred cCCCCCCCCHHHHHhccCCCCch
Q 000993 671 SPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
+.+|.+||++.++++|+||.+..
T Consensus 274 ~~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 274 VFDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred cCChhhCCCHHHHHhCccHHhhc
Confidence 99999999999999999998754
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=326.39 Aligned_cols=256 Identities=26% Similarity=0.365 Sum_probs=200.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|...+.||+|+||.||++.+..+++.||+|.+...... .....+.+|+.++.++. ||||+++++++..
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~-------- 74 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFR-------- 74 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEec--------
Confidence 4677788999999999999999999999999998754333 44567889999999996 9999999987732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHh-----hcCCCCHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE-----SYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~-----~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+++|||+++++.++.. ....+++..+..++.|++.||+|
T Consensus 75 --------------------------------~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~ 122 (288)
T cd06616 75 --------------------------------EGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNY 122 (288)
T ss_pred --------------------------------CCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 34568999999887665432 23569999999999999999999
Q ss_pred HHhC-CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC--CC
Q 000993 535 IHGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PK 611 (1196)
Q Consensus 535 LHs~-gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~ 611 (1196)
||+. +++||||||+||+++.++.+||+|||+++.+.... ......|++.|+|||++.+. ..
T Consensus 123 lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~ 186 (288)
T cd06616 123 LKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI----------------AKTRDAGCRPYMAPERIDPSARDG 186 (288)
T ss_pred HhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC----------------ccccccCccCccCHHHhccccccC
Confidence 9975 99999999999999999999999999997653211 11234688999999999874 36
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhc--CCCC-CccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~--~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
++.++|||||||++|||++ ||................ ..++ ......++++.+||++||+.||.+|||++++++
T Consensus 187 ~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 187 YDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred CcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 8999999999999999996 765443211111111111 1111 112345678999999999999999999999999
Q ss_pred ccCCCCch
Q 000993 686 DALPPQME 693 (1196)
Q Consensus 686 ~~~~~~~~ 693 (1196)
|+|+....
T Consensus 267 ~~~~~~~~ 274 (288)
T cd06616 267 HPFIKDYE 274 (288)
T ss_pred Chhhhchh
Confidence 99997654
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=316.58 Aligned_cols=257 Identities=27% Similarity=0.392 Sum_probs=208.3
Q ss_pred CcccCCceEE-eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCc
Q 000993 377 SRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 377 ~~~~~~y~~~-~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~ 454 (1196)
-...++|.+- ++||-|-.|+|..|.++.||+.+|+|++.. .....+|+++.-.. .|||||+++++|-.
T Consensus 57 ~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-------s~KARrEVeLHw~~s~h~~iV~IidVyeN--- 126 (400)
T KOG0604|consen 57 YSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-------SPKARREVELHWMASGHPHIVSIIDVYEN--- 126 (400)
T ss_pred ccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-------CHHHHhHhhhhhhhcCCCceEEeehhhhh---
Confidence 3356788774 579999999999999999999999998852 23456788765544 79999999988721
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCC--CCHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEG 531 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~--l~e~~~~~i~~qIa~g 531 (1196)
.......+.||||.+. |.|...++.++. |++.++..|+.||..|
T Consensus 127 ---------------------------------s~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~A 173 (400)
T KOG0604|consen 127 ---------------------------------SYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLA 173 (400)
T ss_pred ---------------------------------hccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHH
Confidence 1123578899999996 589999987765 9999999999999999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCC---CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
+.|||+.+|.||||||+|+|.... ..+||+|||+|+....+ ....+.|.||.|.|||++..
T Consensus 174 v~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~----------------~~L~TPc~TPyYvaPevlg~ 237 (400)
T KOG0604|consen 174 VRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEP----------------GDLMTPCFTPYYVAPEVLGP 237 (400)
T ss_pred HHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCC----------------ccccCCcccccccCHHHhCc
Confidence 999999999999999999999754 46999999999863211 12356789999999999987
Q ss_pred CCCCCCcchhHHHHHHHHHhhc---CCchhHHH----HHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCCH
Q 000993 609 WPKIDEKADMYSLGIVFFELWH---PFSTAMER----QIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSA 680 (1196)
Q Consensus 609 ~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~----~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta 680 (1196)
..|+..+|+||+||++|-|++ ||+..... ....++......+| +.|...+..++++|+.+|..+|.+|.|+
T Consensus 238 -eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI 316 (400)
T KOG0604|consen 238 -EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTI 316 (400)
T ss_pred -hhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeH
Confidence 579999999999999999997 66544321 12223334444555 5888889999999999999999999999
Q ss_pred HHHHhccCCCCch
Q 000993 681 TELLQDALPPQME 693 (1196)
Q Consensus 681 ~eiL~~~~~~~~~ 693 (1196)
.+++.|||..+..
T Consensus 317 ~~~m~hpwi~~~~ 329 (400)
T KOG0604|consen 317 EEVMDHPWINQYE 329 (400)
T ss_pred HHhhcCchhcccc
Confidence 9999999987753
|
|
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-34 Score=319.31 Aligned_cols=257 Identities=23% Similarity=0.399 Sum_probs=202.2
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC----chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS----LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~----~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
+|+..+.||+|+||.||+|.+..+++.||+|++...... ......+.+|+.+++.++||||+++++.+.
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------- 73 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATC------- 73 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceec-------
Confidence 467788999999999999999999999999998754321 123467889999999999999999998873
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....++++|||+++ +|.+++....++++..++.++.||+.||+|||
T Consensus 74 ---------------------------------~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH 120 (268)
T cd06630 74 ---------------------------------EDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLH 120 (268)
T ss_pred ---------------------------------cCCeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 24567999999974 89999988888999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCC-CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 537 GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
++|++||||||+||+++.++ .+||+|||++.......... ........||..|+|||.+.+ ..++.+
T Consensus 121 ~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~PE~~~~-~~~~~~ 188 (268)
T cd06630 121 ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGA-----------GEFQGQLLGTIAFMAPEVLRG-EQYGRS 188 (268)
T ss_pred hCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccC-----------CccccccccccceeCHhHhcc-CCCCcc
Confidence 99999999999999998776 59999999997654221000 001123468899999999877 568999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHH--HHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMER--QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~--~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
+|+||||+++|+|++ ||...... .............+......++++.+++.+||..+|.+||++.++++|+||.
T Consensus 189 ~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 189 CDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred cchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 999999999999996 66432211 1111111111222223334567899999999999999999999999999974
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-34 Score=318.74 Aligned_cols=251 Identities=28% Similarity=0.378 Sum_probs=195.7
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
++.....||+|+||.||+|++..++..||+|.+.... ....+.+.+|+.+++.++||||+++++++..
T Consensus 9 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---------- 76 (268)
T cd06624 9 ENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD--SRYVQPLHEEIALHSYLKHRNIVQYLGSDSE---------- 76 (268)
T ss_pred cCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC--HHHHHHHHHHHHHHHhcCCCCeeeeeeeecc----------
Confidence 3344468999999999999999899999999886432 3345678999999999999999999988732
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCC--CHHHHHHHHHHHHHHHHHHHh
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHF--DKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l--~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....|++|||++ ++|.+++... ..+ ++..+..++.||+.||+|||+
T Consensus 77 ------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~ 126 (268)
T cd06624 77 ------------------------------NGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHD 126 (268)
T ss_pred ------------------------------CCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 356899999997 5999988754 445 888899999999999999999
Q ss_pred CCCcccCCCcCcEEecC-CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC-CCCCCc
Q 000993 538 QGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEK 615 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~s~k 615 (1196)
+||+||||||+||+++. ++.+||+|||++....... .......|++.|+|||++.+. ..++.+
T Consensus 127 ~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~ 191 (268)
T cd06624 127 NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN---------------PCTETFTGTLQYMAPEVIDKGPRGYGAP 191 (268)
T ss_pred CCEeecCCCHHHEEEcCCCCeEEEecchhheecccCC---------------CccccCCCCccccChhhhccccccCCch
Confidence 99999999999999986 6789999999987542111 011233578999999998652 247899
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
+|+||||+++|+|++ ||...................+.......+++.+++++||+.+|.+|||+.+++.|||+
T Consensus 192 ~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 192 ADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred hhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 999999999999996 66543222221111111122222333456789999999999999999999999999996
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-35 Score=340.68 Aligned_cols=248 Identities=23% Similarity=0.356 Sum_probs=204.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc---E-EEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGR---H-YAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~---~-vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
++-.+.++||+|+||+||+|+.+..+. . ||||..+... .......+|++|.++|+.++|||||++||++..
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~---- 232 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVL---- 232 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcC----
Confidence 455666899999999999999986533 3 8999887533 455667889999999999999999999998743
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~ 533 (1196)
...+|||||+|. |+|.++|++.+ .++..+...++.+.+.||+
T Consensus 233 ------------------------------------~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~ 276 (474)
T KOG0194|consen 233 ------------------------------------EEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLE 276 (474)
T ss_pred ------------------------------------CCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHH
Confidence 345799999996 59999999877 4999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++++|||||-.+|||++.++.+||+|||+++.-..- ........-...|+|||.+.. ..|+
T Consensus 277 YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~---------------~~~~~~~klPirWLAPEtl~~-~~~s 340 (474)
T KOG0194|consen 277 YLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQY---------------VMKKFLKKLPIRWLAPETLNT-GIFS 340 (474)
T ss_pred HHHHCCCcchhHhHHHheecCCCeEEeCccccccCCcce---------------eeccccccCcceecChhhhcc-Cccc
Confidence 999999999999999999999999999999998753200 001111235678999999998 5899
Q ss_pred CcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 614 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
.++|||||||++||+++ ||.+....+....+.......+. ....+..+..++.+||..||++||++.++.+
T Consensus 341 ~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~-~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 341 FKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPI-PSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred cccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCC-CCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 99999999999999985 88888887777666553433332 2255568899999999999999999999976
|
|
| >PRK14799 thrS threonyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=345.01 Aligned_cols=358 Identities=14% Similarity=0.138 Sum_probs=266.8
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----ee--cCCCcccccceEEEeecCCceEeecCCCcHH
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLP 812 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ 812 (1196)
..+.|+++|+|.++.+++.|++.+++.+.++||++|.||.+ ++ +++.+.+.++||.+ |.+|+.++|||+.|++
T Consensus 155 ~~~~G~~~~lP~G~~i~~~L~~~~r~~~~~~Gy~eV~TP~i~~~eL~k~SGh~~~y~~~mf~~-~~~~e~~~LrPm~cp~ 233 (545)
T PRK14799 155 EAGSGLVLFHPKGQTIRNELIAFMREINDSMGYQEVYTSHVFKTDIWKISGHYTLYRDKLIVF-NMEGDEYGVKPMNCPA 233 (545)
T ss_pred ccCCcceEEcChHHHHHHHHHHHHHHHHHHcCCeEEECCccchHHHHhhccccccchhhccee-eccCceEEeccCCCHH
Confidence 45789999999999999999999999999999999999999 22 33345589999988 8889999999999999
Q ss_pred HHHHHHhCC----CCceeEEEecCeeecCCCCC-----CCcceeEeEEEEeCCCCcc-chH-HHHHHHHHHHHHcCCC-C
Q 000993 813 FIRWAISNQ----KSSFKRYEISSVYRRAIGHS-----PPNRYLQGDFDIIGGASAL-TEA-EVLKVTMDIVTRFFHA-E 880 (1196)
Q Consensus 813 iaR~~a~~~----~~P~r~~Y~G~VfR~e~~~~-----~~~ef~Q~GvEiiG~~~~~-aDa-EvI~la~~~L~~lgi~-~ 880 (1196)
++|+++.+. ..|+|+|++|+|||+|.++. |.|+|+|+++|+||..++. +|+ |++.++.++++.+|++ .
T Consensus 234 ~~~~~~~~~~SyrdLPlR~~e~g~vfR~E~sg~l~GL~RvReF~Q~DaHif~~~~q~~~E~~~~l~~i~~vy~~fG~~~~ 313 (545)
T PRK14799 234 HILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIFLREDQLREEIKMLISKTVEVWHKFGFKDD 313 (545)
T ss_pred HHHHHhccccChhhCCHhhEEecceecCCCCCCccccccceeEEEcccEEEeCHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 999998742 46999999999999999874 6667999999999999875 887 9999999999999996 2
Q ss_pred ceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcC
Q 000993 881 SCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCG 960 (1196)
Q Consensus 881 ~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g 960 (1196)
++.+.++++. .+.+|.++.|.+.... + ++.+.+.|++....+...+|+ |
T Consensus 314 ~~~i~ls~Rp-----e~~~G~~~~wdka~~~---------------------l-~~~L~~~gl~~~~~~g~gafy----g 362 (545)
T PRK14799 314 DIKPYLSTRP-----DESIGSDELWEKATNA---------------------L-ISALQESGLKFGIKEKEGAFY----G 362 (545)
T ss_pred cEEEEEEcCh-----hhhcCCHHHHHHHHHH---------------------H-HHHHHHcCCCeEEecceeccc----c
Confidence 4999999986 3456765533222111 1 233334555554444444443 2
Q ss_pred ChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcccccccccccccccc
Q 000993 961 AADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRY 1040 (1196)
Q Consensus 961 ~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRY 1040 (1196)
+.. +-.+..++.+. .+. ..+.+|+.+.+.++ + +.+..+... ..+|
T Consensus 363 pki------------D~~v~dalgr~-~q~----~Tiqldf~lp~rf~----L--ey~~~~~~~------~~pv------ 407 (545)
T PRK14799 363 PKI------------DFEIRDSLGRW-WQL----STIQVDFNLPERFK----L--EYIDKDGIK------KRPV------ 407 (545)
T ss_pred Ccc------------ceEehhhcCch-hhh----hhhhhhcCcccccc----e--EEEcCCCCC------cccE------
Confidence 210 01111222221 000 12335555554444 1 222111000 0001
Q ss_pred chhhhhccccccccccCCCCCCCcceecccHHHHHhhccC---CCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHc
Q 000993 1041 DYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV---DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEE 1117 (1196)
Q Consensus 1041 D~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~---~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~ 1117 (1196)
+...|+..|+||++.+|.+ +..+. ..++.+|+|++.+ +....+|.++++.||++
T Consensus 408 ---------------------~ihr~~~GgiERli~iL~e~~~G~~P~-wlaP~qV~Iipi~-e~~~~~A~~Ia~~LR~~ 464 (545)
T PRK14799 408 ---------------------MVHRAIYGSIDRFVAILLEHFKGKLPT-WLSSVQVRVLPIT-DEVNEYAEKVLNDMRKR 464 (545)
T ss_pred ---------------------EEEccCCCCHHHHHHHHHHHcCCCCCC-CCCCceEEEEEcC-HHHHHHHHHHHHHHHhC
Confidence 1233777799999988853 32332 2457899999996 66788999999999999
Q ss_pred CCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 000993 1118 NIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1187 (1196)
Q Consensus 1118 Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~ 1187 (1196)
|++|+++.. ++++++++++|++.|+|++|+||++|+++|+|+||+|.+++|..++++++++.+.+.+++
T Consensus 465 GirVelD~~-~~~lgkkir~A~k~gip~viIIG~~E~e~~~VtVR~r~~~eq~~v~l~eli~~l~~~i~~ 533 (545)
T PRK14799 465 RIRAEIDYA-GETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARGNIEVRNVKFEKFLELLITEIAQ 533 (545)
T ss_pred CCEEEEECC-CCCHHHHHHHHHHcCCCEEEEEChhHhhcCeEEEEECCCCceEEEcHHHHHHHHHHHHhh
Confidence 999998876 679999999999999999999999999999999999999999999999999999888775
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=335.87 Aligned_cols=293 Identities=24% Similarity=0.395 Sum_probs=222.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc-hhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.-|..++.||-|+||+|.+++...|...||+|.+++.+.-. .....+.-|-.||...+.+-||++|-.|
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySF---------- 698 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSF---------- 698 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEe----------
Confidence 35678999999999999999999999999999998655322 2234577899999999999999999777
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
++..++|+||+|++ |++..+|.+.+-|.|..+++|+.++.+|+++.|..
T Consensus 699 ------------------------------QDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkm 748 (1034)
T KOG0608|consen 699 ------------------------------QDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKM 748 (1034)
T ss_pred ------------------------------ccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhc
Confidence 45678999999997 59999999999999999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhcccc---cccc------CCCCCC---C---------------CCCccccC
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLE---QLDQ------DAAFPT---D---------------TGGVSVDG 591 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~---~~~~------~~~~~~---~---------------~~~~~~~~ 591 (1196)
|+|||||||+|||||.+|++||+|||+|.-+.-. .+.+ ...... . .....+..
T Consensus 749 GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~a 828 (1034)
T KOG0608|consen 749 GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILA 828 (1034)
T ss_pred cceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhh
Confidence 9999999999999999999999999999743211 0000 000000 0 00011223
Q ss_pred cCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHH--HhhhcCCCCCccccCCHHHHHHH
Q 000993 592 TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLS--DLKQKGELPPSWVAKFSEQESLL 666 (1196)
Q Consensus 592 ~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~--~l~~~~~~p~~~~~~~~~l~~LI 666 (1196)
.+.+||+.|+|||++.. ..|+..+|+||.|||||||+. ||....+.+...+ .++....+ +...+.++++.++|
T Consensus 829 hslvgt~nyiapevl~r-~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~-~~~~~ls~e~~~li 906 (1034)
T KOG0608|consen 829 HSLVGTPNYIAPEVLAR-TGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHI-PYQGNLSKEALDLI 906 (1034)
T ss_pred hhhcCCCcccChHHhcc-cCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhcccc-ccccccCHHHHHHH
Confidence 46789999999999998 579999999999999999994 8876655433322 22222222 33446678999999
Q ss_pred HHcccCCCCCCC---CHHHHHhccCCCCchHHHHHHH----HHhcCCCCCCcchhhh
Q 000993 667 RRLMSPSPSDRP---SATELLQDALPPQMEYELLDNI----LRMMHSSEDTSIYDKV 716 (1196)
Q Consensus 667 ~~cL~~dP~~RP---ta~eiL~~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~ 716 (1196)
.++. .+++.|. .+++|..|+||+.+.+..+... +..+..+.|.+.++.+
T Consensus 907 ~kLc-~sad~RLGkng~d~vKaHpfFkgIDfsslRkq~ApYIP~ItHptDTSNFdpv 962 (1034)
T KOG0608|consen 907 QKLC-CSADSRLGKNGADQVKAHPFFKGIDFSSLRKQRAPYIPRITHPTDTSNFDPV 962 (1034)
T ss_pred HHHh-cChhhhhcccchhhhhcCccccccchHhhhhccCCcCccccCCCccccCCcC
Confidence 8764 4577787 4788999999999988765442 2344455566666543
|
|
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-34 Score=324.99 Aligned_cols=268 Identities=26% Similarity=0.420 Sum_probs=205.9
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
+..++|++.+.||.|+||.||+|.++.+|+.||+|+++...........+.+|+.+++.++||||+++++.+.+...
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~--- 80 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQD--- 80 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcch---
Confidence 34678999999999999999999999999999999997654433344567889999999999999999988743210
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
.+ ........+|++|||+++++.+.+... ..+++..++.++.||+.||+|||
T Consensus 81 ---~~------------------------~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH 133 (302)
T cd07864 81 ---AL------------------------DFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCH 133 (302)
T ss_pred ---hh------------------------hccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 00 000123478999999999888877654 46999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+||+++.++.+||+|||++........ .......++..|+|||.+.+...++.++
T Consensus 134 ~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~ 199 (302)
T cd07864 134 KKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEES--------------RPYTNKVITLWYRPPELLLGEERYGPAI 199 (302)
T ss_pred hCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcc--------------cccccceeccCccChHHhcCCCCCCchh
Confidence 99999999999999999999999999999986532210 0112235678899999987645578999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-CC--------------------------CccccCCHHHHHHH
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LP--------------------------PSWVAKFSEQESLL 666 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-~p--------------------------~~~~~~~~~l~~LI 666 (1196)
|||||||++|||++ ||.................. .+ ..+...++.+.++|
T Consensus 200 Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 279 (302)
T cd07864 200 DVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLL 279 (302)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHH
Confidence 99999999999996 66544332222111111110 00 01123456889999
Q ss_pred HHcccCCCCCCCCHHHHHhccCC
Q 000993 667 RRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 667 ~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
.+||+.||.+||++.+++.|+|+
T Consensus 280 ~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 280 DHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred HHHccCChhhCCCHHHHhcCCCC
Confidence 99999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-34 Score=333.02 Aligned_cols=261 Identities=26% Similarity=0.425 Sum_probs=204.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|.+.+.||+|+||.||+|.+..+|+.||+|++............+.+|+.+++.++||||+++++++.....
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~----- 90 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----- 90 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccc-----
Confidence 378999999999999999999999999999999987544333345678899999999999999999987742210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
.......|+++++++++|.+++.. ..+++..++.++.||+.||+|||++|
T Consensus 91 -----------------------------~~~~~~~~lv~~~~~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ 140 (345)
T cd07877 91 -----------------------------LEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSAD 140 (345)
T ss_pred -----------------------------ccccccEEEEehhcccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 012345789999998899887764 46999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+||+++.++.+||+|||+++.... ......+|+.|+|||++.+...++.++|||
T Consensus 141 ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dvw 202 (345)
T cd07877 141 IIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIW 202 (345)
T ss_pred eeecCCChHHEEEcCCCCEEEecccccccccc------------------cccccccCCCccCHHHHhCccCCCchhhHH
Confidence 99999999999999999999999999875321 112346889999999987755688999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcC-----------------------CCCC-----ccccCCHHHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKG-----------------------ELPP-----SWVAKFSEQESLLRR 668 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~-----------------------~~p~-----~~~~~~~~l~~LI~~ 668 (1196)
||||++|||++ ||................. ..+. .+...++++.++|.+
T Consensus 203 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 282 (345)
T cd07877 203 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEK 282 (345)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHH
Confidence 99999999996 6643322221111111000 0110 112346688999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCch
Q 000993 669 LMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||+.||.+||++.++++|+||.+..
T Consensus 283 ~L~~dp~~R~t~~e~l~h~~f~~~~ 307 (345)
T cd07877 283 MLVLDSDKRITAAQALAHAYFAQYH 307 (345)
T ss_pred HcCCChhhcCCHHHHhcChhhhhcC
Confidence 9999999999999999999998653
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=324.00 Aligned_cols=252 Identities=26% Similarity=0.386 Sum_probs=203.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++++.||+|+||+||+|.+..+|+.||+|++.... .......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--------- 74 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLN--------- 74 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEec---------
Confidence 68899999999999999999999999999999987543 23456789999999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh-C
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-Q 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs-~ 538 (1196)
...+|+||||++ ++|.+++...+.+++..++.++.+++.||.|||+ .
T Consensus 75 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 123 (284)
T cd06620 75 -------------------------------ENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVH 123 (284)
T ss_pred -------------------------------CCEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 356899999997 4898988887889999999999999999999997 6
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
+++||||||+||+++.++.++|+|||++....... ....+|+..|+|||++.+ ..++.++|+
T Consensus 124 ~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~-----------------~~~~~~~~~~~aPE~~~~-~~~~~~~Di 185 (284)
T cd06620 124 RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI-----------------ADTFVGTSTYMSPERIQG-GKYTVKSDV 185 (284)
T ss_pred CeeccCCCHHHEEECCCCcEEEccCCcccchhhhc-----------------cCccccCcccCCHHHHcc-CCCCccchH
Confidence 89999999999999999999999999986532110 123478999999999877 478999999
Q ss_pred HHHHHHHHHhhc---CCchhHHH-----------HHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMER-----------QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 684 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~-----------~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL 684 (1196)
|||||++|+|++ ||...... ........ ...........+.++.+|+.+||+.||.+|||+.+++
T Consensus 186 ~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~ 264 (284)
T cd06620 186 WSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQ-EPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLC 264 (284)
T ss_pred HHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhh-ccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHh
Confidence 999999999996 77643321 11111111 1111111122556899999999999999999999999
Q ss_pred hccCCCCc
Q 000993 685 QDALPPQM 692 (1196)
Q Consensus 685 ~~~~~~~~ 692 (1196)
+|+||.+.
T Consensus 265 ~~~~~~~~ 272 (284)
T cd06620 265 AMPPFIQA 272 (284)
T ss_pred cCcccccc
Confidence 99988664
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=333.43 Aligned_cols=260 Identities=27% Similarity=0.415 Sum_probs=204.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|.+.+.||+|+||.||+|+++.+|+.||||++............+.+|+.+++.++||||+++++++.....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----- 88 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVS----- 88 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheeccccc-----
Confidence 368999999999999999999999899999999987544333344568899999999999999999988743210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
......+|++|||+..+|..++. ..+++..++.++.||+.||+|||++|
T Consensus 89 -----------------------------~~~~~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ 137 (342)
T cd07879 89 -----------------------------GDEFQDFYLVMPYMQTDLQKIMG--HPLSEDKVQYLVYQMLCGLKYIHSAG 137 (342)
T ss_pred -----------------------------CCCCceEEEEecccccCHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 01234579999999888877653 46899999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
++||||||+||+++.++.+||+|||+++.... ......+|+.|+|||++.+...++.++|||
T Consensus 138 i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 199 (342)
T cd07879 138 IIHRDLKPGNLAVNEDCELKILDFGLARHADA------------------EMTGYVVTRWYRAPEVILNWMHYNQTVDIW 199 (342)
T ss_pred cccCCCCHHHEEECCCCCEEEeeCCCCcCCCC------------------CCCCceeeecccChhhhcCccccCchHHHH
Confidence 99999999999999999999999999874311 123346789999999987645688999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhc-----------------------CCCC-----CccccCCHHHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQK-----------------------GELP-----PSWVAKFSEQESLLRR 668 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~-----------------------~~~p-----~~~~~~~~~l~~LI~~ 668 (1196)
||||++|||++ ||............+... ...+ ..+...++.+.+||++
T Consensus 200 slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 279 (342)
T cd07879 200 SVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEK 279 (342)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHH
Confidence 99999999996 776543322222111100 0001 1122345678999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCch
Q 000993 669 LMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||+.||.+||++.+++.|+||....
T Consensus 280 ~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 280 MLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HcCCChhhCcCHHHHhcCcchhhcc
Confidence 9999999999999999999997753
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-34 Score=318.18 Aligned_cols=243 Identities=22% Similarity=0.314 Sum_probs=194.4
Q ss_pred eeccCCcEEEEEEEE--ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCC
Q 000993 388 PLGHGGFGHVVLCKN--KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 465 (1196)
Q Consensus 388 ~LG~G~fG~Vy~a~~--~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 465 (1196)
+||+|+||.||+|.+ +.++..+|+|+++.........+.+.+|+.+++.++||||+++++.+.
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------------- 66 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE--------------- 66 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc---------------
Confidence 589999999999975 456889999998755555555678999999999999999999997751
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccC
Q 000993 466 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544 (1196)
Q Consensus 466 g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrD 544 (1196)
....+++|||++ ++|.+++.....+++..+..++.||+.||+|||++||+|||
T Consensus 67 --------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~d 120 (257)
T cd05116 67 --------------------------AESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRD 120 (257)
T ss_pred --------------------------CCCcEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecc
Confidence 123589999997 58999998878899999999999999999999999999999
Q ss_pred CCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHH
Q 000993 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 624 (1196)
Q Consensus 545 LKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGvi 624 (1196)
|||+||+++.++.+||+|||+++........ ........+++.|+|||.+.+ ..++.++|||||||+
T Consensus 121 lkp~nill~~~~~~kl~Dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~ 187 (257)
T cd05116 121 LAARNVLLVTQHYAKISDFGLSKALGADENY------------YKAKTHGKWPVKWYAPECMNY-YKFSSKSDVWSFGVL 187 (257)
T ss_pred cchhhEEEcCCCeEEECCCccccccCCCCCe------------eeecCCCCCCccccCHhHhcc-CCcCchhHHHHHHHH
Confidence 9999999999999999999999765322100 001122345689999999876 568899999999999
Q ss_pred HHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 625 FFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 625 LyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||++ ||........... +. ....++.....++++.++|.+||+.||.+||++.+|.+.
T Consensus 188 l~el~t~g~~p~~~~~~~~~~~~-i~-~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~ 251 (257)
T cd05116 188 MWEAFSYGQKPYKGMKGNEVTQM-IE-SGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELR 251 (257)
T ss_pred HHHHHhCCCCCCCCCCHHHHHHH-HH-CCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHH
Confidence 999985 7765544433332 22 223333344567899999999999999999999999753
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-34 Score=327.34 Aligned_cols=258 Identities=28% Similarity=0.432 Sum_probs=198.8
Q ss_pred CceEEeeeccCCcEEEEEEEEcc--CCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKL--DGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~--~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.|++.++||+|+||.||+|.++. +++.||+|.+.... ........+.+|+.+++.++||||+++++++.+.
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 74 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH------ 74 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC------
Confidence 47889999999999999999998 89999999987533 1122345678899999999999999999887431
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-----DHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-----~~l~e~~~~~i~~qIa~gL~ 533 (1196)
....+|+||||++++|.+++... ..+++..++.++.||+.||+
T Consensus 75 --------------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~ 122 (316)
T cd07842 75 --------------------------------ADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVH 122 (316)
T ss_pred --------------------------------CCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHH
Confidence 23578999999998888877432 26899999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecC----CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDA----RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~----~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
|||+++|+||||||+||+++. ++.+||+|||+++....... .........+|+.|+|||++.+.
T Consensus 123 ~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~~ 190 (316)
T cd07842 123 YLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLK------------PLADLDPVVVTIWYRAPELLLGA 190 (316)
T ss_pred HHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcc------------cccccCCccccccccCHHHHhCC
Confidence 999999999999999999999 89999999999986532210 01122345789999999998775
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHH---------HHH---HHh-----------------------hhcCCC
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQ---------IVL---SDL-----------------------KQKGEL 651 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~---------~~~---~~l-----------------------~~~~~~ 651 (1196)
..++.++|||||||++|+|++ ||....... ... ..+ ......
T Consensus 191 ~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (316)
T cd07842 191 RHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTY 270 (316)
T ss_pred CCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCC
Confidence 568999999999999999996 664322111 000 000 000001
Q ss_pred C-C-------ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 652 P-P-------SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 652 p-~-------~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
+ . .+...++++.++|.+||+.||.+|||+.++++|+||
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 271 PSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred CCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 1 0 001344578899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=333.69 Aligned_cols=266 Identities=26% Similarity=0.369 Sum_probs=207.7
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~ 456 (1196)
...++|++.+.||.|+||.||+|.+..+|+.+|||++............+.+|+.+++.+ +||||++++++|...
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~---- 79 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAE---- 79 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccC----
Confidence 456789999999999999999999998999999998864433334455678899999999 999999999887321
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
+...+|+||||++++|..++... .+++..++.++.||+.||+|||
T Consensus 80 ----------------------------------~~~~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH 124 (337)
T cd07852 80 ----------------------------------NDKDIYLVFEYMETDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIH 124 (337)
T ss_pred ----------------------------------CCceEEEEecccccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 23467999999999999988765 7899999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+||+++.++.+||+|||+++.+....... .........||+.|+|||++.+...++.++
T Consensus 125 ~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~----------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~s 194 (337)
T cd07852 125 SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENP----------ENPVLTDYVATRWYRAPEILLGSTRYTKGV 194 (337)
T ss_pred HCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccc----------cCcchhcccccccccCceeeeccccccccc
Confidence 9999999999999999999999999999998653221100 001123356899999999887655688999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhc--------------------------CC--CCCccccCCHHHHHH
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--------------------------GE--LPPSWVAKFSEQESL 665 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~--------------------------~~--~p~~~~~~~~~l~~L 665 (1196)
|+|||||++|+|++ ||................ .. ........+.++.++
T Consensus 195 Di~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 274 (337)
T cd07852 195 DMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDL 274 (337)
T ss_pred hHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHH
Confidence 99999999999997 665333222111110000 00 011122346688999
Q ss_pred HHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 666 LRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 666 I~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|.+||+.||.+|||+.++++|+|+.++
T Consensus 275 i~~~l~~~P~~Rps~~~il~~~~~~~~ 301 (337)
T cd07852 275 LKKLLVFNPNKRLTAEEALEHPYVAQF 301 (337)
T ss_pred HHHhccCCcccccCHHHHhhChhhhhh
Confidence 999999999999999999999988874
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=342.13 Aligned_cols=256 Identities=29% Similarity=0.517 Sum_probs=214.1
Q ss_pred CCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC--CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeec
Q 000993 375 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD--KSLPVNDRILREVATLSRLQHQHVVRYYQAWFET 452 (1196)
Q Consensus 375 ~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~--~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~ 452 (1196)
+.+||+ +....||+|+|-+||+|.+..+|..||.-.++..+ .+....++|..|+.+|+.|+|||||++|.+|.+.
T Consensus 37 p~gRy~---k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~ 113 (632)
T KOG0584|consen 37 PTGRYL---KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDT 113 (632)
T ss_pred CCCcee---ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecC
Confidence 345653 23467999999999999999999999976665544 4445568999999999999999999999999653
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~g 531 (1196)
....+.+|+|.+. |+|..++.+.++++...+..|++||+.|
T Consensus 114 --------------------------------------~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkG 155 (632)
T KOG0584|consen 114 --------------------------------------DNKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKG 155 (632)
T ss_pred --------------------------------------CCceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHH
Confidence 2356889999995 8999999999999999999999999999
Q ss_pred HHHHHhCC--CcccCCCcCcEEecCC-CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 532 LAHIHGQG--IIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 532 L~yLHs~g--IiHrDLKp~NILld~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
|.|||++. |||||||-+||||+.+ |.|||+|+|+|+....+. ..+.+|||.|||||.+..
T Consensus 156 L~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~-----------------aksvIGTPEFMAPEmYEE 218 (632)
T KOG0584|consen 156 LVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH-----------------AKSVIGTPEFMAPEMYEE 218 (632)
T ss_pred hhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccc-----------------cceeccCccccChHHHhh
Confidence 99999995 9999999999999876 899999999999764321 244789999999999985
Q ss_pred CCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCcccc-CCHHHHHHHHHcccCCCCCCCCHHHHH
Q 000993 609 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVA-KFSEQESLLRRLMSPSPSDRPSATELL 684 (1196)
Q Consensus 609 ~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~-~~~~l~~LI~~cL~~dP~~RPta~eiL 684 (1196)
.|+..+||||||..|+||+| ||..-.+.....+.+. .+..|..+.. ..|++++||.+||.. ..+|||+.++|
T Consensus 219 --~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~-SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL 294 (632)
T KOG0584|consen 219 --NYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVT-SGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELL 294 (632)
T ss_pred --hcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHH-cCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHh
Confidence 69999999999999999997 8876655544444444 4444544443 357999999999999 99999999999
Q ss_pred hccCCCCc
Q 000993 685 QDALPPQM 692 (1196)
Q Consensus 685 ~~~~~~~~ 692 (1196)
+|+||...
T Consensus 295 ~d~Ff~~d 302 (632)
T KOG0584|consen 295 KDPFFDED 302 (632)
T ss_pred hChhhccc
Confidence 99999864
|
|
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-34 Score=316.02 Aligned_cols=245 Identities=22% Similarity=0.374 Sum_probs=195.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||+|+||.||++.++ ++..+|+|.+...... ..++.+|+.+|+.++||||+++++++.+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 70 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMS---EEDFIEEAKVMMKLSHPKLVQLYGVCTQ--------- 70 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCcc---HHHHHHHHHHHHHCCCCCceeEEEEEcc---------
Confidence 67999999999999999999886 5668999987643322 4578899999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|++|||++ ++|.+++.. ...+++..++.++.||+.||+|||++
T Consensus 71 -------------------------------~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 119 (256)
T cd05114 71 -------------------------------QKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERN 119 (256)
T ss_pred -------------------------------CCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 345799999997 589998875 34689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+||+++.++.+||+|||+++....... .......++..|+|||++.+ ..++.++|+
T Consensus 120 ~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di 184 (256)
T cd05114 120 SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY--------------TSSSGAKFPVKWSPPEVFNF-SKYSSKSDV 184 (256)
T ss_pred CccccccCcceEEEcCCCeEEECCCCCccccCCCce--------------eccCCCCCchhhCChhhccc-Cccchhhhh
Confidence 999999999999999999999999999876432110 01122345678999999887 568999999
Q ss_pred HHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 619 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 619 wSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||||+++|||++ ||......+........ ..+......+..+.+++.+||+.+|.+||++.++++.
T Consensus 185 ~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~ 254 (256)
T cd05114 185 WSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRG--FRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRA 254 (256)
T ss_pred HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC--CCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 999999999996 77665554444433322 1222222345689999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-34 Score=357.26 Aligned_cols=265 Identities=25% Similarity=0.394 Sum_probs=198.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+++|++.++||+|+||.||+|.+..+|+.||||+++.... ......++.+|+.+++.++||||+++++++.+
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d------- 73 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSD------- 73 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEee-------
Confidence 3689999999999999999999999999999999874332 23345679999999999999999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-----------CCCCHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-----------DHFDKELAWHLFR 526 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-----------~~l~e~~~~~i~~ 526 (1196)
....|++||||+ ++|.+++... ..++...++.++.
T Consensus 74 ---------------------------------~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~ 120 (932)
T PRK13184 74 ---------------------------------GDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFH 120 (932)
T ss_pred ---------------------------------CCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHH
Confidence 356799999997 4999988642 2345667889999
Q ss_pred HHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccC-CCCCCC--CCCccccCcCccccccCCCc
Q 000993 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQD-AAFPTD--TGGVSVDGTGQVGTYFYTAP 603 (1196)
Q Consensus 527 qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~GT~~Y~AP 603 (1196)
||+.||+|||++||+||||||+|||++.++.+||+|||+++.......... ...... ...........+||+.||||
T Consensus 121 QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAP 200 (932)
T PRK13184 121 KICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAP 200 (932)
T ss_pred HHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCH
Confidence 999999999999999999999999999999999999999987632111000 000000 00000011235799999999
Q ss_pred hhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH
Q 000993 604 EIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA 680 (1196)
Q Consensus 604 E~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta 680 (1196)
|++.+ ..++.++|||||||++|||++ ||......................+...++.+.+++.+||+.||++||+.
T Consensus 201 E~l~g-~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss 279 (932)
T PRK13184 201 ERLLG-VPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSS 279 (932)
T ss_pred HHhcC-CCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCH
Confidence 99987 568999999999999999997 77654443332221111111111234566789999999999999999876
Q ss_pred HHHHh
Q 000993 681 TELLQ 685 (1196)
Q Consensus 681 ~eiL~ 685 (1196)
.+.+.
T Consensus 280 ~eeLl 284 (932)
T PRK13184 280 VQELK 284 (932)
T ss_pred HHHHH
Confidence 65554
|
|
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=334.19 Aligned_cols=251 Identities=24% Similarity=0.347 Sum_probs=195.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~-----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~ 454 (1196)
++|++.+.||.|+||.||+|.+.. +++.||+|+++... .......+.+|+.+++.+ +||||++++++|...
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~-- 83 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA-TASEYKALMTELKILIHIGHHLNVVNLLGACTKP-- 83 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC-CHHHHHHHHHHHHHHHhhccCcchhheeeeEecC--
Confidence 478999999999999999997543 45789999986432 233456788999999999 899999999887432
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--------------------
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------------------- 513 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------------------- 513 (1196)
...++++|||++ ++|.+++...
T Consensus 84 -------------------------------------~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~ 126 (337)
T cd05054 84 -------------------------------------GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQK 126 (337)
T ss_pred -------------------------------------CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccc
Confidence 346789999997 4888887532
Q ss_pred -----------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEe
Q 000993 514 -----------------------------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552 (1196)
Q Consensus 514 -----------------------------------------~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILl 552 (1196)
.++++..+..++.||+.||+|||++||+||||||+|||+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill 206 (337)
T cd05054 127 EGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILL 206 (337)
T ss_pred cccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEE
Confidence 257889999999999999999999999999999999999
Q ss_pred cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc--
Q 000993 553 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH-- 630 (1196)
Q Consensus 553 d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt-- 630 (1196)
+.++.+||+|||+++.+.... .........++..|+|||++.+ ..++.++|||||||+||||++
T Consensus 207 ~~~~~vkL~DfG~a~~~~~~~-------------~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~SlGv~l~el~t~g 272 (337)
T cd05054 207 SENNVVKICDFGLARDIYKDP-------------DYVRKGDARLPLKWMAPESIFD-KVYTTQSDVWSFGVLLWEIFSLG 272 (337)
T ss_pred eCCCcEEEeccccchhcccCc-------------chhhccCCCCCccccCcHHhcC-CCCCccccHHHHHHHHHHHHHcC
Confidence 999999999999998653211 0111233456788999999987 568999999999999999985
Q ss_pred --CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 631 --PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 631 --Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||......+.....+. ....+......++++.+++.+||+.+|.+||++.+++++
T Consensus 273 ~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 273 ASPYPGVQIDEEFCRRLK-EGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred CCCCCCCCccHHHHHHHh-ccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 6754333222222222 222222233456789999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-35 Score=289.81 Aligned_cols=257 Identities=27% Similarity=0.502 Sum_probs=207.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.+|...++||+|.||+|++|+++.+++.||+|.++..+.+...-...++|+-+|+.+.|.|||+++++..
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlh---------- 71 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH---------- 71 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhc----------
Confidence 4577788999999999999999999999999999987766666677899999999999999999997641
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
....+-+|+|||..+|..++.+ ++.++.+.++.++.|+++||.|+|+++
T Consensus 72 ------------------------------sdkkltlvfe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshn 121 (292)
T KOG0662|consen 72 ------------------------------SDKKLTLVFEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHN 121 (292)
T ss_pred ------------------------------cCceeEEeHHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhh
Confidence 2467889999999999998875 456999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
+.||||||+|.||+.+|.+||+|||+|+.+.-+- ...+..+-|.+|.+|.++-|..-|+.+.|||
T Consensus 122 vlhrdlkpqnllin~ngelkladfglarafgipv---------------rcysaevvtlwyrppdvlfgakly~tsidmw 186 (292)
T KOG0662|consen 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPV---------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMW 186 (292)
T ss_pred hhhccCCcceEEeccCCcEEecccchhhhcCCce---------------EeeeceeeeeeccCcceeeeeehhccchHhh
Confidence 9999999999999999999999999999764321 1123457899999999999977799999999
Q ss_pred HHHHHHHHhhc---CCc-hhHHHHHHHHHhhhcCCC-----------------C-----CccccCCH----HHHHHHHHc
Q 000993 620 SLGIVFFELWH---PFS-TAMERQIVLSDLKQKGEL-----------------P-----PSWVAKFS----EQESLLRRL 669 (1196)
Q Consensus 620 SlGviLyELlt---Pf~-~~~~~~~~~~~l~~~~~~-----------------p-----~~~~~~~~----~l~~LI~~c 669 (1196)
|.|||+.|+.. |.. +.+-.....++...-+.. | ..|....| .-++|+.++
T Consensus 187 sagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkl 266 (292)
T KOG0662|consen 187 SAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKL 266 (292)
T ss_pred hcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHH
Confidence 99999999974 433 333233333332221111 0 01222222 237999999
Q ss_pred ccCCCCCCCCHHHHHhccCCCCc
Q 000993 670 MSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 670 L~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|.-+|.+|.+++..++||+|...
T Consensus 267 l~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 267 LKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred hccCcccccCHHHHhcCcccccc
Confidence 99999999999999999988653
|
|
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-34 Score=315.08 Aligned_cols=250 Identities=33% Similarity=0.560 Sum_probs=203.1
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||+|+||.||+|.++.+|..||+|.+..........+.+.+|+.+++.++||||+++++.+.+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~---------- 70 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQE---------- 70 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheecc----------
Confidence 5788999999999999999999999999999997654433445678899999999999999999987632
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+++||++ ++|.+++.... .+++..+..++.||+.||+|||++
T Consensus 71 ------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 120 (257)
T cd08225 71 ------------------------------NGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR 120 (257)
T ss_pred ------------------------------CCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 356799999996 59999887543 479999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCC-eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 539 GIIHRDLTPNNIFFDARND-IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~-vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+++|+||||+||+++.++. +||+|||.+........ ......|++.|+|||++.+ ..++.++|
T Consensus 121 ~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~---------------~~~~~~~~~~~~ape~~~~-~~~~~~~D 184 (257)
T cd08225 121 KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME---------------LAYTCVGTPYYLSPEICQN-RPYNNKTD 184 (257)
T ss_pred CcccccCCHHHEEEcCCCCeEEecccccchhccCCcc---------------cccccCCCccccCHHHHcC-CCCCchhh
Confidence 9999999999999998864 69999999976532110 0122358899999999887 46889999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
+||||+++|||++ ||.............. ...++.....+.++.++|.+||..+|++|||+.++++|+||
T Consensus 185 v~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 185 IWSLGCVLYELCTLKHPFEGNNLHQLVLKICQ--GYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred HHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc--ccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 9999999999996 7765544444333322 22333333456789999999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-34 Score=325.19 Aligned_cols=253 Identities=26% Similarity=0.409 Sum_probs=202.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
..|...+.||+|+||.||+|.+..+|+.||+|++..... .......+.+|+.+++.++||||++++++|..
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~-------- 86 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLR-------- 86 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEe--------
Confidence 458889999999999999999999999999999875432 33344678899999999999999999998843
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....|+||||++|++.+++.. ...+++..+..++.||+.||.|||++
T Consensus 87 --------------------------------~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~ 134 (307)
T cd06607 87 --------------------------------EHTAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH 134 (307)
T ss_pred --------------------------------CCeEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 345799999999998888764 45699999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--CCCCCCcc
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 616 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~s~ks 616 (1196)
||+||||+|+||+++.++.+||+|||++..... .....+++.|+|||++.+ ...++.++
T Consensus 135 ~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~-------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~s 195 (307)
T cd06607 135 ERIHRDIKAGNILLTEPGTVKLADFGSASLVSP-------------------ANSFVGTPYWMAPEVILAMDEGQYDGKV 195 (307)
T ss_pred CceecCCCcccEEECCCCCEEEeecCcceecCC-------------------CCCccCCccccCceeeeccCCCCCCccc
Confidence 999999999999999999999999999865321 123467889999998752 24588999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||||||+++|||++ ||.............. ...........+..+.++|.+||+.||.+||++.++++|+|+....
T Consensus 196 Dv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 196 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-NDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred chHHHHHHHHHHHcCCCCCCCccHHHHHHHHhc-CCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 99999999999997 6654433332222211 1111111123456889999999999999999999999999987643
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=327.36 Aligned_cols=253 Identities=24% Similarity=0.404 Sum_probs=201.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
+.|.....||.|+||.||++.+..++..||||.+.... ....+.+.+|+.+++.++||||+++++.+..
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~--------- 90 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHENVVDMYNSYLV--------- 90 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch--HHHHHHHHHHHHHHHhCCCCcHHHHHHheec---------
Confidence 44555678999999999999999899999999986432 2345678899999999999999999987632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
..+.|++|||+++ +|.+++. ...+++..++.++.||+.||+|||++|
T Consensus 91 -------------------------------~~~~~lv~e~~~~~~L~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ 138 (292)
T cd06658 91 -------------------------------GDELWVVMEFLEGGALTDIVT-HTRMNEEQIATVCLSVLRALSYLHNQG 138 (292)
T ss_pred -------------------------------CCeEEEEEeCCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3567999999975 7877764 456899999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+||+++.++.+||+|||++....... .......|++.|+|||.+.+ ..++.++|+|
T Consensus 139 ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~ 202 (292)
T cd06658 139 VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV---------------PKRKSLVGTPYWMAPEVISR-LPYGTEVDIW 202 (292)
T ss_pred EeecCCCHHHEEEcCCCCEEEccCcchhhccccc---------------ccCceeecCccccCHHHHcc-CCCCchhhHH
Confidence 9999999999999999999999999987542111 01133568999999999877 5689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|||+++|||++ ||....................+.....+..+.+++.+||..||.+|||++++++|+||...
T Consensus 203 slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~ 278 (292)
T cd06658 203 SLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLA 278 (292)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhcc
Confidence 99999999997 77655443333222211112222223456788999999999999999999999999998754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-34 Score=321.24 Aligned_cols=248 Identities=28% Similarity=0.382 Sum_probs=191.9
Q ss_pred eeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchh-HHHHHHHHHHHHh---cCCCCeeeeeeeeeecCccccCCCCcC
Q 000993 388 PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV-NDRILREVATLSR---LQHQHVVRYYQAWFETGVADFDGDSMW 463 (1196)
Q Consensus 388 ~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~-~~~~~~Ev~iL~~---L~HpnIV~l~~~~~e~~~~~~~~~~~~ 463 (1196)
.||+|+||.||++.+..+++.||+|.+......... ...+.+|..+++. .+||||+.+++.+..
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------ 68 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHT------------ 68 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEec------------
Confidence 489999999999999999999999998754332222 2234445444433 479999999887732
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcc
Q 000993 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 542 (1196)
Q Consensus 464 ~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiH 542 (1196)
...+|+||||++ ++|.+++...+.+++..+..++.||+.||+|||+++|+|
T Consensus 69 ----------------------------~~~~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH 120 (279)
T cd05633 69 ----------------------------PDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVY 120 (279)
T ss_pred ----------------------------CCeEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCC
Confidence 346799999997 589999988888999999999999999999999999999
Q ss_pred cCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHH
Q 000993 543 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622 (1196)
Q Consensus 543 rDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlG 622 (1196)
|||||+|||++.++.++|+|||++...... ......||+.|+|||.+.+...++.++|+||||
T Consensus 121 ~dikp~Nil~~~~~~~~l~dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG 183 (279)
T cd05633 121 RDLKPANILLDEHGHVRISDLGLACDFSKK-----------------KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLG 183 (279)
T ss_pred CCCCHHHEEECCCCCEEEccCCcceecccc-----------------CccCcCCCcCccCHHHhcCCCCCCchhhhHHHH
Confidence 999999999999999999999998643211 012246899999999987535588999999999
Q ss_pred HHHHHhhc---CCchhHH---HHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccCCCC
Q 000993 623 IVFFELWH---PFSTAME---RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQ 691 (1196)
Q Consensus 623 viLyELlt---Pf~~~~~---~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~~~~ 691 (1196)
|++|+|++ ||..... .............. ....++++.++|++||..||.+|| ++.++++|+||..
T Consensus 184 ~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~ 260 (279)
T cd05633 184 CMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVEL---PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKG 260 (279)
T ss_pred HHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCC---ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccC
Confidence 99999997 7753321 11111111111112 223567899999999999999999 6999999999998
Q ss_pred chHH
Q 000993 692 MEYE 695 (1196)
Q Consensus 692 ~~~~ 695 (1196)
..+.
T Consensus 261 ~~~~ 264 (279)
T cd05633 261 IDWQ 264 (279)
T ss_pred CCHh
Confidence 7643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-34 Score=320.50 Aligned_cols=250 Identities=19% Similarity=0.291 Sum_probs=197.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
+++|++.+.||+|+||+||+|.+. .++..||+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~---- 78 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQ---- 78 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEec----
Confidence 468999999999999999999863 356789999886432 23344678899999999999999999988632
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-----------------CCCC
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-----------------DHFD 517 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-----------------~~l~ 517 (1196)
....|++|||++ ++|.+++... ..++
T Consensus 79 ------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 122 (283)
T cd05090 79 ------------------------------------EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLD 122 (283)
T ss_pred ------------------------------------CCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccC
Confidence 345799999997 5999988532 2378
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcccc
Q 000993 518 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 597 (1196)
Q Consensus 518 e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT 597 (1196)
+.++..++.||+.||+|||++|++||||||+|||++.++.+||+|||+++....... ........++
T Consensus 123 ~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~ 189 (283)
T cd05090 123 HGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADY-------------YRVQPKSLLP 189 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCCcc-------------eecccCCCcc
Confidence 888999999999999999999999999999999999999999999999986532210 0112334567
Q ss_pred ccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCC
Q 000993 598 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 673 (1196)
Q Consensus 598 ~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~d 673 (1196)
..|+|||++.+ ..++.++|||||||++|||++ ||........ ..... ....++.....++.+.+++.+||+.|
T Consensus 190 ~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~ 266 (283)
T cd05090 190 IRWMPPEAIMY-GKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEV-IEMVR-KRQLLPCSEDCPPRMYSLMTECWQEG 266 (283)
T ss_pred ceecChHHhcc-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHH-cCCcCCCCCCCCHHHHHHHHHHcccC
Confidence 88999999987 568999999999999999996 7765544333 22222 22233344456778999999999999
Q ss_pred CCCCCCHHHHHhc
Q 000993 674 PSDRPSATELLQD 686 (1196)
Q Consensus 674 P~~RPta~eiL~~ 686 (1196)
|.+||++.+|+++
T Consensus 267 p~~Rp~~~~i~~~ 279 (283)
T cd05090 267 PSRRPRFKDIHTR 279 (283)
T ss_pred cccCcCHHHHHHH
Confidence 9999999999875
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-34 Score=317.57 Aligned_cols=248 Identities=29% Similarity=0.458 Sum_probs=201.9
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCCc
Q 000993 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 467 (1196)
Q Consensus 389 LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 467 (1196)
||.|+||.||+|++..+++.||+|++..... .......+.+|+.+++.++||||+++++.+.+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------------- 64 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKD---------------- 64 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEc----------------
Confidence 6999999999999998999999999975442 23345679999999999999999999987632
Q ss_pred ccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCC
Q 000993 468 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 546 (1196)
Q Consensus 468 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLK 546 (1196)
...+|++|||++ ++|.+++.+...+++..+..++.||+.||+|||+++++|+|||
T Consensus 65 ------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~ 120 (262)
T cd05572 65 ------------------------KKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLK 120 (262)
T ss_pred ------------------------CCccEEEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCC
Confidence 346799999996 5999999888889999999999999999999999999999999
Q ss_pred cCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHH
Q 000993 547 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 626 (1196)
Q Consensus 547 p~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLy 626 (1196)
|+||+++.++.++|+|||++....... ......|++.|+|||.+.+ ..++.++|+||||+++|
T Consensus 121 ~~nilv~~~~~~~l~df~~~~~~~~~~----------------~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~il~ 183 (262)
T cd05572 121 PENLLLDSNGYVKLVDFGFAKKLKSGQ----------------KTWTFCGTPEYVAPEIILN-KGYDFSVDYWSLGILLY 183 (262)
T ss_pred HHHEEEcCCCCEEEeeCCcccccCccc----------------ccccccCCcCccChhHhcC-CCCCChhhhhhhHHHHH
Confidence 999999999999999999997653211 1123468899999999877 56899999999999999
Q ss_pred Hhhc---CCchhH--HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhccCCCCchH
Q 000993 627 ELWH---PFSTAM--ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPPQMEY 694 (1196)
Q Consensus 627 ELlt---Pf~~~~--~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~~~~~~~~~ 694 (1196)
+|++ ||.... .......... ....+......++++.++|.+||+.||.+||+ ++++++||||....+
T Consensus 184 ~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~ 260 (262)
T cd05572 184 ELLTGRPPFGEDDEDPMEIYNDILK-GNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDW 260 (262)
T ss_pred HHHhCCCCcCCCCCCHHHHHHHHhc-cCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCC
Confidence 9996 776554 3333333221 11122222233678999999999999999999 999999999987654
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=328.16 Aligned_cols=264 Identities=25% Similarity=0.324 Sum_probs=204.0
Q ss_pred CceEEeeeccCCcEEEEEEEEccC--CcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLD--GRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~--g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+|++.+.||+|+||.||+|++..+ +..||||++............+.+|+.+++.+ +||||+++++.+....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~----- 75 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFP----- 75 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecc-----
Confidence 488999999999999999999988 89999999864333333456788999999999 5999999987653210
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
.....+|++|+|++++|.+++.....+++..++.++.||+.||+|||++
T Consensus 76 -------------------------------~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 124 (332)
T cd07857 76 -------------------------------GNFNELYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSA 124 (332)
T ss_pred -------------------------------ccCCcEEEEEecccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1134578999999999999998888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++.+....... ........||+.|+|||++.+...++.++||
T Consensus 125 givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~-----------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di 193 (332)
T cd07857 125 NVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGEN-----------AGFMTEYVATRWYRAPEIMLSFQSYTKAIDV 193 (332)
T ss_pred CcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccc-----------cccccCcccCccccCcHHHhCCCCCCcHHHH
Confidence 99999999999999999999999999998654221110 0112345789999999988764568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhh-----------------------hc-----CCCCCccccCCHHHHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLK-----------------------QK-----GELPPSWVAKFSEQESLLR 667 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~-----------------------~~-----~~~p~~~~~~~~~l~~LI~ 667 (1196)
|||||++|+|++ ||............+. .. ..++......+..+.+++.
T Consensus 194 ~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 273 (332)
T cd07857 194 WSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLE 273 (332)
T ss_pred HHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHH
Confidence 999999999996 6654322111111000 00 0011112234568899999
Q ss_pred HcccCCCCCCCCHHHHHhccCCCCc
Q 000993 668 RLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
+||+.||.+|||+.+++.|+|+...
T Consensus 274 ~~l~~~P~~R~t~~~ll~~~~~~~~ 298 (332)
T cd07857 274 KLLAFDPTKRISVEEALEHPYLAIW 298 (332)
T ss_pred HHccCCcccCCCHHHHhcChhhhhh
Confidence 9999999999999999999997543
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=333.04 Aligned_cols=262 Identities=26% Similarity=0.419 Sum_probs=207.6
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++.+.||+|+||.||+|++..+++.||||++............+.+|+.+++.++||||+++++++.....
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---- 88 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASS---- 88 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccc----
Confidence 3478999999999999999999999999999999987544344445678899999999999999999876632110
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
......+|+|+||++++|.+++.. .++++..++.++.||+.||+|||++
T Consensus 89 ------------------------------~~~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~ 137 (343)
T cd07851 89 ------------------------------LEDFQDVYLVTHLMGADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSA 137 (343)
T ss_pred ------------------------------ccccccEEEEEecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 012345899999999999998865 5699999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+||+++.++.+||+|||++...... .....+++.|+|||.+.+...++.++||
T Consensus 138 gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv 199 (343)
T cd07851 138 GIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE------------------MTGYVATRWYRAPEIMLNWMHYNQTVDI 199 (343)
T ss_pred CeecCCCCHHHeEECCCCCEEEcccccccccccc------------------ccCCcccccccCHHHHhCCCCCCchHhH
Confidence 9999999999999999999999999999754211 1334678899999998764467899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC----------------------------CccccCCHHHHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP----------------------------PSWVAKFSEQESLLR 667 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p----------------------------~~~~~~~~~l~~LI~ 667 (1196)
|||||++|||++ ||................+..+ ......++.+.++|+
T Consensus 200 wslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~ 279 (343)
T cd07851 200 WSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLE 279 (343)
T ss_pred HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHH
Confidence 999999999997 6754443332222211111000 111234678899999
Q ss_pred HcccCCCCCCCCHHHHHhccCCCCch
Q 000993 668 RLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
+||+.||.+|||+.++++|+|+.+..
T Consensus 280 ~~l~~~P~~Rpt~~ell~h~~~~~~~ 305 (343)
T cd07851 280 KMLVLDPDKRITAAEALAHPYLAEYH 305 (343)
T ss_pred HhCCCChhhCCCHHHHhcCCCccccC
Confidence 99999999999999999999998754
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-34 Score=330.10 Aligned_cols=261 Identities=24% Similarity=0.385 Sum_probs=205.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|.+++.||+|+||.||+|.+..+|..||||++............+.+|+.+|+.++||||+++++++.....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---- 88 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLS---- 88 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcc----
Confidence 3478999999999999999999999999999999986543333445678899999999999999999988733210
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
......+|+||+|++++|.+++.. ..+++..++.++.||+.||+|||++
T Consensus 89 ------------------------------~~~~~~~~lv~e~~~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~ 137 (343)
T cd07880 89 ------------------------------LDRFHDFYLVMPFMGTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAA 137 (343)
T ss_pred ------------------------------ccccceEEEEEecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 011245799999998899888764 5799999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+||+++.++.+||+|||++..... ......+++.|+|||.+.+...++.++|+
T Consensus 138 gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 199 (343)
T cd07880 138 GIIHRDLKPGNLAVNEDCELKILDFGLARQTDS------------------EMTGYVVTRWYRAPEVILNWMHYTQTVDI 199 (343)
T ss_pred CeecCCCCHHHEEEcCCCCEEEeeccccccccc------------------CccccccCCcccCHHHHhCCCCCCcHHHH
Confidence 999999999999999999999999999875321 11234678999999998764458899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC----------------------------CCccccCCHHHHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL----------------------------PPSWVAKFSEQESLLR 667 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~----------------------------p~~~~~~~~~l~~LI~ 667 (1196)
|||||++|+|++ ||................... ...+...++.+.++|.
T Consensus 200 ~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 279 (343)
T cd07880 200 WSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLE 279 (343)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHH
Confidence 999999999996 776543322222211111100 0111234567899999
Q ss_pred HcccCCCCCCCCHHHHHhccCCCCc
Q 000993 668 RLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
+||+.||.+|||+.++++|+||...
T Consensus 280 ~~l~~dP~~R~t~~~~l~~~~~~~~ 304 (343)
T cd07880 280 KMLVLDAESRITAAEALAHPYFEEF 304 (343)
T ss_pred HHcCCChhhCCCHHHHhcCccHhhh
Confidence 9999999999999999999999865
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=313.91 Aligned_cols=256 Identities=25% Similarity=0.438 Sum_probs=205.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC---CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK---SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~---~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.+|++.+.||+|+||.||+|.++.+++.||+|.+..... .......+.+|+.+++.++||||+++++++...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~----- 76 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP----- 76 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC-----
Confidence 479999999999999999999999999999998864321 233456788999999999999999999887431
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....++++|||++ ++|.+++.....+++..++.++.||+.||.|||
T Consensus 77 ---------------------------------~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH 123 (264)
T cd06653 77 ---------------------------------EEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLH 123 (264)
T ss_pred ---------------------------------CCCEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1346789999997 489999988788999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++|++|+||||+||+++.++.++|+|||+++........ ....+...|+..|+|||.+.+ ..++.++
T Consensus 124 ~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 190 (264)
T cd06653 124 SNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMS------------GTGIKSVTGTPYWMSPEVISG-EGYGRKA 190 (264)
T ss_pred hCCEecCCCCHHHEEEcCCCCEEECcccccccccccccc------------CccccccCCcccccCHhhhcC-CCCCccc
Confidence 999999999999999999999999999999864321100 001123568999999999987 5688999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|+|||||++|+|++ ||.............. ....+..+...++.+.++|.+||. +|..||++.+++.|||.
T Consensus 191 Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 191 DVWSVACTVVEMLTEKPPWAEYEAMAAIFKIAT-QPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred cHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHc-CCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 99999999999996 7765544444433322 222222334456789999999999 57999999999999873
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=316.96 Aligned_cols=253 Identities=20% Similarity=0.267 Sum_probs=196.5
Q ss_pred eEEeeeccCCcEEEEEEEEccCCc--EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 384 EELQPLGHGGFGHVVLCKNKLDGR--HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 384 ~~~~~LG~G~fG~Vy~a~~~~~g~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
.+.+.||+|+||.||+|.+..++. .+|+|.++...........+.+|+.+++.++||||+++++.+.....
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~------- 74 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVE------- 74 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCc-------
Confidence 456889999999999999987765 69999887655555556788999999999999999999988743210
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh------cCCCCHHHHHHHHHHHHHHHHH
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES------YDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~------~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
.......+++|||++ ++|.+++.. ...+++..++.++.||+.||+|
T Consensus 75 ---------------------------~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 127 (272)
T cd05075 75 ---------------------------SEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEY 127 (272)
T ss_pred ---------------------------ccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHH
Confidence 011235689999997 588887742 2348899999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||+++|+||||||+|||++.++.+||+|||+++....... ........+++.|+|||.+.+ ..++.
T Consensus 128 lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~~~~~~~~pe~~~~-~~~~~ 193 (272)
T cd05075 128 LSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDY-------------YRQGRIAKMPVKWIAIESLAD-RVYTT 193 (272)
T ss_pred HHHCCeeccccchhheEEcCCCCEEECCCCcccccCcccc-------------eecCCcccCCcccCCHHHccC-CCcCh
Confidence 9999999999999999999999999999999986532210 011123356778999999987 56899
Q ss_pred cchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 615 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 615 ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++|||||||++|||++ ||........... +. ....++.....+..+.++|.+||+.||.+|||+.+++++
T Consensus 194 ~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 194 KSDVWSFGVTMWEIATRGQTPYPGVENSEIYDY-LR-QGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HH-cCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 9999999999999986 6655444333322 22 222233334556789999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=317.06 Aligned_cols=255 Identities=29% Similarity=0.485 Sum_probs=201.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC--------chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS--------LPVNDRILREVATLSRLQHQHVVRYYQAWFETG 453 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~--------~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~ 453 (1196)
+|.+.+.||.|+||.||+|.+..+|+.||+|.++..... ....+.+.+|+.+++.++||||+++++++..
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-- 79 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETT-- 79 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEecc--
Confidence 467788999999999999999989999999988643211 1123467889999999999999999987622
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL 532 (1196)
...+++||||++ ++|.+++.....+++..+..++.||+.||
T Consensus 80 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l 121 (272)
T cd06629 80 --------------------------------------EEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGL 121 (272)
T ss_pred --------------------------------------CCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence 346799999996 59999998888899999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC-C
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP-K 611 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~ 611 (1196)
.|||+++++||||||+||+++.++.++|+|||+++...... .........|+..|+|||.+.... .
T Consensus 122 ~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-------------~~~~~~~~~~~~~y~~PE~~~~~~~~ 188 (272)
T cd06629 122 AYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIY-------------DNDQNMSMQGSVFWMAPEVIHSYSQG 188 (272)
T ss_pred HHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccccc-------------cccccccccCCccccCHHHhccccCC
Confidence 99999999999999999999999999999999997532110 001123456889999999987633 4
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhc--CCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~--~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
++.++|+||||+++|+|++ ||......+......... ...+. .....+..+.++|.+||..+|.+|||++++++
T Consensus 189 ~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 189 YSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred CCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 7899999999999999997 665443333332222111 11222 12334678999999999999999999999999
Q ss_pred ccCC
Q 000993 686 DALP 689 (1196)
Q Consensus 686 ~~~~ 689 (1196)
|+|+
T Consensus 269 ~~~~ 272 (272)
T cd06629 269 HPFI 272 (272)
T ss_pred CCCC
Confidence 9985
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=314.25 Aligned_cols=248 Identities=28% Similarity=0.518 Sum_probs=198.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++.+.||.|+||.||+|.+..+|+.||+|.++.... .......+.+|+.+++.++|+||+++++++.+
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~-------- 73 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIE-------- 73 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeec--------
Confidence 689999999999999999999999999999999875433 22335678999999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+++|||++ ++|..++.. ...+++.+++.++.||+.||+|
T Consensus 74 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 121 (267)
T cd08224 74 --------------------------------NNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEH 121 (267)
T ss_pred --------------------------------CCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHH
Confidence 346799999997 599988854 3458999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+||+++.++.++|+|||++....... .......+++.|+|||.+.+ ..++.
T Consensus 122 lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~---------------~~~~~~~~~~~y~apE~~~~-~~~~~ 185 (267)
T cd08224 122 MHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT---------------TAAHSLVGTPYYMSPERIHE-NGYNF 185 (267)
T ss_pred HHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCC---------------cccceecCCccccCHHHhcc-CCCCc
Confidence 999999999999999999999999999999987543211 01123468899999999887 56899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHH-HHHHHHHhhhcCCCCCccc-cCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 615 KADMYSLGIVFFELWH---PFSTAME-RQIVLSDLKQKGELPPSWV-AKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~-~~~~~~~l~~~~~~p~~~~-~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
++|||||||++|+|++ ||..... ......... ....++... ..+..+.++|.+||..+|.+|||+.+|++
T Consensus 186 ~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 186 KSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE-KCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred hhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhh-cCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999999999999996 6643321 111122222 222332222 45568999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-34 Score=318.19 Aligned_cols=248 Identities=27% Similarity=0.512 Sum_probs=198.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++.+.||+|+||.||+|.++.+|+.||||.+..... ......++.+|+.+++.++||||++++++|.+
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-------- 73 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-------- 73 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEe--------
Confidence 678899999999999999999999999999998865432 23345678899999999999999999988743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh----cCCCCHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...++++|||+++ +|.+++.. ...+++..++.++.||+.||+|
T Consensus 74 --------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 121 (267)
T cd08229 74 --------------------------------DNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEH 121 (267)
T ss_pred --------------------------------CCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHH
Confidence 3567999999975 89888763 3458999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++|++|+||||+||+++.++.++|+|||++....... .......|++.|+|||.+.+ ..++.
T Consensus 122 LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~~~ape~~~~-~~~~~ 185 (267)
T cd08229 122 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT---------------TAAHSLVGTPYYMSPERIHE-NGYNF 185 (267)
T ss_pred HHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC---------------cccccccCCcCccCHHHhcC-CCccc
Confidence 999999999999999999999999999999987643211 01123468899999999987 56889
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHH-HHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMER-QIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~-~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
++|+||||+++|+|++ ||...... ......+. ....++ .....++.+.++|.+||..||.+|||+.+|++
T Consensus 186 ~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 186 KSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE-QCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred hhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhh-cCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 9999999999999996 66543221 12222222 222222 22345678999999999999999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-34 Score=319.61 Aligned_cols=253 Identities=28% Similarity=0.439 Sum_probs=203.5
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC---CCCeeeeeeeeeecCccccC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ---HQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~---HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.|+..+.||.|+||.||+|.+..+++.||+|.++... ......++.+|+.+++.++ ||||++++++|.+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~------- 73 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT-PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK------- 73 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC-CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee-------
Confidence 5778899999999999999999999999999987543 2334567889999999996 9999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....|++|||+++ +|.+++.. ..+++..++.++.||+.||+|||+
T Consensus 74 ---------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~ 119 (277)
T cd06917 74 ---------------------------------GPRLWIIMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHK 119 (277)
T ss_pred ---------------------------------CCEEEEEEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3467999999965 89888865 478999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
.||+||||+|+||+++.++.++|+|||++....... .......|+..|+|||.+.+...++.++|
T Consensus 120 ~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 184 (277)
T cd06917 120 VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS---------------SKRSTFVGTPYWMAPEVITEGKYYDTKAD 184 (277)
T ss_pred CCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc---------------cccccccCCcceeCHHHhccCCccccchh
Confidence 999999999999999999999999999997653221 01223468899999999876455789999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccc-cCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWV-AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~-~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
+|||||++|+|++ ||............. ....+.... ..+.++.+++.+||+.||.+||++.+++.|+|+.+..
T Consensus 185 v~slG~~l~~ll~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 185 IWSLGITIYEMATGNPPYSDVDAFRAMMLIP--KSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred HHHHHHHHHHHHhCCCCCCCCChhhhhhccc--cCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 9999999999996 776554333222111 111121111 2567899999999999999999999999999997764
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=348.64 Aligned_cols=258 Identities=25% Similarity=0.452 Sum_probs=202.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++++.+.|.+|||+.||+|++...|..||+|.+-.. +....+.+.+|+.+|+.|+ |||||.|++......
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~------ 108 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINR------ 108 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccc------
Confidence 3678899999999999999999988899999988654 4456778999999999996 999999997421100
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
........++|.||||. |+|-+++..+ .+|++.++++|+.|+++|+++||
T Consensus 109 ---------------------------~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH 161 (738)
T KOG1989|consen 109 ---------------------------SSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMH 161 (738)
T ss_pred ---------------------------cCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHh
Confidence 00011345789999998 6999999843 56999999999999999999999
Q ss_pred hCC--CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccc--cCcCccccccCCCchhccCC--C
Q 000993 537 GQG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV--DGTGQVGTYFYTAPEIEQGW--P 610 (1196)
Q Consensus 537 s~g--IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~GT~~Y~APE~l~~~--~ 610 (1196)
... |||||||-+||||+.+++.||||||.|+-....- +....... ..-....|+.|.|||.+.-+ .
T Consensus 162 ~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~--------~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~ 233 (738)
T KOG1989|consen 162 YLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSP--------TSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGL 233 (738)
T ss_pred cCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCC--------ccHHHHHHHHHHHHhhCCccccChHHHhhhcCC
Confidence 998 9999999999999999999999999997432110 00000000 11223579999999975422 3
Q ss_pred CCCCcchhHHHHHHHHHhh---cCCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 611 KIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELl---tPf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
..++|+|||+|||+||-|+ +||..... +.++..+..+|+. +.++..+.+||+.||++||.+||++.+++.+
T Consensus 234 pI~eKsDIWALGclLYkLCy~t~PFe~sg~----laIlng~Y~~P~~-p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 234 PIGEKSDIWALGCLLYKLCYFTTPFEESGK----LAILNGNYSFPPF-PNYSDRLKDLIRTMLQPNPDERPNIYQVLEE 307 (738)
T ss_pred CCcchhHHHHHHHHHHHHHHhCCCcCcCcc----eeEEeccccCCCC-ccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 5899999999999999998 49976533 3345556666664 5667899999999999999999999999875
|
|
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=315.35 Aligned_cols=246 Identities=23% Similarity=0.318 Sum_probs=196.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.+|.+.+.||+|+||.||+|.++.+++.||+|++... ......+.+|+.+++.++||||+++++++..
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 73 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--------- 73 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC---chHHHHHHHHHHHHHhCCCCChhheEEEEcC---------
Confidence 5789999999999999999999999999999988632 2234678899999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...++++|||++ ++|.+++... ..+++..++.++.|++.||+|||+
T Consensus 74 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~ 122 (263)
T cd05052 74 -------------------------------EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 122 (263)
T ss_pred -------------------------------CCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 345689999996 5899988653 358999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+|++||||||+||+++.++.+||+|||++......... ......+++.|+|||.+.+ ..++.++|
T Consensus 123 ~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~--------------~~~~~~~~~~y~aPE~~~~-~~~~~~~D 187 (263)
T cd05052 123 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT--------------AHAGAKFPIKWTAPESLAY-NKFSIKSD 187 (263)
T ss_pred CCEeecccCcceEEEcCCCcEEeCCCccccccccceee--------------ccCCCCCccccCCHHHhcc-CCCCchhH
Confidence 99999999999999999999999999999765322100 1112234678999999887 56899999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 618 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 618 VwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||||||++|||++ ||......+.. ..+. ....++.....++++.++|.+||+.||++||++.++++.
T Consensus 188 v~slG~il~el~t~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~ 258 (263)
T cd05052 188 VWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLE-KGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQA 258 (263)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCHHHHH-HHHH-CCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 9999999999986 66544333322 2222 122223334566799999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=317.94 Aligned_cols=257 Identities=26% Similarity=0.456 Sum_probs=202.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|+..+.||.|++|.||+|.+..+++.+|+|.+..... .....++.+|+++++.++||||++++++|.+.
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-------- 71 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN-PDLQKQILRELEINKSCKSPYIVKYYGAFLDE-------- 71 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc-hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEcc--------
Confidence 478999999999999999999998999999999875433 24557799999999999999999999887431
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHH
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
....+|+||||++ ++|.+++.. ...+++..+..++.||+.||+||
T Consensus 72 ------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~l 121 (287)
T cd06621 72 ------------------------------SSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYL 121 (287)
T ss_pred ------------------------------CCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2346899999997 488887643 34588999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|+.|++|+||+|+||+++.++.++|+|||++....... .....++..|+|||.+.+ ..++.+
T Consensus 122 H~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-----------------~~~~~~~~~y~~pE~~~~-~~~~~~ 183 (287)
T cd06621 122 HSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL-----------------AGTFTGTSFYMAPERIQG-KPYSIT 183 (287)
T ss_pred HHCCcccCCCCHHHEEEecCCeEEEeeccccccccccc-----------------cccccCCccccCHHHhcC-CCCCch
Confidence 99999999999999999999999999999986542110 112357889999999887 568999
Q ss_pred chhHHHHHHHHHhhc---CCchhH-----HHHHHHHHhhhc-CCCCCcc---ccCCHHHHHHHHHcccCCCCCCCCHHHH
Q 000993 616 ADMYSLGIVFFELWH---PFSTAM-----ERQIVLSDLKQK-GELPPSW---VAKFSEQESLLRRLMSPSPSDRPSATEL 683 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~-----~~~~~~~~l~~~-~~~p~~~---~~~~~~l~~LI~~cL~~dP~~RPta~ei 683 (1196)
+|||||||++|+|++ ||.... ..+......... ..++... ...++.+.++|.+||..||.+|||+.++
T Consensus 184 ~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ei 263 (287)
T cd06621 184 SDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDM 263 (287)
T ss_pred hhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHH
Confidence 999999999999997 665431 111111111101 1111111 1234578999999999999999999999
Q ss_pred HhccCCCCchH
Q 000993 684 LQDALPPQMEY 694 (1196)
Q Consensus 684 L~~~~~~~~~~ 694 (1196)
++|+|+.+...
T Consensus 264 l~~~~~~~~~~ 274 (287)
T cd06621 264 LEHPWIKAQMK 274 (287)
T ss_pred HhCcccccccc
Confidence 99999976543
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=348.61 Aligned_cols=264 Identities=23% Similarity=0.347 Sum_probs=192.2
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCC-cEEEEEEEe---------------cCCCCchhHHHHHHHHHHHHhcCCC
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDG-RHYAVKKIR---------------LKDKSLPVNDRILREVATLSRLQHQ 440 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g-~~vAVK~i~---------------~~~~~~~~~~~~~~Ev~iL~~L~Hp 440 (1196)
..+.++|++++.||+|+||+||+|.++... ..+++|.+. ...........+.+|+.+|+.++||
T Consensus 144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hp 223 (501)
T PHA03210 144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHE 223 (501)
T ss_pred hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCC
Confidence 345689999999999999999999875432 222222111 0011222345688999999999999
Q ss_pred CeeeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-----CC
Q 000993 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-----DH 515 (1196)
Q Consensus 441 nIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-----~~ 515 (1196)
|||++++++.. ....|++|+++.++|..++... ..
T Consensus 224 nIv~l~~~~~~----------------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~ 263 (501)
T PHA03210 224 NILKIEEILRS----------------------------------------EANTYMITQKYDFDLYSFMYDEAFDWKDR 263 (501)
T ss_pred CcCcEeEEEEE----------------------------------------CCeeEEEEeccccCHHHHHhhcccccccc
Confidence 99999988732 3467999999998888876432 23
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcc
Q 000993 516 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 595 (1196)
Q Consensus 516 l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (1196)
.....++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+..... ......+
T Consensus 264 ~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~--------------~~~~~~~ 329 (501)
T PHA03210 264 PLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKERE--------------AFDYGWV 329 (501)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccc--------------ccccccc
Confidence 44667889999999999999999999999999999999999999999999986532110 1123457
Q ss_pred ccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchh--HHHHHHHHHhhhcC----CCC-------------
Q 000993 596 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTA--MERQIVLSDLKQKG----ELP------------- 652 (1196)
Q Consensus 596 GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~--~~~~~~~~~l~~~~----~~p------------- 652 (1196)
||+.|+|||++.+ ..++.++|||||||+||||++ ||... .........+.... .+|
T Consensus 330 gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~ 408 (501)
T PHA03210 330 GTVATNSPEILAG-DGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSA 408 (501)
T ss_pred CCcCCCCchhhcC-CCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhh
Confidence 9999999999988 568999999999999999996 44321 11111111111000 001
Q ss_pred ----------Ccc--ccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchHH
Q 000993 653 ----------PSW--VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYE 695 (1196)
Q Consensus 653 ----------~~~--~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~~ 695 (1196)
+.. ......+.++|.+||+.||.+|||+.++|+||||.....+
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~~~ 463 (501)
T PHA03210 409 EIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEEEE 463 (501)
T ss_pred hcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCCch
Confidence 000 1123456788999999999999999999999999876544
|
|
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=309.30 Aligned_cols=256 Identities=32% Similarity=0.497 Sum_probs=208.7
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|...+.||+|++|.||+|.+..+++.|++|++............+.+|+..+++++||||+++++.+.+.
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--------- 71 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDE--------- 71 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecC---------
Confidence 47788999999999999999999999999999976654445677899999999999999999999887431
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
....++++|||++ ++|.+++.....+++..++.++.|++.||+|||+.|+
T Consensus 72 -----------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 122 (260)
T cd06606 72 -----------------------------EKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGI 122 (260)
T ss_pred -----------------------------CCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 0256899999995 6999999888899999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+|+||+|+||+++.++.++|+|||.+......... .......++..|+|||.+.+ ..++.++||||
T Consensus 123 ~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-------------~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~s 188 (260)
T cd06606 123 VHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG-------------EGTGSVRGTPYWMAPEVIRG-EEYGRAADIWS 188 (260)
T ss_pred cccCCCHHHEEEcCCCCEEEcccccEEeccccccc-------------ccccCCCCCccccCHhhhcC-CCCCchhhHHH
Confidence 99999999999999999999999999865432110 01123468899999999887 45899999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
||+++|+|++ ||...................+......+..+.++|.+||+.||.+||++.++++|+|+
T Consensus 189 lG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 189 LGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred HHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 9999999997 77655422222222222223333333446789999999999999999999999999996
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=312.72 Aligned_cols=242 Identities=22% Similarity=0.341 Sum_probs=189.7
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSG 466 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g 466 (1196)
+.||+|+||.||+|+++.+++.||+|.+... ........+.+|+.+++.++||||++++++|..
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------------- 64 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ--------------- 64 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCcc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC---------------
Confidence 3689999999999999999999999987532 233445679999999999999999999988732
Q ss_pred cccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccC
Q 000993 467 TLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544 (1196)
Q Consensus 467 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrD 544 (1196)
...+|+||||++ ++|.+++... ..+++..++.++.|++.||+|||++|++|||
T Consensus 65 -------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d 119 (252)
T cd05084 65 -------------------------KQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRD 119 (252)
T ss_pred -------------------------CCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence 345799999996 5899998754 4589999999999999999999999999999
Q ss_pred CCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHH
Q 000993 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 624 (1196)
Q Consensus 545 LKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGvi 624 (1196)
|||+|||++.++.+||+|||++........ ........++..|+|||.+.+ ..++.++|||||||+
T Consensus 120 l~p~nil~~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i 185 (252)
T cd05084 120 LAARNCLVTEKNVLKISDFGMSREEEDGVY-------------ASTGGMKQIPVKWTAPEALNY-GRYSSESDVWSFGIL 185 (252)
T ss_pred cchheEEEcCCCcEEECccccCcccccccc-------------cccCCCCCCceeecCchhhcC-CCCChHHHHHHHHHH
Confidence 999999999999999999999875421100 000111223567999999887 568999999999999
Q ss_pred HHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 625 FFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 625 LyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
+|||++ ||.......... ... ....++.....+..+.+|+.+||+.+|++|||+.++++
T Consensus 186 l~e~~~~~~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 186 LWEAFSLGAVPYANLSNQQTRE-AIE-QGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred HHHHHhCCCCCccccCHHHHHH-HHH-cCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 999985 565444333222 221 12222233345678999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=317.35 Aligned_cols=249 Identities=21% Similarity=0.283 Sum_probs=194.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~-----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
++|++.+.||+|+||.||+|.++. ++..||||++... .......++.+|+.+++.++||||+++++++.+
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~---- 80 (277)
T cd05062 6 EKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ---- 80 (277)
T ss_pred HHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC----
Confidence 679999999999999999998752 3568999987532 223345678899999999999999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----------CCCHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------HFDKELAWHL 524 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------~l~e~~~~~i 524 (1196)
....++||||++ ++|.+++.... .++...+..+
T Consensus 81 ------------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (277)
T cd05062 81 ------------------------------------GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQM 124 (277)
T ss_pred ------------------------------------CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHH
Confidence 345789999997 59999886532 3567788999
Q ss_pred HHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCch
Q 000993 525 FRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 604 (1196)
Q Consensus 525 ~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 604 (1196)
+.|++.||+|||++|++||||||+||+++.++.+||+|||+++........ .......+++.|||||
T Consensus 125 ~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aPE 191 (277)
T cd05062 125 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-------------RKGGKGLLPVRWMSPE 191 (277)
T ss_pred HHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCccee-------------ecCCCCccCHhhcChh
Confidence 999999999999999999999999999999999999999998754321110 0112235678899999
Q ss_pred hccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH
Q 000993 605 IEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA 680 (1196)
Q Consensus 605 ~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta 680 (1196)
++.+ ..++.++|||||||++|||++ ||............ . ....++.....++.+.+++.+||+.||.+|||+
T Consensus 192 ~~~~-~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~ 268 (277)
T cd05062 192 SLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFV-M-EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 268 (277)
T ss_pred Hhhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-H-cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence 9987 568999999999999999985 66554443332222 2 222222233456789999999999999999999
Q ss_pred HHHHhc
Q 000993 681 TELLQD 686 (1196)
Q Consensus 681 ~eiL~~ 686 (1196)
.+++++
T Consensus 269 ~e~l~~ 274 (277)
T cd05062 269 LEIISS 274 (277)
T ss_pred HHHHHH
Confidence 999874
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-34 Score=319.73 Aligned_cols=250 Identities=22% Similarity=0.320 Sum_probs=197.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~-----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.++|.+.+.||+|+||.||+|.+.. ++..||||+++... .......+.+|+++|+.++||||+++++++..
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--- 79 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA-SNDARKDFEREAELLTNFQHENIVKFYGVCTE--- 79 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC-CHHHHHHHHHHHHHHHhcCCCCchheeeEEec---
Confidence 3578899999999999999998853 36789999986432 22345789999999999999999999988732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--------------CCCCHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--------------DHFDKE 519 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--------------~~l~e~ 519 (1196)
....|++|||++ ++|.+++... ..+++.
T Consensus 80 -------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~ 122 (280)
T cd05049 80 -------------------------------------GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLS 122 (280)
T ss_pred -------------------------------------CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHH
Confidence 245799999996 5999998654 237888
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcccccc
Q 000993 520 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 599 (1196)
Q Consensus 520 ~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 599 (1196)
.+..++.||+.||+|||++|++||||||+||+++.++.+||+|||+++.+..... ........+++.
T Consensus 123 ~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~-------------~~~~~~~~~~~~ 189 (280)
T cd05049 123 QLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDY-------------YRVGGHTMLPIR 189 (280)
T ss_pred HHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccceecccCcc-------------eecCCCCcccce
Confidence 9999999999999999999999999999999999999999999999875422110 001123356789
Q ss_pred CCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCC
Q 000993 600 YTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 675 (1196)
Q Consensus 600 Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~ 675 (1196)
|+|||++.+ ..++.++|||||||++|||++ ||............. .+..+......+..+.+++.+||+.||.
T Consensus 190 y~aPE~~~~-~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~ 266 (280)
T cd05049 190 WMPPESIMY-RKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECIT--QGRLLQRPRTCPSEVYDIMLGCWKRDPQ 266 (280)
T ss_pred ecChhhhcc-CCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH--cCCcCCCCCCCCHHHHHHHHHHcCCCcc
Confidence 999999987 568999999999999999995 766554444333332 2233333345667899999999999999
Q ss_pred CCCCHHHHHhc
Q 000993 676 DRPSATELLQD 686 (1196)
Q Consensus 676 ~RPta~eiL~~ 686 (1196)
+||++.++++.
T Consensus 267 ~Rp~~~eil~~ 277 (280)
T cd05049 267 QRINIKDIHER 277 (280)
T ss_pred cCCCHHHHHHH
Confidence 99999999863
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=317.50 Aligned_cols=249 Identities=23% Similarity=0.344 Sum_probs=197.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCc----EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGR----HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.++|++++.||.|+||+||+|++..+|+ .||+|+++.. ........+.+|+.+++.++||||+++++.+..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---- 80 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLREN-TSPKANKEILDEAYVMAGVGSPYVCRLLGICLT---- 80 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCC-CCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC----
Confidence 3689999999999999999999887776 4899988643 333445678899999999999999999987732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~ 533 (1196)
...+++|||++ |+|.+++... ..+++..++.++.||+.||+
T Consensus 81 -------------------------------------~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~ 123 (279)
T cd05109 81 -------------------------------------STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMS 123 (279)
T ss_pred -------------------------------------CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHH
Confidence 23578999997 6999988764 56999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||+++|+||||||+|||++.++.+||+|||+++....... ........+++.|+|||.+.+ ..++
T Consensus 124 ~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~-------------~~~~~~~~~~~~y~~PE~~~~-~~~~ 189 (279)
T cd05109 124 YLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET-------------EYHADGGKVPIKWMALESILH-RRFT 189 (279)
T ss_pred HHHHCCeeccccccceEEEcCCCcEEECCCCceeecccccc-------------eeecCCCccchhhCCHHHhcc-CCCC
Confidence 99999999999999999999999999999999986532110 001122345678999999987 5689
Q ss_pred CcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++|||||||++|||++ ||......... ..+. ....++.....+.++.+++.+||+.||++||++.+++..
T Consensus 190 ~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~ 264 (279)
T cd05109 190 HQSDVWSYGVTVWELMTFGAKPYDGIPAREIP-DLLE-KGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDE 264 (279)
T ss_pred chhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH-HHHH-CCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999999875 66544333222 2222 333333445567789999999999999999999999853
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=327.32 Aligned_cols=272 Identities=25% Similarity=0.384 Sum_probs=205.6
Q ss_pred CCceE-EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCch------------hHHHHHHHHHHHHhcCCCCeeeeee
Q 000993 381 NDFEE-LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP------------VNDRILREVATLSRLQHQHVVRYYQ 447 (1196)
Q Consensus 381 ~~y~~-~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~------------~~~~~~~Ev~iL~~L~HpnIV~l~~ 447 (1196)
++|.. .+.||.|+||+||+|.++.+++.||||++........ ....+.+|+.+++.++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 45554 4679999999999999999999999999875432210 0124778999999999999999998
Q ss_pred eeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHH
Q 000993 448 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQ 527 (1196)
Q Consensus 448 ~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~q 527 (1196)
++.. ..++|++|||++++|.+++.....+++..+..++.|
T Consensus 88 ~~~~----------------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~q 127 (335)
T PTZ00024 88 VYVE----------------------------------------GDFINLVMDIMASDLKKVVDRKIRLTESQVKCILLQ 127 (335)
T ss_pred EEec----------------------------------------CCcEEEEEeccccCHHHHHHhcCCCCHHHHHHHHHH
Confidence 8732 346799999999999999988888999999999999
Q ss_pred HHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 528 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 528 Ia~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
|+.||+|||++|++||||||+||+++.++.+||+|||+++.............. .............+++.|+|||.+.
T Consensus 128 l~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~y~aPE~~~ 206 (335)
T PTZ00024 128 ILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKD-ETMQRREEMTSKVVTLWYRAPELLM 206 (335)
T ss_pred HHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccceeeccccccccccccc-ccccccccccccccccCCCCChhcc
Confidence 999999999999999999999999999999999999999865422211100000 0000111223446789999999988
Q ss_pred CCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC---------------------CC----ccccCC
Q 000993 608 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL---------------------PP----SWVAKF 659 (1196)
Q Consensus 608 ~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~---------------------p~----~~~~~~ 659 (1196)
+...++.++|+|||||++|||++ ||................... ++ .....+
T Consensus 207 ~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (335)
T PTZ00024 207 GAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNAS 286 (335)
T ss_pred cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCC
Confidence 75557999999999999999997 665444333222211110000 00 012235
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 660 SEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 660 ~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
.++.++|++||+.+|.+|||+++++.|+||....
T Consensus 287 ~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~ 320 (335)
T PTZ00024 287 DDAIDLLQSLLKLNPLERISAKEALKHEYFKSDP 320 (335)
T ss_pred hHHHHHHHHHcCCCchhccCHHHHhcCcccCCCC
Confidence 6788999999999999999999999999998764
|
|
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=319.00 Aligned_cols=253 Identities=29% Similarity=0.445 Sum_probs=204.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
..|+.++.||.|+||.||+|.+..++..||+|++..... ......+.+|+.+++.++||||+++++++.+
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 73 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLK--------- 73 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE---------
Confidence 357788999999999999999998999999999875432 3445678999999999999999999998743
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+|+||||+++ +|.+++.. +++++.++..++.|++.||+|||+++
T Consensus 74 -------------------------------~~~~~lv~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ 121 (277)
T cd06640 74 -------------------------------GTKLWIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEK 121 (277)
T ss_pred -------------------------------CCEEEEEEecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3568999999975 89888864 56899999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
++|+||+|+||+++.++.++|+|||++....... .......++..|+|||++.+ ..++.++|+|
T Consensus 122 ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~apE~~~~-~~~~~~~Dv~ 185 (277)
T cd06640 122 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ---------------IKRNTFVGTPFWMAPEVIQQ-SAYDSKADIW 185 (277)
T ss_pred ccCcCCChhhEEEcCCCCEEEcccccceeccCCc---------------cccccccCcccccCHhHhcc-CCCccHHHHH
Confidence 9999999999999999999999999997543211 11123468889999999887 4689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||||++|||++ ||............ .....+......+..+.++|.+||+.+|.+||++.++++|+|+.+..
T Consensus 186 slG~il~el~tg~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06640 186 SLGITAIELAKGEPPNSDMHPMRVLFLI--PKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNA 260 (277)
T ss_pred HHHHHHHHHHHCCCCCCCcChHhHhhhh--hcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcc
Confidence 99999999997 66554443332221 11222323334456889999999999999999999999999987654
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=309.82 Aligned_cols=250 Identities=34% Similarity=0.582 Sum_probs=207.1
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|.+.+.||.|+||.||++.+..+++.||+|++............+.+|+++++.++|||++++++.+..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~---------- 70 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEE---------- 70 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEec----------
Confidence 5889999999999999999999999999999998665555566788999999999999999999987732
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY----DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~----~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....+++|||+++ +|.+++... ..+++..++.++.||+.||+|||
T Consensus 71 ------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh 120 (258)
T cd08215 71 ------------------------------KGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH 120 (258)
T ss_pred ------------------------------CCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 3567999999975 899988764 67999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++|++|+||+|+||+++.++.++|+|||++....... .......|++.|+|||.+.+ ..++.++
T Consensus 121 ~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---------------~~~~~~~~~~~y~~pe~~~~-~~~~~~~ 184 (258)
T cd08215 121 SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV---------------DLAKTVVGTPYYLSPELCQN-KPYNYKS 184 (258)
T ss_pred hCCEecccCChHHeEEcCCCcEEECCccceeecccCc---------------ceecceeeeecccChhHhcc-CCCCccc
Confidence 9999999999999999999999999999997643221 01123478999999999887 4588999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
|+||+|+++|+|++ ||.............. ...++.....+..+.+++++||..+|.+|||+.++++|||+
T Consensus 185 Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 185 DIWSLGCVLYELCTLKHPFEGENLLELALKILK--GQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred cHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 99999999999996 6755544433333322 22333233456789999999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-34 Score=324.85 Aligned_cols=252 Identities=24% Similarity=0.434 Sum_probs=201.2
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
.|+....||.|+||.||+|.+..+++.||+|++..... .....+.+|+.+++.++||||+++++++..
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~---------- 89 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHQNVVEMYKSYLV---------- 89 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc--chHHHHHHHHHHHHhCCCCchhhhhhheee----------
Confidence 44455689999999999999999999999999875433 234568899999999999999999987632
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
....|++|||+++ +|..++.. ..+++..++.++.||+.||+|||++|+
T Consensus 90 ------------------------------~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i 138 (297)
T cd06659 90 ------------------------------GEELWVLMEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGV 138 (297)
T ss_pred ------------------------------CCeEEEEEecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 3567999999975 78776644 568999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+||||||+||+++.++.+||+|||++..+.... .......|++.|+|||++.+ ..++.++||||
T Consensus 139 vH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s 202 (297)
T cd06659 139 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV---------------PKRKSLVGTPYWMAPEVISR-TPYGTEVDIWS 202 (297)
T ss_pred ecCCCCHHHeEEccCCcEEEeechhHhhccccc---------------ccccceecCccccCHHHHcc-CCCCchhhHHH
Confidence 999999999999999999999999987543211 01233578999999999987 56899999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|||++|||++ ||......+...............+...++.+.++|++||+.+|.+||++.++++|+|+.+.
T Consensus 203 lG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~ 277 (297)
T cd06659 203 LGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQT 277 (297)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccC
Confidence 9999999996 77654443333222111111122333456788999999999999999999999999987754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=326.13 Aligned_cols=255 Identities=29% Similarity=0.488 Sum_probs=202.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|.+.+.||.|+||.||+|.++.+|+.||||++............+.+|+.+++.++||||++++++|...
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------- 81 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP------- 81 (328)
T ss_pred ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC-------
Confidence 4789999999999999999999999999999998865443334456788999999999999999999887431
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
....|++|||++++|.+++.. .++++..+..++.||+.||+|||++|
T Consensus 82 --------------------------------~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~ 128 (328)
T cd07856 82 --------------------------------LEDIYFVTELLGTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAG 128 (328)
T ss_pred --------------------------------CCcEEEEeehhccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 235789999999899888764 46888999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+||+++.++.+||+|||++..... ......+++.|+|||++.+...++.++|||
T Consensus 129 iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 190 (328)
T cd07856 129 VVHRDLKPSNILINENCDLKICDFGLARIQDP------------------QMTGYVSTRYYRAPEIMLTWQKYDVEVDIW 190 (328)
T ss_pred cccCCCCHHHEeECCCCCEEeCccccccccCC------------------CcCCCcccccccCceeeeccCCcCcHHHHH
Confidence 99999999999999999999999999874321 112346788999999887645689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHH--------------------------hhhcCCCCC--ccccCCHHHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSD--------------------------LKQKGELPP--SWVAKFSEQESLLRR 668 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~--------------------------l~~~~~~p~--~~~~~~~~l~~LI~~ 668 (1196)
||||++|+|++ ||............ .......|. .....++.+.++|++
T Consensus 191 slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 270 (328)
T cd07856 191 SAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEK 270 (328)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHH
Confidence 99999999997 66433221111000 000001111 112345688999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCc
Q 000993 669 LMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||+.+|.+|||+++++.|+|+...
T Consensus 271 ~l~~~P~~R~t~~ell~~~~~~~~ 294 (328)
T cd07856 271 MLVFDPQKRISAAEALAHPYLAPY 294 (328)
T ss_pred HcCCChhhCCCHHHHhcCCccccc
Confidence 999999999999999999999754
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=318.37 Aligned_cols=250 Identities=26% Similarity=0.363 Sum_probs=194.3
Q ss_pred eeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchh-HHHHHHHH---HHHHhcCCCCeeeeeeeeeecCccccCCCCcC
Q 000993 388 PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV-NDRILREV---ATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 463 (1196)
Q Consensus 388 ~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~-~~~~~~Ev---~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~ 463 (1196)
.||+|+||.||+|.+..+++.||+|++......... ...+..|. ..++...||||+++++++.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------------- 67 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH------------- 67 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeee-------------
Confidence 489999999999999989999999998754322111 12233343 3444568999999987763
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcc
Q 000993 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 542 (1196)
Q Consensus 464 ~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiH 542 (1196)
....+|+||||++ ++|.+++.....+++..++.++.|++.||+|||+++|+|
T Consensus 68 ---------------------------~~~~~~~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H 120 (278)
T cd05606 68 ---------------------------TPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVY 120 (278)
T ss_pred ---------------------------cCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEc
Confidence 2456899999996 589988888888999999999999999999999999999
Q ss_pred cCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHH
Q 000993 543 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622 (1196)
Q Consensus 543 rDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlG 622 (1196)
|||||+||+++.++.+||+|||+++..... ......|+..|+|||++.+...++.++||||+|
T Consensus 121 ~di~p~nili~~~~~~kl~dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G 183 (278)
T cd05606 121 RDLKPANILLDEHGHVRISDLGLACDFSKK-----------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLG 183 (278)
T ss_pred CCCCHHHEEECCCCCEEEccCcCccccCcc-----------------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHH
Confidence 999999999999999999999998753211 112347899999999987644689999999999
Q ss_pred HHHHHhhc---CCchhHH---HHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccCCCC
Q 000993 623 IVFFELWH---PFSTAME---RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQ 691 (1196)
Q Consensus 623 viLyELlt---Pf~~~~~---~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~~~~ 691 (1196)
|++|||++ ||..... ......... ..+..+...++++.+++++||..+|.+|| ++.++++|+||..
T Consensus 184 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~ 260 (278)
T cd05606 184 CMLFKLLRGHSPFRQHKTKDKHEIDRMTLT---MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRS 260 (278)
T ss_pred HHHHHHHhCCCCCCCCCccchHHHHHHhhc---cCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccC
Confidence 99999996 7765421 111111111 11222223467999999999999999999 9999999999998
Q ss_pred chHHHH
Q 000993 692 MEYELL 697 (1196)
Q Consensus 692 ~~~~~~ 697 (1196)
..+...
T Consensus 261 ~~~~~~ 266 (278)
T cd05606 261 LDWQMV 266 (278)
T ss_pred CCchHh
Confidence 775533
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=328.61 Aligned_cols=272 Identities=28% Similarity=0.388 Sum_probs=204.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
..+|.+.+.||.|+||.||+|.++.+|+.||+|++..... .....+.+|+.+++.++||||+++++++...+....
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~-- 79 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLT-- 79 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccc--
Confidence 3689999999999999999999999999999999876543 345678899999999999999999987643211000
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...........+|++|||++++|.+++.. ..+++..++.++.||+.||.|||++|
T Consensus 80 ------------------------~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~g 134 (342)
T cd07854 80 ------------------------EDVGSLTELNSVYIVQEYMETDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSAN 134 (342)
T ss_pred ------------------------cccccccccceEEEEeecccccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 00001123457899999999999888754 46899999999999999999999999
Q ss_pred CcccCCCcCcEEecC-CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 540 IIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 540 IiHrDLKp~NILld~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|+||||||+||+++. ++.+||+|||+++.+...... ........++..|+|||.+.+...++.++||
T Consensus 135 ivH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 202 (342)
T cd07854 135 VLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSH------------KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDM 202 (342)
T ss_pred cccCCCCHHHEEEcCCCceEEECCcccceecCCcccc------------ccccccccccccccCHHHHhCccccCchhhH
Confidence 999999999999985 457899999999754321100 0001223678899999987654568899999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhc----------------------CC---CC--CccccCCHHHHHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK----------------------GE---LP--PSWVAKFSEQESLLRR 668 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~----------------------~~---~p--~~~~~~~~~l~~LI~~ 668 (1196)
|||||++|+|++ ||................ .. .+ ......+.++.+||.+
T Consensus 203 wSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 282 (342)
T cd07854 203 WAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQ 282 (342)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHH
Confidence 999999999996 776544333222211100 00 00 0112345678899999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCc
Q 000993 669 LMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||+.||.+|||+.++++|+||+..
T Consensus 283 ~L~~dP~~R~t~~ell~h~~~~~~ 306 (342)
T cd07854 283 ILTFNPMDRLTAEEALMHPYMSCY 306 (342)
T ss_pred HhCCCchhccCHHHHhCCCccccc
Confidence 999999999999999999999754
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-34 Score=318.44 Aligned_cols=245 Identities=29% Similarity=0.499 Sum_probs=191.5
Q ss_pred eEEeeeccCCcEEEEEEEEc----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 384 EELQPLGHGGFGHVVLCKNK----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 384 ~~~~~LG~G~fG~Vy~a~~~----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++.+.||.|.||.||+|.+. ..+..|+||+++. .......+.+.+|++.+++++||||+++++++..
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~-~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~-------- 72 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKP-SSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIE-------- 72 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEEST-TSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEES--------
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecc-ccccccceeeeecccccccccccccccccccccc--------
Confidence 46789999999999999998 4467899999953 2344457889999999999999999999999853
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+++|||||+ |+|.+++... ..+++.+.+.++.||+.||+|||
T Consensus 73 --------------------------------~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh 120 (259)
T PF07714_consen 73 --------------------------------NEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLH 120 (259)
T ss_dssp --------------------------------SSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 223789999997 6999999876 67999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
+++++|+||+++||+++.++.+||+|||++........ ........+...|+|||.+.+ ..++.++
T Consensus 121 ~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~-------------~~~~~~~~~~~~~~aPE~~~~-~~~~~ks 186 (259)
T PF07714_consen 121 SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK-------------YKNDSSQQLPLRYLAPEVLKD-GEYTKKS 186 (259)
T ss_dssp HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS-------------EEESTTSESGGGGS-HHHHHH-SEESHHH
T ss_pred cccccccccccccccccccccccccccccccccccccc-------------ccccccccccccccccccccc-ccccccc
Confidence 99999999999999999999999999999976521110 011233457789999999987 4589999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
||||||+++|||++ ||......+..... . ....++.....+..+.++|.+||+.||.+|||+.++++
T Consensus 187 DVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 187 DVYSFGMLLYEILTLGKFPFSDYDNEEIIEKL-K-QGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHH-H-TTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred cccccccccccccccccccccccccccccccc-c-ccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 99999999999997 67665444433333 2 33333344456778999999999999999999999986
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=335.89 Aligned_cols=251 Identities=21% Similarity=0.281 Sum_probs=195.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETG 453 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~ 453 (1196)
.++|.+.+.||+|+||.||+|.+... +..||||+++... .....+.+.+|+.+|+.+. |||||+++++|.+
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~-- 112 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA-RSSEKQALMSELKIMTHLGPHLNIVNLLGACTK-- 112 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc--
Confidence 36788999999999999999987533 3479999986433 2334567999999999996 9999999998832
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-------------------
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY------------------- 513 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~------------------- 513 (1196)
...+|+|||||+ |+|.+++...
T Consensus 113 --------------------------------------~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 154 (400)
T cd05105 113 --------------------------------------SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIF 154 (400)
T ss_pred --------------------------------------CCceEEEEEecCCCcHHHHHHHhhhhhhcccccccccccccc
Confidence 345799999996 5898887542
Q ss_pred -----------------------------------------------------------------------------CCC
Q 000993 514 -----------------------------------------------------------------------------DHF 516 (1196)
Q Consensus 514 -----------------------------------------------------------------------------~~l 516 (1196)
..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 234 (400)
T cd05105 155 GINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGL 234 (400)
T ss_pred CCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCC
Confidence 236
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccc
Q 000993 517 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 596 (1196)
Q Consensus 517 ~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 596 (1196)
++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....... ........+
T Consensus 235 ~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~-------------~~~~~~~~~ 301 (400)
T cd05105 235 TTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSN-------------YVSKGSTFL 301 (400)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceecccccc-------------ccccCCcCC
Confidence 7788899999999999999999999999999999999999999999999976432110 011123457
Q ss_pred cccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccC
Q 000993 597 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 672 (1196)
Q Consensus 597 T~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~ 672 (1196)
++.|+|||.+.+ ..++.++|||||||++|||++ ||............+... ..++.....++++.+++.+||+.
T Consensus 302 ~~~y~aPE~~~~-~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~ 379 (400)
T cd05105 302 PVKWMAPESIFD-NLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSG-YRMAKPDHATQEVYDIMVKCWNS 379 (400)
T ss_pred CcceEChhhhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcC-CCCCCCccCCHHHHHHHHHHCcc
Confidence 789999999987 568999999999999999984 665544333333333322 22333345667899999999999
Q ss_pred CCCCCCCHHHHHhc
Q 000993 673 SPSDRPSATELLQD 686 (1196)
Q Consensus 673 dP~~RPta~eiL~~ 686 (1196)
||++||++.++.+.
T Consensus 380 dP~~RPt~~~l~~~ 393 (400)
T cd05105 380 EPEKRPSFLHLSDI 393 (400)
T ss_pred CHhHCcCHHHHHHH
Confidence 99999999998763
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-34 Score=329.11 Aligned_cols=261 Identities=19% Similarity=0.298 Sum_probs=197.6
Q ss_pred eeeccC--CcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHG--GFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G--~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
..||+| +||+||+|++..+|+.||+|++..........+.+.+|+.+++.++||||++++++|..
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~------------- 70 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTT------------- 70 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEec-------------
Confidence 356666 99999999999999999999987655554556788899999999999999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGII 541 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs~gIi 541 (1196)
...+|++|||+. ++|.+++... ..+++..+..++.||+.||+|||++||+
T Consensus 71 ---------------------------~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~iv 123 (328)
T cd08226 71 ---------------------------GSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYI 123 (328)
T ss_pred ---------------------------CCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 346799999997 5899888764 3589999999999999999999999999
Q ss_pred ccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC-CCCCCcchhHH
Q 000993 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYS 620 (1196)
Q Consensus 542 HrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~s~ksDVwS 620 (1196)
||||||+|||++.++.++++||+.+............. ........++..|+|||++.+. ..++.++||||
T Consensus 124 HrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws 195 (328)
T cd08226 124 HRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVV--------YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYS 195 (328)
T ss_pred cCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccc--------ccccccccCccCccChhhhcCCCCCCCchhhHHH
Confidence 99999999999999999999998765432211000000 0001112456789999998763 34789999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC--------------------------------------------CC
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQKGEL--------------------------------------------PP 653 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~--------------------------------------------p~ 653 (1196)
|||++|||++ ||............+...... .+
T Consensus 196 lG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (328)
T cd08226 196 VGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTP 275 (328)
T ss_pred HHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccch
Confidence 9999999996 676544333332222111100 01
Q ss_pred ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchHH
Q 000993 654 SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYE 695 (1196)
Q Consensus 654 ~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~~ 695 (1196)
.....++.+.+||++||+.||.+|||++++++|+||.+....
T Consensus 276 ~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~ 317 (328)
T cd08226 276 SSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQ 317 (328)
T ss_pred hhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHh
Confidence 111234578899999999999999999999999998776544
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=317.85 Aligned_cols=253 Identities=24% Similarity=0.432 Sum_probs=202.5
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|...+.||.|++|.||++.+..+++.+|+|++..... ...+.+.+|+.+++.++||||+++++++..
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~---------- 87 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHPNIVEMYSSYLV---------- 87 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHHcCCCChheEEEEEEc----------
Confidence 44456799999999999999998999999999864332 334568899999999999999999987732
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
....|+++||++ ++|.+++.. .++++..++.++.||+.||+|||++|+
T Consensus 88 ------------------------------~~~~~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i 136 (285)
T cd06648 88 ------------------------------GDELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGV 136 (285)
T ss_pred ------------------------------CCeEEEEEeccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 346799999996 599998877 679999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+||||||+||+++.++.++|+|||++....... .......|++.|+|||.+.+ ..++.++|+||
T Consensus 137 ~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s 200 (285)
T cd06648 137 IHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV---------------PRRKSLVGTPYWMAPEVISR-LPYGTEVDIWS 200 (285)
T ss_pred ecCCCChhhEEEcCCCcEEEcccccchhhccCC---------------cccccccCCccccCHHHhcC-CCCCCcccHHH
Confidence 999999999999999999999999887542110 01123468999999999887 46899999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
|||++|||++ ||..........................+..+.++|.+||+.+|.+||++.++++|+|+.+..
T Consensus 201 lGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 276 (285)
T cd06648 201 LGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAG 276 (285)
T ss_pred HHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCC
Confidence 9999999997 776554433333222211111112223567899999999999999999999999999987643
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=320.04 Aligned_cols=252 Identities=23% Similarity=0.277 Sum_probs=196.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCC----------------cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCee
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDG----------------RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVV 443 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g----------------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV 443 (1196)
.++|++.+.||+|+||.||+|.+..++ ..||+|.+.... .......+.+|+.+++.++||||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA-SDNAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhcCCCCEe
Confidence 368899999999999999999887543 568999887432 234456788999999999999999
Q ss_pred eeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--------
Q 000993 444 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-------- 514 (1196)
Q Consensus 444 ~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-------- 514 (1196)
+++++|.. ...++++|||++ ++|.+++....
T Consensus 83 ~~~~~~~~----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 122 (296)
T cd05051 83 RLLGVCTV----------------------------------------DPPLCMIMEYMENGDLNQFLQKHVAETSGLAC 122 (296)
T ss_pred EEEEEEec----------------------------------------CCCcEEEEecCCCCCHHHHHHhcccccccccc
Confidence 99988732 245799999996 58999987655
Q ss_pred ---CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccC
Q 000993 515 ---HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG 591 (1196)
Q Consensus 515 ---~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (1196)
.+++..++.++.||+.||+|||++||+||||||+||+++.++.++|+|||+++....... ....
T Consensus 123 ~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-------------~~~~ 189 (296)
T cd05051 123 NSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDY-------------YRVQ 189 (296)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCCCceEEccccceeecccCcc-------------eeec
Confidence 689999999999999999999999999999999999999999999999999875432210 0112
Q ss_pred cCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc-----CCchhHHHHHHHHHhhh-----cCCCCCccccCCHH
Q 000993 592 TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH-----PFSTAMERQIVLSDLKQ-----KGELPPSWVAKFSE 661 (1196)
Q Consensus 592 ~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt-----Pf~~~~~~~~~~~~l~~-----~~~~p~~~~~~~~~ 661 (1196)
....+++.|+|||.+.+ ..++.++|||||||++|||++ ||............... .....+.....+.+
T Consensus 190 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (296)
T cd05051 190 GRAPLPIRWMAWESVLL-GKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKD 268 (296)
T ss_pred CcCCCCceecCHHHhhc-CCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHH
Confidence 23456789999999887 568999999999999999985 56544333332222111 01111222334578
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 662 QESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 662 l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+.+++.+||+.||.+|||+.++++.
T Consensus 269 l~~li~~cl~~~p~~Rpt~~el~~~ 293 (296)
T cd05051 269 IYELMLECWRRDEEDRPTFREIHLF 293 (296)
T ss_pred HHHHHHHHhccChhcCCCHHHHHHH
Confidence 9999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=313.87 Aligned_cols=254 Identities=20% Similarity=0.283 Sum_probs=197.8
Q ss_pred ceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
|.+.+.||+|+||.||+|.+..+ +..||+|.++...........+.+|+..++.++||||+++++.+.+...
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~----- 75 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASS----- 75 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCc-----
Confidence 56778999999999999998754 4789999987655555556789999999999999999999988743210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc------CCCCHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY------DHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~------~~l~e~~~~~i~~qIa~gL 532 (1196)
.......+++|||++ ++|..++... ..+++..++.++.||+.||
T Consensus 76 -----------------------------~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL 126 (273)
T cd05035 76 -----------------------------LQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGM 126 (273)
T ss_pred -----------------------------cccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHH
Confidence 012346799999997 5898887432 3589999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||+++++||||||+||++++++.+||+|||+++........ .......++..|+|||.+.+ ..+
T Consensus 127 ~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-------------~~~~~~~~~~~~~~pe~~~~-~~~ 192 (273)
T cd05035 127 EYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYY-------------RQGRIAKMPVKWIAIESLAD-RVY 192 (273)
T ss_pred HHHHhCCeeccccchheEEECCCCeEEECCccceeeccccccc-------------cccccccCCccccCHhhccc-CCC
Confidence 9999999999999999999999999999999999865322110 11122345678999999876 568
Q ss_pred CCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 613 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+.++|||||||++|||++ ||......+.... +. ....+......++.+.+++.+||+.||.+|||+.+++++
T Consensus 193 ~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 193 TSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDY-LR-HGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred CcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HH-cCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999999985 6655444433322 22 222333334567799999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=313.01 Aligned_cols=245 Identities=22% Similarity=0.388 Sum_probs=194.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|.+.+.||+|+||.||+|.+. .+..+|+|.+..... ....+.+|+.+++.++||||+++++++.+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 70 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM---SEDEFIEEAKVMMKLSHEKLVQLYGVCTK--------- 70 (256)
T ss_pred HHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCcc---cHHHHHHHHHHHhcCCCCCeeeEEEEEcc---------
Confidence 57899999999999999999886 455799998864332 24568999999999999999999988732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|++|||+. ++|.+++... ..+++..++.++.||+.||+|||+.
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 119 (256)
T cd05113 71 -------------------------------QRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK 119 (256)
T ss_pred -------------------------------CCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 234699999996 5899988764 4689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|++|+||||+||+++.++.+||+|||.++....... .......++..|+|||.+.+ ..++.++||
T Consensus 120 ~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~--------------~~~~~~~~~~~y~~pe~~~~-~~~~~~~Di 184 (256)
T cd05113 120 QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY--------------TSSVGSKFPVRWSPPEVLLY-SKFSSKSDV 184 (256)
T ss_pred CeeccccCcceEEEcCCCCEEECCCccceecCCCce--------------eecCCCccChhhCCHHHHhc-CcccchhHH
Confidence 999999999999999999999999999875422110 01122346678999999987 568999999
Q ss_pred HHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 619 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 619 wSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||||++|+|++ ||.............. ...++.....+..+.+++.+||+.||.+||++.+++.+
T Consensus 185 ~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 185 WAFGVLMWEVYSLGKMPYERFNNSETVEKVSQ--GLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred HHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 999999999986 6654444333333322 22222223346789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-33 Score=317.40 Aligned_cols=256 Identities=22% Similarity=0.303 Sum_probs=197.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~-----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.++|++.+.||+|+||.||+|.++. .+..||+|.++... .......+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--- 80 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVVRLLGVVSK--- 80 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC---
Confidence 3689999999999999999998752 35589999876432 23334568899999999999999999988632
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------CCCCHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------DHFDKELAWH 523 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------~~l~e~~~~~ 523 (1196)
....|++|||++ |+|.+++... ..++...+..
T Consensus 81 -------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 123 (288)
T cd05061 81 -------------------------------------GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 123 (288)
T ss_pred -------------------------------------CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHH
Confidence 235699999996 6999998653 2346678889
Q ss_pred HHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCc
Q 000993 524 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 603 (1196)
Q Consensus 524 i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 603 (1196)
++.||+.||+|||+++|+||||||+||+++.++.+||+|||+++....... ........++..|+||
T Consensus 124 ~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~~p 190 (288)
T cd05061 124 MAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY-------------YRKGGKGLLPVRWMAP 190 (288)
T ss_pred HHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCcccccccccc-------------ccccCCCcccccccCH
Confidence 999999999999999999999999999999999999999999986432110 0111223467789999
Q ss_pred hhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC
Q 000993 604 EIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 679 (1196)
Q Consensus 604 E~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt 679 (1196)
|.+.+ ..++.++|+|||||++|||++ ||............. ....++.....++.+.+++.+||+.||.+|||
T Consensus 191 E~~~~-~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 267 (288)
T cd05061 191 ESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM--DGGYLDQPDNCPERVTDLMRMCWQFNPKMRPT 267 (288)
T ss_pred HHhcc-CCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHcCCChhHCcC
Confidence 99887 568999999999999999985 776554444332222 22222223344678999999999999999999
Q ss_pred HHHHHh------ccCCCCc
Q 000993 680 ATELLQ------DALPPQM 692 (1196)
Q Consensus 680 a~eiL~------~~~~~~~ 692 (1196)
+.++++ |++|...
T Consensus 268 ~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 268 FLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred HHHHHHHHHhhcCCCCCCC
Confidence 999986 5555543
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=310.38 Aligned_cols=271 Identities=27% Similarity=0.446 Sum_probs=217.5
Q ss_pred CCCcccCCceE-EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeec
Q 000993 375 PSSRYLNDFEE-LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFET 452 (1196)
Q Consensus 375 ~~~~~~~~y~~-~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~ 452 (1196)
..++|.+-|.+ .+.||+|+|+.|--|....+|..||||+|.+.. .....++.||++++.++ .|+||+++++.|
T Consensus 71 ~~g~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~--gHsR~RvfREVe~f~~Cqgh~nilqLiefF--- 145 (463)
T KOG0607|consen 71 LSGKFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP--GHSRSRVFREVETFYQCQGHKNILQLIEFF--- 145 (463)
T ss_pred ccchHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCC--chHHHHHHHHHHHHHHhcCCccHHHHHHHh---
Confidence 34555555555 357999999999999999999999999997542 23456899999999999 599999999776
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~g 531 (1196)
++...+|+|||-|. |+|...|+++..|++.++.++..+|+.|
T Consensus 146 -------------------------------------Edd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~a 188 (463)
T KOG0607|consen 146 -------------------------------------EDDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASA 188 (463)
T ss_pred -------------------------------------cccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHH
Confidence 34678999999995 6999999999999999999999999999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCCCC---eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc-
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ- 607 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~~~---vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~- 607 (1196)
|.|||.+||.||||||+|||-....+ +|||||.+..-+.....-. + ....+..+.+|+..|||||+..
T Consensus 189 LdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~s----p----astP~L~tPvGSAEfMAPEVVd~ 260 (463)
T KOG0607|consen 189 LDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCS----P----ASTPELLTPVGSAEFMAPEVVDV 260 (463)
T ss_pred HHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCC----C----CCCccccCcccchhhcchhHHhh
Confidence 99999999999999999999876544 8999999987543222111 1 1122345679999999999853
Q ss_pred --C-CCCCCCcchhHHHHHHHHHhhc---CCchhH---------------HHHHHHHHhhhcCCCCC-ccccCCHHHHHH
Q 000993 608 --G-WPKIDEKADMYSLGIVFFELWH---PFSTAM---------------ERQIVLSDLKQKGELPP-SWVAKFSEQESL 665 (1196)
Q Consensus 608 --~-~~~~s~ksDVwSlGviLyELlt---Pf~~~~---------------~~~~~~~~l~~~~~~p~-~~~~~~~~l~~L 665 (1196)
+ ...|+.++|.||||||||-|++ ||.+.- ....+..+...+..+|. .|..++.++++|
T Consensus 261 fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdl 340 (463)
T KOG0607|consen 261 FVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDL 340 (463)
T ss_pred hccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHH
Confidence 2 2358999999999999999996 664321 12233344445566775 888999999999
Q ss_pred HHHcccCCCCCCCCHHHHHhccCCCCchHH
Q 000993 666 LRRLMSPSPSDRPSATELLQDALPPQMEYE 695 (1196)
Q Consensus 666 I~~cL~~dP~~RPta~eiL~~~~~~~~~~~ 695 (1196)
|+.+|..|+.+|.++.++++|||++....+
T Consensus 341 isnLlvrda~~rlsa~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 341 ISNLLVRDAKQRLSAAQVLNHPWVQRCAPE 370 (463)
T ss_pred HHHHHhccHHhhhhhhhccCCccccccchh
Confidence 999999999999999999999999876543
|
|
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=365.46 Aligned_cols=253 Identities=31% Similarity=0.450 Sum_probs=211.4
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCC
Q 000993 386 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 465 (1196)
Q Consensus 386 ~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 465 (1196)
..+||.|.||.||-|.+..+|...|+|-|+...........+.+|+.+|..++|||+|+|||+=++
T Consensus 1240 g~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvH-------------- 1305 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVH-------------- 1305 (1509)
T ss_pred ccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeec--------------
Confidence 357999999999999999999999999998776656666788999999999999999999987432
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccC
Q 000993 466 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544 (1196)
Q Consensus 466 g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrD 544 (1196)
...++|.||||. |+|.+++...+-.++.....|..|++.|++|||.+||||||
T Consensus 1306 --------------------------Rekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRD 1359 (1509)
T KOG4645|consen 1306 --------------------------REKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRD 1359 (1509)
T ss_pred --------------------------HHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecC
Confidence 355789999996 69999998888888888999999999999999999999999
Q ss_pred CCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC--CCCCcchhHHHH
Q 000993 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP--KIDEKADMYSLG 622 (1196)
Q Consensus 545 LKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~~s~ksDVwSlG 622 (1196)
|||.||+++.+|.+|++|||.|..+..+..+ +.-.....+|||.|||||++.+.. ....++||||||
T Consensus 1360 IK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~-----------~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslG 1428 (1509)
T KOG4645|consen 1360 IKPANILLDFNGLIKYGDFGSAVKIKNNAQT-----------MPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLG 1428 (1509)
T ss_pred CCccceeeecCCcEEeecccceeEecCchhc-----------CCHHHHhhcCCchhcCchhhcccccCCCCcchhhhccc
Confidence 9999999999999999999999987654211 111234679999999999998732 256799999999
Q ss_pred HHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 623 IVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 623 viLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
|++.||+| ||...+..-..+..+. -+..|+.+...+++-+++|.+||..||.+|+++.|++.|.|-+
T Consensus 1429 CVVlEM~tGkrPW~~~dne~aIMy~V~-~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~ 1498 (1509)
T KOG4645|consen 1429 CVVLEMATGKRPWAELDNEWAIMYHVA-AGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGK 1498 (1509)
T ss_pred ceEEEeecCCCchhhccchhHHHhHHh-ccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccc
Confidence 99999998 8877665544444433 3445555555788999999999999999999999999997654
|
|
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=316.73 Aligned_cols=255 Identities=29% Similarity=0.444 Sum_probs=198.3
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc---CCCCeeeeeeeeeecCccccCC
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL---QHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L---~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
|++.+.||.|+||.||+|+++.+++.||+|.++...........+.+|+.+++.+ +||||+++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~----- 75 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRT----- 75 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccC-----
Confidence 6788999999999999999998899999999976544333345566788777666 69999999999854210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
.....+|++|||++++|.+++.... .+++..++.++.||+.||+|||+
T Consensus 76 ------------------------------~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~ 125 (287)
T cd07838 76 ------------------------------DRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHS 125 (287)
T ss_pred ------------------------------CCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1123589999999999999887643 58999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
++++|+||||+||+++.++.+||+|||++..+.... ......+++.|+|||++.+ ..++.++|
T Consensus 126 ~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~----------------~~~~~~~~~~~~~PE~~~~-~~~~~~~D 188 (287)
T cd07838 126 HRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEM----------------ALTSVVVTLWYRAPEVLLQ-SSYATPVD 188 (287)
T ss_pred CCeeeccCChhhEEEccCCCEEEeccCcceeccCCc----------------ccccccccccccChHHhcc-CCCCCcch
Confidence 999999999999999999999999999987653211 0122357889999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcC----------------CCCC--------ccccCCHHHHHHHHHcc
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG----------------ELPP--------SWVAKFSEQESLLRRLM 670 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~----------------~~p~--------~~~~~~~~l~~LI~~cL 670 (1196)
+|||||++|||++ ||......+.......... ..+. .....++.+.++|.+||
T Consensus 189 i~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 268 (287)
T cd07838 189 MWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKML 268 (287)
T ss_pred hhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHh
Confidence 9999999999996 6655444333222211100 0000 01123456789999999
Q ss_pred cCCCCCCCCHHHHHhccCC
Q 000993 671 SPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~~~~ 689 (1196)
+.||.+||++.++++|+||
T Consensus 269 ~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 269 TFNPHKRISAFEALQHPYF 287 (287)
T ss_pred ccCCccCCCHHHHhcCcCC
Confidence 9999999999999999996
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=314.44 Aligned_cols=250 Identities=21% Similarity=0.279 Sum_probs=197.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.++|.+.+.||+|+||.||+|.++.. +..||+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--- 80 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVST--- 80 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC---
Confidence 46899999999999999999998744 3789999976432 22344578899999999999999999988732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------CCCCHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------DHFDKELAWH 523 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------~~l~e~~~~~ 523 (1196)
....|++|||++ ++|.+++... ..+++..++.
T Consensus 81 -------------------------------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 123 (277)
T cd05032 81 -------------------------------------GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQ 123 (277)
T ss_pred -------------------------------------CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHH
Confidence 345799999996 6999988643 2367889999
Q ss_pred HHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCc
Q 000993 524 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 603 (1196)
Q Consensus 524 i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 603 (1196)
++.||+.||.|||+++++||||||+|||++.++.+||+|||+++........ .......+|..|+||
T Consensus 124 ~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aP 190 (277)
T cd05032 124 MAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYY-------------RKGGKGLLPVRWMAP 190 (277)
T ss_pred HHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcccchhhccCccc-------------ccCCCCCccccccCH
Confidence 9999999999999999999999999999999999999999999865322110 111234567899999
Q ss_pred hhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC
Q 000993 604 EIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 679 (1196)
Q Consensus 604 E~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt 679 (1196)
|.+.+ ..++.++|||||||++|||++ ||......+... ... ....++.....+.++.++|.+||+.+|++|||
T Consensus 191 E~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt 267 (277)
T cd05032 191 ESLKD-GVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLK-FVI-DGGHLDLPENCPDKLLELMRMCWQYNPKMRPT 267 (277)
T ss_pred HHHhc-CCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHH-HHh-cCCCCCCCCCCCHHHHHHHHHHcCCChhhCCC
Confidence 99876 568999999999999999986 665544443332 222 22233333345678999999999999999999
Q ss_pred HHHHHhc
Q 000993 680 ATELLQD 686 (1196)
Q Consensus 680 a~eiL~~ 686 (1196)
+.++++.
T Consensus 268 ~~~l~~~ 274 (277)
T cd05032 268 FLEIVSS 274 (277)
T ss_pred HHHHHHH
Confidence 9999863
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-34 Score=353.38 Aligned_cols=248 Identities=22% Similarity=0.350 Sum_probs=203.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC-C----cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLD-G----RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~-g----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
...++.+.||+|+||.||.|....- | ..||||.++ +..+.....+|++|..+|+.++|||||+++|++++.
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~-~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~--- 767 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLK-RLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS--- 767 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEecc-ccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC---
Confidence 4567789999999999999998643 2 248888876 334556778999999999999999999999999653
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-------CCCCHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------DHFDKELAWHLFRQ 527 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------~~l~e~~~~~i~~q 527 (1196)
...+|++|||. |+|..+|++. ..++......++.|
T Consensus 768 -------------------------------------~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~d 810 (1025)
T KOG1095|consen 768 -------------------------------------GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALD 810 (1025)
T ss_pred -------------------------------------CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHH
Confidence 23589999995 6999999865 24888899999999
Q ss_pred HHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 528 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 528 Ia~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
||+|+.|||++++|||||..+|+||+....+||+|||+|+.+...+..+. .....-...|||||.++
T Consensus 811 vA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~-------------~~~a~lPvkWm~PEsl~ 877 (1025)
T KOG1095|consen 811 VAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRK-------------HGEAMLPVKWMPPESLK 877 (1025)
T ss_pred HhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhhhhchheec-------------cCccccceecCCHHHHh
Confidence 99999999999999999999999999999999999999996543332211 11123456899999999
Q ss_pred CCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHH
Q 000993 608 GWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 683 (1196)
Q Consensus 608 ~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ei 683 (1196)
. ..++.|+|||||||+|||++| ||....+.++....+.. ++++ .+..++..+.++|..||+.+|++||++..|
T Consensus 878 d-~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~g-gRL~-~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i 954 (1025)
T KOG1095|consen 878 D-GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEG-GRLD-PPSYCPEKLYQLMLQCWKHDPEDRPSFRTI 954 (1025)
T ss_pred h-cccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhC-CccC-CCCCCChHHHHHHHHHccCChhhCccHHHH
Confidence 7 679999999999999999996 88888877776655543 3433 334566789999999999999999999999
Q ss_pred Hh
Q 000993 684 LQ 685 (1196)
Q Consensus 684 L~ 685 (1196)
+.
T Consensus 955 ~~ 956 (1025)
T KOG1095|consen 955 VE 956 (1025)
T ss_pred Hh
Confidence 97
|
|
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=312.60 Aligned_cols=249 Identities=22% Similarity=0.318 Sum_probs=198.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
++|++.+.||+|+||.||+|.++.+ ...||||+++... .......+.+|+.+++.++||||+++++.+.+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 76 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTK------ 76 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEec------
Confidence 6799999999999999999998754 4579999886432 33345678899999999999999999987632
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|++|||++ ++|.+++... ..+++..++.++.|++.||+||
T Consensus 77 ----------------------------------~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L 122 (266)
T cd05033 77 ----------------------------------SRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYL 122 (266)
T ss_pred ----------------------------------CCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 345799999997 5999998764 4689999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|+++|+||||||+|||++.++.+||+|||+++....... ........+++.|+|||.+.+ ..++.+
T Consensus 123 h~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~~Pe~~~~-~~~~~~ 188 (266)
T cd05033 123 SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEA-------------TYTTKGGKIPIRWTAPEAIAY-RKFTSA 188 (266)
T ss_pred HhCCcccCCCCcceEEEcCCCCEEECccchhhccccccc-------------ceeccCCCCCccccChhhhcc-CCCccc
Confidence 999999999999999999999999999999987531110 001112345678999999887 568999
Q ss_pred chhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 616 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+||||||+++|+|++ ||............ . ....++.....+..+.+++.+||+.+|++||++.+++++
T Consensus 189 ~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 189 SDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAV-E-DGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred cchHHHHHHHHHHHccCCCCCCCCCHHHHHHHH-H-cCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 999999999999985 77655444333222 2 222223334567789999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=333.34 Aligned_cols=263 Identities=27% Similarity=0.432 Sum_probs=225.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
-+.+++.+..||-|+||.|-++........+|+|++++... .....+.+..|-.+|..++.|.||++|..|
T Consensus 418 ~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTf-------- 489 (732)
T KOG0614|consen 418 KLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTF-------- 489 (732)
T ss_pred chhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHh--------
Confidence 35788889999999999999998875555699999987653 444567899999999999999999999776
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeec-CCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~-~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
.+..++|+.||-| +|.|+..++.++.|++..++.++..+++|++|||
T Consensus 490 --------------------------------rd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH 537 (732)
T KOG0614|consen 490 --------------------------------RDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLH 537 (732)
T ss_pred --------------------------------ccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHH
Confidence 3467899999999 6799999999999999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++|||+|||||+|+|++.+|.+||.|||+|+.+.... .+-++||||.|.|||++.. ...+.++
T Consensus 538 ~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~----------------KTwTFcGTpEYVAPEIILn-KGHD~av 600 (732)
T KOG0614|consen 538 RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR----------------KTWTFCGTPEYVAPEIILN-KGHDRAV 600 (732)
T ss_pred hcCceeccCChhheeeccCCceEEeehhhHHHhccCC----------------ceeeecCCcccccchhhhc-cCcchhh
Confidence 9999999999999999999999999999999876443 2346899999999999988 4579999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhccC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDAL 688 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~~~ 688 (1196)
|.|||||++|||++ ||...+++.....++..-..+ ..+..+...+.+||+++...+|.+|.. +.+|-+|.|
T Consensus 601 DyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i-~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~W 679 (732)
T KOG0614|consen 601 DYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI-EFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRW 679 (732)
T ss_pred HHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh-hcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhh
Confidence 99999999999996 999998888777666543222 111344557899999999999999985 899999999
Q ss_pred CCCchHHHHHH
Q 000993 689 PPQMEYELLDN 699 (1196)
Q Consensus 689 ~~~~~~~~~~~ 699 (1196)
|.+..|+-+..
T Consensus 680 f~gfdweglr~ 690 (732)
T KOG0614|consen 680 FEGFDWEGLRS 690 (732)
T ss_pred hhcCChhhhhh
Confidence 99999886643
|
|
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-33 Score=307.84 Aligned_cols=250 Identities=29% Similarity=0.461 Sum_probs=208.2
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||+|++|.||++.+..+++.||+|.+............+.+|+++++.++|||++++++++..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---------- 70 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIET---------- 70 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEe----------
Confidence 5788999999999999999999899999999997665444556789999999999999999999987632
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
....|++|||+++ +|.+++.....+++..++.++.|++.||.|||++||
T Consensus 71 ------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i 120 (254)
T cd06627 71 ------------------------------SDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGV 120 (254)
T ss_pred ------------------------------CCEEEEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCc
Confidence 3467999999975 999999888889999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+||||||+||+++.++.++|+|||++........ ......++..|+|||.+.+ ..++.++||||
T Consensus 121 ~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---------------~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~~ 184 (254)
T cd06627 121 IHRDIKAANILTTKDGVVKLADFGVATKLNDVSK---------------DDASVVGTPYWMAPEVIEM-SGASTASDIWS 184 (254)
T ss_pred ccCCCCHHHEEECCCCCEEEeccccceecCCCcc---------------cccccccchhhcCHhhhcC-CCCCcchhHHH
Confidence 9999999999999999999999999986532210 0123468899999999887 44889999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
||+++|+|++ ||............. ....+......++.+.+++.+||..+|++|||+.+++.|+||
T Consensus 185 lG~~l~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 185 LGCTVIELLTGNPPYYDLNPMAALFRIV--QDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred HHHHHHHHHhCCCCCCCccHHHHHHHHh--ccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 9999999996 776555444333332 222333334556789999999999999999999999999986
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=312.35 Aligned_cols=245 Identities=24% Similarity=0.336 Sum_probs=195.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|+++++||+|+||.||+|.+. ++..||+|.+.... ...+.+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 72 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT---MSVQAFLEEANLMKTLQHDKLVRLYAVVTK-------- 72 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc---hhHHHHHHHHHHHHhCCCCCeeeEEEEEcC--------
Confidence 478999999999999999999975 66789999876432 235678999999999999999999977622
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|++|||++ ++|.+++... ..++...++.++.||+.||+|||
T Consensus 73 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH 120 (261)
T cd05072 73 --------------------------------EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE 120 (261)
T ss_pred --------------------------------CCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345799999996 5999988653 46888999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
+++++||||||+||+++.++.+||+|||+++....... .......++..|+|||++.+ ..++.++
T Consensus 121 ~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 185 (261)
T cd05072 121 RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY--------------TAREGAKFPIKWTAPEAINF-GSFTIKS 185 (261)
T ss_pred HCCeeccccchhhEEecCCCcEEECCCccceecCCCce--------------eccCCCccceecCCHHHhcc-CCCChhh
Confidence 99999999999999999999999999999976432110 01122346778999999887 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
|||||||++|+|++ ||............ ... ...+.....+.++.+++.+||..+|++||+++++++
T Consensus 186 Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 186 DVWSFGILLYEIVTYGKIPYPGMSNSDVMSAL-QRG-YRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred hhhhhHHHHHHHHccCCCCCCCCCHHHHHHHH-HcC-CCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 99999999999996 67554443333222 212 222333456678999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-34 Score=321.11 Aligned_cols=252 Identities=28% Similarity=0.439 Sum_probs=201.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
+.|+..+.||.|+||.||+|.+..++..||+|.+..... ......+.+|+.+++.++||||+++++++..
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 73 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYITRYYGSYLK--------- 73 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc-hHHHHHHHHHHHHHHcCCCCccHhhhccccc---------
Confidence 346677889999999999999998999999999874432 2345678999999999999999999987632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+|+||||+++ +|.+++.. ..+++..++.++.||+.||.|||++|
T Consensus 74 -------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ 121 (277)
T cd06642 74 -------------------------------GTKLWIIMEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSER 121 (277)
T ss_pred -------------------------------CCceEEEEEccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 3467999999975 88887754 56899999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
++|+||+|+||+++.++.++|+|||++..+.... .......|+..|+|||++.+ ..++.++|+|
T Consensus 122 ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~ 185 (277)
T cd06642 122 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ---------------IKRNTFVGTPFWMAPEVIKQ-SAYDFKADIW 185 (277)
T ss_pred eeccCCChheEEEeCCCCEEEccccccccccCcc---------------hhhhcccCcccccCHHHhCc-CCCchhhhHH
Confidence 9999999999999999999999999997643211 01123468899999999987 5688999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||||++|||++ ||............ . ....+......+.++.++|.+||+.+|.+||++.++++|+|+...
T Consensus 186 slG~il~el~tg~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06642 186 SLGITAIELAKGEPPNSDLHPMRVLFLI-P-KNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRY 259 (277)
T ss_pred HHHHHHHHHHhCCCCCcccchhhHHhhh-h-cCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHH
Confidence 99999999997 55443333222211 1 112222222345688999999999999999999999999987654
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=316.50 Aligned_cols=248 Identities=20% Similarity=0.277 Sum_probs=194.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcE----EEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRH----YAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~----vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
++|++.+.||+|+||+||+|.+..+++. +++|.+... .......++..|+..++.++||||+++++++.
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~------ 79 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR-SGRQTFQEITDHMLAMGSLDHAYIVRLLGICP------ 79 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc-cchHHHHHHHHHHHHHhcCCCCCcceEEEEEC------
Confidence 6889999999999999999999877764 677766422 22233467888899999999999999998762
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+++|||++ |+|.+++.. ...+++..++.++.||+.||+|
T Consensus 80 -----------------------------------~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~ 124 (279)
T cd05111 80 -----------------------------------GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYY 124 (279)
T ss_pred -----------------------------------CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHH
Confidence 123578999996 699999975 4568999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++|++||||||+|||++.++.+||+|||+++....... ........++..|+|||.+.+ ..++.
T Consensus 125 lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~~pE~~~~-~~~~~ 190 (279)
T cd05111 125 LEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDK-------------KYFYSEHKTPIKWMALESILF-GRYTH 190 (279)
T ss_pred HHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCc-------------ccccCCCCCcccccCHHHhcc-CCcCc
Confidence 9999999999999999999999999999999976432110 011223457788999999987 56899
Q ss_pred cchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 615 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 615 ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++|||||||++|||++ ||........ ...+ ..+..++.......++.+++.+||..||.+|||+.++++.
T Consensus 191 ~~Dv~slG~il~el~t~g~~p~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~ 264 (279)
T cd05111 191 QSDVWSYGVTVWEMMSYGAEPYAGMRPHEV-PDLL-EKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANE 264 (279)
T ss_pred hhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHH-HCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 9999999999999986 7765443332 2222 2334333333456688999999999999999999999763
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=314.00 Aligned_cols=248 Identities=27% Similarity=0.434 Sum_probs=196.4
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHH-HHhcCCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVAT-LSRLQHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~i-L~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||.|+||.||+|.+..+|+.||+|+++..... ......+..|..+ ....+||||++++++|.+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~------------- 68 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQS------------- 68 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEc-------------
Confidence 5689999999999999999999999998644321 1222334455444 445589999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...+|++|||++ ++|.+++.....+++..+..++.||+.||.|||+.+++||
T Consensus 69 ---------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~ 121 (260)
T cd05611 69 ---------------------------KDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHR 121 (260)
T ss_pred ---------------------------CCeEEEEEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 356899999996 5999999888889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||+|+||+++.++.+||+|||+++.... .....|++.|+|||.+.+ ..++.++||||||+
T Consensus 122 dl~p~nil~~~~~~~~l~dfg~~~~~~~-------------------~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~ 181 (260)
T cd05611 122 DIKPENLLIDQTGHLKLTDFGLSRNGLE-------------------NKKFVGTPDYLAPETILG-VGDDKMSDWWSLGC 181 (260)
T ss_pred CCCHHHeEECCCCcEEEeecccceeccc-------------------cccCCCCcCccChhhhcC-CCCcchhhhHHHHH
Confidence 9999999999999999999999875321 123468889999999987 45899999999999
Q ss_pred HHHHhhc---CCchhHHHHHHHHHhhhcCCCCCc-cccCCHHHHHHHHHcccCCCCCCCC---HHHHHhccCCCCchH
Q 000993 624 VFFELWH---PFSTAMERQIVLSDLKQKGELPPS-WVAKFSEQESLLRRLMSPSPSDRPS---ATELLQDALPPQMEY 694 (1196)
Q Consensus 624 iLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~-~~~~~~~l~~LI~~cL~~dP~~RPt---a~eiL~~~~~~~~~~ 694 (1196)
++|+|++ ||...................+.. ....++++.++|.+||+.||++||+ +++++.|+|+...++
T Consensus 182 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~~ 259 (260)
T cd05611 182 VIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSINW 259 (260)
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCCC
Confidence 9999996 776655544433332222222322 2245678999999999999999994 579999999987654
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=320.82 Aligned_cols=247 Identities=24% Similarity=0.361 Sum_probs=193.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcE--EEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRH--YAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~--vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~ 456 (1196)
.++|++.+.||+|+||.||+|.++.++.. +|+|.++. .........+.+|+.++.++ +||||+++++++.+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~-~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~----- 79 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH----- 79 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecc-cCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECC-----
Confidence 47899999999999999999999878765 46666542 22334456788999999999 89999999988732
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----------------CCCHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HFDKE 519 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l~e~ 519 (1196)
...+|++|||++ ++|.+++.... .+++.
T Consensus 80 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 124 (303)
T cd05088 80 -----------------------------------RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 124 (303)
T ss_pred -----------------------------------CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHH
Confidence 345799999996 59999986542 47899
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcccccc
Q 000993 520 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 599 (1196)
Q Consensus 520 ~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 599 (1196)
.++.++.||+.||+|||++|++||||||+|||++.++.+||+|||+++..... .......++..
T Consensus 125 ~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~----------------~~~~~~~~~~~ 188 (303)
T cd05088 125 QLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY----------------VKKTMGRLPVR 188 (303)
T ss_pred HHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcccchh----------------hhcccCCCccc
Confidence 99999999999999999999999999999999999999999999998632100 01112234678
Q ss_pred CCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCC
Q 000993 600 YTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 675 (1196)
Q Consensus 600 Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~ 675 (1196)
|+|||++.+ ..++.++|||||||++|||++ ||......+.... .. ....+......++++.+||.+||+.+|.
T Consensus 189 y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 265 (303)
T cd05088 189 WMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK-LP-QGYRLEKPLNCDDEVYDLMRQCWREKPY 265 (303)
T ss_pred ccCHHHHhc-cCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHH-Hh-cCCcCCCCCCCCHHHHHHHHHHcCCChh
Confidence 999999877 458999999999999999985 6754443333222 21 1112223334567899999999999999
Q ss_pred CCCCHHHHHhc
Q 000993 676 DRPSATELLQD 686 (1196)
Q Consensus 676 ~RPta~eiL~~ 686 (1196)
+||++.+++++
T Consensus 266 ~Rp~~~~il~~ 276 (303)
T cd05088 266 ERPSFAQILVS 276 (303)
T ss_pred hCcCHHHHHHH
Confidence 99999999976
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=314.74 Aligned_cols=265 Identities=28% Similarity=0.436 Sum_probs=208.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCccccC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~~ 458 (1196)
++|.+.+.||.|+||.||+|.+..+|+.||+|++..... .......+.+|+.+++.++ ||||+++++++.
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~-------- 72 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQ-------- 72 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhc--------
Confidence 479999999999999999999999999999999875332 2334567889999999998 999999987762
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeec-CCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~-~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....+|++|||+ +++|.+++.....+++..++.++.|++.||+|||+
T Consensus 73 --------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~ 120 (280)
T cd05581 73 --------------------------------DEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHS 120 (280)
T ss_pred --------------------------------CCceEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 234679999999 56999999988889999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCC-----CCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAF-----PTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|++|+||||+||+++.++.++|+|||++.............. ...............++..|+|||++.+ ..+
T Consensus 121 ~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~ 199 (280)
T cd05581 121 KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE-KPA 199 (280)
T ss_pred CCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCC-CCC
Confidence 9999999999999999999999999999986643321110000 0000000112234568899999999887 458
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH----HHHHh
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQ 685 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta----~eiL~ 685 (1196)
+.++|+||||+++|++++ ||...................|. ..++.+.++|.+||+.+|.+||++ .++++
T Consensus 200 ~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 200 GKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYSFPP---NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred ChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCCCCCC---ccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 899999999999999996 77655543333333322333333 335689999999999999999999 99999
Q ss_pred ccCC
Q 000993 686 DALP 689 (1196)
Q Consensus 686 ~~~~ 689 (1196)
|+||
T Consensus 277 ~~~~ 280 (280)
T cd05581 277 HPFF 280 (280)
T ss_pred CCCC
Confidence 9997
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=319.47 Aligned_cols=251 Identities=22% Similarity=0.295 Sum_probs=193.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCC--------------cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeee
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDG--------------RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 446 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g--------------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~ 446 (1196)
++|++.+.||+|+||.||+|++..++ ..||+|+++.. ........+.+|+++++.++||||++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRAD-VTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 58999999999999999999876432 35899988643 3334456799999999999999999999
Q ss_pred eeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-----------
Q 000993 447 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------- 514 (1196)
Q Consensus 447 ~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------- 514 (1196)
+++.. ...+|+|||||+ ++|.+++....
T Consensus 84 ~~~~~----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 123 (295)
T cd05097 84 GVCVS----------------------------------------DDPLCMITEYMENGDLNQFLSQREIESTFTHANNI 123 (295)
T ss_pred EEEcC----------------------------------------CCccEEEEecCCCCcHHHHHHhccccccccccccC
Confidence 88732 345699999997 59999886432
Q ss_pred -CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcC
Q 000993 515 -HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTG 593 (1196)
Q Consensus 515 -~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (1196)
.+++..++.++.||+.||+|||++|++||||||+||+++.++.+||+|||+++....... ......
T Consensus 124 ~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~ 190 (295)
T cd05097 124 PSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDY-------------YRIQGR 190 (295)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcEEecccccccccccCcc-------------eeccCc
Confidence 367888999999999999999999999999999999999999999999999975421110 011123
Q ss_pred ccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc-----CCchhHHHHHHHHHh---hh--cCCCCCccccCCHHHH
Q 000993 594 QVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH-----PFSTAMERQIVLSDL---KQ--KGELPPSWVAKFSEQE 663 (1196)
Q Consensus 594 ~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt-----Pf~~~~~~~~~~~~l---~~--~~~~p~~~~~~~~~l~ 663 (1196)
..+++.|+|||++.+ ..++.++|||||||++|+|++ ||......+...... .. ...........++.+.
T Consensus 191 ~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 269 (295)
T cd05097 191 AVLPIRWMAWESILL-GKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVF 269 (295)
T ss_pred CcCceeecChhhhcc-CCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHH
Confidence 356789999999887 568999999999999999985 776544433322211 11 1111222234567899
Q ss_pred HHHHHcccCCCCCCCCHHHHHhc
Q 000993 664 SLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 664 ~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|+.+||+.||.+||++++|++.
T Consensus 270 ~li~~~l~~~p~~RPs~~~i~~~ 292 (295)
T cd05097 270 KLMMRCWSRDIKDRPTFNKIHHF 292 (295)
T ss_pred HHHHHHcCCCchhCcCHHHHHHH
Confidence 99999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-33 Score=311.46 Aligned_cols=245 Identities=24% Similarity=0.404 Sum_probs=194.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.+|++.+.||+|+||.||+|.++ ++..+|+|++..... ....+.+|+.+++.++||||+++++++.+
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------- 70 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM---SEDDFIEEAKVMMKLSHPNLVQLYGVCTK--------- 70 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC---CHHHHHHHHHHHHhCCCCCEEEEEEEEcC---------
Confidence 47889999999999999999987 567899998864332 23568889999999999999999987632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....|++|||++ ++|.+++... ..+++..++.++.||+.||+|||++
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 119 (256)
T cd05059 71 -------------------------------QRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESN 119 (256)
T ss_pred -------------------------------CCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 345799999996 5899998753 4689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|++||||||+||+++.++.+||+|||+++....... .......++..|+|||.+.+ ..++.++||
T Consensus 120 ~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Di 184 (256)
T cd05059 120 GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY--------------TSSQGTKFPVKWAPPEVFDY-SRFSSKSDV 184 (256)
T ss_pred CcccccccHhhEEECCCCcEEECCcccceecccccc--------------cccCCCCCCccccCHHHhcc-CCCCchhhH
Confidence 999999999999999999999999999875432110 00112234568999999987 568999999
Q ss_pred HHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 619 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 619 wSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||||++|||++ ||......+..... . ....++.....++++.+++.+||+.+|.+|||+.++++.
T Consensus 185 ~slG~il~~l~~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 185 WSFGVLMWEVFSEGKMPYERFSNSEVVESV-S-AGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHHH-H-cCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 999999999986 66554444333222 2 122222333467789999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=318.76 Aligned_cols=250 Identities=20% Similarity=0.282 Sum_probs=196.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
+.+|++.+.||+|+||.||+|.+..+ ++.||||+++... .......+.+|+.+++.++||||+++++.+.+
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~--- 79 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTK--- 79 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC---
Confidence 35688889999999999999988643 5789999987432 23345678899999999999999999988732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------------CCCC
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DHFD 517 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~l~ 517 (1196)
...+++++||++ ++|.+++... ..++
T Consensus 80 -------------------------------------~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 122 (283)
T cd05091 80 -------------------------------------EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLE 122 (283)
T ss_pred -------------------------------------CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccC
Confidence 345789999997 5888887532 2478
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcccc
Q 000993 518 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 597 (1196)
Q Consensus 518 e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT 597 (1196)
+..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||+++........ .......++
T Consensus 123 ~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------~~~~~~~~~ 189 (283)
T cd05091 123 PADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYY-------------KLMGNSLLP 189 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEecccccccccccchhe-------------eeccCccCC
Confidence 8889999999999999999999999999999999999999999999998864322100 011233567
Q ss_pred ccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCC
Q 000993 598 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 673 (1196)
Q Consensus 598 ~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~d 673 (1196)
+.|+|||++.+ ..++.++|||||||++|||++ ||......+...... ....++.....++.+.+|+.+||+.+
T Consensus 190 ~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~~li~~cl~~~ 266 (283)
T cd05091 190 IRWMSPEAIMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIR--NRQVLPCPDDCPAWVYTLMLECWNEF 266 (283)
T ss_pred ccccCHHHHhc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH--cCCcCCCCCCCCHHHHHHHHHHhCCC
Confidence 89999999876 568999999999999999986 666655544433322 22223333456678999999999999
Q ss_pred CCCCCCHHHHHhc
Q 000993 674 PSDRPSATELLQD 686 (1196)
Q Consensus 674 P~~RPta~eiL~~ 686 (1196)
|.+||++.+|++.
T Consensus 267 p~~RP~~~~i~~~ 279 (283)
T cd05091 267 PSRRPRFKDIHSR 279 (283)
T ss_pred cccCCCHHHHHHH
Confidence 9999999999874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=316.14 Aligned_cols=246 Identities=21% Similarity=0.353 Sum_probs=193.7
Q ss_pred ccCCceEEeee--ccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCcc
Q 000993 379 YLNDFEELQPL--GHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 379 ~~~~y~~~~~L--G~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~ 455 (1196)
+.++|++.+.+ |.|+||.||++.++.++..+|+|.+....... .|+.....+ +||||++++++|..
T Consensus 12 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------~e~~~~~~~~~h~~iv~~~~~~~~---- 80 (267)
T PHA03390 12 FLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-------IEPMVHQLMKDNPNFIKLYYSVTT---- 80 (267)
T ss_pred HHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-------hhHHHHHHhhcCCCEEEEEEEEec----
Confidence 34567776666 99999999999999999999999987543221 122222222 79999999988743
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|+||||++ ++|.+++.....+++.+++.++.||+.||.|
T Consensus 81 ------------------------------------~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~ 124 (267)
T PHA03390 81 ------------------------------------LKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALND 124 (267)
T ss_pred ------------------------------------CCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 346899999996 5999999887799999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCC-CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
||+.|++||||||+||+++.++ .++|+|||+++.... .....|+..|+|||++.+ ..++
T Consensus 125 lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~-------------------~~~~~~~~~y~aPE~~~~-~~~~ 184 (267)
T PHA03390 125 LHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGT-------------------PSCYDGTLDYFSPEKIKG-HNYD 184 (267)
T ss_pred HHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCC-------------------CccCCCCCcccChhhhcC-CCCC
Confidence 9999999999999999999998 999999999875421 122368899999999987 5689
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhc-CCCCCccccCCHHHHHHHHHcccCCCCCCCC-HHHHHhccC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK-GELPPSWVAKFSEQESLLRRLMSPSPSDRPS-ATELLQDAL 688 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~-~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-a~eiL~~~~ 688 (1196)
.++|||||||++|||++ ||............+... ...++.+...++.+.++|.+||+.||.+||+ ++++|+|+|
T Consensus 185 ~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~ 264 (267)
T PHA03390 185 VSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPF 264 (267)
T ss_pred chhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCc
Confidence 99999999999999996 776443322211222111 2222333456789999999999999999996 699999999
Q ss_pred CCC
Q 000993 689 PPQ 691 (1196)
Q Consensus 689 ~~~ 691 (1196)
|.+
T Consensus 265 ~~~ 267 (267)
T PHA03390 265 LKI 267 (267)
T ss_pred ccC
Confidence 864
|
|
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=316.85 Aligned_cols=247 Identities=24% Similarity=0.357 Sum_probs=195.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
++|.+.+.||+|+||+||++.+. .++..+|+|.+... .......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 78 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVE---- 78 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec----
Confidence 57899999999999999999863 34567999987532 33445678999999999999999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-------------CCCHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-------------HFDKELA 521 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-------------~l~e~~~ 521 (1196)
...+|++|||++ ++|.+++.... .+++..+
T Consensus 79 ------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~ 122 (288)
T cd05093 79 ------------------------------------GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQM 122 (288)
T ss_pred ------------------------------------CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHH
Confidence 345799999997 59999886443 4899999
Q ss_pred HHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCC
Q 000993 522 WHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYT 601 (1196)
Q Consensus 522 ~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 601 (1196)
+.++.||+.||+|||++|++||||||+|||++.++.+||+|||+++....... ........+++.|+
T Consensus 123 ~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~ 189 (288)
T cd05093 123 LHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDY-------------YRVGGHTMLPIRWM 189 (288)
T ss_pred HHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccCCccccccCCce-------------eecCCCCCcccccc
Confidence 99999999999999999999999999999999999999999999975432110 01122345678999
Q ss_pred CchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCC
Q 000993 602 APEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677 (1196)
Q Consensus 602 APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~R 677 (1196)
|||++.+ ..++.++|||||||++|+|++ ||.............. ...++.....++++.+|+.+||+.||.+|
T Consensus 190 aPE~~~~-~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~R 266 (288)
T cd05093 190 PPESIMY-RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ--GRVLQRPRTCPKEVYDLMLGCWQREPHMR 266 (288)
T ss_pred CHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc--CCcCCCCCCCCHHHHHHHHHHccCChhhC
Confidence 9999987 568999999999999999986 5655444443333322 22222233456789999999999999999
Q ss_pred CCHHHHHh
Q 000993 678 PSATELLQ 685 (1196)
Q Consensus 678 Pta~eiL~ 685 (1196)
||+.+++.
T Consensus 267 pt~~~v~~ 274 (288)
T cd05093 267 LNIKEIHS 274 (288)
T ss_pred CCHHHHHH
Confidence 99999975
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-33 Score=308.68 Aligned_cols=247 Identities=30% Similarity=0.554 Sum_probs=204.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|++.+.||.|+||.||++.++.+++.+|+|.+............+.+|+.+++.++||||+++++++.+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---------- 70 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLD---------- 70 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhcc----------
Confidence 5889999999999999999999999999999997655444556678899999999999999999877632
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....|++|||+++ +|.+++.. ...+++..++.++.|++.||+|||
T Consensus 71 ------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh 120 (256)
T cd08530 71 ------------------------------GNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH 120 (256)
T ss_pred ------------------------------CCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 3568999999975 89988865 356899999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
+.|++|+||+|+||+++.++.+||+|||++...... ......+++.|+|||.+.+ ..++.++
T Consensus 121 ~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-----------------~~~~~~~~~~~~~Pe~~~~-~~~~~~~ 182 (256)
T cd08530 121 EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN-----------------MAKTQIGTPHYMAPEVWKG-RPYSYKS 182 (256)
T ss_pred hCCcccCCCCcceEEEecCCcEEEeeccchhhhccC-----------------CcccccCCccccCHHHHCC-CCCCchh
Confidence 999999999999999999999999999999765321 0122467889999999987 5688999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
|+||||+++|+|++ ||............. ....++.....+.++.+++.+||+.+|.+||++.++++||+
T Consensus 183 D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~ 255 (256)
T cd08530 183 DIWSLGCLLYEMATFAPPFEARSMQDLRYKVQ--RGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPA 255 (256)
T ss_pred hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh--cCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCC
Confidence 99999999999986 776555443333222 23333333355678999999999999999999999999986
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=320.52 Aligned_cols=255 Identities=23% Similarity=0.398 Sum_probs=203.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||.|+||.||++.+..+++.||+|.+..... ...+.+.+|+.+++.++||||+++++.|..
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-------- 87 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKHPNIVNYLDSYLV-------- 87 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc--hHHHHHHHHHHHHhhcCCCCeeehhheeee--------
Confidence 4789999999999999999999988999999999864332 335678899999999999999999987732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....|+|+||++ ++|.+++.+ ..+++..+..++.|++.||+|||++
T Consensus 88 --------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~ 134 (293)
T cd06647 88 --------------------------------GDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSN 134 (293)
T ss_pred --------------------------------CCcEEEEEecCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 345799999996 589888765 3588999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|++||||||+||+++.++.+||+|||++....... .......|++.|+|||.+.+ ..++.++|+
T Consensus 135 gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv 198 (293)
T cd06647 135 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---------------SKRSTMVGTPYWMAPEVVTR-KAYGPKVDI 198 (293)
T ss_pred CEeeccCCHHHEEEcCCCCEEEccCcceecccccc---------------cccccccCChhhcCchhhcc-CCCCchhhH
Confidence 99999999999999999999999999987543211 11223468899999999887 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
|||||++|+|++ ||....................+.....+..++++|++||..+|.+||++.+++.|+||....
T Consensus 199 ~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 199 WSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred HHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 999999999996 776544333222111111111112223456789999999999999999999999999997653
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=328.41 Aligned_cols=251 Identities=24% Similarity=0.333 Sum_probs=193.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~ 454 (1196)
++|++.+.||+|+||.||+|.+. .+++.||||+++... .......+.+|+.+|..+ +||||++++++|...
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-- 83 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKP-- 83 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC-ChHHHHHHHHHHHHHHhccCCccHhhhcceeecC--
Confidence 57899999999999999999853 467899999987433 233456788999999999 789999999877431
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--------------------
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------------------- 513 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------------------- 513 (1196)
...++++||||+ |+|.+++...
T Consensus 84 -------------------------------------~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~ 126 (343)
T cd05103 84 -------------------------------------GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSG 126 (343)
T ss_pred -------------------------------------CCceEEEEeccCCCcHHHHHHhcCCcccccccccccccccccc
Confidence 245789999997 5999888642
Q ss_pred -----------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCC
Q 000993 514 -----------------------------------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 546 (1196)
Q Consensus 514 -----------------------------------------------~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLK 546 (1196)
..++...+..++.||+.||+|||++||+|||||
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dik 206 (343)
T cd05103 127 YGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLA 206 (343)
T ss_pred ccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCc
Confidence 136777888999999999999999999999999
Q ss_pred cCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHH
Q 000993 547 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 626 (1196)
Q Consensus 547 p~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLy 626 (1196)
|+|||++.++.+||+|||+++....... ........+++.|+|||++.+ ..++.++|||||||++|
T Consensus 207 p~Nil~~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~ 272 (343)
T cd05103 207 ARNILLSENNVVKICDFGLARDIYKDPD-------------YVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLW 272 (343)
T ss_pred cCeEEEcCCCcEEEEecccccccccCcc-------------hhhcCCCCCCcceECcHHhcC-CCCCchhhHHHHHHHHH
Confidence 9999999999999999999976421110 011122346678999999887 56899999999999999
Q ss_pred Hhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 627 ELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 627 ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|++ ||............+. ....++.....++++.+++.+||+.||.+|||+.++++|
T Consensus 273 el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 273 EIFSLGASPYPGVKIDEEFCRRLK-EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred HHHHCCCCCCCCccccHHHHHHHh-ccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 9985 6654332222222222 222222222345789999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=315.30 Aligned_cols=252 Identities=26% Similarity=0.362 Sum_probs=191.4
Q ss_pred CCc-eEEeeeccCCcEEEEEEEE----ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDF-EELQPLGHGGFGHVVLCKN----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y-~~~~~LG~G~fG~Vy~a~~----~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
++| .+++.||+|+||+||++.. ..++..||+|.++... .......+.+|+.+|+.++||||+++++++...
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--- 78 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC-GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQ--- 78 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---
Confidence 344 8899999999999988753 3568899999986432 223456788999999999999999999887431
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+|++|||++ ++|.+++.. ..+++.+++.++.|++.||+|
T Consensus 79 -----------------------------------~~~~~~lv~e~~~~~~l~~~~~~-~~l~~~~~~~i~~~l~~~l~~ 122 (283)
T cd05080 79 -----------------------------------GGKGLQLIMEYVPLGSLRDYLPK-HKLNLAQLLLFAQQICEGMAY 122 (283)
T ss_pred -----------------------------------CCceEEEEecCCCCCCHHHHHHH-cCCCHHHHHHHHHHHHHHHHH
Confidence 2346799999997 589888865 459999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++.+||+|||+++........ ........++..|+|||.+.+ ..++.
T Consensus 123 lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~~~~PE~~~~-~~~~~ 189 (283)
T cd05080 123 LHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY------------YRVREDGDSPVFWYAVECLKE-NKFSY 189 (283)
T ss_pred HHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchh------------hccCCCCCCCceeeCHhHhcc-cCCCc
Confidence 99999999999999999999999999999999865321100 000122345677999999887 56899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHH-------------HHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQI-------------VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP 678 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~-------------~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP 678 (1196)
++||||||+++|||++ ||........ ...........++.....+.++.+++.+||+.||++||
T Consensus 190 ~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp 269 (283)
T cd05080 190 ASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRP 269 (283)
T ss_pred ccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCC
Confidence 9999999999999997 5532211100 00001111122222334567899999999999999999
Q ss_pred CHHHHHh
Q 000993 679 SATELLQ 685 (1196)
Q Consensus 679 ta~eiL~ 685 (1196)
|+.++++
T Consensus 270 s~~~i~~ 276 (283)
T cd05080 270 TFRSLIP 276 (283)
T ss_pred CHHHHHH
Confidence 9999986
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-33 Score=320.42 Aligned_cols=252 Identities=25% Similarity=0.408 Sum_probs=203.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
..|+..+.||+|+||.||+|++..++..||+|++..... .......+.+|+.+++.++|||++++++++.+
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------- 96 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLR-------- 96 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEee--------
Confidence 457888999999999999999998999999999875432 33345678899999999999999999998743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....|+||||++|+|.+++.. ..++++.++..++.||+.||.|||++
T Consensus 97 --------------------------------~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~ 144 (317)
T cd06635 97 --------------------------------EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH 144 (317)
T ss_pred --------------------------------CCeEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 345799999999988887754 45689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--CCCCCCcc
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 616 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~s~ks 616 (1196)
||+||||+|+||+++.++.+||+|||++..... .....|++.|+|||++.. ...++.++
T Consensus 145 ~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~-------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 205 (317)
T cd06635 145 NMIHRDIKAGNILLTEPGQVKLADFGSASIASP-------------------ANSFVGTPYWMAPEVILAMDEGQYDGKV 205 (317)
T ss_pred CcccCCCCcccEEECCCCCEEEecCCCccccCC-------------------cccccCCccccChhhhhcCCCCCCCccc
Confidence 999999999999999999999999999864321 123468899999998742 24588999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|||||||++|||++ ||.............. ....+......++.++++|.+||+.+|.+||++.++++|+|+...
T Consensus 206 Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 206 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-NESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred cHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHh-ccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence 99999999999996 7765544433333322 222222233455689999999999999999999999999987543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=316.28 Aligned_cols=254 Identities=26% Similarity=0.458 Sum_probs=207.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.+.|+..+.||.|+||.||+|.+..++..||+|++..... ....+.+|+..++.++||||+++++++..
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------- 86 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLV-------- 86 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEE--------
Confidence 3678888999999999999999998999999999975433 45678899999999999999999988743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....|+++||++ ++|.+++.... .++...++.++.||+.||+|||+
T Consensus 87 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~ 134 (286)
T cd06614 87 --------------------------------GDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHS 134 (286)
T ss_pred --------------------------------CCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 356799999998 69999998876 89999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+|++|+||||+||+++.++.++|+|||++........ ......+++.|+|||++.+ ..++.++|
T Consensus 135 ~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---------------~~~~~~~~~~y~~PE~~~~-~~~~~~~D 198 (286)
T cd06614 135 QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS---------------KRNSVVGTPYWMAPEVIKR-KDYGPKVD 198 (286)
T ss_pred CCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh---------------hhccccCCcccCCHhHhcC-CCCCCccc
Confidence 9999999999999999999999999999875432110 1123457889999999887 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
+|||||++|+|++ ||..........................+..+.++|++||+.+|.+||++.++++|+|+.+.
T Consensus 199 v~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 276 (286)
T cd06614 199 IWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKA 276 (286)
T ss_pred cHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhcc
Confidence 9999999999997 76655443333322221111111222356789999999999999999999999999999874
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=315.76 Aligned_cols=248 Identities=29% Similarity=0.408 Sum_probs=197.4
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCCc
Q 000993 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 467 (1196)
Q Consensus 389 LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 467 (1196)
||+|+||+||+|.+..+|+.||+|++...... ......+.+|+.+|+.++||||+++++++..
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---------------- 64 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFET---------------- 64 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEec----------------
Confidence 69999999999999999999999998754322 2234456789999999999999999987622
Q ss_pred ccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCcccC
Q 000993 468 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544 (1196)
Q Consensus 468 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLHs~gIiHrD 544 (1196)
...+|+||||++ ++|.+++.... .+++..++.++.|++.||.|||++|++|||
T Consensus 65 ------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~d 120 (277)
T cd05577 65 ------------------------KDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRD 120 (277)
T ss_pred ------------------------CCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 356799999997 59999987655 799999999999999999999999999999
Q ss_pred CCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHH
Q 000993 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 624 (1196)
Q Consensus 545 LKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGvi 624 (1196)
|+|+||+++.++.+||+|||++....... ......++..|+|||.+.+ ..++.++|||||||+
T Consensus 121 i~p~Nil~~~~~~~~l~dfg~~~~~~~~~----------------~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~i 183 (277)
T cd05577 121 LKPENVLLDDHGNVRISDLGLAVELKGGK----------------KIKGRAGTPGYMAPEVLQG-EVYDFSVDWFALGCT 183 (277)
T ss_pred CCHHHEEECCCCCEEEccCcchhhhccCC----------------ccccccCCCCcCCHHHhcC-CCCCchhhhHHHHHH
Confidence 99999999999999999999987643210 1123467889999999887 458999999999999
Q ss_pred HHHhhc---CCchhHH---HHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccCCCCch
Q 000993 625 FFELWH---PFSTAME---RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQME 693 (1196)
Q Consensus 625 LyELlt---Pf~~~~~---~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~~~~~~ 693 (1196)
+|+|++ ||..... ......... ..........++.+.++|++||+.||.+|| ++.++++|+|+....
T Consensus 184 l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~ 261 (277)
T cd05577 184 LYEMIAGRSPFRQRKEKVEKEELKRRTL--EMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLN 261 (277)
T ss_pred HHHHhhCCCCCCCCcccccHHHHHhccc--cccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCC
Confidence 999996 7754432 111111111 111112223467899999999999999999 899999999998876
Q ss_pred HH
Q 000993 694 YE 695 (1196)
Q Consensus 694 ~~ 695 (1196)
+.
T Consensus 262 ~~ 263 (277)
T cd05577 262 WR 263 (277)
T ss_pred hh
Confidence 54
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=314.62 Aligned_cols=251 Identities=29% Similarity=0.454 Sum_probs=202.7
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
-|.+.+.||.|+||.||+|.+..++..||||++..... ......+.+|+.+++.++||||++++++|..
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---------- 73 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLK---------- 73 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEe----------
Confidence 46788999999999999999998999999998864432 2345678899999999999999999988743
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
..++|+||||+++ +|.+++.. ..+++..+..++.|++.||.|||+.|+
T Consensus 74 ------------------------------~~~~~lv~e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i 122 (277)
T cd06641 74 ------------------------------DTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKK 122 (277)
T ss_pred ------------------------------CCeEEEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCe
Confidence 3568999999975 88887764 568999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+|+||||+||+++.++.++|+|||++..+.... .......++..|+|||.+.+ ..++.++|+||
T Consensus 123 ~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~s 186 (277)
T cd06641 123 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ---------------IKRNTFVGTPFWMAPEVIKQ-SAYDSKADIWS 186 (277)
T ss_pred ecCCCCHHhEEECCCCCEEEeecccceecccch---------------hhhccccCCccccChhhhcc-CCCCchhhHHH
Confidence 999999999999999999999999987543211 11123468889999999876 56789999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|||++|+|++ ||............. ....+......+.++.++|.+||+.+|.+||++.++++|+|+.+.
T Consensus 187 lG~~l~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 187 LGITAIELAKGEPPHSELHPMKVLFLIP--KNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred HHHHHHHHHcCCCCCCccchHHHHHHHh--cCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence 9999999997 665544433332221 222222223456789999999999999999999999999998764
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=314.49 Aligned_cols=249 Identities=20% Similarity=0.295 Sum_probs=195.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~-----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
++|.+.+.||+|+||.||+|.+.. ++..||+|.++.. ........+.+|+.+++.++||||+++++++.+
T Consensus 6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---- 80 (277)
T cd05036 6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPES-CSEQDESDFLMEALIMSKFNHQNIVRLIGVSFE---- 80 (277)
T ss_pred HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc----
Confidence 679999999999999999999986 6788999987633 223334578999999999999999999988743
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-------CCCHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-------HFDKELAWHLFRQ 527 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-------~l~e~~~~~i~~q 527 (1196)
....|++|||++ ++|.+++.... .+++..++.++.|
T Consensus 81 ------------------------------------~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~q 124 (277)
T cd05036 81 ------------------------------------RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARD 124 (277)
T ss_pred ------------------------------------CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Confidence 234589999996 59999987543 4889999999999
Q ss_pred HHHHHHHHHhCCCcccCCCcCcEEecCCC---CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCch
Q 000993 528 IVEGLAHIHGQGIIHRDLTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 604 (1196)
Q Consensus 528 Ia~gL~yLHs~gIiHrDLKp~NILld~~~---~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 604 (1196)
|+.||+|||+++++||||||+||+++.++ .+||+|||+++........ ........++.|+|||
T Consensus 125 i~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aPE 191 (277)
T cd05036 125 VAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYY-------------RKGGRAMLPIKWMPPE 191 (277)
T ss_pred HHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccce-------------ecCCCCCccHhhCCHH
Confidence 99999999999999999999999998765 5999999999865221100 0111223457899999
Q ss_pred hccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH
Q 000993 605 IEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA 680 (1196)
Q Consensus 605 ~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta 680 (1196)
++.+ ..++.++|||||||++|||++ ||.............. . ..+......+..+.+++.+||+.+|++||++
T Consensus 192 ~~~~-~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~ 268 (277)
T cd05036 192 AFLD-GIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTG-G-GRLDPPKGCPGPVYRIMTDCWQHTPEDRPNF 268 (277)
T ss_pred HHhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-C-CcCCCCCCCCHHHHHHHHHHcCCCcccCcCH
Confidence 9987 568999999999999999985 7765544433322221 1 1222233456789999999999999999999
Q ss_pred HHHHhc
Q 000993 681 TELLQD 686 (1196)
Q Consensus 681 ~eiL~~ 686 (1196)
.++++|
T Consensus 269 ~~vl~~ 274 (277)
T cd05036 269 ATILER 274 (277)
T ss_pred HHHHHH
Confidence 999986
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=317.13 Aligned_cols=250 Identities=22% Similarity=0.342 Sum_probs=196.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~ 453 (1196)
.++|++.+.||+|+||.||++.++.. ...+|+|.+... ........+.+|+.+++.+ +||||+++++++.+
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-- 87 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ-- 87 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCC-CCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC--
Confidence 36889999999999999999998743 378999988643 2333456788999999999 89999999988732
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------------CCC
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DHF 516 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~l 516 (1196)
...+|++|||++ ++|.+++... ..+
T Consensus 88 --------------------------------------~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l 129 (293)
T cd05053 88 --------------------------------------EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETL 129 (293)
T ss_pred --------------------------------------CCCeEEEEEeCCCCcHHHHHHhcCCCcccccccccccccccc
Confidence 235799999996 5999988542 358
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccc
Q 000993 517 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 596 (1196)
Q Consensus 517 ~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 596 (1196)
++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.+...... .......+
T Consensus 130 ~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~-------------~~~~~~~~ 196 (293)
T cd05053 130 TQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYY-------------RKTTNGRL 196 (293)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccccccce-------------eccCCCCC
Confidence 89999999999999999999999999999999999999999999999999865322110 11122345
Q ss_pred cccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccC
Q 000993 597 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 672 (1196)
Q Consensus 597 T~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~ 672 (1196)
+..|+|||++.+ ..++.++|||||||++|||++ ||......+.. ..+. ....+......+..+.+|+.+||..
T Consensus 197 ~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~li~~~l~~ 273 (293)
T cd05053 197 PVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF-KLLK-EGYRMEKPQNCTQELYHLMRDCWHE 273 (293)
T ss_pred CccccCHHHhcc-CCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHH-HHHH-cCCcCCCCCCCCHHHHHHHHHHccc
Confidence 678999999877 568999999999999999985 66554333322 2222 2223333345567899999999999
Q ss_pred CCCCCCCHHHHHhc
Q 000993 673 SPSDRPSATELLQD 686 (1196)
Q Consensus 673 dP~~RPta~eiL~~ 686 (1196)
||.+|||+.+++++
T Consensus 274 ~p~~Rps~~eil~~ 287 (293)
T cd05053 274 VPSQRPTFKQLVED 287 (293)
T ss_pred CcccCcCHHHHHHH
Confidence 99999999999975
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-33 Score=304.48 Aligned_cols=248 Identities=30% Similarity=0.546 Sum_probs=201.9
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+|+..+.||.|++|.||++.+..+++.+++|++..... .....+.+|+..++.++||||+++++++..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---------- 68 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLK---------- 68 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEec----------
Confidence 58889999999999999999998999999999875433 345688999999999999999999988732
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
....++++||++ ++|.+++... ..+++..++.++.|++.||+|||++|
T Consensus 69 ------------------------------~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~ 118 (253)
T cd05122 69 ------------------------------KDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNG 118 (253)
T ss_pred ------------------------------CCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCC
Confidence 245799999998 5999998776 57999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
++||||+|+||+++.++.++|+|||.+........ .....++..|+|||.+.+ ..++.++|||
T Consensus 119 i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~----------------~~~~~~~~~~~~PE~~~~-~~~~~~~Dv~ 181 (253)
T cd05122 119 IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA----------------RNTMVGTPYWMAPEVING-KPYDYKADIW 181 (253)
T ss_pred EecCCCCHHHEEEccCCeEEEeecccccccccccc----------------ccceecCCcccCHHHHcC-CCCCccccHH
Confidence 99999999999999999999999999976532210 123468899999999987 4588999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
|||+++|+|++ ||....................+.....+..+.++|++||+.||.+|||+.++++|+|
T Consensus 182 slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 182 SLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred HHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 99999999997 6665533333222222111111111222578999999999999999999999999987
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-33 Score=308.21 Aligned_cols=243 Identities=25% Similarity=0.348 Sum_probs=197.8
Q ss_pred eeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcC
Q 000993 387 QPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 463 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~ 463 (1196)
+.||+|+||.||+|.+... +..||+|.++...... ....+.+|+..++.++||||+++++++..
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~------------ 67 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTE------------ 67 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecC------------
Confidence 3689999999999999866 8999999987544332 46788999999999999999999987632
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc---------CCCCHHHHHHHHHHHHHHHH
Q 000993 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY---------DHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 464 ~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~---------~~l~e~~~~~i~~qIa~gL~ 533 (1196)
...++++|||++ ++|.+++... ..+++..++.++.||+.||+
T Consensus 68 ----------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~ 119 (262)
T cd00192 68 ----------------------------EEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGME 119 (262)
T ss_pred ----------------------------CCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHH
Confidence 346799999995 6999999875 67999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++|++||||||+||+++.++.+||+|||.+........ ........+++.|+|||.+.+ ..++
T Consensus 120 ~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~ 185 (262)
T cd00192 120 YLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY-------------YRKKTGGKLPIRWMAPESLKD-GIFT 185 (262)
T ss_pred HHHcCCcccCccCcceEEECCCCcEEEcccccccccccccc-------------cccccCCCcCccccCHHHhcc-CCcc
Confidence 99999999999999999999999999999999986542210 011234567889999999887 4689
Q ss_pred CcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++|||||||++|||++ ||......+....... ...+......++++.+++.+||+.+|.+|||+.+++++
T Consensus 186 ~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 186 SKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK--GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred hhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc--CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 99999999999999985 6766544443333222 22233334456799999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=327.64 Aligned_cols=248 Identities=31% Similarity=0.484 Sum_probs=189.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|.....||+|+||.||+|... +|..||||.+....... ..+|.+|+.+|.+++|||+|+++|+|.+.+
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~------ 144 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGYCLEGG------ 144 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEEEecCC------
Confidence 468888899999999999999987 55999999776433322 456999999999999999999999996531
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...++|+|||+ |+|.++|.... .++|....+|+.++|+||+|||
T Consensus 145 ---------------------------------~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH 191 (361)
T KOG1187|consen 145 ---------------------------------EHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLH 191 (361)
T ss_pred ---------------------------------ceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHc
Confidence 14789999996 79999997655 8999999999999999999999
Q ss_pred hCC---CcccCCCcCcEEecCCCCeEEeccCcchhccc-cccccCCCCCCCCCCccccCcCc-cccccCCCchhccCCCC
Q 000993 537 GQG---IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL-EQLDQDAAFPTDTGGVSVDGTGQ-VGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 537 s~g---IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~GT~~Y~APE~l~~~~~ 611 (1196)
... ||||||||+|||+|++.++||+|||+|+.... .. ..... .||.+|+|||++.. +.
T Consensus 192 ~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~----------------~~~~~~~gt~gY~~PEy~~~-g~ 254 (361)
T KOG1187|consen 192 EGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDT----------------SVSTTVMGTFGYLAPEYAST-GK 254 (361)
T ss_pred cCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcccc----------------ceeeecCCCCccCChhhhcc-CC
Confidence 864 99999999999999999999999999964321 10 01112 79999999999987 67
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhH---HH--HHHHHHhhhcCCC----CCccc--cC-----CHHHHHHHHHcccC
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAM---ER--QIVLSDLKQKGEL----PPSWV--AK-----FSEQESLLRRLMSP 672 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~---~~--~~~~~~l~~~~~~----p~~~~--~~-----~~~l~~LI~~cL~~ 672 (1196)
.+.|+|||||||+|.||++ |..... .. ............+ .+... .. ...+..+..+|++.
T Consensus 255 lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~ 334 (361)
T KOG1187|consen 255 LTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRP 334 (361)
T ss_pred cCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCc
Confidence 9999999999999999997 222111 10 1111111111111 11111 11 12356788899999
Q ss_pred CCCCCCCHHHHHhc
Q 000993 673 SPSDRPSATELLQD 686 (1196)
Q Consensus 673 dP~~RPta~eiL~~ 686 (1196)
+|.+||++.++++.
T Consensus 335 ~~~~RP~m~~Vv~~ 348 (361)
T KOG1187|consen 335 DPKERPTMSQVVKE 348 (361)
T ss_pred CCCcCcCHHHHHHH
Confidence 99999999998653
|
|
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-33 Score=309.26 Aligned_cols=243 Identities=26% Similarity=0.361 Sum_probs=192.1
Q ss_pred eeeccCCcEEEEEEEEccCC---cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcC
Q 000993 387 QPLGHGGFGHVVLCKNKLDG---RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 463 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g---~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~ 463 (1196)
++||+|+||.||+|.+..++ ..||+|.+...... .....+.+|+.+++.++||||+++++.+.
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------------- 66 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCK------------- 66 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-------------
Confidence 46999999999999886554 78999998754433 45567899999999999999999998651
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcc
Q 000993 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 542 (1196)
Q Consensus 464 ~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiH 542 (1196)
....+++|||++ ++|.+++.....+++..++.++.|++.||+|||+++++|
T Consensus 67 ----------------------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H 118 (257)
T cd05060 67 ----------------------------GEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVH 118 (257)
T ss_pred ----------------------------CCceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeec
Confidence 224689999996 599999988788999999999999999999999999999
Q ss_pred cCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHH
Q 000993 543 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622 (1196)
Q Consensus 543 rDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlG 622 (1196)
|||||+|||++.++.+||+|||+++........ ........++..|+|||.+.+ ..++.++||||||
T Consensus 119 ~di~p~nili~~~~~~kl~df~~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG 185 (257)
T cd05060 119 RDLAARNVLLVNRHQAKISDFGMSRALGAGSDY------------YRATTAGRWPLKWYAPECINY-GKFSSKSDVWSYG 185 (257)
T ss_pred cCcccceEEEcCCCcEEeccccccceeecCCcc------------cccccCccccccccCHHHhcC-CCCCccchHHHHH
Confidence 999999999999999999999999865322100 001112234578999999887 5689999999999
Q ss_pred HHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 623 IVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 623 viLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|++|||++ ||......+... .+. .....+.....++.+.++|.+||..+|.+||++.++++.
T Consensus 186 ~~l~~~~~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~ 251 (257)
T cd05060 186 VTLWEAFSYGAKPYGEMKGAEVIA-MLE-SGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELEST 251 (257)
T ss_pred HHHHHHHcCCCCCcccCCHHHHHH-HHH-cCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 99999985 665554433322 222 222223334456789999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=315.09 Aligned_cols=252 Identities=30% Similarity=0.486 Sum_probs=201.3
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCc
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 462 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~ 462 (1196)
|+..+.||+|+||.||+|++..+++.||+|++............+.+|+.+++.++||||+++++++.+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~----------- 69 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHT----------- 69 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhc-----------
Confidence 567789999999999999999999999999998654334445678899999999999999999987632
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCc
Q 000993 463 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGII 541 (1196)
Q Consensus 463 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~gIi 541 (1196)
...+|+||||++++|.+++... ..+++..++.++.|++.||+|||++||+
T Consensus 70 -----------------------------~~~~~~v~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~ 120 (282)
T cd07829 70 -----------------------------ERKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRIL 120 (282)
T ss_pred -----------------------------CCceEEEecCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 3567999999999999999876 5799999999999999999999999999
Q ss_pred ccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHH
Q 000993 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621 (1196)
Q Consensus 542 HrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSl 621 (1196)
||||+|+||+++.++.+||+|||+++...... .......++..|+|||.+.+...++.++|||||
T Consensus 121 H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~sl 185 (282)
T cd07829 121 HRDLKPQNILINRDGVLKLADFGLARAFGIPL---------------RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSV 185 (282)
T ss_pred cCCCChheEEEcCCCCEEEecCCcccccCCCc---------------cccCccccCcCcCChHHhcCCcCCCccccHHHH
Confidence 99999999999999999999999997643211 012234567889999998774478999999999
Q ss_pred HHHHHHhhc---CCchhHHHHHHHHHhhh------------------cCCCC--------CccccCCHHHHHHHHHcccC
Q 000993 622 GIVFFELWH---PFSTAMERQIVLSDLKQ------------------KGELP--------PSWVAKFSEQESLLRRLMSP 672 (1196)
Q Consensus 622 GviLyELlt---Pf~~~~~~~~~~~~l~~------------------~~~~p--------~~~~~~~~~l~~LI~~cL~~ 672 (1196)
||++|||++ ||............... ....+ ......+..+.++|++||..
T Consensus 186 G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 265 (282)
T cd07829 186 GCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQY 265 (282)
T ss_pred HHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhcc
Confidence 999999997 56543332222111110 00000 01112356789999999999
Q ss_pred CCCCCCCHHHHHhccCC
Q 000993 673 SPSDRPSATELLQDALP 689 (1196)
Q Consensus 673 dP~~RPta~eiL~~~~~ 689 (1196)
||.+||++.+++.||||
T Consensus 266 ~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 266 NPAKRISAKEALKHPYF 282 (282)
T ss_pred CcccCCCHHHHhhCcCC
Confidence 99999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=311.44 Aligned_cols=256 Identities=32% Similarity=0.494 Sum_probs=203.5
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCCc
Q 000993 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 467 (1196)
Q Consensus 389 LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 467 (1196)
||.|+||.||+|.+..+|+.||+|++..... .......+.+|+.+++.++||||+++++++.
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~----------------- 63 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQ----------------- 63 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhee-----------------
Confidence 6899999999999998999999999865432 2234567889999999999999999987652
Q ss_pred ccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCC
Q 000993 468 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 546 (1196)
Q Consensus 468 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLK 546 (1196)
....+|++|||++ ++|.+++.+...+++..++.++.||+.||+|||++|++||||+
T Consensus 64 -----------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~ 120 (265)
T cd05579 64 -----------------------GKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLK 120 (265)
T ss_pred -----------------------cCcEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCC
Confidence 2456899999996 5999999887889999999999999999999999999999999
Q ss_pred cCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHH
Q 000993 547 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 626 (1196)
Q Consensus 547 p~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLy 626 (1196)
|+||+++.++.++|+|||++.......... ............++..|+|||.+.+ ..++.++||||||+++|
T Consensus 121 ~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Dv~slG~~~~ 192 (265)
T cd05579 121 PDNILIDSNGHLKLTDFGLSKVGLVRRQIN-------LNDDEKEDKRIVGTPDYIAPEVILG-QGHSKTVDWWSLGCILY 192 (265)
T ss_pred HHHeEEcCCCCEEEEecccchhcccCcccc-------cccccccccCcccCccccCHHHhcC-CCCCcchhhHHHHHHHH
Confidence 999999999999999999987543221100 0000112234568899999999887 45889999999999999
Q ss_pred Hhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH---HHHHhccCCCCch
Q 000993 627 ELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA---TELLQDALPPQME 693 (1196)
Q Consensus 627 ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta---~eiL~~~~~~~~~ 693 (1196)
+|++ ||......+............+ .....++.+.+++++||+.+|.+|||+ .++++|+||..+.
T Consensus 193 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~~ 264 (265)
T cd05579 193 EFLVGIPPFHGETPEEIFQNILNGKIEWP-EDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGID 264 (265)
T ss_pred HHHhCCCCCCCCCHHHHHHHHhcCCcCCC-ccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCCC
Confidence 9997 7766555554443333222222 222246789999999999999999999 9999999998654
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=315.52 Aligned_cols=252 Identities=27% Similarity=0.456 Sum_probs=201.6
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCc
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 462 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~ 462 (1196)
|++.+.||.|++|.||+|.+..+|+.+|+|.++...........+.+|+.+++.++||||+++++.+.
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~------------ 68 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFR------------ 68 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhc------------
Confidence 56778999999999999999999999999998765544445677889999999999999999997762
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCc
Q 000993 463 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGII 541 (1196)
Q Consensus 463 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~gIi 541 (1196)
....+|++|||++++|.+++... ..+++..++.++.||+.||+|||+++|+
T Consensus 69 ----------------------------~~~~~~~v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~ 120 (283)
T cd05118 69 ----------------------------HKGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGIL 120 (283)
T ss_pred ----------------------------cCCCEEEEEeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 23567999999999999888764 5799999999999999999999999999
Q ss_pred ccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHH
Q 000993 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621 (1196)
Q Consensus 542 HrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSl 621 (1196)
|+||||+||+++.++.+||+|||.+....... .......++..|+|||.+.+...++.++|+|||
T Consensus 121 H~dl~p~nili~~~~~~~l~df~~~~~~~~~~---------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~sl 185 (283)
T cd05118 121 HRDLKPENLLINTEGVLKLADFGLARSFGSPV---------------RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSV 185 (283)
T ss_pred ecCcCHHHEEECCCCcEEEeeeeeeEecCCCc---------------ccccCccCcccccCcHHHhcCCCCCchhHHHHH
Confidence 99999999999999999999999997653221 011234678899999998875468999999999
Q ss_pred HHHHHHhhc---CCchhHHHHHHHHHhhhcCC-------------------C--------CCccccCCHHHHHHHHHccc
Q 000993 622 GIVFFELWH---PFSTAMERQIVLSDLKQKGE-------------------L--------PPSWVAKFSEQESLLRRLMS 671 (1196)
Q Consensus 622 GviLyELlt---Pf~~~~~~~~~~~~l~~~~~-------------------~--------p~~~~~~~~~l~~LI~~cL~ 671 (1196)
|+++|+|++ ||......+.........+. + ...+...+.++.++|.+||+
T Consensus 186 G~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 265 (283)
T cd05118 186 GCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLH 265 (283)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhc
Confidence 999999997 56443332222111111000 0 01122345678999999999
Q ss_pred CCCCCCCCHHHHHhccCC
Q 000993 672 PSPSDRPSATELLQDALP 689 (1196)
Q Consensus 672 ~dP~~RPta~eiL~~~~~ 689 (1196)
.||.+||++.+++.|+|+
T Consensus 266 ~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 266 YDPHKRITAEQALAHPYF 283 (283)
T ss_pred cCcccCcCHHHHhhCCCC
Confidence 999999999999999996
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-33 Score=317.60 Aligned_cols=246 Identities=22% Similarity=0.315 Sum_probs=193.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc--EEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGR--HYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~ 457 (1196)
++|++.+.||+|+||.||+|.++.++. .+++|.++. .......+.+.+|+.+++++ +||||+++++++.+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~-~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~------ 74 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKE-FASENDHRDFAGELEVLCKLGHHPNIINLLGACEN------ 74 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccc-cCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc------
Confidence 689999999999999999999987765 468887752 22333456789999999999 79999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----------------CCCHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HFDKEL 520 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l~e~~ 520 (1196)
...+|++|||++ ++|.+++.... .+++..
T Consensus 75 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~ 120 (297)
T cd05089 75 ----------------------------------RGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQ 120 (297)
T ss_pred ----------------------------------CCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHH
Confidence 235799999997 59999986532 478899
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccC
Q 000993 521 AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFY 600 (1196)
Q Consensus 521 ~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y 600 (1196)
++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++...... ........+..|
T Consensus 121 ~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~----------------~~~~~~~~~~~y 184 (297)
T cd05089 121 LLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVY----------------VKKTMGRLPVRW 184 (297)
T ss_pred HHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCccccce----------------eccCCCCcCccc
Confidence 9999999999999999999999999999999999999999999998632110 011112335679
Q ss_pred CCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCC
Q 000993 601 TAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 676 (1196)
Q Consensus 601 ~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~ 676 (1196)
+|||++.+ ..++.++|||||||++|||++ ||.............. ...++.....++.+.+||.+||+.+|.+
T Consensus 185 ~aPE~~~~-~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~ 261 (297)
T cd05089 185 MAIESLNY-SVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQ--GYRMEKPRNCDDEVYELMRQCWRDRPYE 261 (297)
T ss_pred cCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHcCCChhh
Confidence 99999887 568999999999999999985 7766555443333222 2222223346678999999999999999
Q ss_pred CCCHHHHHhc
Q 000993 677 RPSATELLQD 686 (1196)
Q Consensus 677 RPta~eiL~~ 686 (1196)
||+++++++.
T Consensus 262 Rp~~~~i~~~ 271 (297)
T cd05089 262 RPPFAQISVQ 271 (297)
T ss_pred CcCHHHHHHH
Confidence 9999999865
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-33 Score=309.79 Aligned_cols=242 Identities=22% Similarity=0.326 Sum_probs=189.6
Q ss_pred eeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCC
Q 000993 388 PLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 465 (1196)
Q Consensus 388 ~LG~G~fG~Vy~a~~~--~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 465 (1196)
.||+|+||.||+|.+. .++..||+|++.... .....+.+.+|+.+++.++||||+++++++.
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~--------------- 65 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE--------------- 65 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc---------------
Confidence 4899999999999875 345679999886432 3344567899999999999999999998761
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 466 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 466 g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...+++||||++ ++|.+++.. ...+++..++.++.||+.||+|||++|++||
T Consensus 66 --------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 119 (257)
T cd05115 66 --------------------------AEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHR 119 (257)
T ss_pred --------------------------CCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeec
Confidence 234689999997 589998874 4579999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+++.+..... .....+...+++.|+|||++.+ ..++.++|||||||
T Consensus 120 dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~ 186 (257)
T cd05115 120 DLAARNVLLVNQHYAKISDFGLSKALGADDS------------YYKARSAGKWPLKWYAPECINF-RKFSSRSDVWSYGI 186 (257)
T ss_pred ccchheEEEcCCCcEEeccCCccccccCCcc------------ceeccCCCCCCcccCCHHHHcc-CCCCchhhHHHHHH
Confidence 9999999999999999999999975432110 0011122344678999999887 56899999999999
Q ss_pred HHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 624 VFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 624 iLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++|||++ ||.......... .+. .+..++.....++++.++|.+||..||++||++.+|.+.
T Consensus 187 ~l~el~~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~ 251 (257)
T cd05115 187 TMWEAFSYGQKPYKKMKGPEVMS-FIE-QGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEER 251 (257)
T ss_pred HHHHHhcCCCCCcCcCCHHHHHH-HHH-CCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999984 776554444332 222 222233334557899999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=306.94 Aligned_cols=271 Identities=24% Similarity=0.411 Sum_probs=209.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..+.|+-+.+||+|.||+||+|+++.+|+.||+|++-..+.....-...++|+.+|..+.|+|++.+++.|-....
T Consensus 15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~T---- 90 (376)
T KOG0669|consen 15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKAT---- 90 (376)
T ss_pred cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccC----
Confidence 3467788899999999999999999999999999765433222233467899999999999999999987732210
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....+...+|+|+.+|..+|..++... .+|+..++.+++.++..||.|+|+
T Consensus 91 ----------------------------p~~r~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr 142 (376)
T KOG0669|consen 91 ----------------------------PTNRDRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHR 142 (376)
T ss_pred ----------------------------CcccccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHH
Confidence 001234578999999999999999766 679999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+.|+|||+||.|+||+.+|.+||+|||+|+.+......... ..+.++-|.+|.+||.+.|...|+++.|
T Consensus 143 ~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kp-----------rytnrvvTLwYrppEllLG~r~yg~~iD 211 (376)
T KOG0669|consen 143 NKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKP-----------RYTNRVVTLWYRPPELLLGDREYGPPID 211 (376)
T ss_pred hhHHhhcccHhhEEEcCCceEEeeccccccceecccccCCC-----------CcccceeeeecCCHHHhhcccccCCcch
Confidence 99999999999999999999999999999876544322211 2356788999999999999999999999
Q ss_pred hHHHHHHHHHhhc--CC-chhHHHHHHHHHhhhcCCC-CCcccc-------------------------------CCHHH
Q 000993 618 MYSLGIVFFELWH--PF-STAMERQIVLSDLKQKGEL-PPSWVA-------------------------------KFSEQ 662 (1196)
Q Consensus 618 VwSlGviLyELlt--Pf-~~~~~~~~~~~~l~~~~~~-p~~~~~-------------------------------~~~~l 662 (1196)
||..|||+.||+| |. .+..+.+...-+-...+.+ +..|++ ..+++
T Consensus 212 iWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a 291 (376)
T KOG0669|consen 212 IWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEA 291 (376)
T ss_pred hHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhH
Confidence 9999999999997 43 3333332221111101111 001110 11356
Q ss_pred HHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 663 ESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 663 ~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
.+|+..+|..||.+|+++++++.|.||...
T Consensus 292 ~dLle~ll~~DP~kR~~ad~alnh~~F~kd 321 (376)
T KOG0669|consen 292 LDLLEKLLKLDPTKRIDADQALNHDFFWKD 321 (376)
T ss_pred HHHHHHHhccCcccCcchHhhhchhhhhcC
Confidence 799999999999999999999999988654
|
|
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-33 Score=315.20 Aligned_cols=252 Identities=24% Similarity=0.395 Sum_probs=194.5
Q ss_pred CceEEeeeccCCcEEEEEEEE----ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 382 DFEELQPLGHGGFGHVVLCKN----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~----~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
-|.+++.||+|+||.||+|++ +.++..||+|.++... .......+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 78 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTED----- 78 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC-----
Confidence 468899999999999999985 4568899999986432 334456799999999999999999999887331
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
.....|++|||++ ++|.+++.+. ..+++..++.++.||+.||+||
T Consensus 79 ---------------------------------~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~l 125 (284)
T cd05079 79 ---------------------------------GGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYL 125 (284)
T ss_pred ---------------------------------CCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 1245799999996 5999998764 3589999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++|++||||||+||+++.++.+||+|||+++.+...... ........++..|+|||++.+ ..++.+
T Consensus 126 H~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~apE~~~~-~~~~~~ 192 (284)
T cd05079 126 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEY------------YTVKDDLDSPVFWYAPECLIQ-SKFYIA 192 (284)
T ss_pred HHCCeeecccchheEEEcCCCCEEECCCccccccccCccc------------eeecCCCCCCccccCHHHhcc-CCCCcc
Confidence 9999999999999999999999999999999865322100 001123457788999999887 568999
Q ss_pred chhHHHHHHHHHhhc---CCchhH--------------HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC
Q 000993 616 ADMYSLGIVFFELWH---PFSTAM--------------ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP 678 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~--------------~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP 678 (1196)
+|||||||++|||++ |+.... ........+. .....+.+...+..+.+|+.+||+.||.+||
T Consensus 193 ~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 271 (284)
T cd05079 193 SDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLE-EGKRLPRPPNCPEEVYQLMRKCWEFQPSKRT 271 (284)
T ss_pred ccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHH-cCccCCCCCCCCHHHHHHHHHHccCCcccCc
Confidence 999999999999986 221100 0011111111 2222333445678999999999999999999
Q ss_pred CHHHHHhc
Q 000993 679 SATELLQD 686 (1196)
Q Consensus 679 ta~eiL~~ 686 (1196)
|+.+++++
T Consensus 272 t~~~il~~ 279 (284)
T cd05079 272 TFQNLIEG 279 (284)
T ss_pred CHHHHHHH
Confidence 99999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-33 Score=315.30 Aligned_cols=257 Identities=28% Similarity=0.423 Sum_probs=201.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.++|++.+.||.|+||.||+|.+..+++.||||.++..... .....+.+|+.++... .||||+++++++.+
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~------- 85 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK-EENKRILMDLDVVLKSHDCPYIVKCYGYFIT------- 85 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh-HHHHHHHHHHHHHHhccCCCchHhhheeeec-------
Confidence 57899999999999999999999988999999998754332 2345667788777666 49999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|++|||+++.+.+++.. ...+++..+..++.||+.||+|||+
T Consensus 86 ---------------------------------~~~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~ 132 (296)
T cd06618 86 ---------------------------------DSDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKE 132 (296)
T ss_pred ---------------------------------CCeEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 356899999999888887765 4578999999999999999999997
Q ss_pred -CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC---CCCC
Q 000993 538 -QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW---PKID 613 (1196)
Q Consensus 538 -~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~~s 613 (1196)
.||+||||+|+||+++.++.+||+|||++..+.... ......+++.|+|||.+.+. +.++
T Consensus 133 ~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~ 196 (296)
T cd06618 133 KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK----------------AKTRSAGCAAYMAPERIDPPDPNPKYD 196 (296)
T ss_pred hCCEecCCCcHHHEEEcCCCCEEECccccchhccCCC----------------cccCCCCCccccCHhhcCCCCCccccc
Confidence 599999999999999999999999999987643211 01223578899999998763 2378
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHH-HHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMER-QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~-~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
.++||||||+++|+|++ ||...... +.....+.......+.....+.++.+||.+||+.||.+||+++++++|+|+
T Consensus 197 ~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~ 276 (296)
T cd06618 197 IRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFI 276 (296)
T ss_pred cchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhh
Confidence 89999999999999997 77543322 222222222211112222356789999999999999999999999999998
Q ss_pred CCch
Q 000993 690 PQME 693 (1196)
Q Consensus 690 ~~~~ 693 (1196)
....
T Consensus 277 ~~~~ 280 (296)
T cd06618 277 RRYE 280 (296)
T ss_pred hccc
Confidence 8654
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-34 Score=305.52 Aligned_cols=261 Identities=25% Similarity=0.410 Sum_probs=211.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCcccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~ 457 (1196)
+++|.++++||+|+|.+|.+++++.|.+.||+|++++... ..+..+-+..|-.+..+. +||.+|.++.||
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscf-------- 320 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCF-------- 320 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhh--------
Confidence 5899999999999999999999999999999999976432 223334455566666555 799999999887
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
+....+++|.||++ |+|.-.+++..+++++.++.+..+|+.||.|||
T Consensus 321 --------------------------------qtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh 368 (593)
T KOG0695|consen 321 --------------------------------QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLH 368 (593)
T ss_pred --------------------------------cccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHh
Confidence 34567899999997 589989999999999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++|||+||||.+|+|+|.+|++||+|+|+++.--.+ + -.++++||||.|.|||++.| ..|+.++
T Consensus 369 ~rgiiyrdlkldnvlldaeghikltdygmcke~l~~------------g---d~tstfcgtpnyiapeilrg-eeygfsv 432 (593)
T KOG0695|consen 369 ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP------------G---DTTSTFCGTPNYIAPEILRG-EEYGFSV 432 (593)
T ss_pred hcCeeeeeccccceEEccCCceeecccchhhcCCCC------------C---cccccccCCCcccchhhhcc-cccCcee
Confidence 999999999999999999999999999999742111 1 12467899999999999999 6899999
Q ss_pred hhHHHHHHHHHhhc---CCc------hhHHHHH-HHHH-hhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC------C
Q 000993 617 DMYSLGIVFFELWH---PFS------TAMERQI-VLSD-LKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP------S 679 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~------~~~~~~~-~~~~-l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP------t 679 (1196)
|+|+|||+++||+. ||. +..+.+. ..+. +....++|.+. +-.+..+++..|++||.+|. .
T Consensus 433 dwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprsl---svkas~vlkgflnkdp~erlgc~~~~g 509 (593)
T KOG0695|consen 433 DWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSL---SVKASHVLKGFLNKDPKERLGCRPQTG 509 (593)
T ss_pred hHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccccccee---ehhhHHHHHHhhcCCcHHhcCCCcccc
Confidence 99999999999994 875 1222222 2233 33333344433 33677899999999999996 4
Q ss_pred HHHHHhccCCCCchHHHHHH
Q 000993 680 ATELLQDALPPQMEYELLDN 699 (1196)
Q Consensus 680 a~eiL~~~~~~~~~~~~~~~ 699 (1196)
+.++-.|+||..+.|+.+..
T Consensus 510 ~~dik~h~ffr~idwd~leq 529 (593)
T KOG0695|consen 510 FSDIKSHAFFRSIDWDLLEQ 529 (593)
T ss_pred hhhhhcchhhhhCCHHHHhh
Confidence 88999999999999997754
|
|
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=316.19 Aligned_cols=252 Identities=25% Similarity=0.415 Sum_probs=202.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+-|...++||.|+||+||+|++..+|+.||+|++..... .......+.+|+.+++.++|||++++++++.+
T Consensus 21 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 92 (313)
T cd06633 21 EIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLK-------- 92 (313)
T ss_pred HHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe--------
Confidence 346667889999999999999999999999999875433 22344578899999999999999999988743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....|++||||++++.+++.. ...+++.+++.++.||+.||+|||++
T Consensus 93 --------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~ 140 (313)
T cd06633 93 --------------------------------EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH 140 (313)
T ss_pred --------------------------------CCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 356799999999998888765 45689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--CCCCCCcc
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 616 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~s~ks 616 (1196)
|++||||||+||+++.++.+||+|||++.... ......|+..|+|||++.. ...++.++
T Consensus 141 gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~s 201 (313)
T cd06633 141 NMIHRDIKAGNILLTEPGQVKLADFGSASKSS-------------------PANSFVGTPYWMAPEVILAMDEGQYDGKV 201 (313)
T ss_pred CeecCCCChhhEEECCCCCEEEeecCCCcccC-------------------CCCCccccccccChhhccccCCCCCCchh
Confidence 99999999999999999999999999885321 1123468899999999852 24588899
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|||||||++|+|++ ||............... ..+. .....+..+++|+.+||+.+|.+||++.++++|+|+...
T Consensus 202 Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~ 279 (313)
T cd06633 202 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--DSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRD 279 (313)
T ss_pred hHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCC
Confidence 99999999999996 66655443333333221 1221 122344578999999999999999999999999999875
Q ss_pred h
Q 000993 693 E 693 (1196)
Q Consensus 693 ~ 693 (1196)
.
T Consensus 280 ~ 280 (313)
T cd06633 280 R 280 (313)
T ss_pred c
Confidence 4
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-33 Score=348.25 Aligned_cols=149 Identities=30% Similarity=0.563 Sum_probs=133.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+++|.++++||+|+||+||+|.+..+++.||||+++.... .......+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~------- 75 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQS------- 75 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEE-------
Confidence 5789999999999999999999999999999999975432 23344678899999999999999999977632
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
..++|+|||||. ++|.+++...+.+++..++.++.||+.||+|||+
T Consensus 76 ---------------------------------~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~ 122 (669)
T cd05610 76 ---------------------------------ANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHR 122 (669)
T ss_pred ---------------------------------CCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 357899999996 5999999888889999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchh
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 568 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~ 568 (1196)
++|+||||||+||||+.++.+||+|||+++.
T Consensus 123 ~gIiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 123 HGIIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred CCEEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 9999999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-33 Score=317.55 Aligned_cols=251 Identities=25% Similarity=0.424 Sum_probs=201.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+.|...+.||.|+||.||+|+++.+++.+|+|.+.... .......++.+|+.+++.++|||++++++++..
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 86 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-------- 86 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc--------
Confidence 45777889999999999999999999999999987532 233345678899999999999999999988743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....|+||||+.+++.+++.. ...+++..++.++.|++.||.|||++
T Consensus 87 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~ 134 (308)
T cd06634 87 --------------------------------EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 134 (308)
T ss_pred --------------------------------CCeeEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 346799999999988887754 45689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--CCCCCCcc
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 616 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~s~ks 616 (1196)
+++||||||+||+++.++.+||+|||++..... .....|++.|+|||.+.+ ...++.++
T Consensus 135 ~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~-------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 195 (308)
T cd06634 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------------------ANXFVGTPYWMAPEVILAMDEGQYDGKV 195 (308)
T ss_pred CcccCCCCHHhEEECCCCcEEECCcccceeecC-------------------cccccCCccccCHHHHhhcccCCCCccc
Confidence 999999999999999999999999999875321 123468889999999753 23578899
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|||||||++|+|++ ||.............. ...+. .....+..+.+||++||+.+|.+||++.++++|+|+...
T Consensus 196 Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 196 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQ--NESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred chHHHHHHHHHHHcCCCCCccccHHHHHHHHhh--cCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence 99999999999996 6655443333322222 12222 122345678999999999999999999999999998774
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-33 Score=307.89 Aligned_cols=244 Identities=23% Similarity=0.324 Sum_probs=194.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||+|+||.||+|.+. +++.||+|.++.... ....+.+|+.+++.++||||+++++++..
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 72 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM---DPKDFLAEAQIMKKLRHPKLIQLYAVCTL--------- 72 (261)
T ss_pred hheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc---cHHHHHHHHHHHHHCCCCCccceeEEEec---------
Confidence 57899999999999999999976 567899999864332 24568899999999999999999987632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHh
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|++|||++ ++|.+++.... .+++..+..++.|++.||.|||+
T Consensus 73 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~ 121 (261)
T cd05068 73 -------------------------------EEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEA 121 (261)
T ss_pred -------------------------------CCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 345799999995 69999987654 68999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+||+++.++.+||+|||+++....... ........+..|+|||++.+ ..++.++|
T Consensus 122 ~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~D 186 (261)
T cd05068 122 QNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY--------------EAREGAKFPIKWTAPEAALY-NRFSIKSD 186 (261)
T ss_pred CCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc--------------cccCCCcCceeccCcccccc-CCCCchhh
Confidence 9999999999999999999999999999986531110 00112233568999999887 56899999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 618 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 618 VwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
+||||+++|||++ ||............ ..... ++.....+..+.+++.+||+.+|.+||++.++++
T Consensus 187 i~slG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 187 VWSFGILLTEIVTYGRMPYPGMTNAEVLQQV-DQGYR-MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH-HcCCC-CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 9999999999996 67655444333322 22222 2223345678999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=310.91 Aligned_cols=245 Identities=26% Similarity=0.375 Sum_probs=198.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.+|.+.++||.|+||.||+|.++. ++.+|+|++.... ......+.+|+.+++.++||||+++++.+.+
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------- 73 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDD--LLKQQDFQKEVQALKRLRHKHLISLFAVCSV--------- 73 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccc--hhhHHHHHHHHHHHhcCCCcchhheeeeEec---------
Confidence 578999999999999999999986 8999999986433 2235678899999999999999999987632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....|++|||+++ +|.+++... ..+++..++.++.||+.||+|||+
T Consensus 74 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~ 122 (261)
T cd05148 74 -------------------------------GEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEE 122 (261)
T ss_pred -------------------------------CCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3457999999974 999998753 458999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+||+++.++.+||+|||++....... .......++..|+|||++.+ ..++.++|
T Consensus 123 ~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~---------------~~~~~~~~~~~~~~PE~~~~-~~~~~~~D 186 (261)
T cd05148 123 QNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV---------------YLSSDKKIPYKWTAPEAASH-GTFSTKSD 186 (261)
T ss_pred CCeeccccCcceEEEcCCceEEEccccchhhcCCcc---------------ccccCCCCceEecCHHHHcc-CCCCchhh
Confidence 999999999999999999999999999997653211 01123346778999999887 56899999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 618 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 618 VwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||||+++|+|++ ||......+...... ....++.....++.+.++|.+||+.||.+|||+.++++.
T Consensus 187 iwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~ 257 (261)
T cd05148 187 VWSFGILLYEMFTYGQVPYPGMNNHEVYDQIT--AGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREE 257 (261)
T ss_pred HHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH--hCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 9999999999985 676555444433332 222233344567789999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-33 Score=312.31 Aligned_cols=250 Identities=31% Similarity=0.472 Sum_probs=196.3
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCccccCCCC
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
|.+.+.||.|+||+||+|+...+++.||||.+...... .......+|+..++.++ ||||+++++++..
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~---------- 69 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNEHPNIVKLKEVFRE---------- 69 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc-hhHHHHHHHHHHHHhccCCCCchhHHHHhhc----------
Confidence 67789999999999999999988999999998654332 22334567999999999 9999999987632
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
....|+||||++++|.+.+.... .+++..+..++.|++.+|.|||++|
T Consensus 70 ------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~ 119 (283)
T cd07830 70 ------------------------------NDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG 119 (283)
T ss_pred ------------------------------CCcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 34679999999889999887764 7899999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
++|+||+|+||+++.++.++|+|||+++...... ..+...++..|+|||++.+...++.++|+|
T Consensus 120 i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~----------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~ 183 (283)
T cd07830 120 FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP----------------PYTDYVSTRWYRAPEILLRSTSYSSPVDIW 183 (283)
T ss_pred cccCCCChhhEEEcCCCCEEEeecccceeccCCC----------------CcCCCCCcccccCceeeecCcCcCCccchh
Confidence 9999999999999999999999999987542110 112346889999999986655689999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhc-------------------CCCC--------CccccCCHHHHHHHHHc
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQK-------------------GELP--------PSWVAKFSEQESLLRRL 669 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~-------------------~~~p--------~~~~~~~~~l~~LI~~c 669 (1196)
|||+++|||++ ||................ ...+ ......++.+.++|++|
T Consensus 184 s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 263 (283)
T cd07830 184 ALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDM 263 (283)
T ss_pred hHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHh
Confidence 99999999997 554332222111111000 0000 01112246789999999
Q ss_pred ccCCCCCCCCHHHHHhccCC
Q 000993 670 MSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 670 L~~dP~~RPta~eiL~~~~~ 689 (1196)
|+.||.+|||+.+++.|+||
T Consensus 264 l~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 264 LRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred cccCcccCCCHHHHhhCCCC
Confidence 99999999999999999996
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=311.64 Aligned_cols=252 Identities=28% Similarity=0.442 Sum_probs=192.7
Q ss_pred CCceEEeeeccCCcEEEEEEEE----ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKN----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~----~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
.+|++++.||+|+||.||+|.. ..++..||+|.+... .......+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---- 77 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS--TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---- 77 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccC----
Confidence 5789999999999999999984 457889999988643 334456788999999999999999999876321
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+++||||++ ++|.+++... ..+++..++.++.||+.||+|
T Consensus 78 ----------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~ 123 (284)
T cd05081 78 ----------------------------------GRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEY 123 (284)
T ss_pred ----------------------------------CCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHH
Confidence 1245799999996 5999998754 468999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+||+++.++.+||+|||+++........ ........++..|+|||++.+ ..++.
T Consensus 124 LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~ 190 (284)
T cd05081 124 LGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEY------------YKVREPGESPIFWYAPESLTE-SKFSV 190 (284)
T ss_pred HHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCcc------------eeecCCCCCceEeeCHHHhcc-CCcCh
Confidence 99999999999999999999999999999999865321100 000112234557999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHH---------------HHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQ---------------IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 676 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~---------------~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~ 676 (1196)
++|||||||++|||++ |+....... .....+. ....++.....+.++.+||.+||+.+|++
T Consensus 191 ~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~ 269 (284)
T cd05081 191 ASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLK-NNGRLPAPPGCPAEIYAIMKECWNNDPSQ 269 (284)
T ss_pred HHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHh-cCCcCCCCCCCCHHHHHHHHHHccCChhh
Confidence 9999999999999986 221110000 0011111 22222333445678999999999999999
Q ss_pred CCCHHHHHhc
Q 000993 677 RPSATELLQD 686 (1196)
Q Consensus 677 RPta~eiL~~ 686 (1196)
|||+.++++.
T Consensus 270 Rpt~~ei~~~ 279 (284)
T cd05081 270 RPSFSELALQ 279 (284)
T ss_pred CCCHHHHHHH
Confidence 9999999864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-33 Score=316.50 Aligned_cols=251 Identities=22% Similarity=0.289 Sum_probs=196.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~ 453 (1196)
.++|.+.+.||+|+||.||+|.+. .++..||+|+++... .....+.+.+|+.+++++ +||||+++++++..
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-- 110 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA-HSSEREALMSELKIMSHLGNHENIVNLLGACTI-- 110 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC-ChHHHHHHHHHHHHHHhccCCCCcceEEEEEec--
Confidence 468999999999999999999863 345689999886433 233456789999999999 89999999988732
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVE 530 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~ 530 (1196)
...+|++|||++ ++|.+++.... .+++.++..++.||+.
T Consensus 111 --------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~ 152 (302)
T cd05055 111 --------------------------------------GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAK 152 (302)
T ss_pred --------------------------------------CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 235799999997 69999987543 3899999999999999
Q ss_pred HHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC
Q 000993 531 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610 (1196)
Q Consensus 531 gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 610 (1196)
||+|||+++|+|+||||+|||++.++.+||+|||+++.+..... ........+++.|+|||.+.+ .
T Consensus 153 ~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~ 218 (302)
T cd05055 153 GMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSN-------------YVVKGNARLPVKWMAPESIFN-C 218 (302)
T ss_pred HHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccCCCc-------------eeecCCCCcccccCCHhhhcc-C
Confidence 99999999999999999999999999999999999975432110 001122346788999999887 5
Q ss_pred CCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 611 KIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++.++|||||||++|||++ ||.............. ....+......++++.+++.+||..+|++|||+.++++.
T Consensus 219 ~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~ 297 (302)
T cd05055 219 VYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIK-EGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQL 297 (302)
T ss_pred CCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHH-cCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 68999999999999999985 6654443333322222 222222233456789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-33 Score=313.21 Aligned_cols=249 Identities=20% Similarity=0.322 Sum_probs=195.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~-----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.++|++.+.||+|+||.||+|.+.. ++..||+|++... ........+.+|+.+++.++||||+++++++.+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~--- 79 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE-ASADMQADFQREAALMAEFDHPNIVKLLGVCAV--- 79 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCC-cCHHHHHHHHHHHHHHHhcCCCchheEEEEEcC---
Confidence 3689999999999999999999753 5789999988643 233445678899999999999999999987732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-------------------
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD------------------- 514 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~------------------- 514 (1196)
...+|++|||++ ++|.+++....
T Consensus 80 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 122 (288)
T cd05050 80 -------------------------------------GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGL 122 (288)
T ss_pred -------------------------------------CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccc
Confidence 345699999997 59999886431
Q ss_pred ---CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccC
Q 000993 515 ---HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG 591 (1196)
Q Consensus 515 ---~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (1196)
.+++..++.++.||+.||+|||+++++||||||+||+++.++.++|+|||+++.+...... ...
T Consensus 123 ~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~-------------~~~ 189 (288)
T cd05050 123 NPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY-------------KAS 189 (288)
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCccc-------------ccc
Confidence 3678889999999999999999999999999999999999999999999998754221100 001
Q ss_pred cCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHH
Q 000993 592 TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLR 667 (1196)
Q Consensus 592 ~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~ 667 (1196)
.....+..|+|||.+.+ ..++.++|||||||++|||++ ||......+..... . ....++.....+.++.+||.
T Consensus 190 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~l~~li~ 266 (288)
T cd05050 190 ENDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYV-R-DGNVLSCPDNCPLELYNLMR 266 (288)
T ss_pred CCCccChhhcCHHHHhc-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-h-cCCCCCCCCCCCHHHHHHHH
Confidence 12234677999999887 568999999999999999985 67655444433322 2 23333323345678999999
Q ss_pred HcccCCCCCCCCHHHHHh
Q 000993 668 RLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~ 685 (1196)
+||+.||.+|||+.++++
T Consensus 267 ~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 267 LCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHcccCcccCCCHHHHHH
Confidence 999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-33 Score=309.23 Aligned_cols=249 Identities=21% Similarity=0.336 Sum_probs=196.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.+|++.+.||+|+||.||+|.++.++. .+|+|.++... .......+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 76 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK------ 76 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec------
Confidence 578999999999999999999875543 79999886432 23345678999999999999999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|++|||++ ++|.+++... ..++..+++.++.||+.||+||
T Consensus 77 ----------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l 122 (267)
T cd05066 77 ----------------------------------SKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYL 122 (267)
T ss_pred ----------------------------------CCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 345799999997 5899998764 4689999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++|++||||||+|||++.++.++|+|||++........ .........++..|+|||.+.+ ..++.+
T Consensus 123 H~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~~pe~~~~-~~~~~~ 189 (267)
T cd05066 123 SDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE------------AAYTTRGGKIPIRWTAPEAIAY-RKFTSA 189 (267)
T ss_pred HHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccc------------eeeecCCCccceeecCHhHhcc-CccCch
Confidence 999999999999999999999999999999986532110 0011122344678999999987 568999
Q ss_pred chhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 616 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 616 sDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
+|+|||||++||+++ ||......+..... . ....++.....++.+.+++.+||+.+|.+||++.++++
T Consensus 190 ~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 190 SDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAI-E-EGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred hhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHH-h-CCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 999999999999874 66655443333222 2 22223333456678999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=308.79 Aligned_cols=253 Identities=21% Similarity=0.332 Sum_probs=197.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
..+|++.+.||+|+||.||+|.++.+++ .||||++... ........+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~----- 76 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSG-YTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK----- 76 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCcCcceEEEEECC-----
Confidence 3578999999999999999999987765 6999988643 233445689999999999999999999987632
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...++++|||++ ++|.+++... +.+++.+++.++.|++.||+|
T Consensus 77 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~ 121 (269)
T cd05065 77 -----------------------------------SRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKY 121 (269)
T ss_pred -----------------------------------CCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHH
Confidence 345789999997 4899888753 568999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++|++||||||+||+++.++.+||+|||+++......... . .........+..|+|||.+.+ ..++.
T Consensus 122 lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~--~--------~~~~~~~~~~~~y~~PE~~~~-~~~~~ 190 (269)
T cd05065 122 LSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP--T--------YTSSLGGKIPIRWTAPEAIAY-RKFTS 190 (269)
T ss_pred HHHCCEeecccChheEEEcCCCcEEECCCccccccccCcccc--c--------cccccCCCcceeecCHhHhcc-Ccccc
Confidence 999999999999999999999999999999987653221000 0 000111223568999999987 56899
Q ss_pred cchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 615 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 615 ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++|||||||++|||++ ||............ ...... +.....++.+.+++.+||..+|.+||++.++++.
T Consensus 191 ~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i-~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 264 (269)
T cd05065 191 ASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAI-EQDYRL-PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVST 264 (269)
T ss_pred hhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHH-HcCCcC-CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999999874 77655444333322 222222 2234556789999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=306.12 Aligned_cols=241 Identities=24% Similarity=0.378 Sum_probs=192.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
..+|.+.+.||+|+||.||++... |..||+|.++.. ...+.+.+|+.+++.++||||+++++++.+.
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE------- 71 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCC----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcC-------
Confidence 468999999999999999999875 888999987532 2245788999999999999999999876432
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....|++|||++ ++|.+++.... .+++..++.++.||+.||+|||
T Consensus 72 --------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH 119 (256)
T cd05082 72 --------------------------------KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 119 (256)
T ss_pred --------------------------------CCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 245799999997 59999987644 4889999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++|++||||||+||+++.++.+||+|||+++..... .....++..|+|||++.+ ..++.++
T Consensus 120 ~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~-~~~~~~~ 180 (256)
T cd05082 120 ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST------------------QDTGKLPVKWTAPEALRE-KKFSTKS 180 (256)
T ss_pred hCCEeccccchheEEEcCCCcEEecCCccceecccc------------------CCCCccceeecCHHHHcc-CCCCchh
Confidence 999999999999999999999999999998753211 112234568999999887 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||||||++|||++ ||............ . ....+......++.+.++|.+||+.+|.+|||+.++++.
T Consensus 181 Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~ 252 (256)
T cd05082 181 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-E-KGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQ 252 (256)
T ss_pred hhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-h-cCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 99999999999985 66544333332222 1 122222233456789999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=307.45 Aligned_cols=243 Identities=23% Similarity=0.326 Sum_probs=192.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.++||+|+||.||+|++..+ ..||+|+++.... ....+.+|+.+++.++||||+++++.+.
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~---------- 71 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVS---------- 71 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc---CHHHHHHHHHHHHhCCCCCcceEEEEEC----------
Confidence 5799999999999999999998755 4699999874332 2356889999999999999999987651
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....|++|||++ ++|.+++... ..+++..++.++.|++.||+|||+
T Consensus 72 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~ 120 (262)
T cd05071 72 -------------------------------EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 120 (262)
T ss_pred -------------------------------CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 123589999997 5999998753 358899999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
.+++||||||+||+++.++.+||+|||.++.+..... .......++..|+|||++.+ ..++.++|
T Consensus 121 ~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~~PE~~~~-~~~~~~~D 185 (262)
T cd05071 121 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY--------------TARQGAKFPIKWTAPEAALY-GRFTIKSD 185 (262)
T ss_pred CCccccccCcccEEEcCCCcEEeccCCceeecccccc--------------ccccCCcccceecCHhHhcc-CCCCchhh
Confidence 9999999999999999999999999999976532210 00112346778999999876 56899999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 618 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 618 VwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
||||||++|||++ ||.............. .. .++.....+..+.+++.+||+.||.+||++.++++
T Consensus 186 vwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 186 VWSFGILLTELTTKGRVPYPGMVNREVLDQVER-GY-RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhc-CC-CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 9999999999997 6765544443332221 21 22223445678999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=312.71 Aligned_cols=248 Identities=23% Similarity=0.356 Sum_probs=195.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.+|.+.+.||+|+||.||+|.+. .++..+++|.+.. ........+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 78 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKD--PTLAARKDFQREAELLTNLQHEHIVKFYGVCGD---- 78 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCC--ccHHHHHHHHHHHHHHhcCCCCCcceEEEEEcc----
Confidence 57899999999999999999864 2456789998753 233344678899999999999999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----------------CCCH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HFDK 518 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l~e 518 (1196)
....++||||++ ++|.+++.... .+++
T Consensus 79 ------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 122 (291)
T cd05094 79 ------------------------------------GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGL 122 (291)
T ss_pred ------------------------------------CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCH
Confidence 345799999996 59999986532 3788
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccc
Q 000993 519 ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTY 598 (1196)
Q Consensus 519 ~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~ 598 (1196)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... ........+++
T Consensus 123 ~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~-------------~~~~~~~~~~~ 189 (291)
T cd05094 123 SQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY-------------YRVGGHTMLPI 189 (291)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCce-------------eecCCCCCcce
Confidence 99999999999999999999999999999999999999999999999975432110 01122345788
Q ss_pred cCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCC
Q 000993 599 FYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 674 (1196)
Q Consensus 599 ~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP 674 (1196)
.|+|||++.+ ..++.++|||||||++|||++ ||......+..... . ....+......+..+.+++.+||+.||
T Consensus 190 ~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~P 266 (291)
T cd05094 190 RWMPPESIMY-RKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI-T-QGRVLERPRVCPKEVYDIMLGCWQREP 266 (291)
T ss_pred eecChHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-h-CCCCCCCCccCCHHHHHHHHHHcccCh
Confidence 9999999887 568999999999999999986 66554444333222 1 233333333456789999999999999
Q ss_pred CCCCCHHHHHhc
Q 000993 675 SDRPSATELLQD 686 (1196)
Q Consensus 675 ~~RPta~eiL~~ 686 (1196)
.+|||+.++++.
T Consensus 267 ~~Rpt~~~v~~~ 278 (291)
T cd05094 267 QQRLNIKEIYKI 278 (291)
T ss_pred hhCcCHHHHHHH
Confidence 999999999863
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=306.87 Aligned_cols=250 Identities=21% Similarity=0.324 Sum_probs=196.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
++|+..+.||+|+||.||+|+++.++. .+|+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 77 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY-TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTK------ 77 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEcc------
Confidence 578889999999999999999986665 79999886432 23345678899999999999999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
....|++|||++ ++|.+++... ..+++.++..++.|++.||+||
T Consensus 78 ----------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~l 123 (268)
T cd05063 78 ----------------------------------FKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYL 123 (268)
T ss_pred ----------------------------------CCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 345789999997 4898888754 5689999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|+.|++||||||+||+++.++.+||+|||++........ ..........++.|+|||++.+ ..++.+
T Consensus 124 H~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~~PE~~~~-~~~~~~ 190 (268)
T cd05063 124 SDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPE------------GTYTTSGGKIPIRWTAPEAIAY-RKFTSA 190 (268)
T ss_pred HHCCeeccccchhhEEEcCCCcEEECCCccceecccccc------------cceeccCCCcCceecCHHHhhc-CCcChH
Confidence 999999999999999999999999999999876432110 0011112234568999999887 568999
Q ss_pred chhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 616 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||||||++|||++ ||............ . .....+.....++.+.+++.+||+.+|.+||++.++++.
T Consensus 191 ~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i-~-~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~ 263 (268)
T cd05063 191 SDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAI-N-DGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNL 263 (268)
T ss_pred hHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHH-h-cCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 999999999999875 77654443333222 2 222333334566789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=306.46 Aligned_cols=244 Identities=25% Similarity=0.358 Sum_probs=193.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|.+. ++..+|+|.+...... ...+.+|+.+++.++||||+++++.+.
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~--------- 71 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMS---PESFLEEAQIMKKLRHDKLVQLYAVVS--------- 71 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCC---HHHHHHHHHHHHhcCCCceEEEEeEEC---------
Confidence 368899999999999999999876 6677999998754332 356889999999999999999987651
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....|++|||++ ++|.+++... ..+++..++.++.|++.||+|||
T Consensus 72 --------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH 119 (260)
T cd05070 72 --------------------------------EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE 119 (260)
T ss_pred --------------------------------CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 123589999997 5999988753 35899999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++|++||||||+||+++.++.++|+|||++........ .......++..|+|||.+.+ ..++.++
T Consensus 120 ~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 184 (260)
T cd05070 120 RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY--------------TARQGAKFPIKWTAPEAALY-GRFTIKS 184 (260)
T ss_pred HCCcccCCCccceEEEeCCceEEeCCceeeeeccCccc--------------ccccCCCCCccccChHHHhc-CCCcchh
Confidence 99999999999999999999999999999976432110 01112345678999999876 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
|+||||+++|+|++ ||......+..... . ....++.....+..+.+|+.+||..+|.+|||+.+++.
T Consensus 185 Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 185 DVWSFGILLTELVTKGRVPYPGMNNREVLEQV-E-RGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH-H-cCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 99999999999986 66554443333322 2 22222333455678999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-33 Score=318.00 Aligned_cols=258 Identities=22% Similarity=0.306 Sum_probs=194.5
Q ss_pred eeccC--CcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCC
Q 000993 388 PLGHG--GFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 465 (1196)
Q Consensus 388 ~LG~G--~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 465 (1196)
+||+| ++|.||+++++.+++.||||+++...........+.+|+.+++.++||||++++++|.+
T Consensus 5 ~i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~-------------- 70 (314)
T cd08216 5 LIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIV-------------- 70 (314)
T ss_pred hhhHhhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeec--------------
Confidence 34444 55667777777789999999998664455566789999999999999999999988743
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCcc
Q 000993 466 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGIIH 542 (1196)
Q Consensus 466 g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs~gIiH 542 (1196)
....|++||||+ ++|.+++... ..+++..+..++.||+.||+|||+++|+|
T Consensus 71 --------------------------~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH 124 (314)
T cd08216 71 --------------------------DSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIH 124 (314)
T ss_pred --------------------------CCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 345799999997 5898888753 45899999999999999999999999999
Q ss_pred cCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC-CCCCCcchhHHH
Q 000993 543 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYSL 621 (1196)
Q Consensus 543 rDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~s~ksDVwSl 621 (1196)
|||||+||+++.++.+||+|||.+..+........ ..........++..|+|||++.+. ..++.++|||||
T Consensus 125 ~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~ 196 (314)
T cd08216 125 RSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR--------VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSV 196 (314)
T ss_pred CCCCcceEEEecCCceEEecCccceeecccccccc--------ccccccccccccccccCHHHhcCCCCCCCcchhHHHH
Confidence 99999999999999999999999876532211100 001112334678899999998763 348899999999
Q ss_pred HHHHHHhhc---CCchhHHHHHHHHHhhhcC-------CCCC------------------------ccccCCHHHHHHHH
Q 000993 622 GIVFFELWH---PFSTAMERQIVLSDLKQKG-------ELPP------------------------SWVAKFSEQESLLR 667 (1196)
Q Consensus 622 GviLyELlt---Pf~~~~~~~~~~~~l~~~~-------~~p~------------------------~~~~~~~~l~~LI~ 667 (1196)
||++|||++ ||................. ..+. .....+.++.+|+.
T Consensus 197 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 276 (314)
T cd08216 197 GITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVE 276 (314)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHH
Confidence 999999996 7775544333222221100 0000 00011246789999
Q ss_pred HcccCCCCCCCCHHHHHhccCCCCch
Q 000993 668 RLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
+||+.||++|||+.++++|+||.++.
T Consensus 277 ~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 277 LCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred HHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 99999999999999999999998663
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=314.86 Aligned_cols=249 Identities=22% Similarity=0.350 Sum_probs=194.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-------CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeec
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKL-------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFET 452 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~-------~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~ 452 (1196)
++|.+.+.||+|+||.||+|++.. ++..+|+|.++.. .......++.+|+.+++.+ +||||+++++++..
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~- 95 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ- 95 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCC-CChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-
Confidence 689999999999999999998753 2357999988743 2333456788999999999 79999999988732
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----------------C
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------H 515 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~ 515 (1196)
...+|+||||++ ++|.+++.... .
T Consensus 96 ---------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~ 136 (307)
T cd05098 96 ---------------------------------------DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQ 136 (307)
T ss_pred ---------------------------------------CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCcccc
Confidence 345799999997 59999997532 4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcc
Q 000993 516 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 595 (1196)
Q Consensus 516 l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (1196)
++..+++.++.||+.||+|||++|++||||||+||+++.++.+||+|||+++........ .......
T Consensus 137 l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~-------------~~~~~~~ 203 (307)
T cd05098 137 LSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY-------------KKTTNGR 203 (307)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCcccccccccchh-------------hccccCC
Confidence 788899999999999999999999999999999999999999999999998754321100 0112233
Q ss_pred ccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccc
Q 000993 596 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 671 (1196)
Q Consensus 596 GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~ 671 (1196)
+++.|+|||++.+ ..++.++|||||||++|||++ ||......+ ....+. ....++.....+.++.+||.+||.
T Consensus 204 ~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~ 280 (307)
T cd05098 204 LPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-LFKLLK-EGHRMDKPSNCTNELYMMMRDCWH 280 (307)
T ss_pred CccceeChHHhcc-CCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHH-HHHHHH-cCCCCCCCCcCCHHHHHHHHHHcc
Confidence 5678999999987 568999999999999999985 665433322 222222 222223334456789999999999
Q ss_pred CCCCCCCCHHHHHhc
Q 000993 672 PSPSDRPSATELLQD 686 (1196)
Q Consensus 672 ~dP~~RPta~eiL~~ 686 (1196)
.+|.+|||+.+++++
T Consensus 281 ~~p~~Rps~~evl~~ 295 (307)
T cd05098 281 AVPSQRPTFKQLVED 295 (307)
T ss_pred cChhhCcCHHHHHHH
Confidence 999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-33 Score=328.33 Aligned_cols=250 Identities=20% Similarity=0.309 Sum_probs=195.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGV 454 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~ 454 (1196)
++|.+.++||+|+||.||+|++. .++..||+|+++.... ....+.+.+|+.+|..+. |||||+++++|..
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~--- 112 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR-SSEKQALMSELKIMSHLGPHLNIVNLLGACTK--- 112 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC-hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc---
Confidence 57888899999999999999964 3456899999975432 233457889999999997 9999999998833
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-------------------
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD------------------- 514 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~------------------- 514 (1196)
...+|+|||||+ |+|.++++...
T Consensus 113 -------------------------------------~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 155 (401)
T cd05107 113 -------------------------------------GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLIS 155 (401)
T ss_pred -------------------------------------CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccc
Confidence 235799999996 59999886431
Q ss_pred -------------------------------------------------------------------------------C
Q 000993 515 -------------------------------------------------------------------------------H 515 (1196)
Q Consensus 515 -------------------------------------------------------------------------------~ 515 (1196)
.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (401)
T cd05107 156 GGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPA 235 (401)
T ss_pred cccccccccccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCC
Confidence 2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcc
Q 000993 516 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 595 (1196)
Q Consensus 516 l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (1196)
++...++.++.||+.||+|||+.+++||||||+|||++.++.+||+|||+++.+..... ........
T Consensus 236 l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~-------------~~~~~~~~ 302 (401)
T cd05107 236 LSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSN-------------YISKGSTF 302 (401)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceecccccc-------------cccCCCcC
Confidence 56677889999999999999999999999999999999999999999999976422110 00112345
Q ss_pred ccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccc
Q 000993 596 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 671 (1196)
Q Consensus 596 GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~ 671 (1196)
+++.|+|||.+.+ ..++.++|||||||++|||++ ||......+.....+. ....++.+...+.++.+|+.+||.
T Consensus 303 ~~~~y~aPE~~~~-~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~l~~li~~cl~ 380 (401)
T cd05107 303 LPLKWMAPESIFN-NLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIK-RGYRMAKPAHASDEIYEIMQKCWE 380 (401)
T ss_pred CCCceeChHHhcC-CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHHcC
Confidence 7889999999987 568999999999999999985 6654443333333322 222233334456799999999999
Q ss_pred CCCCCCCCHHHHHhc
Q 000993 672 PSPSDRPSATELLQD 686 (1196)
Q Consensus 672 ~dP~~RPta~eiL~~ 686 (1196)
.+|.+||++.+|++.
T Consensus 381 ~~P~~RPs~~ell~~ 395 (401)
T cd05107 381 EKFEIRPDFSQLVHL 395 (401)
T ss_pred CChhHCcCHHHHHHH
Confidence 999999999999874
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=304.73 Aligned_cols=244 Identities=25% Similarity=0.377 Sum_probs=192.8
Q ss_pred eeeccCCcEEEEEEEEcc-CCc--EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcC
Q 000993 387 QPLGHGGFGHVVLCKNKL-DGR--HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 463 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~-~g~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~ 463 (1196)
+.||+|++|.||+|.+.. +++ .||||.+...... ...+.+.+|+.++++++||||+++++.+.
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------------- 66 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVL------------- 66 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEc-------------
Confidence 368999999999999865 333 6999998754433 55678999999999999999999998762
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 464 ~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
. ..++++|||++ ++|.+++.... .+++..++.++.||+.||+|||++|+
T Consensus 67 ---------------------------~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 118 (257)
T cd05040 67 ---------------------------T-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRF 118 (257)
T ss_pred ---------------------------C-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCc
Confidence 1 45799999996 69999987654 68999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+||||||+||+++.++.+||+|||+++.+..... .........++..|+|||.+.+ ..++.++||||
T Consensus 119 ~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~Di~s 185 (257)
T cd05040 119 IHRDLAARNILLASDDKVKIGDFGLMRALPQNED------------HYVMEEHLKVPFAWCAPESLRT-RTFSHASDVWM 185 (257)
T ss_pred cccccCcccEEEecCCEEEecccccccccccccc------------ceecccCCCCCceecCHHHhcc-cCcCchhhhHH
Confidence 9999999999999999999999999987532210 0011123457889999999887 56899999999
Q ss_pred HHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 621 LGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 621 lGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||++|||++ ||......+....... .....+.....+..+.+++.+||+.+|.+||++.++++.
T Consensus 186 lG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~ 254 (257)
T cd05040 186 FGVTLWEMFTYGEEPWAGLSGSQILKKIDK-EGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREF 254 (257)
T ss_pred HHHHHHHHHhCCCCCCCCCCHHHHHHHHHh-cCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHH
Confidence 9999999986 7755444443333222 222222223456789999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=314.46 Aligned_cols=250 Identities=22% Similarity=0.345 Sum_probs=194.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-------cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeee
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK-------LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFE 451 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~-------~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e 451 (1196)
.++|.+.+.||+|+||.||+|++. .++..||+|.+... ........+.+|+.+++.+ +||||+++++++..
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc-cchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 468899999999999999999863 23457999987632 2234456789999999999 89999999988732
Q ss_pred cCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------------C
Q 000993 452 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------D 514 (1196)
Q Consensus 452 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~ 514 (1196)
...+|++|||++ ++|.+++... .
T Consensus 93 ----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~ 132 (304)
T cd05101 93 ----------------------------------------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDE 132 (304)
T ss_pred ----------------------------------------CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcc
Confidence 345799999997 5999998753 2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCc
Q 000993 515 HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 594 (1196)
Q Consensus 515 ~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (1196)
.++...+..++.||+.||+|||++|++||||||+||+++.++.+||+|||+++....... .......
T Consensus 133 ~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~-------------~~~~~~~ 199 (304)
T cd05101 133 QMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDY-------------YKKTTNG 199 (304)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceecccccc-------------cccccCC
Confidence 467788999999999999999999999999999999999999999999999976532110 0112233
Q ss_pred cccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 000993 595 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 670 (1196)
Q Consensus 595 ~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL 670 (1196)
.+++.|+|||++.+ ..++.++||||||+++|+|++ ||......+.. ..+... ..+......+..+.+|+.+||
T Consensus 200 ~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~li~~cl 276 (304)
T cd05101 200 RLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF-KLLKEG-HRMDKPANCTNELYMMMRDCW 276 (304)
T ss_pred CCCceeeCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHH-HHHHcC-CcCCCCCCCCHHHHHHHHHHc
Confidence 56788999999987 568999999999999999986 55444333332 222222 222223456678999999999
Q ss_pred cCCCCCCCCHHHHHhc
Q 000993 671 SPSPSDRPSATELLQD 686 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~ 686 (1196)
..+|.+|||+.++++.
T Consensus 277 ~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 277 HAIPSHRPTFKQLVED 292 (304)
T ss_pred ccChhhCCCHHHHHHH
Confidence 9999999999999975
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=312.81 Aligned_cols=250 Identities=22% Similarity=0.308 Sum_probs=191.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc----------------CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeee
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKL----------------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 444 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~----------------~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~ 444 (1196)
++|++.+.||+|+||.||+|.+.. ++..+|+|++... .......++.+|+.+++.++||||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRED-ANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 578999999999999999986542 3457999988643 23334567899999999999999999
Q ss_pred eeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC---------
Q 000993 445 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--------- 514 (1196)
Q Consensus 445 l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--------- 514 (1196)
+++++.. ...+|++|||++ ++|.+++....
T Consensus 84 ~~~~~~~----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 123 (296)
T cd05095 84 LLAVCIT----------------------------------------SDPLCMITEYMENGDLNQFLSRHEPQEAAEKAD 123 (296)
T ss_pred EEEEEec----------------------------------------CCccEEEEEeCCCCcHHHHHHhcCccccccccc
Confidence 9988733 234699999996 59999886532
Q ss_pred --CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCc
Q 000993 515 --HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGT 592 (1196)
Q Consensus 515 --~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (1196)
.+++..++.++.||+.||+|||++|++||||||+|||++.++.++|+|||+++.+..... .....
T Consensus 124 ~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-------------~~~~~ 190 (296)
T cd05095 124 VVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDY-------------YRIQG 190 (296)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCCCEEeccCcccccccCCcc-------------eeccC
Confidence 366788999999999999999999999999999999999999999999999975432110 00111
Q ss_pred CccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc-----CCchhHHHHHHHHHh---hh--cCCCCCccccCCHHH
Q 000993 593 GQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH-----PFSTAMERQIVLSDL---KQ--KGELPPSWVAKFSEQ 662 (1196)
Q Consensus 593 ~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt-----Pf~~~~~~~~~~~~l---~~--~~~~p~~~~~~~~~l 662 (1196)
...+++.|+|||...+ ..++.++|+|||||++|||++ ||......+...... .. .....+.....++.+
T Consensus 191 ~~~~~~~~~~pe~~~~-~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (296)
T cd05095 191 RAVLPIRWMSWESILL-GKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSL 269 (296)
T ss_pred cCcCccccCCHHHHhc-CCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHH
Confidence 2345678999998776 568999999999999999985 675544333222110 00 111122233455789
Q ss_pred HHHHHHcccCCCCCCCCHHHHHh
Q 000993 663 ESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 663 ~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
.+|+.+||+.||.+||++.+|++
T Consensus 270 ~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 270 YKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHcCCCcccCCCHHHHHH
Confidence 99999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=310.27 Aligned_cols=247 Identities=23% Similarity=0.334 Sum_probs=194.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.+|.+.++||+|+||.||+|... .++..+|+|.+.. ........+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 78 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE--ASESARQDFQREAELLTVLQHQHIVRFYGVCTE---- 78 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCc--CCHHHHHHHHHHHHHHhcCCCCCCceEEEEEec----
Confidence 57888999999999999999753 3467899998753 333455689999999999999999999987732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC---------------CCCHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---------------HFDKE 519 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---------------~l~e~ 519 (1196)
....|++|||++ ++|.+++.... .+++.
T Consensus 79 ------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~ 122 (280)
T cd05092 79 ------------------------------------GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLG 122 (280)
T ss_pred ------------------------------------CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHH
Confidence 345799999997 59999886542 47889
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcccccc
Q 000993 520 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 599 (1196)
Q Consensus 520 ~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 599 (1196)
.++.++.||+.||+|||++|++||||||+|||+++++.+||+|||+++....... ........+++.
T Consensus 123 ~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~-------------~~~~~~~~~~~~ 189 (280)
T cd05092 123 QMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY-------------YRVGGRTMLPIR 189 (280)
T ss_pred HHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCce-------------eecCCCcccccc
Confidence 9999999999999999999999999999999999999999999999975421110 011122346788
Q ss_pred CCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCC
Q 000993 600 YTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 675 (1196)
Q Consensus 600 Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~ 675 (1196)
|+|||.+.+ ..++.++|||||||++|||++ ||............. ....+......++.+.++|.+||+.||.
T Consensus 190 y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~cl~~~P~ 266 (280)
T cd05092 190 WMPPESILY-RKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECIT--QGRELERPRTCPPEVYAIMQGCWQREPQ 266 (280)
T ss_pred ccCHHHhcc-CCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHH--cCccCCCCCCCCHHHHHHHHHHccCChh
Confidence 999999887 568999999999999999985 665444433332222 2222233345677899999999999999
Q ss_pred CCCCHHHHHh
Q 000993 676 DRPSATELLQ 685 (1196)
Q Consensus 676 ~RPta~eiL~ 685 (1196)
+||++.++++
T Consensus 267 ~Rp~~~~l~~ 276 (280)
T cd05092 267 QRMVIKDIHS 276 (280)
T ss_pred hCCCHHHHHH
Confidence 9999999985
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-34 Score=297.35 Aligned_cols=263 Identities=24% Similarity=0.352 Sum_probs=200.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
-++|.+.+.||+|||+.||++++..++..||+|++.... .+..+..++|+...++++|||++++++..+...
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~------ 91 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREE------ 91 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhh------
Confidence 468999999999999999999999999999999997654 356778999999999999999999987653321
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----CCCCHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----~~l~e~~~~~i~~qIa~gL~y 534 (1196)
.......||++.|.. |+|.+.++.. ..+++.+++.++.+|++||++
T Consensus 92 -----------------------------~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~ 142 (302)
T KOG2345|consen 92 -----------------------------KDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEA 142 (302)
T ss_pred -----------------------------ccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHH
Confidence 012456899999985 7999988643 469999999999999999999
Q ss_pred HHhCC--CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC--C
Q 000993 535 IHGQG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--P 610 (1196)
Q Consensus 535 LHs~g--IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~ 610 (1196)
||+.. ++||||||.|||+.+++.++|.|||.++.....-..+.... .--+......|..|.|||.+.-+ .
T Consensus 143 lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~------~lQe~a~e~Ct~pyRAPELf~vk~~~ 216 (302)
T KOG2345|consen 143 LHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQAL------RLQEWAEERCTIPYRAPELFNVKSHC 216 (302)
T ss_pred HhccCCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHH------HHHHHHHHhCCCcccCchheecccCc
Confidence 99998 99999999999999999999999999985421110000000 00011233567889999987642 3
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcC--CCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG--ELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~--~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
..+.++|||||||+||+|+. ||......-..+.....++ .+|.. ...+..+.++|+.||+.||.+||++.+++.
T Consensus 217 ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~-~~yse~l~~lik~mlqvdP~qRP~i~~ll~ 295 (302)
T KOG2345|consen 217 TITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNS-SRYSEALHQLIKSMLQVDPNQRPTIPELLS 295 (302)
T ss_pred ccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCC-CCccHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 47899999999999999984 8865443211111111122 23332 236678899999999999999999999987
Q ss_pred c
Q 000993 686 D 686 (1196)
Q Consensus 686 ~ 686 (1196)
+
T Consensus 296 ~ 296 (302)
T KOG2345|consen 296 K 296 (302)
T ss_pred H
Confidence 5
|
|
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=303.71 Aligned_cols=241 Identities=23% Similarity=0.368 Sum_probs=195.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||.|+||.||+|... |+.||+|.+..... ...++.+|+.+++.++||||+++++.+..
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------- 71 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQ-------- 71 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcC--------
Confidence 468899999999999999999875 89999999864322 45678999999999999999999988632
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....|+||||++ ++|.+++.... .+++..++.++.|++.||+|||
T Consensus 72 --------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh 119 (256)
T cd05039 72 --------------------------------GNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE 119 (256)
T ss_pred --------------------------------CCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345799999997 59999997665 6999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++|++||||||+||+++.++.+||+|||+++...... ....++..|+|||++.+ ..++.++
T Consensus 120 ~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~------------------~~~~~~~~~~ape~~~~-~~~~~~~ 180 (256)
T cd05039 120 EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ------------------DSGKLPVKWTAPEALRE-KKFSTKS 180 (256)
T ss_pred hCCccchhcccceEEEeCCCCEEEccccccccccccc------------------ccCCCcccccCchhhcC-CcCCcHH
Confidence 9999999999999999999999999999997642111 12234567999999876 5688999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||||||+++|||++ ||.......... .+... ..+......++.+.++|++||..+|.+||++.++++.
T Consensus 181 Di~slG~il~~l~~~g~~p~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 252 (256)
T cd05039 181 DVWSFGILLWEIYSFGRVPYPRIPLKDVVP-HVEKG-YRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQ 252 (256)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCCHHHHHH-HHhcC-CCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 99999999999985 665554333322 22211 1222223456789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=304.76 Aligned_cols=244 Identities=26% Similarity=0.369 Sum_probs=194.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|+++++||.|+||.||+|..+ +++.||+|.+..... ...++.+|+.+++.++||||+++++.+.
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------- 71 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM---SPEAFLAEANLMKQLQHPRLVRLYAVVT--------- 71 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC---cHHHHHHHHHHHHhcCCcCeeeEEEEEc---------
Confidence 368999999999999999999876 678899999874333 2457889999999999999999987641
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|++|||+. ++|.+++... ..+++.+++.++.|++.||+|||
T Consensus 72 --------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH 119 (260)
T cd05067 72 --------------------------------QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE 119 (260)
T ss_pred --------------------------------cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 124689999996 5999988653 46899999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++|++||||||+||+++.++.++|+|||++........ .......++..|+|||++.+ ..++.++
T Consensus 120 ~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~~pe~~~~-~~~~~~~ 184 (260)
T cd05067 120 RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY--------------TAREGAKFPIKWTAPEAINY-GTFTIKS 184 (260)
T ss_pred cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCc--------------ccccCCcccccccCHHHhcc-CCcCccc
Confidence 99999999999999999999999999999976432110 01123346788999999887 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
||||||+++|||++ ||........... +. ....++.....+.++.++|.+||+.+|.+||++++++.
T Consensus 185 Di~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 185 DVWSFGILLTEIVTYGRIPYPGMTNPEVIQN-LE-RGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred chHHHHHHHHHHHhCCCCCCCCCChHHHHHH-HH-cCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 99999999999996 7765444333222 22 22222333345678999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=326.73 Aligned_cols=337 Identities=22% Similarity=0.303 Sum_probs=235.6
Q ss_pred ccCCcccchhhhhHHHHHHHHHHhhcccCCCcccHHHHHHH--HHhcCCCC--ccccCcCCCCcccccc---hhhHHHhh
Q 000993 278 SLGQDQASQDIEKDLILVHLLRLACQSTGSLTDALPQIATE--LYNLGIFS--ERGRDLASKPSSQFNK---TFNQVFHQ 350 (1196)
Q Consensus 278 ~~~~~~~~~~~~~~l~~~~~l~~lc~~~~~~~~~~~~~~~~--l~~l~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~ 350 (1196)
.++.-+--..++.+++..-..++.+|+-|..|+..-++.+. +..+..-. ...++.++++..-..+ .|...+..
T Consensus 203 ~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l~~r~~~~~fkp~~~~e~~~~~fd~eft~ 282 (612)
T KOG0603|consen 203 ELEMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNELEARSRPPPFKPGSITERDVAQFDPEFTS 282 (612)
T ss_pred ccCCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHhhHhhcCCCCCCCCcccchhhhhhcCchhcc
Confidence 34444555578999999999999999998877544333222 12222111 1112333444332211 11111100
Q ss_pred hhccccccCCcCCCCCCC------------CCC--CCCCCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEec
Q 000993 351 KMVSSRVSQFWKPSVDSG------------SPN--MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL 416 (1196)
Q Consensus 351 ~~~s~~~~~~~~~~~~~~------------~~~--~~~~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~ 416 (1196)
..+...+....+. .+. .......+.++|++...+|.|+|+.|-.|.+..+++.+++|++..
T Consensus 283 -----~~P~dsp~~~~~~s~~~if~g~sfva~~il~~~~~~~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~ 357 (612)
T KOG0603|consen 283 -----QVPADSPLLSASGSDHTIFSGPSFVAPGVLEDAVTAPFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISK 357 (612)
T ss_pred -----CCcccCCCCCCCccccchhcCCCccChHHhhccccCCcchhhccccccCCCCccceeeeeccccccchhheeccc
Confidence 0110000000000 011 011234567899999999999999999999999999999999975
Q ss_pred CCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEE
Q 000993 417 KDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 495 (1196)
Q Consensus 417 ~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 495 (1196)
.. .+..+|+.++... +||||+++++.+. +..+.
T Consensus 358 ~~------~~~~~e~~~~~~~~~h~niv~~~~v~~----------------------------------------~~~~~ 391 (612)
T KOG0603|consen 358 RA------DDNQDEIPISLLVRDHPNIVKSHDVYE----------------------------------------DGKEI 391 (612)
T ss_pred cc------cccccccchhhhhcCCCcceeecceec----------------------------------------CCcee
Confidence 42 1234567555544 8999999998872 35678
Q ss_pred EEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEe-cCCCCeEEeccCcchhccccc
Q 000993 496 YIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF-DARNDIKIGDFGLAKFLKLEQ 573 (1196)
Q Consensus 496 ~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILl-d~~~~vKL~DFGlA~~~~~~~ 573 (1196)
|+|||++.| -+.+.+.....+. .++..|+.+|+.|+.|||++||+||||||+|||+ ++.++++|+|||.++.....
T Consensus 392 ~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~- 469 (612)
T KOG0603|consen 392 YLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS- 469 (612)
T ss_pred eeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh-
Confidence 999999975 5555555555455 7888899999999999999999999999999999 58899999999999865322
Q ss_pred cccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC
Q 000993 574 LDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE 650 (1196)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~ 650 (1196)
..+.+-|..|.|||++.. ..|++++||||||++||+|++ ||............ ..
T Consensus 470 -----------------~~tp~~t~~y~APEvl~~-~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~----i~ 527 (612)
T KOG0603|consen 470 -----------------CDTPALTLQYVAPEVLAI-QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTR----IQ 527 (612)
T ss_pred -----------------hcccchhhcccChhhhcc-CCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHh----hc
Confidence 123477899999999996 789999999999999999996 66655444222222 22
Q ss_pred CCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 651 LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 651 ~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
.++.-...+.++++||..||+.||.+||++.+++.|+|+
T Consensus 528 ~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 528 MPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred CCccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 233335678899999999999999999999999999999
|
|
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=314.17 Aligned_cols=251 Identities=24% Similarity=0.411 Sum_probs=198.9
Q ss_pred eEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcC
Q 000993 384 EELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 463 (1196)
Q Consensus 384 ~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~ 463 (1196)
....+||+|+||.||++.++.+|+.||||++... .......+.+|+.+++.++||||+++++.+..
T Consensus 23 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------------ 88 (292)
T cd06657 23 DNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR--KQQRRELLFNEVVIMRDYQHENVVEMYNSYLV------------ 88 (292)
T ss_pred hhHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc--chhHHHHHHHHHHHHHhcCCcchhheeeEEEe------------
Confidence 3346799999999999999999999999988543 22345678999999999999999999988732
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcc
Q 000993 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 542 (1196)
Q Consensus 464 ~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiH 542 (1196)
..+.|++|||+++ +|.+++. ...+++..++.++.|++.||+|||++|++|
T Consensus 89 ----------------------------~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~givH 139 (292)
T cd06657 89 ----------------------------GDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLKALSVLHAQGVIH 139 (292)
T ss_pred ----------------------------CCEEEEEEecCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 3568999999975 7877664 456899999999999999999999999999
Q ss_pred cCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHH
Q 000993 543 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622 (1196)
Q Consensus 543 rDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlG 622 (1196)
|||||+||+++.++.++|+|||++....... .......|++.|+|||.+.+ ..++.++|+||||
T Consensus 140 ~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG 203 (292)
T cd06657 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---------------PRRKSLVGTPYWMAPELISR-LPYGPEVDIWSLG 203 (292)
T ss_pred CCCCHHHEEECCCCCEEEcccccceeccccc---------------ccccccccCccccCHHHhcC-CCCCchhhHHHHH
Confidence 9999999999999999999999986542110 01223468899999999876 5678999999999
Q ss_pred HHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 623 IVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 623 viLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
+++|+|++ ||..........................++.+.+++.+||+.||.+||++.++++|+||....
T Consensus 204 vil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~ 277 (292)
T cd06657 204 IMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 277 (292)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccC
Confidence 99999996 776544333222111111111122334567899999999999999999999999999987653
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=310.50 Aligned_cols=260 Identities=26% Similarity=0.419 Sum_probs=203.9
Q ss_pred CceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCC--CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCcc
Q 000993 382 DFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~ 455 (1196)
+|++.+.||.|+||.||+|.+. .+|+.||+|+++.... .....+.+.+|+.+++.+ +||||+++++++.
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~----- 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ----- 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEee-----
Confidence 4788999999999999999985 4789999999874321 222346788899999999 6999999987762
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+|+||||++ ++|.+++.....+++..+..++.||+.||.|
T Consensus 76 -----------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~ 120 (290)
T cd05613 76 -----------------------------------TDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEH 120 (290)
T ss_pred -----------------------------------cCCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 2356899999997 5999999888889999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC-CCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKID 613 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~s 613 (1196)
||++|++||||||+|||++.++.+||+|||+++....... .......|+..|+|||.+.+. ..++
T Consensus 121 lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~~~~~~ 186 (290)
T cd05613 121 LHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV--------------ERAYSFCGTIEYMAPDIVRGGDGGHD 186 (290)
T ss_pred HHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccc--------------cccccccCCcccCChhhccCCCCCCC
Confidence 9999999999999999999999999999999975432110 111235689999999998752 2467
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHH---HHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHH
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATE 682 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~---~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~e 682 (1196)
.++||||||+++|+|++ ||..... ......... . ..++......+.+.+++++||+.||.+|| ++++
T Consensus 187 ~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~ 264 (290)
T cd05613 187 KAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRIL-K-SEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADE 264 (290)
T ss_pred ccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhh-c-cCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHH
Confidence 89999999999999997 6642211 111111111 1 11222234567889999999999999997 8999
Q ss_pred HHhccCCCCchHHHH
Q 000993 683 LLQDALPPQMEYELL 697 (1196)
Q Consensus 683 iL~~~~~~~~~~~~~ 697 (1196)
++.|+||....++.+
T Consensus 265 l~~~~~~~~~~~~~~ 279 (290)
T cd05613 265 IKKHPFFQKINWDDL 279 (290)
T ss_pred HHcCcccccCCHHHH
Confidence 999999999887544
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=307.02 Aligned_cols=249 Identities=25% Similarity=0.381 Sum_probs=196.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
++|+.++.||.|+||.||+|+++.+ .+.||+|.+.... .......+.+|+.+++.++||||+++++.+.+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 79 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK-DENLQSEFRRELDMFRKLSHKNVVRLLGLCRE---- 79 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc-chHHHHHHHHHHHHHHhcCCcceeeeEEEECC----
Confidence 5789999999999999999997643 4679999875322 22345679999999999999999999987622
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC---------CCCHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---------HFDKELAWHLF 525 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---------~l~e~~~~~i~ 525 (1196)
....|+||||++ ++|.+++.... .+++..+..++
T Consensus 80 ------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~ 123 (275)
T cd05046 80 ------------------------------------AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALC 123 (275)
T ss_pred ------------------------------------CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHH
Confidence 345699999997 69999997655 68999999999
Q ss_pred HHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchh
Q 000993 526 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 605 (1196)
Q Consensus 526 ~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 605 (1196)
.||+.||+|||+++|+||||||+||+++.++.++|+|||+++...... ........++..|+|||.
T Consensus 124 ~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~--------------~~~~~~~~~~~~y~~PE~ 189 (275)
T cd05046 124 TQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSE--------------YYKLRNALIPLRWLAPEA 189 (275)
T ss_pred HHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccccccCccc--------------ccccCCceeEEeecChhh
Confidence 999999999999999999999999999999999999999987432111 111233467788999999
Q ss_pred ccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHH
Q 000993 606 EQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT 681 (1196)
Q Consensus 606 l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ 681 (1196)
+.+ ..++.++||||||+++|+|++ ||...................+ .....+..+.+++.+||+.+|.+||++.
T Consensus 190 ~~~-~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~i~~~l~~~p~~Rp~~~ 267 (275)
T cd05046 190 VQE-DDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELP-VPEGCPSRLYKLMTRCWAVNPKDRPSFS 267 (275)
T ss_pred hcc-CCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCC-CCCCCCHHHHHHHHHHcCCCcccCCCHH
Confidence 887 467899999999999999985 7765544443333222121111 2234567899999999999999999999
Q ss_pred HHHhc
Q 000993 682 ELLQD 686 (1196)
Q Consensus 682 eiL~~ 686 (1196)
++++.
T Consensus 268 ~~l~~ 272 (275)
T cd05046 268 ELVSA 272 (275)
T ss_pred HHHHH
Confidence 99875
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=310.36 Aligned_cols=248 Identities=22% Similarity=0.302 Sum_probs=192.4
Q ss_pred CceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~-----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
+|.+.+.||+|+||.||+|.+.. ....+|+|.+... .......++.+|+.+++.++||||++++++|.+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----- 74 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKEN-ASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQ----- 74 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCC-CCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEec-----
Confidence 47788999999999999998753 2357888887633 233445678999999999999999999988732
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------------------
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY---------------------- 513 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~---------------------- 513 (1196)
....|++|||++ ++|.+++...
T Consensus 75 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (290)
T cd05045 75 -----------------------------------DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNP 119 (290)
T ss_pred -----------------------------------CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCc
Confidence 234689999997 5899887642
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccC
Q 000993 514 --DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG 591 (1196)
Q Consensus 514 --~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (1196)
..+++..++.++.|++.||+|||+++++||||||+|||+++++.+||+|||+++....... ....
T Consensus 120 ~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~-------------~~~~ 186 (290)
T cd05045 120 DERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDS-------------YVKR 186 (290)
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCccc-------------hhcc
Confidence 2478889999999999999999999999999999999999999999999999975422110 0111
Q ss_pred cCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHH
Q 000993 592 TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLR 667 (1196)
Q Consensus 592 ~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~ 667 (1196)
....++..|+|||++.+ ..++.++||||||+++|||++ ||......... .... ....++.....+.++.+++.
T Consensus 187 ~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~i~ 263 (290)
T cd05045 187 SKGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLF-NLLK-TGYRMERPENCSEEMYNLML 263 (290)
T ss_pred cCCCCCccccCHHHHcc-CCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHH-HHHh-CCCCCCCCCCCCHHHHHHHH
Confidence 22346778999999877 568999999999999999986 67654443332 2222 22222223455678999999
Q ss_pred HcccCCCCCCCCHHHHHhc
Q 000993 668 RLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~ 686 (1196)
+||+.+|.+||++.++++.
T Consensus 264 ~cl~~~P~~Rp~~~~i~~~ 282 (290)
T cd05045 264 TCWKQEPDKRPTFADISKE 282 (290)
T ss_pred HHccCCcccCCCHHHHHHH
Confidence 9999999999999999863
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=307.96 Aligned_cols=250 Identities=20% Similarity=0.267 Sum_probs=197.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKL----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
++|.+.+.||+|+||.||+|.+.. ++..|++|++.. .........+.+|+.+++.++||||+++++++.+.
T Consensus 6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~-~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~---- 80 (280)
T cd05043 6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKD-HASEIQVTLLLQESCLLYGLSHQNILPILHVCIED---- 80 (280)
T ss_pred hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccC-CCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC----
Confidence 688999999999999999999985 257899998763 33444567789999999999999999999887431
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--------CCCCHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--------DHFDKELAWHLFRQ 527 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--------~~l~e~~~~~i~~q 527 (1196)
....+++++|++ ++|.+++... ..+++..++.++.|
T Consensus 81 -----------------------------------~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~ 125 (280)
T cd05043 81 -----------------------------------GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQ 125 (280)
T ss_pred -----------------------------------CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHH
Confidence 234689999997 6999988653 45889999999999
Q ss_pred HHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 528 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 528 Ia~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
|+.||+|||+++++||||||+||+++.++.+||+|||+++.+...... .......++..|+|||++.
T Consensus 126 i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~-------------~~~~~~~~~~~y~apE~~~ 192 (280)
T cd05043 126 IACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYH-------------CLGDNENRPVKWMALESLV 192 (280)
T ss_pred HHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceE-------------EeCCCCCcchhccCHHHHh
Confidence 999999999999999999999999999999999999999764322110 0112234677899999998
Q ss_pred CCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHH
Q 000993 608 GWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 683 (1196)
Q Consensus 608 ~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ei 683 (1196)
+ ..++.++|||||||++||+++ ||.......... .+. ....++.....++++.+++.+||..||++|||+.++
T Consensus 193 ~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 269 (280)
T cd05043 193 N-KEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAA-YLK-DGYRLAQPINCPDELFAVMACCWALDPEERPSFSQL 269 (280)
T ss_pred c-CCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHH-HHH-cCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 7 568999999999999999986 776554433322 222 222223334456789999999999999999999999
Q ss_pred Hhc
Q 000993 684 LQD 686 (1196)
Q Consensus 684 L~~ 686 (1196)
++.
T Consensus 270 ~~~ 272 (280)
T cd05043 270 VQC 272 (280)
T ss_pred HHH
Confidence 863
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-32 Score=305.72 Aligned_cols=244 Identities=25% Similarity=0.391 Sum_probs=184.2
Q ss_pred eeeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~--~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
+.||+|+||.||+|.+. .++..+|+|.++.... ......+.+|+.+++.++||||+++++++.+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------------- 66 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS-VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTE------------- 66 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC-------------
Confidence 36899999999999875 3456899998865432 2334578899999999999999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-----HFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-----~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+||||++ ++|.+++.... ..++..+..++.|++.||+|||++
T Consensus 67 ---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~ 119 (269)
T cd05087 67 ---------------------------VTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN 119 (269)
T ss_pred ---------------------------CCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC
Confidence 345689999997 69999986432 356778889999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC------CC
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP------KI 612 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------~~ 612 (1196)
+++||||||+||+++.++++||+|||+++...... .........+++.|+|||++.+.. .+
T Consensus 120 ~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~-------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 186 (269)
T cd05087 120 NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKED-------------YYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQ 186 (269)
T ss_pred CEeccccCcceEEEcCCCcEEECCccccccccCcc-------------eeecCCCcCCcccccCHhHhccccccccccCC
Confidence 99999999999999999999999999986432111 011122346788999999986421 35
Q ss_pred CCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhc-CCCC--CccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 613 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQK-GELP--PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~-~~~p--~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
+.++|||||||++|||++ ||......+......... ...+ ......+..+.+++.+|+ .+|++|||+++|++
T Consensus 187 ~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 187 TKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred CccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 789999999999999985 776555444333222211 1111 112234567889999998 68999999999985
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-33 Score=310.56 Aligned_cols=235 Identities=20% Similarity=0.335 Sum_probs=183.5
Q ss_pred eeeccCCcEEEEEEEEccCCc-------EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGR-------HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~-------~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+.||.|+||.||+|.++.++. .||+|.+... .....+.+.+|+.+++.++||||+++++.+..
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-------- 70 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS--HRNYSESFFEAASMMSQLSHKHLVLNYGVCVC-------- 70 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch--hHHHHHHHHHHHHHHHhCCCCChhheeeEEEe--------
Confidence 368999999999999875544 4888877532 22345678899999999999999999988743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....++|||||+ |+|.+++.... .+++..+..++.||+.||+|||+
T Consensus 71 --------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 118 (258)
T cd05078 71 --------------------------------GDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLED 118 (258)
T ss_pred --------------------------------CCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 234689999997 58999987644 58999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCC--------eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 538 QGIIHRDLTPNNIFFDARND--------IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~--------vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
+||+||||||+||+++.++. ++++|||++..... .....+++.|+|||++.+.
T Consensus 119 ~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~-------------------~~~~~~~~~y~aPE~~~~~ 179 (258)
T cd05078 119 KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP-------------------KEILLERIPWVPPECIENP 179 (258)
T ss_pred CCeecCCCccceEEEecccccccCCCceEEecccccccccCC-------------------chhccccCCccCchhccCC
Confidence 99999999999999988765 68999998864321 1234678899999999875
Q ss_pred CCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 610 PKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
..++.++|||||||++|||++ ||....... ..........+|. ..+.++.+||.+||+.||.+|||++++++
T Consensus 180 ~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~il~ 255 (258)
T cd05078 180 QNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK-KLQFYEDRHQLPA---PKWTELANLINQCMDYEPDFRPSFRAIIR 255 (258)
T ss_pred CCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH-HHHHHHccccCCC---CCcHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 568999999999999999987 333332222 1222222223332 33468999999999999999999999987
Q ss_pred c
Q 000993 686 D 686 (1196)
Q Consensus 686 ~ 686 (1196)
.
T Consensus 256 ~ 256 (258)
T cd05078 256 D 256 (258)
T ss_pred h
Confidence 4
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=304.11 Aligned_cols=246 Identities=22% Similarity=0.285 Sum_probs=186.5
Q ss_pred eeeccCCcEEEEEEEEcc---CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcC
Q 000993 387 QPLGHGGFGHVVLCKNKL---DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 463 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~---~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~ 463 (1196)
+.||+|+||.||+|.+.. ++..+|+|.+... ........+.+|+.+++.++||||+++++.+...
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----------- 68 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI-TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPS----------- 68 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc-CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecC-----------
Confidence 368999999999999753 3457999987532 2333456788999999999999999999876321
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCc
Q 000993 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGII 541 (1196)
Q Consensus 464 ~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~gIi 541 (1196)
....|++|||+. ++|.+++... ...+...+..++.||+.||+|||+++++
T Consensus 69 ----------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 120 (262)
T cd05058 69 ----------------------------EGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFV 120 (262)
T ss_pred ----------------------------CCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 234689999996 6999998764 3467778889999999999999999999
Q ss_pred ccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHH
Q 000993 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621 (1196)
Q Consensus 542 HrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSl 621 (1196)
||||||+|||++.++.+||+|||+++......... ........+++.|+|||.+.+ ..++.++|||||
T Consensus 121 H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~-----------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~sl 188 (262)
T cd05058 121 HRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS-----------VHNHTGAKLPVKWMALESLQT-QKFTTKSDVWSF 188 (262)
T ss_pred ccccCcceEEEcCCCcEEECCccccccccCCccee-----------ecccccCcCCccccChhHhcc-CccchHHHHHHH
Confidence 99999999999999999999999997543211000 001123356788999999887 568999999999
Q ss_pred HHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 622 GIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 622 GviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||++|||++ ||........... +. ....++.....++.+.+++.+||..+|++||++.++++.
T Consensus 189 G~~l~el~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~ 255 (262)
T cd05058 189 GVLLWELMTRGAPPYPDVDSFDITVY-LL-QGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSR 255 (262)
T ss_pred HHHHHHHHcCCCCCCCCCCHHHHHHH-Hh-cCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 999999986 4443333332222 22 222222223446789999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=309.74 Aligned_cols=234 Identities=17% Similarity=0.261 Sum_probs=180.8
Q ss_pred eeccCCcEEEEEEEEccC------------------------CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCee
Q 000993 388 PLGHGGFGHVVLCKNKLD------------------------GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVV 443 (1196)
Q Consensus 388 ~LG~G~fG~Vy~a~~~~~------------------------g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV 443 (1196)
.||+|+||.||+|.+..+ ...||+|++... .......+.+|+.+++.++||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS--HRDIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH--HHHHHHHHHHHHHHHhcCCCCCee
Confidence 599999999999986432 235888887532 223456788999999999999999
Q ss_pred eeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh-cCCCCHHHH
Q 000993 444 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELA 521 (1196)
Q Consensus 444 ~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~ 521 (1196)
++++++.+ ....|+|||||++ +|..++.. .+.+++..+
T Consensus 80 ~~~~~~~~----------------------------------------~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~ 119 (274)
T cd05076 80 FVHGVCVR----------------------------------------GSENIMVEEFVEHGPLDVCLRKEKGRVPVAWK 119 (274)
T ss_pred eEEEEEEe----------------------------------------CCceEEEEecCCCCcHHHHHHhcCCCCCHHHH
Confidence 99998743 3456899999974 78888865 457899999
Q ss_pred HHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCC-------CeEEeccCcchhccccccccCCCCCCCCCCccccCcCc
Q 000993 522 WHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-------DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 594 (1196)
Q Consensus 522 ~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~-------~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (1196)
..++.||+.||+|||++||+||||||+|||++..+ .+|++|||++..... ....
T Consensus 120 ~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~-------------------~~~~ 180 (274)
T cd05076 120 ITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALS-------------------REER 180 (274)
T ss_pred HHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCcccccccc-------------------cccc
Confidence 99999999999999999999999999999997644 389999998764211 1223
Q ss_pred cccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 000993 595 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 670 (1196)
Q Consensus 595 ~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL 670 (1196)
.++..|+|||.+.+...++.++|||||||++|||++ ||......+.. .........|. ...+.+.++|.+||
T Consensus 181 ~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~li~~cl 256 (274)
T cd05076 181 VERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKE-RFYEKKHRLPE---PSCKELATLISQCL 256 (274)
T ss_pred ccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHH-HHHHhccCCCC---CCChHHHHHHHHHc
Confidence 577889999998765568999999999999999962 66554333221 11121222222 23457899999999
Q ss_pred cCCCCCCCCHHHHHhc
Q 000993 671 SPSPSDRPSATELLQD 686 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~ 686 (1196)
+.+|.+|||+.+++++
T Consensus 257 ~~~p~~Rps~~~il~~ 272 (274)
T cd05076 257 TYEPTQRPSFRTILRD 272 (274)
T ss_pred ccChhhCcCHHHHHHh
Confidence 9999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=308.01 Aligned_cols=235 Identities=16% Similarity=0.249 Sum_probs=180.0
Q ss_pred eeeccCCcEEEEEEEEccC------------CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 387 QPLGHGGFGHVVLCKNKLD------------GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~------------g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
+.||+|+||.||+|++... ...+|+|++.... ......+.+|+.+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~--- 75 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVR--- 75 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEec---
Confidence 3689999999999986422 2358888875432 2344578889999999999999999988743
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh-cCCCCHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qIa~gL 532 (1196)
....+++|||+++ +|..++.. ...+++..++.++.||+.||
T Consensus 76 -------------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l 118 (262)
T cd05077 76 -------------------------------------DVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASAL 118 (262)
T ss_pred -------------------------------------CCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 2345899999974 77777764 35699999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCC-------eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchh
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARND-------IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 605 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~-------vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 605 (1196)
+|||+++|+||||||+|||++.++. +|++|||++..... .....++..|+|||.
T Consensus 119 ~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~-------------------~~~~~~~~~y~aPE~ 179 (262)
T cd05077 119 SYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLS-------------------RQECVERIPWIAPEC 179 (262)
T ss_pred HHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccC-------------------cccccccccccChhh
Confidence 9999999999999999999987664 89999999864321 123467889999999
Q ss_pred ccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHH
Q 000993 606 EQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT 681 (1196)
Q Consensus 606 l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ 681 (1196)
+.....++.++|||||||++|||++ ||......+.. .... ...+ ......+++.+||.+||+.||.+||++.
T Consensus 180 ~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~--~~~~-~~~~~~~~~~~li~~cl~~dp~~Rp~~~ 255 (262)
T cd05077 180 VEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYE--GQCM-LVTPSCKELADLMTHCMNYDPNQRPFFR 255 (262)
T ss_pred hcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHh--cCcc-CCCCChHHHHHHHHHHcCCChhhCcCHH
Confidence 8754668999999999999999973 55543322211 1111 1111 1122346789999999999999999999
Q ss_pred HHHhc
Q 000993 682 ELLQD 686 (1196)
Q Consensus 682 eiL~~ 686 (1196)
+|+++
T Consensus 256 ~il~~ 260 (262)
T cd05077 256 AIMRD 260 (262)
T ss_pred HHHHh
Confidence 99975
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-32 Score=301.15 Aligned_cols=245 Identities=24% Similarity=0.417 Sum_probs=193.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.+|++.+.||.|+||.||+|.+. ++..+|+|.+...... ...+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------- 70 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS---EEDFIEEAQVMMKLSHPKLVQLYGVCTE--------- 70 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC---HHHHHHHHHHHHhCCCCCeeeEEEEEcc---------
Confidence 57899999999999999999886 5778999988643322 3568899999999999999999987632
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....|++|||+. ++|.+++... ..++++.++.++.|++.||+|||++
T Consensus 71 -------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~ 119 (256)
T cd05112 71 -------------------------------RSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS 119 (256)
T ss_pred -------------------------------CCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 345799999997 5898888754 4689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
+++||||||+||+++.++.+||+|||+++....... .......++..|+|||.+.+ ..++.++||
T Consensus 120 ~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~--------------~~~~~~~~~~~~~aPe~~~~-~~~~~~~Dv 184 (256)
T cd05112 120 NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY--------------TSSTGTKFPVKWSSPEVFSF-SKYSSKSDV 184 (256)
T ss_pred CccccccccceEEEcCCCeEEECCCcceeecccCcc--------------cccCCCccchhhcCHhHhcc-CCcChHHHH
Confidence 999999999999999999999999999875422110 01122345678999999987 568999999
Q ss_pred HHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 619 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 619 wSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||||+++|||++ ||........... +...... ......+..+.+|+.+||+.+|.+|||+.++++.
T Consensus 185 ~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 185 WSFGVLMWEVFSEGKTPYENRSNSEVVET-INAGFRL-YKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred HHHHHHHHHHHcCCCCCCCcCCHHHHHHH-HhCCCCC-CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 999999999986 6765444333322 2211111 1112245789999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-32 Score=303.28 Aligned_cols=243 Identities=23% Similarity=0.346 Sum_probs=191.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||+|+||.||+|.+..+ ..+|+|.+..... ..+.+.+|+.+++.++||||+++++++.
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~---------- 71 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM---MPEAFLQEAQIMKKLRHDKLVPLYAVVS---------- 71 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc---cHHHHHHHHHHHHhCCCCCeeeEEEEEc----------
Confidence 5689999999999999999998744 4699998764332 2456889999999999999999987651
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHh
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....|++|||++ ++|.+++.... .+++..+..++.||+.||+|||+
T Consensus 72 -------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~ 120 (260)
T cd05069 72 -------------------------------EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER 120 (260)
T ss_pred -------------------------------CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 123589999997 59999987543 48899999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
.|++||||||+||++++++.++|+|||+++....... .......++..|+|||.+.+ ..++.++|
T Consensus 121 ~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~~Pe~~~~-~~~~~~~D 185 (260)
T cd05069 121 MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY--------------TARQGAKFPIKWTAPEAALY-GRFTIKSD 185 (260)
T ss_pred CCEeecccCcceEEEcCCCeEEECCCccceEccCCcc--------------cccCCCccchhhCCHHHhcc-CCcChHHH
Confidence 9999999999999999999999999999976432110 01112346778999999877 56899999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 618 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 618 VwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
||||||++|||++ ||......+.... +... ..++.....+..+.+++++||..||.+||+++++++
T Consensus 186 i~slG~~l~el~t~g~~p~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 186 VWSFGILLTELVTKGRVPYPGMVNREVLEQ-VERG-YRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHcC-CCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 9999999999996 7765544443322 2222 222233345678999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-32 Score=312.13 Aligned_cols=249 Identities=21% Similarity=0.324 Sum_probs=192.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-------CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeec
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKL-------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFET 452 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~-------~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~ 452 (1196)
++|.+.++||+|+||.||+|++.. ....+|+|+++... .......+.+|+.+++.+ +||||+++++++..
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 89 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-TDKDLADLISEMELMKLIGKHKNIINLLGVCTQ- 89 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc-
Confidence 578899999999999999998642 34579999876432 334456788999999999 69999999988732
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------------CC
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DH 515 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~ 515 (1196)
...+|++|||++ ++|.+++... ..
T Consensus 90 ---------------------------------------~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~ 130 (314)
T cd05099 90 ---------------------------------------EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQ 130 (314)
T ss_pred ---------------------------------------CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccc
Confidence 345799999997 5999998653 24
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcc
Q 000993 516 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 595 (1196)
Q Consensus 516 l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (1196)
++...+..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++........ .......
T Consensus 131 l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~-------------~~~~~~~ 197 (314)
T cd05099 131 LSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYY-------------KKTSNGR 197 (314)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEccccccccccccccc-------------cccccCC
Confidence 788899999999999999999999999999999999999999999999999864321100 0011223
Q ss_pred ccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccc
Q 000993 596 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 671 (1196)
Q Consensus 596 GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~ 671 (1196)
+++.|||||++.+ ..++.++|||||||++|||++ ||.......... .+. ....+......+.++.+++.+||.
T Consensus 198 ~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~li~~cl~ 274 (314)
T cd05099 198 LPVKWMAPEALFD-RVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFK-LLR-EGHRMDKPSNCTHELYMLMRECWH 274 (314)
T ss_pred CCccccCHHHHcc-CCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHH-HHH-cCCCCCCCCCCCHHHHHHHHHHcC
Confidence 4568999999987 568999999999999999986 565443333222 222 222222233456689999999999
Q ss_pred CCCCCCCCHHHHHhc
Q 000993 672 PSPSDRPSATELLQD 686 (1196)
Q Consensus 672 ~dP~~RPta~eiL~~ 686 (1196)
.||.+|||+.++++.
T Consensus 275 ~~p~~Rps~~~ll~~ 289 (314)
T cd05099 275 AVPTQRPTFKQLVEA 289 (314)
T ss_pred CCcccCcCHHHHHHH
Confidence 999999999999863
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-32 Score=304.42 Aligned_cols=247 Identities=24% Similarity=0.343 Sum_probs=195.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
++|.+.+.||+|+||.||+|.+... ...||||...... .....+.+.+|+.+++.++||||+++++++..
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------ 78 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT-SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE------ 78 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC------
Confidence 5688999999999999999998644 3468999875332 23455688999999999999999999987621
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...|++|||++ ++|.+++.... .+++..++.++.||+.||+||
T Consensus 79 -----------------------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l 123 (270)
T cd05056 79 -----------------------------------NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYL 123 (270)
T ss_pred -----------------------------------CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 23589999997 59999997644 589999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++|++||||||+||+++.++.+||+|||+++....... ...+...+++.|+|||.+.+ ..++.+
T Consensus 124 H~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~ 188 (270)
T cd05056 124 ESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY--------------YKASKGKLPIKWMAPESINF-RRFTSA 188 (270)
T ss_pred HhCCeeccccChheEEEecCCCeEEccCceeeecccccc--------------eecCCCCccccccChhhhcc-CCCCch
Confidence 999999999999999999999999999999976432210 01122335678999999876 568999
Q ss_pred chhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 616 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||||||++|||++ ||......+...... ....++.+...++.+.++|.+||..+|.+|||+.+++..
T Consensus 189 ~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 189 SDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIE--NGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred hhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH--cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999884 787665544443322 222233334566799999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-32 Score=309.40 Aligned_cols=257 Identities=19% Similarity=0.320 Sum_probs=189.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCCchhH---------HHHHHHHHHHHhcCCCCeeeeeee
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVN---------DRILREVATLSRLQHQHVVRYYQA 448 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~---g~~vAVK~i~~~~~~~~~~---------~~~~~Ev~iL~~L~HpnIV~l~~~ 448 (1196)
++|.+.+.||+|+||+||+|.+..+ +..+|+|+........... .....+...+..++|+||++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 6899999999999999999999877 6678888654433221111 112334455667799999999987
Q ss_pred eeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHH
Q 000993 449 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQI 528 (1196)
Q Consensus 449 ~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI 528 (1196)
+.... ....+.|++|+++..++.+.+.....+++..++.++.||
T Consensus 92 ~~~~~------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi 135 (294)
T PHA02882 92 GSFKR------------------------------------CRMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDM 135 (294)
T ss_pred eeEec------------------------------------CCceEEEEEEehhccCHHHHHHhhccCCHHHHHHHHHHH
Confidence 63210 112356889999988888888776667889999999999
Q ss_pred HHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 529 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 529 a~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
+.||+|||+++|+||||||+|||++.++.++|+|||+|+.+......... .........||+.|+|||++.+
T Consensus 136 ~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~--------~~~~~~~~~gt~~y~ape~~~~ 207 (294)
T PHA02882 136 LTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEY--------SKEQKDLHRGTLYYAGLDAHNG 207 (294)
T ss_pred HHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCccccc--------ccccccccCCCccccCHHHhCC
Confidence 99999999999999999999999999999999999999865322110000 0011233479999999999987
Q ss_pred CCCCCCcchhHHHHHHHHHhhc---CCchhHH-HHHH-------HHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCC
Q 000993 609 WPKIDEKADMYSLGIVFFELWH---PFSTAME-RQIV-------LSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677 (1196)
Q Consensus 609 ~~~~s~ksDVwSlGviLyELlt---Pf~~~~~-~~~~-------~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~R 677 (1196)
..++.++|||||||+||||++ ||..... .... ...+. .... .....+..+.++++.|+..+|.+|
T Consensus 208 -~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~r 283 (294)
T PHA02882 208 -ACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLH-EGKI--KIKNANKFIYDFIECVTKLSYEEK 283 (294)
T ss_pred -CCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhh-hhhh--ccCCCCHHHHHHHHHHHhCCCCCC
Confidence 568999999999999999996 8865522 1111 11111 1111 122345689999999999999999
Q ss_pred CCHHHHHh
Q 000993 678 PSATELLQ 685 (1196)
Q Consensus 678 Pta~eiL~ 685 (1196)
|++.++++
T Consensus 284 p~~~~l~~ 291 (294)
T PHA02882 284 PDYDALIK 291 (294)
T ss_pred CCHHHHHH
Confidence 99999986
|
|
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=304.74 Aligned_cols=244 Identities=24% Similarity=0.377 Sum_probs=182.4
Q ss_pred eeccCCcEEEEEEEEcc--CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCC
Q 000993 388 PLGHGGFGHVVLCKNKL--DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 465 (1196)
Q Consensus 388 ~LG~G~fG~Vy~a~~~~--~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 465 (1196)
.||+|+||+||+|.... ....+|+|.+... ........+.+|+.+++.++||||+++++.+.+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~-------------- 66 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRAS-ATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIE-------------- 66 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCcc-CChHHHHHHHHHHHHHHhCCCCCcceEEEEECC--------------
Confidence 68999999999997542 3457888876532 233345678899999999999999999988732
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 466 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-----HFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 466 g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-----~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+|+||||++ ++|.+++.... .+++..++.++.||+.||+|||++|
T Consensus 67 --------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 120 (269)
T cd05042 67 --------------------------SIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD 120 (269)
T ss_pred --------------------------CCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC
Confidence 345799999997 59999986543 2467888999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC------CCCCC
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG------WPKID 613 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~------~~~~s 613 (1196)
|+||||||+|||++.++.+||+|||+++....... ........+++.|+|||++.. ...++
T Consensus 121 ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~ 187 (269)
T cd05042 121 FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY-------------YITKDCHAVPLRWLAPELVEIRGQDLLPKDQT 187 (269)
T ss_pred EecccccHhheEecCCCcEEEeccccccccccchh-------------eeccCCCCCcccccCHHHHhhccccccccccc
Confidence 99999999999999999999999999864321110 001123356778999998753 13468
Q ss_pred CcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcC-CCC--CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKG-ELP--PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~-~~p--~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++|||||||++|||++ ||....+.+.......... ..+ ......++...+++..|| .||.+|||+++|++.
T Consensus 188 ~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~ 266 (269)
T cd05042 188 KKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHEL 266 (269)
T ss_pred hhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHH
Confidence 89999999999999986 6665544444333333221 111 122245567788999998 599999999999863
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-32 Score=300.66 Aligned_cols=245 Identities=25% Similarity=0.361 Sum_probs=194.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|.+.+.||+|+||.||+|.+. +++.||||.+..... ...++.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 72 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM---SPEAFLQEAQIMKKLRHDKLVQLYAVCSE-------- 72 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc---CHHHHHHHHHHHhhCCCCCEeeeeeeeec--------
Confidence 478999999999999999999986 567899999874333 24578899999999999999999987621
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|++|||++ ++|.+++.... .++...+..++.||+.||+|||
T Consensus 73 --------------------------------~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh 120 (261)
T cd05034 73 --------------------------------EEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE 120 (261)
T ss_pred --------------------------------CCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 245799999997 59999987643 6899999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++|++|+||||+||+++.++.+||+|||+++........ ......++..|+|||.+.+ ..++.++
T Consensus 121 ~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~--------------~~~~~~~~~~y~~PE~~~~-~~~~~~~ 185 (261)
T cd05034 121 SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYT--------------AREGAKFPIKWTAPEAANY-GRFTIKS 185 (261)
T ss_pred hCCcccCCcchheEEEcCCCCEEECccccceeccchhhh--------------hhhccCCCccccCHHHhcc-CCcCchh
Confidence 999999999999999999999999999998765321100 0112234678999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
|||||||++|+|++ ||.............. .. .++.....+.++.+++.+||+.+|.+||+++++++
T Consensus 186 Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 186 DVWSFGILLTEIVTYGRVPYPGMTNREVLEQVER-GY-RMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CC-CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 99999999999996 6655444333333222 21 12222334678999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=311.33 Aligned_cols=249 Identities=22% Similarity=0.349 Sum_probs=195.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCc----EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGR----HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.++|+..+.||+|+||.||+|.+..+|. .+|+|.+.... .......+.+|+.+++.++||||+++++.|..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~---- 80 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT-GPKANVEFMDEALIMASMDHPHLVRLLGVCLS---- 80 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC----
Confidence 3688899999999999999999987776 46888775332 22334568899999999999999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~ 533 (1196)
...++++||++ |+|.+++.... .+++..++.++.||+.||+
T Consensus 81 -------------------------------------~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~ 123 (303)
T cd05110 81 -------------------------------------PTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMM 123 (303)
T ss_pred -------------------------------------CCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHH
Confidence 12468999997 68999887644 6899999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+||+++.++.+||+|||+++....... ........++..|+|||.+.+ ..++
T Consensus 124 ~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~~PE~~~~-~~~~ 189 (303)
T cd05110 124 YLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK-------------EYNADGGKMPIKWMALECIHY-RKFT 189 (303)
T ss_pred HHhhcCeeccccccceeeecCCCceEEccccccccccCccc-------------ccccCCCccccccCCHHHhcc-CCCC
Confidence 99999999999999999999999999999999986532110 011223456788999999887 5689
Q ss_pred CcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++|||||||++|||++ ||........ ...+. ....++.....+..+.+++.+||..+|++||++.++++.
T Consensus 190 ~~~DiwslG~~l~el~t~g~~p~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 190 HQSDVWSYGVTIWELMTFGGKPYDGIPTREI-PDLLE-KGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHH-CCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999999975 6655433222 22222 333333334456789999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-32 Score=299.81 Aligned_cols=245 Identities=25% Similarity=0.341 Sum_probs=195.4
Q ss_pred ceEEeeeccCCcEEEEEEEEccCC----cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDG----RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+.+.+.||.|+||.||+|.+..++ ..||+|++.... .......+.+|+..++.++||||+++++.+.+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------- 72 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA-DEQQIEEFLREARIMRKLDHPNIVKLLGVCTE------- 72 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC-ChHHHHHHHHHHHHHHhcCCCchheEEEEEcC-------
Confidence 356788999999999999998766 899999986432 22256688999999999999999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~--l~e~~~~~i~~qIa~gL~yL 535 (1196)
....|++|||++ ++|.+++..... +++..++.++.||+.||+||
T Consensus 73 ---------------------------------~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~l 119 (258)
T smart00219 73 ---------------------------------EEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYL 119 (258)
T ss_pred ---------------------------------CCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHH
Confidence 246799999997 599999876544 99999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|+.+++||||||+||+++.++.++|+|||+++........ ......+++.|+|||.+.+ ..++.+
T Consensus 120 h~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~--------------~~~~~~~~~~y~~Pe~~~~-~~~~~~ 184 (258)
T smart00219 120 ESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY--------------KKKGGKLPIRWMAPESLKD-GKFTSK 184 (258)
T ss_pred hcCCeeecccccceEEEccCCeEEEcccCCceeccccccc--------------ccccCCCcccccChHHhcc-CCCCcc
Confidence 9999999999999999999999999999999765322100 0112237889999999866 568999
Q ss_pred chhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 616 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 616 sDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
+||||||+++|+|++ ||............. ....++.....+.++.+++.+||+.||.+|||+.++++
T Consensus 185 ~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 185 SDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLK--KGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred hhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh--cCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 999999999999985 565443333332222 22233333446778999999999999999999999986
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-32 Score=299.02 Aligned_cols=241 Identities=23% Similarity=0.326 Sum_probs=189.3
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSG 466 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g 466 (1196)
+.||.|+||.||+|... ++..||+|.++.. ........+.+|+.+++.++||||+++++.+..
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------------- 63 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKED-LPQELKIKFLSEARILKQYDHPNIVKLIGVCTQ--------------- 63 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCc-CCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEec---------------
Confidence 36899999999999865 7889999987643 233344578899999999999999999987732
Q ss_pred cccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccC
Q 000993 467 TLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544 (1196)
Q Consensus 467 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrD 544 (1196)
....++||||++ ++|.+++... ..+++..++.++.|++.||.|||++|++|||
T Consensus 64 -------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~d 118 (250)
T cd05085 64 -------------------------RQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRD 118 (250)
T ss_pred -------------------------CCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence 235699999996 5899888653 4689999999999999999999999999999
Q ss_pred CCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHH
Q 000993 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 624 (1196)
Q Consensus 545 LKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGvi 624 (1196)
|||+||+++.++.+||+|||++........ .......+++.|+|||++.+ ..++.++||||||++
T Consensus 119 l~p~nili~~~~~~~l~d~g~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~l 183 (250)
T cd05085 119 LAARNCLVGENNVLKISDFGMSRQEDDGIY--------------SSSGLKQIPIKWTAPEALNY-GRYSSESDVWSYGIL 183 (250)
T ss_pred cChheEEEcCCCeEEECCCccceecccccc--------------ccCCCCCCcccccCHHHhcc-CCCCchhHHHHHHHH
Confidence 999999999999999999999875321110 00112244678999999987 568999999999999
Q ss_pred HHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 625 FFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 625 LyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|+|++ ||............ . ...........++.+.+++.+||+.+|.+||++.++++.
T Consensus 184 l~~~~~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 247 (250)
T cd05085 184 LWETFSLGVCPYPGMTNQQAREQV-E-KGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKE 247 (250)
T ss_pred HHHHhcCCCCCCCCCCHHHHHHHH-H-cCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 999986 77655443332222 2 222222333456789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-32 Score=304.42 Aligned_cols=239 Identities=24% Similarity=0.365 Sum_probs=185.3
Q ss_pred eeccCCcEEEEEEEEccCCc--EEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 388 PLGHGGFGHVVLCKNKLDGR--HYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 388 ~LG~G~fG~Vy~a~~~~~g~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
.||+|+||.||+|+++.++. .+|+|.++. .........+.+|+.+++.+ +||||+++++++..
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~------------- 67 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH------------- 67 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccc-cCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEec-------------
Confidence 58999999999999988776 467887652 22334456788999999999 89999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----------------CCCHHHHHHHHHH
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HFDKELAWHLFRQ 527 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l~e~~~~~i~~q 527 (1196)
...+|++|||++ ++|.+++.... .++++.++.++.|
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 120 (270)
T cd05047 68 ---------------------------RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 120 (270)
T ss_pred ---------------------------CCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHH
Confidence 234699999997 69999986532 4788999999999
Q ss_pred HHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 528 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 528 Ia~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
++.||+|||++|++||||||+|||++.++.+||+|||++...... ........++.|+|||++.
T Consensus 121 i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~----------------~~~~~~~~~~~y~apE~~~ 184 (270)
T cd05047 121 VARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY----------------VKKTMGRLPVRWMAIESLN 184 (270)
T ss_pred HHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccccchh----------------hhccCCCCccccCChHHHc
Confidence 999999999999999999999999999999999999998532100 0011123467899999987
Q ss_pred CCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHH
Q 000993 608 GWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 683 (1196)
Q Consensus 608 ~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ei 683 (1196)
+ ..++.++|||||||++|||++ ||........... .. ....++.....+.++.+|+.+||..||.+|||+.++
T Consensus 185 ~-~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i 261 (270)
T cd05047 185 Y-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK-LP-QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQI 261 (270)
T ss_pred c-CCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHH-Hh-CCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHH
Confidence 6 568999999999999999985 7755443332222 22 111222223456789999999999999999999999
Q ss_pred Hhc
Q 000993 684 LQD 686 (1196)
Q Consensus 684 L~~ 686 (1196)
++.
T Consensus 262 l~~ 264 (270)
T cd05047 262 LVS 264 (270)
T ss_pred HHH
Confidence 864
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=324.28 Aligned_cols=251 Identities=23% Similarity=0.351 Sum_probs=205.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccC-Cc--EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLD-GR--HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~-g~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
-.++..+.++||+|.||.|++|.|... |+ .||||+++..... ....+|++|+.+|.+|+|||++++||+.+.
T Consensus 108 pee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~-~~mddflrEas~M~~L~H~hliRLyGvVl~---- 182 (1039)
T KOG0199|consen 108 PEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLN-AIMDDFLREASHMLKLQHPHLIRLYGVVLD---- 182 (1039)
T ss_pred cHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccc-hhHHHHHHHHHHHHhccCcceeEEeeeecc----
Confidence 345667778999999999999999743 33 5899998754333 267899999999999999999999998742
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh--cCCCCHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qIa~gL 532 (1196)
..+.+|||+|+ |+|.+.|+. ...|.......|+.|||.||
T Consensus 183 -------------------------------------qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM 225 (1039)
T KOG0199|consen 183 -------------------------------------QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAM 225 (1039)
T ss_pred -------------------------------------chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHH
Confidence 23468999997 799999987 34588889999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
.||.++++|||||..+|+|+-....|||+|||+.+.+..+.. .........-...|+|||.+.. ..+
T Consensus 226 ~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned------------~Yvm~p~rkvPfAWCaPEsLrh-~kF 292 (1039)
T KOG0199|consen 226 QYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENED------------MYVMAPQRKVPFAWCAPESLRH-RKF 292 (1039)
T ss_pred HHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCc------------ceEecCCCcCcccccCHhHhcc-ccc
Confidence 999999999999999999999999999999999998764431 1111223345678999999998 689
Q ss_pred CCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 613 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+.++|||+|||+||||++ ||.+....++...+- .+...+....++.++.++++.||..+|.+|||+..|...
T Consensus 293 ShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD--~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 293 SHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID--AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred cccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc--ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 999999999999999997 888777766655443 444445555677899999999999999999999998643
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-33 Score=316.47 Aligned_cols=243 Identities=23% Similarity=0.368 Sum_probs=202.1
Q ss_pred eEEeeeccCCcEEEEEEEEccC--Cc--EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 384 EELQPLGHGGFGHVVLCKNKLD--GR--HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 384 ~~~~~LG~G~fG~Vy~a~~~~~--g~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.+.+.||.|.||.||+|....- |+ .||||.-+ .++.....+.|+.|..+|+.++|||||+++|+|.+
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK-~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-------- 462 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCK-TDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-------- 462 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhc-cCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec--------
Confidence 3446799999999999987522 33 58888765 44666678899999999999999999999999854
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...|||||+++ |.|..+|+.+ ..++......|+.||+.||+|||+
T Consensus 463 ---------------------------------~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeS 509 (974)
T KOG4257|consen 463 ---------------------------------QPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLES 509 (974)
T ss_pred ---------------------------------cceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHh
Confidence 34699999998 7999999865 468888999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
..+|||||..+|||+.+..-+||+|||+++.+....... .+...-..-|||||.+.- ..++.++|
T Consensus 510 krfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYk--------------aS~~kLPIKWmaPESINf-RrFTtASD 574 (974)
T KOG4257|consen 510 KRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYK--------------ASRGKLPIKWMAPESINF-RRFTTASD 574 (974)
T ss_pred hchhhhhhhhhheeecCcceeeecccchhhhccccchhh--------------ccccccceeecCccccch-hcccchhh
Confidence 999999999999999999999999999999876443221 122334567999999876 67999999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 618 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 618 VwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
||.|||.+||++. ||.+..+...... .+++..+|-++.++|.+..|+.+||+.+|.+||.+.+|..
T Consensus 575 VWMFgVCmWEIl~lGvkPfqgvkNsDVI~~--iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 575 VWMFGVCMWEILSLGVKPFQGVKNSDVIGH--IENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKA 644 (974)
T ss_pred HHHHHHHHHHHHHhcCCccccccccceEEE--ecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence 9999999999985 9987766554332 2367777778889999999999999999999999999864
|
|
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-32 Score=313.54 Aligned_cols=249 Identities=23% Similarity=0.334 Sum_probs=193.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC-------CcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeec
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLD-------GRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFET 452 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~-------g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~ 452 (1196)
.+|.+.+.||+|+||.||+|++... +..||+|.++.. ........+.+|+.+++.+ +||||++++++|.+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 89 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ- 89 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc-
Confidence 4688999999999999999987532 236899987632 2333456789999999999 89999999988732
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----------------C
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------H 515 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~ 515 (1196)
...+|++|||++ ++|.+++.+.. .
T Consensus 90 ---------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~ 130 (334)
T cd05100 90 ---------------------------------------DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQ 130 (334)
T ss_pred ---------------------------------------CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCcccc
Confidence 345799999997 59999986532 3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcc
Q 000993 516 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 595 (1196)
Q Consensus 516 l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (1196)
++...+..++.||+.||+|||++|++||||||+|||++.++.+||+|||+++....... ........
T Consensus 131 l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~-------------~~~~~~~~ 197 (334)
T cd05100 131 LTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDY-------------YKKTTNGR 197 (334)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcccceecccccc-------------cccccCCC
Confidence 67788899999999999999999999999999999999999999999999975432110 00112234
Q ss_pred ccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccc
Q 000993 596 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 671 (1196)
Q Consensus 596 GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~ 671 (1196)
++..|+|||++.+ ..++.++|||||||++|||++ ||.......... .+. ....++.....+.++.+++.+||+
T Consensus 198 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~li~~cl~ 274 (334)
T cd05100 198 LPVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK-LLK-EGHRMDKPANCTHELYMIMRECWH 274 (334)
T ss_pred cCceEcCHHHhcc-CCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHH-HHH-cCCCCCCCCCCCHHHHHHHHHHcc
Confidence 5678999999987 568999999999999999985 665544333322 222 222223334556789999999999
Q ss_pred CCCCCCCCHHHHHhc
Q 000993 672 PSPSDRPSATELLQD 686 (1196)
Q Consensus 672 ~dP~~RPta~eiL~~ 686 (1196)
.+|.+||++.+++++
T Consensus 275 ~~p~~Rps~~ell~~ 289 (334)
T cd05100 275 AVPSQRPTFKQLVED 289 (334)
T ss_pred cChhhCcCHHHHHHH
Confidence 999999999999975
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-32 Score=302.47 Aligned_cols=233 Identities=19% Similarity=0.297 Sum_probs=183.0
Q ss_pred eeeccCCcEEEEEEEEccCC----------cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 387 QPLGHGGFGHVVLCKNKLDG----------RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g----------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
+.||+|+||.||+|.+..++ ..+++|.+..... ....+.+|+.+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 72 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR---DSLAFFETASLMSQLSHKHLVKLYGVCVR----- 72 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh---hHHHHHHHHHHHHcCCCcchhheeeEEec-----
Confidence 36899999999999998766 3578887653322 15678999999999999999999988732
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~y 534 (1196)
...++||||++ ++|.+++.... .++...+..++.||+.||+|
T Consensus 73 ------------------------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~ 116 (259)
T cd05037 73 ------------------------------------DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHY 116 (259)
T ss_pred ------------------------------------CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHH
Confidence 23489999997 58999988765 79999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCC-------CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 535 IHGQGIIHRDLTPNNIFFDARN-------DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~-------~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
||++||+||||||+|||++.++ .+||+|||++..... .....++..|+|||++.
T Consensus 117 LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~-------------------~~~~~~~~~y~aPE~~~ 177 (259)
T cd05037 117 LEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS-------------------REERVERIPWIAPECIR 177 (259)
T ss_pred HhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccccc-------------------ccccccCCCccChhhhc
Confidence 9999999999999999999887 799999999975421 11235677899999998
Q ss_pred CC-CCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHH
Q 000993 608 GW-PKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 682 (1196)
Q Consensus 608 ~~-~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~e 682 (1196)
+. ..++.++|||||||++|||++ ||.......... ........+.. ....+.++|.+||..+|.+|||+.+
T Consensus 178 ~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~li~~~l~~~p~~Rpt~~~ 253 (259)
T cd05037 178 NGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKER-FYQDQHRLPMP---DCAELANLINQCWTYDPTKRPSFRA 253 (259)
T ss_pred CCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHH-HHhcCCCCCCC---CchHHHHHHHHHhccChhhCCCHHH
Confidence 74 368999999999999999985 454443222111 11112222211 1268899999999999999999999
Q ss_pred HHhc
Q 000993 683 LLQD 686 (1196)
Q Consensus 683 iL~~ 686 (1196)
+++.
T Consensus 254 il~~ 257 (259)
T cd05037 254 ILRD 257 (259)
T ss_pred HHHh
Confidence 9864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-32 Score=303.32 Aligned_cols=247 Identities=25% Similarity=0.368 Sum_probs=195.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc----EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGR----HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
.+|.+.+.||+|+||.||+|.++.+|. .+|+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 80 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET-SPKANKEILDEAYVMASVDHPHVVRLLGICLS----- 80 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-----
Confidence 678999999999999999999887665 58999876432 33455678899999999999999999988731
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+++|||++ ++|.+++... ..+++..++.++.||+.||+|
T Consensus 81 ------------------------------------~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~ 124 (279)
T cd05057 81 ------------------------------------SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSY 124 (279)
T ss_pred ------------------------------------CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence 34689999996 5999988764 469999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++|++||||||+||+++.++.+||+|||+++....... ........++..|+|||.+.. ..++.
T Consensus 125 LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~~PE~~~~-~~~~~ 190 (279)
T cd05057 125 LEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEK-------------EYHAEGGKVPIKWMALESILH-RIYTH 190 (279)
T ss_pred HHhCCEEecccCcceEEEcCCCeEEECCCcccccccCccc-------------ceecCCCcccccccCHHHhhc-CCcCc
Confidence 9999999999999999999999999999999986532110 001112234678999999876 56899
Q ss_pred cchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 615 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 615 ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
++|+|||||++||+++ ||......+... .+. .....+.....+..+.+++.+||..||.+||++.++++
T Consensus 191 ~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 191 KSDVWSYGVTVWELMTFGAKPYEGIPAVEIPD-LLE-KGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred hhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHH-HHh-CCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 9999999999999986 666554443332 222 22222223345568899999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-33 Score=314.97 Aligned_cols=245 Identities=23% Similarity=0.315 Sum_probs=202.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+.....+||-|.||.||.|.|+...-.||||.++- +....++|+.|..+|+.++|||+|+++|+|..
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE---DtMeveEFLkEAAvMKeikHpNLVqLLGVCT~---------- 334 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTH---------- 334 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhh---cchhHHHHHHHHHHHHhhcCccHHHHhhhhcc----------
Confidence 45567799999999999999999999999998862 33456789999999999999999999999832
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHHhC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~--l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
..-+|||.|||. |.|.++|++.++ ++.-..+.++.||.+||+||..+
T Consensus 335 ------------------------------EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk 384 (1157)
T KOG4278|consen 335 ------------------------------EPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK 384 (1157)
T ss_pred ------------------------------CCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh
Confidence 456799999985 899999987654 66667788899999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
++|||||..+|+|+.++..||++|||++++...+.+. .+-+..-..-|.|||-|.. ..++.|+||
T Consensus 385 nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYT--------------AHAGAKFPIKWTAPEsLAy-NtFSiKSDV 449 (1157)
T KOG4278|consen 385 NFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYT--------------AHAGAKFPIKWTAPESLAY-NTFSIKSDV 449 (1157)
T ss_pred hhhhhhhhhhhccccccceEEeeccchhhhhcCCcee--------------cccCccCcccccCcccccc-cccccchhh
Confidence 9999999999999999999999999999987543321 1222334567999999886 679999999
Q ss_pred HHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 619 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 619 wSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|+|||+|||+.| ||.+.+..+++ .+..++..-.....+++....||+.||+.+|.+||++.+|-+.
T Consensus 450 WAFGVLLWEIATYGMsPYPGidlSqVY--~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqa 519 (1157)
T KOG4278|consen 450 WAFGVLLWEIATYGMSPYPGIDLSQVY--GLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQA 519 (1157)
T ss_pred HHHHHHHHHHHhcCCCCCCCccHHHHH--HHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHH
Confidence 999999999986 77665544332 2334555555666788899999999999999999999998653
|
|
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-32 Score=305.56 Aligned_cols=259 Identities=27% Similarity=0.425 Sum_probs=202.2
Q ss_pred CceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCC--CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCcc
Q 000993 382 DFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~ 455 (1196)
+|++.+.||+|+||.||+|++. .++..||||+++.... .......+.+|+.++..+ +||||+++++++.
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~----- 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQ----- 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeee-----
Confidence 4788999999999999999864 4678999999874322 122345688999999999 6999999987762
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+|+||||++ ++|.+++.....+++..++.++.|++.||+|
T Consensus 76 -----------------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~ 120 (288)
T cd05583 76 -----------------------------------TDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDH 120 (288)
T ss_pred -----------------------------------cCCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHH
Confidence 2356799999997 5999998877889999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC-CCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP-KID 613 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~s 613 (1196)
||+.+++||||||+||+++.++.++|+|||+++...... ........|++.|+|||.+.+.. ..+
T Consensus 121 lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~~~~~~~ 186 (288)
T cd05583 121 LHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE--------------EERAYSFCGTIEYMAPEVIRGGSGGHD 186 (288)
T ss_pred HHHCCeeccCCCHHHeEECCCCCEEEEECcccccccccc--------------ccccccccCCccccCHHHhcCCCCCCc
Confidence 999999999999999999999999999999987643221 01112346889999999987632 368
Q ss_pred CcchhHHHHHHHHHhhc---CCchhH----HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC---HHHH
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS---ATEL 683 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~----~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt---a~ei 683 (1196)
.++|+||||+++|||++ ||.... ........... .++......+.+.++|.+||+.||++||| +.++
T Consensus 187 ~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~ 263 (288)
T cd05583 187 KAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS---KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEI 263 (288)
T ss_pred chhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc---CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHH
Confidence 89999999999999997 664221 11222222221 12223335578999999999999999998 5677
Q ss_pred HhccCCCCchHHHH
Q 000993 684 LQDALPPQMEYELL 697 (1196)
Q Consensus 684 L~~~~~~~~~~~~~ 697 (1196)
|+|+|+....++.+
T Consensus 264 l~~~~~~~~~~~~~ 277 (288)
T cd05583 264 KNHPFFQGIDWDDL 277 (288)
T ss_pred hcCcccccCCHHHH
Confidence 99999999887644
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-32 Score=301.82 Aligned_cols=249 Identities=29% Similarity=0.444 Sum_probs=195.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecC---CCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK---DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~---~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+|.+.+.||+|+||.||++++..++..+++|+++.. ........++.+|+.+++.++||||+++++++.+
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 73 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLE------- 73 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhc-------
Confidence 478889999999999999999887777777766532 2222334567789999999999999999877632
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh----cCCCCHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
....+++|||+++ +|.+++.. ...+++..++.++.|++.||.
T Consensus 74 ---------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 120 (260)
T cd08222 74 ---------------------------------RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVH 120 (260)
T ss_pred ---------------------------------CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHH
Confidence 3457999999974 88887753 356999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++|++|+||||+||+++. +.+||+|||+++....... ......|++.|+|||.+.+ ..++
T Consensus 121 ~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~---------------~~~~~~~~~~~~~pe~~~~-~~~~ 183 (260)
T cd08222 121 YMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCD---------------LATTFTGTPYYMSPEALKH-QGYD 183 (260)
T ss_pred HHHHcCccccCCChhheEeec-CCEeecccCceeecCCCcc---------------cccCCCCCcCccCHHHHcc-CCCC
Confidence 999999999999999999975 6799999999876432110 1123457889999999876 5678
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
.++|+||||+++|+|++ ||............. ....+......+.++.++|.+||..||.+||++.++++|+|+
T Consensus 184 ~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 184 SKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIV--EGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH--cCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 89999999999999996 675544433333322 223333333456789999999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-32 Score=304.34 Aligned_cols=253 Identities=28% Similarity=0.432 Sum_probs=195.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKL----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
.+|.+.+.||+|+||.||+|++.. ++..||||+++..... .....+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~---- 78 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKP---- 78 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecC----
Confidence 467888999999999999999753 4889999998754433 3567899999999999999999999876321
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+.+++|||++ ++|.+++.... .+++..++.++.||+.||+|
T Consensus 79 ----------------------------------~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~ 124 (284)
T cd05038 79 ----------------------------------GGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDY 124 (284)
T ss_pred ----------------------------------CCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHH
Confidence 1346799999996 59999987654 69999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++|++||||||+||+++.++.++|+|||++......... ........++..|+|||.+.+ ..++.
T Consensus 125 lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~~~~Pe~~~~-~~~~~ 191 (284)
T cd05038 125 LGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDY------------YYVKEPGESPIFWYAPECLRT-SKFSS 191 (284)
T ss_pred HHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcc------------eeccCCCCCcccccCcHHHcc-CCCCc
Confidence 99999999999999999999999999999999865321100 001112345667999999877 46889
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHH--------------HHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQ--------------IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~--------------~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~R 677 (1196)
++||||||+++|||++ ||....... .....+. .....+.....+.++.+++.+||+.+|.+|
T Consensus 192 ~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~R 270 (284)
T cd05038 192 ASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLK-EGERLPRPPSCPDEVYDLMKLCWEAEPQDR 270 (284)
T ss_pred ccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHH-cCCcCCCCccCCHHHHHHHHHHhccChhhC
Confidence 9999999999999997 554322111 1111111 222222233445689999999999999999
Q ss_pred CCHHHHHhc
Q 000993 678 PSATELLQD 686 (1196)
Q Consensus 678 Pta~eiL~~ 686 (1196)
||+.++++.
T Consensus 271 pt~~ei~~~ 279 (284)
T cd05038 271 PSFADLILI 279 (284)
T ss_pred CCHHHHHHH
Confidence 999999863
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=301.31 Aligned_cols=244 Identities=21% Similarity=0.362 Sum_probs=182.8
Q ss_pred eeccCCcEEEEEEEEccCC--cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCC
Q 000993 388 PLGHGGFGHVVLCKNKLDG--RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 465 (1196)
Q Consensus 388 ~LG~G~fG~Vy~a~~~~~g--~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 465 (1196)
.||+|+||.||+|....++ ..+++|.+... ........+.+|+.+++.++||||+++++.|..
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~-------------- 66 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKAN-ASSKEQNEFLQQGDPYRILQHPNILQCLGQCVE-------------- 66 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCC-CChHHHHHHHHHHHHHhccCCcchhheEEEecC--------------
Confidence 5899999999999865332 34667766532 223445789999999999999999999988732
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 466 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----DHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 466 g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
...+|+|||||+ ++|.+++.+. ..++...++.++.||+.||+|||++++
T Consensus 67 --------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i 120 (268)
T cd05086 67 --------------------------AIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNF 120 (268)
T ss_pred --------------------------CCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCe
Confidence 345799999997 5999998753 246677788999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC------CCCCC
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW------PKIDE 614 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~------~~~s~ 614 (1196)
+||||||+|||++.++.+||+|||++....... .........+++.|+|||++... ..++.
T Consensus 121 ~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~-------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~ 187 (268)
T cd05086 121 LHSDLALRNCFLTSDLTVKVGDYGIGPSRYKED-------------YIETEDDKCVPLRWLAPELVGEFHGGLITAEQTK 187 (268)
T ss_pred eccCCccceEEEcCCccEEecccccccccCcch-------------hhhcccCCcCcccccCchhcccccCccccCCCCC
Confidence 999999999999999999999999986421110 00112345788999999987531 23578
Q ss_pred cchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCC---CCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 615 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGE---LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 615 ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~---~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++|||||||++|||++ ||....+.+.....+..... .|.......+.+.+++..|| .+|.+||++.++++.
T Consensus 188 ~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~ 265 (268)
T cd05086 188 PSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRL 265 (268)
T ss_pred cchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHH
Confidence 9999999999999984 77655554444433332211 12222335567889999999 679999999999863
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=297.41 Aligned_cols=242 Identities=23% Similarity=0.339 Sum_probs=189.8
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSG 466 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g 466 (1196)
++||.|+||.||+|.+.. ++.||+|++...... .....+.+|+.+++.++||||+++++++.+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------------- 63 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQ--------------- 63 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEec---------------
Confidence 368999999999999986 999999988754332 345678999999999999999999987632
Q ss_pred cccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCcccC
Q 000993 467 TLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544 (1196)
Q Consensus 467 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrD 544 (1196)
....|++|||++ ++|.+++.. ...++...+..++.|++.||+|||+++++|||
T Consensus 64 -------------------------~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d 118 (251)
T cd05041 64 -------------------------KQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRD 118 (251)
T ss_pred -------------------------CCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhh
Confidence 345799999996 589998865 34688999999999999999999999999999
Q ss_pred CCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHH
Q 000993 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 624 (1196)
Q Consensus 545 LKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGvi 624 (1196)
|||+||+++.++.+||+|||+++....... ........++..|+|||++.+ ..++.++|+|||||+
T Consensus 119 i~p~nili~~~~~~~l~d~g~~~~~~~~~~-------------~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~i 184 (251)
T cd05041 119 LAARNCLVGENNVLKISDFGMSREEEGGIY-------------TVSDGLKQIPIKWTAPEALNY-GRYTSESDVWSYGIL 184 (251)
T ss_pred cCcceEEEcCCCcEEEeeccccccccCCcc-------------eeccccCcceeccCChHhhcc-CCCCcchhHHHHHHH
Confidence 999999999999999999999975431110 001112234677999999887 568999999999999
Q ss_pred HHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 625 FFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 625 LyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||++ ||........... +. ....++.....+..+.+++.+||..+|.+|||+.++++.
T Consensus 185 ~~~l~t~~~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~ 248 (251)
T cd05041 185 LWETFSLGDTPYPGMSNQQTRER-IE-SGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNE 248 (251)
T ss_pred HHHHHhccCCCCccCCHHHHHHH-Hh-cCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 999996 5654443322222 22 111222233456789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-32 Score=298.59 Aligned_cols=242 Identities=32% Similarity=0.473 Sum_probs=197.9
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCCc
Q 000993 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 467 (1196)
Q Consensus 389 LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 467 (1196)
||.|+||.||++.+..+++.||+|+++..... ......+.+|+.+++.++||||+++++.+.
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----------------- 63 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQ----------------- 63 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHee-----------------
Confidence 69999999999999988999999998754322 224567889999999999999999987652
Q ss_pred ccccccccccccccccccccccccccEEEEEeeec-CCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCC
Q 000993 468 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 546 (1196)
Q Consensus 468 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~-~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLK 546 (1196)
....+|++|||+ +++|.+++.....+++..++.++.||+.||.|||+.+++|+|||
T Consensus 64 -----------------------~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~ 120 (250)
T cd05123 64 -----------------------TEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLK 120 (250)
T ss_pred -----------------------cCCeeEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCC
Confidence 245789999999 56999999888789999999999999999999999999999999
Q ss_pred cCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHH
Q 000993 547 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 626 (1196)
Q Consensus 547 p~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLy 626 (1196)
|+||+++.++.++|+|||++....... .......++..|+|||.+.+ ...+.++|+||||+++|
T Consensus 121 p~ni~~~~~~~~~l~d~~~~~~~~~~~---------------~~~~~~~~~~~~~~Pe~~~~-~~~~~~~D~~slG~~~~ 184 (250)
T cd05123 121 PENILLDADGHIKLTDFGLAKELSSEG---------------SRTNTFCGTPEYLAPEVLLG-KGYGKAVDWWSLGVLLY 184 (250)
T ss_pred cceEEEcCCCcEEEeecCcceecccCC---------------CcccCCcCCccccChHHhCC-CCCCchhhHHHHHHHHH
Confidence 999999999999999999997643211 01233468889999999887 45789999999999999
Q ss_pred Hhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH---HHHHhccCC
Q 000993 627 ELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA---TELLQDALP 689 (1196)
Q Consensus 627 ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta---~eiL~~~~~ 689 (1196)
+|++ ||...................| ...+..+.++|++||..||.+||++ +++++|+||
T Consensus 185 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 185 EMLTGKPPFYAEDRKEIYEKILKDPLRFP---EFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred HHHHCCCCCCCCCHHHHHHHHhcCCCCCC---CCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 9996 7765554333333332122222 2335689999999999999999999 999999997
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=314.02 Aligned_cols=249 Identities=24% Similarity=0.321 Sum_probs=199.4
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
.+.+.++||+|-||+|.+|.-. .+..||||+++.... ......|.+|+++|.+|+|||||+++|+|+.
T Consensus 539 ~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~-~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~---------- 606 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDAT-KNARNDFLKEIKILSRLKHPNIVELLGVCVQ---------- 606 (807)
T ss_pred heehhhhhcCcccceeEEEEec-CceEEEEeecCcccc-hhHHHHHHHHHHHHhccCCCCeeEEEeeeec----------
Confidence 4567789999999999999876 468999999875433 2345789999999999999999999999954
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
.+.++++||||. |+|.+++.... ........+++.||++||+||.+.
T Consensus 607 ------------------------------DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~ 656 (807)
T KOG1094|consen 607 ------------------------------DDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL 656 (807)
T ss_pred ------------------------------CCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh
Confidence 345789999996 89999998763 345666778999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
++|||||.+.|||++.++++||+|||+++.+...... .-....+-..+|||||.+.. ++++.++|+
T Consensus 657 nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy-------------~vqgr~vlpiRwmawEsill-gkFttaSDv 722 (807)
T KOG1094|consen 657 NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYY-------------RVQGRAVLPIRWMAWESILL-GKFTTASDV 722 (807)
T ss_pred chhhccccccceeecCcccEEecCcccccccccCCce-------------eeecceeeeeeehhHHHHHh-ccccchhhh
Confidence 9999999999999999999999999999965432211 11123456789999998776 579999999
Q ss_pred HHHHHHHHHhhc-----CCchhHHHHHHHHHhhh--c-C--CCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 619 YSLGIVFFELWH-----PFSTAMERQIVLSDLKQ--K-G--ELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 619 wSlGviLyELlt-----Pf~~~~~~~~~~~~l~~--~-~--~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|+||++|||+++ ||....++++....-.. . + ..++.+.-++..+.++|-+||..|-.+||+++++..+
T Consensus 723 WafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~ 800 (807)
T KOG1094|consen 723 WAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLF 800 (807)
T ss_pred hhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHH
Confidence 999999999984 99888877765432211 1 1 1223333455688999999999999999999999654
|
|
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.6e-31 Score=296.53 Aligned_cols=244 Identities=25% Similarity=0.345 Sum_probs=193.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|.+. .+..+|+|.+... ......+.+|+.+++.++|+||+++++.+.+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------- 72 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG---SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-------- 72 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCC---hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC--------
Confidence 478999999999999999999865 5667999987632 2234678899999999999999999877621
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...|++|||++ ++|.+++... ..++...++.++.||+.||+|||
T Consensus 73 ---------------------------------~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH 119 (260)
T cd05073 73 ---------------------------------EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 119 (260)
T ss_pred ---------------------------------CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHH
Confidence 34689999997 5999998753 35788899999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
+.|++||||||+||+++.++.+||+|||.+..+..... .......++..|+|||++.+ ..++.++
T Consensus 120 ~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--------------~~~~~~~~~~~y~~PE~~~~-~~~~~~~ 184 (260)
T cd05073 120 QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY--------------TAREGAKFPIKWTAPEAINF-GSFTIKS 184 (260)
T ss_pred hCCccccccCcceEEEcCCCcEEECCCcceeeccCCCc--------------ccccCCcccccccCHhHhcc-CCcCccc
Confidence 99999999999999999999999999999975432110 01122345678999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
|+|||||++|+|++ ||........... +. .....+.....+.++.+++.+||+.+|.+||++.++++
T Consensus 185 Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 185 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRA-LE-RGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred cchHHHHHHHHHHhcCCCCCCCCCHHHHHHH-Hh-CCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 99999999999996 7765444333222 22 22222333455678999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.4e-33 Score=296.74 Aligned_cols=253 Identities=27% Similarity=0.410 Sum_probs=202.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
++++-+..||.|+||+|++..|+.+|+..|||.|+.... .....+++.|.....+- +.||||++||+++..|
T Consensus 64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EG------ 136 (361)
T KOG1006|consen 64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEG------ 136 (361)
T ss_pred chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCC------
Confidence 345556789999999999999999999999999986554 34567888888766554 7999999999985432
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHh-----hcCCCCHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE-----SYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~-----~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
..||.||+|+-||..+.. +...++|+..-.+...++.||.|
T Consensus 137 ----------------------------------dcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~y 182 (361)
T KOG1006|consen 137 ----------------------------------DCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDY 182 (361)
T ss_pred ----------------------------------ceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHH
Confidence 359999999987765543 34579999999999999999999
Q ss_pred HHhC-CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC-C
Q 000993 535 IHGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK-I 612 (1196)
Q Consensus 535 LHs~-gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-~ 612 (1196)
|-.. .|||||+||+|||++..|.+||||||++-.+..+ +..+.-.|...|||||.+..... |
T Consensus 183 LK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S----------------iAkT~daGCrpYmAPERi~p~~~gy 246 (361)
T KOG1006|consen 183 LKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS----------------IAKTVDAGCRPYMAPERIDPSDKGY 246 (361)
T ss_pred HHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHH----------------HHhhhccCCccccChhccCCccCCc
Confidence 9875 7999999999999999999999999999876422 22344578899999999876544 9
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-----ccccCCHHHHHHHHHcccCCCCCCCCHHHHH
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-----SWVAKFSEQESLLRRLMSPSPSDRPSATELL 684 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-----~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL 684 (1196)
+.++|+|||||+|||+.| |+..++..-..+..+. .+..|. ...+.+..+..+|..||.+|-++||...+++
T Consensus 247 DiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv-~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk 325 (361)
T KOG1006|consen 247 DIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVV-IGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLK 325 (361)
T ss_pred chhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHH-cCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhh
Confidence 999999999999999998 7777766433333333 222221 2234567899999999999999999999999
Q ss_pred hccCCCC
Q 000993 685 QDALPPQ 691 (1196)
Q Consensus 685 ~~~~~~~ 691 (1196)
+++|..-
T Consensus 326 ~~~fyr~ 332 (361)
T KOG1006|consen 326 KFPFYRM 332 (361)
T ss_pred cCchhhh
Confidence 9986654
|
|
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-31 Score=298.47 Aligned_cols=239 Identities=24% Similarity=0.377 Sum_probs=190.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|++.+.||+|+||.||++.. +++.||+|+++... ....+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-------- 70 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILH-------- 70 (254)
T ss_pred HHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcC--------
Confidence 36799999999999999999864 68899999886421 24578899999999999999999987632
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...|++|||++ ++|.+++.... .+++..++.++.|++.||.|||
T Consensus 71 ---------------------------------~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH 117 (254)
T cd05083 71 ---------------------------------NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLE 117 (254)
T ss_pred ---------------------------------CCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 12589999997 59999987543 5889999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++|++||||||+||+++.++.+||+|||+++..... ......+..|+|||.+.+ ..++.++
T Consensus 118 ~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~------------------~~~~~~~~~y~~pe~~~~-~~~~~~~ 178 (254)
T cd05083 118 SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG------------------VDNSKLPVKWTAPEALKH-KKFSSKS 178 (254)
T ss_pred hCCeeccccCcceEEEcCCCcEEECCCccceecccc------------------CCCCCCCceecCHHHhcc-CCcCchh
Confidence 999999999999999999999999999998743211 011234567999999876 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|+|||||++|||++ ||......+.... .. ....++.....+..+.+++.+||+.+|.+||++.+++..
T Consensus 179 Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 250 (254)
T cd05083 179 DVWSYGVLLWEVFSYGRAPYPKMSLKEVKEC-VE-KGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREK 250 (254)
T ss_pred hHHHHHHHHHHHHhCCCCCCccCCHHHHHHH-Hh-CCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999984 6765544333222 22 222222233456789999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.2e-32 Score=321.47 Aligned_cols=251 Identities=23% Similarity=0.353 Sum_probs=209.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
.....+.++||.|.||+|++|+.+..|+ .||||.++.. .+.....+|+.|..+|-+++||||+++.|+..
T Consensus 628 ~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G-ytekqrrdFL~EAsIMGQFdHPNIIrLEGVVT------ 700 (996)
T KOG0196|consen 628 PSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG-YTEKQRRDFLSEASIMGQFDHPNIIRLEGVVT------ 700 (996)
T ss_pred hhheEEEEEEecccccceecccccCCCCcceeEEEeeeccC-ccHHHHhhhhhhhhhcccCCCCcEEEEEEEEe------
Confidence 4566788999999999999999997764 6999999754 34455678999999999999999999998862
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...-+.||.|||. |+|..+|+.+ +.|+.-+...+++.|+.||.|
T Consensus 701 ----------------------------------ks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkY 746 (996)
T KOG0196|consen 701 ----------------------------------KSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKY 746 (996)
T ss_pred ----------------------------------cCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHH
Confidence 2455789999995 7999999865 569999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
|-++|+|||||..+|||++.+..+|++|||+++.+..+. ... ....+..-..+|.|||++.. .+++.
T Consensus 747 Lsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~---~~~---------ytt~GGKIPiRWTAPEAIa~-RKFTs 813 (996)
T KOG0196|consen 747 LSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP---EAA---------YTTLGGKIPIRWTAPEAIAY-RKFTS 813 (996)
T ss_pred HhhcCchhhhhhhhheeeccceEEEeccccceeecccCC---Ccc---------ccccCCccceeecChhHhhh-cccCc
Confidence 999999999999999999999999999999999774332 111 11223344679999999987 68999
Q ss_pred cchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 615 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 615 ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++|||||||+|||.++ ||.+..+.+.. +.+.+..++|+ +..++..+..|+..||++|-.+||.+.+|+..
T Consensus 814 ASDVWSyGIVmWEVmSyGERPYWdmSNQdVI-kaIe~gyRLPp-PmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 814 ASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-KAIEQGYRLPP-PMDCPAALYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred hhhccccceEEEEecccCCCcccccchHHHH-HHHHhccCCCC-CCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 9999999999999996 88887776554 44554555554 45678899999999999999999999999964
|
|
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-31 Score=299.20 Aligned_cols=254 Identities=20% Similarity=0.264 Sum_probs=193.2
Q ss_pred ceEEeeeccCCcEEEEEEEEcc---CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 383 FEELQPLGHGGFGHVVLCKNKL---DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~---~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
|.+.+.||+|+||.||+|.++. +++.||||++..........+++.+|+.+++.++||||+++++.+.....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----- 75 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRA----- 75 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCC-----
Confidence 5677899999999999998753 57899999997655455556778999999999999999999987743210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc------CCCCHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY------DHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~------~~l~e~~~~~i~~qIa~gL 532 (1196)
.......+++++|+. ++|.+++... ..++...++.++.||+.||
T Consensus 76 -----------------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l 126 (273)
T cd05074 76 -----------------------------KGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGM 126 (273)
T ss_pred -----------------------------CCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Confidence 001234578899996 6888776422 2478899999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||++||+||||||+||+++.++.+||+|||+++....... ........+++.|++||.+.+ ..+
T Consensus 127 ~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~~~~pe~~~~-~~~ 192 (273)
T cd05074 127 EYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDY-------------YRQGCASKLPVKWLALESLAD-NVY 192 (273)
T ss_pred HHHHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcc-------------eecCCCccCchhhcCHhHHhc-Ccc
Confidence 999999999999999999999999999999999986432110 011122345678999999887 568
Q ss_pred CCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 613 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+.++|||||||++|||++ ||.............. ...+......++.+.+++.+||+.+|.+||++.+++++
T Consensus 193 ~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 193 TTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIK--GNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred chhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHc--CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 899999999999999985 5654443333222221 22222223456789999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.8e-32 Score=305.08 Aligned_cols=264 Identities=25% Similarity=0.370 Sum_probs=199.2
Q ss_pred CCCCCCCCCCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc--CCCCeee
Q 000993 367 SGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL--QHQHVVR 444 (1196)
Q Consensus 367 ~~~~~~~~~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L--~HpnIV~ 444 (1196)
+++..+.+.+.....+..+++.||+|.||+||+|+|+ |+.||||++...+ ...+.||.++.... +|+||+.
T Consensus 197 SGSGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srd-----E~SWfrEtEIYqTvmLRHENILg 269 (513)
T KOG2052|consen 197 SGSGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRD-----ERSWFRETEIYQTVMLRHENILG 269 (513)
T ss_pred CCCCchhHhHHhhhheeEEEEEecCccccceeecccc--CCceEEEEecccc-----hhhhhhHHHHHHHHHhccchhhh
Confidence 3444445555556678899999999999999999998 9999999996433 35577888877764 9999999
Q ss_pred eeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHH
Q 000993 445 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWH 523 (1196)
Q Consensus 445 l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~ 523 (1196)
++++= +++.| .-..+|+|++|.+ |||+|+|.+ ..++.+...+
T Consensus 270 FIaaD------------~~~~g------------------------s~TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~ 312 (513)
T KOG2052|consen 270 FIAAD------------NKDNG------------------------SWTQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLK 312 (513)
T ss_pred hhhcc------------ccCCC------------------------ceEEEEEeeecccCCcHHHHHhh-ccCCHHHHHH
Confidence 88552 22222 2468999999997 899999988 6799999999
Q ss_pred HHHHHHHHHHHHHhC--------CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcc
Q 000993 524 LFRQIVEGLAHIHGQ--------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 595 (1196)
Q Consensus 524 i~~qIa~gL~yLHs~--------gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (1196)
++..+|+||+|||-. .|.|||||+.|||+..++.+.|+|+|+|-..... +.......+.++
T Consensus 313 LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~-----------t~~idi~~N~rV 381 (513)
T KOG2052|consen 313 LALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSD-----------TDTIDIPPNPRV 381 (513)
T ss_pred HHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEeccc-----------CCcccCCCCCcc
Confidence 999999999999953 4999999999999999999999999999765322 122334456789
Q ss_pred ccccCCCchhccCCCC-----CCCcchhHHHHHHHHHhhc-------------CCchhHHH----HHHHH---HhhhcCC
Q 000993 596 GTYFYTAPEIEQGWPK-----IDEKADMYSLGIVFFELWH-------------PFSTAMER----QIVLS---DLKQKGE 650 (1196)
Q Consensus 596 GT~~Y~APE~l~~~~~-----~s~ksDVwSlGviLyELlt-------------Pf~~~~~~----~~~~~---~l~~~~~ 650 (1196)
||.+|||||+|...-+ --..+||||||.++||++. ||.+..+. +...+ ..+..+.
T Consensus 382 GTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ 461 (513)
T KOG2052|consen 382 GTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPN 461 (513)
T ss_pred ceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCC
Confidence 9999999999875211 1146999999999999961 77644321 11111 1222333
Q ss_pred CCCccccCC--HHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 651 LPPSWVAKF--SEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 651 ~p~~~~~~~--~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
+|..|.... ..+.++|+.||..||.-|.|+-.|-+
T Consensus 462 ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKK 498 (513)
T KOG2052|consen 462 IPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKK 498 (513)
T ss_pred CCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHH
Confidence 444454422 25678999999999999999877754
|
|
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=299.92 Aligned_cols=242 Identities=21% Similarity=0.281 Sum_probs=187.6
Q ss_pred eeccCCcEEEEEEEEccCC------cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 388 PLGHGGFGHVVLCKNKLDG------RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 388 ~LG~G~fG~Vy~a~~~~~g------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
.||+|+||.||+|+++... +.+|||.+... ........+.+|+.+++.++||||++++++|..
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------- 70 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKG-ATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL---------- 70 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcc-cchhhHHHHHHHHHHHHhcCCCCeeeEeeeecC----------
Confidence 5899999999999986443 68999987643 222345678899999999999999999988732
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-------CCCCHHHHHHHHHHHHHHHH
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------DHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------~~l~e~~~~~i~~qIa~gL~ 533 (1196)
....|++|||++ ++|.+++... ..+++..+..++.||+.||+
T Consensus 71 ------------------------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 120 (269)
T cd05044 71 ------------------------------NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCV 120 (269)
T ss_pred ------------------------------CCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHH
Confidence 235799999997 5999988642 33788999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCC-----CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARN-----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~-----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
|||+.+++|+||||+||+++.++ .++|+|||+++........ .......++..|+|||++.+
T Consensus 121 ~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aPE~~~~ 187 (269)
T cd05044 121 YLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYY-------------RKEGEGLLPVRWMAPESLLD 187 (269)
T ss_pred HHHhCCcccCCCChheEEEecCCCCCCcceEECCccccccccccccc-------------ccCcccCCCccccCHHHHcc
Confidence 99999999999999999999877 8999999999765322110 01122356788999999987
Q ss_pred CCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHH
Q 000993 609 WPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 684 (1196)
Q Consensus 609 ~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL 684 (1196)
..++.++|||||||++|||++ ||......+..... . ....+......++.+.++|.+||..+|.+||++.+++
T Consensus 188 -~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~ 264 (269)
T cd05044 188 -GKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHV-T-AGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQ 264 (269)
T ss_pred -CCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHH-h-cCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHH
Confidence 568999999999999999985 66544443332222 1 1222223344567889999999999999999999997
Q ss_pred hc
Q 000993 685 QD 686 (1196)
Q Consensus 685 ~~ 686 (1196)
+.
T Consensus 265 ~~ 266 (269)
T cd05044 265 EI 266 (269)
T ss_pred HH
Confidence 63
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.7e-31 Score=297.49 Aligned_cols=247 Identities=30% Similarity=0.511 Sum_probs=194.0
Q ss_pred CceEEeeeccCCcEEEEEEEEcc-CCcEEEEEEEecCC--------CCchhHHHHHHHHHHHHh-cCCCCeeeeeeeeee
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKL-DGRHYAVKKIRLKD--------KSLPVNDRILREVATLSR-LQHQHVVRYYQAWFE 451 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~-~g~~vAVK~i~~~~--------~~~~~~~~~~~Ev~iL~~-L~HpnIV~l~~~~~e 451 (1196)
+|++.+.||+|+||.||+|.++. +++.+|+|.+.... .......++.+|+.+++. ++||||+++++.+.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47888999999999999999987 68899999886432 122234567789888875 799999999988732
Q ss_pred cCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh----cCCCCHHHHHHHHH
Q 000993 452 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFR 526 (1196)
Q Consensus 452 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~ 526 (1196)
....|++|||+++ +|.+++.. ...+++..++.++.
T Consensus 81 ----------------------------------------~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 120 (269)
T cd08528 81 ----------------------------------------NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFV 120 (269)
T ss_pred ----------------------------------------CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHH
Confidence 3567999999975 88887743 34689999999999
Q ss_pred HHHHHHHHHHh-CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchh
Q 000993 527 QIVEGLAHIHG-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 605 (1196)
Q Consensus 527 qIa~gL~yLHs-~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 605 (1196)
|++.||.|||+ .+++|+||||+||+++.++.+||+|||++....... ......|+..|+|||.
T Consensus 121 ~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~----------------~~~~~~~~~~~~~Pe~ 184 (269)
T cd08528 121 QMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES----------------KLTSVVGTILYSCPEI 184 (269)
T ss_pred HHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccceeeccccc----------------ccccccCcccCcChhh
Confidence 99999999996 689999999999999999999999999997643211 1234568899999999
Q ss_pred ccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHH
Q 000993 606 EQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 682 (1196)
Q Consensus 606 l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~e 682 (1196)
+.+ ..++.++|+||||+++|+|++ ||.............. ....|......++.+.++|.+||+.||++||++.+
T Consensus 185 ~~~-~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e 262 (269)
T cd08528 185 VKN-EPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVE-AVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQ 262 (269)
T ss_pred hcC-CCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhh-ccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHH
Confidence 987 568999999999999999996 7765444333222221 22222222245678999999999999999999999
Q ss_pred HHhc
Q 000993 683 LLQD 686 (1196)
Q Consensus 683 iL~~ 686 (1196)
+..+
T Consensus 263 ~~~~ 266 (269)
T cd08528 263 VSAM 266 (269)
T ss_pred HHHH
Confidence 9764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-31 Score=319.69 Aligned_cols=260 Identities=22% Similarity=0.384 Sum_probs=212.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+-|++.++||.|.+|+||+++++.+++..|||++.... ...+++..|..+|+.. .|||++.+|++|.-..
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~---d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~------ 89 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE---DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKD------ 89 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc---cccHHHHHHHHHHHhccCCCCcceEEEEEEEec------
Confidence 57899999999999999999999999999999986432 3445677788899888 7999999999985432
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
......+|+|||||+ ||.-|++.. ..++.|+.+..|++.++.|+.|||
T Consensus 90 -----------------------------~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH 140 (953)
T KOG0587|consen 90 -----------------------------PGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLH 140 (953)
T ss_pred -----------------------------CCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHh
Confidence 124678999999997 588888764 457999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC----CCC
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW----PKI 612 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~~ 612 (1196)
.+.++|||||-.|||++.++.|||+|||++..+... ...+.+.+|||.|||||++... ..|
T Consensus 141 ~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT---------------~grRnT~iGtP~WMAPEViac~e~~d~ty 205 (953)
T KOG0587|consen 141 NNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDST---------------VGRRNTFIGTPYWMAPEVIACDESPDATY 205 (953)
T ss_pred hcceeeecccCceEEEeccCcEEEeeeeeeeeeecc---------------cccccCcCCCcccccceeeecccCCCCCc
Confidence 999999999999999999999999999999875321 1234667999999999998653 347
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
+..+|+|||||+..||.- |+.+.+++-..+.+.+..+.....+...+.++.++|..||.+|-.+||+..++|+|||.
T Consensus 206 d~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi 285 (953)
T KOG0587|consen 206 DYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFI 285 (953)
T ss_pred ccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcc
Confidence 889999999999999984 78887777666554432211111233455688999999999999999999999999998
Q ss_pred CCch
Q 000993 690 PQME 693 (1196)
Q Consensus 690 ~~~~ 693 (1196)
....
T Consensus 286 ~e~~ 289 (953)
T KOG0587|consen 286 TEQP 289 (953)
T ss_pred cccc
Confidence 7543
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-31 Score=293.86 Aligned_cols=228 Identities=21% Similarity=0.300 Sum_probs=178.4
Q ss_pred CCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCCccccc
Q 000993 392 GGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASS 471 (1196)
Q Consensus 392 G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~ 471 (1196)
|.||.||+|+++.+|+.||+|+++... .+.+|...+....||||+++++++.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~--------------------- 55 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIV--------------------- 55 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhhee---------------------
Confidence 899999999999999999999986432 2334555556668999999997763
Q ss_pred ccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcE
Q 000993 472 TFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 550 (1196)
Q Consensus 472 ~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NI 550 (1196)
.....|++|||++ ++|.+++.+...+++..+..++.|++.||+|||++||+||||||+||
T Consensus 56 -------------------~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Ni 116 (237)
T cd05576 56 -------------------SEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNI 116 (237)
T ss_pred -------------------cCCeEEEEEecCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHE
Confidence 2356899999997 59999998877899999999999999999999999999999999999
Q ss_pred EecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc
Q 000993 551 FFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH 630 (1196)
Q Consensus 551 Lld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt 630 (1196)
+++.++.++++|||.+...... .....++..|+|||++.+ ..++.++|+||+||++|||++
T Consensus 117 l~~~~~~~~l~df~~~~~~~~~------------------~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~ 177 (237)
T cd05576 117 LLDDRGHIQLTYFSRWSEVEDS------------------CDGEAVENMYCAPEVGGI-SEETEACDWWSLGAILFELLT 177 (237)
T ss_pred EEcCCCCEEEecccchhccccc------------------cccCCcCccccCCcccCC-CCCCchhhHHHHHHHHHHHHH
Confidence 9999999999999988654211 122356778999999876 568899999999999999997
Q ss_pred CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH-----HHHHhccCC
Q 000993 631 PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-----TELLQDALP 689 (1196)
Q Consensus 631 Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta-----~eiL~~~~~ 689 (1196)
.............. .....+| ...++.++++|++||+.||.+||++ +++++||||
T Consensus 178 g~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 178 GKTLVECHPSGINT-HTTLNIP---EWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred CcchhhcCchhccc-ccccCCc---ccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 32211100000000 0011122 2345689999999999999999985 999999996
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >PLN02908 threonyl-tRNA synthetase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-31 Score=331.52 Aligned_cols=354 Identities=14% Similarity=0.120 Sum_probs=259.8
Q ss_pred cCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----ee--cCCCcccccceEEEeecCCceEeecCCCcH
Q 000993 738 NRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRL 811 (1196)
Q Consensus 738 ~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~ 811 (1196)
.+.+.|+++|+|.++.+++.|.+.+++.+.++||++|.||.+ ++ +++.+.+.++||.| |.+++.++|||+.|+
T Consensus 307 ~~~~~G~~~~lP~g~~i~~~l~~~~~~~~~~~G~~ev~tP~l~~~~l~~~sGh~~~~~~~mf~~-~~~~~~~~Lrp~~~~ 385 (686)
T PLN02908 307 HELSPGSCFFLPHGARIYNKLMDFIREQYWERGYDEVITPNIYNMDLWETSGHAAHYKENMFVF-EIEKQEFGLKPMNCP 385 (686)
T ss_pred cCCCCcceEEechHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHHhhcCCccccchhccEE-ecCCeeEEEcCCCcH
Confidence 345689999999999999999999999999999999999999 22 34456688999998 778899999999999
Q ss_pred HHHHHHHhCC----CCceeEEEecCeeecCCCC-----CCCcceeEeEEEEeCCC-CccchH-HHHHHHHHHHHHcCCCC
Q 000993 812 PFIRWAISNQ----KSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGA-SALTEA-EVLKVTMDIVTRFFHAE 880 (1196)
Q Consensus 812 ~iaR~~a~~~----~~P~r~~Y~G~VfR~e~~~-----~~~~ef~Q~GvEiiG~~-~~~aDa-EvI~la~~~L~~lgi~~ 880 (1196)
+++++++.+. ..|+|+|++|++||+|.+. .|.|+|+|+++++||.. ...+|+ |++.++.++++.||+.
T Consensus 386 ~~~~~~~~~~~s~r~LPlr~~~~g~~fR~E~~~~l~Gl~RvReF~q~d~~if~~~~q~~~e~~~~l~~~~~v~~~lG~~- 464 (686)
T PLN02908 386 GHCLMFAHRVRSYRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCREDQIKDEVKGVLDFLDYVYEVFGFT- 464 (686)
T ss_pred HHHHHHhccccChhhCCHhHEEeeccccCCCCcCCcCccccccEEEeeEEEEcCHHHHHHHHHHHHHHHHHHHHHCCCc-
Confidence 9999988632 4699999999999998873 25567999999999995 457888 9999999999999994
Q ss_pred ceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcC
Q 000993 881 SCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCG 960 (1196)
Q Consensus 881 ~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g 960 (1196)
+.+.|+++. +.++..++..+.....+..+|++.++. +.. .. .-.++ .|
T Consensus 465 -~~~~ls~r~--~~~~g~~~~w~~ae~~l~~~ld~~~~~------~~~------------~~-------g~~af----yg 512 (686)
T PLN02908 465 -YELKLSTRP--EKYLGDLETWDKAEAALTEALNAFGKP------WQL------------NE-------GDGAF----YG 512 (686)
T ss_pred -EEEEEeCCc--cccCCCHHHHHHHHHHHHHHHHHcCCC------cEE------------CC-------Cceee----cc
Confidence 999999985 555443333333334456666654421 000 00 00011 12
Q ss_pred ChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCC--CCCCccceEEEEEecCCCCcccccccccccccc
Q 000993 961 AADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPP--IESYHRNLFFQVFSVKEKYPATLVEGTLLAVGG 1038 (1196)
Q Consensus 961 ~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvr--gl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GG 1038 (1196)
+.. +..+..++.++ ..+ ..+.+|+.+.. +++||| |....
T Consensus 513 pki------------d~~~~d~l~r~----~~~-~t~q~df~lp~~f~L~Y~~----e~~~~------------------ 553 (686)
T PLN02908 513 PKI------------DITVSDALKRK----FQC-ATVQLDFQLPIRFKLSYSA----EDEAK------------------ 553 (686)
T ss_pred cce------------EEEEEeccCCE----eec-cceeecccCHhhcCCEEEC----CCCCc------------------
Confidence 210 00111122221 001 13555655543 577777 11000
Q ss_pred ccchhhhhccccccccccCCCCCCCcceecc--cHHHHHhhccCC---CCCCCCCCCceEEEEEcCCCchHHHHHHHHHH
Q 000993 1039 RYDYLLHRMWDREYVGYASRTNPPSGVGASL--ALETIIQHYPVD---FKPVRNEAGTSVLVCSRGGGGLLVERMELVAE 1113 (1196)
Q Consensus 1039 RYD~L~~~fg~~~~~~~~g~~~~~pAvGfai--glerl~~~L~~~---~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~ 1113 (1196)
..+ ...+.-|+ ++||++.+|.++ ..+.+ .++.+|+|++.+ +....+|+++++.
T Consensus 554 -------------------~~~-pv~ihrai~GsiERli~iL~e~~~g~~p~w-lsp~qv~Vipv~-~~~~~~A~~va~~ 611 (686)
T PLN02908 554 -------------------IER-PVMIHRAILGSVERMFAILLEHYAGKWPFW-LSPRQAIVVPIS-EKSQDYAEEVRAQ 611 (686)
T ss_pred -------------------CCC-CEEEEeCceEhHHHHHHHHHHHcCCCCCCC-CCCceEEEEEEC-HHHHHHHHHHHHH
Confidence 000 01121112 799999988532 22222 357799999996 6778899999999
Q ss_pred HHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 000993 1114 LWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1187 (1196)
Q Consensus 1114 Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~ 1187 (1196)
||++|++|+++.. ++++++++++|++.|+++++++|++|.++|+|+||++++++|..++++++++.+++..++
T Consensus 612 LR~~Gi~vevd~~-~~~l~kkir~A~~~g~~~viivG~~E~~~~~V~vr~~~~~~q~~i~l~el~~~l~~~~~~ 684 (686)
T PLN02908 612 LHAAGFYVDVDVT-DRKIQKKVREAQLAQYNYILVVGEAEAATGTVNVRTRDNVVHGEKKIEELLTEFKEERAE 684 (686)
T ss_pred HHHCCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEECchHHhCCEEEEEECCCCceeeeeHHHHHHHHHHHHhh
Confidence 9999999998776 679999999999999999999999999999999999999999999999999999877653
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=325.94 Aligned_cols=261 Identities=22% Similarity=0.275 Sum_probs=175.6
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccC----CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLD----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
..++|++.+.||+|+||.||+|++..+ +..||||++..... .+....| .++...+.+++.++..+....
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~----~e~~~~e--~l~~~~~~~~~~~~~~~~~~~- 202 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA----VEIWMNE--RVRRACPNSCADFVYGFLEPV- 202 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch----hHHHHHH--HHHhhchhhHHHHHHhhhccc-
Confidence 458999999999999999999999988 89999998753221 1111111 223333444444433321100
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCC------------------
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH------------------ 515 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~------------------ 515 (1196)
.......+++||||++ ++|.+++.....
T Consensus 203 ---------------------------------~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~ 249 (566)
T PLN03225 203 ---------------------------------SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKG 249 (566)
T ss_pred ---------------------------------ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhcccc
Confidence 0123457899999997 589888864321
Q ss_pred --CCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecC-CCCeEEeccCcchhccccccccCCCCCCCCCCccccCc
Q 000993 516 --FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGT 592 (1196)
Q Consensus 516 --l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (1196)
.....+..++.||+.||+|||+++|+||||||+|||++. ++.+||+|||+|+.+.... .....
T Consensus 250 ~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~--------------~~~~~ 315 (566)
T PLN03225 250 LERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGI--------------NYIPK 315 (566)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeCCCCcEEEEeCCCcccccccc--------------ccCCc
Confidence 123456789999999999999999999999999999986 5799999999997543211 11123
Q ss_pred CccccccCCCchhccCCC---------------------CCCCcchhHHHHHHHHHhhcCCchhHH-HHHHHHHhhhcCC
Q 000993 593 GQVGTYFYTAPEIEQGWP---------------------KIDEKADMYSLGIVFFELWHPFSTAME-RQIVLSDLKQKGE 650 (1196)
Q Consensus 593 ~~~GT~~Y~APE~l~~~~---------------------~~s~ksDVwSlGviLyELltPf~~~~~-~~~~~~~l~~~~~ 650 (1196)
..++|+.|||||++.... .++.++|||||||+||||++|...... .......+.....
T Consensus 316 ~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~ 395 (566)
T PLN03225 316 EFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDY 395 (566)
T ss_pred ccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCC
Confidence 467899999999764311 244567999999999999985432222 1111111111110
Q ss_pred ------------CCCccc-------cCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 651 ------------LPPSWV-------AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 651 ------------~p~~~~-------~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
..+... .......+||++||+.||.+|||+.++|+||||....
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~ 457 (566)
T PLN03225 396 DLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREG 457 (566)
T ss_pred cHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCC
Confidence 000000 0112345899999999999999999999999998754
|
|
| >PRK09194 prolyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-30 Score=315.89 Aligned_cols=434 Identities=12% Similarity=0.107 Sum_probs=275.6
Q ss_pred cCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecC--CCcccccceEEEeecCCceEeecCCCcH
Q 000993 738 NRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG--DCPQFKRNTVKLLTHGGDLLELSHELRL 811 (1196)
Q Consensus 738 ~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~--~~~~~~~~my~f~D~~G~~laLRPD~T~ 811 (1196)
.+.++|+++|+|.+++++++|++.+++.++++||++|.||.| ++.. +.+...++||+|.|++|+.++|||+.+.
T Consensus 33 ~~~~~G~~~~lP~g~~~~~~i~~~i~~~~~~~G~~ei~~P~l~~~~l~~~sg~~~~~~~emf~~~d~~~~~l~LrPt~e~ 112 (565)
T PRK09194 33 RKLASGIYTYLPLGLRVLRKIENIVREEMNKIGAQEVLMPALQPAELWQESGRWEEYGPELLRLKDRHGRDFVLGPTHEE 112 (565)
T ss_pred cccCCCeeEECccHHHHHHHHHHHHHHHHHHcCCEEEECcccCcHHHHhhcCCccccchhceEEecCCCCEEEECCCChH
Confidence 457899999999999999999999999999999999999999 3332 3566788999999999999999997776
Q ss_pred HHHHHHHh----CCCCceeEEEecCeeecC-CCCCC---CcceeEeEEEEeCCCCccchH---HHHHHHHHHHHHcCCCC
Q 000993 812 PFIRWAIS----NQKSSFKRYEISSVYRRA-IGHSP---PNRYLQGDFDIIGGASALTEA---EVLKVTMDIVTRFFHAE 880 (1196)
Q Consensus 812 ~iaR~~a~----~~~~P~r~~Y~G~VfR~e-~~~~~---~~ef~Q~GvEiiG~~~~~aDa---EvI~la~~~L~~lgi~~ 880 (1196)
+++.++.. ++..|+|+||+|++||+| +|+.| .+||+|.|+++||.++..+|+ +++.++.++|+.||+.
T Consensus 113 ~~~~~~~~~~~s~~~LP~r~yqi~~~fR~E~rp~~Gl~R~reF~q~d~~~f~~~~~~a~~~~~~~~~~~~~i~~~lgl~- 191 (565)
T PRK09194 113 VITDLVRNEIKSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADEESLDETYDAMYQAYSRIFDRLGLD- 191 (565)
T ss_pred HHHHHHHhhhhhcccCCeEEEEeeCCccCCCCCCCcccccccEEEeeEEEEcCChHHHHHHHHHHHHHHHHHHHHhCCc-
Confidence 66554443 345799999999999998 88865 456999999999999888898 6677779999999993
Q ss_pred ceEEEeCcHHHHHHHH------------------HHcCCCHHHHHHHHHHHHHhc---CCCCCcccccccHHHHHHHHHH
Q 000993 881 SCDIHLNHGDLLEAIW------------------SWAGIKAEHREKVAELLAMMG---SLRPQSSEWKSKWVVIRRQLLQ 939 (1196)
Q Consensus 881 ~~~i~Lg~~~i~~~~l------------------~~lgl~~~~~~~l~~~l~~~d---~~~~~~~~~k~~~~~~~~~~~~ 939 (1196)
|.+.+++++.+.+.. ..|+.......+....-...+ .+.........+. .++..
T Consensus 192 -~~~~~~~~g~~gg~~s~e~~~~~~~g~~~~~~c~~c~~~~n~e~a~~~~~~~~~~~~~~~~v~~p~~~t~----~e~a~ 266 (565)
T PRK09194 192 -FRAVEADSGAIGGSASHEFMVLADSGEDTIVYSDESDYAANIEKAEALPPPRAAAEEALEKVDTPNAKTI----EELAE 266 (565)
T ss_pred -cEEEEcccccCCCceeEEEEEecCCCceEEEEeCCCCcchhhhhhcccCCCCccccccceeecCCCCCcH----HHHHH
Confidence 999988866654432 122221111110000000000 0000000000011 12222
Q ss_pred hcCCcHHHHHH--H----HHH-HHHhcCChhhHHHHHhccCCCC---hHHHHHHHHH------HHHHcCCC--ceEEEcC
Q 000993 940 ELNLAEAVVNR--L----QTV-GLRFCGAADQALPRLRGALPAD---KPTRKALDEL------YLRIWRIE--KNIYIDA 1001 (1196)
Q Consensus 940 ~~~l~~~~~~~--l----~~l-~~~~~g~~~~~l~~l~~~~~~~---~~~~~~l~~L------~l~~~g~~--~~i~~Dl 1001 (1196)
..+++....-+ + ..+ +..+.|+..--+.++++.+... ....+.+.++ .+.-+|.. -.+.+|.
T Consensus 267 ~lg~~~~~~~KtLi~~~~~~~~lvvvp~d~~vn~~kl~~~lg~~~l~~a~~eel~~~~g~~~G~v~P~Gl~~~v~viiD~ 346 (565)
T PRK09194 267 FLNVPAEKTVKTLLVKADGELVAVLVRGDHELNEVKLENLLGAAPLELATEEEIRAALGAVPGFLGPVGLPKDVPIIADR 346 (565)
T ss_pred HhCCCHHHeeEEEEEEeCCeEEEEEeecchhhhHHHHHhhcCCcccccCCHHHHHHhhCCCCCccCcccCCCCceEEEec
Confidence 23332221000 0 000 0012333333344444433211 0111222222 11222221 2577888
Q ss_pred CCCCCCCCccce-----EEEEEe-----------------cCCCCccc--------ccccc-ccccccccchhhhhcccc
Q 000993 1002 LMPPIESYHRNL-----FFQVFS-----------------VKEKYPAT--------LVEGT-LLAVGGRYDYLLHRMWDR 1050 (1196)
Q Consensus 1002 ~lvrgl~YYTG~-----vFe~~~-----------------~~~~~~~~--------~~~~~-~I~~GGRYD~L~~~fg~~ 1050 (1196)
++...-++|+|- -|.... .+...|.- .-+.+ ..--|=+|-. .|+..
T Consensus 347 sl~~~~~~~~gan~~g~h~~~~~~~~d~~~~~~~d~~~~~~g~~c~~c~~~l~~~~~iEvGh~f~lG~~ys~---~~~~~ 423 (565)
T PRK09194 347 SVADMSNFVVGANEDDYHYVGVNWGRDFPVPEVADLRNVVEGDPSPDGGGTLKIARGIEVGHIFQLGTKYSE---AMNAT 423 (565)
T ss_pred cccccccccccCCCCCceeeCCccCcCCCcccccchhhhhcCCCCCCCCceeEEeeeEEEEEEecCCcchhh---ccCCE
Confidence 877766666551 110000 00111100 00111 1123555553 24321
Q ss_pred ccccccCCCCCCCcceecccHHHHHhhccC------CCCCCCCCCCceEEEEEcC--CCchHHHHHHHHHHHHHcCCeEE
Q 000993 1051 EYVGYASRTNPPSGVGASLALETIIQHYPV------DFKPVRNEAGTSVLVCSRG--GGGLLVERMELVAELWEENIKAQ 1122 (1196)
Q Consensus 1051 ~~~~~~g~~~~~pAvGfaiglerl~~~L~~------~~~~~~~~~~~~vlv~~~~--~~~~~~~a~~~a~~Lr~~Gi~ve 1122 (1196)
+...-|+.+.+.-..|+||++||+.++.+ +...+...+|.+|+|++.+ +++...+|.++++.||+.|++|.
T Consensus 424 -~~~~~g~~~~~~m~~~gIGv~Rli~al~e~~~d~~gl~~P~~iaP~~v~Iv~~~~~~~~~~~~a~~i~~~L~~~gi~v~ 502 (565)
T PRK09194 424 -VLDENGKAQPLIMGCYGIGVSRLVAAAIEQNHDEKGIIWPKAIAPFDVHIVPVNMKDEEVKELAEKLYAELQAAGIEVL 502 (565)
T ss_pred -EECCCCCEEeEEEeeEechHHHHHHHHHHhhccccCccCCCccCCceEEEEECCCCcHHHHHHHHHHHHHHhccCCeEE
Confidence 12223333333345679999999888752 3233344678899999984 23467889999999999999999
Q ss_pred EeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHH
Q 000993 1123 FVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLL 1182 (1196)
Q Consensus 1123 l~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~ 1182 (1196)
+++. +.++++++++|+..|+|++|+||++|+++|+|+||++.+|+|..++++++++.+.
T Consensus 503 ~Ddr-~~~~g~k~~~ad~~GiP~~iiiG~~e~~~~~v~v~~r~~ge~~~v~~~~l~~~i~ 561 (565)
T PRK09194 503 LDDR-KERPGVKFADADLIGIPHRIVVGDRGLAEGIVEYKDRRTGEKEEVPVDELVEFLK 561 (565)
T ss_pred EECC-CCCHHHHHHHHHhcCCCEEEEEcCccccCCeEEEEECCCCceEEEeHHHHHHHHH
Confidence 8877 6799999999999999999999999999999999999999999999999988876
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-31 Score=317.05 Aligned_cols=247 Identities=34% Similarity=0.495 Sum_probs=191.3
Q ss_pred EeeeccCCcEE-EEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCCCCcC
Q 000993 386 LQPLGHGGFGH-VVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMW 463 (1196)
Q Consensus 386 ~~~LG~G~fG~-Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~~~~~ 463 (1196)
-+.+|.|+.|+ ||+|... |+.||||.+-. +...-..+|+..|+.- .|||||++|+. |
T Consensus 514 ~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~-----e~~~~A~rEi~lL~eSD~H~NviRyyc~--E------------ 572 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVYE--GREVAVKRLLE-----EFFDFAQREIQLLQESDEHPNVIRYYCS--E------------ 572 (903)
T ss_pred HHHcccCCCCcEEEEEeeC--CceehHHHHhh-----HhHHHHHHHHHHHHhccCCCceEEEEee--c------------
Confidence 35689999997 7999886 99999997642 2234567999999988 69999999854 2
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCC---HHHHHHHHHHHHHHHHHHHhCC
Q 000993 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFD---KELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 464 ~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~---e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
++..++||..|.|..+|.+++... ..+. .-..+..+.|+++||+|||+.+
T Consensus 573 --------------------------~d~qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~ 626 (903)
T KOG1027|consen 573 --------------------------QDRQFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK 626 (903)
T ss_pred --------------------------cCCceEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc
Confidence 356789999999999999999874 1111 1345788999999999999999
Q ss_pred CcccCCCcCcEEecC---CC--CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 540 IIHRDLTPNNIFFDA---RN--DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 540 IiHrDLKp~NILld~---~~--~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||||||||+||||+. ++ .++|+|||+++.+..... .+++ ..+..||-+|+|||++.. ..-+.
T Consensus 627 iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~s-----------S~~r-~s~~sGt~GW~APE~L~~-~~~~~ 693 (903)
T KOG1027|consen 627 IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKS-----------SFSR-LSGGSGTSGWQAPEQLRE-DRKTQ 693 (903)
T ss_pred cccccCCCceEEEEccCCCcceeEEecccccccccCCCcc-----------hhhc-ccCCCCcccccCHHHHhc-cccCc
Confidence 999999999999976 33 589999999998754321 1111 456689999999999998 44577
Q ss_pred cchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 615 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 615 ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
++|||||||++|+.++ ||.....++..+ +.....+..-....-.++.+||.+|++++|..||+|.++|.||+|-
T Consensus 694 avDiFslGCvfyYvltgG~HpFGd~~~R~~NI--l~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW 771 (903)
T KOG1027|consen 694 AVDIFSLGCVFYYVLTGGSHPFGDSLERQANI--LTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFW 771 (903)
T ss_pred ccchhhcCceEEEEecCCccCCCchHHhhhhh--hcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccC
Confidence 9999999999999985 999887766532 2222222111011011889999999999999999999999999987
Q ss_pred CchH
Q 000993 691 QMEY 694 (1196)
Q Consensus 691 ~~~~ 694 (1196)
..+.
T Consensus 772 ~~ek 775 (903)
T KOG1027|consen 772 DSEK 775 (903)
T ss_pred ChHH
Confidence 7654
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=294.89 Aligned_cols=251 Identities=26% Similarity=0.392 Sum_probs=191.7
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCC--CC----eeeeeeeeee
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH--QH----VVRYYQAWFE 451 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~H--pn----IV~l~~~~~e 451 (1196)
...++|.++..+|+|.||.|..|.+..++..||||+++.-. ...+...-|+.+|.++.+ |+ +|++.++|
T Consensus 86 ~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~---kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wF-- 160 (415)
T KOG0671|consen 86 ILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD---KYREAALIEIEVLQKINESDPNGKFRCVQMRDWF-- 160 (415)
T ss_pred ccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH---HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhh--
Confidence 34688999999999999999999999999999999987322 234456679999999932 22 33333322
Q ss_pred cCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc--CCCCHHHHHHHHHHHH
Q 000993 452 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIV 529 (1196)
Q Consensus 452 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~qIa 529 (1196)
....+.+||+|.++.|+.+++..+ .+|+..+++.++.|++
T Consensus 161 --------------------------------------dyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~ 202 (415)
T KOG0671|consen 161 --------------------------------------DYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLL 202 (415)
T ss_pred --------------------------------------hccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHH
Confidence 235678999999999999999765 4699999999999999
Q ss_pred HHHHHHHhCCCcccCCCcCcEEecCC--------------------CCeEEeccCcchhccccccccCCCCCCCCCCccc
Q 000993 530 EGLAHIHGQGIIHRDLTPNNIFFDAR--------------------NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV 589 (1196)
Q Consensus 530 ~gL~yLHs~gIiHrDLKp~NILld~~--------------------~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~ 589 (1196)
++++|||+++++|-||||+|||+.+. ..+||+|||.|++-..
T Consensus 203 ~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e------------------ 264 (415)
T KOG0671|consen 203 ESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHE------------------ 264 (415)
T ss_pred HHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceecc------------------
Confidence 99999999999999999999998432 2489999999986321
Q ss_pred cCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhcC---CchhHHHHH--HHHHhhhcCCCCCccc--------
Q 000993 590 DGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHP---FSTAMERQI--VLSDLKQKGELPPSWV-------- 656 (1196)
Q Consensus 590 ~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELltP---f~~~~~~~~--~~~~l~~~~~~p~~~~-------- 656 (1196)
.++..+.|..|.|||++.+ -.++..+||||+||||+|++++ |....+.+. .++.+ .+++|....
T Consensus 265 ~hs~iVsTRHYRAPEViLg-LGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerI--lGp~P~~mi~r~~~~Ky 341 (415)
T KOG0671|consen 265 HHSTIVSTRHYRAPEVILG-LGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERI--LGPIPSRMIKKTRKEKY 341 (415)
T ss_pred CcceeeeccccCCchheec-cCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHh--hCCCcHHHhhhhhhHhh
Confidence 2356689999999999999 4589999999999999999874 333333221 11111 111111000
Q ss_pred --------------------------------cCC---HHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 657 --------------------------------AKF---SEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 657 --------------------------------~~~---~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
... -++.+||++||..||.+|+|+.|+|+||||...
T Consensus 342 f~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 342 FRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARL 412 (415)
T ss_pred hhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcC
Confidence 000 135699999999999999999999999999864
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=293.31 Aligned_cols=249 Identities=25% Similarity=0.412 Sum_probs=187.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHh--cCCCCeeeeeeeeeecCcccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR--LQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~--L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
+....+.+.||+|.||.||+|... ++.||||+++.. ..+.+..|-.+.+. +.|+||++++++= +.+
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~~-----~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~e-kr~---- 276 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPEQ-----EKQSFQNEKNIYSLPGMKHENILQFIGAE-KRG---- 276 (534)
T ss_pred CCchhhHHHhhcCccceeehhhcc--CceeEEEecCHH-----HHHHHHhHHHHHhccCccchhHHHhhchh-ccC----
Confidence 456677889999999999999886 799999999743 34456666666554 5899999998652 100
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
......++||++|.+ |+|.++|.. ..+++....+++..+++||+|||
T Consensus 277 -------------------------------t~~~~eywLVt~fh~kGsL~dyL~~-ntisw~~~cria~SmarGLa~LH 324 (534)
T KOG3653|consen 277 -------------------------------TADRMEYWLVTEFHPKGSLCDYLKA-NTISWNSLCRIAESMARGLAHLH 324 (534)
T ss_pred -------------------------------CccccceeEEeeeccCCcHHHHHHh-ccccHHHHHHHHHHHHHHHHHhc
Confidence 012446799999997 799999975 45899999999999999999999
Q ss_pred hC---------CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 537 GQ---------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 537 s~---------gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
+. .|+|||||++|||+.+|+++.|+|||+|..+.... . .-+..+.+||.+|||||+|.
T Consensus 325 ee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~-~------------~~d~~~qVGT~RYMAPEvLE 391 (534)
T KOG3653|consen 325 EELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGK-P------------QGDTHGQVGTRRYMAPEVLE 391 (534)
T ss_pred ccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCC-C------------CcchhhhhhhhhhcCHHHHh
Confidence 63 59999999999999999999999999999875221 1 11234479999999999998
Q ss_pred CCCCCC-----CcchhHHHHHHHHHhhc---------------CCchh-------HHHHHHHHHhhhcCCCCCccccCC-
Q 000993 608 GWPKID-----EKADMYSLGIVFFELWH---------------PFSTA-------MERQIVLSDLKQKGELPPSWVAKF- 659 (1196)
Q Consensus 608 ~~~~~s-----~ksDVwSlGviLyELlt---------------Pf~~~-------~~~~~~~~~l~~~~~~p~~~~~~~- 659 (1196)
|.-++. .+.||||+|.+||||++ ||... .+++...-.-+..+.+|..|....
T Consensus 392 gainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~ 471 (534)
T KOG3653|consen 392 GAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAG 471 (534)
T ss_pred hhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCcc
Confidence 843333 36899999999999973 33211 112222222233455666676542
Q ss_pred -HHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 660 -SEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 660 -~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
.-+++.+..||+.||+.|.|+.=+-+
T Consensus 472 ~~~l~et~EeCWDhDaeARLTA~Cv~e 498 (534)
T KOG3653|consen 472 MAVLCETIEECWDHDAEARLTAGCVEE 498 (534)
T ss_pred HHHHHHHHHHHcCCchhhhhhhHHHHH
Confidence 35689999999999999999765543
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-31 Score=310.19 Aligned_cols=270 Identities=26% Similarity=0.460 Sum_probs=220.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|+++..+|.|+||.||+++++.+++..|+|++++... ....-+..|+-+++..+|||||.|++.+..
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~--dd~~~iqqei~~~~dc~h~nivay~gsylr--------- 83 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPG--DDFSGIQQEIGMLRDCRHPNIVAYFGSYLR--------- 83 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCC--ccccccccceeeeecCCCcChHHHHhhhhh---------
Confidence 799999999999999999999999999999999987543 234557789999999999999999988742
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+||.||||+ |+|.+..+-.+++++-++....+..+.||+|||+.|
T Consensus 84 -------------------------------~dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~g 132 (829)
T KOG0576|consen 84 -------------------------------RDKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQG 132 (829)
T ss_pred -------------------------------hcCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCC
Confidence 456899999997 599999988899999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhc--cCCCCCCCcch
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE--QGWPKIDEKAD 617 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l--~~~~~~s~ksD 617 (1196)
=+|||||-.|||+++.|.+|++|||.+..+... -....++.|||.|||||+- ...+.|+..+|
T Consensus 133 k~hRdiKGanilltd~gDvklaDfgvsaqitat---------------i~KrksfiGtpywmapEvaaverkggynqlcd 197 (829)
T KOG0576|consen 133 KIHRDIKGANILLTDEGDVKLADFGVSAQITAT---------------IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCD 197 (829)
T ss_pred cccccccccceeecccCceeecccCchhhhhhh---------------hhhhhcccCCccccchhHHHHHhccccccccc
Confidence 999999999999999999999999999765311 1235678999999999974 33356999999
Q ss_pred hHHHHHHHHHhh--c-CCchhHHHHHHHHHhhhcCCCCCcc---ccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 618 MYSLGIVFFELW--H-PFSTAMERQIVLSDLKQKGELPPSW---VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 618 VwSlGviLyELl--t-Pf~~~~~~~~~~~~l~~~~~~p~~~---~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
+|++|+...|+- + |....+++....-.-. .+..||.. ...++.+-+|++.+|.++|++||+++.+|+|+|..+
T Consensus 198 iwa~gitAiel~eLqpplfdlhpmr~l~LmTk-S~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~ 276 (829)
T KOG0576|consen 198 IWALGITAIELGELQPPLFDLHPMRALFLMTK-SGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ 276 (829)
T ss_pred ccccccchhhhhhcCCcccccchHHHHHHhhc-cCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence 999999999985 3 6556666555433322 33334322 334567889999999999999999999999998776
Q ss_pred c-hHHHHHHHHHhcCCCC
Q 000993 692 M-EYELLDNILRMMHSSE 708 (1196)
Q Consensus 692 ~-~~~~~~~~~~~~~~~~ 708 (1196)
. .....-.++....+++
T Consensus 277 ~l~~rl~~eLLdK~n~P~ 294 (829)
T KOG0576|consen 277 TLSRRLAIELLDKVNNPN 294 (829)
T ss_pred chhhHHHHHHHHHccCCC
Confidence 5 3334445566666655
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-31 Score=309.99 Aligned_cols=246 Identities=30% Similarity=0.443 Sum_probs=186.5
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
-+..-+.||+|+||.||+++++.+|+.||||.++... .....+...+|+++|++++|||||++++.= ++
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~ie-e~--------- 82 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIE-ET--------- 82 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccC-Cc---------
Confidence 3455678999999999999999999999999987543 445677889999999999999999998652 10
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY---DHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~---~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
... | .-...-.++||||. |||+..+++. ..+++.+.+.++.+++.||.|||.
T Consensus 83 ~~~-~-----------------------~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrE 138 (732)
T KOG4250|consen 83 KFL-G-----------------------LVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRE 138 (732)
T ss_pred ccc-C-----------------------cccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 000 0 01233479999996 6999999753 469999999999999999999999
Q ss_pred CCCcccCCCcCcEEec--CCC--CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 538 QGIIHRDLTPNNIFFD--ARN--DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld--~~~--~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
+||+||||||.||++- .+| .-||+|||.|+-+..+. ..++.+||+.|.+||.+.....|+
T Consensus 139 n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s----------------~~~S~vGT~~YLhPel~E~q~~y~ 202 (732)
T KOG4250|consen 139 NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS----------------LFTSLVGTEEYLHPELYERQKKYT 202 (732)
T ss_pred cCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC----------------eeeeecCchhhcChHHHhhccCcC
Confidence 9999999999999984 334 37999999999765332 236789999999999998546799
Q ss_pred CcchhHHHHHHHHHhhc---CCchhH----HHHHHHHHhhhcCC-------------------CCCccccCCH----HHH
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGE-------------------LPPSWVAKFS----EQE 663 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~----~~~~~~~~l~~~~~-------------------~p~~~~~~~~----~l~ 663 (1196)
..+|.|||||++|++.| ||.+.. ..++...++..+.. +|. ....++ .+.
T Consensus 203 ~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~-p~~Ls~~l~~~~~ 281 (732)
T KOG4250|consen 203 ATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQ-PNHLSRGLATRLT 281 (732)
T ss_pred ceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCC-cccccHHHHhhhh
Confidence 99999999999999998 664332 22233333222111 121 112222 345
Q ss_pred HHHHHcccCCCCCCCC
Q 000993 664 SLLRRLMSPSPSDRPS 679 (1196)
Q Consensus 664 ~LI~~cL~~dP~~RPt 679 (1196)
.++..+|..+|.+|..
T Consensus 282 kwLa~~L~~~~~~~~~ 297 (732)
T KOG4250|consen 282 KWLASMLEWNPRKRGH 297 (732)
T ss_pred HHHHHHHhhhHHHhCC
Confidence 7888899999999984
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-31 Score=293.18 Aligned_cols=263 Identities=28% Similarity=0.435 Sum_probs=206.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc-----hhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-----PVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-----~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
++|-++..||+|||++||+|-+....+.||||+-.+..... .......+|..+.+.|+||.||++|++|-
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfs----- 537 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFS----- 537 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeee-----
Confidence 45778889999999999999999889999999865443211 12345779999999999999999999872
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
.+...+|-|+|||+| +|.-+|.....+++.+++.|+.||+.||.|
T Consensus 538 ----------------------------------lDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~Y 583 (775)
T KOG1151|consen 538 ----------------------------------LDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKY 583 (775)
T ss_pred ----------------------------------eccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 234567899999987 898899999999999999999999999999
Q ss_pred HHhC--CCcccCCCcCcEEecC---CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC-
Q 000993 535 IHGQ--GIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG- 608 (1196)
Q Consensus 535 LHs~--gIiHrDLKp~NILld~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~- 608 (1196)
|... .|||.||||.|||+-+ -|.+||+|||+++........... +.. -++-..||.+|++||.+.-
T Consensus 584 LNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vd-------Gme-LTSQgAGTYWYLPPEcFvVg 655 (775)
T KOG1151|consen 584 LNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVD-------GME-LTSQGAGTYWYLPPECFVVG 655 (775)
T ss_pred HhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCccc-------cee-eecccCceeeecCcceeecC
Confidence 9987 5999999999999954 377999999999987544322110 110 1234579999999997642
Q ss_pred --CCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhh---h-cCCCCCccccCCHHHHHHHHHcccCCCCCCCC
Q 000993 609 --WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLK---Q-KGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 679 (1196)
Q Consensus 609 --~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~---~-~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt 679 (1196)
.+..+.|+||||+|||+|.++. ||......+..+.... . ...+|+. +..+++++.+|++||+..-.+|..
T Consensus 656 kePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~K-PvVsseAkaFIRRCLaYRKeDR~D 734 (775)
T KOG1151|consen 656 KEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPK-PVVSSEAKAFIRRCLAYRKEDRID 734 (775)
T ss_pred CCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCC-CccCHHHHHHHHHHHHhhhhhhhh
Confidence 3568999999999999999996 9986655544433211 1 2234443 456789999999999999999999
Q ss_pred HHHHHhccCCCC
Q 000993 680 ATELLQDALPPQ 691 (1196)
Q Consensus 680 a~eiL~~~~~~~ 691 (1196)
..++..||++..
T Consensus 735 V~qLA~dpyllP 746 (775)
T KOG1151|consen 735 VQQLACDPYLLP 746 (775)
T ss_pred HHHHccCccccc
Confidence 999999987653
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9e-32 Score=282.88 Aligned_cols=262 Identities=27% Similarity=0.390 Sum_probs=203.9
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
+.+--+.||-|+||.||.+.+..+|+.||+|++..-..+.....++.+|+++|..++|.|++..++...-. ..
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPp-h~------ 126 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPA-NP------ 126 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCC-Cc------
Confidence 33444789999999999999999999999999876656666678899999999999999999887654110 00
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCc
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 541 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIi 541 (1196)
.--..+|++.|++..+|..++.+...++.+.+.-+++||++||.|||+.+|.
T Consensus 127 ----------------------------dfFqEiYV~TELmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~IL 178 (449)
T KOG0664|consen 127 ----------------------------SFFQELYVLTELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANIL 178 (449)
T ss_pred ----------------------------hHHHHHHHHHHHHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchh
Confidence 0012368899999999999999889999999999999999999999999999
Q ss_pred ccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHH
Q 000993 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621 (1196)
Q Consensus 542 HrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSl 621 (1196)
||||||.|+|++++..+||||||+|+.....+ +..++..+-|..|.|||++.|...|+.+.||||.
T Consensus 179 HRDIKPGNLLVNSNCvLKICDFGLARvee~d~--------------~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSV 244 (449)
T KOG0664|consen 179 HRDIKPGNLLVNSNCILKICDFGLARTWDQRD--------------RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSV 244 (449)
T ss_pred hccCCCccEEeccCceEEecccccccccchhh--------------hhhhHHHHHHHHhccHHHhhcchhhcCccceehh
Confidence 99999999999999999999999998643221 2345556789999999999998899999999999
Q ss_pred HHHHHHhhc---CCchhHHHHH----------------------HHHHhhhcCCCCCcccc---------CCHHHHHHHH
Q 000993 622 GIVFFELWH---PFSTAMERQI----------------------VLSDLKQKGELPPSWVA---------KFSEQESLLR 667 (1196)
Q Consensus 622 GviLyELlt---Pf~~~~~~~~----------------------~~~~l~~~~~~p~~~~~---------~~~~l~~LI~ 667 (1196)
|||+.||+. -|....+-+. ....+...+..+|+... ...+...++.
T Consensus 245 GCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~ 324 (449)
T KOG0664|consen 245 GCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQ 324 (449)
T ss_pred hHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHH
Confidence 999999973 2221111110 01111122222332221 1235678999
Q ss_pred HcccCCCCCCCCHHHHHhccCCCCc
Q 000993 668 RLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
.++..||++|.+.++.+.|++....
T Consensus 325 ~~l~~d~dkris~~~A~~~~~~~e~ 349 (449)
T KOG0664|consen 325 KLLHFDPDKRISVEEALQHRYLEEG 349 (449)
T ss_pred HHhCCCCcccccHhhhccccccccc
Confidence 9999999999999999999876554
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-29 Score=274.30 Aligned_cols=238 Identities=34% Similarity=0.550 Sum_probs=193.4
Q ss_pred CcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCCcccccc
Q 000993 393 GFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASST 472 (1196)
Q Consensus 393 ~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~ 472 (1196)
+||.||+|.+..+|+.+|+|++........ ...+.+|+..++.++|+||+++++.+..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~--------------------- 58 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFED--------------------- 58 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheee---------------------
Confidence 689999999998899999999875443321 5789999999999999999999987632
Q ss_pred cccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEE
Q 000993 473 FSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 551 (1196)
Q Consensus 473 ~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NIL 551 (1196)
....+++|||+++ +|..++.....++...++.++.+++.++.|||+.+++|+||+|+||+
T Consensus 59 -------------------~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~ 119 (244)
T smart00220 59 -------------------EDKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENIL 119 (244)
T ss_pred -------------------CCEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeE
Confidence 2467999999986 99999987766999999999999999999999999999999999999
Q ss_pred ecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc-
Q 000993 552 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH- 630 (1196)
Q Consensus 552 ld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt- 630 (1196)
++.++.++|+|||.+....... ......++..|+|||.+.+ ..++.++|+||||+++|+|++
T Consensus 120 ~~~~~~~~l~d~~~~~~~~~~~----------------~~~~~~~~~~~~~pE~~~~-~~~~~~~Di~slG~~l~~l~~~ 182 (244)
T smart00220 120 LDEDGHVKLADFGLARQLDPGG----------------LLTTFVGTPEYMAPEVLLG-KGYGKAVDVWSLGVILYELLTG 182 (244)
T ss_pred ECCCCcEEEccccceeeecccc----------------ccccccCCcCCCCHHHHcc-CCCCchhhHHHHHHHHHHHHhC
Confidence 9999999999999998654221 1234568889999999886 567889999999999999996
Q ss_pred --CCchhHHHHHHHHHhhhcCCCCC--ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 631 --PFSTAMERQIVLSDLKQKGELPP--SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 631 --Pf~~~~~~~~~~~~l~~~~~~p~--~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
||.............. ....+. .....+.++.+++.+||..+|++||++.++++|+|+
T Consensus 183 ~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 183 KPPFPGDDQLLELFKKIG-KPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred CCCCCCCCcHHHHHHHHh-ccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 7765333333333332 222221 211156789999999999999999999999999986
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=282.45 Aligned_cols=256 Identities=27% Similarity=0.381 Sum_probs=199.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.+|.-++.+|.|.- .|..|-+...++.||+|++..........++..+|..++..++|+||++++.+|.-.
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~-------- 87 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQ-------- 87 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCcc--------
Confidence 45666788999988 788888888999999999876665566677899999999999999999999887321
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
........+|+|||||..+|.+.+. -.++...+.+++.|++.|+.|||+.||
T Consensus 88 --------------------------~~l~~~~e~y~v~e~m~~nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~I 139 (369)
T KOG0665|consen 88 --------------------------KTLEEFQEVYLVMELMDANLCQVIL--MELDHETISYILYQMLCGIKHLHSAGI 139 (369)
T ss_pred --------------------------ccHHHHHhHHHHHHhhhhHHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcce
Confidence 2223345689999999999999887 447788899999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+||||||+||++..++.+||.|||+|+.- +..+..+..+.|..|.|||++.+.+ |...+||||
T Consensus 140 ihRdLkPsnivv~~~~~lKi~dfg~ar~e----------------~~~~~mtpyVvtRyyrapevil~~~-~ke~vdiwS 202 (369)
T KOG0665|consen 140 IHRDLKPSNIVVNSDCTLKILDFGLARTE----------------DTDFMMTPYVVTRYYRAPEVILGMG-YKENVDIWS 202 (369)
T ss_pred eecccCcccceecchhheeeccchhhccc----------------CcccccCchhheeeccCchheeccC-Ccccchhhh
Confidence 99999999999999999999999999752 1224567789999999999999954 999999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHH--------------HHh--------h---------hcCCCCC-ccc-------cC
Q 000993 621 LGIVFFELWH---PFSTAMERQIVL--------------SDL--------K---------QKGELPP-SWV-------AK 658 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~--------------~~l--------~---------~~~~~p~-~~~-------~~ 658 (1196)
+||++.||++ -|.+.+...... ..+ + ....+|. .|. ..
T Consensus 203 vGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~ 282 (369)
T KOG0665|consen 203 VGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLD 282 (369)
T ss_pred hhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccc
Confidence 9999999974 122111111000 000 0 0001111 111 11
Q ss_pred CHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 659 FSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 659 ~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
..-+++|+.+||-.||++|.+++++|+||+++
T Consensus 283 ~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 283 CSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred hHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 23468999999999999999999999999887
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.4e-29 Score=297.75 Aligned_cols=265 Identities=18% Similarity=0.237 Sum_probs=180.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEc----------------cCCcEEEEEEEecCCCCchhHHH--------------HH
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNK----------------LDGRHYAVKKIRLKDKSLPVNDR--------------IL 428 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~----------------~~g~~vAVK~i~~~~~~~~~~~~--------------~~ 428 (1196)
..++|++.++||+|+||.||+|.+. ..++.||||.+..... ...++ ..
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~--~~~~~fl~e~~~~~~~~e~~~ 220 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQ--GVRQDFLKTGTLAKGSAETGM 220 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccch--hhHHHHHhhhhhhhcccchhH
Confidence 4689999999999999999999752 2456899999865322 11222 33
Q ss_pred HHHHHHHhcCCCCe-----eeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC
Q 000993 429 REVATLSRLQHQHV-----VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP 503 (1196)
Q Consensus 429 ~Ev~iL~~L~HpnI-----V~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~ 503 (1196)
.|+..+.+++|.++ ++++++|.... .+........|+||||++
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~--------------------------------~~g~~~~~~~~LV~Ey~~ 268 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNT--------------------------------ADGAFTKGSQWLVWKFES 268 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhccccc--------------------------------ccccccCCceEEEEEcCC
Confidence 46666777766554 44454442110 011112345799999997
Q ss_pred -CCHHHHHhhc------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCe
Q 000993 504 -RTLRQVFESY------------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558 (1196)
Q Consensus 504 -gsL~~~l~~~------------------------~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~v 558 (1196)
++|.++++.. ..+++..++.++.|++.||+|||+++|+||||||+|||++.++.+
T Consensus 269 ~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~ 348 (507)
T PLN03224 269 DATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQV 348 (507)
T ss_pred CCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcE
Confidence 5898887532 124567788999999999999999999999999999999999999
Q ss_pred EEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC-------------------C--CCcch
Q 000993 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK-------------------I--DEKAD 617 (1196)
Q Consensus 559 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-------------------~--s~ksD 617 (1196)
||+|||+++...... ........+|+.|+|||.+..... | ..+.|
T Consensus 349 kL~DFGla~~~~~~~--------------~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~D 414 (507)
T PLN03224 349 KIIDFGAAVDMCTGI--------------NFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFD 414 (507)
T ss_pred EEEeCcCccccccCC--------------ccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccc
Confidence 999999997542110 011122345899999998764211 1 23579
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHH-------HHHhh---hcCCCCCccccCCHHHHHHHHHcccCCC---CCCCCH
Q 000993 618 MYSLGIVFFELWH----PFSTAMERQIV-------LSDLK---QKGELPPSWVAKFSEQESLLRRLMSPSP---SDRPSA 680 (1196)
Q Consensus 618 VwSlGviLyELlt----Pf~~~~~~~~~-------~~~l~---~~~~~p~~~~~~~~~l~~LI~~cL~~dP---~~RPta 680 (1196)
|||+||++|+|++ ||......... ...++ ......+.+...++...+|+.+||..+| .+|+|+
T Consensus 415 vwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa 494 (507)
T PLN03224 415 SYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSV 494 (507)
T ss_pred hhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCH
Confidence 9999999999986 44322111100 01111 0111122345567789999999999876 689999
Q ss_pred HHHHhccCCCC
Q 000993 681 TELLQDALPPQ 691 (1196)
Q Consensus 681 ~eiL~~~~~~~ 691 (1196)
.++|+|+||..
T Consensus 495 ~eaL~Hp~f~~ 505 (507)
T PLN03224 495 GQALSHRFFLP 505 (507)
T ss_pred HHHhCCCCcCC
Confidence 99999999964
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-30 Score=264.52 Aligned_cols=253 Identities=21% Similarity=0.361 Sum_probs=198.2
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~ 457 (1196)
..++|++++++|+|-|++|+.|.+..+++.++||+++.. ....+.||+++|..|+ ||||+++++...+.
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV-----kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp----- 105 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV-----KKKKIKREIKILQNLRGGPNIIKLLDIVKDP----- 105 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH-----HHHHHHHHHHHHHhccCCCCeeehhhhhcCc-----
Confidence 468999999999999999999999999999999998642 2457899999999996 99999999775332
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
.+....+++||+.. +...+. ..++.-.++.++.+++.||.|||
T Consensus 106 ---------------------------------~SktpaLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCH 149 (338)
T KOG0668|consen 106 ---------------------------------ESKTPSLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCH 149 (338)
T ss_pred ---------------------------------cccCchhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHH
Confidence 23445689999975 555544 45778889999999999999999
Q ss_pred hCCCcccCCCcCcEEecCC-CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 537 GQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|+||+|||+||.|++||.. -.++|+|+|+|.++.... .-+.++.+..|--||.+-..+.|+.+
T Consensus 150 S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~----------------eYnVRVASRyfKGPELLVdy~~YDYS 213 (338)
T KOG0668|consen 150 SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK----------------EYNVRVASRYFKGPELLVDYQMYDYS 213 (338)
T ss_pred hcCcccccCCcceeeechhhceeeeeecchHhhcCCCc----------------eeeeeeehhhcCCchheeechhcccc
Confidence 9999999999999999975 569999999998864332 12445778888999999988889999
Q ss_pred chhHHHHHHHHHhhc---CCchh-HHHHHHHHHhhh-------------cCCCCC--------------------ccc-c
Q 000993 616 ADMYSLGIVFFELWH---PFSTA-MERQIVLSDLKQ-------------KGELPP--------------------SWV-A 657 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~-~~~~~~~~~l~~-------------~~~~p~--------------------~~~-~ 657 (1196)
-|||||||+|..|+. ||... ++.....++..- .-.++| .-. -
T Consensus 214 LD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl 293 (338)
T KOG0668|consen 214 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHL 293 (338)
T ss_pred HHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCcccccc
Confidence 999999999999984 77532 222221111100 000111 111 1
Q ss_pred CCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 658 KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 658 ~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
.++++.+|+.++|..|..+|+|+.+++.||||....
T Consensus 294 ~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~ 329 (338)
T KOG0668|consen 294 VSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVR 329 (338)
T ss_pred CChHHHHHHHHHHhhccccccchHHHhcCchHHHHH
Confidence 347899999999999999999999999999987643
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.2e-29 Score=307.40 Aligned_cols=248 Identities=23% Similarity=0.316 Sum_probs=198.3
Q ss_pred CceEEeeeccCCcEEEEEEEEcc-------CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKL-------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~-------~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~ 453 (1196)
++.+.+.||.|.||.|++|.... ....||||.++..... .....+..|+++|+.+ .||||+.++|+|..
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~-- 373 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQ-- 373 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeecc--
Confidence 44556699999999999998541 1457999998754444 6678899999999999 69999999999843
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----------------CC
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HF 516 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l 516 (1196)
...+++|+|||. |+|..+++... .+
T Consensus 374 --------------------------------------~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L 415 (609)
T KOG0200|consen 374 --------------------------------------DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDAL 415 (609)
T ss_pred --------------------------------------CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCc
Confidence 345799999996 79999997654 38
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcc-
Q 000993 517 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV- 595 (1196)
Q Consensus 517 ~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 595 (1196)
+....+.++.||+.||+||++..++||||-.+|||+..+..+||+|||+|+........ ..+...
T Consensus 416 ~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y--------------~~~~~~~ 481 (609)
T KOG0200|consen 416 TTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYY--------------RTKSSAG 481 (609)
T ss_pred CHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCce--------------EecCCCC
Confidence 88899999999999999999999999999999999999999999999999864322211 001112
Q ss_pred -ccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 000993 596 -GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 670 (1196)
Q Consensus 596 -GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL 670 (1196)
-...|||||.+.. ..|+.++|||||||+||||++ |+.+....+.....+ ..+.....+..+++++.++++.||
T Consensus 482 ~LP~kWmApEsl~~-~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l-~~G~r~~~P~~c~~eiY~iM~~CW 559 (609)
T KOG0200|consen 482 TLPVKWMAPESLFD-RVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFL-KEGNRMEQPEHCSDEIYDLMKSCW 559 (609)
T ss_pred ccceeecCHHHhcc-CcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHH-hcCCCCCCCCCCCHHHHHHHHHHh
Confidence 2345999999998 789999999999999999986 887644233334433 355555555667889999999999
Q ss_pred cCCCCCCCCHHHHHhc
Q 000993 671 SPSPSDRPSATELLQD 686 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~ 686 (1196)
+.+|.+||++.++...
T Consensus 560 ~~~p~~RP~F~~~~~~ 575 (609)
T KOG0200|consen 560 NADPEDRPTFSECVEF 575 (609)
T ss_pred CCCcccCCCHHHHHHH
Confidence 9999999999999863
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-29 Score=294.38 Aligned_cols=247 Identities=23% Similarity=0.339 Sum_probs=200.1
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCc----EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGR----HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
+++..++||.|+||+||+|.|...|+ +||||++. ..........+++|+.+|.+++|||+++++++|...
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~-~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s----- 770 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLI-EFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLS----- 770 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEee-ccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc-----
Confidence 34456799999999999999976665 68999876 344455678899999999999999999999988421
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
.+-||++|++ |.|.++++.. +.+-....+.|..||++||.||
T Consensus 771 ------------------------------------~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YL 814 (1177)
T KOG1025|consen 771 ------------------------------------TLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYL 814 (1177)
T ss_pred ------------------------------------hHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHH
Confidence 2468999998 6999999754 5688889999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|.++++||||-.+|||+....++||.|||+|+.+...... .......-.+-|||-|.+.. +.|+.+
T Consensus 815 e~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~e-------------y~~~~gK~pikwmale~i~~-~~~thq 880 (1177)
T KOG1025|consen 815 EEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKE-------------YSAPGGKVPIKWMALESIRI-RKYTHQ 880 (1177)
T ss_pred HhcchhhhhhhhhheeecCCCeEEEEecchhhccCccccc-------------ccccccccCcHHHHHHHhhc-cCCCch
Confidence 9999999999999999999999999999999987543311 11223344677999999887 679999
Q ss_pred chhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 616 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||||||++||++| |+....-.++ ..+.+.+...+.++..+-++..++.+||..|+..||+++++...
T Consensus 881 SDVWsfGVtiWElmTFGa~Py~gi~~~eI--~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~ 953 (1177)
T KOG1025|consen 881 SDVWSFGVTIWELMTFGAKPYDGIPAEEI--PDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEE 953 (1177)
T ss_pred hhhhhhhhhHHHHHhcCCCccCCCCHHHh--hHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHH
Confidence 999999999999997 7766555444 23333555455555666789999999999999999999998753
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=323.01 Aligned_cols=236 Identities=22% Similarity=0.343 Sum_probs=177.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
..|...+.||+|+||.||+|+++.+|..||||++...... ..+|+..+++++|||||+++++|.+
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~l~~l~HpnIv~~~~~~~~--------- 754 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI------PSSEIADMGKLQHPNIVKLIGLCRS--------- 754 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc------cHHHHHHHhhCCCCCcceEEEEEEc---------
Confidence 4566677899999999999999989999999988632221 2346888999999999999999843
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH--- 536 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH--- 536 (1196)
....|+|||||+ |+|.++++. +++..+..++.||+.||+|||
T Consensus 755 -------------------------------~~~~~lv~Ey~~~g~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~~~ 800 (968)
T PLN00113 755 -------------------------------EKGAYLIHEYIEGKNLSEVLRN---LSWERRRKIAIGIAKALRFLHCRC 800 (968)
T ss_pred -------------------------------CCCCEEEEeCCCCCcHHHHHhc---CCHHHHHHHHHHHHHHHHHhccCC
Confidence 234689999997 699999863 889999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
+.+|+||||||+||+++.++..++. ||.+.... ......||+.|||||++.+ ..++.++
T Consensus 801 ~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~-------------------~~~~~~~t~~y~aPE~~~~-~~~~~~s 859 (968)
T PLN00113 801 SPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLC-------------------TDTKCFISSAYVAPETRET-KDITEKS 859 (968)
T ss_pred CCCeecCCCCHHhEEECCCCceEEE-eccccccc-------------------cCCCccccccccCcccccC-CCCCccc
Confidence 6699999999999999999888876 66543221 1123368899999999987 5799999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHH--HH--HHHHhhh--------cCCCCCc---cccCCHHHHHHHHHcccCCCCCCC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMER--QI--VLSDLKQ--------KGELPPS---WVAKFSEQESLLRRLMSPSPSDRP 678 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~--~~--~~~~l~~--------~~~~p~~---~~~~~~~l~~LI~~cL~~dP~~RP 678 (1196)
|||||||++|||++ ||...... .. ....... ....... ......++.+++.+||+.||.+||
T Consensus 860 Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP 939 (968)
T PLN00113 860 DIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARP 939 (968)
T ss_pred chhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCc
Confidence 99999999999997 66422110 00 0000000 0011000 011123567899999999999999
Q ss_pred CHHHHHhc
Q 000993 679 SATELLQD 686 (1196)
Q Consensus 679 ta~eiL~~ 686 (1196)
|+.++++.
T Consensus 940 t~~evl~~ 947 (968)
T PLN00113 940 CANDVLKT 947 (968)
T ss_pred CHHHHHHH
Confidence 99999874
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-28 Score=251.99 Aligned_cols=200 Identities=27% Similarity=0.439 Sum_probs=164.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++..+..||+|++|.|-+.+|..+|+..|+|.++..-. .....+.++|+.+..+. .+|.+|.+||+++.
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn-~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~r-------- 116 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN-SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFR-------- 116 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC-hHHHHHHHHhhhhhccCCCCCeEEEeehhhhc--------
Confidence 556667889999999999999999999999999976544 34566788888876655 79999999998744
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHH----hhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVF----ESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l----~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+||.||.|..||..+. .+...++|...-+++..++.||.||
T Consensus 117 --------------------------------egdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L 164 (282)
T KOG0984|consen 117 --------------------------------EGDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFL 164 (282)
T ss_pred --------------------------------cccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHH
Confidence 3457999999998876654 4567899999999999999999999
Q ss_pred HhC-CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC---CC
Q 000993 536 HGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW---PK 611 (1196)
Q Consensus 536 Hs~-gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~ 611 (1196)
|++ .+||||+||+||||+.+|++|+||||++-.+..+- ..+...|...|||||.+... ..
T Consensus 165 ~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi----------------Akt~daGCkpYmaPEri~~e~n~~g 228 (282)
T KOG0984|consen 165 HSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI----------------AKTMDAGCKPYMAPERINPELNQKG 228 (282)
T ss_pred HHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhh----------------HHHHhcCCCccCChhhcCcccCccc
Confidence 987 79999999999999999999999999998764321 12234688899999987642 35
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHH
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAME 637 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~ 637 (1196)
|+.++||||||++++||.+ ||..+..
T Consensus 229 Y~vksDvWSLGItmiElA~lr~PY~~w~t 257 (282)
T KOG0984|consen 229 YSVKSDVWSLGITMIEMAILRFPYESWGT 257 (282)
T ss_pred ceeehhhhhhhhhhhhhhhccccccccCC
Confidence 8999999999999999985 6655443
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.5e-29 Score=280.61 Aligned_cols=251 Identities=25% Similarity=0.398 Sum_probs=197.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC------CCCeeeeeeeeeecC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ------HQHVVRYYQAWFETG 453 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~------HpnIV~l~~~~~e~~ 453 (1196)
-..|.+....|+|-|++|.+|.+..-|+.||||+|+.... ....=++|+++|+.|+ .-|+++++..|..
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~---M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h-- 505 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV---MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH-- 505 (752)
T ss_pred cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH---HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh--
Confidence 3579999999999999999999999999999999985432 2345678999999994 3477887766632
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC---CCCHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD---HFDKELAWHLFRQIVE 530 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~---~l~e~~~~~i~~qIa~ 530 (1196)
..++|+|+|-+...|.++|.+.+ .+....++.|+.|+..
T Consensus 506 --------------------------------------knHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLfl 547 (752)
T KOG0670|consen 506 --------------------------------------KNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFL 547 (752)
T ss_pred --------------------------------------cceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHH
Confidence 46899999999999999998876 4888899999999999
Q ss_pred HHHHHHhCCCcccCCCcCcEEecCC-CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 531 GLAHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 531 gL~yLHs~gIiHrDLKp~NILld~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
||..|-..||+|.||||+|||+++. ..+||||||.|.....+. -+.+.-+..|.|||++.|
T Consensus 548 ALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~ene-----------------itPYLVSRFYRaPEIiLG- 609 (752)
T KOG0670|consen 548 ALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFASENE-----------------ITPYLVSRFYRAPEIILG- 609 (752)
T ss_pred HHHHHHhcCeeecccCccceEeccCcceeeeccCcccccccccc-----------------ccHHHHHHhccCcceeec-
Confidence 9999999999999999999999876 568999999998765443 233455678999999999
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHH-------------------------------------------
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLS------------------------------------------- 643 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~------------------------------------------- 643 (1196)
-.|+...|+||+||+||||+| -|.+..+.+...-
T Consensus 610 ~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~ 689 (752)
T KOG0670|consen 610 LPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKR 689 (752)
T ss_pred CcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeE
Confidence 569999999999999999986 2433322222110
Q ss_pred --------------HhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 644 --------------DLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 644 --------------~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
.+...+.+|.........+++|+..||..||++|.|..++|+|||+..
T Consensus 690 ~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 690 TVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred EEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence 111111122222222345789999999999999999999999999864
|
|
| >PRK12325 prolyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.9e-27 Score=278.65 Aligned_cols=371 Identities=11% Similarity=0.095 Sum_probs=240.8
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec--CCCcccccceEEEeecCCceEeecC---CC
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSH---EL 809 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRP---D~ 809 (1196)
..+.|+.+|+|....+++.|++.+++.+.++||++|.||.| ++. ++.+.+.++||+|.|.+++.++||| ++
T Consensus 34 ~~~~G~~~~lP~g~~i~~~i~~~i~~~~~~~G~~ev~~P~l~~~~l~~~sg~~~~~~~emf~~~d~~~~~~~L~Pt~e~~ 113 (439)
T PRK12325 34 QQAAGIYSWLPLGLKVLKKIENIVREEQNRAGAIEILMPTIQPADLWRESGRYDAYGKEMLRIKDRHDREMLYGPTNEEM 113 (439)
T ss_pred ccCCceEEECCcHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHHhhcCCccccchhheEEecCCCCEEEEcCCCcHH
Confidence 45899999999999999999999999999999999999999 222 3456788999999999999999999 77
Q ss_pred cHHHHHHHHh-CCCCceeEEEecCeeecC-CCCC---CCcceeEeEEEEeCCCCc---cchHHHHHHHHHHHHHcCCCCc
Q 000993 810 RLPFIRWAIS-NQKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASA---LTEAEVLKVTMDIVTRFFHAES 881 (1196)
Q Consensus 810 T~~iaR~~a~-~~~~P~r~~Y~G~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~---~aDaEvI~la~~~L~~lgi~~~ 881 (1196)
|++++|.... ++.+|+|+||+|++||+| +|+. |.+||+|-++.+|+.+.. .+..+++.+..++++.||+..
T Consensus 114 ~~~~~~~~~~syrdLPlrl~q~~~~fR~E~~~~~GL~R~reF~~~D~h~f~~~~~~a~~~~~~~~~~~~~i~~~lgl~~- 192 (439)
T PRK12325 114 ITDIFRSYVKSYKDLPLNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDLDEEGARHSYNRMFVAYLRTFARLGLKA- 192 (439)
T ss_pred HHHHHHHHhhhchhhchHheEecCEecCCCCCCCCccccceEeEeccEEEeCCHHHHHHHHHHHHHHHHHHHHHcCCce-
Confidence 8888886554 566899999999999998 6664 456799999999987632 456799999999999999974
Q ss_pred eEEEeCcHHHHHHHH-------HHcCCCHHHHHHHH-HHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHH
Q 000993 882 CDIHLNHGDLLEAIW-------SWAGIKAEHREKVA-ELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQT 953 (1196)
Q Consensus 882 ~~i~Lg~~~i~~~~l-------~~lgl~~~~~~~l~-~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~ 953 (1196)
+.+.++...+ .+.. ...|-++. ..+ .+.+... .. . ...|+ . ..+..
T Consensus 193 ~~v~~~~~~~-gg~~s~ef~~~~~~Ge~~~---~~c~~~~~~~~-~~-~----~~~~~---------------~-~~l~~ 246 (439)
T PRK12325 193 IPMRADTGPI-GGDLSHEFIILAETGESTV---FYDKDFLDLLV-PG-E----DIDFD---------------V-ADLQP 246 (439)
T ss_pred EEEEEccCCC-CCCcceeeEeecCCCCceE---EEcCCchhhcc-CC-C----cccCC---------------H-HHHHH
Confidence 6665544311 0000 00010000 000 0000000 00 0 00000 0 11111
Q ss_pred HHHHhcCChhhHHHHHhccCCCChHHHHHHHHHH-HHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcccccccc
Q 000993 954 VGLRFCGAADQALPRLRGALPADKPTRKALDELY-LRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGT 1032 (1196)
Q Consensus 954 l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~-l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~ 1032 (1196)
++. .....+..+ .++. -.+.....++ |+...++.. .|.+|..
T Consensus 247 ~l~-----------~~~~~~~~~-------~~~~~~~~~~~~~~~--~~~~~~~ie--vg~~~~l--------------- 289 (439)
T PRK12325 247 IVD-----------EWTSLYAAT-------EEMHDEAAFAAVPEE--RRLSARGIE--VGHIFYF--------------- 289 (439)
T ss_pred HHh-----------hhcccccch-------hhhhccCCCCcCCCc--ceeecceEE--EEeeecC---------------
Confidence 110 000000000 0000 0000000000 111111111 1222211
Q ss_pred ccccccccchhhhhccccccccccCCCCCCCcceecccHHHHHhhccC------CCCCCCCCCCceEEEEEcC--CCchH
Q 000993 1033 LLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV------DFKPVRNEAGTSVLVCSRG--GGGLL 1104 (1196)
Q Consensus 1033 ~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~------~~~~~~~~~~~~vlv~~~~--~~~~~ 1104 (1196)
|=+| .++||-. +....|....+--.-|++|++|++.+|.+ +...+...+|.+|+|++.. ++...
T Consensus 290 ----g~~y---s~~f~~~-y~d~~g~~~~i~~~~~GiGieRli~~l~e~~~d~~g~~~P~~iaP~qV~Iipi~~~~~~~~ 361 (439)
T PRK12325 290 ----GTKY---SEPMNAK-VQGPDGKEVPVHMGSYGIGVSRLVAAIIEASHDDKGIIWPESVAPFKVGIINLKQGDEACD 361 (439)
T ss_pred ----cccc---cHhcCCE-EECCCCCEEeEEEeeeECCHHHHHHHHHHHhCccCCCcCCCCcCCeEEEEEecCCCCHHHH
Confidence 1223 2334321 11222333333344678899999998863 2233333567899999983 25567
Q ss_pred HHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHH
Q 000993 1105 VERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLL 1182 (1196)
Q Consensus 1105 ~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~ 1182 (1196)
.+|.++++.||+.|++|+++.. +.++++++++|+..|+|++|+||++|+++|+|+||++.++++..++++++++.++
T Consensus 362 ~~a~~i~~~L~~~Gi~v~~D~~-~~~lg~ki~~a~~~giP~~iiVG~~e~~~~~V~vr~r~~~~~~~v~~~el~~~i~ 438 (439)
T PRK12325 362 AACEKLYAALSAAGIDVLYDDT-DERPGAKFATMDLIGLPWQIIVGPKGLAEGKVELKDRKTGEREELSVEAAINRLT 438 (439)
T ss_pred HHHHHHHHHHHHCCCEEEEECC-CCCHhHHHHHHHHcCCCEEEEECCcccccCeEEEEEcCCCceEEEEHHHHHHHHh
Confidence 8999999999999999998877 6799999999999999999999999999999999999999999999999988764
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-28 Score=282.09 Aligned_cols=197 Identities=29% Similarity=0.492 Sum_probs=170.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC------chhHHHHHHHHHHHHhcC---CCCeeeeeeeee
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS------LPVNDRILREVATLSRLQ---HQHVVRYYQAWF 450 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~------~~~~~~~~~Ev~iL~~L~---HpnIV~l~~~~~ 450 (1196)
..+|..++.||.|+||.|++|.++.+...|+||.|.+...- .+..-.+--|+++|..++ |+||+++++.|
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF- 638 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF- 638 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee-
Confidence 46799999999999999999999999999999998754311 011123557999999997 99999999887
Q ss_pred ecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-C-CHHHHHhhcCCCCHHHHHHHHHHH
Q 000993 451 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-R-TLRQVFESYDHFDKELAWHLFRQI 528 (1196)
Q Consensus 451 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-g-sL~~~l~~~~~l~e~~~~~i~~qI 528 (1196)
++..++||+||-.+ | +|.+++.....++|.++..+++||
T Consensus 639 ---------------------------------------Eddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV 679 (772)
T KOG1152|consen 639 ---------------------------------------EDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQV 679 (772)
T ss_pred ---------------------------------------ecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHH
Confidence 34678999999985 5 999999999999999999999999
Q ss_pred HHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 529 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 529 a~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
+.|+++||++||||||||-+|++++.+|-+||+|||.|...... ....++||..|+|||++.|
T Consensus 680 ~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksg-----------------pfd~f~gtv~~aapevl~g 742 (772)
T KOG1152|consen 680 VAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSG-----------------PFDVFVGTVDYAAPEVLGG 742 (772)
T ss_pred HhccccccccCceecccccccEEEecCCeEEEeeccchhhhcCC-----------------CcceeeeeccccchhhhCC
Confidence 99999999999999999999999999999999999999865322 1235789999999999999
Q ss_pred CCCCCCcchhHHHHHHHHHhhc---CCc
Q 000993 609 WPKIDEKADMYSLGIVFFELWH---PFS 633 (1196)
Q Consensus 609 ~~~~s~ksDVwSlGviLyELlt---Pf~ 633 (1196)
.+..+..-|||++||+||.+.. ||+
T Consensus 743 ~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 743 EKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred CccCCCcchhhhhhheeeEEEeccCCCc
Confidence 7777899999999999999985 664
|
|
| >TIGR00409 proS_fam_II prolyl-tRNA synthetase, family II | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-27 Score=286.99 Aligned_cols=439 Identities=12% Similarity=0.097 Sum_probs=270.7
Q ss_pred ccccccccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec--CCCcccccceEEEeecCCceEe
Q 000993 731 HAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLE 804 (1196)
Q Consensus 731 ~~~~l~~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~la 804 (1196)
.+|.+ .+.+.|+.+|+|.+.++++.|++.+++.+.++||++|.||.| ++. +.++...++||+|.|++|+.++
T Consensus 28 rag~i--~~~~~G~~~~lP~g~rv~~~I~~~i~~~~~~~G~~ei~~P~l~~~el~~~sg~~~~~~~emf~~~dr~~~~l~ 105 (568)
T TIGR00409 28 RAGFI--RRLGSGLYNWLPLGLRVLKKVENIVREEMNKDGAIEVLLPALQPAELWQESGRWDTYGPELLRLKDRKGREFV 105 (568)
T ss_pred hCCCc--cccCCceEEECChHHHHHHHHHHHHHHHHHHcCCEEEECCccchHHHHhhcCCCCccchhcEEEecCCCCEEE
Confidence 44555 357899999999999999999999999999999999999999 232 2356678999999999999999
Q ss_pred ecCC----CcHHHHHHHHhCCCCceeEEEecCeeecC-CCCCC---CcceeEeEEEEeCCCCccchHHHHHH---HHHHH
Q 000993 805 LSHE----LRLPFIRWAISNQKSSFKRYEISSVYRRA-IGHSP---PNRYLQGDFDIIGGASALTEAEVLKV---TMDIV 873 (1196)
Q Consensus 805 LRPD----~T~~iaR~~a~~~~~P~r~~Y~G~VfR~e-~~~~~---~~ef~Q~GvEiiG~~~~~aDaEvI~l---a~~~L 873 (1196)
|||+ +|..++|.+.+++..|+|+||+|++||+| +|+.| .+||+|.|++.||.+...+|+|...+ ..++|
T Consensus 106 LrPT~Ee~~t~~~~~~i~syr~LPlrlyqi~~~fR~E~rpr~Gl~R~REF~~~d~~~f~~~~~~a~~e~~~~~~~y~~if 185 (568)
T TIGR00409 106 LGPTHEEVITDLARNEIKSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHSDEESLDATYQKMYQAYSNIF 185 (568)
T ss_pred EcCCCcHHHHHHHHHHHhhccccCeEEEEeeCEeeCCCCCCCCccccccEEEEEEEEEeCChHHHHHHHHHHHHHHHHHH
Confidence 9997 88888888888878899999999999998 88864 45699999999999989999888755 59999
Q ss_pred HHcCCCCceEEEeCcHHHHHHHH------------------HHcCCCHHHHHHHHHHHHHhc-----CCCCCcccccccH
Q 000993 874 TRFFHAESCDIHLNHGDLLEAIW------------------SWAGIKAEHREKVAELLAMMG-----SLRPQSSEWKSKW 930 (1196)
Q Consensus 874 ~~lgi~~~~~i~Lg~~~i~~~~l------------------~~lgl~~~~~~~l~~~l~~~d-----~~~~~~~~~k~~~ 930 (1196)
+.||+. |.+..++++.+.+.. ..++.......+... ....+ .+......+....
T Consensus 186 ~~LgL~--~~~v~~~~g~~gg~~s~ef~~~~~~ge~~i~~c~~~~y~an~e~a~~~-~~~~~~~~~~~~~~~~tp~~~ti 262 (568)
T TIGR00409 186 SRLGLD--FRPVQADSGAIGGSASHEFMVLAESGEDTIVYSDESDYAANIELAEAL-APGERNAPTAELDKVDTPNTKTI 262 (568)
T ss_pred HHhCCc--ceEEEeccccCCCccceEEeEecCCCceEEEEecCcccchhhhhhccc-CccccccccccceeecCCCCCcH
Confidence 999994 888777765443321 111111110000000 00000 0000000000000
Q ss_pred HHHHHHHHHhcCCcHHHHHHHH---------HHH-HHhcCChhhHHHHHhccCCC----ChHHHHHHHHH------HHHH
Q 000993 931 VVIRRQLLQELNLAEAVVNRLQ---------TVG-LRFCGAADQALPRLRGALPA----DKPTRKALDEL------YLRI 990 (1196)
Q Consensus 931 ~~~~~~~~~~~~l~~~~~~~l~---------~l~-~~~~g~~~~~l~~l~~~~~~----~~~~~~~l~~L------~l~~ 990 (1196)
.++....+++....-+-. .++ ..+.|+.+--..+++..+.. .....+.+..+ ++--
T Consensus 263 ----~~~~~~~~~~~~~~~k~~~~~~~~~~~~~v~v~~rgd~~vn~~k~~~~~g~~~~~~~a~~~~~~~~~g~~~g~~gp 338 (568)
T TIGR00409 263 ----AELVECFNLPAEKVVKTLLVKAVDKSEPLVALLVRGDHELNEVKAPNLLLVAQVLELATEEEIFQKIASGPGSLGP 338 (568)
T ss_pred ----HHHHHHhCCCHhHeeeEEEEEecCCccceEEEEecCcchhhHHHHHHHhccCcccccCCHHHHHHhhCCCCCccCc
Confidence 112222222211100000 000 01223322222333322100 00011111111 1111
Q ss_pred cCCC--ceEEEcCCCCCCCCC----------ccceEEE-------E-----EecCCCCcc--------ccccccc-cccc
Q 000993 991 WRIE--KNIYIDALMPPIESY----------HRNLFFQ-------V-----FSVKEKYPA--------TLVEGTL-LAVG 1037 (1196)
Q Consensus 991 ~g~~--~~i~~Dl~lvrgl~Y----------YTG~vFe-------~-----~~~~~~~~~--------~~~~~~~-I~~G 1037 (1196)
.|+. .++..|.+....-++ |++..+. + ...+...|. .+-+.+. .--|
T Consensus 339 v~~~~~~~i~~D~~~~~~~~~~~gan~~~~h~~~~~~~rd~~~~~~~d~~~~~eGd~cp~c~~~l~~~rgIEvGhiF~LG 418 (568)
T TIGR00409 339 VNINGGIPVLIDQTVALMSDFAAGANADDKHYFNVNWDRDVAIPEVADIRKVKEGDPSPDGQGTLKIARGIEVGHIFQLG 418 (568)
T ss_pred cccccCceEEechhhhcccccccccCCCCceeecccccccCCccccchhhhhhccCCCCCCCCcccccceEEEEEeccch
Confidence 1111 234556554333333 2222211 0 011111110 0011111 1235
Q ss_pred cccchhhhhccccccccccCCCCCCCcceecccHHHHHhhcc------CCCCCCCCCCCceEEEEEcCCC--chHHHHHH
Q 000993 1038 GRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYP------VDFKPVRNEAGTSVLVCSRGGG--GLLVERME 1109 (1196)
Q Consensus 1038 GRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~------~~~~~~~~~~~~~vlv~~~~~~--~~~~~a~~ 1109 (1196)
=||-.- ||.. +...-|+.+++...-++||++||+.++. .+...+..-+|.+|.|++.... .....|.+
T Consensus 419 ~kYS~~---~~~~-~~d~~g~~~~~~mgcyGIGvsRli~aiie~~~D~~Gl~wP~~iAP~qV~Iip~~~~~~~~~~~a~~ 494 (568)
T TIGR00409 419 TKYSEA---LKAT-FLDENGKNQFMTMGCYGIGVSRLVSAIAEQHHDERGIIWPKAIAPYDVVIVVMNMKDEEQQQLAEE 494 (568)
T ss_pred hhhHHh---cCCE-EECCCCCEEEEEEeCCcchHHHHHHHHHHHhCccCCCcCChhhCCeEEEEEEcCCChHHHHHHHHH
Confidence 566644 3321 1223344444444456889999988764 2334444568899999987422 45667888
Q ss_pred HHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHH
Q 000993 1110 LVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLD 1183 (1196)
Q Consensus 1110 ~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~ 1183 (1196)
+++.|++.|++|.+++. +.+++++++.|+..|+|+.|+||.+++++|+|+|++++++++..++++++++.|..
T Consensus 495 l~~~L~~~gi~v~~DDr-~~~~G~K~~dadliGiP~~i~vG~~~l~~~~Vei~~R~~~~~~~v~~~~l~~~i~~ 567 (568)
T TIGR00409 495 LYSELLAQGVDVLLDDR-NERAGVKFADSELIGIPLRVVVGKKNLDNGEIEVKKRRNGEKQLIKKDELVECLEE 567 (568)
T ss_pred HHHHHHhCCCEEEEECC-CCCHHHHHHhhhhcCCCEEEEECCCcccCCeEEEEEcCCCceEEEEHHHHHHHHhh
Confidence 99999999999998776 56899999999999999999999999999999999999999999999999887753
|
Prolyl-tRNA synthetase is a class II tRNA synthetase and is recognized by pfam model tRNA-synt_2b, which recognizes tRNA synthetases for Gly, His, Ser, and Pro. The prolyl-tRNA synthetases are divided into two widely divergent groups. This group includes enzymes from Escherichia coli, Bacillus subtilis, Aquifex aeolicus, the spirochete Treponema pallidum, Synechocystis PCC6803, and one of the two prolyL-tRNA synthetases of Saccharomyces cerevisiae. The other group includes the Pro-specific domain of a human multifunctional tRNA ligase and the prolyl-tRNA synthetases from the Archaea, the Mycoplasmas, and the spirochete Borrelia burgdorferi. |
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=262.40 Aligned_cols=136 Identities=22% Similarity=0.367 Sum_probs=117.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-----C---CCeeeeeeeeeec
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-----H---QHVVRYYQAWFET 452 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-----H---pnIV~l~~~~~e~ 452 (1196)
.+|.++++||-|.|++||+|.+..+.+.||+|+.+. .....+..+.|+++|++++ | .+||++++.|...
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS---AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs 154 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS---AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS 154 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh---hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence 689999999999999999999999999999999873 2334567889999999982 3 3699999888654
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc--CCCCHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIVE 530 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~qIa~ 530 (1196)
| ....++++|+|+.+..|..+|... ..++...+..|++||+.
T Consensus 155 G------------------------------------pNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~ 198 (590)
T KOG1290|consen 155 G------------------------------------PNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLT 198 (590)
T ss_pred C------------------------------------CCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHH
Confidence 3 236789999999999999999754 56999999999999999
Q ss_pred HHHHHHhC-CCcccCCCcCcEEecCC
Q 000993 531 GLAHIHGQ-GIIHRDLTPNNIFFDAR 555 (1196)
Q Consensus 531 gL~yLHs~-gIiHrDLKp~NILld~~ 555 (1196)
||.|||.. ||||-||||+|||+...
T Consensus 199 GLdYLH~ecgIIHTDlKPENvLl~~~ 224 (590)
T KOG1290|consen 199 GLDYLHRECGIIHTDLKPENVLLCST 224 (590)
T ss_pred HHHHHHHhcCccccCCCcceeeeecc
Confidence 99999976 99999999999999543
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=238.11 Aligned_cols=212 Identities=38% Similarity=0.710 Sum_probs=180.9
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCCcc
Q 000993 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTL 468 (1196)
Q Consensus 389 LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~ 468 (1196)
||.|++|.||++....+|+.+++|++....... ....+.+|+..++.++|++|+++++++..
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~----------------- 62 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFED----------------- 62 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeec-----------------
Confidence 689999999999998889999999987543321 34678999999999999999999987632
Q ss_pred cccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCC
Q 000993 469 ASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 546 (1196)
Q Consensus 469 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLK 546 (1196)
....+++|||++ ++|.+++... ..++...++.++.+++.+|++||+.|++|+||+
T Consensus 63 -----------------------~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~ 119 (215)
T cd00180 63 -----------------------ENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLK 119 (215)
T ss_pred -----------------------CCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence 256799999998 6999998766 578999999999999999999999999999999
Q ss_pred cCcEEecC-CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHH
Q 000993 547 PNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVF 625 (1196)
Q Consensus 547 p~NILld~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviL 625 (1196)
|.||+++. ++.++|+|||.+........ ......+...|++||.+.....++.++|+|++|+++
T Consensus 120 ~~ni~~~~~~~~~~l~d~~~~~~~~~~~~---------------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~ 184 (215)
T cd00180 120 PENILLDSDNGKVKLADFGLSKLLTSDKS---------------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVIL 184 (215)
T ss_pred HhhEEEeCCCCcEEEecCCceEEccCCcc---------------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHH
Confidence 99999999 89999999999976432210 122346788999999988733688999999999999
Q ss_pred HHhhcCCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 626 FELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 626 yELltPf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
++| ..+.+++.+|++.||.+||++.++++++
T Consensus 185 ~~l-------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 185 YEL-------------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHH-------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 999 4788899999999999999999999763
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >PRK04173 glycyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.7e-26 Score=271.07 Aligned_cols=323 Identities=15% Similarity=0.127 Sum_probs=225.5
Q ss_pred CCcccccchhhhHhhHHHHHHHHHHHHH--cCCccccccce------eecCCCcccccceEEEe--------e-------
Q 000993 741 NTSSIQYSDLDTELRDYVVQVTKEMFRQ--HCAKHLEIEPM------YLLGDCPQFKRNTVKLL--------T------- 797 (1196)
Q Consensus 741 ~~G~~D~~p~ea~~~~~I~~~i~~~f~~--~Gy~~I~tP~~------~~~~~~~~~~~~my~f~--------D------- 797 (1196)
..|+.||+|..+.+++.|++.|++.|.. +||.+|.||++ ..++|.+.+.+.||... |
T Consensus 27 ~~g~~d~~P~G~~l~~~i~~~~r~~~~~~~~~~~ev~tp~i~~~~l~~~SGH~~~f~d~m~~~~~~~~~~r~d~~~~~~~ 106 (456)
T PRK04173 27 LAGFWDYGPLGVELKNNIKRAWWKSFVQEREDVVGIDSPIIMPPEVWEASGHVDNFSDPLVECKKCKKRYRADHLIEELG 106 (456)
T ss_pred hhcccccChhhHHHHHHHHHHHHHHHHhccCCEEEEeccccCCHHHHhhcCCccccCCceeEeCCCCCEeechhhhHHHh
Confidence 5799999999999999999999999987 89999999999 33455666667777653 1
Q ss_pred ------------------------------------------------cCCceEeecCCCcH----HHHHHHHhCC-CCc
Q 000993 798 ------------------------------------------------HGGDLLELSHELRL----PFIRWAISNQ-KSS 824 (1196)
Q Consensus 798 ------------------------------------------------~~G~~laLRPD~T~----~iaR~~a~~~-~~P 824 (1196)
.++..+.||||..- .+.+.+-+++ .+|
T Consensus 107 ~~~~~~~~~~~~~~~~~~~m~cp~~~~~~~~~~~~f~l~f~~~~g~~~~~~~~~~lRpetaqg~~~~f~~~~~syr~dLP 186 (456)
T PRK04173 107 IDAEGLSNEELKELIRENDIKCPECGGENWTEVRQFNLMFKTFIGPVEDSKSLGYLRPETAQGIFVNFKNVLRTARKKLP 186 (456)
T ss_pred hhhccccHHHHHHHHHHhCCCCCCCCCCCCcCccchhhceeecccCccCCCcceeeccccchhHHHHHHHHHHhccccCC
Confidence 11234567886553 2445555566 789
Q ss_pred eeEEEecCeeecCCCCC----CCcceeEeEEEEeCCCCccch--HHHHHHHHHHHHHcCCCCceEEEeCcHHHHHHHHHH
Q 000993 825 FKRYEISSVYRRAIGHS----PPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSW 898 (1196)
Q Consensus 825 ~r~~Y~G~VfR~e~~~~----~~~ef~Q~GvEiiG~~~~~aD--aEvI~la~~~L~~lgi~~~~~i~Lg~~~i~~~~l~~ 898 (1196)
+|++++|+|||+|.... |.|||+|.++++|+.++...+ ..+|.++.++|..+|+..
T Consensus 187 lr~aq~g~~~RnE~s~~~gL~RvReF~q~e~hiF~~peq~~~e~~~~l~~~~~~l~~lG~~~------------------ 248 (456)
T PRK04173 187 FGIAQIGKSFRNEITPRNFIFRTREFEQMELEFFVKPGTDNEWFAYWIELRKNWLLDLGIDP------------------ 248 (456)
T ss_pred eeeeEEchhHhCccCCCCCceeeceeeeeEEEEEECcChHHHHHHHHHHHHHHHHHHcCCCc------------------
Confidence 99999999999986432 456799999999998875422 133333333333333331
Q ss_pred cCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChH
Q 000993 899 AGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKP 978 (1196)
Q Consensus 899 lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~ 978 (1196)
T Consensus 249 -------------------------------------------------------------------------------- 248 (456)
T PRK04173 249 -------------------------------------------------------------------------------- 248 (456)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCC-CCccccccccccccccccchhhh--hccccccccc
Q 000993 979 TRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKE-KYPATLVEGTLLAVGGRYDYLLH--RMWDREYVGY 1055 (1196)
Q Consensus 979 ~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~-~~~~~~~~~~~I~~GGRYD~L~~--~fg~~~~~~~ 1055 (1196)
.++.++....++++||++.+|++.+... +. ......++++||+|| |.. .|++.. +.+
T Consensus 249 ----------------~~~~~s~~~~~e~~~ys~~~wd~e~~~~~g~--~~~e~~g~~~~~dyd-L~~~~~~s~~d-l~y 308 (456)
T PRK04173 249 ----------------ENLRFREHLPEELAHYSKATWDIEYKFPFGR--FWGELEGIANRTDYD-LSRHSKHSGED-LSY 308 (456)
T ss_pred ----------------cceEEEecCcchhhccHHHHHhHHHhCCCCC--cEEEEeeeeccchhh-cccchhhcCCC-eEE
Confidence 2355555555556666666655533210 00 001112578899999 653 343322 121
Q ss_pred c----CCCCCCC-cceecccHHHH-HhhccCCC--------------CCCCCCCCceEEEEEcCCC-chHHHHHHHHHHH
Q 000993 1056 A----SRTNPPS-GVGASLALETI-IQHYPVDF--------------KPVRNEAGTSVLVCSRGGG-GLLVERMELVAEL 1114 (1196)
Q Consensus 1056 ~----g~~~~~p-AvGfaiglerl-~~~L~~~~--------------~~~~~~~~~~vlv~~~~~~-~~~~~a~~~a~~L 1114 (1196)
. ++....| .+|+|+|+||| +.+|.++. ..+...+|.+|+|++.++. ....+|.+++++|
T Consensus 309 ~~~~~~~~~~~P~vi~~siGieRl~~ail~~~~~~~~~~~~~~r~~l~~P~~lAP~qV~Iipi~~~~e~~~~A~~la~~L 388 (456)
T PRK04173 309 FDDETTGEKYIPYVIEPSAGLDRLLLAFLEDAYTEEELGGGDKRTVLRLPPALAPVKVAVLPLVKKEKLSEKAREIYAEL 388 (456)
T ss_pred EecCCCCceeeeEEEEecccHHHHHHHHHHHHcccccccCCcceeEEECCCcCCCCEEEEEEecCcHHHHHHHHHHHHHH
Confidence 1 1112234 45999999996 44444221 1222357889999998621 3678999999999
Q ss_pred HHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHH
Q 000993 1115 WEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDA 1184 (1196)
Q Consensus 1115 r~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~ 1184 (1196)
|++ ++|+++. .+++++++++|++.|+|++|+||++|+++|+|+||++.+++|..++++++++.+++.
T Consensus 389 R~~-irVelD~--~~slgkkir~A~~~Gip~~IIIG~~El~~g~VtvR~r~t~eq~~v~l~el~~~l~~~ 455 (456)
T PRK04173 389 RKD-FNVDYDD--SGSIGKRYRRQDEIGTPFCITVDFDTLEDNTVTIRDRDTMEQVRVKIDELKDYLAEK 455 (456)
T ss_pred Hhc-CEEEEeC--CCCHHHHHHHHHHcCCCEEEEECCchhhCCEEEEEECCCCceEEEeHHHHHHHHHhh
Confidence 999 9999874 358999999999999999999999999999999999999999999999998888653
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=259.43 Aligned_cols=267 Identities=24% Similarity=0.391 Sum_probs=196.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc---CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCcc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKL---DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~---~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~ 455 (1196)
.+.|..+.+||.|.|++||++.+.. .++.||+|.+..... -.++.+|++.|..+ .|.||+++.+|+-
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~----p~ri~~El~~L~~~gG~~ni~~~~~~~r----- 105 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS----PSRILNELEMLYRLGGSDNIIKLNGCFR----- 105 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC----chHHHHHHHHHHHhccchhhhcchhhhc-----
Confidence 4678899999999999999999987 688999999875433 34688999999999 6999999998872
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+.+||||++. ...+++.. ++-.+++.+++.++.||++
T Consensus 106 -----------------------------------nnd~v~ivlp~~~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~ 147 (418)
T KOG1167|consen 106 -----------------------------------NNDQVAIVLPYFEHDRFRDLYRS---LSLAEIRWYLRNLLKALAH 147 (418)
T ss_pred -----------------------------------cCCeeEEEecccCccCHHHHHhc---CCHHHHHHHHHHHHHHhhh
Confidence 35678999999985 66666654 6688999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCC-CCeEEeccCcchhcccccccc---C----CCCC--------------CCCCCcc----
Q 000993 535 IHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQ---D----AAFP--------------TDTGGVS---- 588 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~-~~vKL~DFGlA~~~~~~~~~~---~----~~~~--------------~~~~~~~---- 588 (1196)
+|.+|||||||||+|+|.+.. +.-.|.|||+|.......... . ...+ ....+..
T Consensus 148 ~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~ 227 (418)
T KOG1167|consen 148 LHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCN 227 (418)
T ss_pred hhccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccC
Confidence 999999999999999999865 678899999998432211000 0 0000 0000111
Q ss_pred ----ccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHH-HHH------------HHHhhhc
Q 000993 589 ----VDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMER-QIV------------LSDLKQK 648 (1196)
Q Consensus 589 ----~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~-~~~------------~~~l~~~ 648 (1196)
...-...||++|.|||++..++..+.++||||.|||+.-+++ ||....+. ... .+.....
T Consensus 228 ~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~ 307 (418)
T KOG1167|consen 228 DGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALP 307 (418)
T ss_pred CCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcC
Confidence 112346899999999999998889999999999999999985 77533211 000 0000000
Q ss_pred CC-----------------------------------CCCccccCC-HHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 649 GE-----------------------------------LPPSWVAKF-SEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 649 ~~-----------------------------------~p~~~~~~~-~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
+. .+..+.... ..+.+|+.+||..||.+|.|++++|+|+||...
T Consensus 308 g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~ 387 (418)
T KOG1167|consen 308 GRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA 387 (418)
T ss_pred CceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence 00 001112222 257899999999999999999999999999854
Q ss_pred h
Q 000993 693 E 693 (1196)
Q Consensus 693 ~ 693 (1196)
.
T Consensus 388 ~ 388 (418)
T KOG1167|consen 388 D 388 (418)
T ss_pred h
Confidence 3
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-26 Score=298.64 Aligned_cols=198 Identities=25% Similarity=0.401 Sum_probs=141.2
Q ss_pred cEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccc
Q 000993 493 TYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL 571 (1196)
Q Consensus 493 ~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~ 571 (1196)
..++.+|||++++|.+++.. ...+++.+++.++.||++||+|||++||+||||||+||||+..+.+|++|||++.....
T Consensus 53 ~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~ 132 (793)
T PLN00181 53 DSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 132 (793)
T ss_pred chhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccc
Confidence 45788899999999999975 34699999999999999999999999999999999999997655555555555433211
Q ss_pred cccc--cCCCCC-----------------C-CCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhcC
Q 000993 572 EQLD--QDAAFP-----------------T-DTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHP 631 (1196)
Q Consensus 572 ~~~~--~~~~~~-----------------~-~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELltP 631 (1196)
.... ....+. . ............+||+.|||||++.+ ..|+.++|||||||+||||++|
T Consensus 133 ~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDVwSlGviL~ELl~~ 211 (793)
T PLN00181 133 DEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNG-SSSNCASDVYRLGVLLFELFCP 211 (793)
T ss_pred cccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhcc-CCCCchhhhhhHHHHHHHHhhC
Confidence 0000 000000 0 00000111233578999999999987 5689999999999999999987
Q ss_pred CchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 632 FSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 632 f~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
+.+..........+.. ...|+......+...+++.+||++||.+||++.++++|+|+...
T Consensus 212 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~ 271 (793)
T PLN00181 212 VSSREEKSRTMSSLRH-RVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP 271 (793)
T ss_pred CCchhhHHHHHHHHHH-hhcChhhhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence 6654433322222221 22333333345677899999999999999999999999999764
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.4e-26 Score=250.72 Aligned_cols=249 Identities=17% Similarity=0.216 Sum_probs=196.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.++.....+-+|.||.||.|.|+.. .+.|-+|.++ ...+.-....++.|...+..+.|||+.++.+++++.
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk-~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~--- 359 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVK-QHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIED--- 359 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHH-hcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeec---
Confidence 4566777889999999999988743 2346677664 234444567889999999999999999999998653
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--------CCCCHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--------DHFDKELAWHLFR 526 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--------~~l~e~~~~~i~~ 526 (1196)
....++++.+++ |+|..++... ..++..+...++.
T Consensus 360 ------------------------------------~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~mas 403 (563)
T KOG1024|consen 360 ------------------------------------YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMAS 403 (563)
T ss_pred ------------------------------------cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHH
Confidence 233467778887 7999998732 2377788889999
Q ss_pred HHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhc
Q 000993 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 606 (1196)
Q Consensus 527 qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 606 (1196)
|++.||+|||++||||.||..+|++|++...+||+|=.+++.+-..++. +-+.+......||+||.+
T Consensus 404 Qla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYh-------------cLGDnEnRPvkWMslEal 470 (563)
T KOG1024|consen 404 QLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYH-------------CLGDNENRPVKWMSLEAL 470 (563)
T ss_pred HHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchhccccCccccc-------------ccCCCCCCcccccCHHHH
Confidence 9999999999999999999999999999999999999999876433211 112223346689999999
Q ss_pred cCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHH
Q 000993 607 QGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 682 (1196)
Q Consensus 607 ~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~e 682 (1196)
+. ..|+.++|+|||||+||||+| |+..-++.+..... ..+.....+.+++.++..++..||..+|++||+++|
T Consensus 471 ~n-~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~yl--kdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Q 547 (563)
T KOG1024|consen 471 QN-SHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYL--KDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQ 547 (563)
T ss_pred hh-hhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHH--hccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHH
Confidence 98 689999999999999999996 88877665543322 244444455577789999999999999999999999
Q ss_pred HHh
Q 000993 683 LLQ 685 (1196)
Q Consensus 683 iL~ 685 (1196)
+..
T Consensus 548 lv~ 550 (563)
T KOG1024|consen 548 LVI 550 (563)
T ss_pred HHH
Confidence 875
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-25 Score=237.09 Aligned_cols=245 Identities=22% Similarity=0.349 Sum_probs=187.3
Q ss_pred CCCCCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeee
Q 000993 372 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWF 450 (1196)
Q Consensus 372 ~~~~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~ 450 (1196)
..++.-.+.+.|.+.+.||+|.||.+.+|+|+.+++.+|+|.+.... ....+|.+|...--.| .|.||+.-|++-+
T Consensus 15 ~el~kv~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~---tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaF 91 (378)
T KOG1345|consen 15 EELKKVDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ---TTQADFVREFHYSFFLSPHQHIIDTYEVAF 91 (378)
T ss_pred ccccccchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch---hhHHHHHHHhccceeeccchhhhHHHHHHh
Confidence 34455566789999999999999999999999999999999887433 3467899998655555 5899998775543
Q ss_pred ecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHH
Q 000993 451 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIV 529 (1196)
Q Consensus 451 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa 529 (1196)
+ ...+++++||||+ |+|..-+.. ..+-+....+++.|++
T Consensus 92 q---------------------------------------t~d~YvF~qE~aP~gdL~snv~~-~GigE~~~K~v~~ql~ 131 (378)
T KOG1345|consen 92 Q---------------------------------------TSDAYVFVQEFAPRGDLRSNVEA-AGIGEANTKKVFAQLL 131 (378)
T ss_pred h---------------------------------------cCceEEEeeccCccchhhhhcCc-ccccHHHHHHHHHHHH
Confidence 3 2457889999998 788877655 4588888999999999
Q ss_pred HHHHHHHhCCCcccCCCcCcEEecC--CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 530 EGLAHIHGQGIIHRDLTPNNIFFDA--RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 530 ~gL~yLHs~gIiHrDLKp~NILld~--~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
+|+.|+|+.++||||||.+||||-. ...+||||||+++..... -.....+..|.+||...
T Consensus 132 SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t------------------V~~~~~~~~y~~pe~~~ 193 (378)
T KOG1345|consen 132 SAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT------------------VKYLEYVNNYHAPELCD 193 (378)
T ss_pred HHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCce------------------ehhhhhhcccCCcHHHh
Confidence 9999999999999999999999943 347999999998753210 11123466799999765
Q ss_pred CC----CCCCCcchhHHHHHHHHHhhc---CCchhHHH-----HHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCC
Q 000993 608 GW----PKIDEKADMYSLGIVFFELWH---PFSTAMER-----QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 675 (1196)
Q Consensus 608 ~~----~~~s~ksDVwSlGviLyELlt---Pf~~~~~~-----~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~ 675 (1196)
.. -..++.+|+|.|||++|.++| ||....-+ +-.....+.....|..+...++.+..+.++-|.++|+
T Consensus 194 ~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~ 273 (378)
T KOG1345|consen 194 TVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFK 273 (378)
T ss_pred hccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCccc
Confidence 32 225788999999999999997 66533211 1111112223456677777888999999999999999
Q ss_pred CC
Q 000993 676 DR 677 (1196)
Q Consensus 676 ~R 677 (1196)
+|
T Consensus 274 dr 275 (378)
T KOG1345|consen 274 DR 275 (378)
T ss_pred cc
Confidence 99
|
|
| >TIGR00408 proS_fam_I prolyl-tRNA synthetase, family I | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-24 Score=258.75 Aligned_cols=323 Identities=10% Similarity=0.094 Sum_probs=224.0
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecC---CCcccccceEEEeecC----CceEeecC
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG---DCPQFKRNTVKLLTHG----GDLLELSH 807 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~---~~~~~~~~my~f~D~~----G~~laLRP 807 (1196)
..++|+++|+|.+..+++.|++.+++.++++||++|.||.| ++.. +.+.+.++||.+.|.+ ++.++|||
T Consensus 25 ~~~~G~~~~lP~g~~i~~~I~~~i~~~~~~~G~~ev~~P~l~~~~~~~~~~~h~~~f~~e~f~v~~~g~~~~~e~l~LrP 104 (472)
T TIGR00408 25 YPVKGCYVWLPYGFKIWKNIQKILRNILDEIGHEEVYFPMLIPESELAKEKDHIKGFEPEVYWITHGGLSKLDEPLALRP 104 (472)
T ss_pred cCCCceEEECcCHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHHhhcchhhhcchhcEEEecCCCCccCCcEEEeC
Confidence 35799999999999999999999999999999999999999 3332 2444588999999987 48999999
Q ss_pred CCcHHHHHHHHh----CCCCceeEEEecCeeecCCCC----CCCcceeEeEEEE-eCCCCccchH---HHHHHHHHHHH-
Q 000993 808 ELRLPFIRWAIS----NQKSSFKRYEISSVYRRAIGH----SPPNRYLQGDFDI-IGGASALTEA---EVLKVTMDIVT- 874 (1196)
Q Consensus 808 D~T~~iaR~~a~----~~~~P~r~~Y~G~VfR~e~~~----~~~~ef~Q~GvEi-iG~~~~~aDa---EvI~la~~~L~- 874 (1196)
+.|++++.+++. ++..|+|+|++|+|||+|.++ .|.+||+|.+++. +... ..++. +++.+..+++.
T Consensus 105 t~e~~i~~~~~~~i~S~rdLPlr~~q~~~vfR~E~~~~~gl~R~rEF~~~e~h~~~~~~-e~a~~e~~~~l~~y~~i~~~ 183 (472)
T TIGR00408 105 TSETAMYPMFKKWVKSYTDLPLKINQWVNVFRYETKHTRPFLRTREFTWQEAHTAHATA-EEAEEQVLRALDIYKEFIEN 183 (472)
T ss_pred CCcHHHHHHHhccccChhhcCHHHhheeeeecCCCCCCCCcceeeeeehhhhhhhhCCH-HHHHHHHHHHHHHHHHHHHh
Confidence 999999966554 446799999999999998764 4556799999994 5443 33333 55666677776
Q ss_pred HcCCCCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHH
Q 000993 875 RFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTV 954 (1196)
Q Consensus 875 ~lgi~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l 954 (1196)
.||+. +.+... ++ .++
T Consensus 184 ~lglp--~~~~~~--------------~~------------~ek------------------------------------ 199 (472)
T TIGR00408 184 SLAIP--YFVGRK--------------PE------------WEK------------------------------------ 199 (472)
T ss_pred ccCCe--EEEEec--------------Cc------------hhh------------------------------------
Confidence 67774 333110 00 000
Q ss_pred HHHhcCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcccccccccc
Q 000993 955 GLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLL 1034 (1196)
Q Consensus 955 ~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I 1034 (1196)
+.|. .....++..+.-|-..-.|++|..
T Consensus 200 ---~~ga--------------------------------~~~~~~e~~~~dgr~~q~~t~~~L----------------- 227 (472)
T TIGR00408 200 ---FAGA--------------------------------EYTWAFETIMPDGRTLQIATSHNL----------------- 227 (472)
T ss_pred ---cCCc--------------------------------cceEEEeEEEcCCCEEEEeeeecc-----------------
Confidence 0000 000111111110111112222211
Q ss_pred ccccccchhhhhccccccccccC-CCCCCCcceecccH-HHHHhhcc------CCCCCCCCCCCceEEEEEc--CC---C
Q 000993 1035 AVGGRYDYLLHRMWDREYVGYAS-RTNPPSGVGASLAL-ETIIQHYP------VDFKPVRNEAGTSVLVCSR--GG---G 1101 (1196)
Q Consensus 1035 ~~GGRYD~L~~~fg~~~~~~~~g-~~~~~pAvGfaigl-erl~~~L~------~~~~~~~~~~~~~vlv~~~--~~---~ 1101 (1196)
|- ++.++|+-. +.+ .++.....-+++|+ +|++.+|. .+...+...+|.+|+|+++ +. +
T Consensus 228 --g~---~~sk~f~i~----y~~~~g~~~~~h~~s~Gi~eRli~~lie~~~d~~gl~~P~~iaP~qV~Iipi~~~~~~~~ 298 (472)
T TIGR00408 228 --GQ---NFAKTFEIK----FETPTGDKEYAYQTSYGISTRVIGALIAIHSDEKGLVLPPRVAPIQVVIIPIIFKKKENE 298 (472)
T ss_pred --cc---cccHhcCCE----EECCCCCEEeeEEccccHHHHHHHHHHHHhCCCCceeeChhhCcceEEEEEccCCCCCCH
Confidence 00 112222211 111 11122333477777 99988873 2222233457789999996 31 2
Q ss_pred chHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHH
Q 000993 1102 GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFL 1181 (1196)
Q Consensus 1102 ~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l 1181 (1196)
....+|.++++.||+.|++|+++.. +.++++++++|+++|+|++|+||++|+++|+|+||++++++|..++++++++.+
T Consensus 299 ~~~~~A~~l~~~Lr~~girv~lD~r-~~s~gkk~k~Ae~~GvP~~IiIG~~Ele~~~V~ik~rdt~eq~~v~l~el~~~l 377 (472)
T TIGR00408 299 KVMEAAREVRSRLKKAGFRVHIDDR-DNRPGRKFYQWEIKGIPLRIEVGPNDIEKNIAVISRRDTGEKYQVSLDQLEERV 377 (472)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECC-CCCHHHHHHHHHHCCCCEEEEECcchhhCCeEEEEECCCCceEEEEHHHHHHHH
Confidence 4678899999999999999998876 459999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHhh
Q 000993 1182 LDAIASQ 1188 (1196)
Q Consensus 1182 ~~~l~~~ 1188 (1196)
.+.++..
T Consensus 378 ~~~l~~~ 384 (472)
T TIGR00408 378 VELLNNI 384 (472)
T ss_pred HHHHHHH
Confidence 7776644
|
Prolyl-tRNA synthetase is a class II tRNA synthetase and is recognized by pfam model tRNA-synt_2b, which recognizes tRNA synthetases for Gly, His, Ser, and Pro. The prolyl-tRNA synthetases are divided into two widely divergent families. This family includes the archaeal enzyme, the Pro-specific domain of a human multifunctional tRNA ligase, and the enzyme from the spirochete Borrelia burgdorferi. The other family includes enzymes from Escherichia coli, Bacillus subtilis, Synechocystis PCC6803, and one of the two prolyL-tRNA synthetases of Saccharomyces cerevisiae. |
| >PLN02837 threonine-tRNA ligase | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.6e-24 Score=261.62 Aligned_cols=353 Identities=15% Similarity=0.138 Sum_probs=248.3
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce------eecCCCcccccceEEEeecCCceEeecCCCcHHH
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPF 813 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~i 813 (1196)
...|+..|+|..+.+++.+++.+++...++||++|.||.+ ..+++++.+.++||++.|..++.++||| +++|.
T Consensus 235 ~g~G~~~~~p~G~~l~~~L~~~~~~~~~~~G~~~v~tP~l~~~~l~~~sGh~~~~~~~mf~~~~~~~~~y~l~p-~~~p~ 313 (614)
T PLN02837 235 AGGGLVFWHPKGAIVRHIIEDSWKKMHFEHGYDLLYTPHVAKADLWKTSGHLDFYKENMYDQMDIEDELYQLRP-MNCPY 313 (614)
T ss_pred cCCcceEEechHHHHHHHHHHHHHHHHHHCCCEEEECCccCCHHHHhhcCCcccchhhcccccCCCCceEEECC-CCcHH
Confidence 4679999999999999999999999999999999999999 3345577889999999998889999999 66665
Q ss_pred -HHHHHh----CCCCceeEEEecCeeecCCCC-----CCCcceeEeEEEEeCCCCccch--HHHHHHHHHHHHHcCCCCc
Q 000993 814 -IRWAIS----NQKSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAES 881 (1196)
Q Consensus 814 -aR~~a~----~~~~P~r~~Y~G~VfR~e~~~-----~~~~ef~Q~GvEiiG~~~~~aD--aEvI~la~~~L~~lgi~~~ 881 (1196)
+-++.. ++..|+|++.+|+|||+|..+ -|.++|+|.++++|+.++...+ .+++.+..++++.||+..
T Consensus 314 ~~~~~~~~~~SyrdLPlr~~~~~~~~R~E~~g~~~GL~RvreF~~~e~h~f~~~~q~~~e~~~~l~~~~~~~~~lg~~~- 392 (614)
T PLN02837 314 HILVYKRKLHSYRDLPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLTEEILKQFGFSK- 392 (614)
T ss_pred HHHHHhCccCChhHCCHhhEeecccccCCCCCCCcCcccccceEECeEEEEeCHHHHHHHHHHHHHHHHHHHHHcCCCe-
Confidence 445443 224699999999999998742 2556799999999998866333 378999999999999974
Q ss_pred eEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCC
Q 000993 882 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 961 (1196)
Q Consensus 882 ~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~ 961 (1196)
+.+.++.+. -+.+|-++.|...-..+-.. +...++.-...+.-.+|
T Consensus 393 ~~~~~~t~~-----~~~~g~~~~w~~~~~~l~~~----------------------l~~~~~~~~~~~g~~af------- 438 (614)
T PLN02837 393 YEINLSTRP-----EKSVGSDDIWEKATTALRDA----------------------LDDKGWEYKVDEGGGAF------- 438 (614)
T ss_pred EEEEecCCc-----hhccCCHHHHHHHHHHHHHH----------------------HHHcCCCceeCCCcccc-------
Confidence 888888753 13456555443322221111 11112111100001111
Q ss_pred hhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccc
Q 000993 962 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD 1041 (1196)
Q Consensus 962 ~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD 1041 (1196)
+| .++.+-+...-|..+-.|++--.+. -+-|||
T Consensus 439 -----------------------------yg--pkid~~~~d~~gr~~q~~tiqldf~----------------~~~~f~ 471 (614)
T PLN02837 439 -----------------------------YG--PKIDLKIEDALGRKWQCSTIQVDFN----------------LPERFD 471 (614)
T ss_pred -----------------------------cC--cceeeEeeccCCceeeecceeEeec----------------chhhcC
Confidence 11 1222222222244444444421111 122333
Q ss_pred hhhhhccccccccccCCCCCCC-cceecc--cHHHHHhhccC---CCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHH
Q 000993 1042 YLLHRMWDREYVGYASRTNPPS-GVGASL--ALETIIQHYPV---DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELW 1115 (1196)
Q Consensus 1042 ~L~~~fg~~~~~~~~g~~~~~p-AvGfai--glerl~~~L~~---~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr 1115 (1196)
-- | ...-|... .| -+.-++ ++||++.+|.+ +..+. ..+|.+|+|++.+ +....+|.+++++||
T Consensus 472 l~---y-----~~~d~~~~-~pv~ih~~~~G~~eRlia~Lie~~~g~~P~-~laP~qV~IIpi~-~~~~~~A~~Ia~~Lr 540 (614)
T PLN02837 472 IT---Y-----VDSNSEKK-RPIMIHRAILGSLERFFGVLIEHYAGDFPL-WLAPVQARVLPVT-DNELEYCKEVVAKLK 540 (614)
T ss_pred cE---E-----ECCCCCcc-CCEEEEcCCccCHHHHHHHHHHHcCCCCCC-CCCCccEEEEEeC-hHHHHHHHHHHHHHH
Confidence 11 1 11222221 12 222222 59999988763 33333 3478899999986 667899999999999
Q ss_pred HcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHhh
Q 000993 1116 EENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1188 (1196)
Q Consensus 1116 ~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~~ 1188 (1196)
+.|++|++ .. ++++++++++|++.|+|++|+||++|+++|+|+||++.++++..++++++++.|++.+++.
T Consensus 541 ~~GirVev-~~-~~slgkkir~A~~~gip~~IiIG~~E~e~~~VtVr~r~~geq~~v~~~el~~~l~~~~~~~ 611 (614)
T PLN02837 541 AKGIRAEV-CH-GERLPKLIRNAETQKIPLMAVVGPKEVETRTLTVRSRHGGELGTMPVDDFINRIQLAVENR 611 (614)
T ss_pred HCCCEEEE-eC-CCCHHHHHHHHHHcCCCEEEEEcchhhhcCEEEEEECCCCceeEeeHHHHHHHHHHHHhhc
Confidence 99999998 44 5799999999999999999999999999999999999999999999999999999888754
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.7e-24 Score=229.06 Aligned_cols=209 Identities=33% Similarity=0.569 Sum_probs=171.1
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCc
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 462 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~ 462 (1196)
|.+.+.||.|++|.||+|.+..+++.+|+|.+...... .....+.+|+..++.++|+|++++++.+..
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~----------- 68 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFED----------- 68 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeec-----------
Confidence 56788999999999999999988999999998754332 245688899999999999999999987632
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 463 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 463 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~-l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
....++++||+++ +|.+++..... +++..++.++.+++.++.|||++++
T Consensus 69 -----------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i 119 (225)
T smart00221 69 -----------------------------PEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGI 119 (225)
T ss_pred -----------------------------CCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 2467899999986 99999987766 8999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+|+||+|.||+++.++.++|+|||++........ .......++..|++||.+.+...++.++|+||
T Consensus 120 ~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~--------------~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~ 185 (225)
T smart00221 120 VHRDLKPENILLGMDGLVKLADFGLARFIHRDLA--------------ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWS 185 (225)
T ss_pred ecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc--------------ccccceeccCCcCCHhHhcCCCCCCchhhHHH
Confidence 9999999999999999999999999986532210 01233567889999999843356788999999
Q ss_pred HHHHHHHhhc---CCch-hHHHHHHHHHhh
Q 000993 621 LGIVFFELWH---PFST-AMERQIVLSDLK 646 (1196)
Q Consensus 621 lGviLyELlt---Pf~~-~~~~~~~~~~l~ 646 (1196)
||+++|+|++ ||.. ..+.....+.+.
T Consensus 186 lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~ 215 (225)
T smart00221 186 LGVILYELLWGPEPFSGEGEFTSLLSDVWS 215 (225)
T ss_pred HHHHHHHHHHCCCCccccchhHHHHHHHHh
Confidence 9999999996 8866 344444444444
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >PRK08661 prolyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.5e-23 Score=249.39 Aligned_cols=324 Identities=12% Similarity=0.104 Sum_probs=224.0
Q ss_pred CCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec---CCCcccccceEEEeecC----CceEeecCCC
Q 000993 741 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL---GDCPQFKRNTVKLLTHG----GDLLELSHEL 809 (1196)
Q Consensus 741 ~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~---~~~~~~~~~my~f~D~~----G~~laLRPD~ 809 (1196)
++|+.+|+|..+.+++.|++.+++.|+++||++|.||.| ++. ++.+.+.++||.+.+.+ ++.++|||+.
T Consensus 33 v~G~~~~~P~g~~i~~~i~~~~~~~~~~~G~~ev~~P~l~~~~~~~~~~~h~~~f~~e~~~v~~~~~~~~~e~l~LrPts 112 (477)
T PRK08661 33 VKGCMVIKPYGYAIWENIQKILDKLFKETGHENVYFPLLIPESLLEKEKEHVEGFAPEVAWVTHGGGEKLEEKLALRPTS 112 (477)
T ss_pred CCceEEECccHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHhhhcCchhhcccccEEEEccCCCccCceEEEecCC
Confidence 679999999999999999999999999999999999999 332 33555689999999877 5689999999
Q ss_pred ----cHHHHHHHHhCCCCceeEEEecCeeecCCCCC---CCcceeEeEEEEeCCCCccchH---HHHHHHHHHH-HHcCC
Q 000993 810 ----RLPFIRWAISNQKSSFKRYEISSVYRRAIGHS---PPNRYLQGDFDIIGGASALTEA---EVLKVTMDIV-TRFFH 878 (1196)
Q Consensus 810 ----T~~iaR~~a~~~~~P~r~~Y~G~VfR~e~~~~---~~~ef~Q~GvEiiG~~~~~aDa---EvI~la~~~L-~~lgi 878 (1196)
|..++|.+.+++.+|+|+|++|+|||+|.... |.+||+|.+.+.+-.....++. +++.+..+++ +.||+
T Consensus 113 E~~i~~~~~~~i~SyrdLPlrl~q~~~vfR~E~~~rgl~R~rEF~~~E~h~~~~~~eea~~e~~~~l~~y~~i~~~~Lgl 192 (477)
T PRK08661 113 ETIIYPMYKKWIQSYRDLPLLYNQWVNVVRWETKTRPFLRTREFLWQEGHTAHATEEEAEEETLEMLEIYKEFFEDYLAI 192 (477)
T ss_pred cHHHHHHHHhhhcchhhcCHHHhcccceeeCCCCCCCcceeeeEEEcceeeeeCCHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 77888888777778999999999999976543 5567999999986444344444 4455556666 55665
Q ss_pred CCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHh
Q 000993 879 AESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRF 958 (1196)
Q Consensus 879 ~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~ 958 (1196)
. +.+..- ++ + + + +
T Consensus 193 p--~~~~~~--------------~~-~-----------e---------k--------------------------f---- 205 (477)
T PRK08661 193 P--VIIGKK--------------TE-W-----------E---------K--------------------------F---- 205 (477)
T ss_pred e--EEEEec--------------Ch-H-----------H---------h--------------------------h----
Confidence 3 222110 00 0 0 0 0
Q ss_pred cCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcccccccccccccc
Q 000993 959 CGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGG 1038 (1196)
Q Consensus 959 ~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GG 1038 (1196)
.|. ...+.+|..+..|...-.|++|..- -
T Consensus 206 ~ga--------------------------------~~~~~ie~~~~dgr~~q~gt~~~Lg-------------------~ 234 (477)
T PRK08661 206 AGA--------------------------------DYTYTIEAMMPDGKALQAGTSHYLG-------------------Q 234 (477)
T ss_pred CCC--------------------------------cceeEEEEEeCCCCEEEEEEecccc-------------------c
Confidence 010 0012222222212222233333110 0
Q ss_pred ccchhhhhccccccccccCCCCCCCcceecccH-HHHHhhccC------CCCCCCCCCCceEEEEEcC-----CCchHHH
Q 000993 1039 RYDYLLHRMWDREYVGYASRTNPPSGVGASLAL-ETIIQHYPV------DFKPVRNEAGTSVLVCSRG-----GGGLLVE 1106 (1196)
Q Consensus 1039 RYD~L~~~fg~~~~~~~~g~~~~~pAvGfaigl-erl~~~L~~------~~~~~~~~~~~~vlv~~~~-----~~~~~~~ 1106 (1196)
++.++|+-. +...-|... .+ .=.++|+ +|++.+|.. +...+...+|.+|+|++.. .+....+
T Consensus 235 ---~~s~~f~i~-y~d~~g~~~-~v-~~~s~G~~~R~i~alie~~~D~~Gl~lP~~iAP~qV~Iipi~~~~~~~~~~~~~ 308 (477)
T PRK08661 235 ---NFAKAFDIK-FQDKDGKLE-YV-HQTSWGVSTRLIGALIMTHGDDKGLVLPPKIAPIQVVIVPIFKKEEKKEEVLEY 308 (477)
T ss_pred ---chhHhcCCE-EECCCCCEe-ee-EEecccHHHHHHHHHHHHhCccCCCccCcccCCCeEEEEEecCCCcCCHHHHHH
Confidence 122222211 001111111 12 2224554 999887751 2222233567899999982 1456788
Q ss_pred HHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 000993 1107 RMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1186 (1196)
Q Consensus 1107 a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~ 1186 (1196)
|.++++.||+.|++|+++...+.++++++++|+++|+|++|+||++|+++|+|+|+++++|++..++++++++.+++.++
T Consensus 309 a~~l~~~Lr~~GirV~lD~r~~~s~gkK~~~ae~~GvP~~IiIG~~ele~~~V~ik~rdtgek~~v~~~el~~~l~~~l~ 388 (477)
T PRK08661 309 AKELAEELKKAGIRVKLDDRSDKTPGWKFNEWELKGVPLRIEIGPRDLENNTVVLVRRDTLEKETVPLDELVEKVPELLE 388 (477)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECcchhhcCeEEEEECCCCceEEEEHHHHHHHHHHHHH
Confidence 99999999999999998874468999999999999999999999999999999999999999999999999998877765
Q ss_pred hh
Q 000993 1187 SQ 1188 (1196)
Q Consensus 1187 ~~ 1188 (1196)
.+
T Consensus 389 ~~ 390 (477)
T PRK08661 389 EI 390 (477)
T ss_pred HH
Confidence 44
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-24 Score=251.08 Aligned_cols=298 Identities=37% Similarity=0.658 Sum_probs=223.3
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.+++.++|+....+|.|+||+|+.+..+.++..+|||.|..+... ....+.++|+..+..+.|++|+++.++|.+....
T Consensus 44 ~sr~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e-~s~~rvl~~~~s~a~feh~g~~~~~ha~~~~~~~ 122 (516)
T KOG1033|consen 44 TSREANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNRE-ESRSRVLREVSSLAEFEHPGIKRYFHAWYERPPL 122 (516)
T ss_pred hhhhhccccccccccccCccccCCccccccchhhHHHHhcccchh-hhhhhhhccccchhhhcccchhhheeceecCCCC
Confidence 688999999999999999999999999988989999998876543 3456788999999999999999999999876541
Q ss_pred ccCC---------C------C---c--------------CCC----------Ccccccccccccc---------------
Q 000993 456 DFDG---------D------S---M--------------WGS----------GTLASSTFSNRAA--------------- 478 (1196)
Q Consensus 456 ~~~~---------~------~---~--------------~~~----------g~~~~~~~~~~~~--------------- 478 (1196)
.+-. + . + +.+ -..+....+....
T Consensus 123 ~~qe~~d~~~l~~~~~~~~~~l~sl~~~~~~~~q~~~~~~~~~A~e~s~~~~~~~v~~~~~s~s~~~~~s~s~~~~~~~~ 202 (516)
T KOG1033|consen 123 GWQEEMDLKLLDDETSSERSNLPSLSERRTSKRQTAELPRVSAAAESSFHVFRAIVPVENQSHSQESSSSISQHNGSRSE 202 (516)
T ss_pred cccchhhhhhhhccCCcchhccccccchhccchhhhhcccccccchhhhccccccCchhhcccCcccccchhhcccchhh
Confidence 0000 0 0 0 000 0000000000000
Q ss_pred ------------------------------------------------ccccc---------------------------
Q 000993 479 ------------------------------------------------SSADV--------------------------- 483 (1196)
Q Consensus 479 ------------------------------------------------~~~~v--------------------------- 483 (1196)
+...+
T Consensus 203 ~rk~s~~k~~~~~~~~~tdsd~~ed~~~~~~s~~~~~~~~~~s~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~ 282 (516)
T KOG1033|consen 203 FRKTSVSKASRFEGPDCTDSDLEEDEMQGSDSKESSRHEESGSSSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADV 282 (516)
T ss_pred hhhhhhccccccCCCccccccccccccccCcccCcccccccccccccccccccccCCchhhhhcccchhhhhccchhhhc
Confidence 00000
Q ss_pred -------------------------------------ccccccccccEEEEEeeecC-CCHHHHHhhcC---CCCHHHHH
Q 000993 484 -------------------------------------TGQENKLESTYLYIQMEYCP-RTLRQVFESYD---HFDKELAW 522 (1196)
Q Consensus 484 -------------------------------------~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---~l~e~~~~ 522 (1196)
.-........++||+|++|. .+|.+++.... ..+.....
T Consensus 283 d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~ 362 (516)
T KOG1033|consen 283 DSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKVGKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLML 362 (516)
T ss_pred cchhhhhhhhhhhhheeccccCCcccccCCCCchhhhccccccccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHH
Confidence 00000001236899999997 69999997544 36667888
Q ss_pred HHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCC
Q 000993 523 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 602 (1196)
Q Consensus 523 ~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 602 (1196)
.++.|++.|+.| ++.+|||+||.||+...+..+||+|||+......... .......++..+||.+||+
T Consensus 363 ~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~---------~~~~~a~~t~~~gt~~Yms 430 (516)
T KOG1033|consen 363 DIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDET---------VAPAAASHTQQVGTLLYMS 430 (516)
T ss_pred HHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeecccCCc---------ccchhhhhhhcccccccCC
Confidence 999999999999 9999999999999999999999999999876432220 0111234677899999999
Q ss_pred chhccCCCCCCCcchhHHHHHHHHHhhcCCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHH
Q 000993 603 PEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 682 (1196)
Q Consensus 603 PE~l~~~~~~s~ksDVwSlGviLyELltPf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~e 682 (1196)
||++.+ ..|+.++||||||+||+|++++|....++...+..++ .+.+||.+....|....|+.+|+.+.|.+||++.+
T Consensus 431 PEQi~g-~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r-~g~ip~~~~~d~p~e~~ll~~lls~~p~~RP~~~~ 508 (516)
T KOG1033|consen 431 PEQIRG-QQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIR-DGIIPPEFLQDYPEEYTLLQQLLSPSPEERPSAIE 508 (516)
T ss_pred HHHHhh-hhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhh-cCCCChHHhhcCcHHHHHHHHhcCCCcccCchHHH
Confidence 999999 6899999999999999999999999999888888777 67788766666778889999999999999997766
Q ss_pred HHhccC
Q 000993 683 LLQDAL 688 (1196)
Q Consensus 683 iL~~~~ 688 (1196)
.-.|.|
T Consensus 509 ~~~~~~ 514 (516)
T KOG1033|consen 509 VALHEF 514 (516)
T ss_pred Hhhhhh
Confidence 665554
|
|
| >PRK03991 threonyl-tRNA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.5e-22 Score=242.69 Aligned_cols=347 Identities=13% Similarity=0.112 Sum_probs=237.8
Q ss_pred CCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce------eecCCCcccccceEEEeecCCceEeecCCCcHHHH
Q 000993 741 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI 814 (1196)
Q Consensus 741 ~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia 814 (1196)
..|..-|+|..+.+++.|++.+++.+.++||.+|.||.+ ...++.+.+.++||.+ +.+++.++|||.-+.+..
T Consensus 216 ~~G~~~~~P~G~~i~~~L~~~~~~~~~~~G~~~V~tP~~~~~~~~~~sgh~~~f~e~my~v-~~~~e~l~Lrp~~c~~~~ 294 (613)
T PRK03991 216 DVGHMRYYPKGRLIRDLLEDYVYNLVVELGAMPVETPIMYDLSHPAIREHADKFGERQYRV-KSDKKDLMLRFAACFGQF 294 (613)
T ss_pred CeeeEEEEcHHHHHHHHHHHHHHHHHHHCCCEEEECCeecChhHHhhcccccccchhceEe-cCCCceEEEecCCCHHHH
Confidence 468889999999999999999999999999999999998 3344567778999987 445789999996666666
Q ss_pred HHHHh----CCCCceeEEEecC-eeecCCCCC-----CCcceeEeEEEEeCCC-Cccch--HHHHHHHHHHHHHcCCCCc
Q 000993 815 RWAIS----NQKSSFKRYEISS-VYRRAIGHS-----PPNRYLQGDFDIIGGA-SALTE--AEVLKVTMDIVTRFFHAES 881 (1196)
Q Consensus 815 R~~a~----~~~~P~r~~Y~G~-VfR~e~~~~-----~~~ef~Q~GvEiiG~~-~~~aD--aEvI~la~~~L~~lgi~~~ 881 (1196)
.++.. ++..|+|+|.+|+ +||+|.++. |.++|+|.++++|+.+ +...+ .+++.++.++++.||+.
T Consensus 295 ~~~~~~~~SyrdLPlr~~e~~~~~fR~E~~g~l~GL~RvReF~~~D~h~f~~~~eqa~~e~~~~l~~~~~i~~~lGl~-- 372 (613)
T PRK03991 295 LMLKDMTISYKNLPLKMYELSTYSFRLEQRGELVGLKRLRAFTMPDMHTLCKDMEQAMEEFEKQYEMILETGEDLGRD-- 372 (613)
T ss_pred HHHhCCcCchhhCChhhheecchheeCCCCCCCcCcccccceEeeeEEEEECCHHHHHHHHHHHHHHHHHHHHHcCCC--
Confidence 55544 2346999999999 999987542 5567999999999985 33222 37799999999999995
Q ss_pred eEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCC
Q 000993 882 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 961 (1196)
Q Consensus 882 ~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~ 961 (1196)
+.+.++... .+.+. ..+.+..++.... ++-. +....|.
T Consensus 373 ~~~~~~~t~---df~~~------~~~~l~~~l~~~g-------------------------~~~~--------~~~~~g~ 410 (613)
T PRK03991 373 YEVAIRFTE---DFYEE------NKDWIVELVKREG-------------------------KPVL--------LEILPER 410 (613)
T ss_pred eEEEecCHH---HHhhh------HHHHHHHHHHHcC-------------------------CCEE--------ecccCCc
Confidence 788776531 11110 0111222222211 0000 0000000
Q ss_pred hhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccc
Q 000993 962 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD 1041 (1196)
Q Consensus 962 ~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD 1041 (1196)
. .-+| .++.|.+...-|-..-.| ++=-|+.|
T Consensus 411 ~--------------------------~~yg--~kie~~~~d~~gr~~q~~--------------------T~qld~~~- 441 (613)
T PRK03991 411 K--------------------------HYWV--LKVEFAFIDSLGRPIENP--------------------TVQIDVEN- 441 (613)
T ss_pred c--------------------------ccCc--CcEEEEEeCCCCCEEEEe--------------------eeecCccc-
Confidence 0 0001 122222221111111122 12223333
Q ss_pred hhhhhccccccccccCCCCCCC-cceec-cc-HHHHHhhccCCCC----------CCCCCCCceEEEEEcCCCchHHHHH
Q 000993 1042 YLLHRMWDREYVGYASRTNPPS-GVGAS-LA-LETIIQHYPVDFK----------PVRNEAGTSVLVCSRGGGGLLVERM 1108 (1196)
Q Consensus 1042 ~L~~~fg~~~~~~~~g~~~~~p-AvGfa-ig-lerl~~~L~~~~~----------~~~~~~~~~vlv~~~~~~~~~~~a~ 1108 (1196)
.++|+-. +...-|... .| -+|.+ +| ++|++.+|.+... .+...+|.+|+|++.+ +....+|.
T Consensus 442 --~~~f~l~-y~d~~g~~~-~Pviih~~~~GsieR~i~aliE~~~~~~~~g~gl~~P~~lAP~qV~IIpi~-e~~~~~A~ 516 (613)
T PRK03991 442 --AERFGIK-YVDENGEEK-YPIILHCSPTGSIERVIYALLEKAAKEEEEGKVPMLPTWLSPTQVRVIPVS-ERHLDYAE 516 (613)
T ss_pred --chhCCCE-EECCCCCEe-eCEEEEECCEeHHHHHHHHHHHHhCCccccCceeEcCccccCceEEEEEeC-HHHHHHHH
Confidence 2344321 112223322 34 34654 65 9999888752111 2233578899999996 77889999
Q ss_pred HHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 000993 1109 ELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1187 (1196)
Q Consensus 1109 ~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~ 1187 (1196)
++++.||+.|++|+++.. +.++++++++|++.|+|++|+||++|+++|+|+||++.++++..++++++++.|++.++.
T Consensus 517 eIa~~Lr~~GirV~lDdr-~~slgkKir~A~~~GiP~iIVIG~kEle~g~VtVr~R~t~eq~~v~l~eli~~l~~~~~~ 594 (613)
T PRK03991 517 EVADKLEAAGIRVDVDDR-DESLGKKIRDAGKEWIPYVVVIGDKEMESGKLTVTIREESEKVEMTLEELIERIKEETKG 594 (613)
T ss_pred HHHHHHHhCCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEECcchhhCCeEEEEECCCCceEEeeHHHHHHHHHHHHhc
Confidence 999999999999998876 679999999999999999999999999999999999999999999999999999888763
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.5e-23 Score=217.14 Aligned_cols=157 Identities=25% Similarity=0.366 Sum_probs=121.3
Q ss_pred CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCC
Q 000993 504 RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPT 582 (1196)
Q Consensus 504 gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~ 582 (1196)
|+|.+++... ..+++.+++.++.||+.||+|||+++ ||+|||++.++.+|+ ||+++....
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~----------- 61 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP----------- 61 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc-----------
Confidence 6789999864 46999999999999999999999998 999999999999999 999875421
Q ss_pred CCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhh-cCCC-C---Cc
Q 000993 583 DTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQ-KGEL-P---PS 654 (1196)
Q Consensus 583 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~-~~~~-p---~~ 654 (1196)
....||+.|||||++.+ ..|+.++|||||||++|||++ ||............+.. .... + +.
T Consensus 62 ---------~~~~g~~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (176)
T smart00750 62 ---------EQSRVDPYFMAPEVIQG-QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSN 131 (176)
T ss_pred ---------ccCCCcccccChHHhcC-CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCcccccc
Confidence 11268999999999988 578999999999999999997 77544332222222211 1111 1 11
Q ss_pred cccCCH--HHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 655 WVAKFS--EQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 655 ~~~~~~--~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
...... ++.++|++||..||.+||++.++++|+|.
T Consensus 132 ~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~ 168 (176)
T smart00750 132 LESVSAARSFADFMRVCASRLPQRREAANHYLAHCRA 168 (176)
T ss_pred HHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence 111222 58999999999999999999999999754
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >COG0441 ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-21 Score=235.67 Aligned_cols=356 Identities=16% Similarity=0.174 Sum_probs=253.2
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce------eecCCCcccccceEEEeecCCceEeecCCCcHH
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLP 812 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ 812 (1196)
....|+..|+|..+.+++.+++.++.....+||++|.||.+ ..+++++.+.+.||.+... +++++|||.-++.
T Consensus 207 ~~~~G~~~~~pkG~~ir~~le~y~~~~~~~~Gy~~V~TP~~~~~~l~~~SGH~~~y~e~mf~~~~~-~~~~~lKpmNCpg 285 (589)
T COG0441 207 EEGPGLPFWHPKGATIRNLLEDYVRTKLRSYGYQEVKTPVLADLELWELSGHWDNYKEDMFLTESD-DREYALKPMNCPG 285 (589)
T ss_pred ccCCcceEECCCcccHHHHHHHHHHHHHHhcCceEecCCeeeecccchhccchhhccccceeeccC-ChhheeeeccCHh
Confidence 57889999999999999999999999999999999999999 3445677789999977544 5999999944444
Q ss_pred HHHHHHh----CCCCceeEEEecCeeecCCCC---C--CCcceeEeEEEEeCCCCccch--HHHHHHHHHHHHHcCCCCc
Q 000993 813 FIRWAIS----NQKSSFKRYEISSVYRRAIGH---S--PPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAES 881 (1196)
Q Consensus 813 iaR~~a~----~~~~P~r~~Y~G~VfR~e~~~---~--~~~ef~Q~GvEiiG~~~~~aD--aEvI~la~~~L~~lgi~~~ 881 (1196)
-+.++.+ ++..|+|++..|.|||+|..+ + +.|.|+|-+++||+..++..| .+++.++..+++.+|+++
T Consensus 286 h~~ifk~~~~SYR~LP~r~~E~g~v~R~E~SGal~GL~RvR~ftqdDaHifc~~dQi~~E~~~~~~~i~~v~~~fg~~~- 364 (589)
T COG0441 286 HILIFKSGLRSYRELPLRLAEFGYVYRYEKSGALHGLMRVRGFTQDDAHIFCTPDQIKDEFKGILELILEVYKDFGFTD- 364 (589)
T ss_pred HHHHHhcCCcceeccchhhhhcceeecccCcchhhccccccceeecccceeccHHHHHHHHHHHHHHHHHHHHhcCCce-
Confidence 4455544 234699999999999998865 2 555699999999999777555 489999999999999985
Q ss_pred eEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCC
Q 000993 882 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 961 (1196)
Q Consensus 882 ~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~ 961 (1196)
|.+.++.+. +.+|.++.|-.+...+...++ ..++.-...+.-.+ +.|+
T Consensus 365 y~~~ls~r~------k~ig~d~~W~~a~~~l~~al~----------------------~~~~~~~~~~G~~a----FyGP 412 (589)
T COG0441 365 YEVKLSTRP------KFIGSDEMWDKAEAALREALK----------------------EIGVEYVEEPGEGA----FYGP 412 (589)
T ss_pred EEEEEecCC------cccCChhhhHHHHHHHHHHHH----------------------hhCceeeecCCceE----EECc
Confidence 999999876 455666655443322222211 11111000000111 1222
Q ss_pred hhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccc
Q 000993 962 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD 1041 (1196)
Q Consensus 962 ~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD 1041 (1196)
++.|-+...-|-..-.|+|.--|.. .-|+|
T Consensus 413 ----------------------------------Kid~~v~Dalgr~~q~~TIQlDf~l----------------peRF~ 442 (589)
T COG0441 413 ----------------------------------KIDFQVKDALGREWQLGTIQLDFNL----------------PERFD 442 (589)
T ss_pred ----------------------------------ccceEEEeccCcceecceEEEecCC----------------hhhce
Confidence 1222111122223334444322211 11111
Q ss_pred hhhhhccccccccccCC-CCCCCcceeccc--HHHHHhhccC---CCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHH
Q 000993 1042 YLLHRMWDREYVGYASR-TNPPSGVGASLA--LETIIQHYPV---DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELW 1115 (1196)
Q Consensus 1042 ~L~~~fg~~~~~~~~g~-~~~~pAvGfaig--lerl~~~L~~---~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr 1115 (1196)
-. +++.-|. ++++ -+.-|+. +||.+.+|.+ +..+.+ .+|++|.|++++ ++...+|.++++.|+
T Consensus 443 -------l~-Yv~~d~~~~~Pv-miHrai~GSiERfi~iLiE~~~G~~P~W-LaPvQv~VipV~-~~~~~ya~~v~~~L~ 511 (589)
T COG0441 443 -------LE-YVDEDGEKKRPV-IIHRAILGSIERFIGILLEHYAGALPTW-LAPVQVRVIPVA-DEHLDYAKEVAEKLR 511 (589)
T ss_pred -------EE-EEcCCCCccCCE-EEEeccchhHHHHHHHHHHhccCCCccc-CCccEEEEEEeC-hHHHHHHHHHHHHHH
Confidence 00 0111111 2222 3444444 8999888763 333333 578999999996 777899999999999
Q ss_pred HcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHhhcc
Q 000993 1116 EENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQFR 1190 (1196)
Q Consensus 1116 ~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~~~~ 1190 (1196)
++|++|+++.. +.+++++++.|....+|++|++|++|.++++|++|...++++..+++++++..+++.+++...
T Consensus 512 ~~giRvdvD~~-~e~l~kKIR~a~~~kipyiiVvG~kE~e~~~v~vR~r~~~~~~~~~l~e~i~~ik~e~~~~~~ 585 (589)
T COG0441 512 KAGIRVDIDDR-NEKLGKKIREAGTQKIPYVIVVGDKEVETGTVVVRRRGGKQQKSMTLEELVEELKKEIEGRPN 585 (589)
T ss_pred HcCCeeeeccc-ccchHHHHHHHHhcCCCEEEEEchhhhccCceEEEEccCCccccccHHHHHHHHHHHhhcccC
Confidence 99999998887 779999999999999999999999999999999999999999999999999999998875543
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.8e-22 Score=231.39 Aligned_cols=175 Identities=19% Similarity=0.122 Sum_probs=129.9
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEcc-CCcEEEEEEEecCCC---CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeec
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKL-DGRHYAVKKIRLKDK---SLPVNDRILREVATLSRLQHQHVVRYYQAWFET 452 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~-~g~~vAVK~i~~~~~---~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~ 452 (1196)
....++|.+.+.||+|+||+||+|+++. +++.||||++..... .......+.+|+.+|+.++|+||++.+..+
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 3456789999999999999999999886 688889998753211 122345689999999999999998643211
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~g 531 (1196)
...|+|||||+| +|. .+.. .. ...++.|+++|
T Consensus 91 ----------------------------------------~~~~LVmE~~~G~~L~-~~~~---~~---~~~~~~~i~~a 123 (365)
T PRK09188 91 ----------------------------------------GKDGLVRGWTEGVPLH-LARP---HG---DPAWFRSAHRA 123 (365)
T ss_pred ----------------------------------------CCcEEEEEccCCCCHH-HhCc---cc---hHHHHHHHHHH
Confidence 125899999976 675 2221 11 14678999999
Q ss_pred HHHHHhCCCcccCC-CcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 532 LAHIHGQGIIHRDL-TPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 532 L~yLHs~gIiHrDL-Kp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
|+|||++||+|||| ||+|||++.++.+||+|||+|+.+......... ....+-++.++++.|+|||.+..
T Consensus 124 L~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~-------~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 124 LRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRI-------AAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred HHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhh-------hhhhhhhhhhccCccCCcccCCh
Confidence 99999999999999 999999999999999999999876432100000 00012246688999999998865
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.3e-20 Score=207.59 Aligned_cols=253 Identities=30% Similarity=0.501 Sum_probs=193.2
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCch-hHHHHHHHHHHHHhcCCC-CeeeeeeeeeecCccccCCC
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-VNDRILREVATLSRLQHQ-HVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~-~~~~~~~Ev~iL~~L~Hp-nIV~l~~~~~e~~~~~~~~~ 460 (1196)
|.+.+.||.|+||.||++.+. ..+++|.+........ ....+.+|+.+++.+.|+ +|++++..+..
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--------- 69 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQD--------- 69 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEec---------
Confidence 778899999999999999987 8899999876554433 567899999999999988 79999987622
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHH
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD---HFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~---~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....+++++|+.+ ++.+++.... .+....+..++.|++.++.|+|
T Consensus 70 -------------------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H 118 (384)
T COG0515 70 -------------------------------EGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH 118 (384)
T ss_pred -------------------------------CCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 2237999999975 7777776654 7999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCC-CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC--CCCC
Q 000993 537 GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PKID 613 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~~s 613 (1196)
+.+++|||+||+||+++..+ .++++|||+++........... ........||..|+|||.+.+. ..+.
T Consensus 119 ~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~---------~~~~~~~~~t~~~~~pe~~~~~~~~~~~ 189 (384)
T COG0515 119 SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSI---------PALPSTSVGTPGYMAPEVLLGLSLAYAS 189 (384)
T ss_pred hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccc---------cccccccccccccCCHHHhcCCCCCCCC
Confidence 99999999999999999988 7999999999854322110000 0123567899999999999874 4688
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHH---HHHHHHHhhhcC-C-CCCccccC-----CHHHHHHHHHcccCCCCCCCCH
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQKG-E-LPPSWVAK-----FSEQESLLRRLMSPSPSDRPSA 680 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~---~~~~~~~l~~~~-~-~p~~~~~~-----~~~l~~LI~~cL~~dP~~RPta 680 (1196)
...|+||+|++++++++ ||..... .......+.... . ........ ...+.+++.+|+..+|..|.+.
T Consensus 190 ~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 269 (384)
T COG0515 190 SSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSS 269 (384)
T ss_pred chHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCH
Confidence 99999999999999885 6655442 222222222221 1 11111111 1367899999999999999999
Q ss_pred HHHHhcc
Q 000993 681 TELLQDA 687 (1196)
Q Consensus 681 ~eiL~~~ 687 (1196)
.....+.
T Consensus 270 ~~~~~~~ 276 (384)
T COG0515 270 SSDLSHD 276 (384)
T ss_pred HHHhhch
Confidence 9888763
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.1e-22 Score=247.80 Aligned_cols=260 Identities=24% Similarity=0.357 Sum_probs=190.9
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEecC---CCCch-hHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 385 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK---DKSLP-VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 385 ~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~---~~~~~-~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
....+|.|++|.|+.+......+.++.|..+.+ ..+.. ....+..|+.+-..+.|||++..+..+.+.
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~-------- 393 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEI-------- 393 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhc--------
Confidence 457899999998888888777777777765532 11111 222366788888889999997765443221
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
...+-.||||+++|..++.....+...++..++.|++.|+.|||+.||
T Consensus 394 --------------------------------~~~~~~mE~~~~Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~Gi 441 (601)
T KOG0590|consen 394 --------------------------------DGILQSMEYCPYDLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGL 441 (601)
T ss_pred --------------------------------ccchhhhhcccHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCc
Confidence 112223999999999999888889999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
.||||||+|+++..+|.+||+|||.+.....+. ........+.+|+..|+|||++.+...-...+||||
T Consensus 442 ahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~-----------e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS 510 (601)
T KOG0590|consen 442 AHRDLKLENLLVTENGILKIIDFGAASVFRYPW-----------EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWS 510 (601)
T ss_pred eeccCccccEEEecCCceEEeecCcceeeccCc-----------chhhhhhcCcccCCcCcCcccccccccCcchhhhhh
Confidence 999999999999999999999999997653221 111133466799999999999998443346799999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhcCC--C----CCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQKGE--L----PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~~~--~----p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
.||+++.|.+ ||.................. . ...+...+.+.+.+|.+||++||.+|.|+++|++++|++.
T Consensus 511 ~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~ 590 (601)
T KOG0590|consen 511 CGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRS 590 (601)
T ss_pred ccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhh
Confidence 9999999986 66544332221111110100 0 1122333446789999999999999999999999999998
Q ss_pred chHH
Q 000993 692 MEYE 695 (1196)
Q Consensus 692 ~~~~ 695 (1196)
....
T Consensus 591 i~~c 594 (601)
T KOG0590|consen 591 IECC 594 (601)
T ss_pred cceE
Confidence 7543
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.1e-21 Score=207.25 Aligned_cols=202 Identities=22% Similarity=0.354 Sum_probs=168.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
-.|++.++||+|+||+.+.|++..++++||||.-..+.. ..++..|....+.| ..++|..+| +|=
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~----APQLrdEYr~YKlL~g~~GIP~vY-YFG--------- 93 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE----APQLRDEYRTYKLLGGTEGIPQVY-YFG--------- 93 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccCC----cchHHHHHHHHHHHcCCCCCCcee-eec---------
Confidence 479999999999999999999999999999997654433 34577788888888 568888876 221
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
++..+-.+|||+.+.||.|++.-. .+|+...+..++.|++.-++|+|++
T Consensus 94 ------------------------------qeG~~NiLVidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k 143 (449)
T KOG1165|consen 94 ------------------------------QEGKYNILVIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEK 143 (449)
T ss_pred ------------------------------cccchhhhhhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhc
Confidence 223455799999999999999854 5699999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCC-----CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 539 GIIHRDLTPNNIFFDARN-----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~-----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
.+|+|||||+|+||...+ .+.|+|||+|+.+..+...+...+ +.+.+..||.+||+--...| .+.+
T Consensus 144 ~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPY--------rE~KSLsGTARYMSINTHlG-rEQS 214 (449)
T KOG1165|consen 144 DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPY--------REHKSLSGTARYMSINTHLG-REQS 214 (449)
T ss_pred ceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCcc--------ccccccccceeeeEeecccc-chhh
Confidence 999999999999997654 489999999999877765555443 45678899999999998888 5789
Q ss_pred CcchhHHHHHHHHHhhc---CCchh
Q 000993 614 EKADMYSLGIVFFELWH---PFSTA 635 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~ 635 (1196)
...|+-|||.++++.+. ||.+.
T Consensus 215 RRDDLEaLGHvFmYFLRGsLPWQGL 239 (449)
T KOG1165|consen 215 RRDDLEALGHVFMYFLRGSLPWQGL 239 (449)
T ss_pred hhhhHHHhhhhhhhhccCCCccccc
Confidence 99999999999888884 77654
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.9e-22 Score=234.12 Aligned_cols=243 Identities=28% Similarity=0.413 Sum_probs=196.6
Q ss_pred eeccCCcEEEEEEEEc---cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCccccCCCCcC
Q 000993 388 PLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDGDSMW 463 (1196)
Q Consensus 388 ~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~~~~~~~ 463 (1196)
.+|.|+||.|++++.. ..|..||+|+.+..............|-.++..++ ||.+|+++.+|
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyaf-------------- 66 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAF-------------- 66 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeee--------------
Confidence 3799999999877643 45778999998765433333335556777888886 99999998776
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcc
Q 000993 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 542 (1196)
Q Consensus 464 ~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiH 542 (1196)
+....+|++++|.. |.|...+.....+++.....+...++.+++++|+.+|+|
T Consensus 67 --------------------------qt~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiy 120 (612)
T KOG0603|consen 67 --------------------------QTDGKLYLILDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAY 120 (612)
T ss_pred --------------------------ccccchhHhhhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHH
Confidence 23556789999996 588888888889999999999999999999999999999
Q ss_pred cCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHH
Q 000993 543 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622 (1196)
Q Consensus 543 rDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlG 622 (1196)
||+|++||+++.+|++++.|||+++..-.. +..|||..|||||++.+ ...++|+||||
T Consensus 121 rd~k~enilld~~Ghi~~tdfglske~v~~-------------------~~~cgt~eymApEI~~g---h~~a~D~ws~g 178 (612)
T KOG0603|consen 121 RDYKLENVLLLLEGHIKLTDFGLSKEAVKE-------------------KIACGTYEYRAPEIING---HLSAADWWSFG 178 (612)
T ss_pred hcccccceeecccCccccCCchhhhHhHhh-------------------hhcccchhhhhhHhhhc---cCCcccchhhh
Confidence 999999999999999999999999865322 22399999999999985 58899999999
Q ss_pred HHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhccCCCCchH
Q 000993 623 IVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPPQMEY 694 (1196)
Q Consensus 623 viLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~~~~~~~~~ 694 (1196)
++++||+| ||.. +....++..+...|.. .++.+++++..++..+|..|.. ..++++|+++.+..+
T Consensus 179 vl~felltg~~pf~~----~~~~~Il~~~~~~p~~---l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~ 251 (612)
T KOG0603|consen 179 VLAFELLTGTLPFGG----DTMKRILKAELEMPRE---LSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDW 251 (612)
T ss_pred hhHHHHhhCCCCCch----HHHHHHhhhccCCchh---hhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeH
Confidence 99999997 8877 3344444444444443 4568899999999999999975 588999999999988
Q ss_pred HHHHH
Q 000993 695 ELLDN 699 (1196)
Q Consensus 695 ~~~~~ 699 (1196)
+-+..
T Consensus 252 ~~l~~ 256 (612)
T KOG0603|consen 252 NELEA 256 (612)
T ss_pred hhHhh
Confidence 75533
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.8e-20 Score=193.28 Aligned_cols=256 Identities=21% Similarity=0.245 Sum_probs=189.4
Q ss_pred CCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCC-CCeeeeeeeeeecC
Q 000993 375 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH-QHVVRYYQAWFETG 453 (1196)
Q Consensus 375 ~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~H-pnIV~l~~~~~e~~ 453 (1196)
+.-...+.|.++++||.|+||.+|+|.+..+|..||||+-+.+.. ..++..|..+.+.|+| ..|..+..+.
T Consensus 9 ~~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~----hpqL~yEskvY~iL~~g~GiP~i~~y~---- 80 (341)
T KOG1163|consen 9 EELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK----HPQLLYESKVYRILQGGVGIPHIRHYG---- 80 (341)
T ss_pred hhheeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC----CcchhHHHHHHHHhccCCCCchhhhhc----
Confidence 334456899999999999999999999999999999997653322 2357789999999976 4455544332
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL 532 (1196)
.+..+-.+||+..+.+|.+++.- ...|+...++.++-|++.-+
T Consensus 81 ------------------------------------~e~~ynvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~Ri 124 (341)
T KOG1163|consen 81 ------------------------------------TEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRI 124 (341)
T ss_pred ------------------------------------cccccceeeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHH
Confidence 12445689999999999999974 45699999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCC---CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
+|+|.+++|||||||+|+|..-+ ..+.|+|||+|+.+.......... .+..+...||.+|++--+..+
T Consensus 125 EyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIp--------yre~r~ltGTaRYASinAh~g- 195 (341)
T KOG1163|consen 125 EYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIP--------YREDRNLTGTARYASINAHLG- 195 (341)
T ss_pred HHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccccccCc--------cccCCccceeeeehhhhhhhh-
Confidence 99999999999999999999654 348899999999876543322222 233466789999999988887
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHH---HHHHHHHhhhcCCCCC--ccccCCHHHHHHHHHcccCCCCCCCCHH
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQKGELPP--SWVAKFSEQESLLRRLMSPSPSDRPSAT 681 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~---~~~~~~~l~~~~~~p~--~~~~~~~~l~~LI~~cL~~dP~~RPta~ 681 (1196)
-..+...|+-|+|.+|..+.. ||.+... .+...++...+-..|. -....+.++...+.-|=..-=.+-|...
T Consensus 196 ~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ 275 (341)
T KOG1163|consen 196 IEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYM 275 (341)
T ss_pred hhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHH
Confidence 457889999999988877753 8876543 3333333333333333 1233445777788888776666667654
Q ss_pred HH
Q 000993 682 EL 683 (1196)
Q Consensus 682 ei 683 (1196)
-+
T Consensus 276 yl 277 (341)
T KOG1163|consen 276 YL 277 (341)
T ss_pred HH
Confidence 44
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-19 Score=209.90 Aligned_cols=255 Identities=22% Similarity=0.284 Sum_probs=183.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCC-cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCC----CCeeeeeeeeeecCccc
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDG-RHYAVKKIRLKDKSLPVNDRILREVATLSRLQH----QHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g-~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~H----pnIV~l~~~~~e~~~~~ 456 (1196)
.|.+.++||+|+||.||+|.+..++ ..+|+|.......... . .+..|..++..+.+ +++..+++...
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~-~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~------ 90 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP-S-VLKIEIQVLKKLEKKNGPSHFPKLLDHGR------ 90 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC-c-cchhHHHHHHHHhhhcCCCCCCEEEEecc------
Confidence 8999999999999999999998664 6788888765332211 1 57778888888863 57777765431
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+-||||+.++.+|.++.... +.|+...+..++.|++.+|++
T Consensus 91 ---------------------------------~~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~ 137 (322)
T KOG1164|consen 91 ---------------------------------STEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALED 137 (322)
T ss_pred ---------------------------------CCCceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHH
Confidence 124567999999999999988544 579999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCC-----CCeEEeccCcchhcc--ccccccCCCCCCCCCCcccc-CcCccccccCCCchhc
Q 000993 535 IHGQGIIHRDLTPNNIFFDAR-----NDIKIGDFGLAKFLK--LEQLDQDAAFPTDTGGVSVD-GTGQVGTYFYTAPEIE 606 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~-----~~vKL~DFGlA~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~GT~~Y~APE~l 606 (1196)
||+.|++||||||+|+++... ..+.|.|||+|+... ...... . ...+. .....||..|+++.+.
T Consensus 138 lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~--~------~~~r~~~~~~rGT~ry~S~~~H 209 (322)
T KOG1164|consen 138 LHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGN--L------RPPRPQKGLFRGTLRYASINVH 209 (322)
T ss_pred HHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcc--c------ccCCCCccCCCCccccccHHHh
Confidence 999999999999999999865 359999999998332 111100 0 00111 2345699999999999
Q ss_pred cCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHH--HHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHH
Q 000993 607 QGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQI--VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT 681 (1196)
Q Consensus 607 ~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~--~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ 681 (1196)
.+ ...+.+.|+||++.++.|++. ||........ ..................+.++..+...+-..+...+|...
T Consensus 210 ~~-~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~ 288 (322)
T KOG1164|consen 210 LG-IEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYE 288 (322)
T ss_pred CC-CccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHH
Confidence 98 578999999999999999985 7754432111 11111111111111122234667777777778999999888
Q ss_pred HHHhc
Q 000993 682 ELLQD 686 (1196)
Q Consensus 682 eiL~~ 686 (1196)
.+...
T Consensus 289 ~~~~~ 293 (322)
T KOG1164|consen 289 KLAEL 293 (322)
T ss_pred HHHHH
Confidence 87653
|
|
| >KOG4018 consensus Uncharacterized conserved protein, contains RWD domain [Function unknown] | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.5e-21 Score=199.01 Aligned_cols=119 Identities=24% Similarity=0.299 Sum_probs=104.5
Q ss_pred CcCCcceEeecCCCCCCCCccc-eeEEEEEeCCCCCCCCCceeeccCCCCCHHHHHHHHHHHHHHHHHhhhCCCeEEEee
Q 000993 13 RSKGRAQSKDHSSSTVDDNELL-SEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNL 91 (1196)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~Gm~miftl 91 (1196)
++.+..|+|++..+.++++++. ++.|.|++|++|||++|++++...+|+.++++..+++.|+.+|++|| ||+|||||
T Consensus 27 ~~~~~~f~v~iq~e~~e~d~~~~~~~l~~s~tEnYPDe~Pli~~~~~~~~~~~~i~~i~~~l~~~aeenL--GmaMiftL 104 (215)
T KOG4018|consen 27 SEDPPIFEVTIQYEEGENDEPKGSFILVFSLTENYPDEAPLIEAFENENLEDAEIEGILEKLQQEAEENL--GMAMIFTL 104 (215)
T ss_pred ccCCccceeeeecccccCCCccccEEEEEEccCCCCCCCcceeccccccccHHHHHHHHHHHHHHHHHhc--chHHHHHH
Confidence 3445569999999999888887 99999999999999999999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHhhCCCCccc---cCCCCcccccccccccCccccccc
Q 000993 92 VEAAQEFLSEIVPLGQSN---ESVPGLVTESSSQSFEGSAVSASK 133 (1196)
Q Consensus 92 ~~~~~e~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 133 (1196)
||++||||++++.++... +..-...++.+-+.|+|||||.|.
T Consensus 105 vss~ke~l~e~~~q~~~~e~~e~~~~~~ee~e~~kfhgt~VT~es 149 (215)
T KOG4018|consen 105 VSSAKEELNEIVEQQKAAEQREQEAREAEEEERKKFHGTPVTLES 149 (215)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCceehhh
Confidence 999999999999866555 222233366777999999999885
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.5e-20 Score=206.03 Aligned_cols=286 Identities=22% Similarity=0.269 Sum_probs=188.5
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCc-----------------------------------EEEEEEEecCC--
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGR-----------------------------------HYAVKKIRLKD-- 418 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~-----------------------------------~vAVK~i~~~~-- 418 (1196)
+.-.+++|++...||+|....||.|+...+|. +.|||.+-.-+
T Consensus 152 skFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~ 231 (598)
T KOG4158|consen 152 SKFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHD 231 (598)
T ss_pred cccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccC
Confidence 34457899999999999999999988764221 24566542211
Q ss_pred -CCchhHHHHHHHHH------HH--------Hh--------cCCCCeeeeeeeeeecCccccCCCCcCCCCccccccccc
Q 000993 419 -KSLPVNDRILREVA------TL--------SR--------LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSN 475 (1196)
Q Consensus 419 -~~~~~~~~~~~Ev~------iL--------~~--------L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~ 475 (1196)
.+....+.+.+|.- .+ +. -.|||||+++++|++....- -.+...++....
T Consensus 232 s~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~l-------Pda~~~YPdalp 304 (598)
T KOG4158|consen 232 SGDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVL-------PDAIERYPDALP 304 (598)
T ss_pred CchHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccC-------CchhhhCccccc
Confidence 11112233333321 11 11 26999999999997643210 001111111111
Q ss_pred ccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecC-
Q 000993 476 RAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA- 554 (1196)
Q Consensus 476 ~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~- 554 (1196)
. --.++.......+|+||.-.+.+|..++..+. .+.....-++.|+++|+.|||.+||.|||||++||||.-
T Consensus 305 ~------R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~-~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~Eld 377 (598)
T KOG4158|consen 305 A------RWYPSGAGEPKTLYLVMKRYRQTLREYLWTRH-RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELD 377 (598)
T ss_pred c------eecccccCCCceEEEehhcchhhHHHHHhcCC-CchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEec
Confidence 0 01122334567899999999999999997654 455667778899999999999999999999999999943
Q ss_pred -CC--CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC-----CCCcchhHHHHHHHH
Q 000993 555 -RN--DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK-----IDEKADMYSLGIVFF 626 (1196)
Q Consensus 555 -~~--~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-----~s~ksDVwSlGviLy 626 (1196)
|+ .+.|+|||.+-.-..... .. .+........|+..-||||+....+. .-.|+|.|+.|.+.|
T Consensus 378 dD~~P~LVvaDFGCcLAd~~hGl----ql-----py~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaY 448 (598)
T KOG4158|consen 378 DDEIPQLVVADFGCCLADDNHGL----QL-----PYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAY 448 (598)
T ss_pred CCCCcEEEEcccceeeecccccc----cc-----ccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHH
Confidence 32 478999998853221110 01 11112234568889999999765332 235899999999999
Q ss_pred Hhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH---HHHHh
Q 000993 627 ELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA---TELLQ 685 (1196)
Q Consensus 627 ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta---~eiL~ 685 (1196)
|++. ||+..-++...... .+..++|+-...+++.+++|+..+|+.||++|+++ ..+|+
T Consensus 449 EIfg~~NPFY~rGem~L~~r~-Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 449 EIFGRSNPFYKRGEMLLDTRT-YQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred HHhccCCcccccchheechhh-hhhhhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence 9996 99874443333333 23456777777788999999999999999999984 44554
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.4e-21 Score=231.35 Aligned_cols=272 Identities=21% Similarity=0.268 Sum_probs=196.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC--CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD--KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~--~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+|...+.||.+.|=+|.+|++. .|. |+||++-+.+ .+.+...+-++|++ .+.++|||.+++.-.-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~---------- 90 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVL---------- 90 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHH----------
Confidence 6778899999999999999987 444 9999987654 23334445556666 5667999999876331
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
......|+|-+|...+|+|.+..+.-+..-+...|+.||+.||.-+|..|
T Consensus 91 ------------------------------~t~kAAylvRqyvkhnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~g 140 (1431)
T KOG1240|consen 91 ------------------------------VTDKAAYLVRQYVKHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLG 140 (1431)
T ss_pred ------------------------------HhhHHHHHHHHHHhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 22455689999999999999998888888999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC----------
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW---------- 609 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---------- 609 (1196)
|+|+|||.+||||++-..+.|+||..-+....+. .+.+++.+--.+...-.+|.|||.+...
T Consensus 141 VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe--------DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~ 212 (1431)
T KOG1240|consen 141 VCHGDIKSENILITSWNWLYLTDFASFKPTYLPE--------DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDA 212 (1431)
T ss_pred ccccccccceEEEeeechhhhhcccccCCccCCC--------CCcccceEEEecCCceeeecChHhhhccccccccCCcc
Confidence 9999999999999999999999998765432221 1122222211122233479999986541
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccC--CHHHHHHHHHcccCCCCCCCCHHHHH
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAK--FSEQESLLRRLMSPSPSDRPSATELL 684 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~--~~~l~~LI~~cL~~dP~~RPta~eiL 684 (1196)
+..+++.||||+||++.||++ |......- ..-.......+...... ...++++|..|++.||.+|.++++.|
T Consensus 213 ~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL---~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL 289 (1431)
T KOG1240|consen 213 PLLTPAMDIFSAGCVIAELFLEGRPLFTLSQL---LAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYL 289 (1431)
T ss_pred cccChhhhhhhhhHHHHHHHhcCCCcccHHHH---HhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHH
Confidence 125789999999999999996 33222211 11111111111111110 12678999999999999999999999
Q ss_pred hc---cCCCCchHHHHHHHHHhcCCC
Q 000993 685 QD---ALPPQMEYELLDNILRMMHSS 707 (1196)
Q Consensus 685 ~~---~~~~~~~~~~~~~~~~~~~~~ 707 (1196)
+. .+|+...+.++..++..+...
T Consensus 290 ~~yrG~~FP~yFy~FL~~Y~~~~~~~ 315 (1431)
T KOG1240|consen 290 QKYRGLVFPEYFYSFLYDYLDRFVPL 315 (1431)
T ss_pred HhhhccccHHHHHHHHHHHHHhcCCc
Confidence 87 478888888888887766543
|
|
| >cd00670 Gly_His_Pro_Ser_Thr_tRS_core Gly_His_Pro_Ser_Thr_tRNA synthetase class II core domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.9e-20 Score=202.76 Aligned_cols=137 Identities=9% Similarity=0.129 Sum_probs=119.9
Q ss_pred hHhhHHHHHHHHHHHHHcCCccccccce----eecC--CCcccccceEEEeecC----CceEeecCCCcHHHHHHHHhC-
Q 000993 752 TELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG--DCPQFKRNTVKLLTHG----GDLLELSHELRLPFIRWAISN- 820 (1196)
Q Consensus 752 a~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~--~~~~~~~~my~f~D~~----G~~laLRPD~T~~iaR~~a~~- 820 (1196)
+.+++.|++.+++.|.++||++|.||+| .+.. +++...++||+|.|.+ |+.++||||.|+|++|+++.+
T Consensus 2 ~~~~~~l~~~~~~~~~~~G~~ei~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LrP~~~~~i~~~~~~~~ 81 (235)
T cd00670 2 TALWRALERFLDDRMAEYGYQEILFPFLAPTVLFFKGGHLDGYRKEMYTFEDKGRELRDTDLVLRPAACEPIYQIFSGEI 81 (235)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEECCeEcCHHHHhhcCCcccchhhcCeeccCcccccCCeEEEecCCCHHHHHHHhccC
Confidence 5678999999999999999999999999 2222 3577789999999988 899999999999999999874
Q ss_pred ---CCCceeEEEecCeeecCCCC---C-CCcceeEeEEEEeCCC--CccchHHHHHHHHHHHHHcCCCCceEEEeCcHH
Q 000993 821 ---QKSSFKRYEISSVYRRAIGH---S-PPNRYLQGDFDIIGGA--SALTEAEVLKVTMDIVTRFFHAESCDIHLNHGD 890 (1196)
Q Consensus 821 ---~~~P~r~~Y~G~VfR~e~~~---~-~~~ef~Q~GvEiiG~~--~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~~~ 890 (1196)
...|+|+||+|+|||+|.++ . +.+||+|+|+|+||.+ +..+++|++.++.++|+.||+. +.+.+++.+
T Consensus 82 ~~~~~lP~r~~~~g~~fR~E~~~~~gl~R~reF~q~e~~~~~~~~~~~~~~~e~~~~~~~~l~~lgl~--~~i~~~~~~ 158 (235)
T cd00670 82 LSYRALPLRLDQIGPCFRHEPSGRRGLMRVREFRQVEYVVFGEPEEAEEERREWLELAEEIARELGLP--VRVVVADDP 158 (235)
T ss_pred ccchhcCeeeeeecccccCCCCCCCCChhheeeeeceEEEEcCHHHHHHHHHHHHHHHHHHHHHcCCc--EEEEEccCh
Confidence 24699999999999998766 2 4457999999999998 6789999999999999999993 999999864
|
This domain is the core catalytic domain of tRNA synthetases of the subgroup containing glycyl, histidyl, prolyl, seryl and threonyl tRNA synthetases. It is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. These enzymes belong to class II aminoacyl-tRNA synthetases (aaRS) based upon their structure and the presence of three characteristic sequence motifs in the core domain. This domain is also found at the C-terminus of eukaryotic GCN2 protein kinase and at the N-terminus of the ATP phosphoribosyltransferase accessory subunit, HisZ and the accessory subunit of mitochondrial polymerase gamma (Pol gamma b) . Most class II tRNA synthetases are dimers, with this subgroup consisting of mostly homodimers. These enzymes attach a specific amino acid to the 3' OH group of ribose of the appropriate tRNA. |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.9e-20 Score=227.17 Aligned_cols=237 Identities=24% Similarity=0.379 Sum_probs=174.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
-.+|+.++.|-.|+||-||+++|+.+.+.+|+| ++.... +.|- +|.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l-------ilRn--ilt~a~npfvv---------------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL-------ILRN--ILTFAGNPFVV---------------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhc-ccccch-------hhhc--cccccCCccee----------------
Confidence 368999999999999999999999999999994 442211 1111 12222233222
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
|+=...+...++++.. ++.+++|||+.|
T Consensus 136 --------------------------------------------gDc~tllk~~g~lPvd--------mvla~Eylh~yg 163 (1205)
T KOG0606|consen 136 --------------------------------------------GDCATLLKNIGPLPVD--------MVLAVEYLHSYG 163 (1205)
T ss_pred --------------------------------------------chhhhhcccCCCCcch--------hhHHhHhhccCC
Confidence 2222333333333333 288999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+|||+||+|.+|+.-|++|+.|||+++............-........+.....||||.|.|||++.. ..|+..+|||
T Consensus 164 ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr-qgygkpvdww 242 (1205)
T KOG0606|consen 164 IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR-QGYGKPVDWW 242 (1205)
T ss_pred eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhh-hccCCCccHH
Confidence 999999999999999999999999999864322211111000001111233455699999999999887 4699999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC---CHHHHHhccCCCCch
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP---SATELLQDALPPQME 693 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP---ta~eiL~~~~~~~~~ 693 (1196)
++|+|+||.+- ||.+..+.+.+-..+......|..-....++++++|.++|..+|..|. .+-++.+|.||+.+.
T Consensus 243 amGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LD 322 (1205)
T KOG0606|consen 243 AMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLD 322 (1205)
T ss_pred HHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecc
Confidence 99999999983 999998888877777777777777666778999999999999999996 578899999999998
Q ss_pred HH
Q 000993 694 YE 695 (1196)
Q Consensus 694 ~~ 695 (1196)
|.
T Consensus 323 w~ 324 (1205)
T KOG0606|consen 323 WK 324 (1205)
T ss_pred cc
Confidence 86
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-19 Score=193.96 Aligned_cols=140 Identities=14% Similarity=0.119 Sum_probs=107.9
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchh------------------------HHHHHHHHHHHHhcCCCC
Q 000993 386 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV------------------------NDRILREVATLSRLQHQH 441 (1196)
Q Consensus 386 ~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~------------------------~~~~~~Ev~iL~~L~Hpn 441 (1196)
...||+|+||.||+|.+. +|+.||||+++....+... .....+|++.+..+.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 357999999999999997 8999999999754321111 112345999999998877
Q ss_pred eeeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHH
Q 000993 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKEL 520 (1196)
Q Consensus 442 IV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~ 520 (1196)
+....... ....+|||||++| ++.........++...
T Consensus 81 v~~p~~~~------------------------------------------~~~~~iVmE~i~g~~l~~~~~~~~~~~~~~ 118 (190)
T cd05147 81 IPCPEPIL------------------------------------------LKSHVLVMEFIGDDGWAAPRLKDAPLSESK 118 (190)
T ss_pred CCCCcEEE------------------------------------------ecCCEEEEEEeCCCCCcchhhhcCCCCHHH
Confidence 63322110 0112799999986 4444434456799999
Q ss_pred HHHHHHHHHHHHHHH-HhCCCcccCCCcCcEEecCCCCeEEeccCcchhc
Q 000993 521 AWHLFRQIVEGLAHI-HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 569 (1196)
Q Consensus 521 ~~~i~~qIa~gL~yL-Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~ 569 (1196)
+..++.|++.+|.|| |+.||+||||||+|||++ ++.++|+|||+|...
T Consensus 119 ~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 119 ARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEEEEEccccccC
Confidence 999999999999999 799999999999999998 578999999999753
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.5e-19 Score=187.31 Aligned_cols=141 Identities=23% Similarity=0.205 Sum_probs=110.1
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCch------------------------hHHHHHHHHHHHHhcCCCC
Q 000993 386 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP------------------------VNDRILREVATLSRLQHQH 441 (1196)
Q Consensus 386 ~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~------------------------~~~~~~~Ev~iL~~L~Hpn 441 (1196)
.+.||+|+||.||+|.+. +|+.||||+++....... ....+.+|...+..+.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 467999999999999988 999999999986432110 0123457899999999998
Q ss_pred eeeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCC-HHHHHhhcCCCCHHH
Q 000993 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT-LRQVFESYDHFDKEL 520 (1196)
Q Consensus 442 IV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gs-L~~~l~~~~~l~e~~ 520 (1196)
|......+. ...|+||||++|. +.........++...
T Consensus 81 i~~p~~~~~------------------------------------------~~~~lVmE~~~g~~~~~~~l~~~~~~~~~ 118 (190)
T cd05145 81 VPVPEPILL------------------------------------------KKNVLVMEFIGDDGSPAPRLKDVPLEEEE 118 (190)
T ss_pred CCCceEEEe------------------------------------------cCCEEEEEEecCCCchhhhhhhccCCHHH
Confidence 743332210 0138999999873 433323445688889
Q ss_pred HHHHHHHHHHHHHHHHh-CCCcccCCCcCcEEecCCCCeEEeccCcchhcc
Q 000993 521 AWHLFRQIVEGLAHIHG-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLK 570 (1196)
Q Consensus 521 ~~~i~~qIa~gL~yLHs-~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~ 570 (1196)
+..++.|++.+|.++|+ +||+||||||+|||++ ++.++|+|||+|+...
T Consensus 119 ~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 119 AEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVELD 168 (190)
T ss_pred HHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEEEEEcccceecC
Confidence 99999999999999999 9999999999999999 8999999999998653
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >cd00771 ThrRS_core Threonyl-tRNA synthetase (ThrRS) class II core catalytic domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-18 Score=198.64 Aligned_cols=149 Identities=13% Similarity=0.130 Sum_probs=128.5
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec--CCCcccccceEEEeecCCceEeecCCCcHHH
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELRLPF 813 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRPD~T~~i 813 (1196)
.++|+++++|.++.+++.|++.+++.|+++||++|.||.| ++. ++.+...++||++ +.+|+.++|||+.|+++
T Consensus 18 ~~~G~~~~~p~g~~l~~~l~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sg~~~~~~~~my~~-~~~~~~l~LRP~~~~~~ 96 (298)
T cd00771 18 AGPGLPFWLPKGAIIRNELEDFLRELQRKRGYQEVETPIIYNKELWETSGHWDHYRENMFPF-EEEDEEYGLKPMNCPGH 96 (298)
T ss_pred CCCcceEEcccHHHHHHHHHHHHHHHHHHcCCEEEECCeecCHHHHhhCCCccccccCceEe-ccCCceEEEcccCCHHH
Confidence 5789999999999999999999999999999999999999 332 3345578999999 45678999999999999
Q ss_pred HHHHHhC----CCCceeEEEecCeeecCCCC-----CCCcceeEeEEEEeCCCCcc-chH-HHHHHHHHHHHHcCCCCce
Q 000993 814 IRWAISN----QKSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGASAL-TEA-EVLKVTMDIVTRFFHAESC 882 (1196)
Q Consensus 814 aR~~a~~----~~~P~r~~Y~G~VfR~e~~~-----~~~~ef~Q~GvEiiG~~~~~-aDa-EvI~la~~~L~~lgi~~~~ 882 (1196)
+|+++.. ...|+|+||+|+|||+|.++ .|.+||+|+|+|+||..+.. +++ |+|.++.++++.||+.. +
T Consensus 97 ~~~~~~~~~s~~~LPlr~~~~g~vfR~E~~~~~~Gl~R~reF~q~e~~i~~~~e~~~~e~~e~l~~~~~~l~~lgl~~-~ 175 (298)
T cd00771 97 CLIFKSKPRSYRDLPLRLAEFGTVHRYEQSGALHGLTRVRGFTQDDAHIFCTPDQIKEEIKGVLDLIKEVYSDFGFFD-Y 175 (298)
T ss_pred HHHHHhhccchhhCCeEEEEecCcccCCCCCCCCCccccccEEECCEEEEeCCcchHHHHHHHHHHHHHHHHHcCCCc-E
Confidence 9988863 24699999999999998775 35668999999999887653 343 79999999999999986 9
Q ss_pred EEEeCcHH
Q 000993 883 DIHLNHGD 890 (1196)
Q Consensus 883 ~i~Lg~~~ 890 (1196)
.|.+++++
T Consensus 176 ~i~l~~~~ 183 (298)
T cd00771 176 KVELSTRP 183 (298)
T ss_pred EEEEEcCh
Confidence 99999986
|
ThrRS is a homodimer. It is responsible for the attachment of threonine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain. |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.1e-18 Score=189.17 Aligned_cols=179 Identities=13% Similarity=0.152 Sum_probs=130.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchh-HHH------HHHHHHHHHhcCCCCeeeeeeeeeec
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV-NDR------ILREVATLSRLQHQHVVRYYQAWFET 452 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~-~~~------~~~Ev~iL~~L~HpnIV~l~~~~~e~ 452 (1196)
-++|++++.||.|+||.||++.. ++..+|||+++......+. ... +.+|+..+.++.||+|..+...+...
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 36899999999999999999655 4778999999754432221 122 57899999999999999988776432
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~g 531 (1196)
... ........+++|||++| +|.++.. +++ ....+|+.+
T Consensus 108 ~~~--------------------------------~~~~~~~~~lvmEyi~G~tL~~~~~----~~~----~~~~~i~~~ 147 (232)
T PRK10359 108 ERK--------------------------------TLRYAHTYIMLIEYIEGVELNDMPE----ISE----DVKAKIKAS 147 (232)
T ss_pred ccc--------------------------------cccccCCeEEEEEEECCccHHHhhh----ccH----HHHHHHHHH
Confidence 100 00112456899999987 7877632 333 245699999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
|..||+.|++|||+||+||+++.++ ++|+|||..+...... ....++.. ..
T Consensus 148 l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~---------------------------a~d~~vle-r~ 198 (232)
T PRK10359 148 IESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRK---------------------------AKDRIDLE-RH 198 (232)
T ss_pred HHHHHHcCCccCCCChHHEEEeCCC-EEEEECCCcccccchh---------------------------hHHHHHHH-hH
Confidence 9999999999999999999999988 9999999886432110 00012333 35
Q ss_pred CCCcchhHHHHHHHHHhh
Q 000993 612 IDEKADMYSLGIVFFELW 629 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELl 629 (1196)
|+.++|+||||+++.-+.
T Consensus 199 y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 199 YGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred hcccccccceeEeehHHH
Confidence 778999999999876653
|
|
| >cd00779 ProRS_core_prok Prolyl-tRNA synthetase (ProRS) class II core catalytic domain | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.1e-19 Score=197.95 Aligned_cols=159 Identities=11% Similarity=0.086 Sum_probs=133.2
Q ss_pred cccccccccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecC--CCcccccceEEEeecCCceE
Q 000993 730 HHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG--DCPQFKRNTVKLLTHGGDLL 803 (1196)
Q Consensus 730 ~~~~~l~~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~--~~~~~~~~my~f~D~~G~~l 803 (1196)
..++.. ...++|+.|++|.++.+++.|++.+++.|+++||++|.||.| ++.. +.+...++||+|.|.+|+.+
T Consensus 11 ~~ag~~--~~~~~G~~~~lP~g~~l~~~i~~~~~~~~~~~G~~ei~~P~l~~~~~~~~sg~~~~~~~emy~~~d~~~~~l 88 (255)
T cd00779 11 LRAGFI--RQTSSGLYSWLPLGLRVLKKIENIIREEMNKIGAQEILMPILQPAELWKESGRWDAYGPELLRLKDRHGKEF 88 (255)
T ss_pred HHcCCc--ccCCCceEEECchHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHHhcCCccccCcccEEEecCCCCeE
Confidence 344444 346899999999999999999999999999999999999999 3332 34467899999999999999
Q ss_pred eecCC----CcHHHHHHHHhCCCCceeEEEecCeeecC-CCCCC---CcceeEeEEEEeCCCCccchH---HHHHHHHHH
Q 000993 804 ELSHE----LRLPFIRWAISNQKSSFKRYEISSVYRRA-IGHSP---PNRYLQGDFDIIGGASALTEA---EVLKVTMDI 872 (1196)
Q Consensus 804 aLRPD----~T~~iaR~~a~~~~~P~r~~Y~G~VfR~e-~~~~~---~~ef~Q~GvEiiG~~~~~aDa---EvI~la~~~ 872 (1196)
+|||+ +|..++|.+.+++..|+|+||+|+|||+| +++.| .+||+|+|+++||.+...+|+ |++.++.++
T Consensus 89 ~LrPt~e~~~t~~~~~~i~s~~~LPlr~~~~~~~FR~E~~~~~Gl~R~reF~q~e~~~~~~~~~~a~~~~~~i~~~~~~i 168 (255)
T cd00779 89 LLGPTHEEVITDLVANEIKSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFLMKDAYSFDIDEESLEETYEKMYQAYSRI 168 (255)
T ss_pred EEecCCcHHHHHHHHhccccHhhCCHHHHhCcceecCCCCCCCceeeeeeEeHhhheeccCCHHHHHHHHHHHHHHHHHH
Confidence 99999 55555566555556799999999999999 88765 456999999999998888898 888899999
Q ss_pred HHHcCCCCceEEEeCcHHHH
Q 000993 873 VTRFFHAESCDIHLNHGDLL 892 (1196)
Q Consensus 873 L~~lgi~~~~~i~Lg~~~i~ 892 (1196)
|+.||+. +.+..++.+.+
T Consensus 169 l~~Lgl~--~~~~~~~~~~~ 186 (255)
T cd00779 169 FKRLGLP--FVKVEADSGAI 186 (255)
T ss_pred HHHcCCc--EEEEEecCCCC
Confidence 9999994 88887776544
|
ProRS is a homodimer. It is responsible for the attachment of proline to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain. This subfamily contains the core domain of ProRS from prokaryotes and from the mitochondria of eukaryotes. |
| >KOG1637 consensus Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.4e-17 Score=185.21 Aligned_cols=356 Identities=15% Similarity=0.122 Sum_probs=239.1
Q ss_pred cccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce------eecCCCcccccceEEEeecCCceEeecCCC
Q 000993 736 RLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHEL 809 (1196)
Q Consensus 736 ~~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~laLRPD~ 809 (1196)
...+...|+-.++|..+++.+.+.+.++.-|+..||+||.||.+ .-+++++.+.++||+|.- ..++.+|.|.-
T Consensus 176 ff~~lSPGS~FflP~G~~iyN~Lv~fir~ey~~rGf~EVitPniy~~~LWe~SGHwqnY~enmF~~e~-eke~~~LKPMN 254 (560)
T KOG1637|consen 176 FFHELSPGSCFFLPHGTRIYNTLVDFIRAEYRKRGFTEVITPNIYNKKLWETSGHWQNYSENMFKFEV-EKEEFALKPMN 254 (560)
T ss_pred eeccCCCcceeeccCcchHHHHHHHHHHHHHHhcCCceecCcchhhhhhhhhccchhhhhhhceeeee-chhhhccCccC
Confidence 34577889999999999999999999999999999999999999 556778999999999965 45679999955
Q ss_pred cHHHHHHHHhC----CCCceeEEEecCeeecCCCC-----CCCcceeEeEEEEeCCCCccch-H-HHHHHHHHHHHHcCC
Q 000993 810 RLPFIRWAISN----QKSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGASALTE-A-EVLKVTMDIVTRFFH 878 (1196)
Q Consensus 810 T~~iaR~~a~~----~~~P~r~~Y~G~VfR~e~~~-----~~~~ef~Q~GvEiiG~~~~~aD-a-EvI~la~~~L~~lgi 878 (1196)
++.-.=+...+ +..|+|+.-+|.++|+|-.+ .+.|+|+|.+++||+..++.-| . -++..+.-++.-+|.
T Consensus 255 CPgHcLmf~~r~rS~reLPlR~aDFg~LHRnE~SGaLsGLTRvRrFqQDDaHIFCt~~Qi~~Eik~~l~fl~~vY~~fgf 334 (560)
T KOG1637|consen 255 CPGHCLMFAHRDRSYRELPLRFADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTPDQVKEEIKGCLDFLDYVYGVFGF 334 (560)
T ss_pred CCccccccccCCccHhhCCccccCcceeeeccccccccccceeeeecccCceEEecCccHHHHHHHHHHHHHHHHHhccc
Confidence 55443333332 24599999999999998754 4667899999999999987543 3 567777777777776
Q ss_pred CCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHh
Q 000993 879 AESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRF 958 (1196)
Q Consensus 879 ~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~ 958 (1196)
. +.+.|+.+.- +.+|.-+.|-++-..+-. ++.+.|-+-.....=.+|
T Consensus 335 ~--f~l~lSTRPe-----~~lG~l~~Wd~AE~~L~~----------------------al~e~g~pw~lN~GDGAF---- 381 (560)
T KOG1637|consen 335 T--FKLNLSTRPE-----KFLGDLETWDEAEFKLEE----------------------ALNESGEPWVLNPGDGAF---- 381 (560)
T ss_pred c--ceeEeccChH-----HhccCHHHHHHHHHHHHH----------------------HHHHhCCCceecCCCccc----
Confidence 4 8999999753 244544433322221111 111111110000001112
Q ss_pred cCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcccccccccccccc
Q 000993 959 CGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGG 1038 (1196)
Q Consensus 959 ~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GG 1038 (1196)
.|+..++ .+.+++.+- ... ..|++|+-+.-.++- -|+. . -|
T Consensus 382 YGPKIDi------------~l~Dal~r~----hQc-aTIQLDFqLP~rFdL----~y~~---~---------------~g 422 (560)
T KOG1637|consen 382 YGPKIDI------------TLDDALGRK----HQC-ATIQLDFQLPIRFDL----EYET---E---------------DG 422 (560)
T ss_pred ccceeee------------EhhhhcCcc----cce-eeeeecccChhhcCc----eeec---c---------------cc
Confidence 2321110 000000000 000 134445444322221 0000 0 00
Q ss_pred ccchhhhhccccccccccCCCCCCCcceecc-c-HHHHHhhccCCCCCC--CCCCCceEEEEEcCCCchHHHHHHHHHHH
Q 000993 1039 RYDYLLHRMWDREYVGYASRTNPPSGVGASL-A-LETIIQHYPVDFKPV--RNEAGTSVLVCSRGGGGLLVERMELVAEL 1114 (1196)
Q Consensus 1039 RYD~L~~~fg~~~~~~~~g~~~~~pAvGfai-g-lerl~~~L~~~~~~~--~~~~~~~vlv~~~~~~~~~~~a~~~a~~L 1114 (1196)
- .++++ -|.-|| | ++|.+++|.++.... .-..|-++.||+++ +....+|-++..+|
T Consensus 423 ~------------------~erPV-mIHRAIlGSvERmiaiL~E~~~gkwPFWlSPRq~~vIpVs-e~~~~ya~~V~~ql 482 (560)
T KOG1637|consen 423 D------------------LERPV-MIHRAILGSVERMIAILLESYGGKWPFWLSPRQAVVIPVS-EGPLDYATSVQKQL 482 (560)
T ss_pred c------------------ccchh-hHHHHHhhhHHHHHHHHHHHhCCCCCeeeccceEEEEECC-CcchhHHHHHHHHH
Confidence 0 01111 233333 3 899999998543333 33567889999997 78889999999999
Q ss_pred HHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEc---CCCcccccchHHHHHHHHHHH
Q 000993 1115 WEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHL---DVKKEKEVQRESLVRFLLDAI 1185 (1196)
Q Consensus 1115 r~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l---~~g~q~~v~~~el~~~l~~~l 1185 (1196)
+..|+-+++... +..+.+.++.|.-.++.++++||++|.+.++|.|+.+ +++.+..++++++++.+++.-
T Consensus 483 ~~a~f~~Dld~t-~~tl~kkir~Aqla~yn~i~VVGdkE~~~~~vnVr~Rd~~~~~~~~~~tie~~~~~~~~l~ 555 (560)
T KOG1637|consen 483 EEAGFYVDLDPT-DSTLRKKIRNAQLAHYNFIFVVGDKEVETGRVNVRTRDNRDNKTESEMTIEELSDEFKELK 555 (560)
T ss_pred HhhhceeecCCc-cchHHHHHhhhhhcceeEEEEEchhhhhcCceeeeccccccccccceeeHHHHHHHHHHhH
Confidence 999999998777 4789999999999999999999999999999999997 555567888999988877653
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.2e-18 Score=190.00 Aligned_cols=247 Identities=19% Similarity=0.265 Sum_probs=149.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCC-----------CCeeeeeeee
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQH-----------QHVVRYYQAW 449 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~H-----------pnIV~l~~~~ 449 (1196)
.+...+.||.|+++.||.+++..||+.+|+|++...... ....+++.+|.-....+.+ .-++++--.-
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 456788999999999999999999999999998765532 3345677777755555433 1122211111
Q ss_pred eecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHh---hcCCCC----HHHHH
Q 000993 450 FETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE---SYDHFD----KELAW 522 (1196)
Q Consensus 450 ~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~---~~~~l~----e~~~~ 522 (1196)
+... ..............-.+.+++|.-+.++|.+++. ...... .....
T Consensus 93 i~~~------------------------~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl 148 (288)
T PF14531_consen 93 IPGK------------------------PPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARL 148 (288)
T ss_dssp ETTS-------------------------SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHH
T ss_pred EcCC------------------------CcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHH
Confidence 0000 0000000000000112567888888888888764 222221 12224
Q ss_pred HHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCC
Q 000993 523 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 602 (1196)
Q Consensus 523 ~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 602 (1196)
.+..|+++.+++||+.|++|+||||+|++++.+|.+.|+||+.....+... .....+..|.|
T Consensus 149 ~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~------------------~~~~~~~~~~P 210 (288)
T PF14531_consen 149 SLTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRY------------------RCSEFPVAFTP 210 (288)
T ss_dssp HHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEE------------------EGGGS-TTTS-
T ss_pred HHHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHHeecCcee------------------eccCCCcccCC
Confidence 455899999999999999999999999999999999999999876543211 00234578999
Q ss_pred chhccCC-------CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccC
Q 000993 603 PEIEQGW-------PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 672 (1196)
Q Consensus 603 PE~l~~~-------~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~ 672 (1196)
||..... -.++.+.|.|+||+++|.||+ ||.............. ...+.+...+.||+.+|+.
T Consensus 211 Pe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~~f~-------~C~~~Pe~v~~LI~~lL~~ 283 (288)
T PF14531_consen 211 PELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEWDFS-------RCRDMPEPVQFLIRGLLQR 283 (288)
T ss_dssp HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGGGGT-------TSS---HHHHHHHHHHT-S
T ss_pred hhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccccch-------hcCCcCHHHHHHHHHHccC
Confidence 9976431 237889999999999999997 8764432211100111 1123445789999999999
Q ss_pred CCCCC
Q 000993 673 SPSDR 677 (1196)
Q Consensus 673 dP~~R 677 (1196)
||.+|
T Consensus 284 ~~~~R 288 (288)
T PF14531_consen 284 NPEDR 288 (288)
T ss_dssp SGGGS
T ss_pred CcccC
Confidence 99988
|
|
| >TIGR00389 glyS_dimeric glycyl-tRNA synthetase, dimeric type | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.5e-17 Score=199.17 Aligned_cols=121 Identities=17% Similarity=0.169 Sum_probs=99.5
Q ss_pred CCcc-eecccHHHHHhhccC-CCC-------------CCCCCCCceEEEEEcCCC-chHHHHHHHHHHHHHcCCeEEEee
Q 000993 1062 PSGV-GASLALETIIQHYPV-DFK-------------PVRNEAGTSVLVCSRGGG-GLLVERMELVAELWEENIKAQFVP 1125 (1196)
Q Consensus 1062 ~pAv-Gfaiglerl~~~L~~-~~~-------------~~~~~~~~~vlv~~~~~~-~~~~~a~~~a~~Lr~~Gi~vel~~ 1125 (1196)
+|.| --|+|+|||+.+|.+ ... .+...++.+|+|++...+ +....|.++++.||+.|++|+++.
T Consensus 414 ~P~VIepS~GIdRIi~ALle~~~~e~~~~~~~r~vL~lp~~lAP~kV~VIpl~~~~el~~~A~eIa~~LR~~GI~VeiD~ 493 (551)
T TIGR00389 414 IPHVIEPSFGIDRIIYALLEHSYQEEVLDGEEREVLRLPPHLAPIKVAVLPLVNKEELKEIAKEIFQALRKTGIRIKYDD 493 (551)
T ss_pred cceEEEcccCHHHHHHHHHHhhCccccccccccceeccCCccCCceEEEEEecCcHHHHHHHHHHHHHHHHCCCEEEEEC
Confidence 5654 788999999876642 111 011126889999998521 267889999999999999999877
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHH
Q 000993 1126 VPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDA 1184 (1196)
Q Consensus 1126 ~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~ 1184 (1196)
. . ++++++++|++.|+|++|+||++|+++|+|+||++++++|..++++++.+.+.+.
T Consensus 494 s-~-sIGKq~rrADeiGiPf~IIIG~~EledgtVTIRdRdT~eQ~~I~ldeL~~~L~e~ 550 (551)
T TIGR00389 494 S-G-TIGKRYRRADEIGTPFCVTIDFETLEDETVTIRERDSMKQVRVKIKELPSYIKKL 550 (551)
T ss_pred C-C-CHHHHHHHHHHcCCCEEEEECCchhhCCEEEEEECCCCceEEeeHHHHHHHHHhh
Confidence 5 4 5999999999999999999999999999999999999999999999998887653
|
This model describes a glycyl-tRNA synthetase distinct from the two alpha and two beta chains of the tetrameric E. coli glycyl-tRNA synthetase. This enzyme is a homodimeric class II tRNA synthetase and is recognized by pfam model tRNA-synt_2b, which recognizes His, Ser, Pro, and this set of glycyl-tRNA synthetases. |
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.1e-17 Score=174.96 Aligned_cols=137 Identities=20% Similarity=0.275 Sum_probs=105.3
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-----CCCCeeeeeeeeeecCccccCC
Q 000993 385 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-----QHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 385 ~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-----~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
-.+.||+|+||.||. +..++.. +||++..... ...+.+.+|+.+++.+ +||||+++++++...
T Consensus 6 ~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~--~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~------- 73 (210)
T PRK10345 6 EQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD--GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETD------- 73 (210)
T ss_pred CcceecCCCceEEEE--CCCCcCe-EEEEEecccc--chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeC-------
Confidence 347899999999995 7767666 6998875432 2346789999999999 679999999987331
Q ss_pred CCcCCCCcccccccccccccccccccccccccccE-EEEEeeecC---CCHHHHHhhcCCCCHHHHHHHHHHHHHHH-HH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTY-LYIQMEYCP---RTLRQVFESYDHFDKELAWHLFRQIVEGL-AH 534 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~iVmEy~~---gsL~~~l~~~~~l~e~~~~~i~~qIa~gL-~y 534 (1196)
..... +.+||||++ ++|.+++.+. .+++. ..++.|++.++ +|
T Consensus 74 ------------------------------~g~g~v~~~I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~y 120 (210)
T PRK10345 74 ------------------------------CGTGYVYDVIADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRY 120 (210)
T ss_pred ------------------------------CCCeEEEEEEecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHH
Confidence 01123 347899954 5999999663 56666 35678888888 99
Q ss_pred HHhCCCcccCCCcCcEEecC----CCCeEEeccCcc
Q 000993 535 IHGQGIIHRDLTPNNIFFDA----RNDIKIGDFGLA 566 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~----~~~vKL~DFGlA 566 (1196)
||+++|+||||||+|||++. ++.++|+||+-+
T Consensus 121 Lh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 121 LLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred HHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 99999999999999999974 347999994444
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.4e-16 Score=167.72 Aligned_cols=191 Identities=15% Similarity=0.119 Sum_probs=131.4
Q ss_pred eEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCch--hHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCccccCCC
Q 000993 384 EELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP--VNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 384 ~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~--~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.+...|++|+||+||.+.. .+..++.+.+........ ....+.+|+++|++|+ |++|+++++..
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~----------- 71 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD----------- 71 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc-----------
Confidence 3457899999999997765 578888776653322111 1125789999999995 57888887531
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
..|++|+|+.| +|.+.+.. . ...++.|++.+|.++|++|
T Consensus 72 ---------------------------------~~~lvmeyI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~G 111 (218)
T PRK12274 72 ---------------------------------GRHLDRSYLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCG 111 (218)
T ss_pred ---------------------------------CEEEEEeeecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCc
Confidence 24899999977 66544321 1 2357889999999999999
Q ss_pred CcccCC-CcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCcc-ccCcCccccccCCCchhccCCCCCC-Ccc
Q 000993 540 IIHRDL-TPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVS-VDGTGQVGTYFYTAPEIEQGWPKID-EKA 616 (1196)
Q Consensus 540 IiHrDL-Kp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~s-~ks 616 (1196)
|+|||| ||+|||++.++.++|+|||+|............ + ...+.. ....-..+++.|++|+.-.-....+ ...
T Consensus 112 IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~-L--~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~ 188 (218)
T PRK12274 112 VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRL-L--AREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRE 188 (218)
T ss_pred CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHH-H--HHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHH
Confidence 999999 799999999999999999999853321100000 0 000000 0001124788999998644322233 678
Q ss_pred hhHHHHHHHHHhhc
Q 000993 617 DMYSLGIVFFELWH 630 (1196)
Q Consensus 617 DVwSlGviLyELlt 630 (1196)
++++-|+-+|.++|
T Consensus 189 ~w~~~g~~~~~~~~ 202 (218)
T PRK12274 189 LWFATGKPVYRFVT 202 (218)
T ss_pred HHHHhcchHHHHHh
Confidence 99999999999997
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1e-16 Score=189.40 Aligned_cols=236 Identities=25% Similarity=0.423 Sum_probs=170.3
Q ss_pred HHhcCCCCeeeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh
Q 000993 434 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES 512 (1196)
Q Consensus 434 L~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~ 512 (1196)
|+.+.|.|+.+++|.++. ...+++|.+||. |+|.+.+..
T Consensus 1 l~~l~h~n~~~f~g~~~~----------------------------------------~~~~~~i~~~c~rGsl~D~i~~ 40 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVD----------------------------------------GPEMIVIWEYCSRGSLLDILSN 40 (484)
T ss_pred CcccchhhhhhheeeEec----------------------------------------CCceEEEEeeecCccHHhHHhc
Confidence 467899999999999853 256789999997 799999976
Q ss_pred -cCCCCHHHHHHHHHHHHHHHHHHHhCCC-cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCcccc
Q 000993 513 -YDHFDKELAWHLFRQIVEGLAHIHGQGI-IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 590 (1196)
Q Consensus 513 -~~~l~e~~~~~i~~qIa~gL~yLHs~gI-iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~ 590 (1196)
...++.-....++++|+.||+|||...| .|+.|++.|++++....+||+|||+........ . ...
T Consensus 41 ~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~-~------------~~~ 107 (484)
T KOG1023|consen 41 EDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETA-E------------PEA 107 (484)
T ss_pred cccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeeeEEEEechhhhcccccccc-c------------ccc
Confidence 4568888899999999999999999876 999999999999999999999999988653200 0 001
Q ss_pred CcCccccccCCCchhccCCC------CCCCcchhHHHHHHHHHhhc---CCchh----HHHHHHHHHhh-hc-CCCCCcc
Q 000993 591 GTGQVGTYFYTAPEIEQGWP------KIDEKADMYSLGIVFFELWH---PFSTA----MERQIVLSDLK-QK-GELPPSW 655 (1196)
Q Consensus 591 ~~~~~GT~~Y~APE~l~~~~------~~s~ksDVwSlGviLyELlt---Pf~~~----~~~~~~~~~l~-~~-~~~p~~~ 655 (1196)
.....-...|.|||.+.+.. ..+.++|+||||++++|+++ ||... ...++...... .. ...|..+
T Consensus 108 ~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~ 187 (484)
T KOG1023|consen 108 HHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIE 187 (484)
T ss_pred cchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchh
Confidence 12223456799999987631 14678999999999999995 77642 22334333222 11 1123222
Q ss_pred c--cCCHHHHHHHHHcccCCCCCCCCHHHHHhcc--CCCC--chHHHHHHHHHhcCCCCCCcchhhhccccccchhhhh
Q 000993 656 V--AKFSEQESLLRRLMSPSPSDRPSATELLQDA--LPPQ--MEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDM 728 (1196)
Q Consensus 656 ~--~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~--~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~e~~~~~ 728 (1196)
. ...+++..+++.||..+|.+||+++++-... .... .+..+++.++++++ .|...++..++|++..+
T Consensus 188 ~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~~~~~nl~D~m~~~le------~Y~~nLe~~v~eRt~~l 260 (484)
T KOG1023|consen 188 LLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGGSSKGNLMDSLFRMLE------SYADNLEKLVDERTAEL 260 (484)
T ss_pred hhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccccccchhHHHHHHHHH------HHHhhhHHHHHHHHHHH
Confidence 1 3344688999999999999999999985532 2222 23477788887774 37777777777755443
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.1e-16 Score=176.74 Aligned_cols=143 Identities=20% Similarity=0.150 Sum_probs=110.5
Q ss_pred CceEEeeeccCCcEEEEEEE-EccCCcEEEEEEEecCCCCc----------------------hhHHHHHHHHHHHHhcC
Q 000993 382 DFEELQPLGHGGFGHVVLCK-NKLDGRHYAVKKIRLKDKSL----------------------PVNDRILREVATLSRLQ 438 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~-~~~~g~~vAVK~i~~~~~~~----------------------~~~~~~~~Ev~iL~~L~ 438 (1196)
.|.+.+.||+|+||.||+|. +..+|+.||||+++...... .....+.+|+..++.+.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46778899999999999999 66799999999997543110 01124568999999997
Q ss_pred CCC--eeeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCC
Q 000993 439 HQH--VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDH 515 (1196)
Q Consensus 439 Hpn--IV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~ 515 (1196)
+.+ +.+++.. ...|+||||++| +|.........
T Consensus 109 ~~~i~~p~~~~~--------------------------------------------~~~~lV~E~~~g~~L~~~~~~~~~ 144 (237)
T smart00090 109 EAGVPVPKPIAW--------------------------------------------RRNVLVMEFIGGDGLPAPRLKDVE 144 (237)
T ss_pred hcCCCCCeeeEe--------------------------------------------cCceEEEEEecCCcccccccccCC
Confidence 633 2233211 113799999987 56555434455
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-CcccCCCcCcEEecCCCCeEEeccCcchhc
Q 000993 516 FDKELAWHLFRQIVEGLAHIHGQG-IIHRDLTPNNIFFDARNDIKIGDFGLAKFL 569 (1196)
Q Consensus 516 l~e~~~~~i~~qIa~gL~yLHs~g-IiHrDLKp~NILld~~~~vKL~DFGlA~~~ 569 (1196)
+....+..++.||+.+|++||++| |+||||||+||+++ ++.++|+|||.|...
T Consensus 145 ~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 145 PEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence 677778899999999999999999 99999999999999 889999999998753
|
|
| >cd00772 ProRS_core Prolyl-tRNA synthetase (ProRS) class II core catalytic domain | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-15 Score=171.04 Aligned_cols=148 Identities=14% Similarity=0.145 Sum_probs=124.1
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCCCcc---cccceEEEeecCC----ceEeecCC
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQ---FKRNTVKLLTHGG----DLLELSHE 808 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~---~~~~my~f~D~~G----~~laLRPD 808 (1196)
.++|+.+++|.+..+++.|++.+++.++++||++|.||.| ++.+.|.. ..++||.+.|.+| +.++|||+
T Consensus 20 ~~~G~~~~lP~g~~i~~~I~~~i~~~~~~~G~~ev~~P~l~~~~~~~~~g~~~~~~~~e~~~~~~~~~~~~~~~l~LrPt 99 (264)
T cd00772 20 PGRGIINFLPLAKAILDKIENVLDKMFKEHGAQNALFPFFILASFLEKEAEHDEGFSKELAVFKDAGDEELEEDFALRPT 99 (264)
T ss_pred CCCCEEEECCcHHHHHHHHHHHHHHHHHHcCCeEEECCeeccHHHHhhcCCcccccCccceEEEeCCCCccCceEEECCC
Confidence 4789999999999999999999999999999999999999 33322332 3478999999887 89999999
Q ss_pred CcHHHHHHHHhC----CCCceeEEEecCeeecC-CCCC---CCcceeEeEEEEeCCCCccchHHHHHHH---HHHHHHcC
Q 000993 809 LRLPFIRWAISN----QKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASALTEAEVLKVT---MDIVTRFF 877 (1196)
Q Consensus 809 ~T~~iaR~~a~~----~~~P~r~~Y~G~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~~aDaEvI~la---~~~L~~lg 877 (1196)
.|++++++++.. +..|+|+||+|+|||+| +++. |.+||+|.++++|+.....+|.|+..+. .++++.||
T Consensus 100 ~e~~~~~~~~~~i~s~~~LPlrl~~~~~~fR~E~r~~~Gl~R~reF~~~e~~~~~~~~e~a~~e~~~~~~~~~~i~~~l~ 179 (264)
T cd00772 100 LEENIGEIAAKFIKSWKDLPQHLNQIGNKFRDEIRPRFGFLRAREFIMKDGHSAHADAEEADEEFLNMLSAYAEIARDLA 179 (264)
T ss_pred CCHHHHHHHHhhhhhhhccCeeEEEEeCeEeCcCCCCCCcceeeEEEEeeeEEecCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999988763 35699999999999998 7754 4557999999999988878888776655 99999999
Q ss_pred -CCCceEEEeCcH
Q 000993 878 -HAESCDIHLNHG 889 (1196)
Q Consensus 878 -i~~~~~i~Lg~~ 889 (1196)
+. +.+.....
T Consensus 180 ~lp--~~~~~~~~ 190 (264)
T cd00772 180 AID--FIEGEADE 190 (264)
T ss_pred Ccc--EEEEEcCC
Confidence 63 77766653
|
ProRS is a homodimer. It is responsible for the attachment of proline to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain. |
| >COG0423 GRS1 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.6e-15 Score=173.43 Aligned_cols=127 Identities=17% Similarity=0.162 Sum_probs=103.7
Q ss_pred CCCCcc-eecccHHHHHhhcc------CCC-------CCCCCCCCceEEEEEcCC-CchHHHHHHHHHHHHHcCCeEEEe
Q 000993 1060 NPPSGV-GASLALETIIQHYP------VDF-------KPVRNEAGTSVLVCSRGG-GGLLVERMELVAELWEENIKAQFV 1124 (1196)
Q Consensus 1060 ~~~pAv-Gfaiglerl~~~L~------~~~-------~~~~~~~~~~vlv~~~~~-~~~~~~a~~~a~~Lr~~Gi~vel~ 1124 (1196)
+-+|.| --|+|+||++-++. +.. ..+...+|+++.|+++-. ++....|.++.+.||+.|+.|..+
T Consensus 413 ~~iP~VIEPSfGidRi~y~~l~~ay~~ee~~e~R~vLrl~p~lAPikvaVlPL~~k~~l~~~a~~i~~~L~~~~~~v~yD 492 (558)
T COG0423 413 KYIPHVIEPSFGIDRIFYALLEHAYTEEEVEEKRIVLRLPPDLAPIKVAVLPLVKKDELVEIAKEIFEKLRELGFNVDYD 492 (558)
T ss_pred eecCceeccCCCchHHHHHHHHHhhcccccccceeEEecCcccCceEEEEEeeecccchhHHHHHHHHHHHhcCceEEec
Confidence 346766 88999999965542 111 011235788888888742 247788999999999999999844
Q ss_pred eCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHhh
Q 000993 1125 PVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1188 (1196)
Q Consensus 1125 ~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~~ 1188 (1196)
. ..++++.++.+++.|.||+|.+.-+.+++++||||++++-+|+.++++++..+|.+.+...
T Consensus 493 d--sGsIGrRYrR~DEIGtPfcVTvD~eTleD~tVTiReRDs~~QvRv~i~el~~~l~~~~~~~ 554 (558)
T COG0423 493 D--SGSIGRRYRRQDEIGTPFCVTVDFETLEDNTVTIRERDSMEQVRVKIEELADYLRELIKGG 554 (558)
T ss_pred C--CCcHhhhhhhccccCCceEEEecCCcccCCcEEEeecCchheeeeeHHHHHHHHHHHhccc
Confidence 3 3599999999999999999999999999999999999999999999999999999987744
|
|
| >PLN02734 glycyl-tRNA synthetase | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.3e-15 Score=182.79 Aligned_cols=122 Identities=19% Similarity=0.143 Sum_probs=99.4
Q ss_pred CCCCcc-eecccHHHHHhhccC-CC------------CCCCCCCCceEEEEEcCCC-chHHHHHHHHHHHHHcCCeEEEe
Q 000993 1060 NPPSGV-GASLALETIIQHYPV-DF------------KPVRNEAGTSVLVCSRGGG-GLLVERMELVAELWEENIKAQFV 1124 (1196)
Q Consensus 1060 ~~~pAv-Gfaiglerl~~~L~~-~~------------~~~~~~~~~~vlv~~~~~~-~~~~~a~~~a~~Lr~~Gi~vel~ 1124 (1196)
.-+|.| --|+|++||+.++.+ .. ..+...+|.+|.|++...+ .....|.++++.||+.|++|+++
T Consensus 526 ~~iP~VIEPS~GIgRIl~AilE~s~~~~~~De~R~~L~~Pp~IAP~qVaIlPL~~~ee~~~~A~eLa~~LR~~GIrVelD 605 (684)
T PLN02734 526 VFTPSVIEPSFGIGRIIYCLFEHSFYTRPGDEQLNVFRFPPLVAPIKCTVFPLVQNQQLNAVAKVISKELTAAGISHKID 605 (684)
T ss_pred eecCceEecCccHHHHHHHHHHHHhccccCCCcceEEecCcccCCcEEEEEEecCChHHHHHHHHHHHHHHhCCCEEEEE
Confidence 346766 889999999776541 11 1122356777777766422 35788999999999999999987
Q ss_pred eCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 000993 1125 PVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1186 (1196)
Q Consensus 1125 ~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~ 1186 (1196)
.. +.++++++++|++.|+|++|+||. +|+|+||++++++|..++++++++.+.+.++
T Consensus 606 d~-~~SIGKRyrrADeiGIPf~ItIG~----dgtVTIRdRdsgeQ~rV~ldeLv~~I~~li~ 662 (684)
T PLN02734 606 IT-GTSIGKRYARTDELGVPFAVTVDS----DGSVTIRERDSKDQVRVPVEEVASVVKDLTD 662 (684)
T ss_pred CC-CCCHhHHHHHHHHcCCCEEEEECC----CCeEEEEECCCCceEEeeHHHHHHHHHHHHc
Confidence 66 669999999999999999999997 7999999999999999999999999988875
|
|
| >cd00774 GlyRS-like_core Glycyl-tRNA synthetase (GlyRS)-like class II core catalytic domain | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.2e-15 Score=170.22 Aligned_cols=140 Identities=14% Similarity=0.147 Sum_probs=117.2
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcC--CccccccceeecCCCcccccceEEEe----ecCCceEeecCCCc---
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHC--AKHLEIEPMYLLGDCPQFKRNTVKLL----THGGDLLELSHELR--- 810 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~G--y~~I~tP~~~~~~~~~~~~~~my~f~----D~~G~~laLRPD~T--- 810 (1196)
.++|+.||+|.++.+++.|++.+++.|.++| |.+|.||++... +||++. |.+++.++||||+|
T Consensus 20 ~~~G~~d~~P~g~~l~~~i~~~~~~~~~~~g~~~~~i~tP~i~~~--------~mf~~~~g~~d~~~~~~~Lrp~~~~~~ 91 (254)
T cd00774 20 GVAGFYDYGPLGVELKNNIKSAWRKSFVLEEEDMLEIDSPIITPE--------LMFKTSIGPVESGGNLGYLRPETAQGI 91 (254)
T ss_pred ChhcccccCchHHHHHHHHHHHHHHHHHhcCCCeEEEeccccCCH--------HHheeeecccCCCCcccccCCcccchH
Confidence 4789999999999999999999999999996 999999998433 677775 45678999999999
Q ss_pred -HHHHHHHHhCC-CCceeEEEecCeeecCCCC----CCCcceeEeEEEEeCCCCccch--HHHHHHHHHHHHHcCCCC-c
Q 000993 811 -LPFIRWAISNQ-KSSFKRYEISSVYRRAIGH----SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAE-S 881 (1196)
Q Consensus 811 -~~iaR~~a~~~-~~P~r~~Y~G~VfR~e~~~----~~~~ef~Q~GvEiiG~~~~~aD--aEvI~la~~~L~~lgi~~-~ 881 (1196)
++++|.+..+. ..|+|+||+|+|||+|.++ .|.|||+|+|+|+||.++...+ ..++.+..+++..+|+.. .
T Consensus 92 ~~~~~~~~~~~~~~lP~~~~qig~~fR~E~~~~~gl~R~ReF~q~d~~~f~~~~~~~e~~~~v~~~~~~~l~~~G~~~~~ 171 (254)
T cd00774 92 FVNFKNLLEFNRRKLPFGVAQIGKSFRNEISPRNGLFRVREFTQAEIEFFVDPEKSHPWFDYWADQRLKWLPKFAQSPEN 171 (254)
T ss_pred HHHHHHHHHHhCCCCCchhhhhchhhccccCcccceeeeccchhhheeeeECCCCchHHHHHHHHHHHHHHHHcCCCccc
Confidence 79999887764 7899999999999998755 4667899999999998775433 378999999999999863 2
Q ss_pred eEEEeC
Q 000993 882 CDIHLN 887 (1196)
Q Consensus 882 ~~i~Lg 887 (1196)
+.+...
T Consensus 172 ~r~~~~ 177 (254)
T cd00774 172 LRLTDH 177 (254)
T ss_pred eEEEec
Confidence 344433
|
GlyRS functions as a homodimer in eukaryotes, archaea and some bacteria and as a heterotetramer in the remainder of prokaryotes. It is responsible for the attachment of glycine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP binding and hydrolysis. This alignment contains only sequences from the GlyRS form which homodimerizes. The heterotetramer glyQ is in a different family of class II aaRS. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs. This domain is also found at the N-terminus of the accessory subunit of mitochondrial polymerase gamma (Pol gamma b). Pol gamma b stimulates processive DNA synthesis and is functional as a homodimer, which can associate with the catalytic subunit Pol gamma alpha to form a heterotrimer. Despite significant both structural and sequence similarity with Gly |
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.4e-15 Score=161.71 Aligned_cols=135 Identities=27% Similarity=0.342 Sum_probs=107.7
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCch------hHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP------VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~------~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
+.||+|++|.||+|.+ +|..+++|+......... ....+.+|+.++..+.|++|+....++..
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~--------- 70 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVD--------- 70 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEe---------
Confidence 5799999999999988 578899998654322111 12457889999999999988655444321
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
....+++|||++| +|.+++..... ....++.+++.+|.++|+.|
T Consensus 71 -------------------------------~~~~~lv~e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~ 115 (211)
T PRK14879 71 -------------------------------PENFIIVMEYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAG 115 (211)
T ss_pred -------------------------------CCCCEEEEEEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCC
Confidence 2245899999976 89888865432 77889999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchh
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKF 568 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~ 568 (1196)
++|||++|.|||++ ++.++|+|||.++.
T Consensus 116 i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 116 IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999999999 78999999999864
|
|
| >PRK14894 glycyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.7e-14 Score=166.10 Aligned_cols=96 Identities=19% Similarity=0.197 Sum_probs=85.7
Q ss_pred CCCceEEEEEcCCC--chHHHHHHHHHHHHHcCC-eEEEeeCCCCCHHHHHHHHHHCCCcEEEEE-------cCCcccCC
Q 000993 1088 EAGTSVLVCSRGGG--GLLVERMELVAELWEENI-KAQFVPVPDPSLTEQYEYASEHDIKCLVIL-------TDTGAQKG 1157 (1196)
Q Consensus 1088 ~~~~~vlv~~~~~~--~~~~~a~~~a~~Lr~~Gi-~vel~~~~~~~l~k~~~~A~~~g~~~~iii-------g~~E~~~g 1157 (1196)
.+|.+|.|+++.+. ....+|.++++.|++.|+ +|+++. +.+++++++.|+..|+||+|+| |++|.+++
T Consensus 432 LAPvQVaVLPLs~~~~~l~eyAkeI~~~L~~~Gi~rv~~Dd--sesIGKKyRraDeiGiPy~ITVD~~Tl~dGdkE~e~g 509 (539)
T PRK14894 432 LAPIKVAVFPLKRNHEGLVATAKAVRRQLQVGGRMRTVYDD--TGAIGKLYRRQDEIGTPFCITVDFDTIGQGKDPALAG 509 (539)
T ss_pred CCCceEEEEeccccccchHHHHHHHHHHHHHCCCceEEEcC--CCCHhHHHHhhhccCCCEEEEEeccccccccchhhcC
Confidence 46889999998621 234889999999999998 999765 3599999999999999999999 89999999
Q ss_pred eEEEEEcCCCcccccchHHHHHHHHHHH
Q 000993 1158 LVKVRHLDVKKEKEVQRESLVRFLLDAI 1185 (1196)
Q Consensus 1158 ~v~vk~l~~g~q~~v~~~el~~~l~~~l 1185 (1196)
+|+||++++++|..++++++++.|++++
T Consensus 510 TVTVR~RDs~eQ~rV~ideli~~L~~~~ 537 (539)
T PRK14894 510 TVTVRDRDTMAQERVPISELEAYLRDRV 537 (539)
T ss_pred eEEEEEeCCCeEEEEEHHHHHHHHHHHh
Confidence 9999999999999999999999998875
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.6e-15 Score=161.48 Aligned_cols=136 Identities=26% Similarity=0.226 Sum_probs=104.2
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCch--------------------hHHHHHHHHHHHHhcCCCCe
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP--------------------VNDRILREVATLSRLQHQHV 442 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~--------------------~~~~~~~Ev~iL~~L~HpnI 442 (1196)
|.+.+.||+|+||.||+|.+. +|+.||||+++....... ......+|..++..+.|+++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 556688999999999999886 899999999875431110 11235678888888888753
Q ss_pred --eeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHH
Q 000993 443 --VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKE 519 (1196)
Q Consensus 443 --V~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~ 519 (1196)
+..++ ....+++|||++| +|..+... .
T Consensus 96 ~v~~~~~--------------------------------------------~~~~~lv~e~~~g~~L~~~~~~------~ 125 (198)
T cd05144 96 PVPKPID--------------------------------------------WNRHAVVMEYIDGVELYRVRVL------E 125 (198)
T ss_pred CCCceee--------------------------------------------cCCceEEEEEeCCcchhhcccc------c
Confidence 22221 1123899999986 66554321 3
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhc
Q 000993 520 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 569 (1196)
Q Consensus 520 ~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~ 569 (1196)
....++.+|+.++.++|+.||+||||||+||+++.++.++|+|||++...
T Consensus 126 ~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 126 DPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred cHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEEEECCccccC
Confidence 45678899999999999999999999999999999999999999999654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.8e-15 Score=188.29 Aligned_cols=237 Identities=20% Similarity=0.301 Sum_probs=163.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC---CCCeeeeeeeeeecCccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ---HQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~---HpnIV~l~~~~~e~~~~~ 456 (1196)
...|.+.+.||+|+||+||+|.+.. |+.||+|+-+..... +|+--.+++.+|+ -+-|..+..+++
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~W-----EfYI~~q~~~RLk~~~~~~~~~~~~a~~------ 764 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPW-----EFYICLQVMERLKPQMLPSIMHISSAHV------ 764 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCce-----eeeehHHHHHhhchhhhcchHHHHHHHc------
Confidence 4678999999999999999999985 999999986543321 1222233444554 122333332221
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
-.+.-++|+||.+ |+|.++++..+.+++..+..+..|++.-+++|
T Consensus 765 ----------------------------------~~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~l 810 (974)
T KOG1166|consen 765 ----------------------------------FQNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHL 810 (974)
T ss_pred ----------------------------------cCCcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHH
Confidence 1122379999997 89999999888899999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecC-------CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 536 HGQGIIHRDLTPNNIFFDA-------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~-------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
|..+|||+||||+|+||.. ..-++|+|||.+-.+..-. .+ ..-+..++|-.+-.+|.+.|
T Consensus 811 H~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp-----------~~--~~F~~~~~td~f~C~EM~~g 877 (974)
T KOG1166|consen 811 HAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFP-----------DG--TKFKAVWHTDLFDCIEMREG 877 (974)
T ss_pred HhcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcC-----------CC--cEEeeeeccccchhHHHhcC
Confidence 9999999999999999943 2349999999986432110 00 12245678889999999999
Q ss_pred CCCCCCcchhHHHHHHHHHhhcCCchhHHHHHHHHHhhhcCC-CCCccccCC-HHH-HHHHHHcccCCCCCCCCHHHHH
Q 000993 609 WPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGE-LPPSWVAKF-SEQ-ESLLRRLMSPSPSDRPSATELL 684 (1196)
Q Consensus 609 ~~~~s~ksDVwSlGviLyELltPf~~~~~~~~~~~~l~~~~~-~p~~~~~~~-~~l-~~LI~~cL~~dP~~RPta~eiL 684 (1196)
..++..+|.|.|+.+++-|+ |...+. ....... .+..+...+ .++ .+++..+|+.|-..=|...++.
T Consensus 878 -rpWtYq~DyfGlAa~~h~mL--FG~y~q------~~~g~~~~~~~~~~Ry~~~~~W~~~F~~lLN~~~~~~p~l~~lr 947 (974)
T KOG1166|consen 878 -RPWTYQIDYFGLAATVHVML--FGKYME------VKNGSSWMVKTNFPRYWKRDMWNKFFDLLLNPDCDTLPNLQELR 947 (974)
T ss_pred -CCCchhhhhHHHHHHHHHHH--HHHHHH------hcCCcceeccccchhhhhHHHHHHHHHHHhCcCcccchhHHHHH
Confidence 56999999999999999998 433333 1111111 111111111 122 4688888885555445555554
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.1e-14 Score=156.41 Aligned_cols=131 Identities=27% Similarity=0.322 Sum_probs=101.1
Q ss_pred eeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc-h-----hHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 388 PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-P-----VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 388 ~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-~-----~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
.||+|+||.||+|.+ +|..+++|+........ . ...++.+|+.+++.++|+++....-.+..
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~---------- 68 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVD---------- 68 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE----------
Confidence 389999999999985 57899999865432111 1 13567789999999998875433322211
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
....+++|||++| +|.+++..... .++.+++.+|.+||+.|+
T Consensus 69 ------------------------------~~~~~lv~e~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi 111 (199)
T TIGR03724 69 ------------------------------PDNKTIVMEYIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGI 111 (199)
T ss_pred ------------------------------CCCCEEEEEEECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCe
Confidence 2234899999975 88887754321 788999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchh
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKF 568 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~ 568 (1196)
+|||++|.||+++ ++.++++|||+++.
T Consensus 112 ~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 112 VHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred ecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999999999999 89999999999875
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.8e-16 Score=191.83 Aligned_cols=260 Identities=24% Similarity=0.359 Sum_probs=198.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCcccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLD-GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~-g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~ 457 (1196)
...|.+.+.||+|+|+.|-.+....+ ...+|+|.+.....+.....++..|..+-..+. |+|++.+++...
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~------- 91 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSS------- 91 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccC-------
Confidence 35678888899999999988877533 446778877665545555566677888878886 999999987652
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHH-hhcC-CCCHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVF-ESYD-HFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l-~~~~-~l~e~~~~~i~~qIa~gL~y 534 (1196)
.....++.++|..| ++...+ .... ..+...+..++.|+..++.|
T Consensus 92 ---------------------------------~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~ 138 (601)
T KOG0590|consen 92 ---------------------------------SPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSY 138 (601)
T ss_pred ---------------------------------CCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccc
Confidence 34566888999754 777777 5444 67788889999999999999
Q ss_pred HH-hCCCcccCCCcCcEEecCCC-CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccc-cccCCCchhccCCCC
Q 000993 535 IH-GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG-TYFYTAPEIEQGWPK 611 (1196)
Q Consensus 535 LH-s~gIiHrDLKp~NILld~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-T~~Y~APE~l~~~~~ 611 (1196)
+| ..++.||||||+|.+++..+ .++++|||+|..+... .+........+| ++.|+|||.+.+...
T Consensus 139 ~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~------------~g~~~~~~~~~g~s~~y~a~E~~~~~~~ 206 (601)
T KOG0590|consen 139 LHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK------------NGAERSLKDRCGSSPPYGAPEHLSGKAY 206 (601)
T ss_pred cCcccccccCCCCCccchhccCCCcccCCCchhhcccccc------------CCcceeeecccCCCCCCCCcccccchhh
Confidence 99 99999999999999999999 9999999999876431 111122345578 999999999988556
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC--CCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE--LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~--~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
..+..|+||.|+++.-+++ |+............+..... ....|........+++.+++..+|..|.+.+++-.+
T Consensus 207 ~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 207 RGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred cCCCcccccccccccccccCCCCccccccccccceeecccccccccCccccCChhhhhcccccccCCchhcccccccccc
Confidence 7889999999999999985 65544333222111221211 234566677788999999999999999999999999
Q ss_pred cCCCC
Q 000993 687 ALPPQ 691 (1196)
Q Consensus 687 ~~~~~ 691 (1196)
+|...
T Consensus 287 ~~~~~ 291 (601)
T KOG0590|consen 287 NWLSS 291 (601)
T ss_pred ccccc
Confidence 98876
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.1e-14 Score=177.49 Aligned_cols=137 Identities=26% Similarity=0.269 Sum_probs=105.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-Cc-----hhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SL-----PVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~-----~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
..|...+.||+|+||+||+|.+. +..+++|+...+.. .. ....++.+|+.+++.++|++|+..+.++..
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~--- 407 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVD--- 407 (535)
T ss_pred cccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEe---
Confidence 34456789999999999999875 44455554322211 11 123568899999999999998876544321
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
....++||||++| +|.+++. ....++.|++.+|.
T Consensus 408 -------------------------------------~~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~ 442 (535)
T PRK09605 408 -------------------------------------PEEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVA 442 (535)
T ss_pred -------------------------------------CCCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHH
Confidence 1235899999975 8888775 35678999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchh
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 568 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~ 568 (1196)
|||++|++||||||+|||+ .++.++|+|||+++.
T Consensus 443 ~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 443 KLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred HHHhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 9999999999999999999 678999999999975
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.55 E-value=2e-14 Score=152.66 Aligned_cols=160 Identities=21% Similarity=0.253 Sum_probs=94.2
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCC
Q 000993 386 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 465 (1196)
Q Consensus 386 ~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 465 (1196)
.+.||+|+||.||+|.+. +|+.||||+++............. +...+....|++...+...+.+...... ..+...
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~e~~~l--~~l~~~ 77 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYR-TGDYRFGRKKSNWRYLSRLWAEKEFRNL--KRLYEA 77 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhh-HHHHHhccCCcchhhhhhHHHHHHHHHH--HHHHHc
Confidence 367999999999999987 899999999875432221111111 0122333333333322211111000000 000000
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeecCC-CHH-HHHhhcCCCCHHHHHHHHHHHHHHHHHHHh-CCCcc
Q 000993 466 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLR-QVFESYDHFDKELAWHLFRQIVEGLAHIHG-QGIIH 542 (1196)
Q Consensus 466 g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~-~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs-~gIiH 542 (1196)
+..... . ......+++|||+++ ++. ..+.... . ...++.++.+++.++.++|+ +||+|
T Consensus 78 ~~~~~~-----------~------~~~~~~~lv~e~~~g~~~~~~~l~~~~-~-~~~~~~~~~~~~~~l~~lh~~~~ivH 138 (187)
T cd05119 78 GVPVPK-----------P------IDLNRHVLVMEFIGGDGIPAPRLKDVR-L-LEDPEELYDQILELMRKLYREAGLVH 138 (187)
T ss_pred CCCCCc-----------e------EecCCCEEEEEEeCCCCccChhhhhhh-h-cccHHHHHHHHHHHHHHHhhccCcCc
Confidence 000000 0 000124899999986 221 1121111 1 16788999999999999999 99999
Q ss_pred cCCCcCcEEecCCCCeEEeccCcchhc
Q 000993 543 RDLTPNNIFFDARNDIKIGDFGLAKFL 569 (1196)
Q Consensus 543 rDLKp~NILld~~~~vKL~DFGlA~~~ 569 (1196)
|||||+||+++ ++.++|+|||.+...
T Consensus 139 ~Dl~p~Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 139 GDLSEYNILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred CCCChhhEEEE-CCcEEEEECcccccc
Confidence 99999999999 899999999999754
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >TIGR02367 PylS pyrrolysyl-tRNA synthetase | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.3e-13 Score=156.96 Aligned_cols=123 Identities=11% Similarity=0.158 Sum_probs=102.0
Q ss_pred hhHHHHHHHHHHHHHcCCcccccccee---e---cCC--CcccccceEEEeecCCceEeecCCCcHHHHHHHHhCC---C
Q 000993 754 LRDYVVQVTKEMFRQHCAKHLEIEPMY---L---LGD--CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQ---K 822 (1196)
Q Consensus 754 ~~~~I~~~i~~~f~~~Gy~~I~tP~~~---~---~~~--~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~~---~ 822 (1196)
-.+.+++.++++|..+||++|.||+|. + .+. +....++||++. +.++||||+|++++|+++.+. .
T Consensus 241 ~~~~Led~IRevfvg~GFqEV~TPtLt~eE~~E~m~~~~g~eI~n~Iyk~e----e~lvLRPdLTPsLaR~La~N~~~l~ 316 (453)
T TIGR02367 241 YLGKLERDITKFFVDRGFLEIKSPILIPAEYIERMGIDNDTELSKQIFRVD----KNFCLRPMLAPNLYNYLRKLDRALP 316 (453)
T ss_pred HHHHHHHHHHHHHHHCCCEEEECCeecchHHHHhhcCccCCcccccceEec----CceEecccCHHHHHHHHHHhhhhcc
Confidence 457999999999999999999999992 2 122 344677899873 368999999999999988743 4
Q ss_pred CceeEEEecCeeecCCCCCCC-cceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEE
Q 000993 823 SSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDI 884 (1196)
Q Consensus 823 ~P~r~~Y~G~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i 884 (1196)
.|+|+||+|+|||+|.++.++ +||+|+|++++|.+...+|+| .++.++|+.||+. |.+
T Consensus 317 ~PqKIFEIGkVFR~E~~~~thlREF~QL~~eIaG~~atfaDle--alL~e~Lr~LGId--fei 375 (453)
T TIGR02367 317 DPIKIFEIGPCYRKESDGKEHLEEFTMLNFCQMGSGCTRENLE--AIIKDFLDHLEID--FEI 375 (453)
T ss_pred CCeeEEEEcCeEecCCCCCCCcCeEEEEEEEEECCCCCHHHHH--HHHHHHHHHCCCc--eEE
Confidence 599999999999998766544 579999999999998888777 5999999999983 666
|
PylS is the archaeal enzyme responsible for charging the pyrrolysine tRNA, PylT, by ligating a free molecule of pyrrolysine. Pyrrolysine is encoded at an in-frame UAG (amber) at least in several corrinoid-dependent methyltransferases of the archaeal genera Methanosarcina and Methanococcoides, such as trimethylamine methyltransferase. |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.46 E-value=6.6e-13 Score=147.01 Aligned_cols=139 Identities=19% Similarity=0.246 Sum_probs=103.4
Q ss_pred eeec-cCCcEEEEEEEEccCCcEEEEEEEecCCC-----------CchhHHHHHHHHHHHHhcCCCCe--eeeeeeeeec
Q 000993 387 QPLG-HGGFGHVVLCKNKLDGRHYAVKKIRLKDK-----------SLPVNDRILREVATLSRLQHQHV--VRYYQAWFET 452 (1196)
Q Consensus 387 ~~LG-~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-----------~~~~~~~~~~Ev~iL~~L~HpnI--V~l~~~~~e~ 452 (1196)
..|| .||.|+||++... +..+|||.+..... +.....++.+|+.++..|+|++| +..+++....
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4577 8889999988774 78899998854221 11223568889999999998885 5555443211
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC--CHHHHHhhcCCCCHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR--TLRQVFESYDHFDKELAWHLFRQIVE 530 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g--sL~~~l~~~~~l~e~~~~~i~~qIa~ 530 (1196)
. ......++||||++| +|.+++.. ..+++.. +.+|+.
T Consensus 115 ~------------------------------------~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~ 153 (239)
T PRK01723 115 H------------------------------------GLFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQ 153 (239)
T ss_pred c------------------------------------CcceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHH
Confidence 0 001123699999975 78888754 3455543 578999
Q ss_pred HHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchh
Q 000993 531 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 568 (1196)
Q Consensus 531 gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~ 568 (1196)
+|.+||++||+||||||.|||++.++.++|+|||.++.
T Consensus 154 ~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 154 LIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred HHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence 99999999999999999999999989999999999874
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.1e-14 Score=167.39 Aligned_cols=258 Identities=25% Similarity=0.358 Sum_probs=188.8
Q ss_pred CceEEeeecc--CCcEEEEEEEE--ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccc
Q 000993 382 DFEELQPLGH--GGFGHVVLCKN--KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 382 ~y~~~~~LG~--G~fG~Vy~a~~--~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~ 456 (1196)
.|.....+|. |.+|.||.+.. ..++..+|+|.-+..........+=++|+...+++ .|+|.++.+..|.
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e------ 188 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWE------ 188 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccc------
Confidence 3445567888 99999999999 88999999998544333223333445677777777 6999999776663
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCC-CCHHHHHHHHHHHHH----H
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH-FDKELAWHLFRQIVE----G 531 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~-l~e~~~~~i~~qIa~----g 531 (1196)
....+|+.+|+|+.+|..+.+.... ++...++..+.+..+ |
T Consensus 189 ----------------------------------~~~~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~a 234 (524)
T KOG0601|consen 189 ----------------------------------GSGILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTA 234 (524)
T ss_pred ----------------------------------cCCcceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhccccc
Confidence 2456799999999988888776554 889999999999999 9
Q ss_pred HHHHHhCCCcccCCCcCcEEecCC-CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 610 (1196)
|.++|+.+++|-|+||.||++..+ ..++++|||+...+......... .......|...|++||.+++
T Consensus 235 l~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~----------~~~~r~~~~~~Y~~ke~~~~-- 302 (524)
T KOG0601|consen 235 LSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVF----------KVSKRPEGDCIYAAKELLNG-- 302 (524)
T ss_pred ccccCCCcccccccchhheecccccceeecCCcceeEEccCCccccce----------eeeecCCCCceEeChhhhcc--
Confidence 999999999999999999999999 88999999999877544322111 11122267888999999987
Q ss_pred CCCCcchhHHHHHHHHHhhcCCchhHHHH-HHHHHhhhcCCCCCccc-cCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 611 KIDEKADMYSLGIVFFELWHPFSTAMERQ-IVLSDLKQKGELPPSWV-AKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELltPf~~~~~~~-~~~~~l~~~~~~p~~~~-~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
-++.+.|+||+|.++.+..+......... .....+ ....+|..+. ..+..+...+..|++.+|..|+++..++.+.+
T Consensus 303 l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~-r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~ 381 (524)
T KOG0601|consen 303 LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQL-RQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNV 381 (524)
T ss_pred ccchHhhhcchhhhhHhhHhhcccccCCCCCCcccc-ccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcccc
Confidence 58999999999999888763111100000 000001 1222343332 44557777999999999999999999999987
Q ss_pred CCCc
Q 000993 689 PPQM 692 (1196)
Q Consensus 689 ~~~~ 692 (1196)
.+.+
T Consensus 382 i~s~ 385 (524)
T KOG0601|consen 382 IHSK 385 (524)
T ss_pred ccch
Confidence 7643
|
|
| >PF00587 tRNA-synt_2b: tRNA synthetase class II core domain (G, H, P, S and T) This Prosite entry contains all class II enzymes | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.7e-13 Score=142.72 Aligned_cols=136 Identities=14% Similarity=0.186 Sum_probs=110.8
Q ss_pred hhHHHHHHHHHHHH-HcCCccccccce----ee--cCCCcccccceEEEeecCCceEeecCCCcHHHHHHHHhC-----C
Q 000993 754 LRDYVVQVTKEMFR-QHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISN-----Q 821 (1196)
Q Consensus 754 ~~~~I~~~i~~~f~-~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~-----~ 821 (1196)
+++.|++.+++.+. ++||++|.||+| .+ .++.....++||++.|.+++.++|||+.+.++++++... +
T Consensus 1 l~~~l~~~~~~~~~~~~G~~ev~~P~l~~~~~~~~sg~~~~~~~~~~~~~~~~~~~~~L~pt~~~~~~~~~~~~~~~~~~ 80 (173)
T PF00587_consen 1 LRNALERFIREEFVLKFGFQEVDTPILIPSEVWEKSGHWDNFSDEMFKVKDRGDEEYCLRPTSEPGIYSLFKNEIRSSYR 80 (173)
T ss_dssp HHHHHHHHHHHHHHHHTTEEEEB--SEEEHHHHHHHSHHHHHGGGSEEEEETTTEEEEE-SSSHHHHHHHHHHHEEBHGG
T ss_pred CHHHHHHHHHHHhHHhcCCEEEECCeEEehHHhhhccccccccCCeeeeeecccccEEeccccccceeeeecceeeeccc
Confidence 46789999999999 999999999999 22 233455678899999999999999999999999988772 3
Q ss_pred CCceeEEEecCeeecC-CCC---CCCcceeEeEEEEeCCCC--ccchHHHHHHHHHHHHHcCCCCceEEEeCcHH
Q 000993 822 KSSFKRYEISSVYRRA-IGH---SPPNRYLQGDFDIIGGAS--ALTEAEVLKVTMDIVTRFFHAESCDIHLNHGD 890 (1196)
Q Consensus 822 ~~P~r~~Y~G~VfR~e-~~~---~~~~ef~Q~GvEiiG~~~--~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~~~ 890 (1196)
..|+|+|++|++||+| ++. .|.+||+|.++++||.++ .....+++.++.++++.||+++ +.+.+++++
T Consensus 81 ~LP~~~~~~g~~fR~E~~~~~gl~R~reF~~~e~~~f~~~~~~~~~~~~~~~~~~~i~~~lgl~~-~~~~~~~~~ 154 (173)
T PF00587_consen 81 DLPLKLYQIGTCFRNEARPTRGLFRLREFTMDEMHIFCTPEQSEEEFEELLELYKEILEKLGLEP-YRIVLSSSG 154 (173)
T ss_dssp GSSEEEEEEEEEEBSSSSSBSTTTS-SEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHTTSGC-EEEEEEETC
T ss_pred cCCeEEeecccccccccccccccceeeEeeeeceEEEeCCcccHHHHHHHHHHHHHHHHHcCCce-EEEEEcCCC
Confidence 4699999999999998 444 345569999999999983 3566799999999999999953 999998754
|
seryl tRNA synthetase structure; InterPro: IPR002314 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This domain includes the glycine, histidine, proline, threonine and serine tRNA synthetases.; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 3UH0_A 3UGT_C 3UGQ_A 1B76_B 1GGM_B 1ATI_A 1ADY_C 1ADJ_C 2I4O_A 2I4M_B .... |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.4e-13 Score=167.32 Aligned_cols=281 Identities=23% Similarity=0.255 Sum_probs=202.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCch-hHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-VNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~-~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
-.+++.+.+-+-+|+++.++.+.-..+|...++|+......-.. ..+....+-.++-.-.||-++...-.
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s--------- 872 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPS--------- 872 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCC---------
Confidence 46788999999999999999998888887777776543221100 11111112111111223333332110
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
| .....++++|+|.+ ++|...++..+..+.+-++.++..+..+++|||
T Consensus 873 ---------------~----------------~~rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~ 921 (1205)
T KOG0606|consen 873 ---------------F----------------PCRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLH 921 (1205)
T ss_pred ---------------C----------------CCCCCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccc
Confidence 0 12345789999996 589999998888999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccc--ccc----------C----CCCCCCCCCccccCcCccccccC
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQ--LDQ----------D----AAFPTDTGGVSVDGTGQVGTYFY 600 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~--~~~----------~----~~~~~~~~~~~~~~~~~~GT~~Y 600 (1196)
+..+.|||++|.|+++..+++.+++|||.......-. ... . ...+....+..+......||+.|
T Consensus 922 s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~ 1001 (1205)
T KOG0606|consen 922 SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDY 1001 (1205)
T ss_pred cchhhcccccccchhhcccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcc
Confidence 9999999999999999999999999999554332110 000 0 00000000111223456899999
Q ss_pred CCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCC
Q 000993 601 TAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677 (1196)
Q Consensus 601 ~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~R 677 (1196)
.+||.+.+ ......+|+|++|++++|.++ ||.......++..++......|......++++++++.+++..+|.+|
T Consensus 1002 laPe~~lg-~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr 1080 (1205)
T KOG0606|consen 1002 LAPEILLG-RRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQR 1080 (1205)
T ss_pred cCCccccc-ccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhc
Confidence 99999998 567889999999999999996 88888888887766665555565666677899999999999999999
Q ss_pred CCHH---HHHhccCCCCchHHHHHHH
Q 000993 678 PSAT---ELLQDALPPQMEYELLDNI 700 (1196)
Q Consensus 678 Pta~---eiL~~~~~~~~~~~~~~~~ 700 (1196)
..+. ++-.|+||+...|+.+..-
T Consensus 1081 ~~a~~~~e~k~~~~~~~~~~~~l~~q 1106 (1205)
T KOG0606|consen 1081 LGAKGAAEVKGHPFFQDVDWENLALQ 1106 (1205)
T ss_pred cCcccccccccCCccCCCCccccccc
Confidence 9877 8899999999999877553
|
|
| >PRK04172 pheS phenylalanyl-tRNA synthetase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.1e-12 Score=159.49 Aligned_cols=147 Identities=10% Similarity=0.047 Sum_probs=118.2
Q ss_pred cccccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccceee---------c----------C----CC-c--c
Q 000993 734 TLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYL---------L----------G----DC-P--Q 787 (1196)
Q Consensus 734 ~l~~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~---------~----------~----~~-~--~ 787 (1196)
+...|-...| +|++|.+...++++++.++++|.++||++|.||.+.. . . +. . .
T Consensus 215 ~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~f~~~Gf~e~~~p~vE~~~~nfd~lf~p~~hpaR~~~dtf~~~~~~~~~ 293 (489)
T PRK04172 215 FRPYNVKAPP-PKIYPGKKHPYREFIDEVRDILVEMGFEEMKGPLVETEFWNFDALFQPQDHPAREMQDTFYLKYPGIGD 293 (489)
T ss_pred CccceeCCCC-CCCCCCCCChHHHHHHHHHHHHHHCCCEEeeCCeeeecCcccccccCCCCCCCCCccceEEECCccccc
Confidence 3445555556 8999999999999999999999999999999999931 1 0 00 0 0
Q ss_pred ----c----------------ccceEEEeecCCceEeecCCCcHHHHHHHHhCCCCceeEEEecCeeecCCCCCC-Ccce
Q 000993 788 ----F----------------KRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSP-PNRY 846 (1196)
Q Consensus 788 ----~----------------~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~~~~P~r~~Y~G~VfR~e~~~~~-~~ef 846 (1196)
. .-=+|.|.+..++.++|||++|++++|+++++...|+|+|++|+|||++.++.+ .+||
T Consensus 294 ~~~~~~~~v~~~he~g~~~~~~~~~y~~~~~~~~~~~LR~~~T~~~~r~l~~~~~~p~rlFeiGrVFR~e~~d~~~l~Ef 373 (489)
T PRK04172 294 LPEELVERVKEVHEHGGDTGSRGWGYKWDEDIAKRLVLRTHTTALSARYLASRPEPPQKYFSIGRVFRPDTIDATHLPEF 373 (489)
T ss_pred CcHHHHHHHHHHHhccCCCCCccccCCcchhhhhccccccCChHHHHHHHHhcCCCCeEEEEecceEcCCCCCcccCCch
Confidence 0 001577878888999999999999999999887889999999999999886644 4689
Q ss_pred eEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEE
Q 000993 847 LQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDI 884 (1196)
Q Consensus 847 ~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i 884 (1196)
+|+++.++|.+ ...++++.++.+++..+|+.+ +.+
T Consensus 374 ~ql~~~i~G~~--~~f~elkg~l~~ll~~lGi~~-~~~ 408 (489)
T PRK04172 374 YQLEGIVMGED--VSFRDLLGILKEFYKRLGFEE-VKF 408 (489)
T ss_pred heEEEEEEeCC--CCHHHHHHHHHHHHHHhCCce-EEE
Confidence 99999999974 347899999999999999853 444
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.6e-12 Score=131.14 Aligned_cols=131 Identities=28% Similarity=0.328 Sum_probs=104.8
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCC--CCeeeeeeeeeecCccccCCCCc
Q 000993 385 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH--QHVVRYYQAWFETGVADFDGDSM 462 (1196)
Q Consensus 385 ~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~H--pnIV~l~~~~~e~~~~~~~~~~~ 462 (1196)
+++.||.|.++.||++... +..+++|....... ...+.+|+..++.++| +++++++..+.
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~------------ 63 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGE------------ 63 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcC------------
Confidence 3578999999999999985 47899998754322 4568899999999976 47888775431
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---
Q 000993 463 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ--- 538 (1196)
Q Consensus 463 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~--- 538 (1196)
.....|++|||++| .+..+ +......++.+++.+|++||..
T Consensus 64 ----------------------------~~~~~~~v~e~~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~ 108 (155)
T cd05120 64 ----------------------------SDGWSYLLMEWIEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLL 108 (155)
T ss_pred ----------------------------CCCccEEEEEecCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCce
Confidence 12356999999976 44332 4556677889999999999985
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKF 568 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~ 568 (1196)
+++|+||+|.||+++..+.+++.|||.++.
T Consensus 109 ~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 109 VLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred EEEecCCCcceEEEECCcEEEEEecccccC
Confidence 699999999999999989999999999874
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >cd00778 ProRS_core_arch_euk Prolyl-tRNA synthetase (ProRS) class II core catalytic domain | Back alignment and domain information |
|---|
Probab=99.36 E-value=6.9e-13 Score=148.64 Aligned_cols=144 Identities=10% Similarity=0.111 Sum_probs=115.8
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec---CCCcccccceEEEeecCCc----eEeecCC
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL---GDCPQFKRNTVKLLTHGGD----LLELSHE 808 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~---~~~~~~~~~my~f~D~~G~----~laLRPD 808 (1196)
.+.|+.+++|.++.+.+.|++.+++.+.++||++|.||.+ .+. ++.+...++||++.|.+++ .++|||+
T Consensus 20 ~~~G~~~~lP~g~~l~~~l~~~~~~~~~~~G~~ev~~P~l~~~~~~~~~sg~~~~f~~~~f~~~~~~~~~~~~~~~L~Pt 99 (261)
T cd00778 20 PVKGCMVFRPYGYAIWENIQKILDKEIKETGHENVYFPLLIPESELEKEKEHIEGFAPEVAWVTHGGLEELEEPLALRPT 99 (261)
T ss_pred CCCCeEEEcccHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHhhhhhcchhhcCcceEEEEecCCcccCCcEEEcCC
Confidence 4679999999999999999999999999999999999999 222 2245568899999998754 8999999
Q ss_pred ----CcHHHHHHHHhCCCCceeEEEecCeeecCCCC----CCCcceeEeEEEE-eCCCCccch--HHHHHHHHHHHHHc-
Q 000993 809 ----LRLPFIRWAISNQKSSFKRYEISSVYRRAIGH----SPPNRYLQGDFDI-IGGASALTE--AEVLKVTMDIVTRF- 876 (1196)
Q Consensus 809 ----~T~~iaR~~a~~~~~P~r~~Y~G~VfR~e~~~----~~~~ef~Q~GvEi-iG~~~~~aD--aEvI~la~~~L~~l- 876 (1196)
+|..+++.+.+++..|+|+|++|++||+|..+ .|.+||+|.++.. +...+...+ .+++.+..++++.|
T Consensus 100 ~e~~~~~~~~~~i~s~r~LPlr~~~~~~~fR~E~~~~~Gl~R~reF~~~d~h~~~~~~e~~~~~~~~~~~~~~~i~~~ll 179 (261)
T cd00778 100 SETAIYPMFSKWIRSYRDLPLKINQWVNVFRWETKTTRPFLRTREFLWQEGHTAHATEEEAEEEVLQILDLYKEFYEDLL 179 (261)
T ss_pred CCHHHHHHHHhhccchhhcCHHHHhhhhhccCCCCCCCceeEeeeeeeeceeeccCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 77777787777777899999999999997654 2445799999985 565443222 37788889999998
Q ss_pred CCCCceEEE
Q 000993 877 FHAESCDIH 885 (1196)
Q Consensus 877 gi~~~~~i~ 885 (1196)
|+. +.+.
T Consensus 180 gl~--~~~~ 186 (261)
T cd00778 180 AIP--VVKG 186 (261)
T ss_pred CCe--EEEe
Confidence 885 5443
|
ProRS is a homodimer. It is responsible for the attachment of proline to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain. This subfamily contains the core domain of ProRS from archaea, the cytoplasm of eukaryotes and some bacteria. |
| >PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis | Back alignment and domain information |
|---|
Probab=99.32 E-value=5.8e-12 Score=118.72 Aligned_cols=90 Identities=24% Similarity=0.419 Sum_probs=84.3
Q ss_pred eEEEEEcCCC---chHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCc
Q 000993 1092 SVLVCSRGGG---GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKK 1168 (1196)
Q Consensus 1092 ~vlv~~~~~~---~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~ 1168 (1196)
+|+|++.+ . +...+|.++++.||+.|++|++++. +.++++++++|++.|+||++++|++|.++|+|+||++.+++
T Consensus 1 qv~Ii~~~-~~~~~~~~~a~~l~~~L~~~gi~v~~d~~-~~~~~k~~~~a~~~g~p~~iiiG~~e~~~~~v~vk~~~~~~ 78 (94)
T PF03129_consen 1 QVVIIPVG-KKDEEIIEYAQELANKLRKAGIRVELDDS-DKSLGKQIKYADKLGIPFIIIIGEKELENGTVTVKDRDTGE 78 (94)
T ss_dssp SEEEEESS-CSHHHHHHHHHHHHHHHHHTTSEEEEESS-SSTHHHHHHHHHHTTESEEEEEEHHHHHTTEEEEEETTTTE
T ss_pred CEEEEEeC-CCcHHHHHHHHHHHHHHHHCCCEEEEECC-CCchhHHHHHHhhcCCeEEEEECchhHhCCEEEEEECCCCc
Confidence 57888986 5 6788999999999999999998885 78999999999999999999999999999999999999999
Q ss_pred ccccchHHHHHHHHH
Q 000993 1169 EKEVQRESLVRFLLD 1183 (1196)
Q Consensus 1169 q~~v~~~el~~~l~~ 1183 (1196)
+..+++++++++|++
T Consensus 79 ~~~v~~~el~~~l~~ 93 (94)
T PF03129_consen 79 QETVSLEELIEYLKE 93 (94)
T ss_dssp EEEEECCHHHHHHHH
T ss_pred EEEEEHHHHHHHHhh
Confidence 999999999999876
|
This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D .... |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.4e-12 Score=152.66 Aligned_cols=249 Identities=25% Similarity=0.274 Sum_probs=181.3
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEc-cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecC
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNK-LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~-~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~ 453 (1196)
.++++.+|.++..||.|.|+.|+.+..+ .++..|++|.+............-..|+.+...+ .|.++++++..|.+
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~-- 337 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ-- 337 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccc--
Confidence 5678899999999999999999998766 6788999997764444333333445677777777 69999999888843
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL 532 (1196)
....||..|||. +++...+.....+++...+++..|++.++
T Consensus 338 --------------------------------------~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 338 --------------------------------------LRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred --------------------------------------cccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 345579999995 46555554445688889999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCC-CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCC-CchhccCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYT-APEIEQGWP 610 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~-APE~l~~~~ 610 (1196)
.++|+..++|+|+||+||++..+ +..+++|||..+.+... ......+-+++ .+|++....
T Consensus 380 ~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~------------------~~~~~~~~r~~p~~~~~~e~~ 441 (524)
T KOG0601|consen 380 NVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFS------------------SGVFHHIDRLYPIAEILLEDY 441 (524)
T ss_pred ccccchhhhcccccccceeeccchhhhhcccccccccccee------------------cccccccccccccchhhcccc
Confidence 99999999999999999999886 78899999998643211 11122333444 366666556
Q ss_pred CCCCcchhHHHHHHHHHhhc--CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 611 KIDEKADMYSLGIVFFELWH--PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt--Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
.+..++|++|||..+.+..+ |+..... ....+ ..+..|-. ......+..+.+.++.+++..||.+.++..|.
T Consensus 442 ~~~~~~~~~sl~~~~~e~~~~~~ls~~~~--~~~~i--~~~~~p~~-~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~ 515 (524)
T KOG0601|consen 442 PHLSKADIFSLGLSVDEAITGSPLSESGV--QSLTI--RSGDTPNL-PGLKLQLQVLLKVMINPDRKRRPSAVELSLHS 515 (524)
T ss_pred ccccccccccccccccccccCcccCcccc--cceee--ecccccCC-CchHHhhhhhhhhhcCCccccchhhhhhcccc
Confidence 78899999999999999886 3322211 11111 12222222 22225678899999999999999999988775
|
|
| >COG0442 ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.28 E-value=9.8e-12 Score=147.79 Aligned_cols=398 Identities=12% Similarity=0.080 Sum_probs=231.0
Q ss_pred ccccccccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce------eecCCCcccccceEEEeecCCceEe
Q 000993 731 HAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLE 804 (1196)
Q Consensus 731 ~~~~l~~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~la 804 (1196)
.++.++ +..+|+.-|+|...++++.|++.+++.+++.|.+++..|+| ..+++++.+.++||+++|.+++.++
T Consensus 28 rAg~i~--~~~~G~y~~lP~g~rv~~kI~~iir~em~~~G~~Evl~P~L~p~eLwkEs~r~~~f~~El~~v~drg~~~l~ 105 (500)
T COG0442 28 RAGMIR--KPVKGLYVWLPLGLRVLEKIENIIREEMDKIGAQEVLFPTLIPAELWKESGRWEGFGPELFRVKDRGDRPLA 105 (500)
T ss_pred hcCcee--cccCceEEECccHHHHHHHHHHHHHHHHHhcCceEEechhcCHHHHHHHhChhhhcchhhEEEEccCCceee
Confidence 445554 37899999999999999999999999999999999999999 2234577788999999999999999
Q ss_pred ecCC----CcHHHHHHHHhCCCCceeEEEecCeeecCC-CC---CCCcceeEeEEEEeCCCCccchHHH---HHHHHHHH
Q 000993 805 LSHE----LRLPFIRWAISNQKSSFKRYEISSVYRRAI-GH---SPPNRYLQGDFDIIGGASALTEAEV---LKVTMDIV 873 (1196)
Q Consensus 805 LRPD----~T~~iaR~~a~~~~~P~r~~Y~G~VfR~e~-~~---~~~~ef~Q~GvEiiG~~~~~aDaEv---I~la~~~L 873 (1196)
|||- +|.-+..++.+++.+|+++|+++++||+|. |. -|.|||+--++.-|-.+...++.+. +.+=.+++
T Consensus 106 L~PTsEe~it~~~~~~i~SYkdLPl~lYQi~~kfRdE~rpr~gllR~REF~mkdaySfh~~~e~a~~~y~~~~~~Y~~if 185 (500)
T COG0442 106 LRPTSEEVITDMFRKWIRSYKDLPLKLYQIQSKFRDEKRPRFGLLRGREFLMKDAYSFHADEEDAEETYEKMLDAYSRIF 185 (500)
T ss_pred eCCCcHHHHHHHHHHHhhhhhhCCcceeeeeeEEeccccCCCCccchheeeecccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 9995 333344477778899999999999999964 44 3566898888887776666666544 45556777
Q ss_pred HHcCCCCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhc-CCCCCcccccccHHH-HHHHHHHhc-CCcHHHHH-
Q 000993 874 TRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMG-SLRPQSSEWKSKWVV-IRRQLLQEL-NLAEAVVN- 949 (1196)
Q Consensus 874 ~~lgi~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d-~~~~~~~~~k~~~~~-~~~~~~~~~-~l~~~~~~- 949 (1196)
.++|+. +...--+.++..+-... + +..+- ..+. +.+.... .-..+-... .+..+..+
T Consensus 186 ~~i~l~--~~~~~ad~g~~Gg~~S~---------e----F~~l~pd~ge----~qi~ts~~y~aN~e~a~~~~~~~~~~~ 246 (500)
T COG0442 186 LRLPLI--FGPVPADEGFIGGSYSH---------E----FEALMPDGGE----DQIATSHHYGANFEKAFIDIKFEDEEE 246 (500)
T ss_pred HhCCce--EEeecccCCCCCCccce---------E----EEEEccCCCc----cEEEEecchHHhHHHhccCCCcccccc
Confidence 777874 56655554443211000 0 00000 0000 0000000 000000000 00000000
Q ss_pred HHHHHHH----HhcCChhhHHHHHhcc-CCCC-------------------------hH---HHHHHHHH--HHHHcCCC
Q 000993 950 RLQTVGL----RFCGAADQALPRLRGA-LPAD-------------------------KP---TRKALDEL--YLRIWRIE 994 (1196)
Q Consensus 950 ~l~~l~~----~~~g~~~~~l~~l~~~-~~~~-------------------------~~---~~~~l~~L--~l~~~g~~ 994 (1196)
.-..+.. -++.. . .+..+ .-++ .. ..+.-.++ .+.. +.
T Consensus 247 ~~~~~v~t~s~~~s~r---~--~~~~i~i~GDn~G~v~Pp~vA~~qV~~~~~~~~ga~~h~~~~~~~rd~~~~l~~--~~ 319 (500)
T COG0442 247 GELEYVHTTSYGISTR---I--IGAAILIHGDNEGLVLPPIVADIQVVIVPIFIKGANEHYKVVNYGRDVAEPLEK--LG 319 (500)
T ss_pred ccceEecccceEEEee---e--eeEEEEEecCCCCccCCchhccceEEEEeccccCcchhhhhhhhhhhhhhhhhh--cc
Confidence 0000000 00000 0 00000 0000 00 00001111 1111 11
Q ss_pred ceEEEc-CC-CCCCCCCcc------ceEEEEEecCCCCccccccccccccccccchhhhhccccccccccCCCCCCCcce
Q 000993 995 KNIYID-AL-MPPIESYHR------NLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVG 1066 (1196)
Q Consensus 995 ~~i~~D-l~-lvrgl~YYT------G~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvG 1066 (1196)
.++..| .+ ...|.-||. |.+|+ -|=||-.-... -+....|...+.-.+-
T Consensus 320 ~~~~~D~~~~~~~G~kl~~~e~ieVghif~-------------------lG~kyse~~~a----~v~~r~g~~~~~~mg~ 376 (500)
T COG0442 320 IRVEGDDRSPDGPGFKLNIWEGIEVGHIFE-------------------LGTKYSEAMNA----TVLDRDGKEQPKTMGC 376 (500)
T ss_pred eEEeccccCCCCCCceeeeeeccccCEEEE-------------------ECchhhhhCee----EEEecCCCccceEEEe
Confidence 234444 21 122221221 22333 35566533111 0122334443344556
Q ss_pred ecccHHHHH-hhccC-----CCCCCCCCCCceEEEEEcCCCc--hHHHHHHHHHHHHHcC-CeEEEeeCCCCCHHHHHHH
Q 000993 1067 ASLALETII-QHYPV-----DFKPVRNEAGTSVLVCSRGGGG--LLVERMELVAELWEEN-IKAQFVPVPDPSLTEQYEY 1137 (1196)
Q Consensus 1067 faiglerl~-~~L~~-----~~~~~~~~~~~~vlv~~~~~~~--~~~~a~~~a~~Lr~~G-i~vel~~~~~~~l~k~~~~ 1137 (1196)
+++|++|++ +++++ +........+.++.|+..+..+ ....|-+++..|..+| ..|.+..+ +.+.+-.+..
T Consensus 377 ygigvsr~v~a~ieq~~d~~gi~w~~a~apf~~~iv~~n~~~~~~~~~~~~~~~~l~~~G~~e~~~ddr-~er~g~k~~~ 455 (500)
T COG0442 377 YGIGVSRLVAALLEQIHDENGIIWPKAIAPFDVHIVPVNTKDFKQAEAAEKLYVELPWCGTVEVLLDDR-DERPGVKFAD 455 (500)
T ss_pred hhhhhhhHHHHHHHHhcccccCccccccCcceeEEEEcCchhHHHHHHhhhHHHHHHhCCchhhhhhhh-ccccCccccC
Confidence 789999954 44442 2222224567788888875322 2233445688889999 88887666 5678888899
Q ss_pred HHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHH
Q 000993 1138 ASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFL 1181 (1196)
Q Consensus 1138 A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l 1181 (1196)
|+-.|+|+.+++|++ .++|.|.+|...+|+...++...++.++
T Consensus 456 a~liGiP~~~~~g~~-~~~g~~e~k~r~~ge~~~~~~~~l~~~~ 498 (500)
T COG0442 456 ADLIGIPLRIVVGKR-LAEGEVEVKCRKCGEKEAVTIEALFARL 498 (500)
T ss_pred CeEecccceeeeccc-ccCCceeEEecCCCchhhccHHHHHHHh
Confidence 999999999999999 8889999999999999988888887654
|
|
| >cd00861 ProRS_anticodon_short ProRS Prolyl-anticodon binding domain, short version found predominantly in bacteria | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.6e-11 Score=114.13 Aligned_cols=91 Identities=15% Similarity=0.178 Sum_probs=81.8
Q ss_pred CceEEEEEcCCC--chHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCC
Q 000993 1090 GTSVLVCSRGGG--GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVK 1167 (1196)
Q Consensus 1090 ~~~vlv~~~~~~--~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g 1167 (1196)
|.++.|++.... ....+|++++..||+.|++|++++. .+++++++++|++.|+++++++|++|+++++|+||++.++
T Consensus 1 P~qv~i~p~~~~~~~~~~~a~~la~~Lr~~g~~v~~d~~-~~~l~k~i~~a~~~g~~~~iiiG~~e~~~~~v~vk~~~~~ 79 (94)
T cd00861 1 PFDVVIIPMNMKDEVQQELAEKLYAELQAAGVDVLLDDR-NERPGVKFADADLIGIPYRIVVGKKSAAEGIVEIKVRKTG 79 (94)
T ss_pred CeEEEEEEcCCCcHHHHHHHHHHHHHHHHCCCEEEEECC-CCCcccchhHHHhcCCCEEEEECCchhhCCEEEEEECCCC
Confidence 457888888521 4678999999999999999998877 5799999999999999999999999999999999999999
Q ss_pred cccccchHHHHHHH
Q 000993 1168 KEKEVQRESLVRFL 1181 (1196)
Q Consensus 1168 ~q~~v~~~el~~~l 1181 (1196)
++..++++++++.+
T Consensus 80 ~~~~~~~~~~~~~l 93 (94)
T cd00861 80 EKEEISIDELLEFL 93 (94)
T ss_pred cceEEeHHHHHHhh
Confidence 99999999997765
|
ProRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only. |
| >PRK09537 pylS pyrolysyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.9e-11 Score=139.53 Aligned_cols=123 Identities=11% Similarity=0.149 Sum_probs=99.0
Q ss_pred hHHHHHHHHHHHHHcCCcccccccee----e--cCC--CcccccceEEEeecCCceEeecCCCcHHHHHHHHhC---CCC
Q 000993 755 RDYVVQVTKEMFRQHCAKHLEIEPMY----L--LGD--CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISN---QKS 823 (1196)
Q Consensus 755 ~~~I~~~i~~~f~~~Gy~~I~tP~~~----~--~~~--~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~---~~~ 823 (1196)
...+++.++++|..+||.+|.||.|. + .+. +....+.||.+ | +.++|||++|++++|+++.+ ...
T Consensus 206 ~s~Le~aIR~~f~~~GF~EV~TPtLt~ee~~e~~g~~~g~~i~~~my~i-d---eel~LRpsLtPsLlr~la~n~k~~~~ 281 (417)
T PRK09537 206 LGKLERDITKFFVDRGFLEIKSPILIPAEYIERMGIDNDTELSKQIFRV-D---KNFCLRPMLAPGLYNYLRKLDRILPD 281 (417)
T ss_pred HHHHHHHHHHHHHHCCCEEEECCeeecHHHHHHhCCCCcccchhhheee-C---CceEehhhhHHHHHHHHHhhhhcccC
Confidence 56899999999999999999999992 1 111 23445778876 2 47999999999999988764 356
Q ss_pred ceeEEEecCeeecCCCCCC-CcceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEE
Q 000993 824 SFKRYEISSVYRRAIGHSP-PNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIH 885 (1196)
Q Consensus 824 P~r~~Y~G~VfR~e~~~~~-~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~ 885 (1196)
|+|+||+|+|||+|.++.+ .+||+|+|++++|.+...+| +..++.++|+.||+. |++.
T Consensus 282 P~RIFEIG~VFR~E~~g~~hlrEf~Ql~~~iiGs~~~f~d--L~~lleeLL~~LGI~--f~i~ 340 (417)
T PRK09537 282 PIKIFEIGPCYRKESDGKEHLEEFTMVNFCQMGSGCTREN--LENIIDDFLKHLGID--YEII 340 (417)
T ss_pred CeeEEEEeceEecCCCCCCCcceEEEEEEEEeCCchHHHH--HHHHHHHHHHHCCCC--cEEe
Confidence 9999999999999876544 45799999999997766655 669999999999984 7766
|
|
| >cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain | Back alignment and domain information |
|---|
Probab=99.23 E-value=7e-11 Score=110.36 Aligned_cols=90 Identities=18% Similarity=0.194 Sum_probs=82.1
Q ss_pred CceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcc
Q 000993 1090 GTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKE 1169 (1196)
Q Consensus 1090 ~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q 1169 (1196)
|.+++|++.+ +....+|+++++.||+.|++|++++. .+++++++++|++.|++++|++|++|.+.++++++||.++++
T Consensus 1 p~~v~ii~~~-~~~~~~a~~~~~~Lr~~g~~v~~d~~-~~~~~~~~~~a~~~g~~~~iiig~~e~~~~~v~lk~~~~~~~ 78 (91)
T cd00860 1 PVQVVVIPVT-DEHLDYAKEVAKKLSDAGIRVEVDLR-NEKLGKKIREAQLQKIPYILVVGDKEVETGTVSVRTRDGGDL 78 (91)
T ss_pred CeEEEEEeeC-chHHHHHHHHHHHHHHCCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEECcchhhCCEEEEEECCCCcc
Confidence 4578888875 66788999999999999999998877 679999999999999999999999999999999999999999
Q ss_pred cccchHHHHHHH
Q 000993 1170 KEVQRESLVRFL 1181 (1196)
Q Consensus 1170 ~~v~~~el~~~l 1181 (1196)
..++++++++.+
T Consensus 79 ~~~~~~~~~~~~ 90 (91)
T cd00860 79 GSMSLDEFIEKL 90 (91)
T ss_pred ceEcHHHHHHHh
Confidence 999999987654
|
ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only. |
| >cd00858 GlyRS_anticodon GlyRS Glycyl-anticodon binding domain | Back alignment and domain information |
|---|
Probab=99.22 E-value=8.7e-11 Score=116.21 Aligned_cols=96 Identities=22% Similarity=0.207 Sum_probs=85.7
Q ss_pred CCCceEEEEEcCC-CchHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCC
Q 000993 1088 EAGTSVLVCSRGG-GGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDV 1166 (1196)
Q Consensus 1088 ~~~~~vlv~~~~~-~~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~ 1166 (1196)
.++.+|+|++.+. +....+|+++++.||++|++|++++. +++++++++|++.|+++++++|++|.++|+|++|++.+
T Consensus 24 lap~~v~Ii~~~~~~~~~~~a~~la~~LR~~gi~v~~d~~--~sl~kqlk~A~k~g~~~~iiiG~~e~~~~~v~lk~l~~ 101 (121)
T cd00858 24 LAPIKVAVLPLVKRDELVEIAKEISEELRELGFSVKYDDS--GSIGRRYARQDEIGTPFCVTVDFDTLEDGTVTIRERDS 101 (121)
T ss_pred cCCcEEEEEecCCcHHHHHHHHHHHHHHHHCCCEEEEeCC--CCHHHHHHHhHhcCCCEEEEECcCchhCCEEEEEECCC
Confidence 4577899988741 34677899999999999999998776 69999999999999999999999999999999999999
Q ss_pred CcccccchHHHHHHHHHHH
Q 000993 1167 KKEKEVQRESLVRFLLDAI 1185 (1196)
Q Consensus 1167 g~q~~v~~~el~~~l~~~l 1185 (1196)
+++..++++++++.+.+.+
T Consensus 102 ~~~~~v~l~~l~~~l~~~~ 120 (121)
T cd00858 102 MRQVRVKIEELPSYLRELI 120 (121)
T ss_pred CceEEEEHHHHHHHHHHHh
Confidence 9999999999988887654
|
GlyRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only. |
| >KOG2324 consensus Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.1e-10 Score=128.54 Aligned_cols=121 Identities=12% Similarity=0.160 Sum_probs=100.0
Q ss_pred cccccccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce------eecCCCcccccceEEEeecCCceEee
Q 000993 732 AGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLEL 805 (1196)
Q Consensus 732 ~~~l~~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~laL 805 (1196)
-|+++ +...|+.-++|...+..+++.+.+..-+..-|.+.|..|++ ...+.++....+||+|.|+.|+.+||
T Consensus 34 ~GfI~--ps~~G~yq~LPlg~R~~~K~~~~l~~~mqs~Ga~kIslp~ls~~~LWekTgRw~~~gsEl~rl~Dr~gkq~cL 111 (457)
T KOG2324|consen 34 VGFIR--PSSPGLYQLLPLGLRVLNKLCRLLDNEMQSGGAQKISLPILSSKELWEKTGRWDAMGSELFRLHDRKGKQMCL 111 (457)
T ss_pred hCccc--cCCCCceeeccchHHHHHHHHHHHHHHHHhccCeeEeecccChHHHHHhcCcccccchhheEeeccCCCEecc
Confidence 34543 56689999999999999999999999999999999999999 33344777889999999999999999
Q ss_pred cCCCcHHHHHHHHhC-----CCCceeEEEecCeeecC-CCCC---CCcceeEeEEEEe
Q 000993 806 SHELRLPFIRWAISN-----QKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDII 854 (1196)
Q Consensus 806 RPD~T~~iaR~~a~~-----~~~P~r~~Y~G~VfR~e-~~~~---~~~ef~Q~GvEii 854 (1196)
-|-----|.+.+++. +..|+++|++|+-||.| +|+. |.|||+.-|.=-|
T Consensus 112 ~pThEE~iT~lmat~~~lsykqlPi~vYQigrKfRDElrpRfGLlRgREFlMKDmYsF 169 (457)
T KOG2324|consen 112 TPTHEEDITALMATYIPLSYKQLPIRVYQIGRKFRDELRPRFGLLRGREFLMKDMYSF 169 (457)
T ss_pred CCchHHHHHHHHHhcCccccccCcEEeeeechhhhhccCccccchhhHHHHHhhhhcc
Confidence 996666777777774 34699999999999996 4664 4456988887444
|
|
| >PTZ00326 phenylalanyl-tRNA synthetase alpha chain; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.8e-10 Score=136.42 Aligned_cols=155 Identities=10% Similarity=0.038 Sum_probs=117.2
Q ss_pred cchhhhHhhHHHHHHHHHHHHHcCCccccccc-e---------eecC--CCcccccceEEEeec----------------
Q 000993 747 YSDLDTELRDYVVQVTKEMFRQHCAKHLEIEP-M---------YLLG--DCPQFKRNTVKLLTH---------------- 798 (1196)
Q Consensus 747 ~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~-~---------~~~~--~~~~~~~~my~f~D~---------------- 798 (1196)
..+...--...+.+.++++|..-||+++.+|. + ++.. |-.=.....|-+.++
T Consensus 223 ~~~g~~HPl~~~~~~i~~if~~mGF~e~~~~~~ves~f~NFDaL~~PqdHPARd~~DTFyl~~~~~~~~~~~p~~~~~~V 302 (494)
T PTZ00326 223 IGGGNLHPLLKVRREFREILLEMGFEEMPTNRYVESSFWNFDALFQPQQHPARDAQDTFFLSKPETSKVNDLDDDYVERV 302 (494)
T ss_pred CCCCCCChHHHHHHHHHHHHHhCCCEEecCCCCccccchhhhhhcCCCCCCCCCcCceEEEcCccccccccCcHHHHHHH
Confidence 33334444578899999999999999998874 3 1111 100012334544321
Q ss_pred ---------------------CCceEeecCCCcHHHHHHHHhCC-------C-CceeEEEecCeeecCCCCCCC-cceeE
Q 000993 799 ---------------------GGDLLELSHELRLPFIRWAISNQ-------K-SSFKRYEISSVYRRAIGHSPP-NRYLQ 848 (1196)
Q Consensus 799 ---------------------~G~~laLRPD~T~~iaR~~a~~~-------~-~P~r~~Y~G~VfR~e~~~~~~-~ef~Q 848 (1196)
..+.++||+++|++.+|+++++. . .|+|+|++|+|||+|..+..+ .+|+|
T Consensus 303 k~~He~G~~gS~Gw~y~W~~e~a~~~vLRtHtTa~~aR~l~~~~~~~~~~~~~~P~k~fsigrVfR~d~~DatH~~eFhQ 382 (494)
T PTZ00326 303 KKVHEVGGYGSIGWRYDWKLEEARKNILRTHTTAVSARMLYKLAQEYKKTGPFKPKKYFSIDRVFRNETLDATHLAEFHQ 382 (494)
T ss_pred HHHhccCCcCCcccccccccchhccccccCCCCHHHHHHHHhhccccccccCCCCceEEecCCEecCCCCCCCcCceeEE
Confidence 11478999999999999999852 2 399999999999998866555 47999
Q ss_pred eEEEEeCCCCccchHHHHHHHHHHHHHcCCCC-ceE-----------------------EEeCcHHHHH-HHHHHcCCCH
Q 000993 849 GDFDIIGGASALTEAEVLKVTMDIVTRFFHAE-SCD-----------------------IHLNHGDLLE-AIWSWAGIKA 903 (1196)
Q Consensus 849 ~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~-~~~-----------------------i~Lg~~~i~~-~~l~~lgl~~ 903 (1196)
+++.++|.+. ++++++.++.++++++|+.+ .|+ |+|++.++++ .+++.+|+++
T Consensus 383 ~Eg~vi~~~~--s~~~L~~~l~~f~~~lG~~~~RfrP~yfPfTEPS~Ev~v~~~~~gkWIEIgg~Gm~rpevL~~~Gi~~ 460 (494)
T PTZ00326 383 VEGFVIDRNL--TLGDLIGTIREFFRRIGITKLRFKPAFNPYTEPSMEIFGYHPGLKKWVEVGNSGIFRPEMLRPMGFPE 460 (494)
T ss_pred EEEEEEeCCC--CHHHHHHHHHHHHHhcCCCceEEecCCCCCCCCeeEEEEEecCCCcEEEEeCcCccCHHHHHhcCCCC
Confidence 9999999775 78999999999999999853 265 8999999998 9999999863
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.2e-10 Score=139.97 Aligned_cols=72 Identities=26% Similarity=0.351 Sum_probs=56.0
Q ss_pred EEEEeeecCC-CHHHHHhhc-CCCCHHHHHHHHHHHHH-HHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhc
Q 000993 495 LYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVE-GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 569 (1196)
Q Consensus 495 l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qIa~-gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~ 569 (1196)
-++||||++| +|.++.... ...+ ...++.+++. .+..+|..|++|+|+||.||+++.++.++|+|||++..+
T Consensus 233 ~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 233 RVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred ceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 4899999976 777665422 1222 2345555655 478899999999999999999999999999999999765
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >smart00591 RWD domain in RING finger and WD repeat containing proteins and DEXDc-like helicases subfamily related to the UBCc domain | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.3e-10 Score=112.18 Aligned_cols=83 Identities=33% Similarity=0.483 Sum_probs=74.7
Q ss_pred cceEeecCCCCCC-CCccceeEEEEEeCCCCCCCCCceeeccCCCCCHHHHHHHHHHHHHHHHHhhhCCCeEEEeeHHHH
Q 000993 17 RAQSKDHSSSTVD-DNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAA 95 (1196)
Q Consensus 17 ~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~Gm~miftl~~~~ 95 (1196)
+.|++.+....++ .+..+.+.|+|.+|++||+++|.+.+....+++..++..|...|.+++++|+ ||+|||++++.+
T Consensus 23 ~~~~i~l~~~~~~~~~~~~~~~l~~~~p~~YP~~~P~i~~~~~~~l~~~~~~~l~~~l~~~~~e~~--g~~~if~~v~~~ 100 (107)
T smart00591 23 PEITIKLSPSSDEGEDQYVSLTLQVKLPENYPDEAPPISLLNSEGLSDEQLAELLKKLEEIAEENL--GEVMIFELVEKL 100 (107)
T ss_pred cEEEEEEecCCCCCCccceEEEEEEECCCCCCCCCCCeEEECCCCCCHHHHHHHHHHHHHHHHHhC--CCEEhhHHHHHH
Confidence 3788888765542 3447999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHh
Q 000993 96 QEFLSE 101 (1196)
Q Consensus 96 ~e~l~~ 101 (1196)
||||++
T Consensus 101 ~e~l~~ 106 (107)
T smart00591 101 QEFLSE 106 (107)
T ss_pred HHHHhc
Confidence 999975
|
|
| >cd00768 class_II_aaRS-like_core Class II tRNA amino-acyl synthetase-like catalytic core domain | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.2e-10 Score=122.56 Aligned_cols=130 Identities=13% Similarity=0.127 Sum_probs=101.7
Q ss_pred hHHHHHHHHHHHHHcCCccccccceee----cCCCcccccceEEEeecCCceEeecCCCcHHHHHHHHhCC-CCceeEEE
Q 000993 755 RDYVVQVTKEMFRQHCAKHLEIEPMYL----LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQ-KSSFKRYE 829 (1196)
Q Consensus 755 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~----~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~~-~~P~r~~Y 829 (1196)
++.+++.++++|..+||.+|.||.|.. ...+.. .+.++.+.+..++..+|||++|+++++.++.|. ..|+|+||
T Consensus 2 ~~~~~~~~r~~l~~~Gf~Ev~t~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~LR~s~~~~l~~~~~~n~~~~~~~lfe 80 (211)
T cd00768 2 RSKIEQKLRRFMAELGFQEVETPIVEREPLLEKAGHE-PKDLLPVGAENEEDLYLRPTLEPGLVRLFVSHIRKLPLRLAE 80 (211)
T ss_pred HHHHHHHHHHHHHHcCCEEeEcceecHHHHHHHcCcc-HhheeeeecCCCCEEEECCCCcHHHHHHHHhhcccCCEEEEE
Confidence 578899999999999999999999922 111211 234666667778999999999999999998764 45999999
Q ss_pred ecCeeecCCCC---CCCcceeEeEEEEeCCCCc--cchHHHHHHHHHHHHHcCCCCceEEE
Q 000993 830 ISSVYRRAIGH---SPPNRYLQGDFDIIGGASA--LTEAEVLKVTMDIVTRFFHAESCDIH 885 (1196)
Q Consensus 830 ~G~VfR~e~~~---~~~~ef~Q~GvEiiG~~~~--~aDaEvI~la~~~L~~lgi~~~~~i~ 885 (1196)
+|+|||.+... .+.+||+|+|++++|.... ....+++.++.++|+.+|+...+.+.
T Consensus 81 ig~vfr~e~~~~~~~~~~ef~~l~~~~~g~~~~~~~~~~~~~~~~~~~l~~lg~~~~~~~~ 141 (211)
T cd00768 81 IGPAFRNEGGRRGLRRVREFTQLEGEVFGEDGEEASEFEELIELTEELLRALGIKLDIVFV 141 (211)
T ss_pred EcceeecCCCccccccceeEEEcCEEEEcCCchhHHHHHHHHHHHHHHHHHcCCCcceEEE
Confidence 99999996543 2346899999999997653 25689999999999999974224543
|
Class II amino acyl-tRNA synthetases (aaRS) share a common fold and generally attach an amino acid to the 3' OH of ribose of the appropriate tRNA. PheRS is an exception in that it attaches the amino acid at the 2'-OH group, like class I aaRSs. These enzymes are usually homodimers. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. The substrate specificity of this reaction is further determined by additional domains. Intererestingly, this domain is also found is asparagine synthase A (AsnA), in the accessory subunit of mitochondrial polymerase gamma and in the bacterial ATP phosphoribosyltransferase regulatory subunit HisZ. |
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.2e-11 Score=145.53 Aligned_cols=154 Identities=19% Similarity=0.304 Sum_probs=93.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC----------------------------c----hhHHHH
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS----------------------------L----PVNDRI 427 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~----------------------------~----~~~~~~ 427 (1196)
..+|+. +.||+|++|+||+|+.+.+|+.||||+++..-.. . +..+.+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 456776 7899999999999999977999999999743100 0 111222
Q ss_pred HHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CH
Q 000993 428 LREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TL 506 (1196)
Q Consensus 428 ~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL 506 (1196)
.+|+...+.. +|+.++...|...... ......| .....-++|||||.| .+
T Consensus 198 ~~ElD~~~Ea--~N~~~~~~~f~~~~~v-~VP~v~~--------------------------d~st~~VLvmE~i~G~~l 248 (537)
T PRK04750 198 HDELDLMREA--ANASQLRRNFEDSDML-YVPEVYW--------------------------DYCSETVMVMERMYGIPV 248 (537)
T ss_pred HHhhCHHHHH--HHHHHHHHHccCCCCe-ecceeec--------------------------ccCCCceEEEeeecCccH
Confidence 3333333322 2333333222110000 0000000 012234799999986 77
Q ss_pred HHH--HhhcC----CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCC----CeEEeccCcchhcc
Q 000993 507 RQV--FESYD----HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN----DIKIGDFGLAKFLK 570 (1196)
Q Consensus 507 ~~~--l~~~~----~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~----~vKL~DFGlA~~~~ 570 (1196)
.++ +...+ .+.+..+..++.||+ ..|++|+|+||.||+++.++ .+++.|||++..+.
T Consensus 249 ~d~~~l~~~g~d~~~la~~~v~~~~~Qif-------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 249 SDVAALRAAGTDMKLLAERGVEVFFTQVF-------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred HhHHHHHhcCCCHHHHHHHHHHHHHHHHH-------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 653 33322 233444445555554 58999999999999999888 89999999998664
|
|
| >cd00862 ProRS_anticodon_zinc ProRS Prolyl-anticodon binding domain, long version found predominantly in eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.3e-10 Score=120.38 Aligned_cols=102 Identities=15% Similarity=0.092 Sum_probs=90.9
Q ss_pred CCCCceEEEEEcCCCc------hHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEE
Q 000993 1087 NEAGTSVLVCSRGGGG------LLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVK 1160 (1196)
Q Consensus 1087 ~~~~~~vlv~~~~~~~------~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~ 1160 (1196)
..+|.+|+|++.+ .. ...+|.++++.||+.|++|+++.....++++++++|+.+|+|++|+||++|+++|+|+
T Consensus 7 ~iAP~qVvIipi~-~~~~~~~~~~~~a~~i~~~Lr~~Girv~~D~r~~~s~g~K~~~ae~~GvP~~I~IG~~Ele~g~V~ 85 (202)
T cd00862 7 RVAPIQVVIVPIG-IKDEKREEVLEAADELAERLKAAGIRVHVDDRDNYTPGWKFNDWELKGVPLRIEIGPRDLEKNTVV 85 (202)
T ss_pred hhcCceEEEEEec-CCccchHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHhHHHHHHHhCCCCEEEEECcchhhCCEEE
Confidence 3578899999985 33 6778999999999999999998874339999999999999999999999999999999
Q ss_pred EEEcCCCcccccchHHHHHHHHHHHHhhc
Q 000993 1161 VRHLDVKKEKEVQRESLVRFLLDAIASQF 1189 (1196)
Q Consensus 1161 vk~l~~g~q~~v~~~el~~~l~~~l~~~~ 1189 (1196)
|++++++++..++++++++.+.+.++.+-
T Consensus 86 v~~Rd~~ek~~v~~~el~~~i~~ll~~i~ 114 (202)
T cd00862 86 IVRRDTGEKKTVPLAELVEKVPELLDEIQ 114 (202)
T ss_pred EEEecCCcceEEEHHHHHHHHHHHHHHHH
Confidence 99999999999999999999887776543
|
ProRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only, and an additional C-terminal zinc-binding domain specific to this subfamily of aaRSs. |
| >cd00738 HGTP_anticodon HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl tRNA synthetases, which are classified as a group of class II aminoacyl-tRNA synthetases (aaRS) | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.1e-10 Score=105.08 Aligned_cols=90 Identities=14% Similarity=0.233 Sum_probs=81.0
Q ss_pred CceEEEEEcCCC---chHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCC
Q 000993 1090 GTSVLVCSRGGG---GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDV 1166 (1196)
Q Consensus 1090 ~~~vlv~~~~~~---~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~ 1166 (1196)
|.+++|++.+ + .....|++++++||+.|++|++... .+++++++++|++.|+++++++|++|+.+++++++++.+
T Consensus 1 p~~v~ii~~~-~~~~~~~~~a~~~~~~Lr~~g~~v~~~~~-~~~~~k~~~~a~~~g~~~~iiig~~e~~~~~v~i~~~~~ 78 (94)
T cd00738 1 PIDVAIVPLT-DPRVEAREYAQKLLNALLANGIRVLYDDR-ERKIGKKFREADLRGVPFAVVVGEDELENGKVTVKSRDT 78 (94)
T ss_pred CeEEEEEECC-CCcHHHHHHHHHHHHHHHHCCCEEEecCC-CcCHhHHHHHHHhCCCCEEEEECCChhhCCEEEEEECCC
Confidence 3578888875 5 6788999999999999999998776 579999999999999999999999999999999999999
Q ss_pred CcccccchHHHHHHH
Q 000993 1167 KKEKEVQRESLVRFL 1181 (1196)
Q Consensus 1167 g~q~~v~~~el~~~l 1181 (1196)
+++..++++++.+.|
T Consensus 79 ~~~~~~~~~~~~~~i 93 (94)
T cd00738 79 GESETLHVDELPEFL 93 (94)
T ss_pred CceeEEEHHHHHhhc
Confidence 999999999887654
|
In aaRSs, the anticodon binding domain is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only. This domain is also found in the accessory subunit of mitochondrial polymerase gamma (Pol gamma b). |
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.08 E-value=8.3e-10 Score=117.77 Aligned_cols=138 Identities=13% Similarity=0.118 Sum_probs=96.9
Q ss_pred eeeccCCcEEEEEEEEcc------CCcEEEEEEEecCCCC--------------------chhHHHHH----HHHHHHHh
Q 000993 387 QPLGHGGFGHVVLCKNKL------DGRHYAVKKIRLKDKS--------------------LPVNDRIL----REVATLSR 436 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~------~g~~vAVK~i~~~~~~--------------------~~~~~~~~----~Ev~iL~~ 436 (1196)
..||.|--+.||.|.... .+..+|||+.+....+ ......+. +|+..|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998653 3579999988643110 01112233 79999988
Q ss_pred cCC--CCeeeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCC-HHHHHhhc
Q 000993 437 LQH--QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT-LRQVFESY 513 (1196)
Q Consensus 437 L~H--pnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gs-L~~~l~~~ 513 (1196)
+.. -++...+.+ ..-+|||||++++ +..-.-+.
T Consensus 83 l~~~Gv~vP~pi~~--------------------------------------------~~~~lvME~Ig~~~~~~~~Lkd 118 (197)
T cd05146 83 MQKAGIPCPEVVVL--------------------------------------------KKHVLVMSFIGDDQVPAPKLKD 118 (197)
T ss_pred HHHcCCCCCeEEEe--------------------------------------------cCCEEEEEEcCCCCccchhhhc
Confidence 843 345554432 1237999999763 32211122
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH-HhCCCcccCCCcCcEEecCCCCeEEeccCcchhc
Q 000993 514 DHFDKELAWHLFRQIVEGLAHI-HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 569 (1196)
Q Consensus 514 ~~l~e~~~~~i~~qIa~gL~yL-Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~ 569 (1196)
..++.+....+..+++.+|..| |..||+|+||++.|||++ ++.+.|+|||.|-..
T Consensus 119 ~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 119 AKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence 3455666778889999999999 899999999999999997 578999999988643
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.8e-10 Score=118.57 Aligned_cols=126 Identities=16% Similarity=0.127 Sum_probs=92.5
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeee-eeeeeeecCccccCCCCcCC
Q 000993 386 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR-YYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 386 ~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~-l~~~~~e~~~~~~~~~~~~~ 464 (1196)
++.|+.|.++.||+++.. +..|++|+...... ....+.+|+.+++.+.+.++++ ++...
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~P~~~~~~--------------- 62 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGIGPKLYYFD--------------- 62 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCCCCceEEEe---------------
Confidence 467899999999999875 88899998753321 1224678999999986655543 33221
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC---
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI--- 540 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI--- 540 (1196)
....++||||++| ++... ......++.+++.+|+.||+.++
T Consensus 63 ---------------------------~~~~~lv~e~i~G~~l~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~ 107 (170)
T cd05151 63 ---------------------------PETGVLITEFIEGSELLTE--------DFSDPENLEKIAKLLKKLHSSPLPDL 107 (170)
T ss_pred ---------------------------CCCCeEEEEecCCCccccc--------cccCHHHHHHHHHHHHHHhCCCCCCc
Confidence 1113799999987 54432 01123456799999999999985
Q ss_pred --cccCCCcCcEEecCCCCeEEeccCcch
Q 000993 541 --IHRDLTPNNIFFDARNDIKIGDFGLAK 567 (1196)
Q Consensus 541 --iHrDLKp~NILld~~~~vKL~DFGlA~ 567 (1196)
+|+|++|.||+++ ++.++++|||.+.
T Consensus 108 ~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 108 VPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred eeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 9999999999999 6789999999986
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1196 | ||||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 1e-47 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 6e-47 | ||
| 1zxe_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 5e-44 | ||
| 3qd2_B | 332 | Crsytal Structure Of Mouse Perk Kinase Domain Lengt | 5e-40 | ||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 2e-39 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 5e-30 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 1e-27 | ||
| 4g84_A | 464 | Crystal Structure Of Human Hisrs Length = 464 | 2e-26 | ||
| 4g85_A | 517 | Crystal Structure Of Human Hisrs Length = 517 | 2e-26 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 7e-21 | ||
| 3p1a_A | 311 | Structure Of Human Membrane-Associated Tyrosine- An | 9e-21 | ||
| 3i79_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 8e-17 | ||
| 3ma6_A | 298 | Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr | 9e-17 | ||
| 3ku2_A | 507 | Crystal Structure Of Inactivated Form Of Cdpk1 From | 1e-16 | ||
| 3hx4_A | 508 | Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg | 1e-16 | ||
| 3i7c_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 2e-16 | ||
| 3lij_A | 494 | Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) | 4e-16 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 5e-16 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 6e-16 | ||
| 2w5a_A | 279 | Human Nek2 Kinase Adp-Bound Length = 279 | 9e-16 | ||
| 2jav_A | 279 | Human Kinase With Pyrrole-Indolinone Ligand Length | 1e-15 | ||
| 1h4l_A | 292 | Structure And Regulation Of The Cdk5-P25(Nck5a) Com | 1e-15 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 1e-15 | ||
| 3dxn_A | 287 | Crystal Structure Of The Calcium-dependent Kinase F | 1e-15 | ||
| 3hzt_A | 467 | Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4 | 2e-15 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 3e-15 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 3e-15 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 3e-15 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 3e-15 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 4e-15 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 4e-15 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 4e-15 | ||
| 1ung_A | 292 | Structural Mechanism For The Inhibition Of Cdk5-P25 | 4e-15 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 4e-15 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 4e-15 | ||
| 4a4x_A | 279 | Nek2-Ede Bound To Cct248662 Length = 279 | 4e-15 | ||
| 3rp9_A | 458 | Crystal Structure Of The Apo Mapk From Toxoplasma G | 4e-15 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 4e-15 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 4e-15 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 4e-15 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 4e-15 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 4e-15 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 4e-15 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 4e-15 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 4e-15 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 4e-15 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 4e-15 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 4e-15 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 4e-15 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 4e-15 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 5e-15 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 5e-15 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 5e-15 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 5e-15 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 6e-15 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 6e-15 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 8e-15 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 8e-15 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 9e-15 | ||
| 1oir_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 1e-14 | ||
| 1h01_A | 298 | Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili | 1e-14 | ||
| 3igo_A | 486 | Crystal Structure Of Cryptosporidium Parvum Cdpk1, | 2e-14 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 2e-14 | ||
| 2br1_A | 297 | Structure-Based Design Of Novel Chk1 Inhibitors: In | 3e-14 | ||
| 1ia8_A | 289 | The 1.7 A Crystal Structure Of Human Cell Cycle Che | 3e-14 | ||
| 1zlt_A | 295 | Crystal Structure Of Chk1 Complexed With A Hymenald | 3e-14 | ||
| 1zys_A | 273 | Co-Crystal Structure Of Checkpoint Kinase Chk1 With | 3e-14 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 4e-14 | ||
| 2x8e_A | 276 | Discovery Of A Novel Class Of Triazolones As Checkp | 5e-14 | ||
| 2ayp_A | 269 | Crystal Structure Of Chk1 With An Indol Inhibitor L | 5e-14 | ||
| 2wei_A | 287 | Crystal Structure Of The Kinase Domain Of Cryptospo | 5e-14 | ||
| 3dfa_A | 286 | Crystal Structure Of Kinase Domain Of Calcium-depen | 5e-14 | ||
| 4fsn_A | 278 | Crystal Structure Of The Chk1 Length = 278 | 6e-14 | ||
| 4fsm_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 7e-14 | ||
| 4fsw_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 7e-14 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 7e-14 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 7e-14 | ||
| 4ft3_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 8e-14 | ||
| 2e9v_A | 268 | Structure Of H-Chk1 Complexed With A859017 Length = | 8e-14 | ||
| 3ot3_A | 273 | X-Ray Crystal Structure Of Compound 22k Bound To Hu | 8e-14 | ||
| 3jvr_A | 271 | Characterization Of The Chk1 Allosteric Inhibitor B | 9e-14 | ||
| 4fst_A | 269 | Crystal Structure Of The Chk1 Length = 269 | 9e-14 | ||
| 2ghg_A | 269 | H-Chk1 Complexed With A431994 Length = 269 | 9e-14 | ||
| 3eb0_A | 383 | Crystal Structure Of Cgd4_240 From Cryptosporidium | 9e-14 | ||
| 4fsy_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 9e-14 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-13 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 2e-13 | ||
| 4fsu_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-13 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 3e-13 | ||
| 3n9x_A | 432 | Crystal Structure Of Map Kinase From Plasmodium Ber | 3e-13 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 3e-13 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 4e-13 | ||
| 3gc9_A | 370 | The Structure Of P38beta C119s, C162s In Complex Wi | 5e-13 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 9e-13 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 9e-13 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 9e-13 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 9e-13 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 1e-12 | ||
| 2i6l_A | 320 | Crystal Structure Of Human Mitogen Activated Protei | 1e-12 | ||
| 2f9g_A | 353 | Crystal Structure Of Fus3 Phosphorylated On Tyr182 | 1e-12 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 1e-12 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 1e-12 | ||
| 3vum_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M7 | 1e-12 | ||
| 1x8b_A | 289 | Structure Of Human Wee1a Kinase: Kinase Domain Comp | 1e-12 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 1e-12 | ||
| 2b9f_A | 353 | Crystal Structure Of Non-Phosphorylated Fus3 Length | 1e-12 | ||
| 2in6_A | 287 | Wee1 Kinase Complex With Inhibitor Pd311839 Length | 1e-12 | ||
| 3bi6_A | 287 | Wee1 Kinase Complex With Inhibitor Pd352396 Length | 1e-12 | ||
| 2z2w_A | 285 | Humand Wee1 Kinase Complexed With Inhibitor Pf03357 | 1e-12 | ||
| 2b9h_A | 353 | Crystal Structure Of Fus3 With A Docking Motif From | 2e-12 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 2e-12 | ||
| 3ttj_A | 464 | Crystal Structure Of Jnk3 Complexed With Cc-359, A | 2e-12 | ||
| 3gc8_A | 370 | The Structure Of P38beta C162s In Complex With A Di | 2e-12 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-12 | ||
| 1cm8_A | 367 | Phosphorylated Map Kinase P38-Gamma Length = 367 | 3e-12 | ||
| 3gp0_A | 348 | Crystal Structure Of Human Mitogen Activated Protei | 3e-12 | ||
| 4ic7_A | 442 | Crystal Structure Of The Erk5 Kinase Domain In Comp | 3e-12 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 3e-12 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 4e-12 | ||
| 1ywr_A | 360 | Crystal Structure Analysis Of Inactive P38 Kinase D | 4e-12 | ||
| 3vul_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 4e-12 | ||
| 1yw2_A | 360 | Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | 4e-12 | ||
| 1jnk_A | 423 | The C-Jun N-Terminal Kinase (Jnk3s) Complexed With | 4e-12 | ||
| 4b99_A | 398 | Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le | 4e-12 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 4e-12 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 5e-12 | ||
| 3fi3_A | 364 | Crystal Structure Of Jnk3 With Indazole Inhibitor, | 5e-12 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 5e-12 | ||
| 2ghl_A | 348 | Mutant Mus Musculus P38 Kinase Domain In Complex Wi | 6e-12 | ||
| 4exu_A | 371 | Mapk13, Inactive Form Length = 371 | 6e-12 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 7e-12 | ||
| 3kvx_A | 364 | Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le | 8e-12 | ||
| 3nie_A | 429 | Crystal Structure Of Pf11_0147 Length = 429 | 8e-12 | ||
| 3fv8_A | 355 | Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le | 9e-12 | ||
| 3coi_A | 353 | Crystal Structure Of P38delta Kinase Length = 353 | 9e-12 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 1e-11 | ||
| 3gcp_A | 360 | Human P38 Map Kinase In Complex With Sb203580 Lengt | 1e-11 | ||
| 3vuk_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M5 | 1e-11 | ||
| 3q5i_A | 504 | Crystal Structure Of Pbanka_031420 Length = 504 | 1e-11 | ||
| 3vui_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 1e-11 | ||
| 1ove_A | 366 | The Structure Of P38 Alpha In Complex With A Dihydr | 1e-11 | ||
| 3vuh_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M3 | 1e-11 | ||
| 2y8o_A | 362 | Crystal Structure Of Human P38alpha Complexed With | 1e-11 | ||
| 3py3_A | 380 | Crystal Structure Of Phosphorylated P38alpha Map Ki | 1e-11 | ||
| 2r9s_A | 356 | C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu | 1e-11 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 1e-11 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 2e-11 | ||
| 3vug_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 2e-11 | ||
| 3tg1_A | 380 | Crystal Structure Of P38alpha In Complex With A Map | 2e-11 | ||
| 3v3v_A | 379 | Structural And Functional Analysis Of Quercetagetin | 2e-11 | ||
| 1lew_A | 360 | Crystal Structure Of Map Kinase P38 Complexed To Th | 2e-11 | ||
| 3fi2_A | 353 | Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib | 2e-11 | ||
| 1y8g_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-11 | ||
| 1bmk_A | 379 | The Complex Structure Of The Map Kinase P38SB218655 | 2e-11 | ||
| 2baq_A | 365 | P38alpha Bound To Ro3201195 Length = 365 | 2e-11 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 2e-11 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 2e-11 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 2e-11 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 2e-11 | ||
| 3p4k_A | 370 | The Third Conformation Of P38a Map Kinase Observed | 2e-11 | ||
| 1ukh_A | 369 | Structural Basis For The Selective Inhibition Of Jn | 2e-11 | ||
| 3elj_A | 369 | Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine | 2e-11 | ||
| 2gtm_A | 348 | Mutated Mouse P38 Map Kinase Domain In Complex With | 2e-11 | ||
| 2fsl_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a+f3 | 2e-11 | ||
| 3e7o_A | 360 | Crystal Structure Of Jnk2 Length = 360 | 2e-11 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 2e-11 | ||
| 2fst_X | 367 | Mitogen Activated Protein Kinase P38alpha (d176a+f3 | 2e-11 | ||
| 2g01_A | 370 | Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit | 2e-11 | ||
| 2puu_A | 348 | Crystal Structure Of P38 Complex With 1-(5-Tert-But | 2e-11 | ||
| 2xrw_A | 371 | Linear Binding Motifs For Jnk And For Calcineurin A | 2e-11 | ||
| 2bal_A | 365 | P38alpha Map Kinase Bound To Pyrazoloamine Length = | 2e-11 | ||
| 3nnx_A | 354 | Crystal Structure Of Phosphorylated P38 Alpha In Co | 2e-11 | ||
| 3e92_A | 371 | Crystal Structure Of P38 Kinase In Complex With A B | 2e-11 | ||
| 3vud_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 2e-11 | ||
| 2xs0_A | 386 | Linear Binding Motifs For Jnk And For Calcineurin A | 2e-11 | ||
| 3od6_X | 360 | Crystal Structure Of P38alpha Y323t Active Mutant L | 2e-11 | ||
| 2o0u_A | 364 | Crystal Structure Of Human Jnk3 Complexed With N-{3 | 2e-11 | ||
| 1oz1_A | 372 | P38 Mitogen-Activated Kinase In Complex With 4-Azai | 2e-11 | ||
| 3ody_X | 360 | Crystal Structure Of P38alpha Y323q Active Mutant L | 2e-11 | ||
| 2gfs_A | 372 | P38 Kinase Crystal Structure In Complex With Ro3201 | 2e-11 | ||
| 1m7q_A | 366 | Crystal Structure Of P38 Map Kinase In Complex With | 2e-11 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 2e-11 | ||
| 4ewq_A | 383 | Human P38 Alpha Mapk In Complex With A Pyridazine B | 2e-11 | ||
| 2npq_A | 367 | A Novel Lipid Binding Site In The P38 Alpha Map Kin | 2e-11 | ||
| 2oza_B | 366 | Structure Of P38alpha Complex Length = 366 | 2e-11 | ||
| 2wqm_A | 310 | Structure Of Apo Human Nek7 Length = 310 | 3e-11 | ||
| 3dt1_A | 383 | P38 Complexed With A Quinazoline Inhibitor Length = | 3e-11 | ||
| 2fso_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a) A | 3e-11 | ||
| 1di9_A | 360 | The Structure Of P38 Mitogen-Activated Protein Kina | 3e-11 | ||
| 3o17_A | 370 | Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3 | 3e-11 | ||
| 3d83_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 3e-11 | ||
| 3k3j_A | 362 | P38alpha Bound To Novel Dfg-Out Compound Pf-0041612 | 3e-11 | ||
| 1bl6_A | 379 | The Complex Structure Of The Map Kinase P38SB216995 | 3e-11 | ||
| 3gcu_A | 360 | Human P38 Map Kinase In Complex With Rl48 Length = | 3e-11 | ||
| 3nnu_A | 354 | Crystal Structure Of P38 Alpha In Complex With Dp13 | 3e-11 | ||
| 2v7o_A | 336 | Crystal Structure Of Human Calcium-Calmodulin-Depen | 3e-11 | ||
| 3odz_X | 360 | Crystal Structure Of P38alpha Y323r Active Mutant L | 3e-11 | ||
| 3kq7_A | 380 | Structure Of Human P38alpha With N-[4-Methyl-3-(6-{ | 3e-11 | ||
| 3hvc_A | 362 | Crystal Structure Of Human P38alpha Map Kinase Leng | 3e-11 | ||
| 2baj_A | 365 | P38alpha Bound To Pyrazolourea Length = 365 | 3e-11 | ||
| 3hrb_A | 359 | P38 Kinase Crystal Structure In Complex With Small | 3e-11 | ||
| 3zsg_A | 362 | X-Ray Structure Of P38alpha Bound To Tak-715 Length | 3e-11 | ||
| 3oef_X | 360 | Crystal Structure Of Y323f Inactive Mutant Of P38al | 3e-11 | ||
| 3fi4_A | 372 | P38 Kinase Crystal Structure In Complex With Ro4499 | 3e-11 | ||
| 3mpt_A | 371 | Crystal Structure Of P38 Kinase In Complex With A P | 3e-11 | ||
| 3hec_A | 348 | P38 In Complex With Imatinib Length = 348 | 3e-11 | ||
| 2lgc_A | 359 | Joint Nmr And X-Ray Refinement Reveals The Structur | 3e-11 | ||
| 3s3i_A | 349 | P38 Kinase Crystal Structure In Complex With Small | 3e-11 | ||
| 1zzl_A | 351 | Crystal Structure Of P38 With Triazolopyridine Leng | 3e-11 | ||
| 1pmn_A | 364 | Crystal Structure Of Jnk3 In Complex With An Imidaz | 3e-11 | ||
| 3k3i_A | 350 | P38alpha Bound To Novel Dgf-Out Compound Pf-0021595 | 3e-11 | ||
| 3d7z_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 3e-11 | ||
| 1ian_A | 366 | Human P38 Map Kinase Inhibitor Complex Length = 366 | 3e-11 | ||
| 3ptg_A | 363 | Design And Synthesis Of A Novel, Orally Efficacious | 3e-11 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 4e-11 | ||
| 2ok1_A | 365 | Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3 | 4e-11 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 4e-11 | ||
| 3oxi_A | 362 | Design And Synthesis Of Disubstituted Thiophene And | 4e-11 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 4e-11 | ||
| 3pze_A | 358 | Jnk1 In Complex With Inhibitor Length = 358 | 4e-11 | ||
| 2bfy_A | 284 | Complex Of Aurora-B With Incenp And Hesperidin. Len | 4e-11 | ||
| 4h36_A | 356 | Crystal Structure Of Jnk3 In Complex With Atf2 Pept | 4e-11 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 4e-11 | ||
| 2b1p_A | 355 | Inhibitor Complex Of Jnk3 Length = 355 | 5e-11 | ||
| 2exc_X | 356 | Inhibitor Complex Of Jnk3 Length = 356 | 5e-11 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 5e-11 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 6e-11 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 6e-11 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 6e-11 | ||
| 3mh2_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 6e-11 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 6e-11 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 6e-11 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 6e-11 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 7e-11 | ||
| 1omw_A | 689 | Crystal Structure Of The Complex Between G Protein- | 7e-11 | ||
| 3psc_A | 695 | Bovine Grk2 In Complex With Gbetagamma Subunits Len | 7e-11 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 7e-11 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 7e-11 | ||
| 3npc_A | 364 | Crystal Structure Of Jnk2 Complexed With Birb796 Le | 7e-11 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 7e-11 | ||
| 3krw_A | 688 | Human Grk2 In Complex With Gbetgamma Subunits And B | 7e-11 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 7e-11 | ||
| 3cik_A | 689 | Human Grk2 In Complex With Gbetagamma Subunits Leng | 7e-11 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 8e-11 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 8e-11 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 8e-11 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 8e-11 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 8e-11 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 8e-11 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 8e-11 | ||
| 3oht_A | 389 | Crystal Structure Of Salmo Salar P38alpha Length = | 1e-10 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 1e-10 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 1e-10 | ||
| 3mtl_A | 324 | Crystal Structure Of The Pctaire1 Kinase In Complex | 1e-10 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 1e-10 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 1e-10 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 1e-10 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 1e-10 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 1e-10 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 1e-10 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 1e-10 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 1e-10 | ||
| 2vrx_A | 285 | Structure Of Aurora B Kinase In Complex With Zm4474 | 1e-10 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 1e-10 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 1e-10 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 1e-10 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 1e-10 | ||
| 2bfx_B | 284 | Mechanism Of Aurora-B Activation By Incenp And Inhi | 1e-10 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 1e-10 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 2e-10 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 2e-10 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 2e-10 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 2e-10 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 2e-10 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 2e-10 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 2e-10 | ||
| 2zoq_A | 382 | Structural Dissection Of Human Mitogen-Activated Ki | 2e-10 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 2e-10 | ||
| 3gi3_A | 360 | Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana | 2e-10 | ||
| 3o8p_A | 360 | Conformational Plasticity Of P38 Map Kinase Dfg Mot | 2e-10 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 2e-10 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 2e-10 | ||
| 2vz6_A | 313 | Structure Of Human Calcium Calmodulin Dependent Pro | 2e-10 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 2e-10 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 2e-10 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 2e-10 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 2e-10 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 2e-10 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 3e-10 | ||
| 3mh0_A | 360 | Mutagenesis Of P38 Map Kinase Eshtablishes Key Role | 3e-10 | ||
| 2wel_A | 327 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 3e-10 | ||
| 3mh3_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 3e-10 | ||
| 2jc6_A | 334 | Crystal Structure Of Human Calmodulin-Dependent Pro | 3e-10 | ||
| 3dls_A | 335 | Crystal Structure Of Human Pas Kinase Bound To Adp | 3e-10 | ||
| 2vn9_A | 301 | Crystal Structure Of Human Calcium Calmodulin Depen | 3e-10 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 3e-10 | ||
| 3mh1_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 3e-10 | ||
| 2bdw_A | 362 | Crystal Structure Of The Auto-Inhibited Kinase Doma | 4e-10 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 4e-10 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 4e-10 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 5e-10 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 5e-10 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 6e-10 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 6e-10 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 6e-10 | ||
| 4bcf_A | 331 | Structure Of Cdk9 In Complex With Cyclin T And A 2- | 6e-10 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 7e-10 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 7e-10 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 8e-10 | ||
| 3blh_A | 331 | Crystal Structure Of Human Cdk9CYCLINT1 Length = 33 | 9e-10 | ||
| 4ec8_A | 373 | Structure Of Full Length Cdk9 In Complex With Cycli | 9e-10 | ||
| 1q3d_A | 424 | Gsk-3 Beta Complexed With Staurosporine Length = 42 | 9e-10 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 1e-09 | ||
| 1i09_A | 420 | Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len | 1e-09 | ||
| 1pyx_A | 422 | Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | 1e-09 | ||
| 4acc_A | 465 | Gsk3b In Complex With Inhibitor Length = 465 | 1e-09 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 1e-09 | ||
| 3mi9_A | 351 | Crystal Structure Of Hiv-1 Tat Complexed With Human | 1e-09 | ||
| 1q5k_A | 414 | Crystal Structure Of Glycogen Synthase Kinase 3 In | 1e-09 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 1e-09 | ||
| 1r0e_A | 391 | Glycogen Synthase Kinase-3 Beta In Complex With 3-I | 1e-09 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 1e-09 | ||
| 3kl8_A | 269 | Camkiintide Inhibitor Complex Length = 269 | 1e-09 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 1e-09 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 1e-09 | ||
| 3kk8_A | 284 | Camkii Substrate Complex A Length = 284 | 1e-09 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 1e-09 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 1e-09 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 1e-09 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 2e-09 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 2e-09 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 2e-09 | ||
| 3soa_A | 444 | Full-Length Human Camkii Length = 444 | 2e-09 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 2e-09 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 2e-09 | ||
| 3l9m_A | 351 | Crystal Structure Of Pkab3 (Pka Triple Mutant V123a | 2e-09 | ||
| 2o5k_A | 372 | Crystal Structure Of Gsk3beta In Complex With A Ben | 2e-09 | ||
| 3say_A | 430 | Crystal Structure Of Human Glycogen Synthase Kinase | 2e-09 | ||
| 3e3p_A | 360 | Glycogen Synthase Kinase From Leishmania Major Leng | 3e-09 | ||
| 4gsb_A | 364 | Monoclinic Crystal Form Of The Apo-Erk2 Length = 36 | 3e-09 | ||
| 3qyw_A | 364 | Crystal Structure Of Erk2 In Complex With An Inhibi | 3e-09 | ||
| 3sd0_A | 350 | Identification Of A Glycogen Synthase Kinase-3b Inh | 3e-09 | ||
| 3o71_A | 358 | Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length | 3e-09 | ||
| 3zu7_A | 365 | Crystal Structure Of A Designed Selected Ankyrin Re | 3e-09 | ||
| 2z7l_A | 366 | Unphosphorylated Mitogen Activated Protein Kinase E | 3e-09 | ||
| 3c9w_A | 357 | Crystal Structure Of Erk-2 With Hypothemycin Covale | 3e-09 | ||
| 2fys_B | 364 | Crystal Structure Of Erk2 Complex With Kim Peptide | 3e-09 | ||
| 3ama_A | 351 | Protein Kinase A Sixfold Mutant Model Of Aurora B W | 3e-09 | ||
| 3kn5_A | 325 | Crystal Structure Of The C-Terminal Kinase Domain O | 3e-09 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 3e-09 | ||
| 3r63_A | 358 | Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | 3e-09 | ||
| 4dit_A | 382 | Crystal Structure Of Gsk3beta In Complex With A Imi | 4e-09 | ||
| 3zuv_A | 364 | Crystal Structure Of A Designed Selected Ankyrin Re | 4e-09 | ||
| 2erk_A | 365 | Phosphorylated Map Kinase Erk2 Length = 365 | 4e-09 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 4e-09 | ||
| 4afj_A | 367 | 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec | 4e-09 | ||
| 2gph_A | 364 | Docking Motif Interactions In The Map Kinase Erk2 L | 4e-09 | ||
| 3kk9_A | 282 | Camkii Substrate Complex B Length = 282 | 5e-09 | ||
| 1gng_A | 378 | Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With | 5e-09 | ||
| 3zrk_A | 371 | Identification Of 2-(4-Pyridyl)thienopyridinones As | 5e-09 | ||
| 3p23_A | 432 | Crystal Structure Of The Human Kinase And Rnase Dom | 5e-09 | ||
| 3agm_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 5e-09 | ||
| 3bhh_A | 295 | Crystal Structure Of Human Calcium/calmodulin-depen | 5e-09 | ||
| 3nx8_A | 351 | Human Camp Dependent Protein Kinase In Complex With | 5e-09 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 5e-09 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 6e-09 | ||
| 4ae6_A | 343 | Structure And Function Of The Human Sperm-specific | 6e-09 | ||
| 3agl_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 6e-09 | ||
| 4fux_A | 360 | Crystal Structure Of The Erk2 Complexed With E75 Le | 6e-09 | ||
| 1xh9_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 6e-09 | ||
| 1gol_A | 364 | Coordinates Of Rat Map Kinase Erk2 With An Arginine | 6e-09 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 6e-09 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 6e-09 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 6e-09 | ||
| 4fv6_A | 360 | Crystal Structure Of The Erk2 Complexed With E57 Le | 6e-09 | ||
| 2y9q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 6e-09 | ||
| 3mvj_A | 371 | Human Cyclic Amp-Dependent Protein Kinase Pka Inhib | 6e-09 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 7e-09 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 7e-09 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 7e-09 | ||
| 4ae9_A | 343 | Structure And Function Of The Human Sperm-specific | 7e-09 | ||
| 1wzy_A | 368 | Crystal Structure Of Human Erk2 Complexed With A Py | 7e-09 | ||
| 1tvo_A | 368 | The Structure Of Erk2 In Complex With A Small Molec | 7e-09 | ||
| 3gb2_A | 353 | Gsk3beta Inhibitor Complex Length = 353 | 7e-09 | ||
| 4fv7_A | 360 | Crystal Structure Of The Erk2 Complexed With E94 Le | 7e-09 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 7e-09 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 7e-09 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 8e-09 | ||
| 3zdi_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 8e-09 | ||
| 3f7z_A | 350 | X-ray Co-crystal Structure Of Glycogen Synthase Kin | 8e-09 | ||
| 3sa0_A | 360 | Complex Of Erk2 With Norathyriol Length = 360 | 8e-09 | ||
| 2ow3_A | 352 | Glycogen Synthase Kinase-3 Beta In Complex With Bis | 8e-09 | ||
| 2ojg_A | 380 | Crystal Structure Of Erk2 In Complex With N,n-dimet | 8e-09 | ||
| 1h8f_A | 352 | Glycogen Synthase Kinase 3 Beta. Length = 352 | 1e-08 | ||
| 3sdj_A | 448 | Structure Of Rnase-Inactive Point Mutant Of Oligome | 1e-08 | ||
| 1uv5_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With 6-Br | 1e-08 | ||
| 1q61_A | 350 | Pka Triple Mutant Model Of Pkb Length = 350 | 1e-08 | ||
| 2jdt_A | 351 | Structure Of Pka-Pkb Chimera Complexed With Isoquin | 1e-08 | ||
| 3f88_A | 349 | Glycogen Synthase Kinase 3beta Inhibitor Complex Le | 1e-08 | ||
| 2vo0_A | 351 | Structure Of Pka-Pkb Chimera Complexed With C-(4-(4 | 1e-08 | ||
| 2gnj_A | 350 | Pka Three Fold Mutant Model Of Rho-Kinase With Y-27 | 1e-08 | ||
| 2jam_A | 304 | Crystal Structure Of Human Calmodulin-Dependent Pro | 1e-08 | ||
| 3fbv_A | 448 | Crystal Structure Of The Oligomer Formed By The Kin | 1e-08 | ||
| 2w4o_A | 349 | Crystal Structure Of Human Camk4 In Complex With 4- | 1e-08 | ||
| 1ua2_A | 346 | Crystal Structure Of Human Cdk7 Length = 346 | 1e-08 | ||
| 2uvy_A | 351 | Structure Of Pka-pkb Chimera Complexed With Methyl- | 1e-08 | ||
| 1szm_A | 350 | Dual Binding Mode Of Bisindolylmaleimide 2 To Prote | 1e-08 | ||
| 2gnf_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 2e-08 | ||
| 1smh_A | 350 | Protein Kinase A Variant Complex With Completely Or | 2e-08 | ||
| 2gng_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 2e-08 | ||
| 1u5q_A | 348 | Crystal Structure Of The Tao2 Kinase Domain: Activa | 2e-08 | ||
| 2rio_A | 434 | Structure Of The Dual Enzyme Ire1 Reveals The Basis | 2e-08 | ||
| 3d5u_A | 317 | Crystal Structure Of A Wildtype Polo-Like Kinase 1 | 2e-08 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 2e-08 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 2e-08 | ||
| 3gbz_A | 329 | Structure Of The Cmgc Cdk Kinase From Giardia Lambl | 2e-08 | ||
| 3hko_A | 345 | Crystal Structure Of A Cdpk Kinase Domain From Cryp | 2e-08 | ||
| 3d5v_A | 317 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 2e-08 | ||
| 3d5w_A | 317 | Crystal Structure Of A Phosphorylated Polo-Like Kin | 2e-08 | ||
| 1cdk_A | 350 | Camp-Dependent Protein Kinase Catalytic Subunit (E. | 2e-08 | ||
| 1ctp_E | 350 | Structure Of The Mammalian Catalytic Subunit Of Cam | 2e-08 | ||
| 1cmk_E | 350 | Crystal Structures Of The Myristylated Catalytic Su | 2e-08 | ||
| 1pme_A | 380 | Structure Of Penta Mutant Human Erk2 Map Kinase Com | 3e-08 | ||
| 2f7e_E | 351 | Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu | 3e-08 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 3e-08 | ||
| 3db6_A | 301 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 3e-08 | ||
| 2c1a_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 3e-08 | ||
| 1svh_A | 350 | Crystal Structure Of Protein Kinase A In Complex Wi | 3e-08 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 3e-08 | ||
| 2uzt_A | 336 | Pka Structures Of Akt, Indazole-Pyridine Inhibitors | 3e-08 | ||
| 2gcd_A | 309 | Tao2 Kinase Domain-Staurosporine Structure Length = | 3e-08 | ||
| 1q24_A | 350 | Pka Double Mutant Model Of Pkb In Complex With Mgat | 3e-08 | ||
| 3dnd_A | 350 | Camp-Dependent Protein Kinase Pka Catalytic Subunit | 3e-08 | ||
| 2r5t_A | 373 | Crystal Structure Of Inactive Serum And Glucocortic | 3e-08 | ||
| 1o9u_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 3e-08 | ||
| 4e7w_A | 394 | Structure Of Gsk3 From Ustilago Maydis Length = 394 | 3e-08 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 3e-08 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 3e-08 | ||
| 4h3q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 3e-08 | ||
| 1stc_E | 350 | Camp-Dependent Protein Kinase, Alpha-Catalytic Subu | 3e-08 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 3e-08 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 3e-08 | ||
| 2jds_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 3e-08 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 4e-08 | ||
| 1q8w_A | 350 | The Catalytic Subunit Of Camp-Dependent Protein Kin | 4e-08 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 4e-08 | ||
| 1xh7_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 4e-08 | ||
| 3tei_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 4e-08 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 4e-08 | ||
| 3mfr_A | 351 | Cask-4m Cam Kinase Domain, Native Length = 351 | 4e-08 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 5e-08 | ||
| 3lj0_A | 434 | Ire1 Complexed With Adp And Quercetin Length = 434 | 5e-08 | ||
| 3uto_A | 573 | Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin- | 5e-08 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 6e-08 | ||
| 3com_A | 314 | Crystal Structure Of Mst1 Kinase Length = 314 | 6e-08 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 6e-08 | ||
| 1s9i_A | 354 | X-Ray Structure Of The Human Mitogen-Activated Prot | 7e-08 | ||
| 2y4i_C | 395 | Ksr2-Mek1 Heterodimer Length = 395 | 8e-08 | ||
| 1koa_A | 491 | Twitchin Kinase Fragment (C.Elegans), Autoregulated | 9e-08 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 1e-07 | ||
| 3fhi_A | 350 | Crystal Structure Of A Complex Between The Catalyti | 1e-07 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 1e-07 | ||
| 3ll6_A | 337 | Crystal Structure Of The Human Cyclin G Associated | 1e-07 | ||
| 2c30_A | 321 | Crystal Structure Of The Human P21-Activated Kinase | 1e-07 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 1e-07 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 1e-07 | ||
| 1s9j_A | 341 | X-Ray Structure Of The Human Mitogen-Activated Prot | 2e-07 | ||
| 2wtk_C | 305 | Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2 | 2e-07 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 2e-07 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 2e-07 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 2e-07 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 2e-07 | ||
| 2p55_A | 333 | X-Ray Structure Of The Human Mitogen-Activated Prot | 2e-07 | ||
| 3mbl_A | 328 | Crystal Structure Of The Human Mitogen-Activated Pr | 2e-07 | ||
| 3dv3_A | 322 | Mek1 With Pf-04622664 Bound Length = 322 | 2e-07 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 2e-07 | ||
| 2qur_A | 350 | Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe | 2e-07 | ||
| 1j3h_A | 350 | Crystal Structure Of Apoenzyme Camp-Dependent Prote | 2e-07 | ||
| 1rdq_E | 350 | Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of | 2e-07 | ||
| 2erz_E | 351 | Crystal Structure Of C-amp Dependent Kinase (pka) B | 2e-07 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 2e-07 | ||
| 1fmo_E | 350 | Crystal Structure Of A Polyhistidine-Tagged Recombi | 2e-07 | ||
| 3orn_A | 307 | Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In | 2e-07 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 2e-07 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 2e-07 | ||
| 3eqc_A | 360 | X-Ray Structure Of The Human Mitogen-Activated Prot | 2e-07 | ||
| 4dfy_A | 371 | Crystal Structure Of R194a Mutant Of Camp-Dependent | 2e-07 | ||
| 3qal_E | 350 | Crystal Structure Of Arg280ala Mutant Of Catalytic | 2e-07 | ||
| 3o7l_B | 350 | Crystal Structure Of Phospholamban (1-19):pka C-Sub | 2e-07 | ||
| 1bkx_A | 350 | A Binary Complex Of The Catalytic Subunit Of Camp-D | 2e-07 | ||
| 1jbp_E | 350 | Crystal Structure Of The Catalytic Subunit Of Camp- | 2e-07 | ||
| 3qam_E | 350 | Crystal Structure Of Glu208ala Mutant Of Catalytic | 2e-07 | ||
| 2gu8_A | 337 | Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel | 2e-07 | ||
| 1syk_A | 350 | Crystal Structure Of E230q Mutant Of Camp-Dependent | 2e-07 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 2e-07 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 2e-07 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 3e-07 | ||
| 2qcs_A | 350 | A Complex Structure Between The Catalytic And Regul | 3e-07 | ||
| 1mrv_A | 339 | Crystal Structure Of An Inactive Akt2 Kinase Domain | 3e-07 | ||
| 4an2_A | 301 | Crystal Structures Of Human Mek1 With Carboxamide-B | 3e-07 | ||
| 3pvb_A | 345 | Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca | 3e-07 | ||
| 4dg3_E | 371 | Crystal Structure Of R336a Mutant Of Camp-dependent | 3e-07 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 3e-07 | ||
| 1ydt_E | 350 | Structure Of Camp-Dependent Protein Kinase, Alpha-C | 3e-07 | ||
| 1o6l_A | 337 | Crystal Structure Of An Activated Akt/protein Kinas | 3e-07 | ||
| 1l3r_E | 350 | Crystal Structure Of A Transition State Mimic Of Th | 3e-07 | ||
| 1gzn_A | 335 | Structure Of Pkb Kinase Domain Length = 335 | 3e-07 | ||
| 1gzk_A | 315 | Molecular Mechanism For The Regulation Of Protein K | 3e-07 | ||
| 4dfx_E | 350 | Crystal Structure Of Myristoylated K7c Catalytic Su | 3e-07 | ||
| 3e87_A | 335 | Crystal Structures Of The Kinase Domain Of Akt2 In | 3e-07 | ||
| 1o6k_A | 336 | Structure Of Activated Form Of Pkb Kinase Domain S4 | 3e-07 | ||
| 1apm_E | 350 | 2.0 Angstrom Refined Crystal Structure Of The Catal | 3e-07 | ||
| 2jdo_A | 342 | Structure Of Pkb-Beta (Akt2) Complexed With Isoquin | 3e-07 | ||
| 3sls_A | 304 | Crystal Structure Of Human Mek-1 Kinase In Complex | 3e-07 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 4e-07 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 4e-07 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 4e-07 | ||
| 2x4f_A | 373 | The Crystal Structure Of The Human Myosin Light Cha | 4e-07 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 4e-07 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 4e-07 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 4e-07 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 4e-07 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 4e-07 | ||
| 2x7f_A | 326 | Crystal Structure Of The Kinase Domain Of Human Tra | 4e-07 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 4e-07 | ||
| 2rku_A | 294 | Structure Of Plk1 In Complex With Bi2536 Length = 2 | 5e-07 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 5e-07 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 5e-07 | ||
| 2ac5_A | 316 | Structure Of Human Mnk2 Kinase Domain Mutant D228g | 5e-07 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 5e-07 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 6e-07 | ||
| 3lm0_A | 327 | Crystal Structure Of Human SerineTHREONINE KINASE 1 | 7e-07 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 7e-07 | ||
| 2xuu_A | 334 | Crystal Structure Of A Dap-Kinase 1 Mutant Length = | 7e-07 | ||
| 2x0g_A | 334 | X-ray Structure Of A Dap-kinase Calmodulin Complex | 7e-07 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 8e-07 | ||
| 3r1n_A | 317 | Mk3 Kinase Bound To Compound 5b Length = 317 | 8e-07 | ||
| 3fme_A | 290 | Crystal Structure Of Human Mitogen-Activated Protei | 8e-07 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 8e-07 | ||
| 3fhr_A | 336 | High Resolution Crystal Structure Of Mitogen-Activa | 8e-07 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 8e-07 | ||
| 3udb_A | 317 | Crystal Structure Of Snrk2.6 Length = 317 | 8e-07 | ||
| 3gu8_A | 295 | Crystal Structure Of Dapkl93g With N6-Cyclopentylad | 8e-07 | ||
| 1yvj_A | 290 | Crystal Structure Of The Jak3 Kinase Domain In Comp | 1e-06 | ||
| 3rny_A | 346 | Crystal Structure Of Human Rsk1 C-Terminal Kinase D | 1e-06 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 1e-06 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 1e-06 | ||
| 3t8o_A | 543 | Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu | 1e-06 | ||
| 3vn9_A | 340 | Rifined Crystal Structure Of Non-Phosphorylated Map | 1e-06 | ||
| 3c4w_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 1e-06 | ||
| 2w4j_A | 277 | X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | 1e-06 | ||
| 3c4x_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 1e-06 | ||
| 3qc9_A | 543 | Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4 | 1e-06 | ||
| 2w4k_A | 302 | X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | 1e-06 | ||
| 3dfc_B | 295 | Crystal Structure Of A Glycine-Rich Loop Mutant Of | 1e-06 | ||
| 1wvw_A | 278 | Crystal Structures Of Kinase Domain Of Dap Kinase I | 1e-06 | ||
| 2yak_A | 285 | Structure Of Death-Associated Protein Kinase 1 (Dap | 1e-06 | ||
| 2xzs_A | 312 | Death Associated Protein Kinase 1 Residues 1-312 Le | 1e-06 | ||
| 2wnt_A | 330 | Crystal Structure Of The Human Ribosomal Protein S6 | 1e-06 | ||
| 3f5u_A | 295 | Crystal Structure Of The Death Associated Protein K | 1e-06 | ||
| 2y0a_A | 326 | Structure Of Dapk1 Construct Residues 1-304 Length | 1e-06 | ||
| 1ig1_A | 294 | 1.8a X-Ray Structure Of Ternary Complex Of A Cataly | 1e-06 | ||
| 4hvd_A | 314 | Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h | 1e-06 | ||
| 3v8s_A | 410 | Human Rho-Associated Protein Kinase 1 (Rock 1) In C | 2e-06 | ||
| 1p4f_A | 293 | Death Associated Protein Kinase Catalytic Domain Wi | 2e-06 | ||
| 3gu4_A | 295 | Crystal Structure Of Dapkq23v-Amppnp Length = 295 | 2e-06 | ||
| 3lxk_A | 327 | Structural And Thermodynamic Characterization Of Th | 2e-06 | ||
| 2v55_A | 406 | Mechanism Of Multi-site Phosphorylation From A Rock | 2e-06 | ||
| 3pjc_A | 315 | Crystal Structure Of Jak3 Complexed With A Potent A | 2e-06 | ||
| 2dyl_A | 318 | Crystal Structure Of Human Mitogen-Activated Protei | 2e-06 | ||
| 2esm_A | 415 | Crystal Structure Of Rock 1 Bound To Fasudil Length | 2e-06 | ||
| 3uc3_A | 361 | The Crystal Structure Of Snf1-Related Kinase 2.3 Le | 2e-06 | ||
| 2qr8_A | 342 | 2.0a X-ray Structure Of C-terminal Kinase Domain Of | 2e-06 | ||
| 3zuu_A | 362 | The Structure Of Ost1 (D160a, S175d) Kinase In Comp | 2e-06 | ||
| 3aln_A | 327 | Crystal Structure Of Human Non-Phosphorylated Mkk4 | 2e-06 | ||
| 3uc4_A | 362 | The Crystal Structure Of Snf1-Related Kinase 2.6 Le | 3e-06 | ||
| 3ujg_A | 361 | Crystal Structure Of Snrk2.6 In Complex With Hab1 L | 3e-06 | ||
| 1vzo_A | 355 | The Structure Of The N-Terminal Kinase Domain Of Ms | 3e-06 | ||
| 3tac_A | 361 | Crystal Structure Of The Liprin-AlphaCASK COMPLEX L | 3e-06 | ||
| 2ac3_A | 316 | Structure Of Human Mnk2 Kinase Domain Length = 316 | 4e-06 | ||
| 3c0g_A | 351 | Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len | 4e-06 | ||
| 2qg5_A | 294 | Cryptosporidium Parvum Calcium Dependent Protein Ki | 4e-06 | ||
| 3f3z_A | 277 | Crystal Structure Of Cryptosporidium Parvum Calcium | 4e-06 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 4e-06 | ||
| 3a60_A | 327 | Crystal Structure Of Unphosphorylated P70s6k1 (Form | 4e-06 | ||
| 3zut_A | 362 | The Structure Of Ost1 (D160a) Kinase Length = 362 | 4e-06 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 4e-06 | ||
| 2hw6_A | 307 | Crystal Structure Of Mnk1 Catalytic Domain Length = | 5e-06 | ||
| 3a62_A | 327 | Crystal Structure Of Phosphorylated P70s6k1 Length | 5e-06 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 5e-06 | ||
| 3qfv_A | 415 | Mrck Beta In Complex With Tpca-1 Length = 415 | 6e-06 | ||
| 3tku_A | 433 | Mrck Beta In Complex With Fasudil Length = 433 | 6e-06 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 6e-06 | ||
| 3enm_A | 316 | The Structure Of The Map2k Mek6 Reveals An Autoinhi | 6e-06 | ||
| 1phk_A | 298 | Two Structures Of The Catalytic Domain Of Phosphory | 7e-06 | ||
| 2phk_A | 277 | The Crystal Structure Of A Phosphorylase Kinase Pep | 7e-06 | ||
| 4fr4_A | 384 | Crystal Structure Of Human SerineTHREONINE-Protein | 7e-06 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 7e-06 | ||
| 2qr7_A | 342 | 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of | 7e-06 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 7e-06 | ||
| 1kob_A | 387 | Twitchin Kinase Fragment (Aplysia), Autoregulated P | 7e-06 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 8e-06 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 9e-06 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 9e-06 | ||
| 4gv1_A | 340 | Pkb Alpha In Complex With Azd5363 Length = 340 | 9e-06 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 9e-06 | ||
| 3iw4_A | 360 | Crystal Structure Of Pkc Alpha In Complex With Nvp- | 9e-06 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 9e-06 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 1e-05 | ||
| 1ql6_A | 298 | The Catalytic Mechanism Of Phosphorylase Kinase Pro | 1e-05 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 1e-05 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 1e-05 | ||
| 3uib_A | 362 | Map Kinase Lmampk10 From Leishmania Major In Comple | 1e-05 | ||
| 3pg1_A | 362 | Map Kinase Lmampk10 From Leishmania Major (1.95 Ang | 1e-05 | ||
| 3cqu_A | 342 | Crystal Structure Of Akt-1 Complexed With Substrate | 1e-05 | ||
| 2vd5_A | 412 | Structure Of Human Myotonic Dystrophy Protein Kinas | 1e-05 | ||
| 3ka0_A | 320 | Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4 | 1e-05 | ||
| 2ycf_A | 322 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 1e-05 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 1e-05 | ||
| 2w0j_A | 323 | Crystal Structure Of Chk2 In Complex With Nsc 10955 | 1e-05 | ||
| 2cn5_A | 329 | Crystal Structure Of Human Chk2 In Complex With Adp | 1e-05 | ||
| 2ycr_A | 323 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 1e-05 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-05 | ||
| 2xk9_A | 322 | Structural Analysis Of Checkpoint Kinase 2 (Chk2) I | 1e-05 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 2e-05 | ||
| 1kwp_A | 400 | Crystal Structure Of Mapkap2 Length = 400 | 2e-05 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 2e-05 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 2e-05 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 2e-05 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 2e-05 | ||
| 2onl_C | 406 | Crystal Structure Of The P38a-Mapkap Kinase 2 Heter | 2e-05 | ||
| 3i6w_A | 443 | Structure And Activation Mechanism Of The Chk2 Dna- | 2e-05 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 2e-05 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 2e-05 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 2e-05 | ||
| 3r2b_A | 318 | Mk2 Kinase Bound To Compound 5b Length = 318 | 2e-05 | ||
| 3ika_A | 331 | Crystal Structure Of Egfr 696-1022 T790m Mutant Cov | 2e-05 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 2e-05 | ||
| 2jiv_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 2e-05 | ||
| 2oza_A | 356 | Structure Of P38alpha Complex Length = 356 | 2e-05 | ||
| 2uv2_A | 287 | Crystal Structure Of Human Ste20-Like Kinase Bound | 2e-05 | ||
| 2j90_A | 304 | Crystal Structure Of Human Zip Kinase In Complex Wi | 2e-05 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 2e-05 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-05 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 3e-05 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 3e-05 | ||
| 3r2y_A | 319 | Mk2 Kinase Bound To Compound 1 Length = 319 | 3e-05 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 3e-05 | ||
| 3i6u_A | 419 | Structure And Activation Mechanism Of The Chk2 Dna- | 3e-05 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 3e-05 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 3e-05 | ||
| 2p3g_X | 327 | Crystal Structure Of A Pyrrolopyridine Inhibitor Bo | 3e-05 | ||
| 3gok_A | 334 | Binding Site Mapping Of Protein Ligands Length = 33 | 3e-05 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 3e-05 | ||
| 2jbo_A | 326 | Protein Kinase Mk2 In Complex With An Inhibitor (Cr | 3e-05 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 3e-05 | ||
| 3fpm_A | 325 | Crystal Structure Of A Squarate Inhibitor Bound To | 3e-05 | ||
| 2pzy_A | 324 | Structure Of Mk2 Complexed With Compound 76 Length | 3e-05 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 3e-05 | ||
| 3gop_A | 361 | Crystal Structure Of The Egf Receptor Juxtamembrane | 3e-05 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 3e-05 | ||
| 2jiu_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 3e-05 | ||
| 4i24_A | 329 | Structure Of T790m Egfr Kinase Domain Co-crystalliz | 3e-05 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 3e-05 | ||
| 4g5p_A | 330 | Crystal Structure Of Egfr Kinase T790m In Complex W | 4e-05 | ||
| 2jit_A | 327 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 4e-05 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 4e-05 | ||
| 4aw2_A | 437 | Crystal Structure Of Cdc42 Binding Protein Kinase A | 4e-05 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 4e-05 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 4e-05 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 4e-05 | ||
| 2j5e_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 5e-05 | ||
| 2p2h_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 5e-05 | ||
| 2gs2_A | 330 | Crystal Structure Of The Active Egfr Kinase Domain | 5e-05 | ||
| 4i23_A | 329 | Crystal Structure Of The Wild-type Egfr Kinase Doma | 6e-05 | ||
| 4g5j_A | 330 | Crystal Structure Of Egfr Kinase In Complex With Bi | 6e-05 | ||
| 3u6j_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 6e-05 | ||
| 3lzb_A | 327 | Egfr Kinase Domain Complexed With An Imidazo[2,1-B] | 6e-05 | ||
| 3vjo_A | 334 | Crystal Structure Of The Wild-Type Egfr Kinase Doma | 6e-05 | ||
| 2gs7_A | 330 | Crystal Structure Of The Inactive Egfr Kinase Domai | 6e-05 | ||
| 2j5f_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 6e-05 | ||
| 3ewh_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 6e-05 | ||
| 1m14_A | 333 | Tyrosine Kinase Domain From Epidermal Growth Factor | 6e-05 | ||
| 4hjo_A | 337 | Crystal Structure Of The Inactive Egfr Tyrosine Kin | 6e-05 | ||
| 3rgf_A | 405 | Crystal Structure Of Human Cdk8CYCC Length = 405 | 6e-05 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 7e-05 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 8e-05 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 8e-05 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 8e-05 | ||
| 1xkk_A | 352 | Egfr Kinase Domain Complexed With A Quinazoline Inh | 8e-05 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 8e-05 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 8e-05 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 8e-05 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 8e-05 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 8e-05 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 8e-05 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 9e-05 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 9e-05 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 9e-05 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 9e-05 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 9e-05 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 9e-05 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 9e-05 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 9e-05 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 9e-05 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 9e-05 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 1e-04 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 1e-04 | ||
| 1yhs_A | 273 | Crystal Structure Of Pim-1 Bound To Staurosporine L | 1e-04 | ||
| 3r00_A | 299 | The Discovery Of Novel Benzofuran-2-Carboxylic Acid | 1e-04 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 1e-04 | ||
| 3cxw_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 1e-04 | ||
| 2rfd_A | 324 | Crystal Structure Of The Complex Between The Egfr K | 1e-04 | ||
| 4alu_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 1e-04 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 1e-04 | ||
| 3jpv_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 1e-04 | ||
| 1xqz_A | 300 | Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut | 1e-04 | ||
| 3uix_A | 298 | Crystal Structure Of Pim1 Kinase In Complex With Sm | 1e-04 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 1e-04 | ||
| 1xws_A | 313 | Crystal Structure Of The Human Pim1 Kinase Domain L | 1e-04 | ||
| 4alv_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 1e-04 | ||
| 2bil_B | 313 | The Human Protein Kinase Pim1 In Complex With Its C | 1e-04 | ||
| 3ma3_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 1e-04 | ||
| 3cy3_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 1e-04 | ||
| 2j2i_B | 312 | Crystal Structure Of The Humab Pim1 In Complex With | 1e-04 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 1e-04 | ||
| 2xj0_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-4 Fro | 1e-04 | ||
| 3jxw_A | 294 | Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4- | 1e-04 | ||
| 2bik_B | 313 | Human Pim1 Phosphorylated On Ser261 Length = 313 | 1e-04 | ||
| 1ywv_A | 293 | Crystal Structures Of Proto-Oncogene Kinase Pim1: A | 1e-04 | ||
| 3pp0_A | 338 | Crystal Structure Of The Kinase Domain Of Human Her | 1e-04 | ||
| 3dcv_A | 328 | Crystal Structure Of Human Pim1 Kinase Complexed Wi | 1e-04 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 1e-04 | ||
| 1yxs_A | 293 | Crystal Structure Of Kinase Pim1 With P123m Mutatio | 1e-04 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 1e-04 | ||
| 3f2a_A | 300 | Crystal Structure Of Human Pim-1 In Complex With Da | 1e-04 | ||
| 1ywn_A | 316 | Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p | 1e-04 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 1e-04 | ||
| 3a99_A | 320 | Structure Of Pim-1 Kinase Crystallized In The Prese | 1e-04 | ||
| 2xiy_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-2 Fro | 1e-04 | ||
| 2obj_A | 333 | Crystal Structure Of Human Pim-1 Kinase In Complex | 1e-04 | ||
| 2xix_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-1 Fro | 1e-04 | ||
| 2zv2_A | 298 | Crystal Structure Of Human CalciumCALMODULIN-Depend | 1e-04 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 1e-04 | ||
| 1vr2_A | 316 | Human Vascular Endothelial Growth Factor Receptor 2 | 1e-04 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 1e-04 | ||
| 4dtk_A | 276 | Novel And Selective Pan-Pim Kinase Inhibitor Length | 1e-04 | ||
| 4agc_A | 353 | Crystal Structure Of Vegfr2 (Juxtamembrane And Kina | 1e-04 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 1e-04 | ||
| 4a7c_A | 308 | Crystal Structure Of Pim1 Kinase With Etp46546 Leng | 1e-04 | ||
| 3c4e_A | 273 | Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7 | 1e-04 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 1e-04 | ||
| 2xir_A | 316 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 1e-04 | ||
| 4as0_A | 273 | Cyclometalated Phthalimides As Protein Kinase Inhib | 1e-04 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 1e-04 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 1e-04 | ||
| 2ya9_A | 361 | Crystal Structure Of The Autoinhibited Form Of Mous | 1e-04 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 1e-04 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 1e-04 | ||
| 2a27_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 1e-04 | ||
| 3fpq_A | 290 | Crystal Structure Of The Kinase Domain Of Wnk1 Leng | 1e-04 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 1e-04 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 1e-04 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 1e-04 | ||
| 3bhy_A | 283 | Crystal Structure Of Human Death Associated Protein | 1e-04 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 1e-04 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 2e-04 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 2e-04 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 2e-04 | ||
| 3qa8_A | 676 | Crystal Structure Of Inhibitor Of Kappa B Kinase Be | 2e-04 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 2e-04 | ||
| 1zws_A | 288 | Crystal Structure Of The Catalytic Domain Of Human | 2e-04 | ||
| 1z9x_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 2e-04 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 2e-04 | ||
| 3rzf_A | 677 | Crystal Structure Of Inhibitor Of Kappab Kinase Bet | 2e-04 | ||
| 2p2i_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 2e-04 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 2e-04 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 2e-04 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 2e-04 | ||
| 2a2a_A | 321 | High-resolution Crystallographic Analysis Of The Au | 2e-04 | ||
| 1wmk_A | 321 | Human Death-Associated Kinase Drp-1, Mutant S308d D | 2e-04 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 2e-04 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 2e-04 | ||
| 4hzr_A | 277 | Crystal Structure Of Ack1 Kinase Domain Length = 27 | 2e-04 | ||
| 3ug1_A | 334 | Crystal Structure Of The Mutated Egfr Kinase Domain | 2e-04 | ||
| 4hzs_A | 341 | Crystal Structure Of Ack1 Kinase Domain With C-term | 2e-04 | ||
| 1yrp_A | 278 | Catalytic Domain Of Human Zip Kinase Phosphorylated | 2e-04 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 2e-04 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 2e-04 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 2e-04 | ||
| 1u54_A | 291 | Crystal Structures Of The Phosphorylated And Unphos | 2e-04 | ||
| 3eqp_B | 276 | Crystal Structure Of Ack1 With Compound T95 Length | 2e-04 | ||
| 4i21_A | 329 | Crystal Structure Of L858r + T790m Egfr Kinase Doma | 2e-04 | ||
| 1u46_A | 291 | Crystal Structure Of The Unphosphorylated Kinase Do | 2e-04 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 2e-04 | ||
| 2jkk_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 2e-04 | ||
| 4id7_A | 273 | Ack1 Kinase In Complex With The Inhibitor Cis-3-[8- | 2e-04 | ||
| 4i1z_A | 329 | Crystal Structure Of The Monomeric (v948r) Form Of | 2e-04 | ||
| 4ewh_B | 275 | Co-Crystal Structure Of Ack1 With Inhibitor Length | 2e-04 | ||
| 3w2o_A | 331 | Egfr Kinase Domain T790m/l858r Mutant With Tak-285 | 2e-04 | ||
| 3vnt_A | 318 | Crystal Structure Of The Kinase Domain Of Human Veg | 2e-04 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 2e-04 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 2e-04 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 2e-04 | ||
| 2j0k_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 3e-04 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 3e-04 | ||
| 4euu_A | 319 | Structure Of Bx-795 Complexed With Human Tbk1 Kinas | 3e-04 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 3e-04 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 3e-04 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 3e-04 | ||
| 1nxk_A | 400 | Crystal Structure Of Staurosporine Bound To Map Kap | 3e-04 | ||
| 2eb3_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (L8 | 3e-04 | ||
| 2itn_A | 327 | Crystal Structure Of Egfr Kinase Domain G719s Mutat | 3e-04 | ||
| 2eb2_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (G7 | 4e-04 | ||
| 3bel_A | 315 | X-Ray Structure Of Egfr In Complex With Oxime Inhib | 4e-04 | ||
| 4i20_A | 329 | Crystal Structure Of Monomeric (v948r) Primary Onco | 4e-04 | ||
| 2itt_A | 327 | Crystal Structure Of Egfr Kinase Domain L858r Mutat | 4e-04 | ||
| 2j0l_A | 276 | Crystal Structure Of A The Active Conformation Of T | 4e-04 | ||
| 4eut_A | 396 | Structure Of Bx-795 Complexed With Unphosphorylated | 4e-04 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 4e-04 | ||
| 3c7q_A | 316 | Structure Of Vegfr2 Kinase Domain In Complex With B | 4e-04 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 5e-04 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 5e-04 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 5e-04 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 5e-04 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 6e-04 | ||
| 4dgl_C | 335 | Crystal Structure Of The Ck2 Tetrameric Holoenzyme | 6e-04 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 6e-04 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 6e-04 | ||
| 2i0e_A | 353 | Structure Of Catalytic Domain Of Human Protein Kina | 6e-04 | ||
| 2y4i_B | 319 | Ksr2-Mek1 Heterodimer Length = 319 | 6e-04 | ||
| 2ebm_A | 128 | Solution Structure Of The Rwd Domain Of Human Rwd D | 6e-04 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 7e-04 | ||
| 1zrz_A | 364 | Crystal Structure Of The Catalytic Domain Of Atypic | 9e-04 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 9e-04 |
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303 | Back alignment and structure |
|
| >pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332 | Back alignment and structure |
|
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
| >pdb|4G84|A Chain A, Crystal Structure Of Human Hisrs Length = 464 | Back alignment and structure |
|
| >pdb|4G85|A Chain A, Crystal Structure Of Human Hisrs Length = 517 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311 | Back alignment and structure |
|
| >pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484 | Back alignment and structure |
|
| >pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298 | Back alignment and structure |
|
| >pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507 | Back alignment and structure |
|
| >pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508 | Back alignment and structure |
|
| >pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484 | Back alignment and structure |
|
| >pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279 | Back alignment and structure |
|
| >pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279 | Back alignment and structure |
|
| >pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292 | Back alignment and structure |
|
| >pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279 | Back alignment and structure |
|
| >pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297 | Back alignment and structure |
|
| >pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289 | Back alignment and structure |
|
| >pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295 | Back alignment and structure |
|
| >pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276 | Back alignment and structure |
|
| >pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287 | Back alignment and structure |
|
| >pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286 | Back alignment and structure |
|
| >pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278 | Back alignment and structure |
|
| >pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268 | Back alignment and structure |
|
| >pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273 | Back alignment and structure |
|
| >pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271 | Back alignment and structure |
|
| >pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269 | Back alignment and structure |
|
| >pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269 | Back alignment and structure |
|
| >pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383 | Back alignment and structure |
|
| >pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320 | Back alignment and structure |
|
| >pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353 | Back alignment and structure |
|
| >pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287 | Back alignment and structure |
|
| >pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287 | Back alignment and structure |
|
| >pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285 | Back alignment and structure |
|
| >pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464 | Back alignment and structure |
|
| >pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367 | Back alignment and structure |
|
| >pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348 | Back alignment and structure |
|
| >pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | Back alignment and structure |
|
| >pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423 | Back alignment and structure |
|
| >pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348 | Back alignment and structure |
|
| >pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364 | Back alignment and structure |
|
| >pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429 | Back alignment and structure |
|
| >pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355 | Back alignment and structure |
|
| >pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360 | Back alignment and structure |
|
| >pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504 | Back alignment and structure |
|
| >pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366 | Back alignment and structure |
|
| >pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380 | Back alignment and structure |
|
| >pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379 | Back alignment and structure |
|
| >pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360 | Back alignment and structure |
|
| >pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353 | Back alignment and structure |
|
| >pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327 | Back alignment and structure |
|
| >pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379 | Back alignment and structure |
|
| >pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370 | Back alignment and structure |
|
| >pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369 | Back alignment and structure |
|
| >pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369 | Back alignment and structure |
|
| >pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348 | Back alignment and structure |
|
| >pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367 | Back alignment and structure |
|
| >pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370 | Back alignment and structure |
|
| >pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348 | Back alignment and structure |
|
| >pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371 | Back alignment and structure |
|
| >pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365 | Back alignment and structure |
|
| >pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354 | Back alignment and structure |
|
| >pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386 | Back alignment and structure |
|
| >pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364 | Back alignment and structure |
|
| >pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372 | Back alignment and structure |
|
| >pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367 | Back alignment and structure |
|
| >pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366 | Back alignment and structure |
|
| >pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310 | Back alignment and structure |
|
| >pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360 | Back alignment and structure |
|
| >pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370 | Back alignment and structure |
|
| >pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362 | Back alignment and structure |
|
| >pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379 | Back alignment and structure |
|
| >pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360 | Back alignment and structure |
|
| >pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354 | Back alignment and structure |
|
| >pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336 | Back alignment and structure |
|
| >pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362 | Back alignment and structure |
|
| >pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365 | Back alignment and structure |
|
| >pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362 | Back alignment and structure |
|
| >pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372 | Back alignment and structure |
|
| >pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348 | Back alignment and structure |
|
| >pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359 | Back alignment and structure |
|
| >pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351 | Back alignment and structure |
|
| >pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350 | Back alignment and structure |
|
| >pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366 | Back alignment and structure |
|
| >pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358 | Back alignment and structure |
|
| >pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284 | Back alignment and structure |
|
| >pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355 | Back alignment and structure |
|
| >pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327 | Back alignment and structure |
|
| >pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334 | Back alignment and structure |
|
| >pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335 | Back alignment and structure |
|
| >pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331 | Back alignment and structure |
|
| >pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373 | Back alignment and structure |
|
| >pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420 | Back alignment and structure |
|
| >pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | Back alignment and structure |
|
| >pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351 | Back alignment and structure |
|
| >pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351 | Back alignment and structure |
|
| >pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430 | Back alignment and structure |
|
| >pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360 | Back alignment and structure |
|
| >pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350 | Back alignment and structure |
|
| >pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358 | Back alignment and structure |
|
| >pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366 | Back alignment and structure |
|
| >pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357 | Back alignment and structure |
|
| >pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364 | Back alignment and structure |
|
| >pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351 | Back alignment and structure |
|
| >pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | Back alignment and structure |
|
| >pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382 | Back alignment and structure |
|
| >pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367 | Back alignment and structure |
|
| >pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282 | Back alignment and structure |
|
| >pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378 | Back alignment and structure |
|
| >pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371 | Back alignment and structure |
|
| >pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432 | Back alignment and structure |
|
| >pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351 | Back alignment and structure |
|
| >pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295 | Back alignment and structure |
|
| >pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351 | Back alignment and structure |
|
| >pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360 | Back alignment and structure |
|
| >pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360 | Back alignment and structure |
|
| >pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368 | Back alignment and structure |
|
| >pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368 | Back alignment and structure |
|
| >pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353 | Back alignment and structure |
|
| >pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350 | Back alignment and structure |
|
| >pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350 | Back alignment and structure |
|
| >pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360 | Back alignment and structure |
|
| >pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352 | Back alignment and structure |
|
| >pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352 | Back alignment and structure |
|
| >pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350 | Back alignment and structure |
|
| >pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350 | Back alignment and structure |
|
| >pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351 | Back alignment and structure |
|
| >pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349 | Back alignment and structure |
|
| >pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351 | Back alignment and structure |
|
| >pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350 | Back alignment and structure |
|
| >pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304 | Back alignment and structure |
|
| >pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349 | Back alignment and structure |
|
| >pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346 | Back alignment and structure |
|
| >pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351 | Back alignment and structure |
|
| >pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350 | Back alignment and structure |
|
| >pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350 | Back alignment and structure |
|
| >pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350 | Back alignment and structure |
|
| >pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348 | Back alignment and structure |
|
| >pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434 | Back alignment and structure |
|
| >pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329 | Back alignment and structure |
|
| >pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345 | Back alignment and structure |
|
| >pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317 | Back alignment and structure |
|
| >pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317 | Back alignment and structure |
|
| >pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350 | Back alignment and structure |
|
| >pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350 | Back alignment and structure |
|
| >pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350 | Back alignment and structure |
|
| >pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301 | Back alignment and structure |
|
| >pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351 | Back alignment and structure |
|
| >pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336 | Back alignment and structure |
|
| >pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309 | Back alignment and structure |
|
| >pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350 | Back alignment and structure |
|
| >pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350 | Back alignment and structure |
|
| >pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373 | Back alignment and structure |
|
| >pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350 | Back alignment and structure |
|
| >pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434 | Back alignment and structure |
|
| >pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354 | Back alignment and structure |
|
| >pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395 | Back alignment and structure |
|
| >pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337 | Back alignment and structure |
|
| >pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341 | Back alignment and structure |
|
| >pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333 | Back alignment and structure |
|
| >pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328 | Back alignment and structure |
|
| >pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350 | Back alignment and structure |
|
| >pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350 | Back alignment and structure |
|
| >pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360 | Back alignment and structure |
|
| >pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371 | Back alignment and structure |
|
| >pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350 | Back alignment and structure |
|
| >pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350 | Back alignment and structure |
|
| >pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337 | Back alignment and structure |
|
| >pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350 | Back alignment and structure |
|
| >pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339 | Back alignment and structure |
|
| >pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301 | Back alignment and structure |
|
| >pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345 | Back alignment and structure |
|
| >pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350 | Back alignment and structure |
|
| >pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337 | Back alignment and structure |
|
| >pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335 | Back alignment and structure |
|
| >pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315 | Back alignment and structure |
|
| >pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350 | Back alignment and structure |
|
| >pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335 | Back alignment and structure |
|
| >pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336 | Back alignment and structure |
|
| >pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342 | Back alignment and structure |
|
| >pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334 | Back alignment and structure |
|
| >pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317 | Back alignment and structure |
|
| >pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317 | Back alignment and structure |
|
| >pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295 | Back alignment and structure |
|
| >pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290 | Back alignment and structure |
|
| >pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543 | Back alignment and structure |
|
| >pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340 | Back alignment and structure |
|
| >pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543 | Back alignment and structure |
|
| >pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | Back alignment and structure |
|
| >pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543 | Back alignment and structure |
|
| >pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543 | Back alignment and structure |
|
| >pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | Back alignment and structure |
|
| >pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278 | Back alignment and structure |
|
| >pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285 | Back alignment and structure |
|
| >pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312 | Back alignment and structure |
|
| >pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330 | Back alignment and structure |
|
| >pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295 | Back alignment and structure |
|
| >pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326 | Back alignment and structure |
|
| >pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294 | Back alignment and structure |
|
| >pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314 | Back alignment and structure |
|
| >pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410 | Back alignment and structure |
|
| >pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327 | Back alignment and structure |
|
| >pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406 | Back alignment and structure |
|
| >pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315 | Back alignment and structure |
|
| >pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318 | Back alignment and structure |
|
| >pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415 | Back alignment and structure |
|
| >pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361 | Back alignment and structure |
|
| >pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342 | Back alignment and structure |
|
| >pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362 | Back alignment and structure |
|
| >pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362 | Back alignment and structure |
|
| >pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361 | Back alignment and structure |
|
| >pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355 | Back alignment and structure |
|
| >pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361 | Back alignment and structure |
|
| >pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351 | Back alignment and structure |
|
| >pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294 | Back alignment and structure |
|
| >pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327 | Back alignment and structure |
|
| >pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307 | Back alignment and structure |
|
| >pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415 | Back alignment and structure |
|
| >pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316 | Back alignment and structure |
|
| >pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298 | Back alignment and structure |
|
| >pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277 | Back alignment and structure |
|
| >pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362 | Back alignment and structure |
|
| >pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362 | Back alignment and structure |
|
| >pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342 | Back alignment and structure |
|
| >pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412 | Back alignment and structure |
|
| >pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320 | Back alignment and structure |
|
| >pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323 | Back alignment and structure |
|
| >pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329 | Back alignment and structure |
|
| >pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406 | Back alignment and structure |
|
| >pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318 | Back alignment and structure |
|
| >pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328 | Back alignment and structure |
|
| >pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356 | Back alignment and structure |
|
| >pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327 | Back alignment and structure |
|
| >pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325 | Back alignment and structure |
|
| >pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328 | Back alignment and structure |
|
| >pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327 | Back alignment and structure |
|
| >pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330 | Back alignment and structure |
|
| >pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329 | Back alignment and structure |
|
| >pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327 | Back alignment and structure |
|
| >pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330 | Back alignment and structure |
|
| >pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327 | Back alignment and structure |
|
| >pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333 | Back alignment and structure |
|
| >pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337 | Back alignment and structure |
|
| >pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273 | Back alignment and structure |
|
| >pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314 | Back alignment and structure |
|
| >pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324 | Back alignment and structure |
|
| >pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313 | Back alignment and structure |
|
| >pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300 | Back alignment and structure |
|
| >pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313 | Back alignment and structure |
|
| >pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313 | Back alignment and structure |
|
| >pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313 | Back alignment and structure |
|
| >pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314 | Back alignment and structure |
|
| >pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294 | Back alignment and structure |
|
| >pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313 | Back alignment and structure |
|
| >pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293 | Back alignment and structure |
|
| >pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338 | Back alignment and structure |
|
| >pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300 | Back alignment and structure |
|
| >pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320 | Back alignment and structure |
|
| >pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308 | Back alignment and structure |
|
| >pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316 | Back alignment and structure |
|
| >pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288 | Back alignment and structure |
|
| >pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677 | Back alignment and structure |
|
| >pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321 | Back alignment and structure |
|
| >pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277 | Back alignment and structure |
|
| >pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334 | Back alignment and structure |
|
| >pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341 | Back alignment and structure |
|
| >pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291 | Back alignment and structure |
|
| >pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276 | Back alignment and structure |
|
| >pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329 | Back alignment and structure |
|
| >pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273 | Back alignment and structure |
|
| >pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329 | Back alignment and structure |
|
| >pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331 | Back alignment and structure |
|
| >pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400 | Back alignment and structure |
|
| >pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334 | Back alignment and structure |
|
| >pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315 | Back alignment and structure |
|
| >pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329 | Back alignment and structure |
|
| >pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327 | Back alignment and structure |
|
| >pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276 | Back alignment and structure |
|
| >pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353 | Back alignment and structure |
|
| >pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319 | Back alignment and structure |
|
| >pdb|2EBM|A Chain A, Solution Structure Of The Rwd Domain Of Human Rwd Domain Containing Protein 1 Length = 128 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1196 | |||
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 1e-109 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 1e-105 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 1e-100 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 1e-87 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 7e-68 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 2e-62 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 3e-61 | |
| 4apc_A | 350 | Serine/threonine-protein kinase NEK1; transferase; | 2e-60 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 4e-60 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 3e-57 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 3e-50 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 8e-49 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 1e-48 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 4e-48 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 1e-47 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 2e-47 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 3e-46 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 6e-46 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 2e-45 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 2e-45 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 3e-45 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 3e-45 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 6e-45 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 1e-44 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 2e-44 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 3e-44 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 5e-44 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 1e-43 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 8e-42 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 9e-42 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 1e-41 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 3e-41 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 4e-41 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 5e-41 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 5e-41 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 1e-40 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 3e-40 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 4e-40 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 2e-39 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 5e-39 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 7e-39 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 1e-38 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 2e-38 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 2e-38 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 3e-38 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 3e-38 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 4e-38 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 4e-38 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 6e-38 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 7e-38 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 1e-37 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 1e-37 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 1e-37 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 2e-37 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 2e-37 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 2e-37 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 3e-37 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 5e-37 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 6e-37 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 7e-37 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 9e-37 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 1e-36 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 1e-36 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 2e-36 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 2e-36 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 3e-36 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 3e-36 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 4e-36 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 4e-36 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 4e-36 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 4e-36 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 4e-36 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 4e-36 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 6e-36 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 8e-36 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 2e-35 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 2e-35 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 3e-35 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 4e-35 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 4e-35 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 5e-35 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 6e-35 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 7e-35 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 8e-35 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 1e-34 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 1e-34 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 1e-34 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 1e-34 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 2e-34 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 2e-34 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 4e-34 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 5e-34 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 8e-34 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 1e-33 | |
| 3net_A | 465 | Histidyl-tRNA synthetase; aminoacyl-tRNA synthetas | 5e-33 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 8e-33 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 8e-33 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 1e-32 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 1e-32 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 2e-32 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 2e-32 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 2e-32 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 4e-32 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 4e-32 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 5e-32 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 3e-31 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 3e-31 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 4e-31 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 5e-31 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 7e-31 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 8e-31 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 1e-30 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 1e-30 | |
| 1uu3_A | 310 | HPDK1, 3-phosphoinositide dependent protein kinase | 2e-30 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 2e-30 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 3e-30 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 4e-30 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 6e-30 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 1e-29 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 1e-29 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 3e-29 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 3e-29 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 4e-29 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 4e-29 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 4e-29 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 5e-29 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 1e-28 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 1e-28 | |
| 3lc0_A | 456 | Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-t | 1e-28 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 2e-28 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 2e-28 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 2e-28 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 3e-28 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 4e-28 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 5e-28 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 5e-28 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 8e-28 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 3e-26 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 4e-26 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 5e-26 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 6e-26 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 1e-25 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 2e-25 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 2e-25 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 4e-25 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 4e-25 | |
| 3pvu_A | 695 | Beta-adrenergic receptor kinase 1; transferase, se | 8e-25 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 1e-24 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 2e-24 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 3e-24 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 3e-24 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 7e-24 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 2e-23 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 2e-22 | |
| 3g51_A | 325 | Ribosomal protein S6 kinase alpha-3; N-terminal ki | 2e-22 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 4e-22 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 5e-22 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 8e-22 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 1e-21 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 2e-21 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 3e-21 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 4e-21 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 2e-20 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 3e-20 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 1e-19 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 1e-19 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 2e-19 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 2e-19 | |
| 1wu7_A | 434 | Histidyl-tRNA synthetase; ligase, structural genom | 4e-19 | |
| 3od1_A | 400 | ATP phosphoribosyltransferase regulatory subunit; | 2e-18 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 1e-17 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 2e-17 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 3e-17 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 3e-17 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 4e-17 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 1e-16 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 2e-16 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 1e-15 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 1e-15 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 5e-15 | |
| 3rac_A | 373 | Histidine-tRNA ligase; structural genomics, PSI-bi | 5e-15 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 6e-15 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 2e-14 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 1e-07 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 2e-14 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 3e-14 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 3e-14 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 9e-14 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 1e-13 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 2e-13 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 1e-05 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 2e-13 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 2e-13 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 2e-13 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 3e-06 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 2e-13 | |
| 3v5q_A | 297 | NT-3 growth factor receptor; kinase domain, kinase | 3e-13 | |
| 1usy_A | 275 | ATP phosphoribosyltransferase regulatory subunit; | 4e-13 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 5e-13 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 7e-13 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 9e-13 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 1e-12 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 2e-12 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 2e-12 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 2e-12 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 2e-12 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 2e-12 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 3e-12 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 3e-12 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 3e-12 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 3e-12 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 4e-12 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 4e-12 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 5e-12 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 5e-12 | |
| 1ukx_A | 137 | GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple | 6e-12 | |
| 2ebm_A | 128 | RWD domain-containing protein 1; alpha+beta sandwi | 6e-12 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 7e-12 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 8e-12 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 9e-12 | |
| 3zzw_A | 289 | Tyrosine-protein kinase transmembrane receptor RO; | 1e-11 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 2e-11 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 2e-11 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 2e-11 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 3e-11 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 4e-11 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 4e-11 | |
| 2day_A | 128 | Ring finger protein 25; ligase, metal-binding, UB1 | 5e-11 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 6e-11 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 6e-11 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 8e-11 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 8e-11 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 9e-11 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 1e-10 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 2e-10 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 2e-10 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 2e-10 | |
| 2yz0_A | 138 | Serine/threonine-protein kinase GCN2; A-B-B-B-B-A- | 3e-10 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 3e-10 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 3e-10 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 3e-10 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 5e-10 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 6e-10 | |
| 2ebk_A | 128 | RWD domain-containing protein 3; alpha+beta sandwi | 6e-10 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 1e-09 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 2e-09 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 4e-09 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 5e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 8e-09 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 1e-08 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 2e-04 |
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 344 bits (883), Expect = e-109
Identities = 108/334 (32%), Positives = 181/334 (54%), Gaps = 27/334 (8%)
Query: 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 435
+SRYL DFE +Q +G GGFG V KNK+D +YA+K+IRL ++ ++++REV L+
Sbjct: 1 ASRYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRE-LAREKVMREVKALA 59
Query: 436 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLES--- 492
+L+H +VRY+ AW ET + + S+ + + S D + +
Sbjct: 60 KLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFS 119
Query: 493 --------------TYLYIQMEYCPR-TLRQVFESYDHF---DKELAWHLFRQIVEGLAH 534
YLYIQM+ C + L+ + + H+F QI E +
Sbjct: 120 TKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEF 179
Query: 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 594
+H +G++HRDL P+NIFF + +K+GDFGL + ++ +Q P TGQ
Sbjct: 180 LHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA---THTGQ 236
Query: 595 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPS 654
VGT Y +PE G K D++SLG++ FEL + FST MER +++D++ + P
Sbjct: 237 VGTKLYMSPEQIHGNN-YSHKVDIFSLGLILFELLYSFSTQMERVRIITDVR-NLKFPLL 294
Query: 655 WVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688
+ K+ ++ +++ ++SPSP++RP AT+++++A+
Sbjct: 295 FTQKYPQEHMMVQDMLSPSPTERPEATDIIENAI 328
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 331 bits (852), Expect = e-105
Identities = 130/334 (38%), Positives = 175/334 (52%), Gaps = 36/334 (10%)
Query: 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 435
S RY +DFEE+ LG G FG VV +N LD R+YA+KKIR ++ L IL EV L+
Sbjct: 1 SLRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL---STILSEVMLLA 57
Query: 436 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 495
L HQ+VVRYY AW E V + + L
Sbjct: 58 SLNHQYVVRYYAAWLE---------------------------RRNFVKPMTAVKKKSTL 90
Query: 496 YIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 553
+IQMEYC TL + S + + ++ W LFRQI+E L++IH QGIIHRDL P NIF D
Sbjct: 91 FIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFID 150
Query: 554 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613
++KIGDFGLAK + LD + G S + T +GT Y A E+ G +
Sbjct: 151 ESRNVKIGDFGLAKNVH-RSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYN 209
Query: 614 EKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPS--WVAKFSEQESLLRRLMS 671
EK DMYSLGI+FFE+ +PFST MER +L L+ P K ++ ++R L+
Sbjct: 210 EKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLID 269
Query: 672 PSPSDRPSATELLQDA-LPPQMEYELLDNILRMM 704
P+ RP A LL LP + + E++ L+ +
Sbjct: 270 HDPNKRPGARTLLNSGWLPVKHQDEVIKEALKSL 303
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 318 bits (818), Expect = e-100
Identities = 106/315 (33%), Positives = 168/315 (53%), Gaps = 38/315 (12%)
Query: 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL 437
RYL DFE +Q LG GGFG V KNK+D +YA+K+IRL ++ L ++++REV L++L
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAR-EKVMREVKALAKL 60
Query: 438 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
+H +VRY+ AW E + YLYI
Sbjct: 61 EHPGIVRYFNAWLEKN----------------------------TTEKLQPSSPKVYLYI 92
Query: 498 QMEYCPR-TLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 553
QM+ C + L+ + + ++ + H+F QI E + +H +G++HRDL P+NIFF
Sbjct: 93 QMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFT 152
Query: 554 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613
+ +K+GDFGL + D++ TGQVGT Y +PE G
Sbjct: 153 MDDVVKVGDFGLVTAMD---QDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNS-YS 208
Query: 614 EKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 673
K D++SLG++ FEL +PFST MER L+D++ + PP + K+ + +++ ++SPS
Sbjct: 209 HKVDIFSLGLILFELLYPFSTQMERVRTLTDVR-NLKFPPLFTQKYPCEYVMVQDMLSPS 267
Query: 674 PSDRPSATELLQDAL 688
P +RP A ++++A+
Sbjct: 268 PMERPEAINIIENAV 282
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 284 bits (728), Expect = 1e-87
Identities = 92/313 (29%), Positives = 147/313 (46%), Gaps = 54/313 (17%)
Query: 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR 436
R+ DF+E++ +G GGFG V K+++DG+ Y +K+++ N++ REV L++
Sbjct: 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN------NEKAEREVKALAK 60
Query: 437 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 496
L H ++V Y W + ++ ++ L+
Sbjct: 61 LDHVNIVHYNGCWDGFD------------------------YDPETSSKNSSRSKTKCLF 96
Query: 497 IQMEYCPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 553
IQME+C + TL Q E + DK LA LF QI +G+ +IH + +I+RDL P+NIF
Sbjct: 97 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLV 156
Query: 554 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613
+KIGDFGL L D GT Y +PE
Sbjct: 157 DTKQVKIGDFGLVT-----SLKNDGKRTR-----------SKGTLRYMSPEQISSQD-YG 199
Query: 614 EKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 673
++ D+Y+LG++ EL H TA E +DL+ G + + K +LL++L+S
Sbjct: 200 KEVDLYALGLILAELLHVCDTAFETSKFFTDLR-DGIISDIFDKKEK---TLLQKLLSKK 255
Query: 674 PSDRPSATELLQD 686
P DRP+ +E+L+
Sbjct: 256 PEDRPNTSEILRT 268
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 230 bits (588), Expect = 7e-68
Identities = 100/361 (27%), Positives = 144/361 (39%), Gaps = 76/361 (21%)
Query: 337 SSQFNKTFNQVFHQKM--VSSRVSQFW---KPSVDSGSPNMSLPSSRYLNDFEELQPLGH 391
SS + ++ Q M + R F ++ S + S P S + F+ L LGH
Sbjct: 8 SSGVDLGTENLYFQSMHQLQPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLSRLGH 67
Query: 392 GGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWF 450
G +G V ++K DGR YAVK+ + R L EV + ++ QH VR QAW
Sbjct: 68 GSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWE 127
Query: 451 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVF 510
E G LY+Q E C +L+Q
Sbjct: 128 EGG----------------------------------------ILYLQTELCGPSLQQHC 147
Query: 511 ESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 569
E++ + W R + LAH+H QG++H D+ P NIF R K+GDFGL
Sbjct: 148 EAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLV-- 205
Query: 570 KLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL- 628
+L A Q G Y APE+ QG AD++SLG+ E+
Sbjct: 206 ---ELGTAGAGEV-----------QEGDPRYMAPELLQG--SYGTAADVFSLGLTILEVA 249
Query: 629 ---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELL 684
P +Q+ +G LPP + A S + S+L ++ P P R +A LL
Sbjct: 250 CNMELPHGGEGWQQLR------QGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALL 303
Query: 685 Q 685
Sbjct: 304 A 304
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 214 bits (547), Expect = 2e-62
Identities = 72/356 (20%), Positives = 124/356 (34%), Gaps = 71/356 (19%)
Query: 363 PSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP 422
P L +F + +G G F V LDG A+KK+++ D
Sbjct: 14 PQFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDA 73
Query: 423 VNDR--ILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASS 480
R ++E+ L +L H +V++YY ++ E
Sbjct: 74 -KARADCIKEIDLLKQLNHPNVIKYYASFIEDN--------------------------- 105
Query: 481 ADVTGQENKLESTYLYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535
L I +E R ++ + + W F Q+ L H+
Sbjct: 106 -------------ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 595
H + ++HRD+ P N+F A +K+GD GL + V
Sbjct: 153 HSRRVMHRDIKPANVFITATGVVKLGDLGLGR-----FFSSKTTAAHS----------LV 197
Query: 596 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELP 652
GT +Y +PE + K+D++SLG + +E+ PF L ++ + P
Sbjct: 198 GTPYYMSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYP 256
Query: 653 PSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSS 707
P +SE+ L+ ++P P RP T + + + + L H
Sbjct: 257 PLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDV---AKRMHACTASSLEHHHHH 309
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 210 bits (537), Expect = 3e-61
Identities = 80/347 (23%), Positives = 124/347 (35%), Gaps = 97/347 (27%)
Query: 368 GSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRI 427
G+ M SRY +F EL+ +G G FG V C +LDG YA+K+ +
Sbjct: 1 GAMGMK---SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNA 57
Query: 428 LREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQ 486
LREV + L QH HVVRY+ AW E
Sbjct: 58 LREVYAHAVLGQHSHVVRYFSAWAEDD--------------------------------- 84
Query: 487 ENKLESTYLYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 541
++ IQ EYC + + + +F + L Q+ GL +IH ++
Sbjct: 85 -------HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLV 137
Query: 542 HRDLTPNNIFFDARNDI-------------------KIGDFGLAKFLKLEQLDQDAAFPT 582
H D+ P+NIF + KIGD G + Q+
Sbjct: 138 HMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV-------- 189
Query: 583 DTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQ 639
+ G + A E+ Q KAD+++L + +
Sbjct: 190 -----------EEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWH 238
Query: 640 IVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQ 685
+ ++G LP S++ LL+ ++ P P RPSA L++
Sbjct: 239 EI-----RQGRLPRI-PQVLSQEFTELLKVMIHPDPERRPSAMALVK 279
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 209 bits (535), Expect = 2e-60
Identities = 88/332 (26%), Positives = 142/332 (42%), Gaps = 71/332 (21%)
Query: 362 KPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL 421
VD G+ N+ S + + LQ +G G FG +L K+ DGR Y +K+I + S
Sbjct: 8 SSGVDLGTENLYFQS---MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSS 64
Query: 422 PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSA 481
+ REVA L+ ++H ++V+Y +++
Sbjct: 65 KEREESRREVAVLANMKHPNIVQYRESF-------------------------------- 92
Query: 482 DVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 538
E+ LYI M+YC L + + F ++ F QI L H+H +
Sbjct: 93 --------EENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR 144
Query: 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTY 598
I+HRD+ NIF +++GDFG+A+ L+ +GT
Sbjct: 145 KILHRDIKSQNIFLTKDGTVQLGDFGIAR-----VLNSTVEL-ARA---------CIGTP 189
Query: 599 FYTAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLK-QKGELPPS 654
+Y +PEI + P + K+D+++LG V +EL H F + +V LK G PP
Sbjct: 190 YYLSPEICENKP-YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV---LKIISGSFPP- 244
Query: 655 WVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQ 685
+S SL+ +L +P DRPS +L+
Sbjct: 245 VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 206 bits (527), Expect = 4e-60
Identities = 77/322 (23%), Positives = 137/322 (42%), Gaps = 73/322 (22%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 439
D+E L +G G +G + K DG+ K++ + ++ EV L L+H
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
++VRYY + +T LYI M
Sbjct: 65 PNIVRYYDRIIDR--------------------------------------TNTTLYIVM 86
Query: 500 EYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH-----GQGIIHRDLTPNN 549
EYC + + + + D+E + Q+ L H G ++HRDL P N
Sbjct: 87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN 146
Query: 550 IFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609
+F D + ++K+GDFGLA+ L+ D +F T VGT +Y +PE
Sbjct: 147 VFLDGKQNVKLGDFGLAR-----ILNHDTSF-AKT---------FVGTPYYMSPEQMNRM 191
Query: 610 PKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLK-QKGELPPSWVAKFSEQ-ES 664
+EK+D++SLG + +EL PF+ ++++ K ++G+ ++S++
Sbjct: 192 S-YNEKSDIWSLGCLLYELCALMPPFTAFSQKELA---GKIREGKFRR-IPYRYSDELNE 246
Query: 665 LLRRLMSPSPSDRPSATELLQD 686
++ R+++ RPS E+L++
Sbjct: 247 IITRMLNLKDYHRPSVEEILEN 268
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 199 bits (509), Expect = 3e-57
Identities = 69/350 (19%), Positives = 111/350 (31%), Gaps = 65/350 (18%)
Query: 362 KPSVDSGSPNMSLPSSRY---LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD 418
SG N+ + +Q LG GGF +V L + DG YA+K+I +
Sbjct: 7 HHHHSSGRENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE 66
Query: 419 KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAA 478
+ + RE H +++R
Sbjct: 67 QQ--DREEAQREADMHRLFNHPNILRLVAYCLRE-------------------------- 98
Query: 479 SSADVTGQENKLESTYLYIQMEYCPR-----TLRQVFESYDHFDKELAWHLFRQIVEGLA 533
+ ++ + + R + ++ + + ++ L I GL
Sbjct: 99 ----------RGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLE 148
Query: 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTG 593
IH +G HRDL P NI + D G + A D
Sbjct: 149 AIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQ------DWAA 202
Query: 594 QVGTYFYTAPEIEQGWP--KIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQK 648
Q T Y APE+ IDE+ D++SLG V + + P+ ++ ++ Q
Sbjct: 203 QRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN 262
Query: 649 GELPPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELL------QDALPPQ 691
P + S LL +M+ P RP LL Q P Q
Sbjct: 263 QLSIPQS-PRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQ 311
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 180 bits (458), Expect = 3e-50
Identities = 67/314 (21%), Positives = 121/314 (38%), Gaps = 53/314 (16%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQH 441
+ L GGF V ++ GR YA+K++ ++ N I++EV + +L H +
Sbjct: 30 LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEE--KNRAIIQEVCFMKKLSGHPN 87
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
+V++ S+A + +E+ + E
Sbjct: 88 IVQFC--------------------------------SAASIGKEESDTGQAEFLLLTEL 115
Query: 502 CPRTLRQVFESY---DHFDKELAWHLFRQIVEGLAHIHGQG--IIHRDLTPNNIFFDARN 556
C L + + + +F Q + H+H Q IIHRDL N+ +
Sbjct: 116 CKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQG 175
Query: 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK--IDE 614
IK+ DFG A + D ++ + + + T Y PEI + I E
Sbjct: 176 TIKLCDFGSATTI---SHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGE 232
Query: 615 KADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 671
K D+++LG + + L HPF + +IV P +++ SL+R ++
Sbjct: 233 KQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYS-----IPPHDTQYTVFHSLIRAMLQ 287
Query: 672 PSPSDRPSATELLQ 685
+P +R S E++
Sbjct: 288 VNPEERLSIAEVVH 301
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 179 bits (455), Expect = 8e-49
Identities = 77/317 (24%), Positives = 116/317 (36%), Gaps = 71/317 (22%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQ 440
F LGHG G +V + D R AVK+I + REV L +H
Sbjct: 25 SFCPKDVLGHGAEGTIV-YRGMFDNRDVAVKRILPEC-----FSFADREVQLLRESDEHP 78
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
+V+RY+ + + YI +E
Sbjct: 79 NVIRYFCT-EKD---------------------------------------RQFQYIAIE 98
Query: 501 YCPRTLRQVFESYDHFDKEL-AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND-- 557
C TL++ E D L L +Q GLAH+H I+HRDL P+NI N
Sbjct: 99 LCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHG 158
Query: 558 ---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI-- 612
I DFGL K L + + +G GT + APE+ K
Sbjct: 159 KIKAMISDFGLCKKLAVGRHSFSRR------------SGVPGTEGWIAPEMLSEDCKENP 206
Query: 613 DEKADMYSLGIVFFEL----WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRR 668
D++S G VF+ + HPF +++RQ + + + L+ +
Sbjct: 207 TYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEK 266
Query: 669 LMSPSPSDRPSATELLQ 685
+++ P RPSA +L+
Sbjct: 267 MIAMDPQKRPSAKHVLK 283
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 178 bits (454), Expect = 1e-48
Identities = 86/352 (24%), Positives = 129/352 (36%), Gaps = 90/352 (25%)
Query: 367 SGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR 426
S N+ N + LG+G G VV GR AVK++ L D D
Sbjct: 1 SRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRM-LIDF----CDI 54
Query: 427 ILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTG 485
L E+ L+ H +V+RYY + T
Sbjct: 55 ALMEIKLLTESDDHPNVIRYYCS-ETT--------------------------------- 80
Query: 486 QENKLESTYLYIQMEYCPRTLRQVFESYDHFDKEL-------AWHLFRQIVEGLAHIHGQ 538
+LYI +E C L+ + ES + D+ L L RQI G+AH+H
Sbjct: 81 ------DRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 134
Query: 539 GIIHRDLTPNNIFFDARND-------------IKIGDFGLAKFLKLEQLDQDAAFPTDTG 585
IIHRDL P NI + I I DFGL K L ++F T+
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD----SGQSSFRTNLN 190
Query: 586 GVSVDGTGQVGTYFYTAPEI------EQGWPKIDEKADMYSLGIVFFEL----WHPFS-- 633
GT + APE+ Q ++ D++S+G VF+ + HPF
Sbjct: 191 NP-------SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 243
Query: 634 TAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685
+ E I+ + +E L+ +++ P RP+A ++L+
Sbjct: 244 YSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 176 bits (447), Expect = 4e-48
Identities = 79/436 (18%), Positives = 141/436 (32%), Gaps = 83/436 (19%)
Query: 326 SERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEE 385
L + S + Q M S + D S + + S +
Sbjct: 4 HHHSSGLVPRGSGMKETAAAKFERQHMDSPDLGT---DDDDKASSSANECISVKGRIYSI 60
Query: 386 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH--QHVV 443
L+ +G GG V N+ + YA+K + L++ D E+A L++LQ ++
Sbjct: 61 LKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII 119
Query: 444 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP 503
R Y + T Y+Y+ ME
Sbjct: 120 RLYD-YEIT---------------------------------------DQYIYMVMECGN 139
Query: 504 RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDF 563
L + D ++ ++E + IH GI+H DL P N +K+ DF
Sbjct: 140 IDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDF 198
Query: 564 GLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----------EQGWPKID 613
G+A DT V D QVG Y PE + KI
Sbjct: 199 GIAN-----------QMQPDTTSVVKD--SQVGAVNYMPPEAIKDMSSSRENGKSKSKIS 245
Query: 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 670
K+D++SLG + + + + PF + + L + + + +L+ +
Sbjct: 246 PKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCL 305
Query: 671 SPSPSDRPSATELLQD----------ALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSI 720
P R S ELL + E + +L + + K ++
Sbjct: 306 KRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSILKAAKTL 365
Query: 721 FDEETLDMKHHAGTLR 736
++ + H++ + +
Sbjct: 366 YEHYSGGESHNSSSSK 381
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 172 bits (437), Expect = 1e-47
Identities = 71/340 (20%), Positives = 117/340 (34%), Gaps = 73/340 (21%)
Query: 364 SVDSGSPNMSLPSSRYLN-DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP 422
VD G+ N+ S + L+ +G GG V N+ + YA+K + L++
Sbjct: 10 GVDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQ 68
Query: 423 VNDRILREVATLSRLQH--QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASS 480
D E+A L++LQ ++R Y + T
Sbjct: 69 TLDSYRNEIAYLNKLQQHSDKIIRLYD-YEIT---------------------------- 99
Query: 481 ADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540
Y+Y+ ME L + D ++ ++E + IH GI
Sbjct: 100 -----------DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 148
Query: 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFY 600
+H DL P N +K+ DFG+A + SV QVGT Y
Sbjct: 149 VHSDLKPANFLIV-DGMLKLIDFGIANQM-------------QPDTTSVVKDSQVGTVNY 194
Query: 601 TAPEI----------EQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQ 647
PE + KI K+D++SLG + + + + PF + + L +
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 254
Query: 648 KGELPPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQD 686
+ + +L+ + P R S ELL
Sbjct: 255 PNHEIEFP-DIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 172 bits (438), Expect = 2e-47
Identities = 66/321 (20%), Positives = 110/321 (34%), Gaps = 70/321 (21%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH- 439
+ L+ +G GG V N+ + YA+K + L++ D E+A L++LQ
Sbjct: 9 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 67
Query: 440 -QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
++R Y + T Y+Y+
Sbjct: 68 SDKIIRLYD-YEIT---------------------------------------DQYIYMV 87
Query: 499 MEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
ME L + D ++ ++E + IH GI+H DL P N +
Sbjct: 88 MECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGML 146
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----------EQG 608
K+ DFG+A + SV QVGT Y PE +
Sbjct: 147 KLIDFGIANQM-------------QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKS 193
Query: 609 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESL 665
KI K+D++SLG + + + + PF + + L + + + +
Sbjct: 194 KSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDV 253
Query: 666 LRRLMSPSPSDRPSATELLQD 686
L+ + P R S ELL
Sbjct: 254 LKCCLKRDPKQRISIPELLAH 274
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 173 bits (440), Expect = 3e-46
Identities = 79/350 (22%), Positives = 142/350 (40%), Gaps = 68/350 (19%)
Query: 347 VFHQKMVSSRVSQFWKPSVDSGSPNMSL--PSSRYLNDFEELQPLGHGGFGHVVLCKNKL 404
+ H SS + +P M + ++ ++ LG G +G V+LC++K+
Sbjct: 1 MHHHHHHSSGRENLYFQGDLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKV 60
Query: 405 DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 464
A+K IR S N ++L EVA L L H ++++ Y FE
Sbjct: 61 THVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF-FE------------- 106
Query: 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWH 523
+ Y+ ME L F++ A
Sbjct: 107 --------------------------DKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV 140
Query: 524 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAF 580
+ +Q++ G+ ++H I+HRDL P N+ +++ IKI DFGL+ + ++ ++
Sbjct: 141 IIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER-- 198
Query: 581 PTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAME 637
+GT +Y APE+ + K DEK D++S+G++ F L PF +
Sbjct: 199 --------------LGTAYYIAPEVLRK--KYDEKCDVWSIGVILFILLAGYPPFGGQTD 242
Query: 638 RQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQD 686
++I+ K K SE + L+++++ R SA + L+
Sbjct: 243 QEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 166 bits (422), Expect = 6e-46
Identities = 67/321 (20%), Positives = 114/321 (35%), Gaps = 69/321 (21%)
Query: 375 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATL 434
R+L E+ G G F V + A +++ + + R E L
Sbjct: 23 NDGRFLKFDIEI---GRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEML 79
Query: 435 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 494
LQH ++VR+Y +W T
Sbjct: 80 KGLQHPNIVRFYDSWEST------------------------------------VKGKKC 103
Query: 495 LYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG--IIHRDLTPNNIF 551
+ + E TL+ + + ++ RQI++GL +H + IIHRDL +NIF
Sbjct: 104 IVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIF 163
Query: 552 FDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGW 609
+KIGD GLA + +V +GT + APE E+ +
Sbjct: 164 ITGPTGSVKIGDLGLATLK------------RASFAKAV-----IGTPEFMAPEMYEEKY 206
Query: 610 PKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFS-EQESL 665
DE D+Y+ G+ E+ +P+S + + G P S+ E + +
Sbjct: 207 ---DESVDVYAFGMCMLEMATSEYPYSE-CQNAAQIYRRVTSGVKPASFDKVAIPEVKEI 262
Query: 666 LRRLMSPSPSDRPSATELLQD 686
+ + + +R S +LL
Sbjct: 263 IEGCIRQNKDERYSIKDLLNH 283
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 2e-45
Identities = 72/326 (22%), Positives = 126/326 (38%), Gaps = 78/326 (23%)
Query: 373 SLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREV 431
L R + + LG GGF + +A K + + +++ E+
Sbjct: 7 VLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEI 66
Query: 432 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 491
+ L HQHVV ++ +FE
Sbjct: 67 SIHRSLAHQHVVGFHG-FFED--------------------------------------- 86
Query: 492 STYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 550
+ ++++ +E C R +L ++ + + A + RQIV G ++H +IHRDL N+
Sbjct: 87 NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNL 146
Query: 551 FFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQG 608
F + ++KIGDFGLA +++ D GT Y APE+ ++G
Sbjct: 147 FLNEDLEVKIGDFGLAT-----KVEYDGERKKVLC----------GTPNYIAPEVLSKKG 191
Query: 609 WPKIDEKADMYSLGIVFFEL---WHPFST----AMERQIVLSDLKQKGELP-PSWVAKFS 660
+ D++S+G + + L PF T +I K E P +
Sbjct: 192 H---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK------KNEYSIPKHIN--P 240
Query: 661 EQESLLRRLMSPSPSDRPSATELLQD 686
SL+++++ P+ RP+ ELL D
Sbjct: 241 VAASLIQKMLQTDPTARPTINELLND 266
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 167 bits (424), Expect = 2e-45
Identities = 44/317 (13%), Positives = 88/317 (27%), Gaps = 50/317 (15%)
Query: 388 PLGHGGFGHVVLCKNKLDGRHYAVKKIRL-KDKSLPVNDRILREVATLSRLQHQHVVRYY 446
PL G V L ++ +A+K + + S +R+ +RL +
Sbjct: 69 PLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEAR 128
Query: 447 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTL 506
+D + + S + + D N + M L
Sbjct: 129 DRRRLLLPSD--------AVAVQSQPPFAQLSPGQDDYAVAN------YLLLMPAASVDL 174
Query: 507 RQVFESYDHFDK-------ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
+F + D L Q++ A++ +G++H TP+N+F +
Sbjct: 175 ELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLM 234
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI-EQGWPKIDEKADM 618
+GD V G Y E +
Sbjct: 235 LGDVSALW------------------KVGTRGPASSVPVTYAPREFLNASTATFTHALNA 276
Query: 619 YSLGIVFFELW---HPF-----STAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRL 669
+ LG+ + +W PF + + L + ++L+ R
Sbjct: 277 WQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRF 336
Query: 670 MSPSPSDRPSATELLQD 686
++ R E ++
Sbjct: 337 LNFDRRRRLLPLEAMET 353
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 163 bits (416), Expect = 3e-45
Identities = 76/324 (23%), Positives = 127/324 (39%), Gaps = 76/324 (23%)
Query: 373 SLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK--SLPVNDRILRE 430
S L DFE +PLG G FG+V L + K A+K + K + V ++ RE
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF-KAQLEKAGVEHQLRRE 59
Query: 431 VATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKL 490
V S L+H +++R Y +F
Sbjct: 60 VEIQSHLRHPNILRLYG-YFHD-------------------------------------- 80
Query: 491 ESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 549
+T +Y+ +EY P T+ + + FD++ ++ L++ H + +IHRD+ P N
Sbjct: 81 -ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 139
Query: 550 IFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609
+ + ++KI DFG + + GT Y PE+ +G
Sbjct: 140 LLLGSAGELKIADFGWSVHAPSSRRT------D-----------LCGTLDYLPPEMIEGR 182
Query: 610 PKIDEKADMYSLGIVFFELWH---PFST----AMERQIVLSDLKQKGELPPSWVAKFSEQ 662
DEK D++SLG++ +E PF ++I + P +V
Sbjct: 183 MH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVT--EGA 234
Query: 663 ESLLRRLMSPSPSDRPSATELLQD 686
L+ RL+ +PS RP E+L+
Sbjct: 235 RDLISRLLKHNPSQRPMLREVLEH 258
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 170 bits (432), Expect = 3e-45
Identities = 82/324 (25%), Positives = 141/324 (43%), Gaps = 67/324 (20%)
Query: 372 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN-DRILRE 430
+ ++ + + ++ + LG G FG V+LCK+K+ G+ AVK I + + + +LRE
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 431 VATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKL 490
V L +L H ++++ Y+ FE
Sbjct: 77 VQLLKQLDHPNIMKLYEF-FE--------------------------------------- 96
Query: 491 ESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 549
+ Y Y+ E L S F + A + RQ++ G+ ++H I+HRDL P N
Sbjct: 97 DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPEN 156
Query: 550 IFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 606
+ ++++ I+I DFGL+ + + +D +GT +Y APE+
Sbjct: 157 LLLESKSKDANIRIIDFGLSTHFEASKKMKDK----------------IGTAYYIAPEVL 200
Query: 607 QGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ- 662
G DEK D++S G++ + L PF+ A E I+ K K K SE
Sbjct: 201 HG--TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESA 258
Query: 663 ESLLRRLMSPSPSDRPSATELLQD 686
+ L+R++++ PS R SA + L
Sbjct: 259 KDLIRKMLTYVPSMRISARDALDH 282
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 6e-45
Identities = 74/349 (21%), Positives = 133/349 (38%), Gaps = 80/349 (22%)
Query: 350 QKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY 409
V++ + P + P S + + LG GGF + +
Sbjct: 12 VPGVAAPGAPAAAPPAKEIPEVLVDPRS--RRRYVRGRFLGKGGFAKCFEISDADTKEVF 69
Query: 410 AVKKI-RLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTL 468
A K + + +++ E++ L HQHVV ++ +FE
Sbjct: 70 AGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG-FFED---------------- 112
Query: 469 ASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQ 527
+ ++++ +E C R +L ++ + + A + RQ
Sbjct: 113 -----------------------NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ 149
Query: 528 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGV 587
IV G ++H +IHRDL N+F + ++KIGDFGLA +++ D
Sbjct: 150 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT-----KVEYDGERKKVLC-- 202
Query: 588 SVDGTGQVGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPFST----AMER 638
GT Y APE+ ++G + D++S+G + + L PF T
Sbjct: 203 --------GTPNYIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 251
Query: 639 QIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686
+I +K E P + SL+++++ P+ RP+ ELL D
Sbjct: 252 RI------KKNEYSIPKHIN--PVAASLIQKMLQTDPTARPTINELLND 292
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 164 bits (417), Expect = 1e-44
Identities = 65/329 (19%), Positives = 115/329 (34%), Gaps = 34/329 (10%)
Query: 375 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI---RLKDKSLPVNDRILREV 431
+ +G G +G V + A+K + +++ + +RI EV
Sbjct: 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEV 79
Query: 432 ATLSRLQHQHVVRYYQAWFETG-----VADFDGDSMWGSGTLAS--STFSNRAASSADVT 484
+ +L H ++ R Y+ +E V + G G L + F + + +
Sbjct: 80 RLMKKLHHPNIARLYEV-YEDEQYICLVMEL----CHG-GHLLDKLNVFIDDSTGKCAMD 133
Query: 485 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544
+ ++ + ++L ++ RQI L ++H QGI HRD
Sbjct: 134 VVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRD 193
Query: 545 LTPNNIFFDARND--IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 602
+ P N F IK+ DFGL+K + T + GT ++ A
Sbjct: 194 IKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGM-----------TTKAGTPYFVA 242
Query: 603 PEI-EQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAK 658
PE+ K D +S G++ L PF + + L +K
Sbjct: 243 PEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNV 302
Query: 659 FSEQ-ESLLRRLMSPSPSDRPSATELLQD 686
S LL L++ + +R A LQ
Sbjct: 303 LSPLARDLLSNLLNRNVDERFDAMRALQH 331
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 2e-44
Identities = 76/319 (23%), Positives = 127/319 (39%), Gaps = 66/319 (20%)
Query: 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 435
+ + + LG G FG V+ CK+++ + YAVK I ILREV L
Sbjct: 17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLK 76
Query: 436 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 495
+L H ++++ ++ E +S+
Sbjct: 77 KLDHPNIMKLFEI-LE---------------------------------------DSSSF 96
Query: 496 YIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 554
YI E L F + A + +Q+ G+ ++H I+HRDL P NI ++
Sbjct: 97 YIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLES 156
Query: 555 RND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611
+ IKI DFGL+ + +D +GT +Y APE+ +G
Sbjct: 157 KEKDCDIKIIDFGLSTCFQQNTKMKDR----------------IGTAYYIAPEVLRG--T 198
Query: 612 IDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLR 667
DEK D++S G++ + L PF E I+ K S+ + L+R
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR 258
Query: 668 RLMSPSPSDRPSATELLQD 686
++++ PS R +AT+ L+
Sbjct: 259 KMLTFHPSLRITATQCLEH 277
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 161 bits (409), Expect = 3e-44
Identities = 76/338 (22%), Positives = 128/338 (37%), Gaps = 99/338 (29%)
Query: 372 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRLKDKSLPVNDRIL 428
++ + DF+ LG G F V ++ G A+K K + + R+
Sbjct: 2 LATCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAG--MVQRVQ 59
Query: 429 REVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQEN 488
EV +L+H ++ Y +FE
Sbjct: 60 NEVKIHCQLKHPSILELYN-YFED------------------------------------ 82
Query: 489 KLESTYLYIQMEYCPRTLRQVFESYDH-------FDKELAWHLFRQIVEGLAHIHGQGII 541
S Y+Y+ +E C E + F + A H QI+ G+ ++H GI+
Sbjct: 83 ---SNYVYLVLEMCHNG-----EMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGIL 134
Query: 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV-----G 596
HRDLT +N+ +IKI DFGLA + + G
Sbjct: 135 HRDLTLSNLLLTRNMNIKIADFGLA--------------------TQLKMPHEKHYTLCG 174
Query: 597 TYFYTAPEIEQGWPKI-DEKADMYSLGIVFFEL---WHPFST----AMERQIVLSDLKQK 648
T Y +PEI ++D++SLG +F+ L PF T ++VL+D +
Sbjct: 175 TPNYISPEIATR--SAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEM- 231
Query: 649 GELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686
PS+++ E + L+ +L+ +P+DR S + +L
Sbjct: 232 ----PSFLS--IEAKDLIHQLLRRNPADRLSLSSVLDH 263
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 166 bits (423), Expect = 5e-44
Identities = 78/384 (20%), Positives = 147/384 (38%), Gaps = 86/384 (22%)
Query: 349 HQKMVSSRVSQFWKPSVDSGSPNMSL--PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDG 406
H S + + +P M + + + +++ LG G +G V+LCK K
Sbjct: 2 HHHHHHSSGRENLYFQGIAINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGH 61
Query: 407 RHYAVKKIRLKDKSLPVN-----------DRILREVATLSRLQHQHVVRYYQAWFETGVA 455
A+K I+ + I E++ L L H ++++ + FE
Sbjct: 62 SEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF-DVFE---- 116
Query: 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD 514
+ Y Y+ E+ L + +
Sbjct: 117 -----------------------------------DKKYFYLVTEFYEGGELFEQIINRH 141
Query: 515 HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKL 571
FD+ A ++ +QI+ G+ ++H I+HRD+ P NI + +N IKI DFGL+ F
Sbjct: 142 KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK 201
Query: 572 EQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL--- 628
+ +D +GT +Y APE+ + K +EK D++S G++ + L
Sbjct: 202 DYKLRDR----------------LGTAYYIAPEVLKK--KYNEKCDVWSCGVIMYILLCG 243
Query: 629 WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQD- 686
+ PF ++ I+ K K + S++ + L++ +++ + R +A E L
Sbjct: 244 YPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSR 303
Query: 687 ------ALPPQMEYELLDNILRMM 704
+ + + L L M
Sbjct: 304 WIKKYANNINKSDQKTLCGALSNM 327
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 1e-43
Identities = 75/332 (22%), Positives = 127/332 (38%), Gaps = 75/332 (22%)
Query: 369 SPNMSLPSSRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRI 427
S +L ++D + LG G FG V L + + G +K I KD+S ++I
Sbjct: 9 SGRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTIN-KDRSQVPMEQI 67
Query: 428 LREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQE 487
E+ L L H ++++ ++ FE
Sbjct: 68 EAEIEVLKSLDHPNIIKIFEV-FED----------------------------------- 91
Query: 488 NKLESTYLYIQMEYCP------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 541
+YI ME C R + + L +Q++ LA+ H Q ++
Sbjct: 92 ----YHNMYIVMETCEGGELLER-IVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVV 146
Query: 542 HRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTY 598
H+DL P NI F + IKI DFGLA+ K ++ +A GT
Sbjct: 147 HKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNA----------------AGTA 190
Query: 599 FYTAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSW 655
Y APE+ + + K D++S G+V + L PF+ ++ ++
Sbjct: 191 LYMAPEVFKR--DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVEC 248
Query: 656 VAKFSEQ-ESLLRRLMSPSPSDRPSATELLQD 686
+ Q LL+++++ P RPSA ++L
Sbjct: 249 -RPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 8e-42
Identities = 70/322 (21%), Positives = 127/322 (39%), Gaps = 86/322 (26%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN--DRILREVATLSRL 437
++DF+ +PLG G FG+V L + K + A+K + K + ++ RE+ S L
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLF-KSQLEKEGVEHQLRREIEIQSHL 71
Query: 438 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
+H +++R Y +F +Y+
Sbjct: 72 RHPNILRMYN-YFHD---------------------------------------RKRIYL 91
Query: 498 QMEYCPRTLRQVFESYDH------FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 551
+E+ PR E Y FD++ + ++ + L + H + +IHRD+ P N+
Sbjct: 92 MLEFAPRG-----ELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLL 146
Query: 552 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611
+ ++KI DFG + + T GT Y PE+ +G
Sbjct: 147 MGYKGELKIADFGWSVHAPSLRRR------T-----------MCGTLDYLPPEMIEGKTH 189
Query: 612 IDEKADMYSLGIVFFELWH---PF--STAME--RQIVLSDLKQKGELPPSWVAKFSEQES 664
DEK D++ G++ +E PF + E R+IV DLK P +++ +
Sbjct: 190 -DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF-----PPFLS--DGSKD 241
Query: 665 LLRRLMSPSPSDRPSATELLQD 686
L+ +L+ P R +++
Sbjct: 242 LISKLLRYHPPQRLPLKGVMEH 263
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 153 bits (390), Expect = 9e-42
Identities = 72/311 (23%), Positives = 126/311 (40%), Gaps = 78/311 (25%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKI---RLKDKSLPVNDRILREVATLSRLQHQHVVRY 445
+G G +G V + K A KKI ++D DR +E+ + L H +++R
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDV-----DRFKQEIEIMKSLDHPNIIRL 71
Query: 446 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT 505
Y+ FE +T +Y+ ME C T
Sbjct: 72 YET-FED---------------------------------------NTDIYLVMELC--T 89
Query: 506 LRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IK 559
++FE F + A + + ++ +A+ H + HRDL P N F + +K
Sbjct: 90 GGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLK 149
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619
+ DFGLA K ++ + VGT +Y +P++ +G + D +
Sbjct: 150 LIDFGLAARFKPGKMMRTK----------------VGTPYYVSPQVLEG--LYGPECDEW 191
Query: 620 SLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPS 675
S G++ + L + PFS + +++L + P S Q ESL+RRL++ SP
Sbjct: 192 SAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPK 251
Query: 676 DRPSATELLQD 686
R ++ + L+
Sbjct: 252 QRITSLQALEH 262
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 155 bits (394), Expect = 1e-41
Identities = 71/368 (19%), Positives = 127/368 (34%), Gaps = 73/368 (19%)
Query: 326 SERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEE 385
S + LAS + + + + + + ++
Sbjct: 7 SGQAHSLASLAKT----WSSGSAKLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTH 62
Query: 386 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRY 445
+G G FG V K+K G AVKK+RL+ + E+ + L +V
Sbjct: 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRV-------EELVACAGLSSPRIVPL 115
Query: 446 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-R 504
Y G+ E ++ I ME
Sbjct: 116 Y-----------------GA-----------------------VREGPWVNIFMELLEGG 135
Query: 505 TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDF 563
+L Q+ + ++ A + Q +EGL ++H + I+H D+ +N+ + + + DF
Sbjct: 136 SLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDF 195
Query: 564 GLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623
G A L D + G + GT + APE+ G P D K D++S
Sbjct: 196 GHAL-----CLQPDGLGKSLLTGDYI-----PGTETHMAPEVVMGKPC-DAKVDIWSSCC 244
Query: 624 VFFELW---HPFSTAMERQIVL---SDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677
+ + HP++ + L S+ E+PPS ++ ++ + P R
Sbjct: 245 MMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQ---AIQEGLRKEPVHR 301
Query: 678 PSATELLQ 685
SA EL +
Sbjct: 302 ASAMELRR 309
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 155 bits (392), Expect = 3e-41
Identities = 48/383 (12%), Positives = 102/383 (26%), Gaps = 59/383 (15%)
Query: 325 FSERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSP-NMSLPSSRYLNDF 383
F G + + ++ + + + M S+ S ++G P +
Sbjct: 16 FQGPGDVVIEELFNRIPQANVRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTL 75
Query: 384 EELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVV 443
LG + ++ G + V ++ + ++E RL
Sbjct: 76 VRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKN 135
Query: 444 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP 503
+ + FD + V E + +
Sbjct: 136 QKQAKVHLRFIFPFDLVKDPQKKKMI------------RVRLDERDMWVLSRFFLYPRMQ 183
Query: 504 RTLRQVFES-------YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 556
L+ E + L Q++ LA +H G++H L P +I D R
Sbjct: 184 SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRG 243
Query: 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----------E 606
+ + F +D A + + PE+
Sbjct: 244 GVFLTGFEHLV--------RDGARVVS-----------SVSRGFEPPELEARRATISYHR 284
Query: 607 QGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQE 663
+ D ++LG+V + +W P + + +P +
Sbjct: 285 DRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRSCKNIPQP--VR----- 337
Query: 664 SLLRRLMSPSPSDRPSATELLQD 686
+LL + DR + ++
Sbjct: 338 ALLEGFLRYPKEDRLLPLQAMET 360
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 4e-41
Identities = 79/331 (23%), Positives = 132/331 (39%), Gaps = 74/331 (22%)
Query: 370 PNMSLPSSRYLNDFEEL----QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND 425
+ + + F E LG G FG V+ CK+++ + YAVK I
Sbjct: 7 HSSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS 66
Query: 426 RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTG 485
ILREV L +L H ++++ ++ E
Sbjct: 67 TILREVELLKKLDHPNIMKLFEI-LED--------------------------------- 92
Query: 486 QENKLESTYLYIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 542
S+ YI E T ++F+ F + A + +Q+ G+ ++H I+H
Sbjct: 93 ------SSSFYIVGELY--TGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVH 144
Query: 543 RDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 599
RDL P NI +++ IKI DFGL+ + +D +GT +
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR----------------IGTAY 188
Query: 600 YTAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWV 656
Y APE+ +G DEK D++S G++ + L PF E I+ K
Sbjct: 189 YIAPEVLRG--TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
Query: 657 AKFSEQ-ESLLRRLMSPSPSDRPSATELLQD 686
S+ + L+R++++ PS R +AT+ L+
Sbjct: 247 RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 152 bits (387), Expect = 5e-41
Identities = 78/351 (22%), Positives = 123/351 (35%), Gaps = 84/351 (23%)
Query: 352 MVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAV 411
M++ + P P + ++ LG GGFG V D A+
Sbjct: 2 MLTKPLQGPPAPPGTPTPPPGGKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAI 61
Query: 412 KKIR----LKDKSLPVNDRILREVATLSRL----QHQHVVRYYQAWFETGVADFDGDSMW 463
K I L L + EVA L ++ H V+R WFET
Sbjct: 62 KVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD-WFET----------- 109
Query: 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVF---ESYDHFDKEL 520
+ +E P + +F +
Sbjct: 110 ----------------------------QEGFMLVLER-PLPAQDLFDYITEKGPLGEGP 140
Query: 521 AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAA 579
+ F Q+V + H H +G++HRD+ NI D R K+ DFG L D
Sbjct: 141 SRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLH------DEP 194
Query: 580 FPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPFSTAM 636
+ GT Y+ PE A ++SLGI+ +++ PF
Sbjct: 195 YTD-----------FDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER-- 241
Query: 637 ERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686
+++I+ + EL P+ V+ + +L+RR ++P PS RPS E+L D
Sbjct: 242 DQEIL------EAELHFPAHVSP--DCCALIRRCLAPKPSSRPSLEEILLD 284
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 153 bits (389), Expect = 5e-41
Identities = 84/390 (21%), Positives = 146/390 (37%), Gaps = 101/390 (25%)
Query: 362 KPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRLKD 418
+P ++ Y + + PLG G FG V +K + VK K ++ +
Sbjct: 5 EPPKAVELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLE 64
Query: 419 KSL---PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSN 475
P ++ E+A LSR++H ++++ FE
Sbjct: 65 DCWIEDPKLGKVTLEIAILSRVEHANIIKVLDI-FEN----------------------- 100
Query: 476 RAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH------FDKELAWHLFRQIV 529
+ + ME L + + D+ LA ++FRQ+V
Sbjct: 101 ----------------QGFFQLVMEKHGSGL----DLFAFIDRHPRLDEPLASYIFRQLV 140
Query: 530 EGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV 589
+ ++ + IIHRD+ NI IK+ DFG A +L+ + F T
Sbjct: 141 SAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLE-----RGKLFYT------- 188
Query: 590 DGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLK 646
GT Y APE+ G P + +M+SLG+ + L +PF +L+
Sbjct: 189 ----FCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF----------CELE 234
Query: 647 Q--KGEL-PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP--QMEYELLDNIL 701
+ + + PP V+ E SL+ L+ P P R + +L+ D P L D
Sbjct: 235 ETVEAAIHPPYLVS--KELMSLVSGLLQPVPERRTTLEKLVTD---PWVTQPVNLAD--- 286
Query: 702 RMMHSSEDTSIYDKVVSSIFDEETLDMKHH 731
++ E+ +K S + +L+M +
Sbjct: 287 ---YTWEEVFRVNKPESGVLSAASLEMGNR 313
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 1e-40
Identities = 70/331 (21%), Positives = 128/331 (38%), Gaps = 68/331 (20%)
Query: 366 DSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND 425
+ + L ++ + LG G +G V ++ + A+K+I +D +
Sbjct: 7 EGDCESDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRY--SQ 64
Query: 426 RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTG 485
+ E+A L+H+++V+Y GS
Sbjct: 65 PLHEEIALHKHLKHKNIVQYL-----------------GS-------------------- 87
Query: 486 QENKLESTYLYIQMEYCPR-TLRQVFESYD---HFDKELAWHLFRQIVEGLAHIHGQGII 541
E+ ++ I ME P +L + S +++ +QI+EGL ++H I+
Sbjct: 88 ---FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 144
Query: 542 HRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFY 600
HRD+ +N+ + + +KI DFG +K L + + GT Y
Sbjct: 145 HRDIKGDNVLINTYSGVLKISDFGTSKRLA----------GINPCTETF-----TGTLQY 189
Query: 601 TAPE-IEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWV 656
APE I++G + AD++SLG E+ PF E Q + + ++ P
Sbjct: 190 MAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVG-MFKVHPEIP 248
Query: 657 AKFSEQ-ESLLRRLMSPSPSDRPSATELLQD 686
S + ++ + + P P R A +LL D
Sbjct: 249 ESMSAEAKAFILKCFEPDPDKRACANDLLVD 279
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304 | Back alignment and structure |
|---|
Score = 150 bits (381), Expect = 3e-40
Identities = 67/331 (20%), Positives = 131/331 (39%), Gaps = 86/331 (25%)
Query: 373 SLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVA 432
S+ ++ F ++ LG G F V L K +L G+ +A+K I K + + E+A
Sbjct: 1 SMQTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCI--KKSPAFRDSSLENEIA 58
Query: 433 TLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLES 492
L +++H+++V +E+ +
Sbjct: 59 VLKKIKHENIVTLED-IYES---------------------------------------T 78
Query: 493 TYLYIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 549
T+ Y+ M+ + ++F+ + ++ A + +Q++ + ++H GI+HRDL P N
Sbjct: 79 THYYLVMQLV--SGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPEN 136
Query: 550 IFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 606
+ + + I I DFGL+K + + + GT Y APE+
Sbjct: 137 LLYLTPEENSKIMITDFGLSKMEQNGIM-----------------STACGTPGYVAPEVL 179
Query: 607 QGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGEL---PPSW----- 655
P + D +S+G++ + L + PF E + L + ++G P W
Sbjct: 180 AQKP-YSKAVDCWSIGVITYILLCGYPPFYE--ETESKLFEKIKEGYYEFESPFWDDISE 236
Query: 656 VAKFSEQESLLRRLMSPSPSDRPSATELLQD 686
AK + L+ P++R + + L
Sbjct: 237 SAK-----DFICHLLEKDPNERYTCEKALSH 262
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 153 bits (387), Expect = 4e-40
Identities = 55/387 (14%), Positives = 108/387 (27%), Gaps = 52/387 (13%)
Query: 327 ERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNM--SLPSSRYLNDFE 384
+ G + + ++ + + + M S+ S ++G P S R
Sbjct: 23 DPGDVVIEELFNRIPQANVRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGERPR-TLV 81
Query: 385 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVV 443
LG + ++ G + V ++ ++ EV L L+
Sbjct: 82 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQ 141
Query: 444 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP 503
+ + D + V E + +
Sbjct: 142 KQAKVHLRFIFPF---DLVKDPQK----------KKMIRVRLDERDMWVLSRFFLYPRMQ 188
Query: 504 RTLRQVFE---SYDHFDKELAWH----LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 556
L+ E S+ K L H L Q++ LA +H G++H L P +I D R
Sbjct: 189 SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRG 248
Query: 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP----KI 612
+ + F A+ + G TA + +
Sbjct: 249 GVFLTGFEHLVRD-------GASAVSPIGRG-------FAPPETTAERMLPFGQHHPTLM 294
Query: 613 DEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRL 669
D ++LG+ + +W P + + +P +LL
Sbjct: 295 TFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSCKNIPQPV-------RALLEGF 347
Query: 670 MSPSPSDRPSATELLQDALPPQMEYEL 696
+ DR + ++ Q+ EL
Sbjct: 348 LRYPKEDRLLPLQAMETPEYEQLRTEL 374
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 2e-39
Identities = 77/360 (21%), Positives = 126/360 (35%), Gaps = 81/360 (22%)
Query: 341 NKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPS-SRYLNDFEELQPLGHGGFGHVVL 399
+ + H + R S + + + ++ LG GGFG V
Sbjct: 2 GSSHHHHHHSSGLVPRGSHMAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYS 61
Query: 400 CKNKLDGRHYAVK---KIRLKDKS-LPVNDRILREVATLSRLQHQ--HVVRYYQAWFETG 453
D A+K K R+ D LP R+ EV L ++ V+R WFE
Sbjct: 62 GIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD-WFER- 119
Query: 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVF--- 510
+ +E P ++ +F
Sbjct: 120 --------------------------------------PDSFVLILER-PEPVQDLFDFI 140
Query: 511 ESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFL 569
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG L
Sbjct: 141 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 200
Query: 570 KLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL- 628
K D + GT Y+ PE + A ++SLGI+ +++
Sbjct: 201 K------DTVYTD-----------FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 243
Query: 629 --WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686
PF + +I+ + V+ SE + L+R ++ PSDRP+ E+
Sbjct: 244 CGDIPFEH--DEEIIRGQVF-----FRQRVS--SECQHLIRWCLALRPSDRPTFEEIQNH 294
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 145 bits (369), Expect = 5e-39
Identities = 73/321 (22%), Positives = 131/321 (40%), Gaps = 65/321 (20%)
Query: 372 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREV 431
M++P ++ D++ +Q LG G +G V L N++ AVK + +++ + I +E+
Sbjct: 1 MAVP---FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEI 56
Query: 432 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 491
L H++VV++Y
Sbjct: 57 CINKMLNHENVVKFYGHR-RE--------------------------------------- 76
Query: 492 STYLYIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 548
Y+ +EYC ++F+ + A F Q++ G+ ++HG GI HRD+ P
Sbjct: 77 GNIQYLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 134
Query: 549 NIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608
N+ D R+++KI DFGLA + +++ GT Y APE+ +
Sbjct: 135 NLLLDERDNLKISDFGLATVFR--YNNRERLLNK-----------MCGTLPYVAPELLKR 181
Query: 609 WPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESL 665
E D++S GIV + P+ + SD K+K W S +L
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 666 LRRLMSPSPSDRPSATELLQD 686
L +++ +PS R + ++ +D
Sbjct: 242 LHKILVENPSARITIPDIKKD 262
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 7e-39
Identities = 58/350 (16%), Positives = 111/350 (31%), Gaps = 99/350 (28%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
+ + LG G +V ++K G +A+K L D +RE L +L H+
Sbjct: 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFN-NISFLRPVDVQMREFEVLKKLNHK 67
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
++V+ + E + + + ME
Sbjct: 68 NIVKLFAI-EEET-------------------------------------TTRHKVLIME 89
Query: 501 YCP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF---- 552
+CP T+ + + + + R +V G+ H+ GI+HR++ P NI
Sbjct: 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGE 149
Query: 553 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612
D ++ K+ DFG A+ L+ D F + GT Y P++ +
Sbjct: 150 DGQSVYKLTDFGAARE-----LEDDEQFVS-----------LYGTEEYLHPDMYERAVLR 193
Query: 613 -------DEKADMYSLGIVFFELWH---PFSTA---------MERQI------VLSDLKQ 647
D++S+G+ F+ PF M + I +S +++
Sbjct: 194 KDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQK 253
Query: 648 KGELPPSWVAKF-----------SEQESLLRRLMSPSPSDRPSATELLQD 686
P W +L ++ + +
Sbjct: 254 AENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 145 bits (369), Expect = 1e-38
Identities = 68/324 (20%), Positives = 118/324 (36%), Gaps = 74/324 (22%)
Query: 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRLKDKSLPVNDRILREVAT 433
++ + + LG G +G V + AVK K +L+ + +E+
Sbjct: 1 AKLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPN-GEANVKKEIQL 59
Query: 434 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLEST 493
L RL+H++V++ DV E K
Sbjct: 60 LRRLRHKNVIQLV-----------------------------------DVLYNEEK---Q 81
Query: 494 YLYIQMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 551
+Y+ MEYC ++++ +S F A F Q+++GL ++H QGI+H+D+ P N+
Sbjct: 82 KMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLL 141
Query: 552 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611
+KI G+A+ L D T G+ + PEI G
Sbjct: 142 LTTGGTLKISALGVAEA--LHPFAADDTCRT-----------SQGSPAFQPPEIANGLDT 188
Query: 612 ID-EKADMYSLGIVFFEL---WHPFS----TAMERQIVLSDLKQKGELP-PSWVAKFSEQ 662
K D++S G+ + + +PF + I KG P
Sbjct: 189 FSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENI------GKGSYAIPGDCG--PPL 240
Query: 663 ESLLRRLMSPSPSDRPSATELLQD 686
LL+ ++ P+ R S ++ Q
Sbjct: 241 SDLLKGMLEYEPAKRFSIRQIRQH 264
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 2e-38
Identities = 88/386 (22%), Positives = 152/386 (39%), Gaps = 96/386 (24%)
Query: 368 GSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRLKDKSLPVN 424
S ++ ++ L+ +G G F V L ++ L GR A+K K +L SL
Sbjct: 2 NSIASCADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSL--- 58
Query: 425 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 484
++ REV + L H ++V+ ++ ET
Sbjct: 59 QKLFREVRIMKILNHPNIVKLFEVI-ET-------------------------------- 85
Query: 485 GQENKLESTYLYIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGII 541
LY+ MEY +VF+ ++ ++ A FRQIV + + H + I+
Sbjct: 86 -------EKTLYLIMEYASG--GEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIV 136
Query: 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYT 601
HRDL N+ DA +IKI DFG + + D G Y
Sbjct: 137 HRDLKAENLLLDADMNIKIADFGFSNEFTVGGK-------LDA---------FCGAPPYA 180
Query: 602 APEIEQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQK---GELP-PS 654
APE+ QG + D++SLG++ + L PF L +L+++ G+ P
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ-----NLKELRERVLRGKYRIPF 235
Query: 655 WVAKFSEQESLLRRLMSPSPSDRPSATELLQD----------ALPPQMEYELL---DNIL 701
+++ + E+LL+R + +P R + ++++D L P +E EL +
Sbjct: 236 YMST--DCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQKRI 293
Query: 702 RMMHS--SEDTSIYDKVVSSIFDEET 725
+M I + + +DE T
Sbjct: 294 DIMVGMGYSQEEIQESLSKMKYDEIT 319
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 2e-38
Identities = 72/351 (20%), Positives = 136/351 (38%), Gaps = 82/351 (23%)
Query: 362 KPSVDSGSPNMSLPSSRYLNDFEEL---QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD 418
P+ ++ ++ + +L + +G G FG V + + G AVK + +D
Sbjct: 15 IPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTV--HRAEWHGSDVAVKILMEQD 72
Query: 419 KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAA 478
+ LREVA + RL+H ++V + G
Sbjct: 73 FHAERVNEFLREVAIMKRLRHPNIVLFM------GA------------------------ 102
Query: 479 SSADVTGQENKLESTYLYIQMEYCPR-TLRQVF---ESYDHFDKELAWHLFRQIVEGLAH 534
VT N L I EY R +L ++ + + D+ + + +G+ +
Sbjct: 103 ----VTQPPN------LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNY 152
Query: 535 IHGQG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGT 592
+H + I+HR+L N+ D + +K+ DFGL++ +
Sbjct: 153 LHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST---------------FLSSK 197
Query: 593 GQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKG 649
GT + APE+ + P +EK+D+YS G++ +EL P+ Q+V + +
Sbjct: 198 SAAGTPEWMAPEVLRDEP-SNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK 256
Query: 650 --ELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE-------LLQDALPPQ 691
E+P + + + ++ + P RPS L++ A+PP
Sbjct: 257 RLEIPRNLNPQVAA---IIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPP 304
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 3e-38
Identities = 70/348 (20%), Positives = 120/348 (34%), Gaps = 102/348 (29%)
Query: 373 SLPSSRYLNDFEEL----QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP------ 422
+LP S + F E + LG G V C +K + YAVK I +
Sbjct: 5 ALPGSHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ 64
Query: 423 -VNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASS 480
+ + L+EV L ++ H ++++ +ET
Sbjct: 65 ELREATLKEVDILRKVSGHPNIIQLKDT-YET---------------------------- 95
Query: 481 ADVTGQENKLESTYLYIQMEYCP------RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534
+T+ ++ + +V ++ + R ++E +
Sbjct: 96 -----------NTFFFLVFDLMKKGELFDYLTEKV-----TLSEKETRKIMRALLEVICA 139
Query: 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 594
+H I+HRDL P NI D +IK+ DFG + L + ++
Sbjct: 140 LHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV---------------- 183
Query: 595 VGTYFYTAPEI-----EQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLK 646
GT Y APEI P ++ DM+S G++ + L PF +Q+++ +
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH--RKQMLMLRMI 241
Query: 647 QKGEL---PPSW-----VAKFSEQESLLRRLMSPSPSDRPSATELLQD 686
G P W K L+ R + P R +A E L
Sbjct: 242 MSGNYQFGSPEWDDYSDTVK-----DLVSRFLVVQPQKRYTAEEALAH 284
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 3e-38
Identities = 79/363 (21%), Positives = 144/363 (39%), Gaps = 66/363 (18%)
Query: 372 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREV 431
M++P ++ D++ +Q LG G +G V L N++ AVK + +++ + I +E+
Sbjct: 1 MAVP---FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEI 56
Query: 432 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 491
L H++VV++Y
Sbjct: 57 CINKMLNHENVVKFYGHR-RE--------------------------------------- 76
Query: 492 STYLYIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 548
Y+ +EYC ++F+ + A F Q++ G+ ++HG GI HRD+ P
Sbjct: 77 GNIQYLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 134
Query: 549 NIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608
N+ D R+++KI DFGLA + +++ GT Y APE+ +
Sbjct: 135 NLLLDERDNLKISDFGLATVFR--YNNRERLLNK-----------MCGTLPYVAPELLKR 181
Query: 609 WPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESL 665
E D++S GIV + P+ + SD K+K W S +L
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 666 LRRLMSPSPSDRPSATELLQDA-LPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEE 724
L +++ +PS R + ++ +D ++ + SE S + K + S D
Sbjct: 242 LHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVSESPSGFSKHIQSNLDFS 301
Query: 725 TLD 727
++
Sbjct: 302 PVN 304
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 146 bits (369), Expect = 4e-38
Identities = 69/390 (17%), Positives = 128/390 (32%), Gaps = 109/390 (27%)
Query: 333 ASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEEL----QP 388
S +K+ ++ S P LP +F +
Sbjct: 42 RSLRDDPSQSANLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDV 101
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLK------DKSLPVNDRILREVATLSRL-QHQH 441
+G G V C ++ G +AVK + + ++ V + RE L ++ H H
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPH 161
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
++ + +E+ S+++++ +
Sbjct: 162 IITLIDS-YES---------------------------------------SSFMFLVFDL 181
Query: 502 CP------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 555
+V ++ + R ++E ++ +H I+HRDL P NI D
Sbjct: 182 MRKGELFDYLTEKV-----ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDN 236
Query: 556 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI--- 612
I++ DFG + L+ + ++ GT Y APEI +
Sbjct: 237 MQIRLSDFGFSCHLEPGEKLREL----------------CGTPGYLAPEILKCSMDETHP 280
Query: 613 --DEKADMYSLGIVFFEL-------WHPFSTAMERQIVLSDLKQKGEL---PPSW----- 655
++ D+++ G++ F L WH M R I +G+ P W
Sbjct: 281 GYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMI------MEGQYQFSSPEWDDRSS 334
Query: 656 VAKFSEQESLLRRLMSPSPSDRPSATELLQ 685
K L+ RL+ P R +A + LQ
Sbjct: 335 TVK-----DLISRLLQVDPEARLTAEQALQ 359
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 144 bits (366), Expect = 4e-38
Identities = 78/327 (23%), Positives = 125/327 (38%), Gaps = 83/327 (25%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-Q 438
D ++L +G G +G V +K G+ AVK+IR ++L ++ + R
Sbjct: 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRS-TVDEKEQKQLLMDLDVVMRSSD 79
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
++V++Y A F +GD +I
Sbjct: 80 CPYIVQFYGALFR------EGD----------------------------------CWIC 99
Query: 499 MEYC----PRTLRQVFESYDHFDKE--LAWHLFRQIVEGLAHIHGQG-IIHRDLTPNNIF 551
ME + + V+ D E L + V+ L H+ IIHRD+ P+NI
Sbjct: 100 MELMSTSFDKFYKYVYSVLDDVIPEEILG-KITLATVKALNHLKENLKIIHRDIKPSNIL 158
Query: 552 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWP 610
D +IK+ DFG++ QL S+ T G Y APE I+
Sbjct: 159 LDRSGNIKLCDFGISG-----QLVD-----------SIAKTRDAGCRPYMAPERIDPSAS 202
Query: 611 KI--DEKADMYSLGIVFFEL---------WHPFSTAMERQIVLSDLKQKGELPPSWVAKF 659
+ D ++D++SLGI +EL W+ + Q+V D Q L S +F
Sbjct: 203 RQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLT-QVVKGDPPQ---LSNSEEREF 258
Query: 660 SEQ-ESLLRRLMSPSPSDRPSATELLQ 685
S + + ++ S RP ELL+
Sbjct: 259 SPSFINFVNLCLTKDESKRPKYKELLK 285
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 6e-38
Identities = 66/338 (19%), Positives = 111/338 (32%), Gaps = 70/338 (20%)
Query: 368 GSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRI 427
G ++ +E + LG GGFG+V+ ++ G A+K+ R ++ S +R
Sbjct: 1 GGGRSPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCR-QELSPKNRERW 59
Query: 428 LREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQE 487
E+ + +L H +VV + + +
Sbjct: 60 CLEIQIMKKLNHPNVVSAREV-PDG---------------------------------LQ 85
Query: 488 NKLESTYLYIQMEYCPR-TLRQVFESYDH---FDKELAWHLFRQIVEGLAHIHGQGIIHR 543
+ + MEYC LR+ +++ + L I L ++H IIHR
Sbjct: 86 KLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHR 145
Query: 544 DLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFY 600
DL P NI KI D G AK LDQ VGT Y
Sbjct: 146 DLKPENIVLQPGPQRLIHKIIDLGYAKE-----LDQGELCTE-----------FVGTLQY 189
Query: 601 TAPEIEQGWPKIDEKADMYSLGIVFFEL------WHPFSTAMERQIVLSDLKQKGELPPS 654
APE+ + K D +S G + FE + P ++ +++K
Sbjct: 190 LAPELLEQ-KKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGK---VREKSNEHIV 245
Query: 655 WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692
++ + P+P+ + M
Sbjct: 246 V--YDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCM 281
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 144 bits (366), Expect = 7e-38
Identities = 55/357 (15%), Positives = 120/357 (33%), Gaps = 109/357 (30%)
Query: 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI---------------RLKDKSLP 422
+Y+ND+ ++ L G F ++LC+ + YA+KK K
Sbjct: 28 KYINDYRIIRTLNQGKFNKIILCEKD--NKFYALKKYEKSLLEKKRDFTKSNNDKISIKS 85
Query: 423 VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSAD 482
D E+ ++ +++++ +
Sbjct: 86 KYDDFKNELQIITDIKNEYCLTCEG-IITN------------------------------ 114
Query: 483 VTGQENKLESTYLYIQMEYCP---------RTLRQVFESYDHFDKELAWHLFRQIVEGLA 533
+YI EY ++ + + ++ +
Sbjct: 115 ---------YDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFS 165
Query: 534 HIHGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGT 592
+IH + I HRD+ P+NI D +K+ DFG ++++ +++
Sbjct: 166 YIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKI-----------------K 208
Query: 593 GQVGTYFYTAPEIEQGWPKID-EKADMYSLGIVFFEL---WHPFST-----AMERQIVLS 643
G GTY + PE + K D++SLGI + + PFS + I
Sbjct: 209 GSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTK 268
Query: 644 DLK--------------QKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686
+++ +K ++++ +E L+ + +P++R ++ + L+
Sbjct: 269 NIEYPLDRNHFLYPLTNKKSTCSNNFLS--NEDIDFLKLFLRKNPAERITSEDALKH 323
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 1e-37
Identities = 68/331 (20%), Positives = 127/331 (38%), Gaps = 89/331 (26%)
Query: 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 435
S+++ ++++ + LG G F V C +K G +A K I K S ++ RE
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 436 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 495
+LQH ++VR + + + ++
Sbjct: 61 KLQHPNIVRLHDS-IQE---------------------------------------ESFH 80
Query: 496 YIQMEYCPRTLRQVFESYD------HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 549
Y+ + E ++ + + A H +QI+E +A+ H GI+HR+L P N
Sbjct: 81 YLVFDLVTG-----GELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPEN 135
Query: 550 IFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 606
+ ++ +K+ DFGLA + + GT Y +PE+
Sbjct: 136 LLLASKAKGAAVKLADFGLAIEVNDSEAWHGF----------------AGTPGYLSPEVL 179
Query: 607 QGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGEL---PPSW----- 655
+ P + D+++ G++ + L + PF E Q L + G P W
Sbjct: 180 KKDP-YSKPVDIWACGVILYILLVGYPPFWD--EDQHRLYAQIKAGAYDYPSPEWDTVTP 236
Query: 656 VAKFSEQESLLRRLMSPSPSDRPSATELLQD 686
AK SL+ +++ +P R +A + L+
Sbjct: 237 EAK-----SLIDSMLTVNPKKRITADQALKV 262
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 1e-37
Identities = 57/350 (16%), Positives = 111/350 (31%), Gaps = 99/350 (28%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
+ + LG G +V ++K G +A+K L D +RE L +L H+
Sbjct: 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFN-NISFLRPVDVQMREFEVLKKLNHK 67
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
++V+ + E + + + ME
Sbjct: 68 NIVKLFAI-EEET-------------------------------------TTRHKVLIME 89
Query: 501 YCP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF---- 552
+CP T+ + + + + R +V G+ H+ GI+HR++ P NI
Sbjct: 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGE 149
Query: 553 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612
D ++ K+ DFG A+ L+ D F + GT Y P++ +
Sbjct: 150 DGQSVYKLTDFGAARE-----LEDDEQFVS-----------LYGTEEYLHPDMYERAVLR 193
Query: 613 -------DEKADMYSLGIVFFEL------WHPFSTAMERQIVL------------SDLKQ 647
D++S+G+ F+ + PF + V+ S +++
Sbjct: 194 KDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQK 253
Query: 648 KGELPPSWVAKF-----------SEQESLLRRLMSPSPSDRPSATELLQD 686
P W +L ++ + +
Sbjct: 254 AENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 142 bits (359), Expect = 1e-37
Identities = 71/318 (22%), Positives = 114/318 (35%), Gaps = 72/318 (22%)
Query: 382 DFEELQ---PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 438
++ +G G FG V K K G AVK + + + EV L + +
Sbjct: 22 PDGQITVGQRIGSGSFGTV--YKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 78
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
H +++ + G T + L I
Sbjct: 79 HVNILLFM------GY----------------------------STAPQ-------LAIV 97
Query: 499 MEYCPR-TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 556
++C +L + + F+ + + RQ G+ ++H + IIHRDL NNIF N
Sbjct: 98 TQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDN 157
Query: 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKIDE 614
+KIGDFGLA G+ + APE+ Q
Sbjct: 158 TVKIGDFGLATEKSRWSGSHQF-------------EQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM- 670
++D+Y+ GIV +EL P+S R ++ + +G L P S ++RLM
Sbjct: 205 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV-GRGSLSPDLSKVRSNCPKRMKRLMA 263
Query: 671 ---SPSPSDRPSATELLQ 685
+RPS +L
Sbjct: 264 ECLKKKRDERPSFPRILA 281
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 2e-37
Identities = 86/371 (23%), Positives = 140/371 (37%), Gaps = 91/371 (24%)
Query: 336 PSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRY--LNDFEEL-QPLGHG 392
SS + ++ Q M S S P S P+ + S L+DF E+ LG G
Sbjct: 7 HSSGVDLGTENLYFQSMSSVTASA--APGTASLVPDYWIDGSNRDALSDFFEVESELGRG 64
Query: 393 GFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFET 452
V CK K + YA+K ++ + E+ L RL H ++++ + FET
Sbjct: 65 ATSIVYRCKQKGTQKPYALKVLKKTVD----KKIVRTEIGVLLRLSHPNIIKLKE-IFET 119
Query: 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE- 511
T + + +E T ++F+
Sbjct: 120 ---------------------------------------PTEISLVLELV--TGGELFDR 138
Query: 512 --SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLA 566
++ + A +QI+E +A++H GI+HRDL P N+ + +KI DFGL+
Sbjct: 139 IVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLS 198
Query: 567 KFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 626
K ++ + L + GT Y APEI +G + DM+S+GI+ +
Sbjct: 199 KIVEHQVLMKTV----------------CGTPGYCAPEILRGCA-YGPEVDMWSVGIITY 241
Query: 627 EL---WHPFSTAMERQIVLSDLKQKGEL---PPSW-----VAKFSEQESLLRRLMSPSPS 675
L + PF + E P W AK L+R+L+ P
Sbjct: 242 ILLCGFEPFY-DERGDQFMFRRILNCEYYFISPWWDEVSLNAK-----DLVRKLIVLDPK 295
Query: 676 DRPSATELLQD 686
R + + LQ
Sbjct: 296 KRLTTFQALQH 306
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 2e-37
Identities = 70/355 (19%), Positives = 125/355 (35%), Gaps = 98/355 (27%)
Query: 368 GSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRLKDKSLPVN 424
GS S + LN + +G G +G V L N+ D +YA+K K +L ++
Sbjct: 1 GSSGSSGDCVQ-LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPR 59
Query: 425 ---------------------DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 463
+++ +E+A L +L H +VV+ +
Sbjct: 60 RPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVL-------------- 105
Query: 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH--FDKELA 521
+ +LY+ E + V E ++ A
Sbjct: 106 ------------------------DDPNEDHLYMVFELVNQ--GPVMEVPTLKPLSEDQA 139
Query: 522 WHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFP 581
F+ +++G+ ++H Q IIHRD+ P+N+ IKI DFG++ K DA
Sbjct: 140 RFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK----GSDALLS 195
Query: 582 TDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI--DEKADMYSLGIVFFELWH---PFS--- 633
VGT + APE KI + D++++G+ + PF
Sbjct: 196 N-----------TVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244
Query: 634 -TAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686
+ +I + L P + + L+ R++ +P R E+
Sbjct: 245 IMCLHSKI------KSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 145 bits (369), Expect = 2e-37
Identities = 72/331 (21%), Positives = 131/331 (39%), Gaps = 82/331 (24%)
Query: 373 SLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVA 432
++ +R+ +++ + LG G F V C L G+ YA I K S + ++ RE
Sbjct: 3 TITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREAR 62
Query: 433 TLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLES 492
L+H ++VR +
Sbjct: 63 ICRLLKHPNIVRLHD-SISE---------------------------------------E 82
Query: 493 TYLYIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 549
+ Y+ + T ++FE + +++ + A H +QI+E + H H G++HR+L P N
Sbjct: 83 GHHYLIFDLV--TGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPEN 140
Query: 550 IFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 606
+ ++ +K+ DFGLA ++ EQ G GT Y +PE+
Sbjct: 141 LLLASKLKGAAVKLADFGLAIEVEGEQ---------------QAWFGFAGTPGYLSPEVL 185
Query: 607 QGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGEL---PPSW----- 655
+ P + D+++ G++ + L + PF E Q L + G P W
Sbjct: 186 RKDP-YGKPVDLWACGVILYILLVGYPPFWD--EDQHRLYQQIKAGAYDFPSPEWDTVTP 242
Query: 656 VAKFSEQESLLRRLMSPSPSDRPSATELLQD 686
AK L+ ++++ +PS R +A E L+
Sbjct: 243 EAK-----DLINKMLTINPSKRITAAEALKH 268
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 3e-37
Identities = 61/309 (19%), Positives = 108/309 (34%), Gaps = 76/309 (24%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 448
LG G FG V C + Y K +++K + +E++ L+ +H++++ +++
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD---QVLVKKEISILNIARHRNILHLHES 69
Query: 449 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP----- 503
FE+ L + E+
Sbjct: 70 -FES---------------------------------------MEELVMIFEFISGLDIF 89
Query: 504 -RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND--IKI 560
R + S ++ Q+ E L +H I H D+ P NI + R IKI
Sbjct: 90 ER----INTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKI 145
Query: 561 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620
+FG A+ LK + Y APE+ Q + DM+S
Sbjct: 146 IEFGQARQLKPGDNFRLL----------------FTAPEYYAPEVHQHDV-VSTATDMWS 188
Query: 621 LGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSD 676
LG + + L +PF +QI+ + + + + S + + RL+
Sbjct: 189 LGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKS 248
Query: 677 RPSATELLQ 685
R +A+E LQ
Sbjct: 249 RMTASEALQ 257
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 5e-37
Identities = 74/351 (21%), Positives = 132/351 (37%), Gaps = 96/351 (27%)
Query: 368 GSPNMSLPSSRYLN------DFEEL----QPLGHGGFGHVVLCKNKLDGRHYAVKKI--- 414
GSP +S L+ FE++ + +G G F V C N+ G+ +AVK +
Sbjct: 1 GSPGISGGGGGILDMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVA 60
Query: 415 RLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFS 474
+ + + RE + L+H H+V + + +
Sbjct: 61 KFTSSPGLSTEDLKREASICHMLKHPHIVELLET-YSS---------------------- 97
Query: 475 NRAASSADVTGQENKLESTYLYIQMEYCP------RTLRQVFESYDHFDKELAWHLFRQI 528
LY+ E+ +++ + + + A H RQI
Sbjct: 98 -----------------DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV-ASHYMRQI 139
Query: 529 VEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTG 585
+E L + H IIHRD+ P+ + ++ + +K+G FG+A L +
Sbjct: 140 LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG----ESGLVA----- 190
Query: 586 GVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPF---STAMERQ 639
G+VGT + APE+ + P + D++ G++ F L PF +
Sbjct: 191 ------GGRVGTPHFMAPEVVKREP-YGKPVDVWGCGVILFILLSGCLPFYGTKERLFEG 243
Query: 640 IVLSDLKQKGEL---PPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQD 686
I KG+ P W + SE + L+RR++ P++R + E L
Sbjct: 244 I------IKGKYKMNPRQW-SHISESAKDLVRRMLMLDPAERITVYEALNH 287
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 6e-37
Identities = 72/333 (21%), Positives = 118/333 (35%), Gaps = 90/333 (27%)
Query: 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRY 445
LG G V C N + + YAVK I + + + R+ REV L + Q H++V+
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKII--EKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 446 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-- 503
+ FE E Y+ E
Sbjct: 77 IEF-FE---------------------------------------EEDRFYLVFEKMRGG 96
Query: 504 ----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND-- 557
++ HF++ A + + + L +H +GI HRDL P NI + N
Sbjct: 97 SILSHIHKRR-----HFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVS 151
Query: 558 -IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----EQGWPKI 612
+KI DF L +KL + P + G+ Y APE+ +
Sbjct: 152 PVKICDFDLGSGIKLNGDCSPISTP--------ELLTPCGSAEYMAPEVVEAFSEEASIY 203
Query: 613 DEKADMYSLGIVFF----------------ELWHPFSTAMERQIVLSDLKQKGEL---PP 653
D++ D++SLG++ + W Q +L + Q+G+
Sbjct: 204 DKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDK 263
Query: 654 SWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQ 685
W A S + L+ +L+ R SA ++LQ
Sbjct: 264 DW-AHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 7e-37
Identities = 66/345 (19%), Positives = 117/345 (33%), Gaps = 102/345 (29%)
Query: 375 PSSRYLNDFEEL----QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK------DKSLPVN 424
S Y + + LG G G V L + + A++ I + +
Sbjct: 125 DQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPA 184
Query: 425 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 484
+ E+ L +L H +++ +
Sbjct: 185 LNVETEIEILKKLNHPCIIKIKNFF----------------------------------- 209
Query: 485 GQENKLESTYLYIQMEYCP------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538
++ YI +E + + + F Q++ + ++H
Sbjct: 210 ------DAEDYYIVLELMEGGELFDKVVGNK-----RLKEATCKLYFYQMLLAVQYLHEN 258
Query: 539 GIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 595
GIIHRDL P N+ ++ + IKI DFG +K L + +
Sbjct: 259 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------ETSLMRTL----------C 302
Query: 596 GTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPFS-----TAMERQIVLSDL 645
GT Y APE+ G + D +SLG++ F + PFS +++ QI
Sbjct: 303 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI----- 357
Query: 646 KQKGEL---PPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQD 686
G+ P W A+ SE+ L+++L+ P R + E L+
Sbjct: 358 -TSGKYNFIPEVW-AEVSEKALDLVKKLLVVDPKARFTTEEALRH 400
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 9e-37
Identities = 72/364 (19%), Positives = 136/364 (37%), Gaps = 74/364 (20%)
Query: 335 KPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEEL-QPLGHGG 393
+ ++ V + VSS + P ++ D ++ + LG G
Sbjct: 110 RRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGA 169
Query: 394 FGHVVLCKNKLDGRHYAVKKI---RLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWF 450
FG V + G ++A K + DK + + +E+ T+S L+H +V + A F
Sbjct: 170 FGVVHRVTERATGNNFAAKFVMTPHESDK-----ETVRKEIQTMSVLRHPTLVNLHDA-F 223
Query: 451 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP--RTLRQ 508
E + + E+ +
Sbjct: 224 ED---------------------------------------DNEMVMIYEFMSGGELFEK 244
Query: 509 VFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR--NDIKIGDFGLA 566
V + ++ ++ A RQ+ +GL H+H +H DL P NI F + N++K+ DFGL
Sbjct: 245 VADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLT 304
Query: 567 KFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 626
L +Q + GT + APE+ +G P + DM+S+G++ +
Sbjct: 305 AHLDPKQSVKVT----------------TGTAEFAAPEVAEGKP-VGYYTDMWSVGVLSY 347
Query: 627 EL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATE 682
L PF + + + + + S + SE + +R+L+ P+ R + +
Sbjct: 348 ILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQ 407
Query: 683 LLQD 686
L+
Sbjct: 408 ALEH 411
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 1e-36
Identities = 75/354 (21%), Positives = 130/354 (36%), Gaps = 97/354 (27%)
Query: 377 SRYLNDFEELQ---PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVAT 433
S ++ D++E++ +G G FG V CK K + A+K+I + + E+
Sbjct: 1 SLHMIDYKEIEVEEVVGRGAFGVV--CKAKWRAKDVAIKQIESES----ERKAFIVELRQ 54
Query: 434 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLEST 493
LSR+ H ++V+ Y A
Sbjct: 55 LSRVNHPNIVKLYGACLNP----------------------------------------- 73
Query: 494 YLYIQMEYCPR-TLRQVF---ESYDHFDKELAWHLFRQIVEGLAHIHG---QGIIHRDLT 546
+ + MEY +L V E ++ A Q +G+A++H + +IHRDL
Sbjct: 74 -VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLK 132
Query: 547 PNNIFFDARND-IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 605
P N+ A +KI DFG A ++ T G+ + APE+
Sbjct: 133 PPNLLLVAGGTVLKICDFGTACDIQTHM------------------TNNKGSAAWMAPEV 174
Query: 606 EQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKG---ELPPSWVAKF 659
+G EK D++S GI+ +E+ PF + G L +
Sbjct: 175 FEGSN-YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPI 233
Query: 660 SEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIY 713
L+ R S PS RPS E+++ ++ +++R +++ Y
Sbjct: 234 ES---LMTRCWSKDPSQRPSMEEIVK----------IMTHLMRYFPGADEPLQY 274
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 140 bits (356), Expect = 1e-36
Identities = 74/340 (21%), Positives = 128/340 (37%), Gaps = 76/340 (22%)
Query: 363 PSVDSGSPNMSLPSSRYLNDFEEL--QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS 420
VD G+ N+ S N+F L + LG G F V C +K G+ YA K ++ + +
Sbjct: 9 SGVDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG 68
Query: 421 LPVNDRILREVATLSRLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAAS 479
IL E+A L + V+ ++ +E
Sbjct: 69 QDCRAEILHEIAVLELAKSCPRVINLHEV-YEN--------------------------- 100
Query: 480 SADVTGQENKLESTYLYIQMEYCP------RTLRQVFESYDHFDKELAWHLFRQIVEGLA 533
++ + + +EY L ++ E D L +QI+EG+
Sbjct: 101 ------------TSEIILILEYAAGGEIFSLCLPELAEMVSEND---VIRLIKQILEGVY 145
Query: 534 HIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 590
++H I+H DL P NI + IKI DFG+++ + ++
Sbjct: 146 YLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREI------------ 193
Query: 591 GTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQ 647
+GT Y APEI P I DM+++GI+ + L PF ++ L+ +
Sbjct: 194 ----MGTPEYLAPEILNYDP-ITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQV 248
Query: 648 KGELPPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQD 686
+ + S+ ++ L+ +P RP+A L
Sbjct: 249 NVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 139 bits (353), Expect = 2e-36
Identities = 69/339 (20%), Positives = 119/339 (35%), Gaps = 88/339 (25%)
Query: 372 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK------DKSLPVND 425
MS+ +++ + LG G G V L + + A+K I + +
Sbjct: 1 MSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL 60
Query: 426 RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTG 485
+ E+ L +L H +++ +
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNFF------------------------------------ 84
Query: 486 QENKLESTYLYIQMEYCP------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539
++ YI +E + + + F Q++ + ++H G
Sbjct: 85 -----DAEDYYIVLELMEGGELFDKVVGNK-----RLKEATCKLYFYQMLLAVQYLHENG 134
Query: 540 IIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 596
IIHRDL P N+ ++ + IKI DFG +K L L + G
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL----------------CG 178
Query: 597 TYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGEL 651
T Y APE+ G + D +SLG++ F + PFS Q+ L D G+
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS-EHRTQVSLKDQITSGKY 237
Query: 652 ---PPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQD 686
P W A+ SE+ L+++L+ P R + E L+
Sbjct: 238 NFIPEVW-AEVSEKALDLVKKLLVVDPKARFTTEEALRH 275
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 140 bits (356), Expect = 2e-36
Identities = 73/344 (21%), Positives = 134/344 (38%), Gaps = 89/344 (25%)
Query: 363 PSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP 422
+ GS M S+++ ++++ + LG G F V C +K G +A K I K S
Sbjct: 11 QQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR 70
Query: 423 VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSAD 482
++ RE +LQH ++VR + + +
Sbjct: 71 DFQKLEREARICRKLQHPNIVRLHDS-IQE------------------------------ 99
Query: 483 VTGQENKLESTYLYIQMEYCPRTLRQVFESYD------HFDKELAWHLFRQIVEGLAHIH 536
++ Y+ + E ++ + + A H +QI+E +A+ H
Sbjct: 100 ---------ESFHYLVFDLVTG-----GELFEDIVAREFYSEADASHCIQQILESIAYCH 145
Query: 537 GQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTG 593
GI+HR+L P N+ ++ +K+ DFGLA + + A+ G
Sbjct: 146 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE-----AW-----------HG 189
Query: 594 QVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGE 650
GT Y +PE+ + P + D+++ G++ + L + PF E Q L + G
Sbjct: 190 FAGTPGYLSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPFWD--EDQHRLYAQIKAGA 246
Query: 651 L---PPSW-----VAKFSEQESLLRRLMSPSPSDRPSATELLQD 686
P W AK SL+ +++ +P R +A + L+
Sbjct: 247 YDYPSPEWDTVTPEAK-----SLIDSMLTVNPKKRITADQALKV 285
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 3e-36
Identities = 79/320 (24%), Positives = 126/320 (39%), Gaps = 68/320 (21%)
Query: 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL---KDKSLPVNDRILREVATL 434
RY E + LG GG V L ++ D R AVK +R +D S R RE
Sbjct: 13 RY----ELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSF--YLRFRREAQNA 66
Query: 435 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 494
+ L H +V Y D G+
Sbjct: 67 AALNHPAIVAVY-----------------------------------DT-GEAETPAGPL 90
Query: 495 LYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 553
YI MEY TLR + + + A + + L H GIIHRD+ P NI
Sbjct: 91 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 554 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613
A N +K+ DFG+A+ + T T V +GT Y +PE +G +D
Sbjct: 151 ATNAVKVMDFGIARA-----IADSGNSVTQTAAV-------IGTAQYLSPEQARGDS-VD 197
Query: 614 EKADMYSLGIVFFELW---HPFS--TAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLR 667
++D+YSLG V +E+ PF+ + + + +++ P + S ++++
Sbjct: 198 ARSDVYSLGCVLYEVLTGEPPFTGDSPV--SVAYQHVREDPIPPSARHEGLSADLDAVVL 255
Query: 668 RLMSPSPSDRP-SATELLQD 686
+ ++ +P +R +A E+ D
Sbjct: 256 KALAKNPENRYQTAAEMRAD 275
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 3e-36
Identities = 64/321 (19%), Positives = 115/321 (35%), Gaps = 88/321 (27%)
Query: 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRY 445
Q LG G G V+ C ++ G+ A+K + S + +EV + H+V
Sbjct: 35 QVLGLGVNGKVLECFHRRTGQKCALKLL---YDS----PKARQEVDHHWQASGGPHIVCI 87
Query: 446 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-- 503
+E L I ME
Sbjct: 88 LDV-YENMHH-----------------------------------GKRCLLIIMECMEGG 111
Query: 504 ----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND-- 557
R + +++ + A + R I + +H I HRD+ P N+ + ++
Sbjct: 112 ELFSRIQERGDQAFTERE---AAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDA 168
Query: 558 -IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKIDE 614
+K+ DFG AK L T +Y APE+ + + D+
Sbjct: 169 VLKLTDFGFAKETTQNAL-----------------QTPCYTPYYVAPEVLGPEKY---DK 208
Query: 615 KADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQ--KGEL---PPSWVAKFSEQ-ESL 665
DM+SLG++ + L + PF + + I ++ G+ P W ++ SE + L
Sbjct: 209 SCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEW-SEVSEDAKQL 267
Query: 666 LRRLMSPSPSDRPSATELLQD 686
+R L+ P++R + T+ +
Sbjct: 268 IRLLLKTDPTERLTITQFMNH 288
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 4e-36
Identities = 60/251 (23%), Positives = 107/251 (42%), Gaps = 29/251 (11%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+ + LG G FG V + G+ +A+KK+ + RE+ + L H ++
Sbjct: 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVLDHVNI 62
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
++ ++ TG D + N ++ + N ++ YL + MEY
Sbjct: 63 IKLVDYFYTTG--DEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYV 120
Query: 503 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
P TL +V +S+ + + +L Q+ + IH GI HRD+ P N+ +++++
Sbjct: 121 PDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNT 180
Query: 559 -KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617
K+ DFG AK L + + + FY APE+ G + D
Sbjct: 181 LKLCDFGSAKKLIPSE----------------PSVAYICSRFYRAPELMLGATEYTPSID 224
Query: 618 MYSLGIVFFEL 628
++S+G VF EL
Sbjct: 225 LWSIGCVFGEL 235
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 4e-36
Identities = 76/404 (18%), Positives = 149/404 (36%), Gaps = 79/404 (19%)
Query: 367 SGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR 426
+ + +P + ++ ++ +G G FG L ++KL AVK I ++ +++
Sbjct: 6 VTTGPLDMPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYI---ERGAAIDEN 62
Query: 427 ILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQ 486
+ RE+ L+H ++VR+ + T
Sbjct: 63 VQREIINHRSLRHPNIVRFKEVI-LT---------------------------------- 87
Query: 487 ENKLESTYLYIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543
T+L I MEY +++E + F ++ A F+Q++ G+++ H I HR
Sbjct: 88 -----PTHLAIIMEYASG--GELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHR 140
Query: 544 DLTPNNIFFDA--RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYT 601
DL N D +KI DFG +K + + VGT Y
Sbjct: 141 DLKLENTLLDGSPAPRLKICDFGYSKSSV-----LHSQPKS-----------TVGTPAYI 184
Query: 602 APEIEQGWPKIDEKADMYSLGIVFFEL---WHPF----STAMERQIVLSDLKQKGELPPS 654
APE+ + AD++S G+ + + +PF R+ + L K +P
Sbjct: 185 APEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDD 244
Query: 655 -WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIY 713
++ E L+ R+ P+ R S E+ L +++ ++
Sbjct: 245 IRIS--PECCHLISRIFVADPATRISIPEIKTH---SWFLKNLPADLMNESNTGSQFQEP 299
Query: 714 DKVVSSIFDEETLDMKHHAGTLRLNRDNTSSIQYSDLDTELRDY 757
++ + S+ + + +R + DLD ++ D+
Sbjct: 300 EQPMQSLDTIMQIISEATIPAVRNRCLDDFMTDNLDLDDDMDDF 343
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 4e-36
Identities = 71/320 (22%), Positives = 122/320 (38%), Gaps = 81/320 (25%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI---RLKDKSLPVNDRILREVATLSRLQ 438
+ + LG G FG V C+ G A K I +KDK + + E++ +++L
Sbjct: 90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDK-----EEVKNEISVMNQLD 144
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
H ++++ Y A FE+ + +
Sbjct: 145 HANLIQLYDA-FES---------------------------------------KNDIVLV 164
Query: 499 MEYCP------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
MEY R + + + + + +QI EG+ H+H I+H DL P NI
Sbjct: 165 MEYVDGGELFDRIIDESY----NLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILC 220
Query: 553 DAR--NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610
R IKI DFGLA+ K + + GT + APE+
Sbjct: 221 VNRDAKQIKIIDFGLARRYKPREKLKVN----------------FGTPEFLAPEVVNYDF 264
Query: 611 KIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLL 666
+ DM+S+G++ + L PF + + + + L + +L SE+ + +
Sbjct: 265 -VSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFI 323
Query: 667 RRLMSPSPSDRPSATELLQD 686
+L+ S R SA+E L+
Sbjct: 324 SKLLIKEKSWRISASEALKH 343
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 137 bits (348), Expect = 4e-36
Identities = 67/315 (21%), Positives = 120/315 (38%), Gaps = 80/315 (25%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVK---KIRLKDKSLPVN-DRILREVATLSRLQHQHVVR 444
LG G F V C+ K G+ YA K K RL V+ + I REV L ++H +++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 445 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP- 503
+ FE T + + +E
Sbjct: 73 LHDI-FEN---------------------------------------KTDVVLILELVSG 92
Query: 504 -----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-- 556
+ + ++ A +QI++G+ ++H + I H DL P NI +N
Sbjct: 93 GELFDFLAEK-----ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVP 147
Query: 557 --DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614
IK+ DFG+A ++ ++ GT + APEI P +
Sbjct: 148 NPRIKLIDFGIAHKIEAGNEFKNI----------------FGTPEFVAPEIVNYEP-LGL 190
Query: 615 KADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLM 670
+ADM+S+G++ + L PF +++ + + + + + SE + +RRL+
Sbjct: 191 EADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLL 250
Query: 671 SPSPSDRPSATELLQ 685
P R + + L+
Sbjct: 251 VKDPKRRMTIAQSLE 265
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 137 bits (348), Expect = 4e-36
Identities = 73/324 (22%), Positives = 125/324 (38%), Gaps = 81/324 (25%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVA-TLSRLQ 438
+D E + LG G +G V ++ G+ AVK+IR + R+L ++ ++ +
Sbjct: 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRA-TVNSQEQKRLLMDLDISMRTVD 64
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
V +Y A F +GD ++I
Sbjct: 65 CPFTVTFYGALFR------EGD----------------------------------VWIC 84
Query: 499 MEYCP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG-IIHRDLTPNNIFFD 553
ME + +QV + +++ + IV+ L H+H + +IHRD+ P+N+ +
Sbjct: 85 MELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLIN 144
Query: 554 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI- 612
A +K+ DFG++ L D A D G Y APE
Sbjct: 145 ALGQVKMCDFGISG-----YLVDDVAKDID-----------AGCKPYMAPERINPELNQK 188
Query: 613 --DEKADMYSLGIVFFEL------WHPFSTAME--RQIVLSDLKQKGELPPSWVAKFSEQ 662
K+D++SLGI EL + + T + +Q+V Q LP KFS +
Sbjct: 189 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQ---LPAD---KFSAE 242
Query: 663 -ESLLRRLMSPSPSDRPSATELLQ 685
+ + + +RP+ EL+Q
Sbjct: 243 FVDFTSQCLKKNSKERPTYPELMQ 266
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 138 bits (351), Expect = 4e-36
Identities = 74/313 (23%), Positives = 120/313 (38%), Gaps = 74/313 (23%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKI---RLKDKSLPVN-DRILREVATLSRLQHQHVVR 444
LG G F V C+ K G YA K I R K V+ + I REV+ L +QH +V+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 445 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 504
++ +E T + + +E
Sbjct: 79 LHEV-YEN---------------------------------------KTDVILILELV-- 96
Query: 505 TLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN----D 557
++F+ + +E A +QI+ G+ ++H I H DL P NI RN
Sbjct: 97 AGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR 156
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617
IKI DFGLA + ++ GT + APEI P + +AD
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNI----------------FGTPEFVAPEIVNYEP-LGLEAD 199
Query: 618 MYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPS 673
M+S+G++ + L PF +++ + + E + + S + +RRL+
Sbjct: 200 MWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKD 259
Query: 674 PSDRPSATELLQD 686
P R + + LQ
Sbjct: 260 PKKRMTIQDSLQH 272
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 6e-36
Identities = 64/323 (19%), Positives = 115/323 (35%), Gaps = 80/323 (24%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-Q 438
+ND E L +G G G V + + G AVK++R + N RIL ++ + +
Sbjct: 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRR-SGNKEENKRILMDLDVVLKSHD 82
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
++V+ + + + D ++I
Sbjct: 83 CPYIVQCFGTFIT------NTD----------------------------------VFIA 102
Query: 499 MEYCPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARN 556
ME ++ + + + + IV+ L ++ + G+IHRD+ P+NI D R
Sbjct: 103 MELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG 162
Query: 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI---- 612
IK+ DFG++ +L G Y APE
Sbjct: 163 QIKLCDFGISG-----RLVD-----------DKAKDRSAGCAAYMAPERIDPPDPTKPDY 206
Query: 613 DEKADMYSLGIVFFEL---------WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ- 662
D +AD++SLGI EL + +++ + LP FS
Sbjct: 207 DIRADVWSLGISLVELATGQFPYKNCKTDFEVLT-KVLQEEPPL---LPGH--MGFSGDF 260
Query: 663 ESLLRRLMSPSPSDRPSATELLQ 685
+S ++ ++ RP +LL+
Sbjct: 261 QSFVKDCLTKDHRKRPKYNKLLE 283
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 8e-36
Identities = 66/316 (20%), Positives = 120/316 (37%), Gaps = 80/316 (25%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVK---KIRLKDKSLPVN-DRILREVATLSRLQHQHVVR 444
LG G F V C+ K G YA K K + + V+ + I REV+ L ++ H +V+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 445 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP- 503
+ +E T + + +E
Sbjct: 80 LHDV-YEN---------------------------------------RTDVVLILELVSG 99
Query: 504 -----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-- 556
++ + +E A +QI++G+ ++H + I H DL P NI +N
Sbjct: 100 GELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIP 154
Query: 557 --DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614
IK+ DFGLA ++ ++ GT + APEI P +
Sbjct: 155 IPHIKLIDFGLAHEIEDGVEFKNI----------------FGTPEFVAPEIVNYEP-LGL 197
Query: 615 KADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLM 670
+ADM+S+G++ + L PF +++ + + + + + SE + +R+L+
Sbjct: 198 EADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLL 257
Query: 671 SPSPSDRPSATELLQD 686
R + E L+
Sbjct: 258 VKETRKRLTIQEALRH 273
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 2e-35
Identities = 69/369 (18%), Positives = 133/369 (36%), Gaps = 82/369 (22%)
Query: 333 ASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEEL-QPLGH 391
+ +K + + + +F++ P + D+ ++ + LG
Sbjct: 4 SHHHHHHGSKVRGK--YDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGS 61
Query: 392 GGFGHVVLCKNKLDGRHYAVKKI---RLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 448
G FG V C K GR + K I DK + E++ +++L H ++ + A
Sbjct: 62 GAFGVVHRCVEKATGRVFVAKFINTPYPLDK-----YTVKNEISIMNQLHHPKLINLHDA 116
Query: 449 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT--- 505
FE + + +E+ +
Sbjct: 117 -FED---------------------------------------KYEMVLILEFL--SGGE 134
Query: 506 L--RQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR--NDIKIG 561
L R E Y + E + RQ EGL H+H I+H D+ P NI + + + +KI
Sbjct: 135 LFDRIAAEDYKMSEAE-VINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKII 193
Query: 562 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621
DFGLA L +++ + T + APEI P + DM+++
Sbjct: 194 DFGLATKLNPDEIVKVT----------------TATAEFAAPEIVDREP-VGFYTDMWAI 236
Query: 622 GIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDR 677
G++ + L PF+ + + + + + E + S + + ++ L+ P R
Sbjct: 237 GVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKR 296
Query: 678 PSATELLQD 686
+ + L+
Sbjct: 297 LTVHDALEH 305
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 4e-35
Identities = 68/324 (20%), Positives = 125/324 (38%), Gaps = 93/324 (28%)
Query: 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRY 445
+PLG G F C +K + +AVK I + + +E+ L + H ++V+
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRME-----ANTQKEITALKLCEGHPNIVKL 71
Query: 446 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-- 503
++ F + ++ ME
Sbjct: 72 HEV-FHD---------------------------------------QLHTFLVMELLNGG 91
Query: 504 ----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND-- 557
R ++ HF + A ++ R++V ++H+H G++HRDL P N+ F ND
Sbjct: 92 ELFERIKKKK-----HFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNL 146
Query: 558 -IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKIDE 614
IKI DFG A+ + T T Y APE+ + G+ DE
Sbjct: 147 EIKIIDFGFARLKP----PDNQPLKT-----------PCFTLHYAAPELLNQNGY---DE 188
Query: 615 KADMYSLGIVFFEL---WHPFSTAMERQIVLSDLK-----QKGEL---PPSWVAKFSEQ- 662
D++SLG++ + + PF + S ++ +KG+ +W S++
Sbjct: 189 SCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAW-KNVSQEA 247
Query: 663 ESLLRRLMSPSPSDRPSATELLQD 686
+ L++ L++ P+ R + L +
Sbjct: 248 KDLIQGLLTVDPNKRLKMSGLRYN 271
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 4e-35
Identities = 70/385 (18%), Positives = 134/385 (34%), Gaps = 95/385 (24%)
Query: 354 SSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQ---PLGHGGFGHVVLCKNKLDGRHYA 410
+S S + S+ + FE+L+ +G G FG V + G A
Sbjct: 3 EMNLSLLSARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQV--YHGRWHG-EVA 59
Query: 411 VKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLAS 470
++ I ++ + REV + +H++VV + G
Sbjct: 60 IRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM------GA---------------- 97
Query: 471 STFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVF-ESYDHFDKELAWHLFRQI 528
+ L I C TL V ++ D + ++I
Sbjct: 98 ------------CMSPPH------LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEI 139
Query: 529 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVS 588
V+G+ ++H +GI+H+DL N+F+D + I DFGL + Q +
Sbjct: 140 VKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRR----------E 188
Query: 589 VDGTGQVGTYFYTAPEIEQGWPKI--------DEKADMYSLGIVFFELWH---PFSTAME 637
Q G + APEI + + +D+++LG +++EL PF T
Sbjct: 189 DKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA 248
Query: 638 RQI---VLSDLKQKGELPPSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQDALPP 690
I + + +K L + K + ++ + +RP+ T+L+
Sbjct: 249 EAIIWQMGTGMKP--NLSQIGMGK------EISDILLFCWAFEQEERPTFTKLM------ 294
Query: 691 QMEYELLDNILRMMHSSEDTSIYDK 715
++L+ + + + K
Sbjct: 295 ----DMLEKLPKRNRRLSHPGHFWK 315
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 133 bits (338), Expect = 5e-35
Identities = 52/320 (16%), Positives = 96/320 (30%), Gaps = 79/320 (24%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 439
L L G + K + G VK ++++D S + E L H
Sbjct: 9 FKQLNFLTKLNENHSGEL--WKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
+V+ G + + +
Sbjct: 67 PNVLPVL------GAC--------------------------------QSPPAPHPTLIT 88
Query: 500 EYCPR-TLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQG--IIHRDLTPNNIFFDA 554
+ P +L V + D+ A + G+A +H I L ++ D
Sbjct: 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDE 148
Query: 555 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK--I 612
+I + G++ + APE Q P+
Sbjct: 149 DMTARISMADVKFSF--------------------QSPGRMYAPAWVAPEALQKKPEDTN 188
Query: 613 DEKADMYSLGIVFFELW---HPFS--TAME--RQIVLSDLKQKGELPPSWVAKFSEQESL 665
ADM+S ++ +EL PF+ + ME ++ L L+ +PP S+ L
Sbjct: 189 RRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRP--TIPPGISPHVSK---L 243
Query: 666 LRRLMSPSPSDRPSATELLQ 685
++ M+ P+ RP ++
Sbjct: 244 MKICMNEDPAKRPKFDMIVP 263
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 6e-35
Identities = 77/384 (20%), Positives = 135/384 (35%), Gaps = 96/384 (25%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQHQHVVRYYQ 447
LG G FG V L + + A+K I R K ++ R+ RE++ L L+H H+++ Y
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 448 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLR 507
T T + + +EY L
Sbjct: 77 VI-TT---------------------------------------PTDIVMVIEYAGGELF 96
Query: 508 QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 567
++ F+QI+ + + H I+HRDL P N+ D ++KI DFGL+
Sbjct: 97 DYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSN 156
Query: 568 FLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFE 627
+ T G+ Y APE+ G + D++S GIV +
Sbjct: 157 IMT-----DGNFLKT-----------SCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYV 200
Query: 628 L---WHPFS----TAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPS 679
+ PF + +++ P +++ +SL+RR++ P R +
Sbjct: 201 MLVGRLPFDDEFIPNLFKKV------NSCVYVMPDFLS--PGAQSLIRRMIVADPMQRIT 252
Query: 680 ATELLQD---------ALPPQMEY-------ELLDNILRMMHSSEDTSIYDKVVSSIFDE 723
E+ +D L P E ++ + M SED I + + S +E
Sbjct: 253 IQEIRRDPWFNVNLPDYLRPMEEVQGSYADSRIVSKLGEAMGFSEDY-IVEALRSDENNE 311
Query: 724 ET------LDMKHHAGTLRLNRDN 741
+ + L + +
Sbjct: 312 VKEAYNLLHENQVIQEKLEHHHHH 335
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 7e-35
Identities = 70/350 (20%), Positives = 123/350 (35%), Gaps = 99/350 (28%)
Query: 362 KPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL 421
V S + S ++ + +E + +G G + C +K +AVK I DKS
Sbjct: 3 TVGVHSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKII---DKSK 59
Query: 422 PVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASS 480
E+ L R QH +++ ++
Sbjct: 60 ---RDPTEEIEILLRYGQHPNIITLKDV-YDD---------------------------- 87
Query: 481 ADVTGQENKLESTYLYIQMEYCP------RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534
Y+Y+ E + LRQ F + A + I + + +
Sbjct: 88 -----------GKYVYVVTELMKGGELLDKILRQK-----FFSEREASAVLFTITKTVEY 131
Query: 535 IHGQGIIHRDLTPNNIFFDARND----IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 590
+H QG++HRDL P+NI + + I+I DFG AK L+ E
Sbjct: 132 LHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN-----GLLMTP------ 180
Query: 591 GTGQVGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPF-STAMERQIVLSD 644
T + APE+ QG+ D D++SLG++ + + + PF + + +
Sbjct: 181 ----CYTANFVAPEVLERQGY---DAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILA 233
Query: 645 LKQKGEL---PPSW-----VAKFSEQESLLRRLMSPSPSDRPSATELLQD 686
G+ W AK L+ +++ P R +A +L+
Sbjct: 234 RIGSGKFSLSGGYWNSVSDTAK-----DLVSKMLHVDPHQRLTAALVLRH 278
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 8e-35
Identities = 66/312 (21%), Positives = 123/312 (39%), Gaps = 74/312 (23%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKI---RLKDKSLPVN-DRILREVATLSRLQHQHVVR 444
LG G F V C+ K G YA K I + + V + I REV+ L ++ H +++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 445 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 504
+ +E T + + +E
Sbjct: 80 LHDV-YEN---------------------------------------RTDVVLILELV-- 97
Query: 505 TLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN----D 557
+ ++F+ + +E A +QI++G+ ++H + I H DL P NI +N
Sbjct: 98 SGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPH 157
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617
IK+ DFGLA ++ ++ GT + APEI P + +AD
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNI----------------FGTPEFVAPEIVNYEP-LGLEAD 200
Query: 618 MYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPS 673
M+S+G++ + L PF +++ + + + + ++ SE + +R+L+
Sbjct: 201 MWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKE 260
Query: 674 PSDRPSATELLQ 685
R + E L+
Sbjct: 261 TRKRLTIQEALR 272
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 1e-34
Identities = 67/340 (19%), Positives = 120/340 (35%), Gaps = 88/340 (25%)
Query: 369 SPNMSLPSSRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRI 427
+ + + ++D++ Q LG G G V+ NK +A+K + +
Sbjct: 49 KSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML---QDC----PKA 101
Query: 428 LREVATLSRLQ-HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQ 486
REV R H+VR +E A
Sbjct: 102 RREVELHWRASQCPHIVRIVDV-YENLYA------------------------------- 129
Query: 487 ENKLESTYLYIQMEYCP------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540
L I ME R + +++ + A + + I E + ++H I
Sbjct: 130 ----GRKCLLIVMECLDGGELFSRIQDRGDQAFTERE---ASEIMKSIGEAIQYLHSINI 182
Query: 541 IHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 597
HRD+ P N+ + ++ +K+ DFG AK T
Sbjct: 183 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP----------------CYT 226
Query: 598 YFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL-------WHPFSTAMERQIVLSDLKQK 648
+Y APE+ + + D+ DM+SLG++ + L + A+ + +
Sbjct: 227 PYYVAPEVLGPEKY---DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 283
Query: 649 GELP-PSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQD 686
E P P W ++ SE+ + L+R L+ P+ R + TE +
Sbjct: 284 YEFPNPEW-SEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 133 bits (338), Expect = 1e-34
Identities = 89/350 (25%), Positives = 140/350 (40%), Gaps = 85/350 (24%)
Query: 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL---KDKSLPVNDRILREVATL 434
RY + + LG GG V L ++ + A+K I + + + R REV
Sbjct: 12 RY----KIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEET--LKRFEREVHNS 65
Query: 435 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 494
S+L HQ++V DV +E+
Sbjct: 66 SQLSHQNIVSMI-----------------------------------DV-DEEDDCY--- 86
Query: 495 LYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 553
Y+ MEY TL + ES+ + A + QI++G+ H H I+HRD+ P NI D
Sbjct: 87 -YLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILID 145
Query: 554 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613
+ +KI DFG+AK L L T T V +GT Y +PE +G D
Sbjct: 146 SNKTLKIFDFGIAKALSETSL-------TQTNHV-------LGTVQYFSPEQAKGEA-TD 190
Query: 614 EKADMYSLGIVFFELW---HPFS--TAMERQIVLSDLKQKGELPPSWVAKF--SEQESLL 666
E D+YS+GIV +E+ PF+ TA+ I + ++ + V K +++
Sbjct: 191 ECTDIYSIGIVLYEMLVGEPPFNGETAV--SIAIKHIQDSVPNVTTDVRKDIPQSLSNVI 248
Query: 667 RRLMSPSPSDRP-SATELLQDALPPQMEYELLDNILRMMHSSEDTSIYDK 715
R ++R + E+ D L ++L ++ED DK
Sbjct: 249 LRATEKDKANRYKTIQEMKDD----------LSSVLHENRANEDVYELDK 288
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 134 bits (338), Expect = 1e-34
Identities = 64/342 (18%), Positives = 109/342 (31%), Gaps = 93/342 (27%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
D L+ +G G +G V + G + AVK +D+ + E+ L+H++
Sbjct: 9 DITLLECVGKGRYGEV--WRGSWQGENVAVKIFSSRDEKSWFRET---ELYNTVMLRHEN 63
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
++ + M ST L++ Y
Sbjct: 64 ILGFI------------ASDMTSRH------------------------SSTQLWLITHY 87
Query: 502 CPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ--------GIIHRDLTPNNIFF 552
+L + D + I GLAH+H + I HRDL NI
Sbjct: 88 HEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV 146
Query: 553 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612
I D GLA D +VGT Y APE+ ++
Sbjct: 147 KKNGQCCIADLGLAVMHSQSTNQLDVGN-----------NPRVGTKRYMAPEVLDETIQV 195
Query: 613 D-----EKADMYSLGIVFFELW-------------HPFSTAMERQIVLSDLK----QKG- 649
D ++ D+++ G+V +E+ PF + D++
Sbjct: 196 DCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQ 255
Query: 650 --ELPPSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQ 685
+P W + + L +LM +PS R +A + +
Sbjct: 256 RPNIPNRWFS--DPTLTSLAKLMKECWYQNPSARLTALRIKK 295
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 2e-34
Identities = 71/313 (22%), Positives = 120/313 (38%), Gaps = 84/313 (26%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQHQHVVRYYQ 447
LG G FG V + +++L G AVK + R K +SL V +I RE+ L +H H+++ YQ
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 448 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLR 507
T T ++ MEY
Sbjct: 79 VI-ST---------------------------------------PTDFFMVMEYVSGG-- 96
Query: 508 QVFESYDH------FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 561
E +D+ ++ A LF+QI+ + + H ++HRDL P N+ DA + KI
Sbjct: 97 ---ELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIA 153
Query: 562 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621
DFGL+ + T G+ Y APE+ G + D++S
Sbjct: 154 DFGLSNMMS-----DGEFLRT-----------SCGSPNYAAPEVISGRLYAGPEVDIWSC 197
Query: 622 GIVFFELWH---PFS----TAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPS 673
G++ + L PF + ++I + G P ++ +LL ++
Sbjct: 198 GVILYALLCGTLPFDDEHVPTLFKKI------RGGVFYIPEYLN--RSVATLLMHMLQVD 249
Query: 674 PSDRPSATELLQD 686
P R + ++ +
Sbjct: 250 PLKRATIKDIREH 262
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 134 bits (338), Expect = 2e-34
Identities = 75/363 (20%), Positives = 120/363 (33%), Gaps = 97/363 (26%)
Query: 364 SVDSGSPNMSLPSSRYLNDFEELQ---PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS 420
S SGS LP +++Q +G G +G V K G AVK +++
Sbjct: 18 SQSSGS-GSGLPLLVQRTIAKQIQMVKQIGKGRYGEV--WMGKWRGEKVAVKVFFTTEEA 74
Query: 421 LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASS 480
+ E+ ++H++++ + AD G W
Sbjct: 75 SWFRET---EIYQTVLMRHENILGFI------A-ADIKGTGSW----------------- 107
Query: 481 ADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ- 538
T LY+ +Y +L +S D + L V GL H+H +
Sbjct: 108 ------------TQLYLITDYHENGSLYDYLKSTT-LDAKSMLKLAYSSVSGLCHLHTEI 154
Query: 539 -------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG 591
I HRDL NI I D GLA F +DT V +
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVK-----------FISDTNEVDIPP 203
Query: 592 TGQVGTYFYTAPEIEQGWPKI-----DEKADMYSLGIVFFELW-------------HPFS 633
+VGT Y PE+ ADMYS G++ +E+ P+
Sbjct: 204 NTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH 263
Query: 634 TAMERQIVLSDLK----QKG---ELPPSWVAKFSEQESLLRRLM----SPSPSDRPSATE 682
+ D++ K P W + E + +LM + +P+ R +A
Sbjct: 264 DLVPSDPSYEDMREIVCIKKLRPSFPNRWSSD--ECLRQMGKLMTECWAHNPASRLTALR 321
Query: 683 LLQ 685
+ +
Sbjct: 322 VKK 324
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 4e-34
Identities = 67/372 (18%), Positives = 120/372 (32%), Gaps = 97/372 (26%)
Query: 355 SRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQ---PLGHGGFGHVVLCKNKLDGRHYAV 411
+ + SGS LP + +G G FG V + K G AV
Sbjct: 14 TTLKDLIYDMTTSGS-GSGLPLLVQRTIARTIVLQESIGKGRFGEV--WRGKWRGEEVAV 70
Query: 412 KKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASS 471
K +++ + E+ L+H++++ + +GT
Sbjct: 71 KIFSSREER---SWFREAEIYQTVMLRHENILGFI------------AADNKDNGT---- 111
Query: 472 TFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVE 530
T L++ +Y +L Y E L
Sbjct: 112 --------------------WTQLWLVSDYHEHGSLFDYLNRYT-VTVEGMIKLALSTAS 150
Query: 531 GLAHIHGQ--------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPT 582
GLAH+H + I HRDL NI I D GLA D A
Sbjct: 151 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA--- 207
Query: 583 DTGGVSVDGTGQVGTYFYTAPEIEQGWPKI-----DEKADMYSLGIVFFELW-------- 629
+VGT Y APE+ + ++AD+Y++G+VF+E+
Sbjct: 208 --------PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 259
Query: 630 -----HPFSTAMERQIVLSDLK----QKG---ELPPSWVAKFSEQESLLRRLM----SPS 673
P+ + + +++ ++ +P W + E ++ ++M +
Sbjct: 260 HEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQS--CEALRVMAKIMRECWYAN 317
Query: 674 PSDRPSATELLQ 685
+ R +A + +
Sbjct: 318 GAARLTALRIKK 329
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 8e-34
Identities = 71/344 (20%), Positives = 124/344 (36%), Gaps = 82/344 (23%)
Query: 366 DSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND 425
S + +R +D+E + +G G V A+K+I L +K D
Sbjct: 2 SEDSSALPWSINR--DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINL-EKCQTSMD 58
Query: 426 RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTG 485
+L+E+ +S+ H ++V YY ++ D +W
Sbjct: 59 ELLKEIQAMSQCHHPNIVSYYTSFV-------VKDELW---------------------- 89
Query: 486 QENKLESTYLYIQMEYCP---------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536
+ M+ + + D+ + R+++EGL ++H
Sbjct: 90 -----------LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH 138
Query: 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ-- 594
G IHRD+ NI ++I DFG+ +AF G ++ + +
Sbjct: 139 KNGQIHRDVKAGNILLGEDGSVQIADFGV------------SAFLATGGDITRNKVRKTF 186
Query: 595 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL---------WHP----FSTAMERQIV 641
VGT + APE+ + D KAD++S GI EL + P T
Sbjct: 187 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS 246
Query: 642 LSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685
L Q E+ + F + ++ + P RP+A ELL+
Sbjct: 247 LETGVQDKEMLKKYGKSFRK---MISLCLQKDPEKRPTAAELLR 287
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 1e-33
Identities = 74/356 (20%), Positives = 130/356 (36%), Gaps = 92/356 (25%)
Query: 363 PSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP 422
VD G+ N+ + + +E L +G G +G V+ C+NK GR A+KK D
Sbjct: 10 SGVDLGTENLY---FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKM 66
Query: 423 VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSAD 482
V +RE+ L +L+H+++V +
Sbjct: 67 VKKIAMREIKLLKQLRHENLVNLL-----------------------------------E 91
Query: 483 VTGQENKLESTYLYIQMEYCPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGII 541
V ++ + Y+ E+ T+ E + + D ++ QI+ G+ H II
Sbjct: 92 VCKKKKRW-----YLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNII 146
Query: 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYT 601
HRD+ P NI +K+ DFG A+ L A P + +V T +Y
Sbjct: 147 HRDIKPENILVSQSGVVKLCDFGFARTL---------AAPGEV------YDDEVATRWYR 191
Query: 602 APEIEQGWPKIDEKADMYSLGIVFFELWH-----PFSTAMERQIVL-------------- 642
APE+ G K + D++++G + E++ P + ++ Q+
Sbjct: 192 APELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID-QLYHIMMCLGNLIPRHQE 250
Query: 643 --SDLKQ-KGELPPSWVAKFSEQE----------SLLRRLMSPSPSDRPSATELLQ 685
+ G P + + L ++ + P RP ELL
Sbjct: 251 LFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306
|
| >3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP} Length = 465 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 5e-33
Identities = 72/483 (14%), Positives = 157/483 (32%), Gaps = 91/483 (18%)
Query: 747 YSDLDTELRDYVVQVTKEMFRQHCAKHLE---IEPMYLL------GDCPQFK-------- 789
+ + L Y++ + ++ + +E +E + +L GD +
Sbjct: 21 FLPSEKRLELYLLDTIRRVYESYGFTPIETPAVERLEVLQAKGNQGDNIIYGLEPILPPN 80
Query: 790 --RNTVKLLTHGGDLLELSHELRLPFIRWAISNQKS---SFKRYEISSVYRRAIGHSP-P 843
K G + L + +P + + F RY++ V+R
Sbjct: 81 RQAEKDKSGDTGSEARALKFDQTVPLAAYIARHLNDLTFPFARYQMDVVFRG---ERAKD 137
Query: 844 NRY---LQGDFDIIG--GASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSW 898
R+ Q D D++G S L +A++ + +I + I +N+ +L +
Sbjct: 138 GRFRQFRQCDIDVVGREKLSLLYDAQMPAIITEIFEA-VNIGDFVIRINNRKVLTGFFQS 196
Query: 899 AGIKAEHREKVAELLAM-----MGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQT 953
I + + + +G V + L++ + ++
Sbjct: 197 LNISETQIKSC--ISIIDNLEKIG--------EAK--V---KLELEKEGINPEQTQKIID 241
Query: 954 VGLRFCGAADQALPRLR---GALPADKPTRKALDEL-----YLRIWRI-EKNIYIDA--- 1001
++ G+ D L +L+ LP + + EL +R + +K ID
Sbjct: 242 F-VKIDGSVDDVLDKLKHLSQTLPESEQFNLGVSELETVITGVRNLGVPDKRFCIDLAIA 300
Query: 1002 --LMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRT 1059
L +Y+ ++ + + GGRY+ L+ +
Sbjct: 301 RGL-----NYYTGTVYETTLIGH------EALGSICSGGRYEELVGTFIGEKM------- 342
Query: 1060 NPPSGVGASLALETIIQH-YPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEEN 1118
GVG S+ L +I V+V + L+ +++ +L +
Sbjct: 343 ---PGVGISIGLTRLISRLLKAGILNTLPPTPAQVVVVN-MQDELMPTYLKVSQQLRQAG 398
Query: 1119 IKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLV 1178
+ L +Q++ A + I+ VI+ A ++ L ++ EV L
Sbjct: 399 LNVITNFEK-RQLGKQFQAADKQGIRFCVIIGADEAAAQKSSLKDLQSGEQVEVALADLA 457
Query: 1179 RFL 1181
+
Sbjct: 458 EEI 460
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 8e-33
Identities = 87/442 (19%), Positives = 149/442 (33%), Gaps = 107/442 (24%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQHQHVVRYYQ 447
LG G FG V + K++L G AVK + R K +SL V +I RE+ L +H H+++ YQ
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 448 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLR 507
T + +++ MEY
Sbjct: 84 VI-ST---------------------------------------PSDIFMVMEYVSGG-- 101
Query: 508 QVFESYDHFDK------ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 561
E +D+ K + + LF+QI+ G+ + H ++HRDL P N+ DA + KI
Sbjct: 102 ---ELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIA 158
Query: 562 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621
DFGL+ + T G+ Y APE+ G + D++S
Sbjct: 159 DFGLSNMMS-----DGEFLRT-----------SCGSPNYAAPEVISGRLYAGPEVDIWSS 202
Query: 622 GIVFFELWH---PFS----TAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPS 673
G++ + L PF + ++I G P ++ SLL+ ++
Sbjct: 203 GVILYALLCGTLPFDDDHVPTLFKKI------CDGIFYTPQYLN--PSVISLLKHMLQVD 254
Query: 674 PSDRPSATELLQD----------ALPPQMEY-------ELLDNILRMMHSSEDTSIYDKV 716
P R + ++ + P Y E L + SE+ +
Sbjct: 255 PMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEVCEKFECSEEEVLSCLY 314
Query: 717 VSSIFDEET------LDMKHHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHC 770
+ D +D + + TS D L + + +
Sbjct: 315 NRNHQDPLAVAYHLIIDNRRIMNEAKDFYLATSPPDSFLDDHHLTRPHPERVPFLVAETP 374
Query: 771 AKHLEIEPMYLLGDCPQFKRNT 792
++ + Q R
Sbjct: 375 RARHTLDELNPQKSKHQGVRKA 396
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 8e-33
Identities = 66/315 (20%), Positives = 107/315 (33%), Gaps = 58/315 (18%)
Query: 382 DFEEL---QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 438
+L + LG G FG K + L L+EV + L+
Sbjct: 8 RPSDLIHGEVLGKGCFGQA--IKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLE 65
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
H +V+++ GV + + L
Sbjct: 66 HPNVLKFI------GV----------------------------LYKDKR------LNFI 85
Query: 499 MEYCPR-TLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 556
EY TLR + +S D + + I G+A++H IIHRDL +N
Sbjct: 86 TEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENK 145
Query: 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616
++ + DFGLA+ + ++ Q + VG ++ APE+ G DEK
Sbjct: 146 NVVVADFGLARLMV-DEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRS-YDEKV 203
Query: 617 DMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKG---ELPPSWVAKFSEQESLLRRLM 670
D++S GIV E+ + + R + + PP+ F + R
Sbjct: 204 DVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFP---ITVRCC 260
Query: 671 SPSPSDRPSATELLQ 685
P RPS +L
Sbjct: 261 DLDPEKRPSFVKLEH 275
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 1e-32
Identities = 64/328 (19%), Positives = 113/328 (34%), Gaps = 85/328 (25%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRIL-----REVATL 434
N+ E + +G GGFG V + D A+K + L D REV +
Sbjct: 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIM 77
Query: 435 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 494
S L H ++V+ Y G+ +
Sbjct: 78 SNLNHPNIVKLY------GL----------------------------MHNP-------- 95
Query: 495 LYIQMEYCPR-TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQG--IIHRDLTPNNI 550
+ ME+ P L H + L I G+ ++ Q I+HRDL NI
Sbjct: 96 PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNI 155
Query: 551 FFDARND-----IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 605
F + ++ K+ DFGL++ +G +G + + APE
Sbjct: 156 FLQSLDENAPVCAKVADFGLSQQ------------------SVHSVSGLLGNFQWMAPET 197
Query: 606 EQGWPKI-DEKADMYSLGIVFFELW---HPFSTAMERQI-VLSDLKQKG---ELPPSWVA 657
+ EKAD YS ++ + + PF +I ++ ++++G +P
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPP 257
Query: 658 KFSEQESLLRRLMSPSPSDRPSATELLQ 685
+ ++ S P RP + +++
Sbjct: 258 RLRN---VIELCWSGDPKKRPHFSYIVK 282
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 1e-32
Identities = 67/340 (19%), Positives = 122/340 (35%), Gaps = 91/340 (26%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 439
+ +E++ +G G +G V C+N+ G+ A+KK + + LRE+ L +L+H
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
++V +V ++ +L ++
Sbjct: 62 PNLVNLL-----------------------------------EVFRRKRRL-----HLVF 81
Query: 500 EYCPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
EYC T+ + Y + L + Q ++ + H IHRD+ P NI + I
Sbjct: 82 EYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVI 141
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPEIEQGWPKIDEKAD 617
K+ DFG A+ L D +V T +Y +PE+ G + D
Sbjct: 142 KLCDFGFARLL----------------TGPSDYYDDEVATRWYRSPELLVGDTQYGPPVD 185
Query: 618 MYSLGIVFFELWH-----PFSTAMERQIVL----------------SDLKQ-KGELPPSW 655
++++G VF EL P + ++ Q+ L S + G P
Sbjct: 186 VWAIGCVFAELLSGVPLWPGKSDVD-QLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDP 244
Query: 656 VAKFSEQE----------SLLRRLMSPSPSDRPSATELLQ 685
+ LL+ + P++R + +LL
Sbjct: 245 EDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 2e-32
Identities = 68/327 (20%), Positives = 113/327 (34%), Gaps = 88/327 (26%)
Query: 382 DFEELQ---PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN--DRILREVATLSR 436
DF EL +G GGFG V + G AVK R + + +E +
Sbjct: 5 DFAELTLEEIIGIGGFGKV--YRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAM 62
Query: 437 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 496
L+H +++ GV + N L
Sbjct: 63 LKHPNIIALR------GV----------------------------CLKEPN------LC 82
Query: 497 IQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG---IIHRDLTPNNIFF 552
+ ME+ L +V ++ + QI G+ ++H + IIHRDL +NI
Sbjct: 83 LVMEFARGGPLNRVLSG-KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILI 141
Query: 553 D--------ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 604
+ +KI DFGLA+ G Y + APE
Sbjct: 142 LQKVENGDLSNKILKITDFGLAREWH-----------------RTTKMSAAGAYAWMAPE 184
Query: 605 IEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKG---ELPPSWVAK 658
+ + + +D++S G++ +EL PF ++ V + +P +
Sbjct: 185 VIRASM-FSKGSDVWSYGVLLWELLTGEVPFRG-IDGLAVAYGVAMNKLALPIPSTCPEP 242
Query: 659 FSEQESLLRRLMSPSPSDRPSATELLQ 685
F++ L+ +P P RPS T +L
Sbjct: 243 FAK---LMEDCWNPDPHSRPSFTNILD 266
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 2e-32
Identities = 69/321 (21%), Positives = 107/321 (33%), Gaps = 75/321 (23%)
Query: 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL---KDKSLPVNDRILREVATL 434
Y + +G GG G V ++ + R A+K + D R+ RE T
Sbjct: 35 PY----RLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVF--RTRMQREARTA 88
Query: 435 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 494
RLQ HVV + D G+ +
Sbjct: 89 GRLQEPHVVPIH-----------------------------------DF-GEIDGQ---- 108
Query: 495 LYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 553
LY+ M L + A + RQI L H G HRD+ P NI
Sbjct: 109 LYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVS 168
Query: 554 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613
A + + DFG+A T G VGT +Y APE
Sbjct: 169 ADDFAYLVDFGIASAT-------TDEKLTQLGNT-------VGTLYYMAPERFSESH-AT 213
Query: 614 EKADMYSLGIVFFEL---WHPF---STAMERQIVLSDLKQKGELPPSWVAKFSEQESLLR 667
+AD+Y+L V +E P+ ++ + + + + P F ++++
Sbjct: 214 YRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAF---DAVIA 270
Query: 668 RLMSPSPSDR-PSATELLQDA 687
R M+ +P DR + +L A
Sbjct: 271 RGMAKNPEDRYVTCGDLSAAA 291
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 2e-32
Identities = 66/360 (18%), Positives = 117/360 (32%), Gaps = 95/360 (26%)
Query: 372 MSLPSSRYLNDFEELQ---PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRIL 428
M +S D + L+ +G G +G V K LD R AVK ++ +N++
Sbjct: 1 MEAAASEPSLDLDNLKLLELIGRGRYGAV--YKGSLDERPVAVKVFSFANRQNFINEK-- 56
Query: 429 REVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQEN 488
+ + ++H ++ R+ +
Sbjct: 57 -NIYRVPLMEHDNIARFI------------VGDERVTADG-------------------- 83
Query: 489 KLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ--------- 538
+ MEY P +L + + D + L + GLA++H +
Sbjct: 84 ---RMEYLLVMEYYPNGSLXKYLSLHT-SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKP 139
Query: 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTY 598
I HRDL N+ I DFGL+ L G +VGT
Sbjct: 140 AISHRDLNSRNVLVKNDGTCVISDFGLSMRL-------TGNRLVRPGEEDNAAISEVGTI 192
Query: 599 FYTAPEI------EQGWPKIDEKADMYSLGIVFFELW------HPFSTAMERQIVLSDL- 645
Y APE+ + ++ DMY+LG++++E++ P + E Q+
Sbjct: 193 RYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEV 252
Query: 646 ----------------KQKGELPPSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQ 685
KQ+ + P +W + S L+ + R +A +
Sbjct: 253 GNHPTFEDMQVLVSREKQRPKFPEAW-KENSLAVRSLKETIEDCWDQDAEARLTAQXAEE 311
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 4e-32
Identities = 84/354 (23%), Positives = 140/354 (39%), Gaps = 98/354 (27%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
F +L+ +G G FG V + + A+K I L++ + D I +E+ LS+ +
Sbjct: 23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIED-IQQEITVLSQCDSPY 81
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
V +YY ++ + +W I MEY
Sbjct: 82 VTKYYGSYLK-------DTKLW---------------------------------IIMEY 101
Query: 502 C----------PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 551
P L + + + R+I++GL ++H + IHRD+ N+
Sbjct: 102 LGGGSALDLLEPGPLDETQIAT----------ILREILKGLDYLHSEKKIHRDIKAANVL 151
Query: 552 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWP 610
++K+ DFG+A L + + F VGT F+ APE I+Q
Sbjct: 152 LSEHGEVKLADFGVAGQLT-DTQIKRNTF--------------VGTPFWMAPEVIKQS-- 194
Query: 611 KIDEKADMYSLGIVFFELWH---PFST--AMERQIVLSDLKQKGELPPSWVAKFSEQ-ES 664
D KAD++SLGI EL P S M+ VL + + PP+ +S+ +
Sbjct: 195 AYDSKADIWSLGITAIELARGEPPHSELHPMK---VLFLIPKNN--PPTLEGNYSKPLKE 249
Query: 665 LLRRLMSPSPSDRPSATELLQ------DALPPQMEYELLD--NILRMMHSSEDT 710
+ ++ PS RP+A ELL+ +A EL+D + S +D+
Sbjct: 250 FVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWKAEQSHDDS 303
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 4e-32
Identities = 56/315 (17%), Positives = 101/315 (32%), Gaps = 79/315 (25%)
Query: 378 RYLNDFEELQPLGHGGFGHVVLCK-NKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR 436
+Y E + HGG G + L ++GR +K + + + E L+
Sbjct: 81 QY----EVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQ-AMAMAERQFLAE 135
Query: 437 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 496
+ H +V+ + + ++ Y
Sbjct: 136 VVHPSIVQIF-----------------------------------NFVEHTDRHGDPVGY 160
Query: 497 IQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 555
I MEY ++L++ A +I+ L+++H G+++ DL P NI
Sbjct: 161 IVMEYVGGQSLKRSKG--QKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT-E 217
Query: 556 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615
+K+ D G + G + GT + APEI + P
Sbjct: 218 EQLKLIDLGAVSRI------------NSFGYL-------YGTPGFQAPEIVRTGP--TVA 256
Query: 616 ADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 672
D+Y++G L + + D + S+ LLRR + P
Sbjct: 257 TDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDP--VLKTYDSY-------GRLLRRAIDP 307
Query: 673 SPSDRP-SATELLQD 686
P R +A E+
Sbjct: 308 DPRQRFTTAEEMSAQ 322
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 128 bits (322), Expect = 5e-32
Identities = 69/328 (21%), Positives = 124/328 (37%), Gaps = 78/328 (23%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 439
+DFE++ LG G G V +K G A K I L+ K + ++I+RE+ L
Sbjct: 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQVLHECNS 90
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
++V +Y A++ G + I M
Sbjct: 91 PYIVGFYGAFYSDG----------------------------------------EISICM 110
Query: 500 EYCPRT-LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG-IIHRDLTPNNIFFDARND 557
E+ L QV + +++ + +++GL ++ + I+HRD+ P+NI ++R +
Sbjct: 111 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 170
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617
IK+ DFG++ L D+ S VGT Y +PE QG ++D
Sbjct: 171 IKLCDFGVSGQL------------IDSMANSF-----VGTRSYMSPERLQG-THYSVQSD 212
Query: 618 MYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 674
++S+G+ E+ +P + + + E
Sbjct: 213 IWSMGLSLVEMAVGRYPIPPP--------------DAKELELMFGCQVEGDAAETPPRPR 258
Query: 675 SDRPSATELLQDALPPQMEYELLDNILR 702
+ + D+ PP +ELLD I+
Sbjct: 259 TPGRPLNKFGMDSRPPMAIFELLDYIVN 286
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 127 bits (320), Expect = 3e-31
Identities = 58/251 (23%), Positives = 95/251 (37%), Gaps = 61/251 (24%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+ + + +G+G FG V K G A+KK+ + RE+ + +L H ++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNI 109
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
VR ++ +G K + YL + ++Y
Sbjct: 110 VRLRYFFYSSG----------------------------------EKKDEVYLNLVLDYV 135
Query: 503 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
P T+ +V Y + L + Q+ LA+IH GI HRD+ P N+ D +
Sbjct: 136 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 195
Query: 559 -KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617
K+ DFG AK QL + + + +Y APE+ G D
Sbjct: 196 LKLCDFGSAK-----QLVRGEPN-----------VSYICSRYYRAPELIFGATDYTSSID 239
Query: 618 MYSLGIVFFEL 628
++S G V EL
Sbjct: 240 VWSAGCVLAEL 250
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 3e-31
Identities = 75/367 (20%), Positives = 124/367 (33%), Gaps = 111/367 (30%)
Query: 364 SVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV 423
VD G+ N+ S + L+ G FG V K +L + AVK ++DK
Sbjct: 11 GVDLGTENLYFQS----MPLQLLEVKARGRFGCV--WKAQLLNEYVAVKIFPIQDKQSWQ 64
Query: 424 NDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADV 483
N+ EV +L ++H++++++ G G+
Sbjct: 65 NEY---EVYSLPGMKHENILQFI------------GAEKRGTSV---------------- 93
Query: 484 TGQENKLESTYLYIQMEYCPR-TLRQVFESYDH-FDKELAWHLFRQIVE----GLAHIHG 537
L++ + + +L D ++W+ I E GLA++H
Sbjct: 94 --------DVDLWLITAFHEKGSL------SDFLKANVVSWNELCHIAETMARGLAYLHE 139
Query: 538 Q----------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGV 587
I HRD+ N+ I DFGLA + G
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF-------------EAGKS 186
Query: 588 SVDGTGQVGTYFYTAPEIEQGWPKI----DEKADMYSLGIVFFELW-------------- 629
+ D GQVGT Y APE+ +G + DMY++G+V +EL
Sbjct: 187 AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYM 246
Query: 630 HPFSTAMERQIVLSDLK----QKG---ELPPSWVAKFSEQESLLRRLM----SPSPSDRP 678
PF + + L D++ K L W ++L + R
Sbjct: 247 LPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQK--HAGMAMLCETIEECWDHDAEARL 304
Query: 679 SATELLQ 685
SA + +
Sbjct: 305 SAGCVGE 311
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 4e-31
Identities = 78/363 (21%), Positives = 135/363 (37%), Gaps = 95/363 (26%)
Query: 367 SGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR 426
S +L + +++L+ +G G +G V K+ GR A+K+IRL + +
Sbjct: 7 HSSGRENLYFQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPST 65
Query: 427 ILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQ 486
+RE++ L L H ++V DV
Sbjct: 66 AIREISLLKELHHPNIVSLI-----------------------------------DVIHS 90
Query: 487 ENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDL 545
E L + E+ + L++V + Q++ G+AH H I+HRDL
Sbjct: 91 ERCL-----TLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDL 145
Query: 546 TPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPE 604
P N+ ++ +K+ DFGLA+ AF G+ V T +V T +Y AP+
Sbjct: 146 KPQNLLINSDGALKLADFGLAR-----------AF-----GIPVRSYTHEVVTLWYRAPD 189
Query: 605 IEQGWPKIDEKADMYSLGIVFFELWH-----PFSTAMERQIVL----------------S 643
+ G K D++S+G +F E+ P T + Q+
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSILGTPNPREWPQVQ 248
Query: 644 DLKQ-KGELPPSW--------VAKFSEQ-ESLLRRLMSPSPSDRPSATELLQ----DALP 689
+L K + + F ++ LL ++ P+ R SA + + L
Sbjct: 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308
Query: 690 PQM 692
PQ+
Sbjct: 309 PQI 311
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 5e-31
Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 58/251 (23%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 439
+ +E+L+ +G G +G V KN+ A+K++RL D V LRE+ L L+H
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
+++VR + DV + KL +
Sbjct: 61 KNIVRLH-----------------------------------DVLHSDKKL-----TLVF 80
Query: 500 EYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
E+C + L++ F+S D E+ Q+++GL H + ++HRDL P N+ + ++
Sbjct: 81 EFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGEL 140
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPEIEQGWPKIDEKAD 617
K+ +FGLA+ AF G+ V + +V T +Y P++ G D
Sbjct: 141 KLANFGLAR-----------AF-----GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSID 184
Query: 618 MYSLGIVFFEL 628
M+S G +F EL
Sbjct: 185 MWSAGCIFAEL 195
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 8e-31
Identities = 44/360 (12%), Positives = 94/360 (26%), Gaps = 88/360 (24%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVAT-L 434
LG G F V + + + +K + P I ++ L
Sbjct: 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQ---KPANPWEFYIGTQLMERL 121
Query: 435 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 494
+++Y A
Sbjct: 122 KPSMQHMFMKFYSA-HLF---------------------------------------QNG 141
Query: 495 LYIQMEYCPR-TLRQVFESYDH-----FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 548
+ E TL Y + + L +++ + +H IIH D+ P+
Sbjct: 142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPD 201
Query: 549 NIFF-----------DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 597
N D + + D G + +KL + F T + T
Sbjct: 202 NFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKL--FPKGTIF-----------TAKCET 248
Query: 598 YFYTAPEI--EQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSW 655
+ E+ + W + + D + + + + F T M+ + + K +G
Sbjct: 249 SGFQCVEMLSNKPW---NYQIDYFGVAATVYCML--FGTYMKVKNEGGECKPEGLFRRLP 303
Query: 656 VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIYDK 715
+++ + +LL+ L + + I + + + K
Sbjct: 304 --HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHYTNKIRALRNRLIVLLLECK 361
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 1e-30
Identities = 55/263 (20%), Positives = 102/263 (38%), Gaps = 62/263 (23%)
Query: 373 SLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVA 432
+ PS+ ++ + + LG G +G V + + A+K+IRL+ + V +REV+
Sbjct: 26 AAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVS 85
Query: 433 TLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLES 492
L LQH++++ V ++L
Sbjct: 86 LLKELQHRNIIELK-----------------------------------SVIHHNHRL-- 108
Query: 493 TYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
++ EY L++ + + Q++ G+ H + +HRDL P N+
Sbjct: 109 ---HLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLL 165
Query: 553 DARND-----IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPEIE 606
+ +KIGDFGLA+ AF G+ + T ++ T +Y PEI
Sbjct: 166 SVSDASETPVLKIGDFGLAR-----------AF-----GIPIRQFTHEIITLWYRPPEIL 209
Query: 607 QGWPKIDEKADMYSLGIVFFELW 629
G D++S+ ++ E+
Sbjct: 210 LGSRHYSTSVDIWSIACIWAEML 232
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 1e-30
Identities = 72/338 (21%), Positives = 120/338 (35%), Gaps = 91/338 (26%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+ + +G+G FG V K A+KK+ DK RE+ + ++H +V
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQ-DK-----RFKNRELQIMRIVKHPNV 94
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
V ++ G +K + +L + +EY
Sbjct: 95 VDLKAFFYSNG----------------------------------DKKDEVFLNLVLEYV 120
Query: 503 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARND- 557
P T+ + Y + + L + Q++ LA+IH GI HRD+ P N+ D +
Sbjct: 121 PETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGV 180
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617
+K+ DFG AK L + + + +Y APE+ G D
Sbjct: 181 LKLIDFGSAKILI----------AGEP------NVSYICSRYYRAPELIFGATNYTTNID 224
Query: 618 MYSLGIVFFELW--HP-FS----------------TAMERQI-VLSDLKQKGELPP---- 653
++S G V EL P F T QI ++ + + P
Sbjct: 225 IWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPH 284
Query: 654 SWVAKFSEQES-----LLRRLMSPSPSDRPSATELLQD 686
+ F + L+ RL+ +PS R +A E L
Sbjct: 285 PFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 121 bits (307), Expect = 2e-30
Identities = 76/344 (22%), Positives = 123/344 (35%), Gaps = 106/344 (30%)
Query: 363 PSVDSGSPNMSLPSSRY----LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR--- 415
P +GS + P + DF+ + LG G F VVL + R YA+K +
Sbjct: 8 PRPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH 67
Query: 416 -LKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFS 474
+K+ + + RE +SRL H V+ Y F+
Sbjct: 68 IIKENKV---PYVTRERDVMSRLDHPFFVKLYFT-FQD---------------------- 101
Query: 475 NRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFR-------- 526
LY + Y + EL ++ +
Sbjct: 102 -----------------DEKLYFGLSYAK-------------NGELLKYIRKIGSFDETC 131
Query: 527 ------QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAF 580
+IV L ++HG+GIIHRDL P NI + I+I DFG AK +
Sbjct: 132 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK----VLSPESKQA 187
Query: 581 PTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPFSTA 635
++ VGT Y +PE+ E+ K +D+++LG + ++L PF
Sbjct: 188 RANSF---------VGTAQYVSPELLTEKSACK---SSDLWALGCIIYQLVAGLPPFRAG 235
Query: 636 MERQIVLSDLKQKGELPP--SWVAKFSEQESLLRRLMSPSPSDR 677
E I +K + + P A+ L+ +L+ + R
Sbjct: 236 NEYLIFQKIIKLEYDFPEKFFPKAR-----DLVEKLLVLDATKR 274
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 2e-30
Identities = 76/364 (20%), Positives = 132/364 (36%), Gaps = 95/364 (26%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR-ILREVATLSRLQHQH 441
F +L+ +GHG FG V ++ + A+KK+ K + I++EV L +L+H +
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
++Y + + W + MEY
Sbjct: 116 TIQYRGCYLR-------EHTAW---------------------------------LVMEY 135
Query: 502 CPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 560
C + + E + + + ++GLA++H +IHRD+ NI +K+
Sbjct: 136 CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKL 195
Query: 561 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI--DEKADM 618
GDFG A + +F VGT ++ APE+ + D K D+
Sbjct: 196 GDFGSA-----SIMAPANSF--------------VGTPYWMAPEVILAMDEGQYDGKVDV 236
Query: 619 YSLGIVFFEL---------WHPFSTAMERQIVLSDLKQKGELPPS-----WVAKFSEQES 664
+SLGI EL + S L + Q P+ W F
Sbjct: 237 WSLGITCIELAERKPPLFNMNAMS-------ALYHIAQNE--SPALQSGHWSEYFRN--- 284
Query: 665 LLRRLMSPSPSDRPSATELLQ-----DALPPQMEYELLDNILRMMHSSEDTSIYDKVVSS 719
+ + P DRP++ LL+ PP + +L+ + ++ Y K+
Sbjct: 285 FVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVRELDNLQ-YRKMKKI 343
Query: 720 IFDE 723
+F E
Sbjct: 344 LFQE 347
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 3e-30
Identities = 59/261 (22%), Positives = 103/261 (39%), Gaps = 59/261 (22%)
Query: 375 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATL 434
S + ++ F+ + G G FG V L K K G A+KK+ D +R L+ + L
Sbjct: 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQ-DPRF--RNRELQIMQDL 73
Query: 435 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 494
+ L H ++V+ ++ G D D+ Y
Sbjct: 74 AVLHHPNIVQLQSYFYTLGERDRR-----------------------DI----------Y 100
Query: 495 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIH--GQGIIHRDLTPN 548
L + MEY P TL + +Y L + Q++ + +H + HRD+ P+
Sbjct: 101 LNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPH 160
Query: 549 NIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607
N+ + + +K+ DFG AK L P++ + + +Y APE+
Sbjct: 161 NVLVNEADGTLKLCDFGSAKKL----------SPSEP------NVAYICSRYYRAPELIF 204
Query: 608 GWPKIDEKADMYSLGIVFFEL 628
G D++S+G +F E+
Sbjct: 205 GNQHYTTAVDIWSVGCIFAEM 225
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 121 bits (307), Expect = 4e-30
Identities = 74/348 (21%), Positives = 121/348 (34%), Gaps = 91/348 (26%)
Query: 372 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP---VNDRIL 428
M+L +E+L LG G F V ++K + A+KKI+L +S +N L
Sbjct: 1 MALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL 60
Query: 429 REVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQEN 488
RE+ L L H +++ D G ++
Sbjct: 61 REIKLLQELSHPNIIGLL-----------------------------------DAFGHKS 85
Query: 489 KLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTP 547
+ + ++ L + + ++GL ++H I+HRDL P
Sbjct: 86 NI-----SLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKP 140
Query: 548 NNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPEIE 606
NN+ D +K+ DFGLAK +F G T QV T +Y APE+
Sbjct: 141 NNLLLDENGVLKLADFGLAK-----------SF-----GSPNRAYTHQVVTRWYRAPELL 184
Query: 607 QGWPKIDEKADMYSLGIVFFELW--HPF---STAMERQIVL----------------SDL 645
G DM+++G + EL PF + ++ Q+ L
Sbjct: 185 FGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTRIFETLGTPTEEQWPDMCSL 243
Query: 646 KQKGELPP----SWVAKFSEQES----LLRRLMSPSPSDRPSATELLQ 685
FS L++ L +P R +AT+ L+
Sbjct: 244 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 6e-30
Identities = 73/352 (20%), Positives = 129/352 (36%), Gaps = 97/352 (27%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQ 438
+ + +L LG G + V K+KL A+K+IRL+ + P +REV+ L L+
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCT--AIREVSLLKDLK 58
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
H ++V + D+ E L +
Sbjct: 59 HANIVTLH-----------------------------------DIIHTEKSL-----TLV 78
Query: 499 MEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
EY + L+Q + + Q++ GLA+ H Q ++HRDL P N+ + R +
Sbjct: 79 FEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGE 138
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPEIEQGWPKIDEKA 616
+K+ DFGLA+ A + +V T +Y P+I G +
Sbjct: 139 LKLADFGLAR-----------AK-----SIPTKTYDNEVVTLWYRPPDILLGSTDYSTQI 182
Query: 617 DMYSLGIVFFELWH-----PFSTAMERQIVL----------------SDLKQ-KGELPPS 654
DM+ +G +F+E+ P ST E Q+ ++ K P
Sbjct: 183 DMWGVGCIFYEMATGRPLFPGSTVEE-QLHFIFRILGTPTEETWPGILSNEEFKTYNYPK 241
Query: 655 W--------VAKFSEQ-ESLLRRLMSPSPSDRPSATELLQ----DALPPQME 693
+ + LL +L+ +R SA + ++ +L ++
Sbjct: 242 YRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIH 293
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 119 bits (302), Expect = 1e-29
Identities = 60/261 (22%), Positives = 95/261 (36%), Gaps = 60/261 (22%)
Query: 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL---KDKSLPVNDRILREVAT 433
S + +E + +G G +G V ++ G A+K +R+ + +REVA
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 434 LSRLQ---HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKL 490
L RL+ H +VVR DV
Sbjct: 65 LRRLEAFEHPNVVRLM-----------------------------------DVCATSRTD 89
Query: 491 ESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 548
+ + E+ + LR + E L RQ + GL +H I+HRDL P
Sbjct: 90 REIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPE 149
Query: 549 NIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608
NI + +K+ DFGLA+ + + T V T +Y APE+
Sbjct: 150 NILVTSGGTVKLADFGLAR-----------IY-----SYQMALTPVVVTLWYRAPEVLLQ 193
Query: 609 WPKIDEKADMYSLGIVFFELW 629
DM+S+G +F E++
Sbjct: 194 -STYATPVDMWSVGCIFAEMF 213
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 1e-29
Identities = 68/344 (19%), Positives = 117/344 (34%), Gaps = 108/344 (31%)
Query: 363 PSVDSGSPNMSLPSSRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL 421
P V SG + + + ++D++ Q LG G G V+ NK +A+K +
Sbjct: 2 PHVKSG---LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML---QDC- 54
Query: 422 PVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASS 480
+ REV R Q H+VR +E A
Sbjct: 55 ---PKARREVELHWRASQCPHIVRIVDV-YENLYA------------------------- 85
Query: 481 ADVTGQENKLESTYLYIQMEYCP------RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534
L I ME R + +++ + A + + I E + +
Sbjct: 86 ----------GRKCLLIVMECLDGGELFSRIQDRGDQAFTERE---ASEIMKSIGEAIQY 132
Query: 535 IHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG 591
+H I HRD+ P N+ + ++ +K+ DFG
Sbjct: 133 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-------------------------- 166
Query: 592 TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL-------WHPFSTAMERQIVLSD 644
A E K D+ DM+SLG++ + L + A+ +
Sbjct: 167 ----------AKETTGE--KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 214
Query: 645 LKQKGELP-PSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQD 686
+ E P P W ++ SE+ + L+R L+ P+ R + TE +
Sbjct: 215 RMGQYEFPNPEW-SEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 3e-29
Identities = 67/318 (21%), Positives = 124/318 (38%), Gaps = 85/318 (26%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
F+ L+ LG G +G V +K G+ A+K++ ++ I++E++ + + HV
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL----QEIIKEISIMQQCDSPHV 86
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
V+YY ++F+ +W I MEYC
Sbjct: 87 VKYYGSYFK-------NTDLW---------------------------------IVMEYC 106
Query: 503 PR-TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 560
++ + + ++ + + ++GL ++H IHRD+ NI + K+
Sbjct: 107 GAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKL 166
Query: 561 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620
DFG+A L + + + +GT F+ APE+ Q + AD++S
Sbjct: 167 ADFGVAGQLT-DTMAKRNTV--------------IGTPFWMAPEVIQEIG-YNCVADIWS 210
Query: 621 LGIVFFEL---------WHPFSTAMERQIVLSDLKQKG----ELPPSWVAKFSEQESLLR 667
LGI E+ HP + + P W F++ ++
Sbjct: 211 LGITAIEMAEGKPPYADIHPMR-------AIFMIPTNPPPTFRKPELWSDNFTD---FVK 260
Query: 668 RLMSPSPSDRPSATELLQ 685
+ + SP R +AT+LLQ
Sbjct: 261 QCLVKSPEQRATATQLLQ 278
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 3e-29
Identities = 67/281 (23%), Positives = 113/281 (40%), Gaps = 49/281 (17%)
Query: 362 KPSVDSGSPNMSLPSSRY--LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK 419
+ + +M P S + + +E +G G +GHV +KL+ R A+KKI +
Sbjct: 32 QHHSSKPTASMPRPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFE 91
Query: 420 SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAAS 479
L RILRE+A L+RL H HVV+
Sbjct: 92 DLIDCKRILREIAILNRLNHDHVVKVL--------------------------------- 118
Query: 480 SADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539
D+ ++ + LY+ +E +++F + + + L ++ G+ ++H G
Sbjct: 119 --DIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAG 176
Query: 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-------- 591
I+HRDL P N + +K+ DFGLA+ + + +
Sbjct: 177 ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNL 236
Query: 592 ----TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 628
TG V T +Y APE+ E D++S+G +F EL
Sbjct: 237 KRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL 277
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 4e-29
Identities = 59/251 (23%), Positives = 99/251 (39%), Gaps = 50/251 (19%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+ +L+PLG GG G V + + A+KKI L D LRE+ + RL H ++
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVK--HALREIKIIRRLDHDNI 70
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
V+ + + + + S + E +YI EY
Sbjct: 71 VKVF-------------EIL-------------GPSGSQLTDDVGSLTELNSVYIVQEYM 104
Query: 503 PRTLRQVFES----YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-D 557
L V E +H Q++ GL +IH ++HRDL P N+F + +
Sbjct: 105 ETDLANVLEQGPLLEEHAR-----LFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLV 159
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617
+KIGDFGLA+ + + + + T +Y +P + + D
Sbjct: 160 LKIGDFGLARIMDPHYSHKGHL------------SEGLVTKWYRSPRLLLSPNNYTKAID 207
Query: 618 MYSLGIVFFEL 628
M++ G +F E+
Sbjct: 208 MWAAGCIFAEM 218
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 120 bits (301), Expect = 4e-29
Identities = 62/433 (14%), Positives = 122/433 (28%), Gaps = 116/433 (26%)
Query: 353 VSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHG--GFGHVVLCKNKLDGRHYA 410
++ + G + Y E L +G G V L + K G +
Sbjct: 1 MAHHHHHHMENLYFQGMSSFLPEGGCY----ELLTVIGKGFEDLMTVNLARYKPTGEYVT 56
Query: 411 VKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLAS 470
V++I L+ S + + E+ H ++V Y +
Sbjct: 57 VRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATF--------------------- 95
Query: 471 STFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--DHFDKELAWHLFRQ 527
+ L++ + + + + ++ D ++ ++ +
Sbjct: 96 -------------------IADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQG 136
Query: 528 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG- 586
+++ L +IH G +HR + ++I + + G
Sbjct: 137 VLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRS------------NLSMISHGQR 184
Query: 587 ---VSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELWH---PFS------ 633
V V + +PE ++Q D K+D+YS+GI EL + PF
Sbjct: 185 QRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ 244
Query: 634 -------------------------TAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRR 668
+ R + S L + R
Sbjct: 245 MLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHR 304
Query: 669 LMSPS------------PSDRPSATELLQDA----LPPQMEYELLDNILRMMHSSEDTSI 712
SP P RPSA+ LL + + + L + + + +
Sbjct: 305 TFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFEGS 364
Query: 713 YDKVVSSIFDEET 725
+ S IF T
Sbjct: 365 QSQDHSGIFGLVT 377
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 4e-29
Identities = 59/251 (23%), Positives = 111/251 (44%), Gaps = 59/251 (23%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 439
+ + L+ +G G +G V +N G +A+KKIRL+ + + +RE++ L L+H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
++V+ Y DV + +L +
Sbjct: 60 SNIVKLY-----------------------------------DVIHTKKRL-----VLVF 79
Query: 500 EYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
E+ + L+++ + + + A Q++ G+A+ H + ++HRDL P N+ + ++
Sbjct: 80 EHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGEL 139
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPEIEQGWPKIDEKAD 617
KI DFGLA+ AF G+ V T ++ T +Y AP++ G K D
Sbjct: 140 KIADFGLAR-----------AF-----GIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTID 183
Query: 618 MYSLGIVFFEL 628
++S+G +F E+
Sbjct: 184 IWSVGCIFAEM 194
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 5e-29
Identities = 54/263 (20%), Positives = 99/263 (37%), Gaps = 48/263 (18%)
Query: 370 PNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK--DKSLPVNDRI 427
++ P ++ +E+L +G G FG V +++ G+ A+KK+ ++ + P+
Sbjct: 6 DSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT--A 63
Query: 428 LREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQE 487
LRE+ L L+H++VV E
Sbjct: 64 LREIKILQLLKHENVVN----LIEICRTK----------------------------ASP 91
Query: 488 NKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 546
+Y+ ++C L + + F + + ++ GL +IH I+HRD+
Sbjct: 92 YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMK 151
Query: 547 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 606
N+ +K+ DFGLA+ AF T +V T +Y PE+
Sbjct: 152 AANVLITRDGVLKLADFGLAR-----------AFSLAKNSQPNRYTNRVVTLWYRPPELL 200
Query: 607 QGWPKIDEKADMYSLGIVFFELW 629
G D++ G + E+W
Sbjct: 201 LGERDYGPPIDLWGAGCIMAEMW 223
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 1e-28
Identities = 64/257 (24%), Positives = 112/257 (43%), Gaps = 66/257 (25%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL-KDKSLPVNDRILREVATLSRLQH 439
+ F++L+ LG+G + V NK G + A+K+++L ++ P +RE++ + L+H
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPST--AIREISLMKELKH 62
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
+++VR Y DV ENKL +
Sbjct: 63 ENIVRLY-----------------------------------DVIHTENKL-----TLVF 82
Query: 500 EYCPRTLRQVFESY------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 553
E+ L++ +S + L + Q+++GLA H I+HRDL P N+ +
Sbjct: 83 EFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLIN 142
Query: 554 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPEIEQGWPKI 612
R +K+GDFGLA+ AF G+ V+ + +V T +Y AP++ G
Sbjct: 143 KRGQLKLGDFGLAR-----------AF-----GIPVNTFSSEVVTLWYRAPDVLMGSRTY 186
Query: 613 DEKADMYSLGIVFFELW 629
D++S G + E+
Sbjct: 187 STSIDIWSCGCILAEMI 203
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 1e-28
Identities = 63/316 (19%), Positives = 117/316 (37%), Gaps = 81/316 (25%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+ + +G G G V + G+ A++++ L+ + P + I+ E+ + ++ ++
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNI 79
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
V Y ++ GD +W + MEY
Sbjct: 80 VNYLDSYLV-------GDELW---------------------------------VVMEYL 99
Query: 503 PR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 561
+L V + ++A + R+ ++ L +H +IHRD+ +NI +K+
Sbjct: 100 AGGSLTDVVTETCMDEGQIA-AVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLT 158
Query: 562 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621
DFG + + + + VGT ++ APE+ K D++SL
Sbjct: 159 DFGFCAQIT-PEQSKRSTM--------------VGTPYWMAPEVVTRKA-YGPKVDIWSL 202
Query: 622 GIVFFEL---------WHPFSTAMERQIVLSD---LKQKGELPPSWVAKFSEQESLLRRL 669
GI+ E+ +P A+ I + L+ P A F + L R
Sbjct: 203 GIMAIEMIEGEPPYLNENPLR-AL-YLIATNGTPELQN----PEKLSAIFRD---FLNRC 253
Query: 670 MSPSPSDRPSATELLQ 685
+ R SA ELLQ
Sbjct: 254 LEMDVEKRGSAKELLQ 269
|
| >3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A Length = 456 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 1e-28
Identities = 69/447 (15%), Positives = 138/447 (30%), Gaps = 66/447 (14%)
Query: 751 DTELRDYVVQVTKEMFRQHCAKHLE---IEPMYLL----GDCPQFKRNTVKLLTHGGDLL 803
R ++ V + + + +E L G+ +T GG +
Sbjct: 42 AMRCRRHLFDVFHATAKTFGFEEYDAPVLESEELYIRKAGEEIT--EQMFNFITKGGHRV 99
Query: 804 ELSHELRLPFIRWAISNQKSS---FKRYEISSVYRRAIGHSP-PNRY---LQGDFDIIGG 856
L E+ R + +S K Y I +R + R Q + DI+G
Sbjct: 100 ALRPEMTPSLARLLLGKGRSLLLPAKWYSIPQCWRY---EAITRGRRREHYQWNMDIVGV 156
Query: 857 ASALTEAEVLKVTMDIVTRF-FHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAM 915
S E E++ + ++ I +N +L+ + AG+ ++ V ++
Sbjct: 157 KSVSAEVELVCAACWAMRSLGLSSKDVGIKVNSRKVLQTVVEQAGVTSDKFAPVCVIVDK 216
Query: 916 MGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPA 975
M K + L L L VV+ + T + +++ + +
Sbjct: 217 ME---------KIPREEV-EAQLAVLGLEPTVVDAITTT------LSLKSIDEIAQRVGE 260
Query: 976 DKPTRKALDEL--YLRIWRIEKNIYIDA-----LMPPIESYHRNLFFQVFSVKEKYPATL 1028
+ K L + + + + DA L +Y+ + F+ F + K+
Sbjct: 261 EHEAVKELRQFFEQVEAYGYGDWVLFDASVVRGL-----AYYTGIVFEGFDREGKF---- 311
Query: 1029 VEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNE 1088
L GGRYD L + P G I++
Sbjct: 312 --RALCG-GGRYDNL---------LTTYGSPTPIPCAGFGFGDCVIVELLQEKRLLPDIP 359
Query: 1089 AGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVI 1148
+V + + ++ L + A + + + + YA V+
Sbjct: 360 HVVDDVVIPF-DESMRPHALAVLRRLRDAGRSADIILD-KKKVVQAFNYADRVGAVRAVL 417
Query: 1149 LTDTGAQKGLVKVRHLDVKKEKEVQRE 1175
+ ++G V+V+ L KE
Sbjct: 418 VAPEEWERGEVQVKMLREGTGKEEGGA 444
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 2e-28
Identities = 67/334 (20%), Positives = 124/334 (37%), Gaps = 86/334 (25%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+ +G G G V L + K GR AVK + L+ + + + EV + QH +V
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHFNV 104
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
V Y+++ G+ +W + ME+
Sbjct: 105 VEMYKSYLV-------GEELW---------------------------------VLMEFL 124
Query: 503 PR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 561
L + ++++A + +++ LA++H QG+IHRD+ ++I +K+
Sbjct: 125 QGGALTDIVSQVRLNEEQIA-TVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLS 183
Query: 562 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621
DFG + + + + + VGT ++ APE+ + D++SL
Sbjct: 184 DFGFCAQIS-KDVPKRKSL--------------VGTPYWMAPEVISRSL-YATEVDIWSL 227
Query: 622 GIVFFEL---------WHPFSTAMERQIVLSD---LKQKGELPPSWVAKFSEQESLLRRL 669
GI+ E+ P AM +++ S LK + L R+
Sbjct: 228 GIMVIEMVDGEPPYFSDSPVQ-AM-KRLRDSPPPKLKN----SHKVSPVLRD---FLERM 278
Query: 670 MSPSPSDRPSATELLQ-----DALPPQMEYELLD 698
+ P +R +A ELL P+ L+
Sbjct: 279 LVRDPQERATAQELLDHPFLLQTGLPECLVPLIQ 312
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 2e-28
Identities = 69/310 (22%), Positives = 110/310 (35%), Gaps = 72/310 (23%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--RILREVATLSRL 437
DFE L+ +G G FG V + K K + +A+K + K + L + E L
Sbjct: 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILN-KWEMLKRAETACFREERDVLVNG 131
Query: 438 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
+ + + A F+ LY+
Sbjct: 132 DSKWITTLHYA-FQD---------------------------------------DNNLYL 151
Query: 498 QMEYCP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 553
M+Y TL FE D +E+A ++V + +H +HRD+ P+NI D
Sbjct: 152 VMDYYVGGDLLTLLSKFE--DRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD 209
Query: 554 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613
I++ DFG +L +D + VGT Y +PEI Q
Sbjct: 210 MNGHIRLADFGSCL-----KLMEDGTVQSSV---------AVGTPDYISPEILQAMEGGK 255
Query: 614 EK----ADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQ-ES 664
+ D +SLG+ +E+ PF + + K P+ V SE +
Sbjct: 256 GRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKD 315
Query: 665 LLRRLMSPSP 674
L+RRL+
Sbjct: 316 LIRRLICSRE 325
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 2e-28
Identities = 85/392 (21%), Positives = 135/392 (34%), Gaps = 98/392 (25%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--RILREVATLSRLQHQ 440
F+ LG G +G V +K G A+KKI DK L R LRE+ L +H+
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL---FALRTLREIKILKHFKHE 69
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
+++ + +F+ +YI E
Sbjct: 70 NIITIFNIQRPDSFENFNE-----------------------------------VYIIQE 94
Query: 501 YCPRTLRQVFE----SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 556
L +V S DH + Q + + +HG +IHRDL P+N+ ++
Sbjct: 95 LMQTDLHRVISTQMLSDDHIQ-----YFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNC 149
Query: 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616
D+K+ DFGLA+ +D+ AA ++ G V T +Y APE+ K
Sbjct: 150 DLKVCDFGLAR-----IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAM 204
Query: 617 DMYSLGIVFFELWH-----------------------PFSTAMERQI----VLSDLKQKG 649
D++S G + EL+ P S R I +K
Sbjct: 205 DVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLP 264
Query: 650 ELPP-SWVAKFSEQES----LLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRMM 704
P F LL+R++ P+ R +A E L+ Y L+
Sbjct: 265 MYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH------PY------LQTY 312
Query: 705 HSSEDTSIYDKVVSSIFDEETLDMKHHAGTLR 736
H D + + S F+ + L+
Sbjct: 313 HDPNDEPEGEPIPPSFFEFDHYKEALTTKDLK 344
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 3e-28
Identities = 76/339 (22%), Positives = 127/339 (37%), Gaps = 89/339 (26%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+E + LG G FG V KNK G A K I K + + + E+ L+ H ++
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE--EELEDYIVEIEILATCDHPYI 78
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
V+ A++ +W I +E+C
Sbjct: 79 VKLLGAYYH-------DGKLW---------------------------------IMIEFC 98
Query: 503 PR-TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 560
P + + D + + RQ++E L +H + IIHRDL N+ DI++
Sbjct: 99 PGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRL 158
Query: 561 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----EQGWPKIDEKA 616
DFG++ + L + +F +GT ++ APE+ D KA
Sbjct: 159 ADFGVSAKNL-KTLQKRDSF--------------IGTPYWMAPEVVMCETMKDTPYDYKA 203
Query: 617 DMYSLGIVFFEL---------WHPFSTAMERQIVLSD---LKQKGELPPSWVAKFSEQES 664
D++SLGI E+ +P + +I SD L + W +F +
Sbjct: 204 DIWSLGITLIEMAQIEPPHHELNPMR-VL-LKIAKSDPPTLLTPSK----WSVEFRD--- 254
Query: 665 LLRRLMSPSPSDRPSATELLQ-----DALPPQMEYELLD 698
L+ + +P RPSA +LL+ + EL+
Sbjct: 255 FLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRELVA 293
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 4e-28
Identities = 72/347 (20%), Positives = 137/347 (39%), Gaps = 88/347 (25%)
Query: 364 SVDSGSPNMSLPSSRYLND----FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK 419
+ DS + ++ L D FE ++ +G+G +G V ++ G+ A+K + +
Sbjct: 3 ASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD 62
Query: 420 SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAA 478
+ I +E+ L + H+++ YY A+ + D D +W
Sbjct: 63 --EEEE-IKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD-DQLW--------------- 103
Query: 479 SSADVTGQENKLESTYLYIQMEYCP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534
+ ME+C L + + ++ +A ++ R+I+ GL+H
Sbjct: 104 ------------------LVMEFCGAGSVTDLIKNTKGNTLKEEWIA-YICREILRGLSH 144
Query: 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 594
+H +IHRD+ N+ ++K+ DFG++ L + + F
Sbjct: 145 LHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD-RTVGRRNTF-------------- 189
Query: 595 VGTYFYTAPEI----EQGWPKIDEKADMYSLGIVFFEL---------WHPFSTAMERQIV 641
+GT ++ APE+ E D K+D++SLGI E+ HP A+ I
Sbjct: 190 IGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-AL-FLIP 247
Query: 642 LSD---LKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685
+ LK W KF + + + S RP+ +L++
Sbjct: 248 RNPAPRLK-----SKKWSKKFQS---FIESCLVKNHSQRPATEQLMK 286
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 5e-28
Identities = 61/253 (24%), Positives = 104/253 (41%), Gaps = 42/253 (16%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+ +G G +G+V L +K ++ A+KK+ + L RILRE+ L+RL+ ++
Sbjct: 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYI 87
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
+R Y D+ ++ L+ LYI +E
Sbjct: 88 IRLY-----------------------------------DLIIPDDLLKFDELYIVLEIA 112
Query: 503 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 562
L+++F++ +E + ++ G IH GIIHRDL P N + +K+ D
Sbjct: 113 DSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCD 172
Query: 563 FGLAKFLKLEQLDQDAAFPTDTGGVSVDG-------TGQVGTYFYTAPEIEQGWPKIDEK 615
FGLA+ + E+ + T V T +Y APE+ +
Sbjct: 173 FGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKS 232
Query: 616 ADMYSLGIVFFEL 628
D++S G +F EL
Sbjct: 233 IDIWSTGCIFAEL 245
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 5e-28
Identities = 69/315 (21%), Positives = 108/315 (34%), Gaps = 75/315 (23%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--RILREVATLSRL 437
+DFE L+ +G G F V + K K G+ YA+K + K L + E L
Sbjct: 60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMN-KWDMLKRGEVSCFREERDVLVNG 118
Query: 438 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
+ + + + A F+ YLY+
Sbjct: 119 DRRWITQLHFA-FQD---------------------------------------ENYLYL 138
Query: 498 QMEYCP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 553
MEY TL F + E+A +IV + +H G +HRD+ P+NI D
Sbjct: 139 VMEYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLD 196
Query: 554 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPK 611
I++ DFG L+ + + VGT Y +PEI G
Sbjct: 197 RCGHIRLADFGSCLKLRADGTVRSLVA--------------VGTPDYLSPEILQAVGGGP 242
Query: 612 IDEK----ADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQ- 662
D ++LG+ +E+ PF + + K L P E+
Sbjct: 243 GTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEA 302
Query: 663 ESLLRRLMSPSPSDR 677
++RL+ P R
Sbjct: 303 RDFIQRLLC-PPETR 316
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 8e-28
Identities = 70/340 (20%), Positives = 126/340 (37%), Gaps = 103/340 (30%)
Query: 362 KPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL 421
P V + +++ + FE L+ +G G FG V + + + YA+K + K K +
Sbjct: 2 MPPVFDENEDVNF------DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMN-KQKCV 54
Query: 422 PVND--RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAAS 479
N+ + +E+ + L+H +V +W S F +
Sbjct: 55 ERNEVRNVFKELQIMQGLEHPFLVN-----------------LWYS-------FQDE--- 87
Query: 480 SADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFR------------- 526
+++ ++ +L +HL +
Sbjct: 88 -------------EDMFMVVDLLL-------------GGDLRYHLQQNVHFKEETVKLFI 121
Query: 527 -QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTG 585
++V L ++ Q IIHRD+ P+NI D + I DF +A P +T
Sbjct: 122 CELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAM-----------LPRETQ 170
Query: 586 GVSVDGTGQVGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPF---STAME 637
++ GT Y APE+ + D +SLG+ +EL P+ S+
Sbjct: 171 ITTM-----AGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS 225
Query: 638 RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677
++IV + P +W E SLL++L+ P+P R
Sbjct: 226 KEIVHTFETTVVTYPSAWS---QEMVSLLKKLLEPNPDQR 262
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 3e-26
Identities = 64/312 (20%), Positives = 112/312 (35%), Gaps = 75/312 (24%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--RILREVATLSRL 437
D+E ++ +G G FG V L ++K + YA+K + K + + +D E ++
Sbjct: 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLS-KFEMIKRSDSAFFWEERDIMAFA 126
Query: 438 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
VV+ + A F+ YLY+
Sbjct: 127 NSPWVVQLFYA-FQD---------------------------------------DRYLYM 146
Query: 498 QMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
MEY P + ++ A ++V L IH G IHRD+ P+N+
Sbjct: 147 VMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL 201
Query: 553 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI---EQGW 609
D +K+ DFG +++++ DT VGT Y +PE+ + G
Sbjct: 202 DKSGHLKLADFGTCM-----KMNKEGMVRCDTA---------VGTPDYISPEVLKSQGGD 247
Query: 610 PKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESL 665
+ D +S+G+ +E+ PF + K L P E ++L
Sbjct: 248 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNL 307
Query: 666 LRRLMSPSPSDR 677
+ ++ R
Sbjct: 308 ICAFLT-DREVR 318
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 4e-26
Identities = 67/381 (17%), Positives = 128/381 (33%), Gaps = 103/381 (27%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+ +G G +G V +K G A+KK+ +S R RE+ L +QH++V
Sbjct: 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV 85
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
+ + D Y+ M +
Sbjct: 86 IGLLDVFTPASSLRNFYD----------------------------------FYLVMPFM 111
Query: 503 PRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
L+++ S + +L Q+++GL +IH G++HRDL P N+ + ++K
Sbjct: 112 QTDLQKIMGLKFSEEKIQ-----YLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELK 166
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619
I DFGLA+ + TG V T +Y APE+ W ++ D++
Sbjct: 167 ILDFGLAR------------------HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIW 208
Query: 620 SLGIVFFELW-----------------------HPFSTAMER---QIVLSDLKQKGELPP 653
S+G + E+ P + +++ + S ++ + P
Sbjct: 209 SVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPR 268
Query: 654 -SWVAKFSEQES----LLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSE 708
+ F LL +++ R +A + L + E
Sbjct: 269 KDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH------PF------FEPFRDPE 316
Query: 709 DTSIYDKVVSSIFDEETLDMK 729
+ + + + E L +
Sbjct: 317 EETEAQQPFDDSLEHEKLTVD 337
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 5e-26
Identities = 59/260 (22%), Positives = 98/260 (37%), Gaps = 58/260 (22%)
Query: 376 SSRYLNDFEELQPLGHGGFGHVVLCKN-KLDGRHYAVKKIRLKDKSLPVNDRILREVATL 434
R +E + +G G +G V ++ K GR A+K++R++ + +REVA L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 435 SRLQ---HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 491
L+ H +VVR + DV
Sbjct: 66 RHLETFEHPNVVRLF-----------------------------------DVCTVSRTDR 90
Query: 492 STYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 549
T L + E+ + L + E + Q++ GL +H ++HRDL P N
Sbjct: 91 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQN 150
Query: 550 IFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609
I + IK+ DFGLA+ + + T V T +Y APE+
Sbjct: 151 ILVTSSGQIKLADFGLAR-----------IY-----SFQMALTSVVVTLWYRAPEVLLQ- 193
Query: 610 PKIDEKADMYSLGIVFFELW 629
D++S+G +F E++
Sbjct: 194 SSYATPVDLWSVGCIFAEMF 213
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 6e-26
Identities = 77/321 (23%), Positives = 120/321 (37%), Gaps = 103/321 (32%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN--DRILREVATLSRL 437
L+ F+ ++ LG G FG V+L K+K G HYA+K + K K + + + L E L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAV 98
Query: 438 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
+V+ + S F + ++ LY+
Sbjct: 99 NFPFLVK-----------------LEFS-------FKD----------------NSNLYM 118
Query: 498 QMEYCPRTLRQVFESYDHFDKELAWHLFR--------------QIVEGLAHIHGQGIIHR 543
MEY E+ HL R QIV ++H +I+R
Sbjct: 119 VMEYVA-------------GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV-GTYFYTA 602
DL P N+ D + I++ DFG AK +K T + GT A
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVK-------------------GRTWTLCGTPEALA 206
Query: 603 PEI--EQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVA 657
PEI +G+ K D ++LG++ +E+ + PF QI + K P
Sbjct: 207 PEIILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 658 KFSEQ-ESLLRRLMSPSPSDR 677
FS + LLR L+ + R
Sbjct: 261 -FSSDLKDLLRNLLQVDLTKR 280
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 1e-25
Identities = 44/251 (17%), Positives = 89/251 (35%), Gaps = 65/251 (25%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-H 439
+D++ ++ LG G + V N + VK ++ K +I RE+ L L+
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK-----KKIKREIKILENLRGG 90
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
+++ D+ ++
Sbjct: 91 PNIITLA-----------------------------------DIVKDPVSRTPALVF--- 112
Query: 500 EYCPRT-LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-D 557
E+ T +Q+ Y +I++ L + H GI+HRD+ P+N+ D +
Sbjct: 113 EHVNNTDFKQL---YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK 169
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617
+++ D+GLA+F + +V + ++ PE+ + D D
Sbjct: 170 LRLIDWGLAEF----------------YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 213
Query: 618 MYSLGIVFFEL 628
M+SLG + +
Sbjct: 214 MWSLGCMLASM 224
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 2e-25
Identities = 60/249 (24%), Positives = 103/249 (41%), Gaps = 55/249 (22%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
+ +LQP+G G +G V + G A+KK+ +S R RE+ L ++H+
Sbjct: 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE 84
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLES-TYLYIQM 499
+V+ DV + L+ T Y+ M
Sbjct: 85 NVIGLL-----------------------------------DVFTPDETLDDFTDFYLVM 109
Query: 500 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
+ L ++ + + ++ L Q+++GL +IH GIIHRDL P N+ + ++K
Sbjct: 110 PFMGTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELK 168
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619
I DFGLA+ + TG V T +Y APE+ W + + D++
Sbjct: 169 ILDFGLAR------------------QADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIW 210
Query: 620 SLGIVFFEL 628
S+G + E+
Sbjct: 211 SVGCIMAEM 219
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 2e-25
Identities = 58/246 (23%), Positives = 99/246 (40%), Gaps = 53/246 (21%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
+ + + D +Y+
Sbjct: 91 IGLLDVFTPARSLEEFND----------------------------------VYLVTHLM 116
Query: 503 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 562
L + + D + + ++ QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 117 GADLNNIVKCQKLTDDHVQFLIY-QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 175
Query: 563 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622
FGLA+ + + TG V T +Y APEI W ++ D++S+G
Sbjct: 176 FGLAR------------------HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 217
Query: 623 IVFFEL 628
+ EL
Sbjct: 218 CIMAEL 223
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 4e-25
Identities = 53/246 (21%), Positives = 92/246 (37%), Gaps = 49/246 (19%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+ L +G G +G V + L+ A+KKI + R LRE+ L R +H+++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENI 87
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
+ + +YI +
Sbjct: 88 IGINDIIRAPTIEQMKD-----------------------------------VYIVQDLM 112
Query: 503 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 562
L ++ ++ H + + QI+ GL +IH ++HRDL P+N+ + D+KI D
Sbjct: 113 ETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 563 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622
FGLA+ + T V T +Y APEI + D++S+G
Sbjct: 172 FGLARVADPDHDHTGFL------------TEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 623 IVFFEL 628
+ E+
Sbjct: 220 CILAEM 225
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 4e-25
Identities = 77/321 (23%), Positives = 125/321 (38%), Gaps = 103/321 (32%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--RILREVATLSRL 437
L DF+ L+ LG G FG V L +++ +GR+YA+K ++ K+ + + E LS +
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLK-KEIVVRLKQVEHTNDERLMLSIV 63
Query: 438 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
H ++R MWG+ F + + +++
Sbjct: 64 THPFIIR-----------------MWGT-------FQD----------------AQQIFM 83
Query: 498 QMEYCPRTLRQVFESYDHFDKELAWHLFR--------------QIVEGLAHIHGQGIIHR 543
M+Y EL L + ++ L ++H + II+R
Sbjct: 84 IMDYIE-------------GGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYR 130
Query: 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV-GTYFYTA 602
DL P NI D IKI DFG AK++ D T + GT Y A
Sbjct: 131 DLKPENILLDKNGHIKITDFGFAKYVP-------------------DVTYTLCGTPDYIA 171
Query: 603 PEI--EQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVA 657
PE+ + + K D +S GI+ +E+ + PF + + L + PP
Sbjct: 172 PEVVSTKPYNK---SIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPF--- 225
Query: 658 KFSEQ-ESLLRRLMSPSPSDR 677
F+E + LL RL++ S R
Sbjct: 226 -FNEDVKDLLSRLITRDLSQR 245
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 8e-25
Identities = 78/367 (21%), Positives = 124/367 (33%), Gaps = 123/367 (33%)
Query: 345 NQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKL 404
VF + + S + ++F + + ++++ NDF + +G GGFG V C+
Sbjct: 159 GDVFQKFIESDKFTRFCQWKNVELNIHLTM------NDFSVHRIIGRGGFGEVYGCRKAD 212
Query: 405 DGRHYAVKKIRLKDKSLPVND---------RILREVATLSRLQHQHVVRYYQAWFETGVA 455
G+ YA+K L K + + +L V S +V A F T
Sbjct: 213 TGKMYAMKC--LDKKRIKMKQGETLALNERIMLSLV---STGDCPFIVCMSYA-FHT--- 263
Query: 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH 515
L ++
Sbjct: 264 ------------------------------------PDKLSFILDLMN------------ 275
Query: 516 FDKELAWHLFR--------------QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 561
+L +HL + +I+ GL H+H + +++RDL P NI D ++I
Sbjct: 276 -GGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRIS 334
Query: 562 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 621
D GLA ++ VGT+ Y APE+ Q D AD +SL
Sbjct: 335 DLGLACDFSKKK--------PHA---------SVGTHGYMAPEVLQKGVAYDSSADWFSL 377
Query: 622 GIVFFEL---WHPFSTA-------MERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLM 670
G + F+L PF ++R L ELP FS + SLL L+
Sbjct: 378 GCMLFKLLRGHSPFRQHKTKDKHEIDRMT----LTMAVELPD----SFSPELRSLLEGLL 429
Query: 671 SPSPSDR 677
+ R
Sbjct: 430 QRDVNRR 436
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 1e-24
Identities = 65/250 (26%), Positives = 103/250 (41%), Gaps = 55/250 (22%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 439
L ++ L+P+G G G V + + R+ A+KK+ ++ R RE+ + + H
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLES-TYLYIQ 498
++++ +V + LE +YI
Sbjct: 84 KNIIGLL-----------------------------------NVFTPQKSLEEFQDVYIV 108
Query: 499 MEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
ME L QV + D E +L Q++ G+ H+H GIIHRDL P+NI + +
Sbjct: 109 MELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 166
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618
KI DFGLA+ T G S T V T +Y APE+ G E D+
Sbjct: 167 KILDFGLAR----------------TAGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDI 209
Query: 619 YSLGIVFFEL 628
+S+G + E+
Sbjct: 210 WSVGCIMGEM 219
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 2e-24
Identities = 70/301 (23%), Positives = 121/301 (40%), Gaps = 60/301 (19%)
Query: 334 SKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNM---SLPSSRY--LNDFEELQP 388
S+P+ F Q F +++ S +++ + S + S + L ++ L+P
Sbjct: 10 SEPTLDVKIAFCQGFDKQVDVSYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKP 69
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 448
+G G G V + + R+ A+KK+ ++ R RE+ + + H++++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL-- 127
Query: 449 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLES-TYLYIQMEYCPRTLR 507
+V + LE +Y+ ME L
Sbjct: 128 ---------------------------------NVFTPQKTLEEFQDVYLVMELMDANLC 154
Query: 508 QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 567
QV + D E +L Q++ G+ H+H GIIHRDL P+NI + +KI DFGLA+
Sbjct: 155 QVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
Query: 568 FLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFE 627
T + T V T +Y APE+ G E D++S+G + E
Sbjct: 213 -------------TAGTSFMM---TPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGE 255
Query: 628 L 628
+
Sbjct: 256 M 256
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 3e-24
Identities = 53/261 (20%), Positives = 84/261 (32%), Gaps = 72/261 (27%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND---------RILREVAT 433
+ + + G +G V + +G A+K++ + R+LRE+
Sbjct: 24 YTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 434 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLEST 493
L+ H +++ +
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHK---------------------------------- 108
Query: 494 YLYIQMEYCPRTLRQVFESY------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTP 547
LY+ E L QV H + I+ GL +H G++HRDL P
Sbjct: 109 -LYLVTELMRTDLAQVIHDQRIVISPQHIQ-----YFMYHILLGLHVLHEAGVVHRDLHP 162
Query: 548 NNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607
NI NDI I DF LA+ + DA T V +Y APE+
Sbjct: 163 GNILLADNNDITICDFNLAR-----EDTADANK-----------THYVTHRWYRAPELVM 206
Query: 608 GWPKIDEKADMYSLGIVFFEL 628
+ + DM+S G V E+
Sbjct: 207 QFKGFTKLVDMWSAGCVMAEM 227
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 3e-24
Identities = 57/257 (22%), Positives = 102/257 (39%), Gaps = 54/257 (21%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQH 441
+E ++ LG G +G V ++ G AVKKI ++ R RE+ L+ L H++
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
+V +V +N + +Y+ +Y
Sbjct: 71 IVNLL-----------------------------------NVLRADNDRD---VYLVFDY 92
Query: 502 CPRTLRQVFES----YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
L V + H ++ Q+++ + ++H G++HRD+ P+NI +A
Sbjct: 93 METDLHAVIRANILEPVHKQ-----YVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECH 147
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG------TGQVGTYFYTAPEIEQGWPK 611
+K+ DFGL++ + + + T V T +Y APEI G K
Sbjct: 148 VKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTK 207
Query: 612 IDEKADMYSLGIVFFEL 628
+ DM+SLG + E+
Sbjct: 208 YTKGIDMWSLGCILGEI 224
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 7e-24
Identities = 73/317 (23%), Positives = 112/317 (35%), Gaps = 84/317 (26%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--RILREVATLSRL 437
+ F + + LG GGFG V C+ K G+ YA KK+ K + + E L+++
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLN-KKRLKKRKGYQGAMVEKKILAKV 242
Query: 438 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
+ +V A FET T L +
Sbjct: 243 HSRFIVSLAYA-FET---------------------------------------KTDLCL 262
Query: 498 QMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
M + V E F + A QIV GL H+H + II+RDL P N+
Sbjct: 263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL 322
Query: 553 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612
D +++I D GLA G GT + APE+ G
Sbjct: 323 DDDGNVRISDLGLAV-----------ELKAGQTKTK----GYAGTPGFMAPELLLGEE-Y 366
Query: 613 DEKADMYSLGIVFFEL---WHPF--------STAMERQIVLSDLKQKGELPPSWVAKFS- 660
D D ++LG+ +E+ PF + +++++ L+Q P KFS
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV----LEQAVTYPD----KFSP 418
Query: 661 EQESLLRRLMSPSPSDR 677
+ L+ P R
Sbjct: 419 ASKDFCEALLQKDPEKR 435
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 2e-23
Identities = 70/310 (22%), Positives = 116/310 (37%), Gaps = 73/310 (23%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR--ILREVATLSRL 437
N F + + LG GGFG V C+ + G+ YA KK+ K + L E L ++
Sbjct: 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLE-KKRIKKRKGEAMALNEKQILEKV 241
Query: 438 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
+ VV A +ET L +
Sbjct: 242 NSRFVVSLAYA-YET---------------------------------------KDALCL 261
Query: 498 QMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
+ + + + F + A +I GL +H + I++RDL P NI
Sbjct: 262 VLTLMNGGDLKFHIYHMGQ--AGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL 319
Query: 553 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612
D I+I D GLA + Q +VGT Y APE+ +
Sbjct: 320 DDHGHIRISDLGLAVHVPEGQ-------TIKG---------RVGTVGYMAPEVVKNERY- 362
Query: 613 DEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQK-GELPPSWVAKFSEQ-ESLLR 667
D ++LG + +E+ PF +++I ++++ E+P + +FS Q SL
Sbjct: 363 TFSPDWWALGCLLYEMIAGQSPF-QQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCS 421
Query: 668 RLMSPSPSDR 677
+L+ P++R
Sbjct: 422 QLLCKDPAER 431
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 99.2 bits (248), Expect = 2e-22
Identities = 75/319 (23%), Positives = 117/319 (36%), Gaps = 96/319 (30%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--RILREVATLSRL 437
+NDF+ L+ LG G FG V+L + K GR+YA+K +R K+ + ++ + E L
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNT 62
Query: 438 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
+H + A F+T L
Sbjct: 63 RHPFLTALKYA-FQT---------------------------------------HDRLCF 82
Query: 498 QMEYCPRTLRQVFESYDHFDKELAWHLFRQ--------------IVEGLAHIHGQGIIHR 543
MEY EL +HL R+ IV L ++H + +++R
Sbjct: 83 VMEYANG-------------GELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 603
D+ N+ D IKI DFGL K E + A T GT Y AP
Sbjct: 130 DIKLENLMLDKDGHIKITDFGLCK----EGISDGA--TMKT---------FCGTPEYLAP 174
Query: 604 EI--EQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAK 658
E+ + + D + LG+V +E+ PF ++ L ++ P ++
Sbjct: 175 EVLEDNDY---GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR-TLSP 230
Query: 659 FSEQESLLRRLMSPSPSDR 677
E +SLL L+ P R
Sbjct: 231 --EAKSLLAGLLKKDPKQR 247
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 99.2 bits (248), Expect = 2e-22
Identities = 83/323 (25%), Positives = 124/323 (38%), Gaps = 102/323 (31%)
Query: 380 LNDFEELQPLGHGGFGHVVLCK---NKLDGRHYAVKKIRLKDKSLPVNDRI--LREVATL 434
+ FE L+ LG G FG V L K + YA+K LK +L V DR+ E L
Sbjct: 23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKV--LKKATLKVRDRVRTKMERDIL 80
Query: 435 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 494
+ H +V+ + A F+T E KL
Sbjct: 81 VEVNHPFIVKLHYA-FQT----------------------------------EGKL---- 101
Query: 495 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFR--------------QIVEGLAHIHGQGI 540
Y+ +++ +L L + ++ L H+H GI
Sbjct: 102 -YLILDFLR-------------GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGI 147
Query: 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFY 600
I+RDL P NI D IK+ DFGL+K E +D + + GT Y
Sbjct: 148 IYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEK--KAYS---------FCGTVEY 192
Query: 601 TAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSW 655
APE+ +G + AD +S G++ FE+ PF ++ + LK K +P
Sbjct: 193 MAPEVVNRRGH---TQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF- 248
Query: 656 VAKFS-EQESLLRRLMSPSPSDR 677
S E +SLLR L +P++R
Sbjct: 249 ---LSPEAQSLLRMLFKRNPANR 268
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 4e-22
Identities = 76/346 (21%), Positives = 128/346 (36%), Gaps = 111/346 (32%)
Query: 362 KPSVDSGSPNMSLPSSRY--LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK 419
P S N+ S+ + +DF L+ +G G FG V+L ++K + YAVK ++ K
Sbjct: 17 PPPAPSQQINLGPSSNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQ-KKA 75
Query: 420 SLPVND--------RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASS 471
L + +L L ++H +V + + F+T
Sbjct: 76 ILKKKEEKHIMSERNVL-----LKNVKHPFLVGLHFS-FQT------------------- 110
Query: 472 TFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQ---- 527
+ LY ++Y EL +HL R+
Sbjct: 111 --------------------ADKLYFVLDYIN-------------GGELFYHLQRERCFL 137
Query: 528 ----------IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQD 577
I L ++H I++RDL P NI D++ I + DFGL K E ++ +
Sbjct: 138 EPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCK----ENIEHN 193
Query: 578 AAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPF 632
+ T T GT Y APE+ +Q + D D + LG V +E+ PF
Sbjct: 194 S--TTST---------FCGTPEYLAPEVLHKQPY---DRTVDWWCLGAVLYEMLYGLPPF 239
Query: 633 STAMERQIVLSDLKQKGELPPSWVAKFS-EQESLLRRLMSPSPSDR 677
+ ++ + L + +L P+ + LL L+ + R
Sbjct: 240 YSRNTAEMYDNILNKPLQLKPN----ITNSARHLLEGLLQKDRTKR 281
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 99.8 bits (249), Expect = 5e-22
Identities = 81/340 (23%), Positives = 125/340 (36%), Gaps = 98/340 (28%)
Query: 363 PSVDSGSPNMSLPSSRY-----LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK 417
PS +SG+ M + ++ +N+FE L+ LG G FG V+L K K GR+YA+K ++ K
Sbjct: 125 PSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-K 183
Query: 418 DKSLPVND--RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSN 475
+ + ++ L E L +H + + F+T
Sbjct: 184 EVIVAKDEVAHTLTENRVLQNSRHPFLTALKYS-FQT----------------------- 219
Query: 476 RAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQ-------- 527
L MEY EL +HL R+
Sbjct: 220 ----------------HDRLCFVMEYANG-------------GELFFHLSRERVFSEDRA 250
Query: 528 ------IVEGLAHIHGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAF 580
IV L ++H + +++RDL N+ D IKI DFGL K E + A
Sbjct: 251 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK----EGIKDGAT- 305
Query: 581 PTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPFSTAME 637
T GT Y APE+ + D + LG+V +E+ PF
Sbjct: 306 -MKT---------FCGTPEYLAPEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDH 354
Query: 638 RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677
++ L ++ P + E +SLL L+ P R
Sbjct: 355 EKLFELILMEEIRFPR-TLGP--EAKSLLSGLLKKDPKQR 391
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 97.2 bits (243), Expect = 8e-22
Identities = 79/339 (23%), Positives = 120/339 (35%), Gaps = 105/339 (30%)
Query: 368 GSPNMSLPSSRY---LNDFEELQPLGHGGFGHVVLCK---NKLDGRHYAVKKIRLKDKSL 421
GS S+ FE L+ LG GG+G V + G+ +A+K ++ K +
Sbjct: 1 GSSETSVNRGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLK-KAMIV 59
Query: 422 PVND---RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAA 478
E L ++H +V A F+T
Sbjct: 60 RNAKDTAHTKAERNILEEVKHPFIVDLIYA-FQT-------------------------- 92
Query: 479 SSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQ----------- 527
KL Y+ +EY EL L R+
Sbjct: 93 --------GGKL-----YLILEYLS-------------GGELFMQLEREGIFMEDTACFY 126
Query: 528 ---IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDT 584
I L H+H +GII+RDL P NI + + +K+ DFGL K E + T T
Sbjct: 127 LAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK----ESIHDGT--VTHT 180
Query: 585 GGVSVDGTGQVGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQ 639
GT Y APEI G + D +SLG + +++ PF+ ++
Sbjct: 181 ---------FCGTIEYMAPEILMRSGH---NRAVDWWSLGALMYDMLTGAPPFTGENRKK 228
Query: 640 IVLSDLKQKGELPPSWVAKFS-EQESLLRRLMSPSPSDR 677
+ LK K LPP + E LL++L+ + + R
Sbjct: 229 TIDKILKCKLNLPPY----LTQEARDLLKKLLKRNAASR 263
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 96.9 bits (242), Expect = 1e-21
Identities = 75/345 (21%), Positives = 122/345 (35%), Gaps = 110/345 (31%)
Query: 362 KPSVDSGSPNMSLPSSRY-LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS 420
K S G+ S+R +++FE ++ LG G FG V+L + K G YAVK ++ KD
Sbjct: 3 KESSKEGNGIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLK-KDVI 61
Query: 421 LPVND--------RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASST 472
L +D RIL H + + + F+T
Sbjct: 62 LQDDDVECTMTEKRILSLAR-----NHPFLTQLFCC-FQT-------------------- 95
Query: 473 FSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQ----- 527
L+ ME+ +L +H+ +
Sbjct: 96 -------------------PDRLFFVMEFVN-------------GGDLMFHIQKSRRFDE 123
Query: 528 ---------IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 578
I+ L +H +GII+RDL +N+ D K+ DFG+ K E +
Sbjct: 124 ARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCK----EGICNGV 179
Query: 579 AFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPFS 633
T T GT Y APEI E + D +++G++ +E+ PF
Sbjct: 180 --TTAT---------FCGTPDYIAPEILQEMLYGP---AVDWWAMGVLLYEMLCGHAPFE 225
Query: 634 TAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDR 677
E + + L + P E +L+ M+ +P+ R
Sbjct: 226 AENEDDLFEAILNDEVVYPTW----LHEDATGILKSFMTKNPTMR 266
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 2e-21
Identities = 76/328 (23%), Positives = 123/328 (37%), Gaps = 102/328 (31%)
Query: 380 LNDFEELQPLGHGGFGHVVLCK---NKLDGRHYAVK-----KIRLKDKSLPVNDRILREV 431
+ +FE L+ LG G +G V L + G+ YA+K I K K+ + E
Sbjct: 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTT---EHTRTER 109
Query: 432 ATLSRLQHQH-VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKL 490
L ++ +V + A F+T
Sbjct: 110 QVLEHIRQSPFLVTLHYA-FQT-------------------------------------- 130
Query: 491 ESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQ--------------IVEGLAHIH 536
T L++ ++Y EL HL ++ IV L H+H
Sbjct: 131 -ETKLHLILDYIN-------------GGELFTHLSQRERFTEHEVQIYVGEIVLALEHLH 176
Query: 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 596
GII+RD+ NI D+ + + DFGL+K ++ ++ F G
Sbjct: 177 KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDF--------------CG 222
Query: 597 TYFYTAPEIEQGWPKIDEKA-DMYSLGIVFFEL---WHPFSTAMERQIV--LSDLKQKGE 650
T Y AP+I +G +KA D +SLG++ +EL PF+ E+ +S K E
Sbjct: 223 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE 282
Query: 651 LP-PSWVAKFSEQESLLRRLMSPSPSDR 677
P P ++ + L++RL+ P R
Sbjct: 283 PPYPQEMSA--LAKDLIQRLLMKDPKKR 308
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 98.9 bits (246), Expect = 3e-21
Identities = 82/394 (20%), Positives = 132/394 (33%), Gaps = 98/394 (24%)
Query: 303 QSTGSLTDALPQIATELYNLGIFSERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWK 362
L Q E +N+ + G + + +F + + + K
Sbjct: 270 AGVDGWFKLLSQEEGEYFNVPV-PPEGSEGNEELRQKFERAKIGQGTKAPEEKTANTISK 328
Query: 363 PSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP 422
+ M L DF L LG G FG V+L + K YAVK ++ KD +
Sbjct: 329 FDNNGNRDRMKL------TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILK-KDVVIQ 381
Query: 423 VND--------RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFS 474
+D R+L + + + + F+T
Sbjct: 382 DDDVECTMVEKRVLALPG-----KPPFLTQLHSC-FQT---------------------- 413
Query: 475 NRAASSADVTGQENKLESTYLYIQMEYCP------RTLRQVFESYDHFDKELAWHLFRQI 528
LY MEY + F + A +I
Sbjct: 414 -----------------MDRLYFVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEI 451
Query: 529 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVS 588
GL + +GII+RDL +N+ D+ IKI DFG+ K E + T T
Sbjct: 452 AIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK----ENIWDGVT--TKT---- 501
Query: 589 VDGTGQVGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLS 643
GT Y APEI Q + K D ++ G++ +E+ PF E ++ S
Sbjct: 502 -----FCGTPDYIAPEIIAYQPYGK---SVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS 553
Query: 644 DLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677
++ P ++K E ++ + LM+ P R
Sbjct: 554 IMEHNVAYPK-SMSK--EAVAICKGLMTKHPGKR 584
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 95.8 bits (239), Expect = 4e-21
Identities = 73/323 (22%), Positives = 114/323 (35%), Gaps = 103/323 (31%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--------RILREV 431
L DF L LG G FG V+L + K YAVK ++ KD + +D R+L
Sbjct: 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILK-KDVVIQDDDVECTMVEKRVLALP 77
Query: 432 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 491
+ + + + F+T
Sbjct: 78 G-----KPPFLTQLHSC-FQT--------------------------------------- 92
Query: 492 STYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQ--------------IVEGLAHIHG 537
LY MEY +L +H+ + I GL +
Sbjct: 93 MDRLYFVMEYVN-------------GGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQS 139
Query: 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 597
+GII+RDL +N+ D+ IKI DFG+ K E + T T GT
Sbjct: 140 KGIIYRDLKLDNVMLDSEGHIKIADFGMCK----ENIWDGVT--TKT---------FCGT 184
Query: 598 YFYTAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPS 654
Y APEI P + D ++ G++ +E+ PF E ++ S ++ P
Sbjct: 185 PDYIAPEIIAYQPY-GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK- 242
Query: 655 WVAKFSEQESLLRRLMSPSPSDR 677
++K E ++ + LM+ P R
Sbjct: 243 SMSK--EAVAICKGLMTKHPGKR 263
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 92.1 bits (229), Expect = 2e-20
Identities = 39/338 (11%), Positives = 73/338 (21%), Gaps = 100/338 (29%)
Query: 363 PSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP 422
P P + + RY L G + R A+ + +
Sbjct: 17 PDDVQLVPGARIANGRY----RLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPD 72
Query: 423 -VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSA 481
V L LSR+ V R
Sbjct: 73 DVLQETLSRTLRLSRIDKPGVARVL----------------------------------- 97
Query: 482 DVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540
DV + E+ +L++V ++ A + + H G+
Sbjct: 98 DV-VHTR----AGGLVVAEWIRGGSLQEVADT--SPSPVGAIRAMQSLAAAADAAHRAGV 150
Query: 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFY 600
P+ + D+ +
Sbjct: 151 ALSIDHPSRVRVSIDGDVVLAYPA-----------------------------------T 175
Query: 601 TAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPP---S 654
+ + D+ +G + L P A R + + P
Sbjct: 176 MPDA--------NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPAD 227
Query: 655 WVAKFSEQ-ESLLRRLMSPSPSDRPSAT--ELLQDALP 689
Q ++ R + R ++T L+Q A
Sbjct: 228 IDRDIPFQISAVAARSVQGDGGIRSASTLLNLMQQATA 265
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 92.7 bits (231), Expect = 3e-20
Identities = 75/343 (21%), Positives = 119/343 (34%), Gaps = 111/343 (32%)
Query: 363 PSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP 422
P ++ P++ + + DF + LG G FG V L + K + +A+K ++ KD L
Sbjct: 1 PELNKERPSLQIKLK--IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALK-KDVVLM 57
Query: 423 VND--------RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFS 474
+D R+L +H + + F+T
Sbjct: 58 DDDVECTMVEKRVLSLAW-----EHPFLTHMFCT-FQT---------------------- 89
Query: 475 NRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQ------- 527
L+ MEY +L +H+
Sbjct: 90 -----------------KENLFFVMEYLN-------------GGDLMYHIQSCHKFDLSR 119
Query: 528 -------IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAF 580
I+ GL +H +GI++RDL +NI D IKI DFG+ K E + DA
Sbjct: 120 ATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK----ENMLGDAK- 174
Query: 581 PTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPFSTA 635
T+T GT Y APEI Q + D +S G++ +E+ PF
Sbjct: 175 -TNT---------FCGTPDYIAPEILLGQKYNH---SVDWWSFGVLLYEMLIGQSPFHGQ 221
Query: 636 MERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDR 677
E ++ S P ++ + LL +L P R
Sbjct: 222 DEEELFHSIRMDNPFYPRW----LEKEAKDLLVKLFVREPEKR 260
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 1e-19
Identities = 65/333 (19%), Positives = 117/333 (35%), Gaps = 114/333 (34%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--------RILREV 431
L DF+ L+ +G G + V+L + K R YA+K ++ K+ D + +
Sbjct: 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVK-KELVNDDEDIDWVQTEKHVFEQA 66
Query: 432 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 491
+ H +V + F+T
Sbjct: 67 S-----NHPFLVGLHSC-FQT--------------------------------------- 81
Query: 492 STYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQ--------------IVEGLAHIHG 537
+ L+ +EY +L +H+ RQ I L ++H
Sbjct: 82 ESRLFFVIEYVN-------------GGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 128
Query: 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 597
+GII+RDL +N+ D+ IK+ D+G+ K E L T T GT
Sbjct: 129 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK----EGLRPGD--TTST---------FCGT 173
Query: 598 YFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQ----- 647
Y APEI + + D ++LG++ FE+ PF + +
Sbjct: 174 PNYIAPEILRGEDY---GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV 230
Query: 648 --KGELP-PSWVAKFSEQESLLRRLMSPSPSDR 677
+ ++ P ++ + S+L+ ++ P +R
Sbjct: 231 ILEKQIRIPRSLSV--KAASVLKSFLNKDPKER 261
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 1e-19
Identities = 74/359 (20%), Positives = 127/359 (35%), Gaps = 92/359 (25%)
Query: 363 PSVDSGSPNMSLPSSRYLNDFEELQP--------LGHGGFGHVVLCK----NKLDGRHYA 410
P+ ++ ++ S+ D + + LG G FG V +C+ G A
Sbjct: 15 PTTENLYFQGAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVA 74
Query: 411 VKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLAS 470
VKK L+ + RE+ L LQH ++V+Y GV
Sbjct: 75 VKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYK------GV---------------- 110
Query: 471 STFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQ-VFESYDHFDKELAWHLFRQI 528
+ L + MEY P +LR + + + D QI
Sbjct: 111 ------------CYSAGRR----NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 154
Query: 529 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVS 588
+G+ ++ + IHRDL NI + N +KIGDFGL K L D++ + G
Sbjct: 155 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP---QDKEYYKVKEPGESP 211
Query: 589 VDGTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQ 647
+ F+ APE + + K +D++S G+V L+ F+ + + ++ +
Sbjct: 212 I---------FWYAPESLTES--KFSVASDVWSFGVV---LYELFTYIEKSKSPPAEFMR 257
Query: 648 KGELPPSWVAKFSEQESLLRR----------------LM----SPSPSDRPSATELLQD 686
LL+ +M + + + RPS +L
Sbjct: 258 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR 316
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 2e-19
Identities = 72/328 (21%), Positives = 118/328 (35%), Gaps = 84/328 (25%)
Query: 386 LQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
LQ LG G FG V +C+ + AVKK L+ + RE+ L LQH +
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
+V+Y GV + L + MEY
Sbjct: 73 IVKYK------GV----------------------------CYSAGRR----NLKLIMEY 94
Query: 502 CPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
P +LR + + + D QI +G+ ++ + IHRDL NI + N +K
Sbjct: 95 LPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 154
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADM 618
IGDFGL K L D++ + G + F+ APE + + K +D+
Sbjct: 155 IGDFGLTKVLP---QDKEFFKVKEPGESPI---------FWYAPESLTES--KFSVASDV 200
Query: 619 YSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRR---------- 668
+S G+V L+ F+ + + ++ + LL+
Sbjct: 201 WSFGVV---LYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGC 257
Query: 669 ------LM----SPSPSDRPSATELLQD 686
+M + + + RPS +L
Sbjct: 258 PDEIYMIMTECWNNNVNQRPSFRDLALR 285
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 91.4 bits (227), Expect = 2e-19
Identities = 52/256 (20%), Positives = 93/256 (36%), Gaps = 69/256 (26%)
Query: 389 LGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 446
+G G +GHV K K D + YA+K+I ++ RE+A L L+H +V+
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG----ISMSACREIALLRELKHPNVISLQ 84
Query: 447 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTL 506
+ ++ +++ +Y L
Sbjct: 85 KV----------------------------------FLSHADR----KVWLLFDYAEHDL 106
Query: 507 RQVFESYDH---------FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
+ + + + + L QI++G+ ++H ++HRDL P NI
Sbjct: 107 WHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGP 166
Query: 558 ----IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613
+KI D G A+ P D V T++Y APE+ G
Sbjct: 167 ERGRVKIADMGFARLFNS---------PLKPLA---DLDPVVVTFWYRAPELLLGARHYT 214
Query: 614 EKADMYSLGIVFFELW 629
+ D++++G +F EL
Sbjct: 215 KAIDIWAIGCIFAELL 230
|
| >1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1 Length = 434 | Back alignment and structure |
|---|
Score = 90.7 bits (226), Expect = 4e-19
Identities = 71/463 (15%), Positives = 148/463 (31%), Gaps = 92/463 (19%)
Query: 751 DTELRDYVVQVTKEMFRQHCAKHLE---IEPMYLL----GDCPQFKRNTV-----KLLTH 798
D ++ ++ + +E + ++ +E + L G+ + +
Sbjct: 19 DMDVEKFIFKTAEEAAEAFGFRRIDFPSLEYLDLYRIKSGE-------ELLQQTYSFVDK 71
Query: 799 GGDLLELSHELRLPFIRWAISNQKSS--FKRYEISSVYRRAIGHSPPN--RY---LQGDF 851
GG + L E +R S + + Y V+R + P RY Q +
Sbjct: 72 GGREVTLIPEATPSTVRMVTSRKDLQRPLRWYSFPKVWR----YEEPQAGRYREHYQFNA 127
Query: 852 DIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAE 911
DI G S +AEV+ + I+ R + +I +N ++E I G+ + V
Sbjct: 128 DIFGSDSPEADAEVIALASSILDRLGLQDIYEIRINSRKIMEEI--IGGMTSSDPFSVFS 185
Query: 912 LLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRG 971
++ + + L+ + E V+ + + + + + +
Sbjct: 186 IIDRYHKISREEF----------VDQLRSAGIGEDGVSMIADL-----CSGTRGIDEMAR 230
Query: 972 ALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFF---------QVFSVKE 1022
+ + + + +++ + VF +
Sbjct: 231 ITGKSSEEIARMAAVED---------LLASY--GVKNVRYDFSIVRGLSYYTGIVFEAYD 279
Query: 1023 KYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPP-SGVGASLALETII---QHY 1078
+ +L GGRYD L M + VG + I +
Sbjct: 280 RSGQ---FRAILG-GGRYDNLASLM-----------SGESVPAVGFGMGDAVISLLLKRE 324
Query: 1079 PVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYA 1138
V SV +C G E +L E + + + L+ Q +YA
Sbjct: 325 NVQIP----REKKSVYICRVGKINSS-IMNEYSRKLRERGMNVTVEIM-ERGLSAQLKYA 378
Query: 1139 SEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFL 1181
S VI + ++G+V +R++ ++ V +S+V L
Sbjct: 379 SAIGADFAVIFGERDLERGVVTIRNMYTGSQENVGLDSVVEHL 421
|
| >3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans} Length = 400 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 2e-18
Identities = 59/356 (16%), Positives = 116/356 (32%), Gaps = 58/356 (16%)
Query: 794 KLLTHGGDLLELSHELRLPFIRWAISNQKSS---FKRYEISSVYRRAIGHSPP--NRY-- 846
KLL G+ L L ++ P R S+ K + S+VYR +
Sbjct: 70 KLLDQQGNTLVLRPDMTAPIARLVASSLKDRAYPLRLAYQSNVYR----AQQNEGGKPAE 125
Query: 847 -LQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEH 905
Q ++IG +A + EV+ + + + R + + H + A+ +
Sbjct: 126 FEQLGVELIGDGTASADGEVIALMIAALKR-AGLSEFKVAIGHVGYVNALLMDVVGNEQR 184
Query: 906 REKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQA 965
+++ L K V R+ ++ LNL+ +RL + L G A
Sbjct: 185 ADRLRRFLY-------------EKNYVGYREHVKSLNLSTIDKSRLMNL-LSLRGGRA-A 229
Query: 966 LPRLRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSV 1020
+ R L + + AL E+ L + + + D + SY+ + F+ +
Sbjct: 230 IEEAR-GLIQTEKGKTALAEMTKLYEVLESYGASEYVKFDLTLVLHMSYYTGVVFEGYG- 287
Query: 1021 KEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV 1080
+ L GGRYD LL + P G + ++ +++
Sbjct: 288 -NRLGVP------LCSGGRYDELLSKF-----------HRPAQATGFGVRIDLLVEALNG 329
Query: 1081 DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYE 1136
+ +E + E +EL + + + +
Sbjct: 330 EIISNGHEQ---TCILF--SNERRFEAIELARKKRANGEAVVLQDLAGVTDVDAMS 380
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 1e-17
Identities = 71/350 (20%), Positives = 125/350 (35%), Gaps = 96/350 (27%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDR-ILREVATLS 435
+ ++ LG G FG V LC+ +G + AVK LK +S + + +E+ L
Sbjct: 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKS--LKPESGGNHIADLKKEIEILR 78
Query: 436 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 495
L H+++V+Y G+ T +
Sbjct: 79 NLYHENIVKYK------GI----------------------------CTEDGGNG----I 100
Query: 496 YIQMEYCPR-TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 553
+ ME+ P +L++ + + + QI +G+ ++ + +HRDL N+ +
Sbjct: 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE 160
Query: 554 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKI 612
+ + +KIGDFGL K + + D++ D V F+ APE + Q K
Sbjct: 161 SEHQVKIGDFGLTKAI---ETDKEYYTVKDDRDSPV---------FWYAPECLMQS--KF 206
Query: 613 DEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRR---- 668
+D++S G+ EL T + L K P + + L+
Sbjct: 207 YIASDVWSFGVTLHELL----TYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRL 262
Query: 669 ------------LM----SPSPSDRPSATELLQDALPPQMEYELLDNILR 702
LM PS+R S L E + +L+
Sbjct: 263 PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNL----------IEGFEALLK 302
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 84.7 bits (210), Expect = 2e-17
Identities = 63/334 (18%), Positives = 119/334 (35%), Gaps = 116/334 (34%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND---------RILRE 430
L DF+ L+ +G G + V+L + K R YA+ ++ +K + + ++ + +
Sbjct: 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAM-RV-VKKELVNDDEDIDWVQTEKHVFEQ 108
Query: 431 VATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKL 490
+ H +V + F+T
Sbjct: 109 AS-----NHPFLVGLHSC-FQT-------------------------------------- 124
Query: 491 ESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQ--------------IVEGLAHIH 536
+ L+ +EY +L +H+ RQ I L ++H
Sbjct: 125 -ESRLFFVIEYVN-------------GGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 170
Query: 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 596
+GII+RDL +N+ D+ IK+ D+G+ K E L T T G
Sbjct: 171 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK----EGLRPGD--TTST---------FCG 215
Query: 597 TYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQ---- 647
T Y APEI + + D ++LG++ FE+ PF + +
Sbjct: 216 TPNYIAPEILRGEDY---GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 272
Query: 648 ---KGELP-PSWVAKFSEQESLLRRLMSPSPSDR 677
+ ++ P ++ + S+L+ ++ P +R
Sbjct: 273 VILEKQIRIPRSLSV--KAASVLKSFLNKDPKER 304
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429 | Back alignment and structure |
|---|
Score = 84.8 bits (210), Expect = 3e-17
Identities = 59/266 (22%), Positives = 91/266 (34%), Gaps = 84/266 (31%)
Query: 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL 437
RY E L+ +G G FG VV + +H A+K +R + + + E+ L L
Sbjct: 98 RY----EVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFH---RQAAEEIRILEHL 150
Query: 438 QHQ------HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 491
+ Q +V+ + F F N
Sbjct: 151 RKQDKDNTMNVIHMLE-NFT---------------------FRN---------------- 172
Query: 492 STYLYIQMEYCPRTLRQVFE--SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 549
++ + E L ++ + + F L I++ L +H IIH DL P N
Sbjct: 173 --HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPEN 230
Query: 550 IFF--DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTY----FYTAP 603
I R+ IK+ DFG + + +V TY FY AP
Sbjct: 231 ILLKQQGRSGIKVIDFGSSCYE----------------------HQRVYTYIQSRFYRAP 268
Query: 604 EIEQGWPKIDEKADMYSLGIVFFELW 629
E+ G DM+SLG + EL
Sbjct: 269 EVILGAR-YGMPIDMWSLGCILAELL 293
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 83.2 bits (206), Expect = 3e-17
Identities = 81/356 (22%), Positives = 120/356 (33%), Gaps = 107/356 (30%)
Query: 386 LQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
+ LG G FG V LC+ G + AVK+ L+ RE+ L L
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQ--LQHSGPDQQRDFQREIQILKALHSDF 85
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
+V+Y GV+ G L + MEY
Sbjct: 86 IVKYR------GVSYGPGRQS--------------------------------LRLVMEY 107
Query: 502 CPR-TLRQ-VFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
P LR + D QI +G+ ++ + +HRDL NI ++ +K
Sbjct: 108 LPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVK 167
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADM 618
I DFGLAK L LD+D + G + F+ APE + ++D+
Sbjct: 168 IADFGLAKLL---PLDKDYYVVREPGQSPI---------FWYAPESLSDN--IFSRQSDV 213
Query: 619 YSLGIVFFELW-----------------HPFSTAMERQIVLSDLKQKGELP-----PSWV 656
+S G+V +EL+ +L L++ LP P+ V
Sbjct: 214 WSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEV 273
Query: 657 AKFSEQESLLRRLM----SPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSE 708
LM +PSP DRPS + L LD + E
Sbjct: 274 ----------HELMKLCWAPSPQDRPSFSALGPQ----------LDMLWSGSRGCE 309
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373 | Back alignment and structure |
|---|
Score = 83.6 bits (207), Expect = 4e-17
Identities = 53/276 (19%), Positives = 91/276 (32%), Gaps = 82/276 (29%)
Query: 374 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVAT 433
+RY ++ LG G F V L K+ ++ H A+K +R + E+
Sbjct: 16 YKDARY----ILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV---YTEAAEDEIKL 68
Query: 434 LSRLQ-----------HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSAD 482
L R+ H+++ F + G
Sbjct: 69 LQRVNDADNTKEDSMGANHILKLLD-HF-----NHKGP---------------------- 100
Query: 483 VTGQENKLESTYLYIQMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQ-G 539
++ + E L + + Y+H + +Q++ GL ++H + G
Sbjct: 101 --------NGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG 152
Query: 540 IIHRDLTPNNIFFD------ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTG 593
IIH D+ P N+ + IKI D G A + T
Sbjct: 153 IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY------------------TN 194
Query: 594 QVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW 629
+ T Y +PE+ G P AD++S + FEL
Sbjct: 195 SIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELI 229
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 1e-16
Identities = 65/323 (20%), Positives = 112/323 (34%), Gaps = 87/323 (26%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
D + +G G FG V + + D AVK R + + + L+E L + H
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEARILKQYSHP 172
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
++VR GV T ++ +YI ME
Sbjct: 173 NIVRLI------GV----------------------------CTQKQ------PIYIVME 192
Query: 501 YCPR-----TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 555
LR + + G+ ++ + IHRDL N +
Sbjct: 193 LVQGGDFLTFLR---TEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEK 249
Query: 556 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF---YTAPE-IEQGWPK 611
N +KI DFG+++ D + G Q +TAPE + G +
Sbjct: 250 NVLKISDFGMSREEA------------DGVYAASGGLRQ----VPVKWTAPEALNYG--R 291
Query: 612 IDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQ 662
++D++S GI+ +E + P+ + Q +++ G LP P V +
Sbjct: 292 YSSESDVWSFGILLWETFSLGASPYP-NLSNQQTREFVEKGGRLPCPELCPDAVFR---- 346
Query: 663 ESLLRRLMSPSPSDRPSATELLQ 685
L+ + + P RPS + + Q
Sbjct: 347 --LMEQCWAYEPGQRPSFSTIYQ 367
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 2e-16
Identities = 76/328 (23%), Positives = 114/328 (34%), Gaps = 86/328 (26%)
Query: 386 LQPLGHGGFGHVVLCK----NKLDGRHYAVKKIRLKDKSLPVNDR-ILREVATLSRLQHQ 440
++ LG G FG V L N G AVK LK + P + +E+ L L H+
Sbjct: 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKA--LKADAGPQHRSGWKQEIDILRTLYHE 93
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
H+++Y G + G + L + ME
Sbjct: 94 HIIKYK------GCCEDAGAAS--------------------------------LQLVME 115
Query: 501 YCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
Y P +LR + +L +QI EG+A++H Q IHRDL N+ D +K
Sbjct: 116 YVPLGSLRDYLPRHSIGLAQL-LLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVK 174
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADM 618
IGDFGLAK + + + G V F+ APE +++ K +D+
Sbjct: 175 IGDFGLAKAVP---EGHEYYRVREDGDSPV---------FWYAPECLKEY--KFYYASDV 220
Query: 619 YSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRR---------- 668
+S G+ +EL T + + LL R
Sbjct: 221 WSFGVTLYELL----THCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKC 276
Query: 669 ------LM----SPSPSDRPSATELLQD 686
LM S RP+ L+
Sbjct: 277 PAEVYHLMKNCWETEASFRPTFENLIPI 304
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382 | Back alignment and structure |
|---|
Score = 79.4 bits (196), Expect = 1e-15
Identities = 55/263 (20%), Positives = 86/263 (32%), Gaps = 82/263 (31%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ-- 440
+E +G G FG VV ++++ A+K I+ K L ++ EV L +
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFL---NQAQIEVRLLELMNKHDT 112
Query: 441 ----HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 496
++V + F F N +L
Sbjct: 113 EMKYYIVHLKR-HFM---------------------FRN------------------HLC 132
Query: 497 IQMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQ--GIIHRDLTPNNIFF 552
+ E L + + + L +Q+ L + IIH DL P NI
Sbjct: 133 LVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILL 192
Query: 553 --DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTY----FYTAPEIE 606
R+ IKI DFG + L ++ Y FY +PE+
Sbjct: 193 CNPKRSAIKIVDFGSSCQL----------------------GQRIYQYIQSRFYRSPEVL 230
Query: 607 QGWPKIDEKADMYSLGIVFFELW 629
G P D DM+SLG + E+
Sbjct: 231 LGMP-YDLAIDMWSLGCILVEMH 252
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 78.8 bits (193), Expect = 1e-15
Identities = 51/331 (15%), Positives = 93/331 (28%), Gaps = 44/331 (13%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR------ILREVATL 434
+ + +G G FG V A+K I ++ L IL E+
Sbjct: 20 EKLQRCEKIGEGVFGEVFQTIAD--HTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIIS 77
Query: 435 SRLQ---------HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTG 485
L + + G W N SA+
Sbjct: 78 KELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAW--------DHYNSTKGSANDRP 129
Query: 486 QENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRD 544
K + ++ ++ E+ L Q+ A + Q+ LA HRD
Sbjct: 130 DFFKDDQLFIVLEFEFGGIDLEQMRTKL--SSLATAKSILHQLTASLAVAEASLRFEHRD 187
Query: 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 604
L N+ + K+ K + + T V +
Sbjct: 188 LHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDED 247
Query: 605 IEQGWPKIDEKADMYSL----GIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFS 660
+ G D + D+Y L + +HP+S + + + ++
Sbjct: 248 LFTG--DGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAM 305
Query: 661 EQ-----ESLLRRLMSPSPSDRPSATELLQD 686
+Q + R +++ S SAT+LL
Sbjct: 306 KQIKRKIQEFHRTMLNFS-----SATDLLCQ 331
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 76.1 bits (188), Expect = 5e-15
Identities = 73/337 (21%), Positives = 117/337 (34%), Gaps = 100/337 (29%)
Query: 389 LGHGGFGHVVLCKNKLDGRHY-----AVKKIRLKDKSLP-VNDRILREVATLSRLQHQHV 442
LG G FG V + + D AVK ++ S P D +REV + L H+++
Sbjct: 26 LGDGSFGVV--RRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
+R Y GV V + + E
Sbjct: 84 IRLY------GV----------------------------VLTPP-------MKMVTELA 102
Query: 503 PR-----TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
P LR + HF Q+ EG+ ++ + IHRDL N+ R+
Sbjct: 103 PLGSLLDRLR---KHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL 159
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKA 616
+KIGDFGL + L + D + V + APE ++ +
Sbjct: 160 VKIGDFGLMRALP---QNDDHYVMQEHRKVPF---------AWCAPESLKTR--TFSHAS 205
Query: 617 DMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGE-LP-----PSWVAKFSEQESLL 666
D + G+ +E++ P+ + +L + ++GE LP P +
Sbjct: 206 DTWMFGVTLWEMFTYGQEPWI-GLNGSQILHKIDKEGERLPRPEDCPQDI---------- 254
Query: 667 RRLM----SPSPSDRPSATEL---LQDALPPQMEYEL 696
+M + P DRP+ L L +A P M E
Sbjct: 255 YNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMRAEF 291
|
| >3rac_A Histidine-tRNA ligase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, PSI-BIO; 2.30A {Alicyclobacillus acidocaldarius subsp} Length = 373 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 5e-15
Identities = 63/353 (17%), Positives = 98/353 (27%), Gaps = 56/353 (15%)
Query: 751 DTELRDYVVQVTKEMFRQHCAKHLEIEP-------MYLLGDCPQFKRNTVKLLTHGGDLL 803
+ R V + + L P+ R+ ++L GGD +
Sbjct: 36 FAKRRRAVETRLLSFVEDAGYE--PVTSGLFEYVDTLLRARSPESSRDWIRLFDGGGDAV 93
Query: 804 ELSHELRLPFIRWAISNQKSS---FKRYEISSVYRR----AIGHSPPNRY---LQGDFDI 853
L E+ R A + + VYRR A + Q +
Sbjct: 94 ALRPEMTPSIARMAAPRVAAGRTPIRWCYCERVYRRTDDPASLSWASGKAAESTQVGIER 153
Query: 854 IGG-ASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAEL 912
IG AS + +VL++ + I ++H L+ + GI A
Sbjct: 154 IGEEASVDVDMDVLRLLHEASAAA-GVRHHRIVVSHARLVPRLLDALGISASLSRAFLAC 212
Query: 913 LAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGA 972
L Q E LL L +AL R
Sbjct: 213 LTSGN--YVQFRELWQLHAAKDVDLLANLLTWSPAERDAAKRSREASDRELEALLRDAVD 270
Query: 973 LPADKPTRKALDEL-----YLRIWRI-EKNIYIDALMPPIE----SYHRNLFFQVFSVKE 1022
A R A L L + + D Y+ L F++F+
Sbjct: 271 PRAAADVRDAWRYLCRLAEALHDSGLASDVVTFD----LALHRELDYYTGLVFEMFA--P 324
Query: 1023 KYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETII 1075
A +A GGRYD LL + P VG + +E ++
Sbjct: 325 GVGAP------IAQGGRYDELLAQF---------GAGAP--AVGFAFEVERVM 360
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 76.5 bits (189), Expect = 6e-15
Identities = 63/342 (18%), Positives = 114/342 (33%), Gaps = 98/342 (28%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDRILREVATLSR 436
+F++++ LG G FG V +G A+K++R + S N IL E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMAS 73
Query: 437 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 496
+ + HV R G+ +
Sbjct: 74 VDNPHVCRLL------GI----------------------------CLTST-------VQ 92
Query: 497 IQMEYCPR-TLRQ-VFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 554
+ + P L V E D+ + + QI +G+ ++ + ++HRDL N+
Sbjct: 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 152
Query: 555 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKID 613
+KI DFGLAK L ++ + + G V + + A E I
Sbjct: 153 PQHVKITDFGLAKLLG----AEEKEYHAEGGKVPI---------KWMALESILHR--IYT 197
Query: 614 EKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQES 664
++D++S G+ +EL P+ + + S L++ LP
Sbjct: 198 HQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQPPICTID--------- 247
Query: 665 LLRRLM----SPSPSDRPSATELLQDALPPQMEYELLDNILR 702
+ +M RP EL+ + R
Sbjct: 248 -VYMIMRKCWMIDADSRPKFRELI----------IEFSKMAR 278
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 74.9 bits (185), Expect = 2e-14
Identities = 48/192 (25%), Positives = 78/192 (40%), Gaps = 45/192 (23%)
Query: 530 EGLAHIHGQG---IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 586
GLA++H IIHRD+ NI D + +GDFGLAK
Sbjct: 142 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-----------MDYKDTH 190
Query: 587 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL------WHPFSTAMERQI 640
V+ T GT + APE K EK D++ G++ EL + A + +
Sbjct: 191 VT---TAVRGTIGHIAPEYLS-TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 246
Query: 641 VLSD----LKQKGELP----PSWVAKFSEQESLLRRLM-------SPSPSDRPSATELLQ 685
+L D L ++ +L + ++E + +L+ SP +RP +E+++
Sbjct: 247 MLLDWVKGLLKEKKLEALVDVDLQGNYKDEE--VEQLIQVALLCTQSSPMERPKMSEVVR 304
Query: 686 ----DALPPQME 693
D L + E
Sbjct: 305 MLEGDGLAERWE 316
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 54.1 bits (131), Expect = 1e-07
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKL-DGRHYAVKKIRLKDKSLPVNDR-ILREVATLSRLQ 438
++F LG GGFG V K +L DG AVK RLK++ + EV +S
Sbjct: 30 DNFSNKNILGRGGFGKVY--KGRLADGTLVAVK--RLKEERTQGGELQFQTEVEMISMAV 85
Query: 439 HQHVVR 444
H++++R
Sbjct: 86 HRNLLR 91
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 76.0 bits (187), Expect = 2e-14
Identities = 69/357 (19%), Positives = 124/357 (34%), Gaps = 111/357 (31%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
D LG G +G V K AVK LK+ ++ V + L+E A + ++H
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEVEE-FLKEAAVMKEIKHP 276
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
++V+ GV T YI E
Sbjct: 277 NLVQLL------GV----------------------------CT------REPPFYIITE 296
Query: 501 YCPRT-----LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 555
+ LR+ + + ++ QI + ++ + IHR+L N
Sbjct: 297 FMTYGNLLDYLRE--CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGEN 354
Query: 556 NDIKIGDFGLAKFLKLEQ--LDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKI 612
+ +K+ DFGL++ + + A FP +TAPE + K
Sbjct: 355 HLVKVADFGLSRLMTGDTYTAHAGAKFP----------------IKWTAPESLAYN--KF 396
Query: 613 DEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQE 663
K+D+++ G++ +E+ P+ ++ V L++ + P V +
Sbjct: 397 SIKSDVWAFGVLLWEIATYGMSPYP-GIDLSQVYELLEKDYRMERPEGCPEKVYE----- 450
Query: 664 SLLRRLM----SPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIYDKV 716
LM +PSDRPS E+ Q + + + ++SI D+V
Sbjct: 451 -----LMRACWQWNPSDRPSFAEIHQA----------FETMFQ------ESSISDEV 486
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 74.8 bits (184), Expect = 3e-14
Identities = 45/280 (16%), Positives = 92/280 (32%), Gaps = 56/280 (20%)
Query: 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 446
+ +G GGFG + L A ++++ + + E+ R+ +
Sbjct: 43 KKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENG---PLFSELKFYQRVAKKD---CI 96
Query: 447 QAWFETGVADFDG-DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT 505
+ W E D+ G +GSG +Y ++ ME
Sbjct: 97 KKWIERKQLDYLGIPLFYGSGLTEFK-------------------GRSYRFMVMERLGID 137
Query: 506 LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND--IKIGDF 563
L+++ F K L ++++ L +IH +H D+ N+ +N + + D+
Sbjct: 138 LQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADY 197
Query: 564 GLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA----PEIEQGWPKIDEKADMY 619
GL+ + + + G GT +T+ + ++D+
Sbjct: 198 GLSYRYCPNGNHKQ--YQEN------PRKGHNGTIEFTSLDAHKGVALSR-----RSDVE 244
Query: 620 SLGIVFFEL------WH-----PFSTAMERQIVLSDLKQK 648
LG W P + + +L +L Q
Sbjct: 245 ILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQS 284
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 3e-14
Identities = 69/372 (18%), Positives = 130/372 (34%), Gaps = 92/372 (24%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDRILREVATLSR 436
+F++++ LG G FG V +G A+K++R + S N IL E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMAS 73
Query: 437 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 496
+ + HV R G+ +
Sbjct: 74 VDNPHVCRLL------GI----------------------------CLTST-------VQ 92
Query: 497 IQMEYCPR-TLRQ-VFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 554
+ + P L V E D+ + + QI +G+ ++ + ++HRDL N+
Sbjct: 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 152
Query: 555 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKID 613
+KI DFGLAK L ++ + + G V + + A E I
Sbjct: 153 PQHVKITDFGLAKLLG----AEEKEYHAEGGKVPIK---------WMALESILHR--IYT 197
Query: 614 EKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQES 664
++D++S G+ +EL P+ + + S L++ LP
Sbjct: 198 HQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQPPICTID--------- 247
Query: 665 LLRRLM----SPSPSDRPSATELLQD----ALPPQMEYELLDNILRMMHSSEDTSIYDKV 716
+ +M RP EL+ + A PQ + + + S D++ Y +
Sbjct: 248 -VYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSNFYRAL 306
Query: 717 VSSIFDEETLDM 728
+ ++ +D
Sbjct: 307 MDEEDMDDVVDA 318
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 9e-14
Identities = 68/340 (20%), Positives = 121/340 (35%), Gaps = 91/340 (26%)
Query: 389 LGHGGFGHVVLCKNKLDGRHY---AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRY 445
+G G G V + ++ G+ A+K ++ + L E + + + H +++R
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALK-AGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 446 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT 505
GV VT I EY
Sbjct: 116 E------GV----------------------------VTRGRL------AMIVTEYMENG 135
Query: 506 -----LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 560
LR F + R + G+ ++ G +HRDL N+ D+ K+
Sbjct: 136 SLDTFLRT---HDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKV 192
Query: 561 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADMY 619
DFGL++ L + D DAA+ T G + + +TAPE I +D++
Sbjct: 193 SDFGLSRVL---EDDPDAAYTTTGGKIPIR---------WTAPEAIAFR--TFSSASDVW 238
Query: 620 SLGIVFFELW----HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM----S 671
S G+V +E+ P+ M + V+S +++ LP + L +LM
Sbjct: 239 SFGVVMWEVLAYGERPYW-NMTNRDVISSVEEGYRLPAPMGCPHA-----LHQLMLDCWH 292
Query: 672 PSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTS 711
+ RP +++ +LD ++R S T+
Sbjct: 293 KDRAQRPRFSQI----------VSVLDALIRSPESLRATA 322
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 1e-13
Identities = 49/252 (19%), Positives = 88/252 (34%), Gaps = 69/252 (27%)
Query: 387 QPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+ LG G FG V K + AVK ++ + + D +L E + +L + ++
Sbjct: 23 KELGSGNFGTV--KKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
VR G+ + + ME
Sbjct: 81 VRMI------GI----------------------------CEAES-------WMLVMEMA 99
Query: 503 PR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 561
L + + H + L Q+ G+ ++ +HRDL N+ ++ KI
Sbjct: 100 ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS 159
Query: 562 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF---YTAPE-IEQGWPKIDEKAD 617
DFGL+K L + D++ Q + + APE I K K+D
Sbjct: 160 DFGLSKAL---RADENYY------------KAQTHGKWPVKWYAPECINYY--KFSSKSD 202
Query: 618 MYSLGIVFFELW 629
++S G++ +E +
Sbjct: 203 VWSFGVLMWEAF 214
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 71.8 bits (177), Expect = 2e-13
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 531 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 590
G+ +H IHRD+ NI D KI DFGLA+ + +V
Sbjct: 145 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARAS-------------EKFAQTVM 191
Query: 591 GTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 628
+ VGT Y APE +G +I K+D+YS G+V E+
Sbjct: 192 TSRIVGTTAYMAPEALRG--EITPKSDIYSFGVVLLEI 227
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 1e-05
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 389 LGHGGFGHVVLCKNKLDGRHYAVKK--IRLKDKSLPVNDRILREVATLSRLQHQHVVR 444
+G GGFG V K ++ AVKK + + + + +E+ +++ QH+++V
Sbjct: 39 MGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 94
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 73.3 bits (180), Expect = 2e-13
Identities = 78/382 (20%), Positives = 130/382 (34%), Gaps = 106/382 (27%)
Query: 348 FHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEEL---QPLGHGGFGHVVLCKNKL 404
++ K + S L + E L LG G FG V
Sbjct: 148 YYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEV--WMGTW 205
Query: 405 DGRHY-AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 463
+G A+K LK ++ L+E + +L+H+ +V+ Y V
Sbjct: 206 NGTTRVAIKT--LKPGTMSPEA-FLQEAQVMKKLRHEKLVQLY------AV--------- 247
Query: 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT-----LRQVFESYDHFDK 518
V+ + +YI EY + L+ Y +
Sbjct: 248 -------------------VSEE-------PIYIVTEYMSKGSLLDFLKGETGKYLRLPQ 281
Query: 519 ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQ--LDQ 576
+ QI G+A++ +HRDL NI K+ DFGLA+ ++ + Q
Sbjct: 282 LVDM--AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 577 DAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELW----HP 631
A FP +TAPE G + K+D++S GI+ EL P
Sbjct: 340 GAKFP----------------IKWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVP 381
Query: 632 FSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQESLLRRLM----SPSPSDRPSATE 682
+ M + VL +++ +P P + LM P +RP+
Sbjct: 382 YP-GMVNREVLDQVERGYRMPCPPECPESLHD----------LMCQCWRKEPEERPTFEY 430
Query: 683 L---LQDALP-PQMEYELLDNI 700
L L+D + +Y+ +N+
Sbjct: 431 LQAFLEDYFTSTEPQYQPGENL 452
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 2e-13
Identities = 61/353 (17%), Positives = 104/353 (29%), Gaps = 102/353 (28%)
Query: 386 LQPLGHGGFGHVVLCKNKLDGRHY---AVKKIRLKDKSLPVNDRI--LREVATLSRLQHQ 440
+ LG G FG V + K + + AVK LK + +D LRE A + H
Sbjct: 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKM--LKADIIASSDIEEFLREAACMKEFDHP 85
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
HV + GV K + +
Sbjct: 86 HVAKLV------GV----------------------------SLRSRAKGRLPIPMVILP 111
Query: 501 YCP--------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
+ R ++ + L I G+ ++ + IHRDL N
Sbjct: 112 FMKHGDLHAFLLASRIGENPFNLPLQTLV-RFMVDIACGMEYLSSRNFIHRDLAARNCML 170
Query: 553 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPK 611
+ + DFGL++ + D + V + A E +
Sbjct: 171 AEDMTVCVADFGLSRKIY----SGDYYRQGCASKLPVK---------WLALESLADN--L 215
Query: 612 IDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGEL------PPSWVAKFSE 661
+D+++ G+ +E+ P++ +E + + L L
Sbjct: 216 YTVHSDVWAFGVTMWEIMTRGQTPYA-GIENAEIYNYLIGGNRLKQPPECMEE------- 267
Query: 662 QESLLRRLM----SPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDT 710
+ LM S P RPS T L + L+NIL + +
Sbjct: 268 ----VYDLMYQCWSADPKQRPSFTCLRME----------LENILGHLSVLSTS 306
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 2e-13
Identities = 47/176 (26%), Positives = 72/176 (40%), Gaps = 37/176 (21%)
Query: 531 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG-VSV 589
GL ++H + IIHRD+ NI D KI DFG++K +S
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK-----------KGTELDQTHLS- 198
Query: 590 DGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMER-QIVLSD- 644
T GT Y PE ++ EK+D+YS G+V FE+ ++ R + L++
Sbjct: 199 --TVVKGTLGYIDPEYFI-KGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEW 255
Query: 645 ---LKQKGELP----PSWVAKFSEQESLLRRLM-------SPSPSDRPSATELLQD 686
G+L P+ K + LR+ + S DRPS ++L
Sbjct: 256 AVESHNNGQLEQIVDPNLADKIRPES--LRKFGDTAVKCLALSSEDRPSMGDVLWK 309
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 3e-06
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 15/103 (14%)
Query: 353 VSSRVSQFWKPSVDSGSPNMSLPSSRYL----------NDFEELQPLGHGGFGHVVLCKN 402
+ S+ S+ D+ S + +P Y N+F+ +GHG FG V K
Sbjct: 1 MGSKYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVY--KG 58
Query: 403 KL-DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 444
L DG A+K R +S + E+ TLS +H H+V
Sbjct: 59 VLRDGAKVALK--RRTPESSQGIEEFETEIETLSFCRHPHLVS 99
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 2e-13
Identities = 70/334 (20%), Positives = 121/334 (36%), Gaps = 95/334 (28%)
Query: 389 LGHGGFGHVVLCKNKLDGRHY---AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRY 445
+G G FG V + KL + A+K ++ + L E + + + H +++R
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 446 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR- 504
GV VT + + I EY
Sbjct: 112 E------GV----------------------------VTKSKP------VMIVTEYMENG 131
Query: 505 TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDF 563
+L +D F + R I G+ ++ G +HRDL NI ++ K+ DF
Sbjct: 132 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 191
Query: 564 GLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLG 622
GL + L + D +AA+ T G + + +T+PE I K +D++S G
Sbjct: 192 GLGRVL---EDDPEAAYTTRGGKIPIR---------WTSPEAIAYR--KFTSASDVWSYG 237
Query: 623 IVFFELWH----PFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQESLLRRLM--- 670
IV +E+ P+ M Q V+ + + LP P + L +LM
Sbjct: 238 IVLWEVMSYGERPYW-EMSNQDVIKAVDEGYRLPPPMDCP----------AALYQLMLDC 286
Query: 671 -SPSPSDRPSATELLQDALPPQMEYELLDNILRM 703
++RP ++ +LD ++R
Sbjct: 287 WQKDRNNRPKFEQI----------VSILDKLIRN 310
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 3e-13
Identities = 66/343 (19%), Positives = 105/343 (30%), Gaps = 118/343 (34%)
Query: 386 LQPLGHGGFGHVVLC--KNKLDGRHY---AVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
+ LG G FG V L N + AVK LKD +L RE L+ LQH+
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKA--LKDPTLAARKDFQREAELLTNLQHE 77
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
H+V++Y GV + L + E
Sbjct: 78 HIVKFY------GV----------------------------CG------DGDPLIMVFE 97
Query: 501 YCP--------RTLRQVFESYDHFDKELAWHLF---------RQIVEGLAHIHGQGIIHR 543
Y R A QI G+ ++ Q +HR
Sbjct: 98 YMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHR 157
Query: 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQD-------AAFPTDTGGVSVDGTGQVG 596
DL N A +KIGDFG+++ + D P +
Sbjct: 158 DLATRNCLVGANLLVKIGDFGMSRDV----YSTDYYRVGGHTMLP-----IR-------- 200
Query: 597 TYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGEL 651
+ PE I K ++D++S G++ +E++ P+ + V+ + Q L
Sbjct: 201 ---WMPPESIMYR--KFTTESDVWSFGVILWEIFTYGKQPWF-QLSNTEVIECITQGRVL 254
Query: 652 P-----PSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQ 685
P + +M P R + E+ +
Sbjct: 255 ERPRVCPKE----------VYDVMLGCWQREPQQRLNIKEIYK 287
|
| >1usy_A ATP phosphoribosyltransferase regulatory subunit; aminoacyl-tRNA synthetase; HET: HIS; 2.52A {Thermotoga maritima} SCOP: d.104.1.1 PDB: 1usy_C* Length = 275 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 4e-13
Identities = 38/260 (14%), Positives = 74/260 (28%), Gaps = 49/260 (18%)
Query: 794 KLLTHGGDLLELSHELRLPFIRWAISNQKSS-FKRYEISSVYRRAIGHSPPNRYLQGDFD 852
L G+L + + + S K + VYR + Q +
Sbjct: 39 FFLDRKGNLFSIREDFTKTVLNHRKRYSPDSQIKVWYADFVYRYSGSD--LVAEYQLGLE 96
Query: 853 IIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAEL 912
+ S EVL++ ++ + F + + H + E + I + EKV L
Sbjct: 97 KVPRNSLDDSLEVLEIIVESASE-FFEGPVIVEIGHTGVYEDL--LKEIPKDLHEKVLNL 153
Query: 913 LAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGA 972
+ +K + L + + V ++ R +
Sbjct: 154 I-------------DTKNLAEIEFLSHMKKIDLSRVEKI------------IEDSIYRRS 188
Query: 973 ---LPADKPTRKALDEL-----YLRIWRIEKNIYID-ALMPPIESYHRNLFFQVFSVKEK 1023
L ++L +L+ ++ ID L I + L F ++
Sbjct: 189 PEHLKTMDLPLSVREDLLSASSFLQEKFPTVSVEIDLTLARTI-EEYCGLIFTIYDTSSS 247
Query: 1024 YPATLVEGTLLAVGGRYDYL 1043
+A GG Y
Sbjct: 248 RL--------VAAGGEYTVN 259
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 5e-13
Identities = 63/342 (18%), Positives = 115/342 (33%), Gaps = 107/342 (31%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
+ + LQ +G G FG V G AVK +K+ + L E + +++L+H
Sbjct: 21 KELKLLQTIGKGEFGDV--MLGDYRGNKVAVKC--IKNDATA--QAFLAEASVMTQLRHS 74
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
++V+ GV + ++ LYI E
Sbjct: 75 NLVQLL------GV----------------------------IVEEKG-----GLYIVTE 95
Query: 501 YCPRT-----LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 555
Y + LR + + E + ++ G +HRDL N+
Sbjct: 96 YMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSED 153
Query: 556 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDE 614
N K+ DFGL K + P +TAPE + + K
Sbjct: 154 NVAKVSDFGLTK--EASSTQDTGKLP----------------VKWTAPEALREK--KFST 193
Query: 615 KADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQESL 665
K+D++S GI+ +E++ P+ + + V+ +++ ++ P
Sbjct: 194 KSDVWSFGILLWEIYSFGRVPYP-RIPLKDVVPRVEKGYKMDAPDGCPPA---------- 242
Query: 666 LRRLM----SPSPSDRPSATELLQDALPPQMEYELLDNILRM 703
+ +M + RPS +L E L++I
Sbjct: 243 VYEVMKNCWHLDAAMRPSFLQLR----------EQLEHIKTH 274
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 7e-13
Identities = 73/396 (18%), Positives = 130/396 (32%), Gaps = 111/396 (28%)
Query: 367 SGSPNMSLPSSRYLNDFEEL--------QPLGHGGFGHVVLC--KNKLDGRHY---AVKK 413
S +P + Y+ D E+ + LG G FG V K + A+K
Sbjct: 3 SVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKT 62
Query: 414 IRLKDKSLPVNDRI--LREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASS 471
+ + + + +RI L E + + HVVR GV
Sbjct: 63 --VNEAA-SMRERIEFLNEASVMKEFNCHHVVRLL------GV----------------- 96
Query: 472 TFSNRAASSADVTGQENKLESTYLYIQMEYCP--------RTLRQVFESYDHFDKELAWH 523
V+ + + ME R+LR +
Sbjct: 97 -----------VS------QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 139
Query: 524 LF---RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAF 580
+ +I +G+A+++ +HRDL N +KIGDFG+ + + + D
Sbjct: 140 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY----ETDYYR 195
Query: 581 PTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELW----HPFSTA 635
G + V + +PE ++ G +D++S G+V +E+ P+
Sbjct: 196 KGGKGLLPVR---------WMSPESLKDG--VFTTYSDVWSFGVVLWEIATLAEQPYQ-G 243
Query: 636 MERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQDALPPQ 691
+ + VL + + G L + L LM +P RPS E+
Sbjct: 244 LSNEQVLRFVMEGGLLDKP--DNCPDM---LFELMRMCWQYNPKMRPSFLEI-------- 290
Query: 692 MEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLD 727
+ + + S Y + + + E LD
Sbjct: 291 --ISSIKEEME--PGFREVSFYYSEENKLPEPEELD 322
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 9e-13
Identities = 62/322 (19%), Positives = 108/322 (33%), Gaps = 96/322 (29%)
Query: 389 LGHGGFGHVVLCKNKLDGRHY------AVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+G G FG V K L A+K ++ + L E + + H ++
Sbjct: 52 IGAGEFGEV--YKGMLKTSSGKKEVPVAIKTLK-AGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
+R GV ++ + + I EY
Sbjct: 109 IRLE------GV----------------------------ISKYKP------MMIITEYM 128
Query: 503 PRT-----LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
LR+ F + R I G+ ++ +HRDL NI ++
Sbjct: 129 ENGALDKFLRE---KDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLV 185
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKA 616
K+ DFGL++ L + D +A + T G + + +TAPE I K +
Sbjct: 186 CKVSDFGLSRVL---EDDPEATYTTSGGKIPIR---------WTAPEAISYR--KFTSAS 231
Query: 617 DMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQESLLR 667
D++S GIV +E+ P+ + V+ + LP P S +
Sbjct: 232 DVWSFGIVMWEVMTYGERPYW-ELSNHEVMKAINDGFRLPTPMDCP----------SAIY 280
Query: 668 RLM----SPSPSDRPSATELLQ 685
+LM + RP +++
Sbjct: 281 QLMMQCWQQERARRPKFADIVS 302
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 71.4 bits (175), Expect = 1e-12
Identities = 71/394 (18%), Positives = 128/394 (32%), Gaps = 91/394 (23%)
Query: 327 ERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEEL 386
++ + A + Q VS + + +D + Y E +
Sbjct: 333 QKEGERALPSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERI 392
Query: 387 ---QPLGHGGFGHVVLCKNKLDGRHY---AVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
+ +G G FG V A+K + S V ++ L+E T+ + H
Sbjct: 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHP 451
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
H+V+ GV +T ++I ME
Sbjct: 452 HIVKLI------GV----------------------------ITENP-------VWIIME 470
Query: 501 YCPR-TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
C LR + D Q+ LA++ + +HRD+ N+ + + +
Sbjct: 471 LCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV 530
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKAD 617
K+GDFGL+++ ++ + G + + + APE I + +D
Sbjct: 531 KLGDFGLSRY-----MEDSTYYKASKGKLPI---------KWMAPESINFR--RFTSASD 574
Query: 618 MYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM--- 670
++ G+ +E+ PF ++ V+ ++ LP L LM
Sbjct: 575 VWMFGVCMWEILMHGVKPFQ-GVKNNDVIGRIENGERLPMP-----PNCPPTLYSLMTKC 628
Query: 671 -SPSPSDRPSATELLQDALPPQMEYELLDNILRM 703
+ PS RP TEL L IL
Sbjct: 629 WAYDPSRRPRFTEL----------KAQLSTILEE 652
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 2e-12
Identities = 69/365 (18%), Positives = 113/365 (30%), Gaps = 111/365 (30%)
Query: 383 FEELQPLGHGGFGHVVLCKN-KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ- 440
+E + LG G FG VV C + K GRH AVK ++ D+ + E+ L L
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDR---YCEAARSEIQVLEHLNTTD 72
Query: 441 -----HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 495
V+ + WF + G ++
Sbjct: 73 PNSTFRCVQMLE-WF-----EHHG----------------------------------HI 92
Query: 496 YIQMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 553
I E + + F + + QI + + +H + H DL P NI F
Sbjct: 93 CIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFV 152
Query: 554 -------------------ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 594
DIK+ DFG A + +
Sbjct: 153 QSDYTEAYNPKIKRDERTLINPDIKVVDFG------------SATYDDEH---------- 190
Query: 595 VGTY----FYTAPEI--EQGWPKIDEKADMYSLGIVFFELW--HP-FSTAMERQIVLSDL 645
T Y APE+ GW + D++S+G + E + F T ++ +
Sbjct: 191 HSTLVSTRHYRAPEVILALGW---SQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMME 247
Query: 646 KQKGELPPSWVAK------FSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDN 699
+ G LP + K F S + L + L +E+E L +
Sbjct: 248 RILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFD 307
Query: 700 ILRMM 704
+++ M
Sbjct: 308 LIQKM 312
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 2e-12
Identities = 66/320 (20%), Positives = 113/320 (35%), Gaps = 95/320 (29%)
Query: 386 LQPLGHGGFGHVVLCKNKLDGRHY-AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 444
L+ LG G FG V K G++ AVK +K+ S+ ++ +E T+ +L H +V+
Sbjct: 13 LKELGSGQFGVV--KLGKWKGQYDVAVKM--IKEGSMSEDE-FFQEAQTMMKLSHPKLVK 67
Query: 445 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 504
+Y GV + + +YI EY
Sbjct: 68 FY------GV----------------------------CSKEYP------IYIVTEYISN 87
Query: 505 -TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 562
L S+ + + + EG+A + IHRDL N D +K+ D
Sbjct: 88 GCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSD 147
Query: 563 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF---YTAPE-IEQGWPKIDEKADM 618
FG+ +++ D VGT F ++APE K K+D+
Sbjct: 148 FGMTRYVL----DDQY-------------VSSVGTKFPVKWSAPEVFHYF--KYSSKSDV 188
Query: 619 YSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQESLLRRL 669
++ GI+ +E++ P+ V+ + Q L + ++
Sbjct: 189 WAFGILMWEVFSLGKMPY-DLYTNSEVVLKVSQGHRLYRPHLASDT----------IYQI 237
Query: 670 M----SPSPSDRPSATELLQ 685
M P RP+ +LL
Sbjct: 238 MYSCWHELPEKRPTFQQLLS 257
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 2e-12
Identities = 60/321 (18%), Positives = 104/321 (32%), Gaps = 97/321 (30%)
Query: 389 LGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 444
LG G FG V + R A+K ++ + + ++RE + +L + ++VR
Sbjct: 18 LGCGNFGSV--RQGVYRMRKKQIDVAIKVLK-QGTEKADTEEMMREAQIMHQLDNPYIVR 74
Query: 445 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 504
GV + L + ME
Sbjct: 75 LI------GV----------------------------CQAEA-------LMLVMEMAGG 93
Query: 505 -----TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
L + L Q+ G+ ++ + +HRDL N+ R+ K
Sbjct: 94 GPLHKFLV---GKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAK 150
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGG-VSVDGTGQVGTYFYTAPE-IEQGWPKIDEKAD 617
I DFGL+K L D+ + + G + + APE I K ++D
Sbjct: 151 ISDFGLSKALG----ADDSYYTARSAGKWPL---------KWYAPECINFR--KFSSRSD 195
Query: 618 MYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQESLLRR 668
++S G+ +E P+ M+ V++ ++Q + P L
Sbjct: 196 VWSYGVTMWEALSYGQKPYK-KMKGPEVMAFIEQGKRMECPPECP----------PELYA 244
Query: 669 LM----SPSPSDRPSATELLQ 685
LM DRP + Q
Sbjct: 245 LMSDCWIYKWEDRPDFLTVEQ 265
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 70.3 bits (172), Expect = 2e-12
Identities = 78/382 (20%), Positives = 130/382 (34%), Gaps = 106/382 (27%)
Query: 348 FHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEEL---QPLGHGGFGHVVLCKNKL 404
++ K + S L + E L LG G FG V
Sbjct: 231 YYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEV--WMGTW 288
Query: 405 DGRHY-AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 463
+G A+K LK ++ L+E + +L+H+ +V+ Y V
Sbjct: 289 NGTTRVAIKT--LKPGTMSPEA-FLQEAQVMKKLRHEKLVQLY------AV--------- 330
Query: 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT-----LRQVFESYDHFDK 518
V+ + +YI EY + L+ Y +
Sbjct: 331 -------------------VSEE-------PIYIVTEYMSKGSLLDFLKGETGKYLRLPQ 364
Query: 519 ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQ--LDQ 576
+ QI G+A++ +HRDL NI K+ DFGLA+ ++ + Q
Sbjct: 365 LVDM--AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 422
Query: 577 DAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELW----HP 631
A FP +TAPE G + K+D++S GI+ EL P
Sbjct: 423 GAKFP----------------IKWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVP 464
Query: 632 FSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQESLLRRLM----SPSPSDRPSATE 682
+ M + VL +++ +P P + LM P +RP+
Sbjct: 465 Y-PGMVNREVLDQVERGYRMPCPPECPESLHD----------LMCQCWRKEPEERPTFEY 513
Query: 683 L---LQDALP-PQMEYELLDNI 700
L L+D + +Y+ +N+
Sbjct: 514 LQAFLEDYFTSTEPQYQPGENL 535
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 2e-12
Identities = 66/352 (18%), Positives = 108/352 (30%), Gaps = 110/352 (31%)
Query: 386 LQPLGHGGFGHVVLCK-NKLDGRHY----AVKKIRLKDKSLPVNDRI--LREVATLSRL- 437
+ LG G FG VV L AVK LK + + +R + E+ LS L
Sbjct: 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKM--LKPSA-HLTEREALMSELKVLSYLG 84
Query: 438 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
H ++V G T +
Sbjct: 85 NHMNIVNLL------GA----------------------------CTIGG------PTLV 104
Query: 498 QMEYCP--------RTLRQVFESYDHFDKELAWHLF-----------RQIVEGLAHIHGQ 538
EYC R R F + Q+ +G+A + +
Sbjct: 105 ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK 164
Query: 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLE---QLDQDAAFPTDTGGVSVDGTGQV 595
IHRDL NI KI DFGLA+ +K + + +A P
Sbjct: 165 NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP-------------- 210
Query: 596 GTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGE 650
+ APE I ++D++S GI +EL+ P+ +K+
Sbjct: 211 --VKWMAPESIFNC--VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR 266
Query: 651 LP-PSWVAKFSEQESLLRRLM----SPSPSDRPSATEL---LQDALPPQMEY 694
+ P + + E + +M P RP+ ++ ++ + +
Sbjct: 267 MLSP----EHAPAE--MYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNH 312
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 3e-12
Identities = 51/266 (19%), Positives = 93/266 (34%), Gaps = 68/266 (25%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ-- 440
F ++ +G G FG V+LC++ + ++YAVK +R K E L ++Q+
Sbjct: 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYT---RSAKIEADILKKIQNDDI 93
Query: 441 ---HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
++V+Y+ F + ++ +
Sbjct: 94 NNNNIVKYHG-KF-----MYYD----------------------------------HMCL 113
Query: 498 QMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 555
E +L ++ ++ F E +I++ L ++ + H DL P NI
Sbjct: 114 IFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILL--- 170
Query: 556 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTG------GVSVDGTGQVGTY----FYTAPEI 605
+D + + TG G + + G+ Y APE+
Sbjct: 171 DDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEV 230
Query: 606 --EQGWPKIDEKADMYSLGIVFFELW 629
GW D +DM+S G V EL+
Sbjct: 231 ILNLGW---DVSSDMWSFGCVLAELY 253
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 3e-12
Identities = 66/351 (18%), Positives = 120/351 (34%), Gaps = 105/351 (29%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
D LG G +G V K AVK LK+ ++ V + L+E A + ++H
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEVEE-FLKEAAVMKEIKHP 69
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
++V+ GV T + YI E
Sbjct: 70 NLVQLL------GV----------------------------CTREP------PFYIITE 89
Query: 501 YCPRT-----LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 555
+ LR+ + + ++ QI + ++ + IHRDL N
Sbjct: 90 FMTYGNLLDYLRE--CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 147
Query: 556 NDIKIGDFGLAKFLKLEQ--LDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKI 612
+ +K+ DFGL++ + + A FP +TAPE + K
Sbjct: 148 HLVKVADFGLSRLMTGDTYTAHAGAKFP----------------IKWTAPESLAYN--KF 189
Query: 613 DEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQE 663
K+D+++ G++ +E+ P+ ++ V L++ + P
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYP-GIDLSQVYELLEKDYRMERPEGCP---------- 238
Query: 664 SLLRRLM----SPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDT 710
+ LM +PSDRPS E+ Q + + + S++
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIHQA----------FETMFQESSISDEV 279
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 70.0 bits (171), Expect = 3e-12
Identities = 73/472 (15%), Positives = 138/472 (29%), Gaps = 103/472 (21%)
Query: 260 NNDGGDTEIDRLESFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLTDALPQIATEL 319
+ G I E F +L Q ++ D ++ L S+ S
Sbjct: 215 QDKAGKYCIP--EGTKFDTLWQLVEYLKLKADGLIYCLKEACPNSSASNASGAAAPTLPA 272
Query: 320 YNLGIFSERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRY 379
+ + + R + K + P +
Sbjct: 273 HPSTLTHPQRRIDTLNSDGYTPEPARITSPDKPRPMPMDT-SVFESPFSDPEELKDKKLF 331
Query: 380 LNDFEEL---QPLGHGGFGHVVLCKNKLDGRHY--AVKKIRLKDKSLPVNDRILREVATL 434
L L LG G FG V ++ + A+K ++ + + ++RE +
Sbjct: 332 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLK-QGTEKADTEEMMREAQIM 390
Query: 435 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 494
+L + ++VR GV +
Sbjct: 391 HQLDNPYIVRLI------GV----------------------------CQAEA------- 409
Query: 495 LYIQMEYCPR-TLRQVF-ESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
L + ME L + + L Q+ G+ ++ + +HR+L N+
Sbjct: 410 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLL 469
Query: 553 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG-VSVDGTGQVGTYFYTAPE-IEQGWP 610
R+ KI DFGL+K L D+ + + G + + APE I
Sbjct: 470 VNRHYAKISDFGLSKALG----ADDSYYTARSAGKWPL---------KWYAPECINFR-- 514
Query: 611 KIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSE 661
K ++D++S G+ +E P+ M+ V++ ++Q + P
Sbjct: 515 KFSSRSDVWSYGVTMWEALSYGQKPYK-KMKGPEVMAFIEQGKRMECPPECP-------- 565
Query: 662 QESLLRRLM----SPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSED 709
L LM DRP + + + + S +
Sbjct: 566 --PELYALMSDCWIYKWEDRPDFLTV----------EQRMRACYYSLASKVE 605
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 3e-12
Identities = 52/255 (20%), Positives = 89/255 (34%), Gaps = 73/255 (28%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
+ + LQ +G G FG V G AVK +K+ + L E + +++L+H
Sbjct: 193 KELKLLQTIGKGEFGDV--MLGDYRGNKVAVK--CIKNDATA--QAFLAEASVMTQLRHS 246
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
++V+ GV + ++ LYI E
Sbjct: 247 NLVQLL------GV----------------------------IVEEK-----GGLYIVTE 267
Query: 501 YCPRT-----LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 555
Y + LR + + E + ++ G +HRDL N+
Sbjct: 268 YMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSED 325
Query: 556 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDE 614
N K+ DFGL K + P +TAPE + + K
Sbjct: 326 NVAKVSDFGLTK--EASSTQDTGKLP----------------VKWTAPEALREK--KFST 365
Query: 615 KADMYSLGIVFFELW 629
K+D++S GI+ +E++
Sbjct: 366 KSDVWSFGILLWEIY 380
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 67.2 bits (165), Expect = 4e-12
Identities = 58/338 (17%), Positives = 116/338 (34%), Gaps = 105/338 (31%)
Query: 386 LQPLGHGGFGHVVLCKNKLDGRHY-AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 444
L+ LG G FG V K G++ A+K +K+ S+ ++ + E + L H+ +V+
Sbjct: 29 LKELGTGQFGVV--KYGKWRGQYDVAIKM--IKEGSMSEDE-FIEEAKVMMNLSHEKLVQ 83
Query: 445 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 504
Y GV T Q ++I EY
Sbjct: 84 LY------GV----------------------------CTKQR------PIFIITEYMAN 103
Query: 505 -TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 562
L H F + + + + E + ++ + +HRDL N + + +K+ D
Sbjct: 104 GCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSD 163
Query: 563 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF---YTAPE-IEQGWPKIDEKADM 618
FGL++++ ++ T VG+ F ++ PE + K K+D+
Sbjct: 164 FGLSRYVLDDEY-----------------TSSVGSKFPVRWSPPEVLMYS--KFSSKSDI 204
Query: 619 YSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQESLLRRL 669
++ G++ +E++ P+ + Q L + +
Sbjct: 205 WAFGVLMWEIYSLGKMPYE-RFTNSETAEHIAQGLRLYRPHLAS----------EKVYTI 253
Query: 670 M----SPSPSDRPSATELLQDALPPQMEYELLDNILRM 703
M +RP+ LL + +++
Sbjct: 254 MYSCWHEKADERPTFKILL----------SNILDVMDE 281
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 4e-12
Identities = 68/349 (19%), Positives = 122/349 (34%), Gaps = 106/349 (30%)
Query: 386 LQPLGHGGFGHVVLCK----NKLDGRHY-AVKKIRLKDKSLPVNDRI--LREVATLSRL- 437
+ LG G FG VV K D AVK LK + +++ + E+ +S L
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKM--LKSTAHA-DEKEALMSELKIMSHLG 107
Query: 438 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
QH+++V G T + +
Sbjct: 108 QHENIVNLL------GA----------------------------CTHGG------PVLV 127
Query: 498 QMEYCP--------RTLRQVFESYDHFDKELAWHLFR-------QIVEGLAHIHGQGIIH 542
EYC R +V E+ F + R Q+ +G+A + + IH
Sbjct: 128 ITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIH 187
Query: 543 RDLTPNNIFFDARNDIKIGDFGLAKFLKLE---QLDQDAAFPTDTGGVSVDGTGQVGTYF 599
RD+ N+ + KIGDFGLA+ + + + +A P V
Sbjct: 188 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP-----VK----------- 231
Query: 600 YTAPE-IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-P 653
+ APE I ++D++S GI+ +E++ +P+ + +K ++ P
Sbjct: 232 WMAPESIFDC--VYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQP 289
Query: 654 SWVAKFSEQESLLRRLM----SPSPSDRPSATEL---LQDALPPQMEYE 695
F+ + + +M + P+ RP+ ++ LQ+
Sbjct: 290 ----AFAPKN--IYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRRER 332
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 66.8 bits (164), Expect = 5e-12
Identities = 59/320 (18%), Positives = 109/320 (34%), Gaps = 95/320 (29%)
Query: 386 LQPLGHGGFGHVVLCKNKLDGRHY-AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 444
+Q +G G FG V + A+K +++ ++ D + E + +L H +V+
Sbjct: 13 VQEIGSGQFGLV--HLGYWLNKDKVAIKT--IREGAMSEED-FIEEAEVMMKLSHPKLVQ 67
Query: 445 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 504
Y GV Q + + E+
Sbjct: 68 LY------GV----------------------------CLEQA------PICLVTEFMEH 87
Query: 505 -TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 562
L + F E + + EG+A++ +IHRDL N IK+ D
Sbjct: 88 GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSD 147
Query: 563 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF---YTAPE-IEQGWPKIDEKADM 618
FG+ +F+ +Q T GT F + +PE + K+D+
Sbjct: 148 FGMTRFVLDDQY-----------------TSSTGTKFPVKWASPEVFSFS--RYSSKSDV 188
Query: 619 YSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQESLLRRL 669
+S G++ +E++ P+ V+ D+ L + + ++
Sbjct: 189 WSFGVLMWEVFSEGKIPYE-NRSNSEVVEDISTGFRLYKPRLASTH----------VYQI 237
Query: 670 M----SPSPSDRPSATELLQ 685
M P DRP+ + LL+
Sbjct: 238 MNHCWRERPEDRPAFSRLLR 257
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 5e-12
Identities = 69/368 (18%), Positives = 119/368 (32%), Gaps = 115/368 (31%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHY-AVKKIRLKDKSLPVNDRILREVATLSRLQHQ- 440
+E + LG G FG VV C + G+ A+K IR K + E+ L +++ +
Sbjct: 21 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGK---YREAARLEINVLKKIKEKD 77
Query: 441 -----HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 495
V WF +F G ++
Sbjct: 78 KENKFLCVLMSD-WF-----NFHG----------------------------------HM 97
Query: 496 YIQMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF- 552
I E + + + + + H+ Q+ L +H + H DL P NI F
Sbjct: 98 CIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFV 157
Query: 553 ------------------DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 594
I++ DFG A F +
Sbjct: 158 NSEFETLYNEHKSCEEKSVKNTSIRVADFG------------SATFDHEH---------- 195
Query: 595 VGTY----FYTAPEI--EQGWPKIDEKADMYSLGIVFFELW--HP-FSTAMERQIVLSDL 645
T Y PE+ E GW + D++S+G + FE + F T R+ ++
Sbjct: 196 HTTIVATRHYRPPEVILELGW---AQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMME 252
Query: 646 KQKGELPPSWV-----AKFSEQESLLRRLMSPS-----PSDRPSATELLQDALPPQMEYE 695
K G +P + K+ + L+ S + +P + +LQD+L ++
Sbjct: 253 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFD 312
Query: 696 LLDNILRM 703
L+ +L
Sbjct: 313 LMRRMLEF 320
|
| >1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3 Length = 137 | Back alignment and structure |
|---|
Score = 63.5 bits (154), Expect = 6e-12
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 23 HSSSTVDDNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAR 82
+ + + E+ C P YP P++ + KGL+ + L L++ A
Sbjct: 52 YPQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKNAKGLSNESVNLLKSHLEELAKKQC- 110
Query: 83 EGRVMIFNLVEAAQEFLSE 101
G VMIF L Q FLSE
Sbjct: 111 -GEVMIFELAHHVQSFLSE 128
|
| >2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 128 | Back alignment and structure |
|---|
Score = 63.1 bits (153), Expect = 6e-12
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 24 SSSTVDDNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNARE 83
+S +++E + + YP + P +I ++ L +D ++L LL QA N
Sbjct: 45 TSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFSQENLEDNDVSDILKLLALQAEENL-- 102
Query: 84 GRVMIFNLVEAAQEFLSEIV 103
G VMIF LV A QE L+EIV
Sbjct: 103 GMVMIFTLVTAVQEKLNEIV 122
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 7e-12
Identities = 64/340 (18%), Positives = 112/340 (32%), Gaps = 104/340 (30%)
Query: 386 LQPLGHGGFGHVVLCKNKLDGRHY---AVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+ +G G FG V A+K + S V ++ L+E T+ + H H+
Sbjct: 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHI 78
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
V+ GV +T ++I ME C
Sbjct: 79 VKLI------GV----------------------------ITENP-------VWIIMELC 97
Query: 503 PR-----TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
L+ D Q+ LA++ + +HRD+ N+ + +
Sbjct: 98 TLGELRSFLQ---VRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC 154
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKA 616
+K+GDFGL+++ ++ + G + + + APE I + +
Sbjct: 155 VKLGDFGLSRY-----MEDSTYYKASKGKLPI---------KWMAPESINFR--RFTSAS 198
Query: 617 DMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQESLLR 667
D++ G+ +E+ PF ++ V+ ++ LP P L
Sbjct: 199 DVWMFGVCMWEILMHGVKPFQ-GVKNNDVIGRIENGERLPMPPNCP----------PTLY 247
Query: 668 RLM----SPSPSDRPSATELLQDALPPQMEYELLDNILRM 703
LM + PS RP TEL L IL
Sbjct: 248 SLMTKCWAYDPSRRPRFTEL----------KAQLSTILEE 277
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 8e-12
Identities = 63/368 (17%), Positives = 117/368 (31%), Gaps = 95/368 (25%)
Query: 387 QPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLP-VNDRILREVATLSRLQHQH 441
+ LG G FG V +G +K ++DKS + + + L H H
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKV--IEDKSGRQSFQAVTDHMLAIGSLDHAH 76
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
+VR G+ G L + +Y
Sbjct: 77 IVRLL------GL----------------------------CPGSS-------LQLVTQY 95
Query: 502 CPR-TLRQ-VFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
P +L V + +L + QI +G+ ++ G++HR+L N+ + + ++
Sbjct: 96 LPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQ 155
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADM 618
+ DFG+A L D + + A E I G K ++D+
Sbjct: 156 VADFGVADLLP----PDDKQLLYSEAKTPIK---------WMALESIHFG--KYTHQSDV 200
Query: 619 YSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQESLLRRL 669
+S G+ +EL P++ + V L++ L + +
Sbjct: 201 WSYGVTVWELMTFGAEPYA-GLRLAEVPDLLEKGERLAQPQICTID----------VYMV 249
Query: 670 M----SPSPSDRPSATEL---LQDALPPQMEYELLDNILRM--MHSSEDTSIYDKVVSSI 720
M + RP+ EL Y ++ E + +K + +
Sbjct: 250 MVKCWMIDENIRPTFKELANEFTRMARDPPRYLVIKRESGPGIAPGPEPHGLTNKKLEEV 309
Query: 721 FDEETLDM 728
E LD+
Sbjct: 310 ELEPELDL 317
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 9e-12
Identities = 68/343 (19%), Positives = 120/343 (34%), Gaps = 110/343 (32%)
Query: 386 LQPLGHGGFGHV---VLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+ LG G FG V V +K + + AVK + KD +L ++ + E + L H H+
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCK-KDCTLDNKEKFMSEAVIMKNLDHPHI 75
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
V+ G+ + + +I ME
Sbjct: 76 VKLI------GI----------------------------IEEEP-------TWIIMELY 94
Query: 503 PR-----TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
P L + + QI + +A++ +HRD+ NI +
Sbjct: 95 PYGELGHYLE---RNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPEC 151
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF---YTAPE-IEQGWPKID 613
+K+GDFGL+++++ D+D T + +PE I +
Sbjct: 152 VKLGDFGLSRYIE----DEDY-------------YKASVTRLPIKWMSPESINFR--RFT 192
Query: 614 EKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQES 664
+D++ + +E+ PF +E + V+ L++ LP P
Sbjct: 193 TASDVWMFAVCMWEILSFGKQPFF-WLENKDVIGVLEKGDRLPKPDLCP----------P 241
Query: 665 LLRRLM----SPSPSDRPSATELLQDALPPQMEYELLDNILRM 703
+L LM PSDRP TEL+ L ++ +M
Sbjct: 242 VLYTLMTRCWDYDPSDRPRFTELV----------CSLSDVYQM 274
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 1e-11
Identities = 66/341 (19%), Positives = 108/341 (31%), Gaps = 113/341 (33%)
Query: 386 LQPLGHGGFGHVVLC--KNKLDGRHY---AVKKIRLKDKSLPVNDRI--LREVATLSRLQ 438
++ LG FG V G A+K LKDK+ R E +RLQ
Sbjct: 14 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKT--LKDKA-EGPLREEFRHEAMLRARLQ 70
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
H +VV GV VT + L +
Sbjct: 71 HPNVVCLL------GV----------------------------VTKDQP------LSMI 90
Query: 499 MEYCP--------RTLRQVFESYDHFDKELAWHLF---------RQIVEGLAHIHGQGII 541
YC + D QI G+ ++ ++
Sbjct: 91 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVV 150
Query: 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLE---QLDQDAAFPTDTGGVSVDGTGQVGTY 598
H+DL N+ + ++KI D GL + + +L ++ P
Sbjct: 151 HKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPI---------------- 194
Query: 599 FYTAPE-IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP- 652
+ APE I G K +D++S G+V +E++ P+ Q V+ ++ + LP
Sbjct: 195 RWMAPEAIMYG--KFSIDSDIWSYGVVLWEVFSYGLQPYC-GYSNQDVVEMIRNRQVLPC 251
Query: 653 ----PSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQ 685
P+W + LM + PS RP ++
Sbjct: 252 PDDCPAW----------VYALMIECWNEFPSRRPRFKDIHS 282
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 2e-11
Identities = 67/339 (19%), Positives = 106/339 (31%), Gaps = 109/339 (32%)
Query: 386 LQPLGHGGFGHVVLC--KNKLDGRHY---AVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
LG G FG V L N L + AVK LK+ S RE L+ LQHQ
Sbjct: 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKA--LKEASESARQDFQREAELLTMLQHQ 103
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
H+VR++ GV T E L + E
Sbjct: 104 HIVRFF------GV----------------------------CT------EGRPLLMVFE 123
Query: 501 YCP--------RTLRQVFESYDHFDKELAWHLF--------RQIVEGLAHIHGQGIIHRD 544
Y R+ + + L Q+ G+ ++ G +HRD
Sbjct: 124 YMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRD 183
Query: 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQ---LDQDAAFPTDTGGVSVDGTGQVGTYFYT 601
L N +KIGDFG+++ + + P + +
Sbjct: 184 LATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP-----IR-----------WM 227
Query: 602 APE-IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP---- 652
PE I K ++D++S G+V +E++ P+ + + + Q EL
Sbjct: 228 PPESILYR--KFTTESDVWSFGVVLWEIFTYGKQPWY-QLSNTEAIDCITQGRELERPRA 284
Query: 653 -PSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQD 686
P + +M P R S ++
Sbjct: 285 CPPE----------VYAIMRGCWQREPQQRHSIKDVHAR 313
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 2e-11
Identities = 58/372 (15%), Positives = 104/372 (27%), Gaps = 114/372 (30%)
Query: 369 SPNMSLPSSRYLNDFEEL-----QPLGHGGFGHVVLCKNKLDGRHY---AVKKIRLKDKS 420
+P + + L + +G G FG V + AVK L +
Sbjct: 8 NPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS--LNRIT 65
Query: 421 LPVNDRI--LREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAA 478
+ + L E + H +V+ G+
Sbjct: 66 -DIGEVSQFLTEGIIMKDFSHPNVLSLL------GI------------------------ 94
Query: 479 SSADVTGQENKLESTYLYIQMEYCP--------RTLRQVFESYDHFDKELAWHLFRQIVE 530
E + + Y R D Q+ +
Sbjct: 95 ----CLRSEGSP-----LVVLPYMKHGDLRNFIRNETHNPTVKDLI------GFGLQVAK 139
Query: 531 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 590
G+ ++ + +HRDL N D + +K+ DFGLA+ + + + + V
Sbjct: 140 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVK 197
Query: 591 GTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDL 645
+ A E ++ K K+D++S G++ +EL P+ + + L
Sbjct: 198 ---------WMALESLQTQ--KFTTKSDVWSFGVLLWELMTRGAPPYP-DVNTFDITVYL 245
Query: 646 KQKGELP-----PSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQDALPPQMEYEL 696
Q L P L +M P RPS +EL+
Sbjct: 246 LQGRRLLQPEYCP----------DPLYEVMLKCWHPKAEMRPSFSELV----------SR 285
Query: 697 LDNILRMMHSSE 708
+ I
Sbjct: 286 ISAIFSTFIGEH 297
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 65.3 bits (160), Expect = 2e-11
Identities = 79/323 (24%), Positives = 112/323 (34%), Gaps = 101/323 (31%)
Query: 386 LQPLGHGGFGHVVLCKNKLDGRHY-AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 444
++ LG G FG V +G AVK LK S+ + L E + +LQHQ +VR
Sbjct: 18 VERLGAGQFGEV--WMGYYNGHTKVAVKS--LKQGSMSPDA-FLAEANLMKQLQHQRLVR 72
Query: 445 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 504
Y V VT + +YI EY
Sbjct: 73 LY------AV----------------------------VTQEP-------IYIITEYMEN 91
Query: 505 T-----LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
L+ S + QI EG+A I + IHRDL NI K
Sbjct: 92 GSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCK 149
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF---YTAPE-IEQGWPKIDEK 615
I DFGLA+ ++ + T + G F +TAPE I G K
Sbjct: 150 IADFGLARLIEDN-----------------EYTAREGAKFPIKWTAPEAINYG--TFTIK 190
Query: 616 ADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQESLL 666
+D++S GI+ E+ P+ M V+ +L++ + P L
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYP-GMTNPEVIQNLERGYRMVRPDNCP----------EEL 239
Query: 667 RRLM----SPSPSDRPSATELLQ 685
+LM P DRP+ L
Sbjct: 240 YQLMRLCWKERPEDRPTFDYLRS 262
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 3e-11
Identities = 66/367 (17%), Positives = 117/367 (31%), Gaps = 108/367 (29%)
Query: 387 QPLGHGGFGHVVLCKNKLDGRHY--AVKKIRLKDKSLPVNDRI--LREVATLSRL-QHQH 441
+G G FG V+ + K DG A+K R+K+ + +D E+ L +L H +
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIK--RMKEYA-SKDDHRDFAGELEVLCKLGHHPN 87
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
++ G + YLY+ +EY
Sbjct: 88 IINLL------GA----------------------------CEHRG------YLYLAIEY 107
Query: 502 CP--------RTLRQVFESYDHFDKELAWHLF---------RQIVEGLAHIHGQGIIHRD 544
P R R + + G+ ++ + IHRD
Sbjct: 108 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRD 167
Query: 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 604
L NI KI DFGL++ Q+ G + V + A E
Sbjct: 168 LAARNILVGENYVAKIADFGLSR-------GQEVYVKKTMGRLPVR---------WMAIE 211
Query: 605 -IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELPPSWVAKF 659
+ +D++S G++ +E+ P+ M + L Q L
Sbjct: 212 SLNYS--VYTTNSDVWSYGVLLWEIVSLGGTPYCG-MTCAELYEKLPQGYRLEKP--LNC 266
Query: 660 SEQESLLRRLM----SPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIYDK 715
++ + LM P +RPS ++ L+ +L + +T++Y+K
Sbjct: 267 DDE---VYDLMRQCWREKPYERPSFAQI----------LVSLNRMLEERKTYVNTTLYEK 313
Query: 716 VVSSIFD 722
+ D
Sbjct: 314 FTYAGID 320
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 65.9 bits (161), Expect = 4e-11
Identities = 61/254 (24%), Positives = 88/254 (34%), Gaps = 77/254 (30%)
Query: 386 LQPLGHGGFGHVVLCKNKLDGRHY-AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 444
+ LG G FG V + AVK +K S+ V L E + LQH +V+
Sbjct: 193 EKKLGAGQFGEV--WMATYNKHTKVAVKT--MKPGSMSVEA-FLAEANVMKTLQHDKLVK 247
Query: 445 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 504
+ V VT + +YI E+ +
Sbjct: 248 LH------AV----------------------------VTKEP-------IYIITEFMAK 266
Query: 505 T-----LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
L+ + QI EG+A I + IHRDL NI A K
Sbjct: 267 GSLLDFLKS--DEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCK 324
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF---YTAPE-IEQGWPKIDEK 615
I DFGLA+ ++ + T + G F +TAPE I G K
Sbjct: 325 IADFGLARVIEDN-----------------EYTAREGAKFPIKWTAPEAINFG--SFTIK 365
Query: 616 ADMYSLGIVFFELW 629
+D++S GI+ E+
Sbjct: 366 SDVWSFGILLMEIV 379
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 4e-11
Identities = 34/195 (17%), Positives = 57/195 (29%), Gaps = 51/195 (26%)
Query: 386 LQPLGHGGFGHVVLCK-NKLDGR--HYAVKKIRLKDKSLPVNDRI--LREVATLSRLQHQ 440
+ LG G FG V+ + DG AVK +K + + L E A + H
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKT--MKLDNSSQREIEEFLSEAACMKDFSHP 96
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
+V+R GV + + + +
Sbjct: 97 NVIRLL------GV----------------------------CI-EMSSQGIPKPMVILP 121
Query: 501 YCP--------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
+ R + L I G+ ++ + +HRDL N
Sbjct: 122 FMKYGDLHTYLLYSRLETGPKHIPLQTLL-KFMVDIALGMEYLSNRNFLHRDLAARNCML 180
Query: 553 DARNDIKIGDFGLAK 567
+ + DFGL+K
Sbjct: 181 RDDMTVCVADFGLSK 195
|
| >2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A Length = 128 | Back alignment and structure |
|---|
Score = 60.3 bits (146), Expect = 5e-11
Identities = 17/79 (21%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 24 SSSTVDDNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNARE 83
+++ D++ + + YP++ P++ I +GL+ +L +L A +
Sbjct: 49 ATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNPRGLSDEQIHTILQVLGHVAKAGL-- 106
Query: 84 GRVMIFNLVEAAQEFLSEI 102
G M++ L+E +E LS
Sbjct: 107 GTAMLYELIEKGKEILSGP 125
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 6e-11
Identities = 64/361 (17%), Positives = 121/361 (33%), Gaps = 115/361 (31%)
Query: 386 LQPLGHGGFGHVVLCK-NKLDGRHY----AVKKIRLKDKSLPVNDRI--LREVATLSRL- 437
+ LG G FG V+ + AVK LK+K+ ++R + E+ +++L
Sbjct: 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKM--LKEKA-DSSEREALMSELKMMTQLG 106
Query: 438 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
H+++V G T +Y+
Sbjct: 107 SHENIVNLL------GA----------------------------CTLSGP------IYL 126
Query: 498 QMEYCP--------RTLRQVFESYDHFDKELAWHLF----------------RQIVEGLA 533
EYC R+ R+ F + + Q+ +G+
Sbjct: 127 IFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGME 186
Query: 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLE---QLDQDAAFPTDTGGVSVD 590
+ + +HRDL N+ +KI DFGLA+ + + + +A P V
Sbjct: 187 FLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLP-----VK-- 239
Query: 591 GTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDL 645
+ APE + +G K+D++S GI+ +E++ +P+ +
Sbjct: 240 ---------WMAPESLFEG--IYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLI 288
Query: 646 KQKGELP-PSWVAKFSEQESLLRRLM----SPSPSDRPSATEL---LQDALPPQMEYELL 697
+ ++ P ++ +E + +M + RPS L L L E
Sbjct: 289 QNGFKMDQP----FYATEE--IYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEAMYQ 342
Query: 698 D 698
+
Sbjct: 343 N 343
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 6e-11
Identities = 72/389 (18%), Positives = 125/389 (32%), Gaps = 122/389 (31%)
Query: 386 LQPLGHGGFGHVVLCK-NKLDGRHY------AVKKIRLKDKSLPVNDRI--LREVATLSR 436
+PLG G FG VVL + LD AVK LK + D + E+ +
Sbjct: 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM--LKSDATE-KDLSDLISEMEMMKM 130
Query: 437 L-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 495
+ +H++++ G T L
Sbjct: 131 IGKHKNIINLL------GA----------------------------CTQDG------PL 150
Query: 496 YIQMEYCP--------RTLRQVFESYDH-FDKELAWHLF--------RQIVEGLAHIHGQ 538
Y+ +EY + R Y + L Q+ G+ ++ +
Sbjct: 151 YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK 210
Query: 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLE---QLDQDAAFPTDTGGVSVDGTGQV 595
IHRDL N+ N +KI DFGLA+ + + + P V
Sbjct: 211 KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP-----VK------- 258
Query: 596 GTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELWHPFSTA------MERQIVLSDLKQK 648
+ APE + ++D++S G++ LW F+ + + + LK+
Sbjct: 259 ----WMAPEALFDR--IYTHQSDVWSFGVL---LWEIFTLGGSPYPGVPVEELFKLLKEG 309
Query: 649 GELP-PSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQDALPPQMEYELLDNILRM 703
+ PS + + L +M PS RP+ +L E LD I+ +
Sbjct: 310 HRMDKPSNC---TNE---LYMMMRDCWHAVPSQRPTFKQL----------VEDLDRIVAL 353
Query: 704 MHSSEDTSIYDKVVSSIFDEETLDMKHHA 732
+ E + T ++ +
Sbjct: 354 TSNQEMGYYHHHHHHDYDIPTTENLYFNG 382
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 64.5 bits (157), Expect = 8e-11
Identities = 53/398 (13%), Positives = 104/398 (26%), Gaps = 144/398 (36%)
Query: 386 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ------- 438
++ LG G F V L + + A+K ++ + + L E+ L ++
Sbjct: 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHY---TETALDEIRLLKSVRNSDPNDP 98
Query: 439 -HQHVVRYYQAWFE-TG--------VADFDGDSMWGSGTLASSTFSNRAASSADVTGQEN 488
+ VV+ F+ +G V + G +
Sbjct: 99 NREMVVQLL-DDFKISGVNGTHICMVFEVLGHHLL------------------------- 132
Query: 489 KLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTP 547
Y + +Q+++GL ++H + IIH D+ P
Sbjct: 133 ----------------KWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKP 175
Query: 548 NNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG---------------- 591
NI A + + T +
Sbjct: 176 ENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKV 235
Query: 592 ---------------TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFS 633
T + T Y + E+ G + AD++S + FEL + F
Sbjct: 236 KIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFE 294
Query: 634 TAMERQIVLSD--LKQK----GELPPSWVAK----------------------------- 658
+ + + G++P +
Sbjct: 295 PHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVL 354
Query: 659 -----FSEQE-----SLLRRLMSPSPSDRPSATELLQD 686
+S++E L ++ P R +A E L+
Sbjct: 355 VEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 8e-11
Identities = 59/383 (15%), Positives = 107/383 (27%), Gaps = 114/383 (29%)
Query: 362 KPSVDSGSPNMSLPSSRYLNDFEEL-----QPLGHGGFGHVVLCKNKLDGRHY---AVKK 413
+ + +P + + L + +G G FG V + AVK
Sbjct: 65 HIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS 124
Query: 414 IRLKDKSLPVNDRI--LREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASS 471
L + + + L E + H +V+ G+
Sbjct: 125 --LNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLL------GI----------------- 158
Query: 472 TFSNRAASSADVTGQENKLESTYLYIQMEYCP--------RTLRQVFESYDHFDKELAWH 523
E + + Y R D
Sbjct: 159 -----------CLRSEGSP-----LVVLPYMKHGDLRNFIRNETHNPTVKDLI------G 196
Query: 524 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTD 583
Q+ +G+ + + +HRDL N D + +K+ DFGLA+ + + D+
Sbjct: 197 FGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD--MYDKEFDSVHNKT 254
Query: 584 TGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMER 638
+ V + A E ++ K K+D++S G++ +EL P+ +
Sbjct: 255 GAKLPVK---------WMALESLQTQ--KFTTKSDVWSFGVLLWELMTRGAPPYP-DVNT 302
Query: 639 QIVLSDLKQKGELP-----PSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQDALP 689
+ L Q L P L +M P RPS +EL+
Sbjct: 303 FDITVYLLQGRRLLQPEYCP----------DPLYEVMLKCWHPKAEMRPSFSELVSR--- 349
Query: 690 PQMEYELLDNILRMMHSSEDTSI 712
+ I +
Sbjct: 350 -------ISAIFSTFIGEHYVHV 365
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 9e-11
Identities = 51/262 (19%), Positives = 79/262 (30%), Gaps = 76/262 (29%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK--KIRLKDKSLPVNDRILREVATLSRLQ 438
N + + +G G FG + L + G A+K ++ K L E +Q
Sbjct: 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLH------IESKIYKMMQ 62
Query: 439 H-QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
+ W G E Y +
Sbjct: 63 GGVGIPTIR--WC----------------------------------GAEGD----YNVM 82
Query: 498 QMEYCPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF---D 553
ME +L +F F + L Q++ + +IH + IHRD+ P+N
Sbjct: 83 VMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGK 142
Query: 554 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV---DGTGQVGTYFYTAP----EIE 606
N + I DFGLAK + + + GT Y + IE
Sbjct: 143 KGNLVYIIDFGLAK-----------KYRDARTHQHIPYRENKNLTGTARYASINTHLGIE 191
Query: 607 QGWPKIDEKADMYSLGIVFFEL 628
Q + D+ SLG V
Sbjct: 192 QSR-----RDDLESLGYVLMYF 208
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 1e-10
Identities = 72/360 (20%), Positives = 123/360 (34%), Gaps = 112/360 (31%)
Query: 386 LQPLGHGGFGHVVLCK-NKLDGRHY----AVKKIRLKDK-SLPVNDRILREVATLSRL-Q 438
+PLG G FG V+ +D AVK LK+ + + ++ E+ L +
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGH 89
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
H +VV G T L +
Sbjct: 90 HLNVVNLL------GA----------------------------CTKPGGPL-----MVI 110
Query: 499 MEYCP--------RTLRQVFESYDHFDKELAWHLF---------RQIVEGLAHIHGQGII 541
+E+C R+ R F Y ++L Q+ +G+ + + I
Sbjct: 111 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI 170
Query: 542 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLE---QLDQDAAFPTDTGGVSVDGTGQVGTY 598
HRDL NI +N +KI DFGLA+ + + DA P +
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP-----LK---------- 215
Query: 599 FYTAPE-IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP- 652
+ APE I ++D++S G++ +E++ P+ + LK+ +
Sbjct: 216 -WMAPETIFDR--VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 272
Query: 653 PSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSE 708
P ++ E + + M PS RP+ +EL E L N+L+ +
Sbjct: 273 P----DYTTPE--MYQTMLDCWHGEPSQRPTFSEL----------VEHLGNLLQANAQQD 316
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 2e-10
Identities = 47/270 (17%), Positives = 86/270 (31%), Gaps = 72/270 (26%)
Query: 372 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK--KIRLKDKSLPVNDRILR 429
MS ++ ++ + +G G FG + N L+ + A+K R L
Sbjct: 1 MSGQNNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLR------D 54
Query: 430 EVATLSRLQH-QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQEN 488
E T L + Y +F GQE
Sbjct: 55 EYRTYKLLAGCTGIPNVY--YF----------------------------------GQEG 78
Query: 489 KLESTYLYIQMEYCPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTP 547
+ + ++ +L + + F + +Q++ + IH + +++RD+ P
Sbjct: 79 L----HNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKP 134
Query: 548 NNIFFDAR-----NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 602
+N N I + DFG+ KF + Q + + GT Y +
Sbjct: 135 DNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPY--------REKKNLSGTARYMS 186
Query: 603 PE----IEQGWPKIDEKADMYSLGIVFFEL 628
EQ + D+ +LG VF
Sbjct: 187 INTHLGREQSR-----RDDLEALGHVFMYF 211
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 2e-10
Identities = 46/214 (21%), Positives = 68/214 (31%), Gaps = 75/214 (35%)
Query: 386 LQPLGHGGFGHVVLCK-NKLDGRHY----AVKKIRLKDKSLPVNDRI--LREVATLSRLQ 438
+ LG G FG VV L GR AVK LK+ + P ++ L E L ++
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM--LKENASP-SELRDLLSEFNVLKQVN 84
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
H HV++ Y G + L +
Sbjct: 85 HPHVIKLY------GA----------------------------CSQDG------PLLLI 104
Query: 499 MEYCP--------RTLRQVFESYDHFDKELAWHLF-----------------RQIVEGLA 533
+EY R R+V Y QI +G+
Sbjct: 105 VEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQ 164
Query: 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 567
++ ++HRDL NI +KI DFGL++
Sbjct: 165 YLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 2e-10
Identities = 60/368 (16%), Positives = 116/368 (31%), Gaps = 117/368 (31%)
Query: 371 NMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY---AVKKIRLKDKSLPVNDRI 427
++ +P R + +G G FG V + ++ A+K L + +
Sbjct: 13 DVLIPHER--VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKS--LSRIT-EMQQVE 67
Query: 428 --LREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTG 485
LRE + L H +V+ G+ +
Sbjct: 68 AFLREGLLMRGLNHPNVLALI------GI----------------------------MLP 93
Query: 486 QENKLESTYLYIQMEYCP--------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537
E ++ + Y R+ ++ D Q+ G+ ++
Sbjct: 94 PEG-----LPHVLLPYMCHGDLLQFIRSPQRNPTVKDLIS------FGLQVARGMEYLAE 142
Query: 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 597
Q +HRDL N D +K+ DFGLA+ + LD++
Sbjct: 143 QKFVHRDLAARNCMLDESFTVKVADFGLARDI----LDREYYSVQQHR----------HA 188
Query: 598 YF---YTAPE-IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKG 649
+TA E ++ + K+D++S G++ +EL P+ ++ + L Q
Sbjct: 189 RLPVKWTALESLQTY--RFTTKSDVWSFGVLLWELLTRGAPPYR-HIDPFDLTHFLAQGR 245
Query: 650 ELP-----PSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQDALPPQMEYELLDNI 700
LP P L ++M P+ RP+ L+ ++ I
Sbjct: 246 RLPQPEYCP----------DSLYQVMQQCWEADPAVRPTFRVLV----------GEVEQI 285
Query: 701 LRMMHSSE 708
+ +
Sbjct: 286 VSALLGDH 293
|
| >2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae} Length = 138 | Back alignment and structure |
|---|
Score = 58.9 bits (142), Expect = 3e-10
Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 2/81 (2%)
Query: 23 HSSSTVDDNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAR 82
S + S + P YPY P+++ + + S L + N++
Sbjct: 51 TLRSVDKEPVESSITLHFAMTPMYPYTAPEIEFKNVQNVMDSQLQMLKSEFKKIHNTS-- 108
Query: 83 EGRVMIFNLVEAAQEFLSEIV 103
G+ +IF + QE L E
Sbjct: 109 RGQEIIFEITSFTQEKLDEFQ 129
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 3e-10
Identities = 69/358 (19%), Positives = 119/358 (33%), Gaps = 115/358 (32%)
Query: 386 LQPLGHGGFGHVVLCK----NKLDGRHY---AVKKIRLKDKSLPVNDRI--LREVATLSR 436
+PLG G FG VV+ + +K + AVK LKD + D + E+ +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATE-KDLSDLVSEMEMMKM 96
Query: 437 L-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 495
+ +H++++ G T L
Sbjct: 97 IGKHKNIINLL------GA----------------------------CTQDG------PL 116
Query: 496 YIQMEYCP--------RTLRQVFESYDHFDKELAWHLF---------RQIVEGLAHIHGQ 538
Y+ +EY R R Y + + Q+ G+ ++ Q
Sbjct: 117 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ 176
Query: 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLE---QLDQDAAFPTDTGGVSVDGTGQV 595
IHRDL N+ N +KI DFGLA+ + + + P V
Sbjct: 177 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-----VK------- 224
Query: 596 GTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELWHPFS------TAMERQIVLSDLKQK 648
+ APE + ++D++S G++ +W F+ + + + LK+
Sbjct: 225 ----WMAPEALFDR--VYTHQSDVWSFGVL---MWEIFTLGGSPYPGIPVEELFKLLKEG 275
Query: 649 GELP-PSWVAKFSEQESLLRRLM----SPSPSDRPSATEL---LQDALPPQMEYELLD 698
+ P+ + + L +M PS RP+ +L L L E LD
Sbjct: 276 HRMDKPANC---TNE---LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLD 327
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483 | Back alignment and structure |
|---|
Score = 62.7 bits (152), Expect = 3e-10
Identities = 52/257 (20%), Positives = 81/257 (31%), Gaps = 66/257 (25%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-H 439
N F + +G G FG + L N A+K +K K + ++L E LQ
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLLYESKIYRILQGG 62
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
+ WF G E Y + M
Sbjct: 63 TGIPNVR--WF----------------------------------GVEGD----YNVLVM 82
Query: 500 EYCPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF---DAR 555
+ +L +F + L Q++ + +H + +HRD+ P+N
Sbjct: 83 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA 142
Query: 556 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP----EIEQGWPK 611
N + I DFGLAK + Q + + GT Y + IEQ
Sbjct: 143 NQVYIIDFGLAKKYRDTSTHQHIPYR--------ENKNLTGTARYASVNTHLGIEQSR-- 192
Query: 612 IDEKADMYSLGIVFFEL 628
+ D+ SLG V
Sbjct: 193 ---RDDLESLGYVLMYF 206
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364 | Back alignment and structure |
|---|
Score = 62.1 bits (151), Expect = 3e-10
Identities = 38/190 (20%), Positives = 71/190 (37%), Gaps = 37/190 (19%)
Query: 387 QPLGHGGFGHV-----VLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
P+G GGFG + ++ VK + L E+ R
Sbjct: 41 LPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPL------FTELKFYQRAAKPE 94
Query: 442 VVRYYQAWFETGVADFDG-DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
+ Q W T + G WGSG +K +Y ++ M+
Sbjct: 95 QI---QKWIRTRKLKYLGVPKYWGSGL-------------------HDKNGKSYRFMIMD 132
Query: 501 YCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND-- 557
L++++E+ F ++ L +I++ L +IH +H D+ +N+ + +N
Sbjct: 133 RFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQ 192
Query: 558 IKIGDFGLAK 567
+ + D+GLA
Sbjct: 193 VYLVDYGLAY 202
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 5e-10
Identities = 50/332 (15%), Positives = 102/332 (30%), Gaps = 96/332 (28%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR-----LKDKSLPVNDRILREVATLS 435
D + LG G F + + G + + + L ++ + +S
Sbjct: 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMS 67
Query: 436 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 495
+L H+H+V Y GV +
Sbjct: 68 KLSHKHLVLNY------GV----------------------------CVCGDE------N 87
Query: 496 YIQMEYCPRT-----LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 550
+ E+ L+ ++ + + + +Q+ + + +IH ++ NI
Sbjct: 88 ILVQEFVKFGSLDTYLK---KNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNI 144
Query: 551 --------FFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF--- 599
IK+ D G++ + L +D
Sbjct: 145 LLIREEDRKTGNPPFIKLSDPGISITV----LPKD------------------ILQERIP 182
Query: 600 YTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-PS 654
+ PE + ++ D +S G +E+ P S A++ Q L + + +LP P
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS-ALDSQRKLQFYEDRHQLPAPK 241
Query: 655 WVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686
+E +L+ M P RPS +++D
Sbjct: 242 A----AELANLINNCMDYEPDHRPSFRAIIRD 269
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 61.5 bits (149), Expect = 6e-10
Identities = 59/346 (17%), Positives = 112/346 (32%), Gaps = 70/346 (20%)
Query: 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK----DKSLPVNDRILREVATLSRL-QHQH 441
+PLG G FG V+ + + + +K + + ++ E+ L + H +
Sbjct: 28 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 87
Query: 442 VVRYYQAWFETG----------------------------VADFDGDSMWGSGTLASSTF 473
VV A + G G + +
Sbjct: 88 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPV 147
Query: 474 SNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLA 533
+ + + Q + + D E Q+ +G+
Sbjct: 148 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGME 207
Query: 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQL---DQDAAFPTDTGGVSVD 590
+ + IHRDL NI +N +KI DFGLA+ + + DA P
Sbjct: 208 FLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK------- 260
Query: 591 GTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDL 645
+ APE I ++D++S G++ +E++ P+ + L
Sbjct: 261 ---------WMAPETIFDR--VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 309
Query: 646 KQKGELP-PSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQD 686
K+ + P ++ E + + M PS RP+ +EL++
Sbjct: 310 KEGTRMRAP----DYTTPE--MYQTMLDCWHGEPSQRPTFSELVEH 349
|
| >2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 128 | Back alignment and structure |
|---|
Score = 57.2 bits (138), Expect = 6e-10
Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 3/81 (3%)
Query: 23 HSSSTVDDNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAR 82
H+ + + + E+ YP P + I E LT++ + L +QA S
Sbjct: 45 HTKAEGFMDADIPLELVFHLPVNYPSCLPGISINSE-QLTRAQCVTVKEKLLEQAESLL- 102
Query: 83 EGRVMIFNLVEAAQEFLSEIV 103
M+ LV Q+ L I+
Sbjct: 103 -SEPMVHELVLWIQQNLRHIL 122
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 1e-09
Identities = 65/356 (18%), Positives = 120/356 (33%), Gaps = 97/356 (27%)
Query: 386 LQPLGHGGFGHVVLC--KNKLDGRHY---AVKKIRLKDKSLPVNDRI--LREVATLSRLQ 438
++ +G G FG V L + AVK LK+++ + + RE A ++
Sbjct: 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKM--LKEEA-SADMQADFQREAALMAEFD 108
Query: 439 HQHVVRYYQAWFETGVADFDGDSMW------GSGTLASSTFSNRAASSADVTGQENKLES 492
+ ++V+ GV G M G L S + ++ + +
Sbjct: 109 NPNIVKLL------GVC-AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRA 161
Query: 493 TYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
P L E + RQ+ G+A++ + +HRDL N
Sbjct: 162 RVSSPG----PPPLSC---------AEQL-CIARQVAAGMAYLSERKFVHRDLATRNCLV 207
Query: 553 DARNDIKIGDFGLAKFLKLEQLD-----QDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IE 606
+KI DFGL++ + D + A P + + PE I
Sbjct: 208 GENMVVKIADFGLSR--NIYSADYYKADGNDAIP-----IR-----------WMPPESIF 249
Query: 607 QGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVA 657
+ ++D+++ G+V +E++ P+ M + V+ ++ L P
Sbjct: 250 YN--RYTTESDVWAYGVVLWEIFSYGLQPYY-GMAHEEVIYYVRDGNILACPENCPLE-- 304
Query: 658 KFSEQESLLRRLM----SPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSED 709
L LM S P+DRPS + + +L + +
Sbjct: 305 --------LYNLMRLCWSKLPADRPSFCSI----------HRILQRMCERAEGTVG 342
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 2e-09
Identities = 67/331 (20%), Positives = 102/331 (30%), Gaps = 97/331 (29%)
Query: 386 LQPLGHGGFGHVV--LCKNKLDGRHY---AVKKIRLKDKSLPVNDRI--LREVATLSRLQ 438
++ LGHG FG V + AVK L + D + L E +S+
Sbjct: 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKT--LPEVC-SEQDELDFLMEALIISKFN 91
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
HQ++VR GV +S +I
Sbjct: 92 HQNIVRCI------GV----------------------------SL------QSLPRFIL 111
Query: 499 MEYCP--------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 550
ME R R H+ R I G ++ IHRD+ N
Sbjct: 112 MELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNC 171
Query: 551 FFDARND---IKIGDFGLAKFLKLEQ---LDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 604
KIGDFG+A+ + A P V + PE
Sbjct: 172 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP-----VK-----------WMPPE 215
Query: 605 -IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELPPSWVAKF 659
+G K D +S G++ +E++ P+ + Q VL + G + P
Sbjct: 216 AFMEG--IFTSKTDTWSFGVLLWEIFSLGYMPYP-SKSNQEVLEFVTSGGRMDPPKNCP- 271
Query: 660 SEQESLLRRLM----SPSPSDRPSATELLQD 686
+ R+M P DRP+ +L+
Sbjct: 272 ----GPVYRIMTQCWQHQPEDRPNFAIILER 298
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 4e-09
Identities = 45/209 (21%), Positives = 69/209 (33%), Gaps = 70/209 (33%)
Query: 386 LQPLGHGGFGHVV------LCKNKLDGRHY-AVKKIRLKDKSLPVNDRI--LREVATLSR 436
+PLG G FG VV + K+K AVK LKD + D + E+ +
Sbjct: 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATE-KDLSDLVSEMEMMKM 142
Query: 437 L-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 495
+ +H++++ G T L
Sbjct: 143 IGKHKNIINLL------GA----------------------------CTQDG------PL 162
Query: 496 YIQMEYCP--------RTLRQVFESYDHFDKELAWHLF---------RQIVEGLAHIHGQ 538
Y+ +EY R R Y + + Q+ G+ ++ Q
Sbjct: 163 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ 222
Query: 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAK 567
IHRDL N+ N +KI DFGLA+
Sbjct: 223 KCIHRDLAARNVLVTENNVMKIADFGLAR 251
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 5e-09
Identities = 38/204 (18%), Positives = 69/204 (33%), Gaps = 55/204 (26%)
Query: 373 SLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK--KIRLKDKSLPVNDRILRE 430
S+ +F + +G G FG + L KN + A+K ++ + L E
Sbjct: 1 SMGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLH------LE 54
Query: 431 VATLSRLQH-QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENK 489
+L + + Y +F G K
Sbjct: 55 YRFYKQLGSGDGIPQVY--YF----------------------------------GPCGK 78
Query: 490 LESTYLYIQMEYCPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 548
Y + +E +L +F+ D F + + Q++ + ++H + +I+RD+ P
Sbjct: 79 ----YNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPE 134
Query: 549 NIFF-----DARNDIKIGDFGLAK 567
N + I I DF LAK
Sbjct: 135 NFLIGRPGNKTQQVIHIIDFALAK 158
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.9 bits (144), Expect = 5e-09
Identities = 94/731 (12%), Positives = 203/731 (27%), Gaps = 232/731 (31%)
Query: 23 HSSSTVDDNELLSEEITALCLPGY--PYKCPKLQITPEKGLTKSDADNLLCLLQDQANSN 80
H +++ ++I ++ + + C +Q P+ L+K + D+++ + +
Sbjct: 6 HMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHII------MSKD 59
Query: 81 AREGRVMIFNLVEAAQEFLSEIVPLGQSNESVPGLVTESSSQSFEGSAVSASKSCSSKVP 140
A G + +F + + QE E+V Q F + +
Sbjct: 60 AVSGTLRLFWTLLSKQE---EMV------------------QKFVEEVLRIN-------- 90
Query: 141 FVYGFIDLFSGCGESWHWGLGIDENRGVVPSVPSHASDGSNYEVMWRKIDKNVKPLMIPD 200
Y F+ E R PS+ + Y ++ + +
Sbjct: 91 --YKFL------MSPIK-----TEQRQ--PSMMT-----RMYIEQRDRLYNDNQVF---- 126
Query: 201 ANQGTALIPSAKLDTVKEENEDDNRSISTTDSSTSPMEEWVENGIKGENRDSL----LQD 256
AK + + + + P + + +G+ G + +
Sbjct: 127 ----------AKYNVSRLQPYL---KLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLS 173
Query: 257 HGSNNDGGDTEIDRLESFSFA----SLGQDQASQDIEKDLILVHLLRLACQSTGSLTDAL 312
+ F +L + +L L +L Q + T
Sbjct: 174 Y-----------KVQCKMDFKIFWLNLKNCN-----SPETVLEMLQKLLYQIDPNWTSRS 217
Query: 313 PQIATELYNLGIFSERGRDL-ASKP------------SSQFNKTFNQVFHQKM-VSSR-- 356
+ + R L SKP +++ FN K+ +++R
Sbjct: 218 DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFN--LSCKILLTTRFK 275
Query: 357 -------VSQFWKPSVDSGSPNMSLPSS-----RYLN-DFEEL-------QPLGHGGFGH 396
+ S+D S ++ +YL+ ++L P
Sbjct: 276 QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIA- 334
Query: 397 VVLCKNKLDG----RHYAVKKI-RLKDKSL----PVNDR-------ILRE-----VATLS 435
++ L +H K+ + + SL P R + LS
Sbjct: 335 -ESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLS 393
Query: 436 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 495
+ WF+ + + + S + ++ K + +
Sbjct: 394 LI-----------WFD-VIKSDVMVVV--------NKLHKY--SLVE---KQPKESTISI 428
Query: 496 Y-IQMEYCPRTL------RQVFESYDHFDKELAWHLFRQIVEG-----LA-HIHGQGIIH 542
I +E + R + + Y+ + L ++ + H+
Sbjct: 429 PSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPE 488
Query: 543 RDLTPNNIFFDARNDIKIGDFGLAKFL--KLEQLDQDAAFPTDTGGVSVDGTGQVGTYFY 600
R +F D R FL K+ + + G ++ Q+ Y
Sbjct: 489 RMTLFRMVFLDFR------------FLEQKIRH----DSTAWNASGSILNTLQQLKFY-- 530
Query: 601 TAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLS---DLKQKGELPPSWVA 657
P I PK + + + F +E ++ S DL + + A
Sbjct: 531 -KPYICDNDPKYERLVN---------AILD-FLPKIEENLICSKYTDLLRIALMAED-EA 578
Query: 658 KFSEQESLLRR 668
F E ++R
Sbjct: 579 IFEEAHKQVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.5 bits (143), Expect = 7e-09
Identities = 95/697 (13%), Positives = 185/697 (26%), Gaps = 233/697 (33%)
Query: 434 LSRLQHQH--VVRYYQAWFETGVADFD----GDSMWGSGTLASSTFSNRAASSADVTGQE 487
Q+Q+ ++ ++ F V +FD D S S + +
Sbjct: 11 TGEHQYQYKDILSVFEDAF---VDNFDCKDVQDMP-------KSILSKEEID--HIIMSK 58
Query: 488 NKLESTY-LYIQMEYCPRTLRQVF-ESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDL 545
+ + T L+ + + Q F E + + + + + I RD
Sbjct: 59 DAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDR 118
Query: 546 TPN-NIFFDARNDIKIGDFGLAKFLKLEQ-LDQDAAFPTDTGGVSVDGTGQVGTYFYTA- 602
N N F N + +LKL Q L + V +DG G +
Sbjct: 119 LYNDNQVFAKYN-VSRLQ----PYLKLRQALLEL----RPAKNVLIDGVLGSGKTWVALD 169
Query: 603 ----PEIEQG------WPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELP 652
+++ W + ++ + +L + + + +
Sbjct: 170 VCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQID---------PNWTSRSDHS 220
Query: 653 PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSI 712
+ + ++ LRRL+ +P LL +L N+ ++
Sbjct: 221 SNIKLRIHSIQAELRRLL----KSKPYENCLL-----------VLLNV-------QNAKA 258
Query: 713 YDKVVSSIFDEETLDMKHHAGTLRLNRDNTSSIQYSDLDTELRDYVVQV----------T 762
++ F+ L R + L ++
Sbjct: 259 WNA-----FN-------LSCKILLTTRF--KQV-TDFLSAATTTHISLDHHSMTLTPDEV 303
Query: 763 KEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELS---HELRLPFIRWAIS 819
K + K+L+ P D P+ + LS +R W
Sbjct: 304 KSLL----LKYLDCRP----QDLPR--------EVLTTNPRRLSIIAESIRDGLATW--- 344
Query: 820 NQKSSFKRYEISSVYRRAIGHS----PPN----RY-----LQGDFDIIGGASALTEAEVL 866
++K + I S P + I +L
Sbjct: 345 ---DNWKHVNCDKL-TTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI--------PTILL 392
Query: 867 KV---------TMDIVTRFFHAESC-------------DIHLN-----------HGDLLE 893
+ M +V + H S I+L H +++
Sbjct: 393 SLIWFDVIKSDVMVVVNK-LHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVD 451
Query: 894 A--------------------IWSWAG---IKAEHREKVAELLAMMGSLRPQSSEW-KSK 929
+S G EH E++ + R + + K
Sbjct: 452 HYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFR-----FLEQK 506
Query: 930 WVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLR 989
IR N + +++N LQ L+F + + + P + L L
Sbjct: 507 ---IRHDSTA-WNASGSILNTLQQ--LKF----------YKPYICDNDPKYERLVNAILD 550
Query: 990 -IWRIEKNIYID--------ALMPPIESYHRNLFFQV 1017
+ +IE+N+ ALM E+ QV
Sbjct: 551 FLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQV 587
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.0 bits (121), Expect = 3e-06
Identities = 60/416 (14%), Positives = 109/416 (26%), Gaps = 125/416 (30%)
Query: 825 FKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDI 884
F+ E Y+ + +FD K D+ E D
Sbjct: 9 FETGEHQYQYKDILSVFEDA--FVDNFDC-------------KDVQDMPKSILSKEEIDH 53
Query: 885 HLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEW-KSKWVVIRRQLLQELNL 943
+ D + +E++ + + + + ++ S +RQ +
Sbjct: 54 IIMSKDAVSGTLRLFWTLLSKQEEMVQ--KFVEEVLRINYKFLMSPIKTEQRQPSMMTRM 111
Query: 944 AEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALM 1003
+RL F A + RL+ P K R+AL EL R KN+ ID +
Sbjct: 112 YIEQRDRLYNDNQVF---AKYNVSRLQ---PYLK-LRQALLEL-----RPAKNVLIDG-V 158
Query: 1004 PPI------------ESYHRNLFFQVF--SVKEKYPATLVEGTLLAVGGRYDYLLHRMWD 1049
+ F++F ++K V L LL+++ D
Sbjct: 159 LGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQK-------LLYQI-D 210
Query: 1050 REYVGYASRT-NPPSGVG-ASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVER 1107
+ + + N + L +++ KP N LLV
Sbjct: 211 PNWTSRSDHSSNIKLRIHSIQAELRRLLKS-----KPYEN--------------CLLV-- 249
Query: 1108 MELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILT--DTGAQKGLV--KVRH 1163
+ + F ++ C ++LT L H
Sbjct: 250 ---LLNVQNAKAWNAF------------------NLSCKILLTTRFKQVTDFLSAATTTH 288
Query: 1164 LDVKKEKEV--QRESLVRF---------------------LLDAIASQFRN-PSLW 1195
+ + E L IA R+ + W
Sbjct: 289 ISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATW 344
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.2 bits (111), Expect = 3e-05
Identities = 81/550 (14%), Positives = 155/550 (28%), Gaps = 184/550 (33%)
Query: 684 LQDALPPQMEYELLDNILRMMHSSEDTS-IYDKVVSSIFDEETLDMKHHAGTLRLNRD-N 741
+QD + E +D+I+ + T ++ ++S EE + K LR+N
Sbjct: 38 VQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSK--QEEMVQ-KFVEEVLRINYKFL 94
Query: 742 TSSIQYSDLDTEL--RDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHG 799
S I+ + R Y+ Q + L D F + V
Sbjct: 95 MSPIKTEQRQPSMMTRMYIEQRDR-----------------LYNDNQVFAKYNVS----- 132
Query: 800 GDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRY--LQGDFDIIGGA 857
L+ +LR A+ + P + + G G+
Sbjct: 133 --RLQPYLKLRQ-----ALLELR--------------------PAKNVLIDGV----LGS 161
Query: 858 --SALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAM 915
+ + +V + + + I W +K + + +L M
Sbjct: 162 GKTWVA-LDVCL-SYKVQCKM----DFKIF------------WLNLKNCNSPE--TVLEM 201
Query: 916 MGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPA 975
+ L I + + + R+ LR L
Sbjct: 202 LQKL----------LYQIDPNWTSRSDHSSNIKLRI-----------HSIQAELRRLL-K 239
Query: 976 DKPTRKAL---DELY-LRIW-------RI-----EKNIYIDALMPPIESYHRNLFFQVFS 1019
KP L + + W +I K + D L ++ +
Sbjct: 240 SKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQV-TDFLSAATTTH-------ISL 291
Query: 1020 VKEKYPATLVEG-TLLAVGGRYDYLLHRMWD--REYVGYASRTNPP--SGVGASLALETI 1074
T E +LL YL R D RE TNP S + S+
Sbjct: 292 DHHSMTLTPDEVKSLLL-----KYLDCRPQDLPRE----VLTTNPRRLSIIAESIRDGLA 342
Query: 1075 IQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQF---------VP 1125
+K V + T+++ S + L + F
Sbjct: 343 TWDN---WKHVNCDKLTTIIESS-------------LNVLEPAEYRKMFDRLSVFPPSAH 386
Query: 1126 VPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVR-----------HLDVKKEKEVQR 1174
+P L+ + + D+ ++ + + LV+ + +L++K + E
Sbjct: 387 IPTILLSLIWFDVIKSDVM---VVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLE-NE 442
Query: 1175 ESLVRFLLDA 1184
+L R ++D
Sbjct: 443 YALHRSIVDH 452
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 8e-09
Identities = 71/389 (18%), Positives = 120/389 (30%), Gaps = 99/389 (25%)
Query: 330 RDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYL--NDFEELQ 387
+L + + + K+ +S + + P+ S+ + + + ++
Sbjct: 18 ENLYFQGAMGSELQSPEYKLSKLRTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIR 77
Query: 388 PLGHGGFGHVV--LCKNKLDGRHY---AVKKIRLKDKSLPVNDRI--LREVATLSRLQHQ 440
LGHG FG V + AVK L + D + L E +S+ HQ
Sbjct: 78 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKT--LPEVC-SEQDELDFLMEALIISKFNHQ 134
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
++VR GV +S +I +E
Sbjct: 135 NIVRCI------GV----------------------------SL------QSLPRFILLE 154
Query: 501 YCP--------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
R R H+ R I G ++ IHRD+ N
Sbjct: 155 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLL 214
Query: 553 DARND---IKIGDFGLAKFLKLEQ---LDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-I 605
KIGDFG+A+ + A P V + PE
Sbjct: 215 TCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLP-----VK-----------WMPPEAF 258
Query: 606 EQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELPPSWVAKFSE 661
+G K D +S G++ +E++ P+ + Q VL + G + P
Sbjct: 259 MEG--IFTSKTDTWSFGVLLWEIFSLGYMPYP-SKSNQEVLEFVTSGGRMDPPKNCP--- 312
Query: 662 QESLLRRLM----SPSPSDRPSATELLQD 686
+ R+M P DRP+ +L+
Sbjct: 313 --GPVYRIMTQCWQHQPEDRPNFAIILER 339
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 1e-08
Identities = 24/193 (12%), Positives = 61/193 (31%), Gaps = 43/193 (22%)
Query: 387 QPLGHGGFGHV--------VLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 438
G + + C + + +++K + R+ E R
Sbjct: 48 SFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLK-------LDAKDGRLFNEQNFFQRAA 100
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
V ++ + T + + G G ++K Y ++
Sbjct: 101 KPLQVNKWKKLYSTPLLAIP--TCMGFGV------------------HQDK----YRFLV 136
Query: 499 MEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-- 554
+ R+L+ + + + ++++ L +H +H ++T NIF D
Sbjct: 137 LPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPED 196
Query: 555 RNDIKIGDFGLAK 567
++ + + +G A
Sbjct: 197 QSQVTLAGYGFAF 209
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* Length = 540 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 2e-04
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 11/73 (15%)
Query: 497 IQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 555
I M Y + + V E + ++A +I E + +H +IH DLT +N FD
Sbjct: 416 IMMSYINGKLAKDVIED----NLDIA----YKIGEIVGKLHKNDVIHNDLTTSNFIFD-- 465
Query: 556 NDIKIGDFGLAKF 568
D+ I DFGL K
Sbjct: 466 KDLYIIDFGLGKI 478
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1196 | |||
| 3net_A | 465 | Histidyl-tRNA synthetase; aminoacyl-tRNA synthetas | 100.0 | |
| 4g85_A | 517 | Histidine-tRNA ligase, cytoplasmic; synthetase; 3. | 100.0 | |
| 3lc0_A | 456 | Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-t | 100.0 | |
| 4g84_A | 464 | Histidine--tRNA ligase, cytoplasmic; synthetase; 2 | 100.0 | |
| 1wu7_A | 434 | Histidyl-tRNA synthetase; ligase, structural genom | 100.0 | |
| 3od1_A | 400 | ATP phosphoribosyltransferase regulatory subunit; | 100.0 | |
| 4e51_A | 467 | Histidine--tRNA ligase; seattle structural genomic | 100.0 | |
| 1h4v_B | 421 | Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA | 100.0 | |
| 1htt_A | 423 | Histidyl-tRNA synthetase; complex (tRNA synthetase | 100.0 | |
| 3rac_A | 373 | Histidine-tRNA ligase; structural genomics, PSI-bi | 100.0 | |
| 1qe0_A | 420 | Histidyl-tRNA synthetase; class II tRNA synthetase | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 1z7m_A | 344 | ATP phosphoribosyltransferase regulatory subunit; | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 1usy_A | 275 | ATP phosphoribosyltransferase regulatory subunit; | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 2j3l_A | 572 | Prolyl-tRNA synthetase; class II aminoacyl- T synt | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 1evl_A | 401 | Threonyl-tRNA synthetase; amino acid recognition, | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 2i4l_A | 458 | Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseud | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 1hc7_A | 477 | Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 3a32_A | 471 | Probable threonyl-tRNA synthetase 1; aeropyrum per | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 1nyr_A | 645 | Threonyl-tRNA synthetase 1; ATP, threonine, ligase | 100.0 | |
| 1nj8_A | 459 | Proline-tRNA synthetase, proline--tRNA ligase; cla | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 1qf6_A | 642 | THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, m | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 3uh0_A | 460 | Threonyl-tRNA synthetase, mitochondrial; threonine | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 1nj1_A | 501 | PROR, proline-tRNA synthetase, proline--tRNA ligas | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 2zt5_A | 693 | Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP | 99.97 | |
| 1ati_A | 505 | Glycyl-tRNA synthetase; protein biosynthesis, liga | 99.96 | |
| 4hvc_A | 519 | Bifunctional glutamate/proline--tRNA ligase; ligas | 99.95 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.95 | |
| 3ial_A | 518 | Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, | 99.93 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.87 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.84 | |
| 3ikl_A | 459 | DNA polymerase subunit gamma-2, mitochondrial; tra | 99.81 | |
| 1g5h_A | 454 | Mitochondrial DNA polymerase accessory subunit; in | 99.8 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.75 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.56 | |
| 2dq3_A | 425 | Seryl-tRNA synthetase; coiled-coil, homodimer, str | 99.51 | |
| 2ebm_A | 128 | RWD domain-containing protein 1; alpha+beta sandwi | 99.45 | |
| 2yz0_A | 138 | Serine/threonine-protein kinase GCN2; A-B-B-B-B-A- | 99.44 | |
| 1nnh_A | 294 | Asparaginyl-tRNA synthetase-related peptide; struc | 99.4 | |
| 2day_A | 128 | Ring finger protein 25; ligase, metal-binding, UB1 | 99.4 | |
| 1ses_A | 421 | Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A | 99.39 | |
| 2dq0_A | 455 | Seryl-tRNA synthetase; coiled-coil, homodimer, str | 99.39 | |
| 1ukx_A | 137 | GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple | 99.37 | |
| 3dsq_A | 288 | Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-t | 99.34 | |
| 2ebk_A | 128 | RWD domain-containing protein 3; alpha+beta sandwi | 99.32 | |
| 2cja_A | 522 | Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE | 99.29 | |
| 3vbb_A | 522 | Seryl-tRNA synthetase, cytoplasmic; coiled-coil, l | 99.14 | |
| 3qtc_A | 290 | Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthet | 99.11 | |
| 1v95_A | 130 | Nuclear receptor coactivator 5; coactivator indepe | 99.08 | |
| 1wle_A | 501 | Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bo | 99.04 | |
| 2dax_A | 152 | Protein C21ORF6; RWD domain, alpha+beta sandwich f | 99.03 | |
| 3lss_A | 484 | Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, | 99.01 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.97 | |
| 3qne_A | 485 | Seryl-tRNA synthetase, cytoplasmic; amino acid bio | 98.95 | |
| 3err_A | 536 | Fusion protein of microtubule binding domain from | 98.88 | |
| 2daw_A | 154 | RWD domain containing protein 2; alpha+beta sandwi | 98.88 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.83 | |
| 1x54_A | 434 | Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthe | 98.71 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.7 | |
| 1wyd_A | 429 | Hypothetical aspartyl-tRNA synthetase; archaea, LI | 98.66 | |
| 1n9w_A | 422 | Aspartyl-tRNA synthetase 2; biosynthetic protein; | 98.6 | |
| 3mf2_A | 346 | BLL0957 protein; aminoacyl-tRNA synthetase, seryl- | 98.49 | |
| 1eov_A | 487 | ASPRS, aspartyl-tRNA synthetase; aminoacyl tRNA sy | 98.43 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.24 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.19 | |
| 3a74_A | 493 | Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, | 98.18 | |
| 1e1o_A | 504 | Lysyl-tRNA synthetase, heat inducible; ligase, ami | 97.89 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 97.88 | |
| 1b7y_A | 350 | Phers, protein (phenylalanyl-tRNA synthetase); enz | 97.88 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 97.85 | |
| 3l4g_A | 508 | Phenylalanyl-tRNA synthetase alpha chain; aminoacy | 97.8 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 97.76 | |
| 3a5y_A | 345 | GENX, putative lysyl-tRNA synthetase; aminoacyl-tR | 97.72 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.64 | |
| 2du3_A | 534 | O-phosphoseryl-tRNA synthetase; alpha4 tetramer, l | 97.61 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 97.6 | |
| 3nem_A | 438 | Aspartyl-tRNA synthetase; rossmann fold, OB fold, | 97.49 | |
| 2xgt_A | 435 | Asparaginyl-tRNA synthetase, cytoplasmic; ligase, | 97.45 | |
| 2du7_A | 549 | O-phosphoseryl-tRNA synthetase; alpha4 tetramer, l | 97.27 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 97.27 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.22 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 97.17 | |
| 1c0a_A | 585 | Aspartyl tRNA synthetase; protein-RNA complex, lig | 97.03 | |
| 1l0w_A | 580 | Aspartyl-tRNA synthetase; space-grown crystal, dim | 97.01 | |
| 4ex5_A | 529 | Lysine--tRNA ligase; structural genomics, niaid, n | 96.9 | |
| 3bju_A | 521 | Lysyl-tRNA synthetase; aminoacyl-tRNA synthetase, | 96.88 | |
| 3pco_A | 327 | Phenylalanyl-tRNA synthetase, alpha subunit; amino | 96.88 | |
| 2rhq_A | 294 | Phenylalanyl-tRNA synthetase alpha chain; heterote | 96.86 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 96.86 | |
| 3m4p_A | 456 | Ehasnrs, asparaginyl-tRNA synthetase, putative; am | 96.85 | |
| 3ig2_A | 213 | Phenylalanyl-tRNA synthetase beta chain; phers, MC | 96.7 | |
| 2odr_B | 648 | Phosphoseryl-tRNA synthetase; phosphoserine tRNA s | 96.62 | |
| 2odr_A | 665 | Phosphoseryl-tRNA synthetase; phosphoserine tRNA s | 96.61 | |
| 2odr_D | 685 | Phosphoseryl-tRNA synthetase; phosphoserine tRNA s | 96.6 | |
| 2odr_C | 701 | Phosphoseryl-tRNA synthetase; phosphoserine tRNA s | 96.6 | |
| 4ah6_A | 617 | Aspartate--tRNA ligase, mitochondrial; 3.70A {Homo | 96.55 | |
| 3ica_A | 213 | Phenylalanyl-tRNA synthetase beta chain; APC61692. | 96.54 | |
| 3i7f_A | 548 | Aspartyl-tRNA synthetase; tRNA ligase, APO, ATP-bi | 96.39 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 96.21 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 96.05 | |
| 3l4g_B | 589 | Phenylalanyl-tRNA synthetase beta chain; aminoacyl | 95.87 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 95.66 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 95.5 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 95.41 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 95.32 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 95.23 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 95.01 | |
| 2rhq_B | 795 | Phenylalanyl-tRNA synthetase beta chain; heterotet | 94.74 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 94.57 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 94.21 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 94.08 | |
| 1b7y_B | 785 | Phers, protein (phenylalanyl-tRNA synthetase); enz | 93.87 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 91.16 | |
| 3cmq_A | 415 | Phenylalanyl-tRNA synthetase, mitochondrial; class | 89.39 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 88.41 | |
| 3g15_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 85.86 | |
| 3pco_B | 795 | Phenylalanyl-tRNA synthetase, beta chain; aminoacy | 82.42 |
| >3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-69 Score=651.00 Aligned_cols=413 Identities=15% Similarity=0.203 Sum_probs=354.9
Q ss_pred cCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCCCcccccc-eEEEeec---C----------
Q 000993 738 NRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQFKRN-TVKLLTH---G---------- 799 (1196)
Q Consensus 738 ~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~~~~~-my~f~D~---~---------- 799 (1196)
.+.|+|++|++|.++.+++++++.++++|++|||++|.||+| ++..+| +..++ ||+|.|+ +
T Consensus 12 ~~~p~G~~D~lP~~~~~~~~i~~~l~~~~~~~Gy~~i~tP~~E~~~~~~~~G-~~~ke~m~~~~d~~~~g~~~~~~~~~~ 90 (465)
T 3net_A 12 FSTPSGFPEFLPSEKRLELYLLDTIRRVYESYGFTPIETPAVERLEVLQAKG-NQGDNIIYGLEPILPPNRQAEKDKSGD 90 (465)
T ss_dssp CSCCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEHHHHHGGG-CC--CBEEEEEEEC-------------
T ss_pred ccCCCCccccCHHHHHHHHHHHHHHHHHHHHcCCEEeeccccccHHHHhccC-CCCccceEEEecccccccccccccccC
Confidence 367899999999999999999999999999999999999999 333345 55677 9999999 3
Q ss_pred --CceEeecCCCcHHHHHHHHhCC---CCceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccc--hHHHHHHHHH
Q 000993 800 --GDLLELSHELRLPFIRWAISNQ---KSSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALT--EAEVLKVTMD 871 (1196)
Q Consensus 800 --G~~laLRPD~T~~iaR~~a~~~---~~P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~a--DaEvI~la~~ 871 (1196)
|+.++||||+|+|+||+++++. ..|+|+||+|+|||+++||.+|. ||+|+|+|+||.+++.+ |+|||.++.+
T Consensus 91 ~~g~~l~LRpd~T~~~aR~~~~~~~~~~~p~r~~y~g~vfR~e~~~~gr~Ref~Q~g~ei~G~~~~~a~~DaEvi~l~~~ 170 (465)
T 3net_A 91 TGSEARALKFDQTVPLAAYIARHLNDLTFPFARYQMDVVFRGERAKDGRFRQFRQCDIDVVGREKLSLLYDAQMPAIITE 170 (465)
T ss_dssp ---CCEEECSCSHHHHHHHHHHHGGGSCSSEEEEECCEEECBC------CCEEEEEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred CCCCEEEeCCCChHHHHHHHHhcccccCCCeEEEEeccEEecCCCCCCCcceeEEeeEEEECCCCccchhhHHHHHHHHH
Confidence 8999999999999999999864 46999999999999999987665 59999999999999999 9999999999
Q ss_pred HHHHcCCCCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHH
Q 000993 872 IVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRL 951 (1196)
Q Consensus 872 ~L~~lgi~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l 951 (1196)
+|+.||+.+ ++|+|||+++++++++.+|++++++..++++|+++| +.++++++.++. +.+++++.++.+
T Consensus 171 ~l~~lgl~~-~~i~in~~~~l~~~l~~~g~~~~~~~~~~~~ld~~~---------~~~~~~~~~~l~-~~~l~~~~~~~l 239 (465)
T 3net_A 171 IFEAVNIGD-FVIRINNRKVLTGFFQSLNISETQIKSCISIIDNLE---------KIGEAKVKLELE-KEGINPEQTQKI 239 (465)
T ss_dssp HHHHHTCSC-EEEEEEEHHHHHHHHHHTTCCHHHHHHHHHHHTTHH---------HHHHHHHHHHHH-HTTCCHHHHHHH
T ss_pred HHHHcCCCc-eEEEECCHHHHHHHHHHcCCCHHHHHHHHHHHHhcc---------ccCHHHHHHHHH-hcCCCHHHHHHH
Confidence 999999985 999999999999999999999998888888888877 667777866665 489999999999
Q ss_pred HHHHHHhcCChhhHHHHHhccC---CCChHHHHHHHHH--H-HHHcCCCce----EEEcCCCCCCCCCccceEEEEEecC
Q 000993 952 QTVGLRFCGAADQALPRLRGAL---PADKPTRKALDEL--Y-LRIWRIEKN----IYIDALMPPIESYHRNLFFQVFSVK 1021 (1196)
Q Consensus 952 ~~l~~~~~g~~~~~l~~l~~~~---~~~~~~~~~l~~L--~-l~~~g~~~~----i~~Dl~lvrgl~YYTG~vFe~~~~~ 1021 (1196)
..++ .+.|+..++++++++++ ..++.+.+++++| . ++.+ +..+ +.||++++||++||||+|||+|..+
T Consensus 240 ~~l~-~~~g~~~~~l~~l~~~~~~~~~~~~~~~~l~~l~~~~l~~~-~~~~~~~~~~~D~~lvrgldYYtG~vFe~~~~~ 317 (465)
T 3net_A 240 IDFV-KIDGSVDDVLDKLKHLSQTLPESEQFNLGVSELETVITGVR-NLGVPDKRFCIDLAIARGLNYYTGTVYETTLIG 317 (465)
T ss_dssp HHHH-TCCSCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH-HTTCCGGGEEECTTCCCCSSSEEEEEEEEEETT
T ss_pred HHHH-HhcCChHHHHHHHHHhhhccccChHHHHHHHHHHHHHHHHh-cccccCceEEEccCccCCCcccCceEEEEEECC
Confidence 9998 68898888999999875 7788888999888 3 4555 4446 9999999999999999999999976
Q ss_pred CCCccccccccccccccccchhhhhc-cccccccccCCCCCCCcceecccHHHHHhhccCCCCCCC-CCCCceEEEEEcC
Q 000993 1022 EKYPATLVEGTLLAVGGRYDYLLHRM-WDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVR-NEAGTSVLVCSRG 1099 (1196)
Q Consensus 1022 ~~~~~~~~~~~~I~~GGRYD~L~~~f-g~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~-~~~~~~vlv~~~~ 1099 (1196)
.+ .+++||+|||||+|+++| |+ ++||||||+|+|||+.+|.+....+. ...+.+|+|++.+
T Consensus 318 ~~------~~~~i~~GGRYD~L~~~f~g~-----------~~pavGfaiGieRli~~L~e~g~~p~~~~~p~~V~Vi~~~ 380 (465)
T 3net_A 318 HE------ALGSICSGGRYEELVGTFIGE-----------KMPGVGISIGLTRLISRLLKAGILNTLPPTPAQVVVVNMQ 380 (465)
T ss_dssp CG------GGCCSSEEEEESSSSGGGTCS-----------CCCEEEEEEEHHHHHHHHHHTTSSCCCCSCSCCEEECCSC
T ss_pred CC------ccceecccccHHHHhhhhcCC-----------CCceeeeeccHHHHHHHHHHcCCCCCcCCCCCeEEEEEcC
Confidence 42 235899999999998877 43 27999999999999998874332221 3467899999885
Q ss_pred CCchHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCC-eEEEEEcCCCcccccchHHHH
Q 000993 1100 GGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKG-LVKVRHLDVKKEKEVQRESLV 1178 (1196)
Q Consensus 1100 ~~~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g-~v~vk~l~~g~q~~v~~~el~ 1178 (1196)
++...+|++++++||++|++|++++. ++++++++++|++.|+|++|++|++ +++| +|+||||.+|+|..+++++++
T Consensus 381 -~~~~~~A~~la~~LR~~Gi~ve~d~~-~~sl~~q~k~A~~~g~p~~iiiG~~-~~~g~~V~vk~~~t~eq~~v~~~el~ 457 (465)
T 3net_A 381 -DELMPTYLKVSQQLRQAGLNVITNFE-KRQLGKQFQAADKQGIRFCVIIGAD-EAAAQKSSLKDLQSGEQVEVALADLA 457 (465)
T ss_dssp -GGGHHHHHHHHHHHHHTTCCEEECCS-CCCHHHHHHHHHHHTCCEEEECCHH-HHHTTCCEEEETTTTEEEECC-CCHH
T ss_pred -HHHHHHHHHHHHHHHHCCCEEEEEeC-CCCHHHHHHHHHHcCCCEEEEECch-hhcCCEEEEEECCCCceEEeeHHHHH
Confidence 67889999999999999999998877 5799999999999999999999999 9999 999999999999999999999
Q ss_pred HHHHHH
Q 000993 1179 RFLLDA 1184 (1196)
Q Consensus 1179 ~~l~~~ 1184 (1196)
+.|+++
T Consensus 458 ~~l~~~ 463 (465)
T 3net_A 458 EEIKRR 463 (465)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 998765
|
| >4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-69 Score=654.82 Aligned_cols=430 Identities=25% Similarity=0.421 Sum_probs=360.0
Q ss_pred cccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCCCcccccceEEEeecCCceEeecCCCcH
Q 000993 736 RLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQFKRNTVKLLTHGGDLLELSHELRL 811 (1196)
Q Consensus 736 ~~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~ 811 (1196)
.+-+.|+|++||+|.++.++++|++.++++|++|||++|.||+| ++.++..+..+.||+|.|++|+.++||||+|+
T Consensus 65 ~~l~~P~G~~D~lP~~~~~~~~ie~~i~~~~~~~Gy~eI~tP~lE~~el~~~~~ge~~~~my~f~D~~g~~l~LRPd~T~ 144 (517)
T 4g85_A 65 FVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKDQGGELLSLRYDLTV 144 (517)
T ss_dssp CCCCCCTTCCCBCHHHHHHHHHHHHHHHHHHHHHTCEECBCCSEEEHHHHHCC------CSCBBCCTTSCCEEECSCSHH
T ss_pred eeeeCCCCCCccCHHHHHHHHHHHHHHHHHHHHCCCeEEECcccCcHHHhhcccCcCcceeEEEECCCCCEEEeCCcCcH
Confidence 34588999999999999999999999999999999999999999 45556444567899999999999999999999
Q ss_pred HHHHHHHhCCCCceeEEEecCeeecCCC--CC-CCcceeEeEEEEeCCCCc-cchHHHHHHHHHHHHHcCCCCceEEEeC
Q 000993 812 PFIRWAISNQKSSFKRYEISSVYRRAIG--HS-PPNRYLQGDFDIIGGASA-LTEAEVLKVTMDIVTRFFHAESCDIHLN 887 (1196)
Q Consensus 812 ~iaR~~a~~~~~P~r~~Y~G~VfR~e~~--~~-~~~ef~Q~GvEiiG~~~~-~aDaEvI~la~~~L~~lgi~~~~~i~Lg 887 (1196)
|+||++++|+..|+|+||+|+|||+|+| ++ +.|||+|+|+|+||..++ .+|+|+|.++.++|+.||+.+ +.|+||
T Consensus 145 ~~aR~~~~~~~~p~k~yyig~vfR~Erp~~~~GR~ReF~Q~g~ei~G~~~~~~aDaEvi~l~~~~l~~lgl~~-~~i~in 223 (517)
T 4g85_A 145 PFARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGNFDPMIPDAECLKIMCEILSSLQIGD-FLVKVN 223 (517)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEEECCCC-------CCEEEEEEEEEESCCCTTHHHHHHHHHHHHHHHHHCCCC-EEEEEE
T ss_pred HHHHHHHhCCCCCceeEEEeceEeccCcccccCccceeeeeceeccCCccchHHHHHHHHHHHHHHHhhcCCc-cccccc
Confidence 9999999998889999999999999998 33 445699999999998765 689999999999999999986 999999
Q ss_pred cHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHH
Q 000993 888 HGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALP 967 (1196)
Q Consensus 888 ~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~ 967 (1196)
|+++++++++.+|++++..+.+..+++++| +.++++++++++...+++++.++.+..++ ...|..+ .++
T Consensus 224 ~~~~l~~~~~~~~~~~~~~~~~~~~ld~ld---------k~~~~~~~~~l~~~~~~~~~~~~~l~~~~-~~~g~~~-~~~ 292 (517)
T 4g85_A 224 DRRILDGMFAICGVSDSKFRTICSSVDKLD---------KVSWEEVKNEMVGEKGLAPEVADRIGDYV-QQHGGVS-LVE 292 (517)
T ss_dssp EHHHHHHHHHHHTCCHHHHHHHHHHHHTTT---------TSCHHHHHHHHHHHTCCCHHHHHHHHHHH-HCCBSHH-HHH
T ss_pred chhhHHHHHHhhcchHHHHHHHHHHHhhhc---------chhHHHHHHHHHhhcCCCHHHHHHHHHHH-HhcCCch-HHH
Confidence 999999999999999999999999998887 56678888999988999999999999988 4666643 333
Q ss_pred HHhc--cCCCChHHHHHHHHH-----HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcc--cccccccccccc
Q 000993 968 RLRG--ALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPA--TLVEGTLLAVGG 1038 (1196)
Q Consensus 968 ~l~~--~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~--~~~~~~~I~~GG 1038 (1196)
.+.. .+..+....++++++ +++.+|+..+|.||++++||++||||+|||++..+.+.+. .....++||+||
T Consensus 293 ~~~~~~~~~~~~~~~~~l~~l~~l~~~l~~~g~~~~i~~d~~lvrgldYYtG~vFE~~~~~~~~~~~~~~~~~~~i~~GG 372 (517)
T 4g85_A 293 QLLQDPKLSQNKQALEGLGDLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGG 372 (517)
T ss_dssp HHHHCHHHHTCHHHHHHHHHHHHHHHHHHHHTCGGGEEECTTCCCCTTTCSSEEEEEEEC-------------CCSEEEE
T ss_pred HHHhcccccccHHHHHHHHHHHHHHHHHHhhCCCcceeeccccccCCcccCCeEEEEEECCcccccccCCcccceecCCC
Confidence 3332 123455566666666 7888999999999999999999999999999987654311 112235899999
Q ss_pred ccchhhhhccccccccccCCCCCCCcceecccHHHHHhhccCC---CCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHH
Q 000993 1039 RYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVD---FKPVRNEAGTSVLVCSRGGGGLLVERMELVAELW 1115 (1196)
Q Consensus 1039 RYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~---~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr 1115 (1196)
|||+|++.|+. ++.++||||||+|+|||+.+|++. ........+++|+|++.+ +....+|++++++||
T Consensus 373 RYD~Lv~~f~~--------~G~~~pavGfa~gierl~~~le~~~~~~~~~~~~~~~~V~v~~~~-~~~~~~a~~l~~~Lr 443 (517)
T 4g85_A 373 RYDGLVGMFDP--------KGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASAQ-KKLLEERLKLVSELW 443 (517)
T ss_dssp ECHHHHHTTSS--------SCCCCCEEEEEECHHHHHHHHHHHHHHTTCCCCSCCCCEEEEESS-SSCHHHHHHHHHHHH
T ss_pred chhHHHHHhcc--------CCCCCCcccccchHHHHHHHHHHhccccCccccCCCCEEEEEeCC-HHHHHHHHHHHHHHH
Confidence 99999998842 134679999999999999988632 122334567899999986 778899999999999
Q ss_pred HcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 000993 1116 EENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1186 (1196)
Q Consensus 1116 ~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~ 1186 (1196)
++|++|++++..++++++++++|++.|++|+||+|++|+++|+|+||||.+|+|..+++++|+++|+++++
T Consensus 444 ~~Gi~ve~~~~~~~~l~~q~k~A~~~g~~~~viiG~~E~~~g~v~vK~l~tgeq~~v~~~elv~~lk~~l~ 514 (517)
T 4g85_A 444 DAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIKRRTG 514 (517)
T ss_dssp HTTCCEEECSSSSCCHHHHHHHHHHHCCCEEEEECHHHHHTTEEEEEETTTCCEEEEEHHHHHHHHHHHCC
T ss_pred HCCCcEEEEeCCCCCHHHHHHHHHHCCCCEEEEECChhHhCCEEEEEECCCCCeEEeeHHHHHHHHHHHhc
Confidence 99999998876567899999999999999999999999999999999999999999999999999998754
|
| >3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-69 Score=642.98 Aligned_cols=404 Identities=16% Similarity=0.186 Sum_probs=332.5
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-CcccccceEEEeecCCceEeecCCCcHHH
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPF 813 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~i 813 (1196)
+.|+|++|++|.++.+++++++.++++|++|||++|.||+| ++..+ |+...++||+|.|++|+.++||||+|+|+
T Consensus 30 ~~p~G~~d~lP~~~~~~~~i~~~i~~~~~~~Gy~eI~tP~lE~~el~~~~~G~~~~~~my~f~D~~g~~l~LRpd~T~~~ 109 (456)
T 3lc0_A 30 EPVQGCRDFPPEAMRCRRHLFDVFHATAKTFGFEEYDAPVLESEELYIRKAGEEITEQMFNFITKGGHRVALRPEMTPSL 109 (456)
T ss_dssp SCSTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEGGGGCCCSCCHHHHTCEEEECSSSCEEEECSCSHHHH
T ss_pred cCCCCCcccCHhHHHHHHHHHHHHHHHHHHCCCEEEECCcEeehhhhccccccchhhceEEEEcCCCCEEecCCcCHHHH
Confidence 67899999999999999999999999999999999999999 44334 66678999999999999999999999999
Q ss_pred HHHHHhCCC---CceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCC--CCceEEEeC
Q 000993 814 IRWAISNQK---SSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFH--AESCDIHLN 887 (1196)
Q Consensus 814 aR~~a~~~~---~P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi--~~~~~i~Lg 887 (1196)
||+++++.. .|+|+||+|+|||+|+|+.+|. ||+|+|+|+||.+++.+|+|||.++.++|+.+|+ .+ ++|+||
T Consensus 110 aR~~~~~~~~~~~P~r~~y~g~vfR~e~~~~gR~ReF~Q~g~ei~G~~~~~~DaEvi~l~~~~l~~lgl~~~~-~~i~in 188 (456)
T 3lc0_A 110 ARLLLGKGRSLLLPAKWYSIPQCWRYEAITRGRRREHYQWNMDIVGVKSVSAEVELVCAACWAMRSLGLSSKD-VGIKVN 188 (456)
T ss_dssp HHHHHHSCTTCCSSEEEEECCEEECCCC-----CCEEEEEEEEEESCCSTHHHHHHHHHHHHHHHHTTCCTTT-EEEEEE
T ss_pred HHHHHhcCcccCCCEEEEEeccEEecCCCCCCCccceEEEEEEEEcCCChHhhHHHHHHHHHHHHHcCCCCCc-eEEEEc
Confidence 999998753 4999999999999999986655 6999999999999999999999999999999999 54 999999
Q ss_pred cHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHH
Q 000993 888 HGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALP 967 (1196)
Q Consensus 888 ~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~ 967 (1196)
|+++++++++.+|++++.+..++.++++++ +.+++++++.+. +.+++++.++.+..++. + + .++
T Consensus 189 ~~~il~~~l~~~g~~~~~~~~v~~~idkl~---------~~~~~~~~~~L~-~~~l~~~~~~~l~~~~~-~-~----~~~ 252 (456)
T 3lc0_A 189 SRKVLQTVVEQAGVTSDKFAPVCVIVDKME---------KIPREEVEAQLA-VLGLEPTVVDAITTTLS-L-K----SID 252 (456)
T ss_dssp EHHHHHHHHHHTTCCGGGHHHHHHHHTTTT---------TSCHHHHHHHHH-HTTCCHHHHHHHHHHHT-C-C----SHH
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHHHHHHhc---------ccCHHHHHHHHH-HcCCCHHHHHHHHHHhc-c-C----CHH
Confidence 999999999999999888888888888776 456777766554 47999999999988873 2 2 244
Q ss_pred HHhccCCCChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchhhh
Q 000993 968 RLRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLH 1045 (1196)
Q Consensus 968 ~l~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~ 1045 (1196)
++.+.+.......+.|+++ +++.+|+.+++.||++++||++||||+|||+|... +.+++||+|||||+|++
T Consensus 253 ~l~~~l~~~~~~~~~L~~l~~~l~~~gi~~~~~~D~~lvRgldYYTG~vFE~~~~~-------g~~~~I~~GGRYD~Lv~ 325 (456)
T 3lc0_A 253 EIAQRVGEEHEAVKELRQFFEQVEAYGYGDWVLFDASVVRGLAYYTGIVFEGFDRE-------GKFRALCGGGRYDNLLT 325 (456)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHHTCGGGEEECTTCCCSCTTCCSEEEEEEETT-------SCSSCSEEEEECSSHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHcCCCceEEEecCccCCccccCCeEEEEEECC-------CCcceEeecccHHHHHH
Confidence 4555444333445555555 77889998889999999999999999999999753 12358999999999999
Q ss_pred hccccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEEee
Q 000993 1046 RMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVP 1125 (1196)
Q Consensus 1046 ~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel~~ 1125 (1196)
.||++ .++||||||+|+|||+.+|.+..........++++|++.+ ++...+|+++|++||++|++|++++
T Consensus 326 ~fg~~---------~~~PavGFaig~eRl~~~l~~~~~~~~~~~~~~v~v~~~~-~~~~~~a~~la~~LR~~Gi~ve~~~ 395 (456)
T 3lc0_A 326 TYGSP---------TPIPCAGFGFGDCVIVELLQEKRLLPDIPHVVDDVVIPFD-ESMRPHALAVLRRLRDAGRSADIIL 395 (456)
T ss_dssp HTTCS---------SCCCEEEEEEESSHHHHHHHHTTCCCCCCCCEEEEEEESS-GGGHHHHHHHHHHHHHTTCCEEECC
T ss_pred HhCCC---------CCCCEEEEEeEHHHHHHHHHhcCCCCccCCCCcEEEEEcC-HHHHHHHHHHHHHHHHCCCeEEEec
Confidence 99764 1369999999999999988743222223345789999986 6678899999999999999999888
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHH
Q 000993 1126 VPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESL 1177 (1196)
Q Consensus 1126 ~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el 1177 (1196)
. .++++++++||++.|++|+||+|++|+++|+|+||||.+|+|..+++++.
T Consensus 396 ~-~~slkkq~k~A~k~ga~~vviiGe~E~~~g~v~vK~l~tgeQ~~~~~~~~ 446 (456)
T 3lc0_A 396 D-KKKVVQAFNYADRVGAVRAVLVAPEEWERGEVQVKMLREGTGKEEGGAER 446 (456)
T ss_dssp S-CCCHHHHHHHHHHTTEEEEEEECHHHHHTTEEEEEECC------------
T ss_pred C-CCCHHHHHHHHHHcCCCEEEEECCchhcCCeEEEEECCCCCeEEeccccc
Confidence 7 57899999999999999999999999999999999999999999988764
|
| >4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-68 Score=641.24 Aligned_cols=428 Identities=25% Similarity=0.423 Sum_probs=361.1
Q ss_pred cCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCCCcccccceEEEeecCCceEeecCCCcHHH
Q 000993 738 NRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPF 813 (1196)
Q Consensus 738 ~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~i 813 (1196)
-+.|+|++||+|.++.++++|++.++++|++|||++|.||+| ++.++..+..++||+|.|++|+.++||||+|+|+
T Consensus 14 ~~~p~G~~D~lP~~~~~~~~i~~~~~~~~~~~Gy~eI~tP~le~~el~~~~~g~~~~~~y~f~D~~g~~l~LRPd~T~~~ 93 (464)
T 4g84_A 14 LKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKDQGGELLSLRYDLTVPF 93 (464)
T ss_dssp CCCCTTCCCBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHTTSCC----CCCBBCCCSSCCEEECSCSHHHH
T ss_pred eeCCCCcCccCHHHHHHHHHHHHHHHHHHHHCCCeEEECcccCcHHHhccccCcCcceeEEEECCCCCEEEeCCcCcHHH
Confidence 367999999999999999999999999999999999999999 4555544456889999999999999999999999
Q ss_pred HHHHHhCCCCceeEEEecCeeecCCCC--C-CCcceeEeEEEEeCCCCc-cchHHHHHHHHHHHHHcCCCCceEEEeCcH
Q 000993 814 IRWAISNQKSSFKRYEISSVYRRAIGH--S-PPNRYLQGDFDIIGGASA-LTEAEVLKVTMDIVTRFFHAESCDIHLNHG 889 (1196)
Q Consensus 814 aR~~a~~~~~P~r~~Y~G~VfR~e~~~--~-~~~ef~Q~GvEiiG~~~~-~aDaEvI~la~~~L~~lgi~~~~~i~Lg~~ 889 (1196)
||++++|+..|+|+||+|+|||+|+|+ . +.|||+|+|+|+||..++ .+|+|+|.++.++|+.+|+.+ +.++|||+
T Consensus 94 aR~~~~~~~~p~k~~y~g~vfR~erp~~~~gR~Ref~Q~g~ei~G~~~~~~aDaEvi~l~~~~l~~lgl~~-~~i~i~~~ 172 (464)
T 4g84_A 94 ARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGNFDPMIPDAECLKIMCEILSSLQIGD-FLVKVNDR 172 (464)
T ss_dssp HHHHHHTTCSCEEEEEEEEEECCCC------CCSEEEEEEEEEESCCSTTHHHHHHHHHHHHHHHHHTCCC-EEEEEEEH
T ss_pred HHHHHhcCCCCceeEEEecceeccCCccccCccceeeecceeccCCccchhhHHHHHHHHHHHHHHhCCCC-cceeecch
Confidence 999999988899999999999999884 3 445799999999998665 689999999999999999986 99999999
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHHH
Q 000993 890 DLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRL 969 (1196)
Q Consensus 890 ~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l 969 (1196)
++++++++.++++++..+.+..++++++ +.++++++++++...+++++.++.+..++ ...|.. +.++.+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~---------~~~~~~~~~~l~~~~~~~~~~~~~l~~~~-~~~g~~-~~~~~~ 241 (464)
T 4g84_A 173 RILDGMFAICGVSDSKFRTICSSVDKLD---------KVSWEEVKNEMVGEKGLAPEVADRIGDYV-QQHGGV-SLVEQL 241 (464)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHGGGG---------TSCHHHHHHHHHHTTCCCHHHHHHHHHHH-TCEESH-HHHHHH
T ss_pred hhHHHHHHhhcCcHHHHHHHHHHHHHhc---------hhhHHHHHHHHHhhcCCCHHHHHHHHHHH-HhcCCc-hHHHHH
Confidence 9999999999999999999999998887 45678888889888999999999999888 455653 334433
Q ss_pred hc--cCCCChHHHHHHHHH-----HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcc--cccccccccccccc
Q 000993 970 RG--ALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPA--TLVEGTLLAVGGRY 1040 (1196)
Q Consensus 970 ~~--~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~--~~~~~~~I~~GGRY 1040 (1196)
.. .+..+....+++++| +++.+|+..+|.||++++||++||||+|||++..+.+.+. .....++||+||||
T Consensus 242 ~~~~~~~~~~~~~~~l~~l~~l~~~l~~~g~~~~i~~d~~lvrgldYYtG~vFe~~~~~~~~~~~~~~~~~~~i~~GGRY 321 (464)
T 4g84_A 242 LQDPKLSQNKQALEGLGDLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRY 321 (464)
T ss_dssp TTCHHHHTCHHHHHHHHHHHHHHHHHHHTTCGGGEEEETTCCCCTTTCSSEEEEEEEEECC-------EEEEEEEEEEEC
T ss_pred HhcccccccHHHHHHHHHHHHHHhHHHhhCCCcceeecccccCCCcCcCCeEEEEEECCcccccccCCcccceeccCCch
Confidence 32 122345555666665 7888999889999999999999999999999987654311 11123579999999
Q ss_pred chhhhhccccccccccCCCCCCCcceecccHHHHHhhccCC---CCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHc
Q 000993 1041 DYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVD---FKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEE 1117 (1196)
Q Consensus 1041 D~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~---~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~ 1117 (1196)
|+|++.||. ++.++||||||+|+|||+.+|.+. ..+.....+++|+|++.+ +....+|++++++||++
T Consensus 322 D~L~~~~~~--------~g~~~pavGfaigieRl~~~l~~~~~~~~~~~~~~~~~v~v~~~~-~~~~~~a~~l~~~Lr~~ 392 (464)
T 4g84_A 322 DGLVGMFDP--------KGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASAQ-KKLLEERLKLVSELWDA 392 (464)
T ss_dssp CSTGGGTST--------TCCCCCEEEEEECHHHHHHHHHHHHHTTTCCCCSCCCCEEEECSS-SSCHHHHHHHHHHHHHT
T ss_pred hHHHHHhcc--------CCCCCCCccccccHHHHHHHHHHhccccCcccccccceEEEEeCC-HHHHHHHHHHHHHHHHC
Confidence 999998842 134679999999999999988632 222234567889999986 77889999999999999
Q ss_pred CCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 000993 1118 NIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1186 (1196)
Q Consensus 1118 Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~ 1186 (1196)
|++|++++...+++++++++|++.|++|+||+|++|+++|+|+||||.+|+|..|++++++++|+++++
T Consensus 393 Gi~ve~~~~~~~~l~~q~k~A~~~g~~~~viiG~~E~~~g~v~vK~l~tgeq~~v~~~elv~~lk~~l~ 461 (464)
T 4g84_A 393 GIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIKRRTG 461 (464)
T ss_dssp TCCEECCSCSSCCHHHHHHHHHHHTCCEEEECCHHHHHHTEEEEEETTTCCEEEEEGGGHHHHHHHHHT
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHCCCCEEEEECchhhhCCEEEEEECCCCCeEEeeHHHHHHHHHHHhc
Confidence 999998776567899999999999999999999999999999999999999999999999999999875
|
| >1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-61 Score=579.36 Aligned_cols=409 Identities=17% Similarity=0.230 Sum_probs=348.2
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-CcccccceEEEeecCCceEeecCCCcHHH
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPF 813 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~i 813 (1196)
+.|+|++|++|.++.++++|++.++++|++|||++|.||+| ++... |....++||+|.|++|+.++||||+|+|+
T Consensus 7 ~~~~G~~d~lP~~~~~~~~i~~~i~~~~~~~G~~ei~tP~le~~el~~~~~G~~~~~em~~~~D~~g~~l~LrPd~t~~~ 86 (434)
T 1wu7_A 7 EKIRGFRDFYPEDMDVEKFIFKTAEEAAEAFGFRRIDFPSLEYLDLYRIKSGEELLQQTYSFVDKGGREVTLIPEATPST 86 (434)
T ss_dssp CCCTTCCCBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEETHHHHTTSCTTGGGGSCEEECTTSCEEEECSCSHHHH
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCEEeeccccccHHHhhhccCCccccceEEEECCCCCEEEeCCCChHHH
Confidence 57899999999999999999999999999999999999999 34443 66778999999999999999999999999
Q ss_pred HHHHHhCCC--CceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCc-eEEEeCcH
Q 000993 814 IRWAISNQK--SSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAES-CDIHLNHG 889 (1196)
Q Consensus 814 aR~~a~~~~--~P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~-~~i~Lg~~ 889 (1196)
||++++++. .|+|+||+|+|||+|+|+.+|. ||+|+|+|+||.+++.+|+|+|.++.++|+.||++ + +.|+|||+
T Consensus 87 aR~~~~~~~~~lP~rl~~~g~vfR~erp~~gR~REF~Q~d~ei~g~~~~~ad~E~i~~~~~~l~~lgl~-~~~~i~l~~~ 165 (434)
T 1wu7_A 87 VRMVTSRKDLQRPLRWYSFPKVWRYEEPQAGRYREHYQFNADIFGSDSPEADAEVIALASSILDRLGLQ-DIYEIRINSR 165 (434)
T ss_dssp HHHHTTCTTCCSSEEEEECCEEECCCCSCSSCCSEEEEEEEEEESCCSHHHHHHHHHHHHHHHHHTTTT-TSEEEEEEEH
T ss_pred HHHHHhcCCCCCCeEEEEEcCeecCCCCCCCCccceEEeeEEEEcCCChHhhHHHHHHHHHHHHHcCCC-CceEEEECCh
Confidence 999998743 6999999999999999886655 59999999999999999999999999999999995 5 99999999
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHHH
Q 000993 890 DLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRL 969 (1196)
Q Consensus 890 ~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l 969 (1196)
+++.++++.+| +++++ .++.+++++++ ..+++++..+ ...++.+..++.+.+++ ...++..+ ++++
T Consensus 166 g~~~~~~~~~g-~~~~~-~l~~~l~~~~~---------~~~~~~~~~l-~~~~l~~~~~~~~~~~~-~~~~~~~~-l~~~ 231 (434)
T 1wu7_A 166 KIMEEIIGGMT-SSDPF-SVFSIIDRYHK---------ISREEFVDQL-RSAGIGEDGVSMIADLC-SGTRGIDE-MARI 231 (434)
T ss_dssp HHHHHHHHTTC-SSCHH-HHHHHHHTTTT---------SCHHHHHHHH-HHTTCCHHHHHHHHHHH-HSCBCHHH-HHHH
T ss_pred hhHHHHHHHhC-cHhHH-HHHHHHHHHhc---------cchHHHHHHH-HhCCCCHHHHHHHHHHH-HhCCCHHH-HHHH
Confidence 99999998676 77777 88888988773 3455654444 55889988899999988 34555444 6655
Q ss_pred hccCCCChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchhhhhc
Q 000993 970 RGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRM 1047 (1196)
Q Consensus 970 ~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~f 1047 (1196)
+ .......+.++++ ++..+|+. +|.||++++|+++||||++|++|..+ +.+.+||+|||||+|++.|
T Consensus 232 ~---~~~~~~~~~l~~~~~~l~~~g~~-~i~~D~~l~rgldYYtg~vFe~~~~~-------g~~~~v~~GGRYD~li~~f 300 (434)
T 1wu7_A 232 T---GKSSEEIARMAAVEDLLASYGVK-NVRYDFSIVRGLSYYTGIVFEAYDRS-------GQFRAILGGGRYDNLASLM 300 (434)
T ss_dssp T---TCCCHHHHHHHHHHHHHHHTTCC-CCEECTTCCTTTTTCSSEEEEEEETT-------SSCSCSSEEEECTTHHHHH
T ss_pred H---hhHHHHHHHHHHHHHHHHHcCCC-EEEECCCcccCccccCCeEEEEEECC-------CCcCeeeecccHHHHHHHh
Confidence 5 1222445556666 77888986 79999999999999999999999752 1234799999999999999
Q ss_pred cccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEEeeCC
Q 000993 1048 WDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVP 1127 (1196)
Q Consensus 1048 g~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel~~~~ 1127 (1196)
|++ +.||+|||||+|||+.+|.+..... +..+.+|+|++.+ ++...+|.+++++||++|++|++++.
T Consensus 301 gg~----------~~pa~Gf~igveRl~~~l~e~~~~~-p~~p~~v~v~~~~-~~~~~~a~~l~~~Lr~~Gi~v~~d~~- 367 (434)
T 1wu7_A 301 SGE----------SVPAVGFGMGDAVISLLLKRENVQI-PREKKSVYICRVG-KINSSIMNEYSRKLRERGMNVTVEIM- 367 (434)
T ss_dssp HSC----------CCCEEEEEEEHHHHHHHHHHTTCCC-CCSSCEEEEEEES-SCCHHHHHHHHHHHHTTTCEEEECCS-
T ss_pred CCC----------CCCeEEEEEcHHHHHHHHHhcCCcc-CCCCCcEEEEEcC-hHHHHHHHHHHHHHHHCCCeEEEecC-
Confidence 653 4699999999999999887432210 2256899999986 66789999999999999999998876
Q ss_pred CCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 000993 1128 DPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1186 (1196)
Q Consensus 1128 ~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~ 1186 (1196)
++++++++++|++.|+|++|++|++|+++|+|+||++.+|++..++++++++.+++.++
T Consensus 368 ~~~~~~~~~~a~~~g~~~~iiiG~~e~~~g~v~vk~~~~~~~~~v~~~el~~~l~~~~~ 426 (434)
T 1wu7_A 368 ERGLSAQLKYASAIGADFAVIFGERDLERGVVTIRNMYTGSQENVGLDSVVEHLISQAT 426 (434)
T ss_dssp CCCHHHHHHHHHHTTCSEEEEEEHHHHHTTEEEEEETTTCCEEEEEGGGHHHHHHHCCC
T ss_pred CCCHHHHHHHHHHCCCCEEEEECchhhhcCeEEEEECCCCCeEEEcHHHHHHHHHHHhh
Confidence 57999999999999999999999999999999999999999999999999999887654
|
| >3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-61 Score=563.69 Aligned_cols=375 Identities=16% Similarity=0.198 Sum_probs=313.7
Q ss_pred ccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccceeec----CCCcccccceEEEeecCCceEeecCCCcHH
Q 000993 737 LNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLL----GDCPQFKRNTVKLLTHGGDLLELSHELRLP 812 (1196)
Q Consensus 737 ~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~----~~~~~~~~~my~f~D~~G~~laLRPD~T~~ 812 (1196)
+-+.|+|++|++|.++.++++|++.++++|++|||++|.||+|... ..++...++||+|.|++|+.++||||+|+|
T Consensus 9 ~~~~p~G~~d~lP~~~~~~~~i~~~l~~~~~~~Gy~eI~tP~lE~~el~~~~g~~~~~~my~f~D~~g~~l~LRpd~T~~ 88 (400)
T 3od1_A 9 MFEKPFGMRDTLPEWYKTKKNICDQMTEEINLWGYDMIETPTLEYYETVGVVSAILDQQLFKLLDQQGNTLVLRPDMTAP 88 (400)
T ss_dssp TTCCCTTCCCBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEETTTHHHHSSSCGGGSCEEECTTSCEEEECSCSHHH
T ss_pred cccCCCcchhcCHHHHHHHHHHHHHHHHHHHHcCCEEEeCCccccHHHHhhcCCccccceEEEECCCCCEEEECCCCHHH
Confidence 3478899999999999999999999999999999999999999333 236677899999999999999999999999
Q ss_pred HHHHHHhC---CCCceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEeCc
Q 000993 813 FIRWAISN---QKSSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNH 888 (1196)
Q Consensus 813 iaR~~a~~---~~~P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~ 888 (1196)
+||+++++ ...|+|+||+|+|||+|+||.+|. ||+|+|+|+||.+++.+|+|||.++.++|+.+|+++ ++|+|||
T Consensus 89 ~aR~~~~~~~~~~~P~r~~y~g~vfR~e~~~~gR~Ref~Q~g~ei~G~~~~~aDaEvi~l~~~~l~~lgl~~-~~i~l~~ 167 (400)
T 3od1_A 89 IARLVASSLKDRAYPLRLAYQSNVYRAQQNEGGKPAEFEQLGVELIGDGTASADGEVIALMIAALKRAGLSE-FKVAIGH 167 (400)
T ss_dssp HHHHHHHHCSSSCSCEEEEEEEEEECCCC---CCCSEEEEEEEEEESCCSHHHHHHHHHHHHHHHHHTTCCS-EEEEEEE
T ss_pred HHHHHHhhcccCCCCeEEEEEcCEEeCCCCCCCCCCccEEeEEEEECCCChHhHHHHHHHHHHHHHHCCCCc-eEEEecC
Confidence 99999885 356999999999999999886655 699999999999999999999999999999999985 9999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHH
Q 000993 889 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 968 (1196)
Q Consensus 889 ~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 968 (1196)
+++++++++.+|++++.+++++++|+++|+ . ++ ++++.+.+++++.++.+..++ .+.|.. +++++
T Consensus 168 ~~i~~~ll~~~~~~~~~~~~l~~~l~~~~~---------~---~~-~~~l~~~~l~~~~~~~l~~l~-~~~g~~-~~l~~ 232 (400)
T 3od1_A 168 VGYVNALLMDVVGNEQRADRLRRFLYEKNY---------V---GY-REHVKSLNLSTIDKSRLMNLL-SLRGGR-AAIEE 232 (400)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHTTCH---------H---HH-HHHHHHSSSCHHHHHHHHHGG-GCEESH-HHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHhcCh---------h---HH-HHHHHhcCCCHHHHHHHHHHH-hccCCH-HHHHH
Confidence 999999999999999999999999999872 2 22 445666789999999999998 567764 58888
Q ss_pred HhccCCCChHHHHHHHHH-----HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchh
Q 000993 969 LRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1043 (1196)
Q Consensus 969 l~~~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L 1043 (1196)
+..+. .+....+++++| +++.+|+.+++.||++++||++||||+|||+|..+.+. +||+|||||+|
T Consensus 233 ~~~l~-~~~~~~~~l~~l~~l~~~L~~~gi~~~~~~D~~lvRgldYYTG~vFe~~~~~~g~--------~i~~GGRYD~L 303 (400)
T 3od1_A 233 ARGLI-QTEKGKTALAEMTKLYEVLESYGASEYVKFDLTLVLHMSYYTGVVFEGYGNRLGV--------PLCSGGRYDEL 303 (400)
T ss_dssp HHTTC-CSHHHHHHHHHHHHHHHHHHHTTCGGGEEEETTCCSCSSSCCSEEEEEEETTCSS--------EEEEEEECTTH
T ss_pred HHhhh-cChhhHHHHHHHHHHHHHHHHcCCCceEEEeCCccCCCcccCCeEEEEEECCCCC--------eeecccccchh
Confidence 88743 455666666666 78899998889999999999999999999999987543 79999999999
Q ss_pred hhhccccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEE
Q 000993 1044 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQF 1123 (1196)
Q Consensus 1044 ~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel 1123 (1196)
++.||+ ++||||||+|+|||+.+|....... ...+++|+. + ++...+|+++|++||++|++|++
T Consensus 304 ~~~fG~-----------~~pavGfaiglerL~~~l~~~~~~~---~~~~v~v~~-~-~~~~~~a~~~a~~LR~~G~~v~~ 367 (400)
T 3od1_A 304 LSKFHR-----------PAQATGFGVRIDLLVEALNGEIISN---GHEQTCILF-S-NERRFEAIELARKKRANGEAVVL 367 (400)
T ss_dssp HHHTTC-----------CCCEEEEEEEHHHHHHHHCC---------CCCEEEEE-C-GGGHHHHHHHHHHHHTTTCCEEE
T ss_pred hhccCC-----------CCCEEEEEeeHHHHHHHHHhcCCCC---CCCeEEEEE-C-cHHHHHHHHHHHHHHHCCCEEEE
Confidence 999865 2699999999999999887432211 123366654 3 56788999999999999999998
Q ss_pred eeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccC
Q 000993 1124 VPVPDPSLTEQYEYASEHDIKCLVILTDTGAQK 1156 (1196)
Q Consensus 1124 ~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~ 1156 (1196)
...... +.. ||.++|+..++++.+.+-+.
T Consensus 368 ~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~ 396 (400)
T 3od1_A 368 QDLAGV--TDV--DAMSSNYQDVIYCIGTAGRG 396 (400)
T ss_dssp EEGGGC--SCH--HHHHTTSSEEEEECSCC---
T ss_pred EecCCh--hHH--HHHHcCCCEEEEEecCCCCC
Confidence 876432 222 99999999999998876543
|
| >4e51_A Histidine--tRNA ligase; seattle structural genomics center for infectious disease, S aminoacylation, tRNA activation, charged tRNA; HET: HIS; 2.65A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-59 Score=563.71 Aligned_cols=397 Identities=17% Similarity=0.210 Sum_probs=306.5
Q ss_pred cCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-Cc---ccccceEEEeecC-CceEeecCC
Q 000993 738 NRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CP---QFKRNTVKLLTHG-GDLLELSHE 808 (1196)
Q Consensus 738 ~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~---~~~~~my~f~D~~-G~~laLRPD 808 (1196)
-+.++|++||+|.++.++++|++.++++|++|||++|.||+| ++... |+ ...++||+|.|++ |+.++||||
T Consensus 32 ~~~~~G~~d~lP~~~~~~~~l~~~i~~~~~~~Gy~eI~tP~le~~el~~~~~G~~~d~~~~~my~~~D~~~g~~l~LRPd 111 (467)
T 4e51_A 32 LTGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTPLFTRGIGEVTDIVEKEMYSFVDALNGENLTLRPE 111 (467)
T ss_dssp CCCCTTCCCBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHHHHTCTTSHHHHHTCCEEECTTTCCEEEECSC
T ss_pred CCCCCCceeeCHHHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHhhhccCCcccccccceEEEecCCCCCEEEeCcc
Confidence 467899999999999999999999999999999999999999 33222 33 3678999999999 999999999
Q ss_pred CcHHHHHHHHhCC---CCceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEE
Q 000993 809 LRLPFIRWAISNQ---KSSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDI 884 (1196)
Q Consensus 809 ~T~~iaR~~a~~~---~~P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i 884 (1196)
+|+|+||+++++. ..|+|+||+|+|||+|+|+.+|. ||+|+|+|+||.+++.+|+|+|.++.++|+.||+.+ ++|
T Consensus 112 ~t~~~ar~~~~~~~~~~lP~r~~~~g~vfR~E~~~~gR~ReF~Q~d~ei~g~~~~~adaEvi~l~~~~l~~lGl~~-~~i 190 (467)
T 4e51_A 112 NTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQFHQVGVEALGFAGPDADAEIVMMCQRLWEDLGLTG-IKL 190 (467)
T ss_dssp SHHHHHHHHHHTTTTTTSCEEEEEEEEEECCCCC---CCSEEEEEEEEEETCCCSHHHHHHHHHHHHHHHHHTCCC-EEE
T ss_pred cHHHHHHHHHHcccccCCCEEEEEEccEEccCCCCCCCcCceEEEEEEEEeCCChHHHHHHHHHHHHHHHHcCCCc-eEE
Confidence 9999999998754 35999999999999999886554 699999999999999999999999999999999986 999
Q ss_pred EeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHH----HHHHHhcC
Q 000993 885 HLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQ----TVGLRFCG 960 (1196)
Q Consensus 885 ~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~----~l~~~~~g 960 (1196)
+|||++..+.. +..++.+..++.... ..++++..+.+. .++.....
T Consensus 191 ~in~~g~~~~~-------~~~~~~l~~~l~~~~-----------------------~~l~~~~~~~l~~~~l~~ld~k~~ 240 (467)
T 4e51_A 191 EINSLGLAEER-------AAHRVELIKYLEQHA-----------------------DKLDDDAQRRLYTNPLRVLDTKNP 240 (467)
T ss_dssp EEEECCCHHHH-------HHHHHHHHHHHHTTG-----------------------GGCCHHHHHHHTTCTHHHHTCCCG
T ss_pred EEeCCCchhhh-------HHHHHHHHHHHHHHH-----------------------hccCHHHHHHHHhchHHHhhccch
Confidence 99996543211 112333333333210 112222222211 11100000
Q ss_pred ChhhHHHHHhccCC-CChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccc
Q 000993 961 AADQALPRLRGALP-ADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVG 1037 (1196)
Q Consensus 961 ~~~~~l~~l~~~~~-~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~G 1037 (1196)
...++++.+..+.. .+....+.+++| +|+.+|+. +.||++++||++||||+|||+|..+.+. +++||+|
T Consensus 241 ~~~~~l~~a~~l~~~l~~~~~~~l~~l~~~L~~~gi~--~~~d~~lvRgl~YYtg~vFe~~~~~~g~------~~tI~~G 312 (467)
T 4e51_A 241 ALQEIVRNAPKLIDFLGDVSRAHFEGLQRLLKANNVP--FTINPRLVRGLDYYNLTVFEWVTDKLGA------QGTVAAG 312 (467)
T ss_dssp GGHHHHHTSCCGGGGCCHHHHHHHHHHHHHHHHTTCC--EEECTTCCCSCTTCCSEEEEEEECC----------CEEEEE
T ss_pred hHHHHHhhhHHHHHhhhHHHHHHHHHHHHHHHHcCCe--EEEcCccccCccccCCeEEEEEECCCCC------cceecCC
Confidence 00112222211111 134456677777 78889984 9999999999999999999999986542 3589999
Q ss_pred cccchhhhhccccccccccCCCCCCCcceecccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHc
Q 000993 1038 GRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEE 1117 (1196)
Q Consensus 1038 GRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~ 1117 (1196)
||||+|++.||++ +.|||||++++|||+.+|.+..... ...+.+|+|++.+ ++...+|++++++||++
T Consensus 313 GRYD~Lv~~~g~~----------~~PavGfa~gleRl~~~l~~~~~~~-~~~p~~V~Vip~~-~~~~~~A~~ia~~LR~~ 380 (467)
T 4e51_A 313 GRYDPLIEQLGGK----------PTAACGWAMGIERILELLKEEHLVP-EQEGVDVYVVHQG-DAAREQAFIVAERLRDT 380 (467)
T ss_dssp EECTHHHHHTTSS----------CCCEEEEEEEHHHHHHHHHHTTCCC-CCCCCSEEEEECS-HHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHhCCC----------CCCceeehHHHHHHHHHHHhcCCcc-cCCCCeEEEEEcC-hHHHHHHHHHHHHHHHc
Confidence 9999999999764 4699999999999999987433221 2456899999986 66788999999999999
Q ss_pred CCeEEEeeCC---CCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCC-C------cccccchHHHHHHHHHHH
Q 000993 1118 NIKAQFVPVP---DPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDV-K------KEKEVQRESLVRFLLDAI 1185 (1196)
Q Consensus 1118 Gi~vel~~~~---~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~-g------~q~~v~~~el~~~l~~~l 1185 (1196)
|++|++++.. ++++++++++|++.|++|+|++|++|+++|+|+||||.+ + +|..++++++++.|++.+
T Consensus 381 Gi~ve~d~~~~~~~~sl~kq~~~A~~~g~~~~iiiG~~E~~~g~V~vk~~~~~~~~~~~~~q~~v~~~elv~~l~~~~ 458 (467)
T 4e51_A 381 GLDVILHCSADGAGASFKSQMKRADASGAAFAVIFGEDEVTNGTASVKPLRGTGDDGEKSVQQSVPVESLTEFLINAM 458 (467)
T ss_dssp TCCEEECCCTTSSCCCHHHHHHHHHHTTCSEEEEECHHHHHHTEEEEEEC---------CCCEEEEGGGHHHHHHHHH
T ss_pred CCeEEEEcccccccCCHHHHHHHHHHcCCCEEEEECcchhhCCeEEEEECCCCCCCCCcccceEEcHHHHHHHHHHHh
Confidence 9999987763 479999999999999999999999999999999999999 8 999999999999999887
|
| >1h4v_B Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA synthetase, ATP + L-histidine tRNA(His)-> AMP + PPI + L-histidyl-tRNA(His); 2.4A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1ady_A* 1adj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-56 Score=528.94 Aligned_cols=398 Identities=15% Similarity=0.187 Sum_probs=303.4
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-C---cccccceEEEeecCCceEeecCCCc
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-C---PQFKRNTVKLLTHGGDLLELSHELR 810 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~---~~~~~~my~f~D~~G~~laLRPD~T 810 (1196)
+.|+|++|++|.++.++++|++.++++|++|||++|.||+| ++... | +...++||+|.|++|+.++||||+|
T Consensus 4 ~~~~G~~d~lP~~~~~~~~i~~~i~~~~~~~G~~ei~tP~le~~el~~~~~G~~~d~~~~em~~~~D~~g~~l~Lrpd~t 83 (421)
T 1h4v_B 4 RAVRGTKDLFGKELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAATDIVRKEMFTFQDRGGRSLTLRPEGT 83 (421)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHHHHHHcCCEEecccccccHHHhhhccCCcccccccceEEEECCCCCEEeeCCcch
Confidence 57899999999999999999999999999999999999999 33333 3 3467899999999999999999999
Q ss_pred HHHHHHHHhCC----CCceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEE
Q 000993 811 LPFIRWAISNQ----KSSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIH 885 (1196)
Q Consensus 811 ~~iaR~~a~~~----~~P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~ 885 (1196)
+|+||+++++. ..|+|+||+|+|||+|+|+.+|. ||+|+|+|+||.+++.+|+|+|.++.++|+.+|+++ +.|+
T Consensus 84 ~~~ar~~~~~~~~~~~lP~rl~~~g~vfR~e~p~~gR~REf~Q~g~e~~g~~~~~ad~e~i~~~~~~l~~lgl~~-~~i~ 162 (421)
T 1h4v_B 84 AAMVRAYLEHGMKVWPQPVRLWMAGPMFRAERPQKGRYRQFHQVNYEALGSENPILDAEAVVLLYECLKELGLRR-LKVK 162 (421)
T ss_pred HHHHHHHHhccccccCCCeEEEEecCeecCCCCCCCCcccEEEccEEEECCCChhhhHHHHHHHHHHHHHcCCCc-eEEE
Confidence 99999998652 46999999999999999886654 699999999999999999999999999999999985 9999
Q ss_pred eCcHHHHHHHHHHcCCCHHHHHHHHHHHHHh-cCCCCCcccccccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHhcCCh
Q 000993 886 LNHGDLLEAIWSWAGIKAEHREKVAELLAMM-GSLRPQSSEWKSKWVVIRRQLLQELNLA--EAVVNRLQTVGLRFCGAA 962 (1196)
Q Consensus 886 Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~-d~~~~~~~~~k~~~~~~~~~~~~~~~l~--~~~~~~l~~l~~~~~g~~ 962 (1196)
|||++..... +..++.+..++... +.+. . +....+. ..++. ....+.+.+++..+.+
T Consensus 163 i~~~g~~~~~-------~~~~~~l~~~l~~~~~~l~------~----~~~~~l~-~~~~~~l~~~~~~~~~~~~~~~~-- 222 (421)
T 1h4v_B 163 LSSVGDPEDR-------ARYNAYLREVLSPHREALS------E----DSKERLE-ENPMRILDSKSERDQALLKELGV-- 222 (421)
T ss_pred EcCCCchhhH-------HHHHHHHHHHHHHHHhhcC------H----HHHHHHH-hcchHhhhcccHHHHHHHHhcCh--
Confidence 9996532210 01112222222211 1010 0 0101111 00000 0000011122100001
Q ss_pred hhHHHHHhccCCCChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcccccccccccccccc
Q 000993 963 DQALPRLRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRY 1040 (1196)
Q Consensus 963 ~~~l~~l~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRY 1040 (1196)
.++...+ .....+.++++ ++..+|+ .+.+|++++||++||||++|++|..+.+ ...+||+||||
T Consensus 223 ----~~l~~~l--~~~~~~~l~~~~~~l~~~g~--~i~~D~~l~rg~~YYtg~vFe~~~~~~g------~~~~v~~GGRY 288 (421)
T 1h4v_B 223 ----RPMLDFL--GEEARAHLKEVERHLERLSV--PYELEPALVRGLDYYVRTAFEVHHEEIG------AQSALGGGGRY 288 (421)
T ss_pred ----HHHHHHh--hHHHHHHHHHHHHHHHHcCC--eEEEecccccchhhhcCeEEEEEecCCC------CcCccccCCcH
Confidence 0111101 12344455555 6677786 7999999999999999999999976433 23579999999
Q ss_pred chhhhhccccccccccCCCCCCCcceecccHHHHHhhccCCC-CCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHcCC
Q 000993 1041 DYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDF-KPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENI 1119 (1196)
Q Consensus 1041 D~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~~-~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi 1119 (1196)
|+|++.||++ ..||+|||+|+|||+.+|.+.. .+.+ ..+.+|+|++.+ ++...+|.+++++||++ +
T Consensus 289 d~l~~~fgg~----------~~pa~Gf~igieRl~~~l~e~~~~~~~-~~p~~v~i~~~~-~~~~~~a~~l~~~Lr~~-i 355 (421)
T 1h4v_B 289 DGLSELLGGP----------RVPGVGFAFGVERVALALEAEGFGLPE-EKGPDLYLIPLT-EEAVAEAFYLAEALRPR-L 355 (421)
T ss_pred HHHHHHhCCC----------CCCeEEEeecHHHHHHHHHhcCcCCCC-CCCCeEEEEECC-hHHHHHHHHHHHHHHhc-C
Confidence 9999988653 4699999999999999887432 2222 367889999986 56788999999999999 9
Q ss_pred eEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHH
Q 000993 1120 KAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAI 1185 (1196)
Q Consensus 1120 ~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l 1185 (1196)
+|++++. ++++++++++|++.|+|++|++|++|+++|+|+||++.+++|..++++++++.+++.+
T Consensus 356 ~v~~d~~-~~~~~~~~~~a~~~g~p~~iivG~~e~~~~~v~vk~~~~~~~~~v~~~el~~~l~~~l 420 (421)
T 1h4v_B 356 RAEYALA-PRKPAKGLEEALKRGAAFAGFLGEDELRAGEVTLKRLATGEQVRLSREEVPGYLLQAL 420 (421)
T ss_pred EEEEecC-CCCHHHHHHHHHhCCCCEEEEECchHhhcCcEEEEECCCCCceEECHHHHHHHHHHhh
Confidence 9998876 5799999999999999999999999999999999999999999999999999987653
|
| >1htt_A Histidyl-tRNA synthetase; complex (tRNA synthetase/His-adenylate), aminoacyl-tRNA synthase, ligase; HET: HIS AMP; 2.60A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1kmm_A* 1kmn_A* 2el9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-56 Score=534.13 Aligned_cols=397 Identities=16% Similarity=0.198 Sum_probs=296.3
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-C---cccccceEEEeecCCceEeecCCCc
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-C---PQFKRNTVKLLTHGGDLLELSHELR 810 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~---~~~~~~my~f~D~~G~~laLRPD~T 810 (1196)
+.|+|++|++|.+++++++|++.++++|++|||++|.||+| ++... | +...++||+|.|++|+.++||||+|
T Consensus 5 ~~~~G~~d~lP~~~~~~~~i~~~i~~~~~~~G~~ei~tP~le~~el~~~~~G~~~d~~~~em~~~~D~~g~~l~Lrpd~t 84 (423)
T 1htt_A 5 QAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTFEDRNGDSLTLRPEGT 84 (423)
T ss_dssp CCCTTCCCBCHHHHHHHHHHHHHHHHHHHTTTCEECBCCSEEEHHHHHHHHCSSSHHHHHTCEEEECTTSCEEEECSCSH
T ss_pred CCCCCccccCHHHHHHHHHHHHHHHHHHHHcCCEEecccccCHHHHHhhccCCchhhhhhheEEEEcCCCCEEEeCCCch
Confidence 57899999999999999999999999999999999999999 23222 2 3467899999999999999999999
Q ss_pred HHHHHHHHhCC---CCceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCC-CCceEEE
Q 000993 811 LPFIRWAISNQ---KSSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFH-AESCDIH 885 (1196)
Q Consensus 811 ~~iaR~~a~~~---~~P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi-~~~~~i~ 885 (1196)
+|+||+++++. ..|+|+||+|+|||+|+|+.+|. ||+|+|+|+||.+++.+|+|+|.++.++|+.+|+ ++ +.|+
T Consensus 85 ~~~aR~~~~~~~~~~~P~rl~~~g~vfR~e~p~~gR~Ref~Q~d~e~~g~~~~~ad~e~i~~~~~~l~~lgl~~~-~~i~ 163 (423)
T 1htt_A 85 AGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEH-VTLE 163 (423)
T ss_dssp HHHHHHHHHHTCSTTCCEEEEEEEEEECCCCCCSSCCSEEEEEEEEEESCCSHHHHHHHHHHHHHHHHHHTCGGG-CEEE
T ss_pred HHHHHHHHhcccccCCCeEEEEEcCEecCCCCCCCccceeEEeeEEEECCCCchhhHHHHHHHHHHHHHCCCCCC-cEEE
Confidence 99999998653 56999999999999999887665 5999999999999999999999999999999999 75 9999
Q ss_pred eCcHHHHHHHHHHcCCCHHHHHHHHHHHHH-hcCCCCCcccccccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHhcCCh
Q 000993 886 LNHGDLLEAIWSWAGIKAEHREKVAELLAM-MGSLRPQSSEWKSKWVVIRRQLLQELNLA--EAVVNRLQTVGLRFCGAA 962 (1196)
Q Consensus 886 Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~-~d~~~~~~~~~k~~~~~~~~~~~~~~~l~--~~~~~~l~~l~~~~~g~~ 962 (1196)
|||++..+... ..+..+..++.. .+.+. ......+. ..++. +.....+.+++. +
T Consensus 164 i~~~g~~~~~~-------~~~~~l~~~l~~~~~~~~----------~~~~~~l~-~~~l~~l~~~~~~~~~~l~---~-- 220 (423)
T 1htt_A 164 LNSIGSLEARA-------NYRDALVAFLEQHKEKLD----------EDCKRRMY-TNPLRVLDSKNPEVQALLN---D-- 220 (423)
T ss_dssp EEECCCHHHHH-------HC------------------------------------------------------------
T ss_pred EcCCCChhhHH-------HHHHHHHHHHHHHHhccC----------HHHHHHHH-hchhHhhhcccHHHHHHHh---c--
Confidence 99954222110 001111111111 00000 00001110 00000 000001111110 0
Q ss_pred hhHHHHHhccCCCChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcccccccccccccccc
Q 000993 963 DQALPRLRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRY 1040 (1196)
Q Consensus 963 ~~~l~~l~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRY 1040 (1196)
..++...+ .....+.++++ ++..+|+ .+.+|++++||++||||++|++|..+.+ ...+||+||||
T Consensus 221 ---~~~l~~~l--~~~~~~~l~~~~~~l~~~g~--~i~~D~~l~rg~~YYtg~vFe~~~~~~g------~~~~v~~GGRY 287 (423)
T 1htt_A 221 ---APALGDYL--DEESREHFAGLCKLLESAGI--AYTVNQRLVRGLDYYNRTVFEWVTNSLG------SQGTVCAGGRY 287 (423)
T ss_dssp ----------C--CHHHHHHHHHHHHHHHTTTC--CCEECTTCCCSSTTCCSEEEEEECC----------CCEEEEEEEC
T ss_pred ---chHHHhhh--hHHHHHHHHHHHHHHHHcCC--eEEEccccccchHHHcCceEEEEeCCCC------CcCCcCCCccH
Confidence 01111111 23344555555 6677776 6999999999999999999999975432 23579999999
Q ss_pred chhhhhccccccccccCCCCCCCcceecccHHHHHhhccC-CCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHHc--
Q 000993 1041 DYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV-DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEE-- 1117 (1196)
Q Consensus 1041 D~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~-~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~-- 1117 (1196)
|+|++.||++ +.||||||+|+|||+.+|.+ +..+. ...+.+|+|++.+ ++...+|.+++++||++
T Consensus 288 D~l~~~fgg~----------~~pavGf~igveRl~~~l~e~~~~~~-~~~p~~v~i~~~~-~~~~~~a~~l~~~Lr~~~~ 355 (423)
T 1htt_A 288 DGLVEQLGGR----------ATPAVGFAMGLERLVLLVQAVNPEFK-ADPVVDIYLVASG-ADTQSAAMALAERLRDELP 355 (423)
T ss_dssp TTHHHHTTSC----------CCCEEEEEEEHHHHHHHHHHHSTTCC-CCCSCSEEEEECS-TTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHhCCC----------CCCeEEEEecHHHHHHHHHhcCcCCC-CCCCCcEEEEEcC-HHHHHHHHHHHHHHHcCCC
Confidence 9999998643 46999999999999998874 32222 2367799999986 56789999999999999
Q ss_pred CCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHH
Q 000993 1118 NIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAI 1185 (1196)
Q Consensus 1118 Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l 1185 (1196)
|++|++++. ++++++++++|++.|+|++|++|++|+++|+|+||++.+++|..++++++++.+++.+
T Consensus 356 Gi~v~~d~~-~~~~~~~~~~a~~~g~p~~iiiG~~e~~~~~v~vk~~~~~~~~~v~~~el~~~l~~~~ 422 (423)
T 1htt_A 356 GVKLMTNHG-GGNFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLRTLL 422 (423)
T ss_dssp TCCEEECCS-CCCHHHHHHHHHHHTCSEEEEECHHHHHHTEEEEEETTTCCEEEEEHHHHHHHHHHHH
T ss_pred CcEEEEeCC-CCCHHHHHHHHHHcCCCEEEEECchhhhcCeEEEEECCCCCceEEcHHHHHHHHHHhh
Confidence 999998876 5799999999999999999999999999999999999999999999999999987653
|
| >3rac_A Histidine-tRNA ligase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, PSI-BIO; 2.30A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-54 Score=503.22 Aligned_cols=304 Identities=19% Similarity=0.183 Sum_probs=257.1
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCCCcccc-cceEEEeecCCceEeecCCCcHHH
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQFK-RNTVKLLTHGGDLLELSHELRLPF 813 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~~~-~~my~f~D~~G~~laLRPD~T~~i 813 (1196)
+.|+|++|++|.++.++++|++.++++|++|||++|.||+| ++...++... ++||+|.|++|+.++||||+|+|+
T Consensus 24 ~~p~G~~d~lP~~~~~~~~i~~~i~~~f~~~Gy~eI~tP~le~~el~~~~g~~~~~~~my~~~D~~g~~l~LRpd~T~~~ 103 (373)
T 3rac_A 24 DRPPGMQDGYPDFAKRRRAVETRLLSFVEDAGYEPVTSGLFEYVDTLLRARSPESSRDWIRLFDGGGDAVALRPEMTPSI 103 (373)
T ss_dssp CCCTTCCCCCTTHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEHHHHHTTSCTTSCCCCCBCCCCSSSCEEECSSSHHHH
T ss_pred CCCCCccccCHHHHHHHHHHHHHHHHHHHHcCCeEEECCceeeHHHHhhcCCccchhceEEEECCCCCEEEECCcCHHHH
Confidence 67899999999999999999999999999999999999999 3334466667 899999999999999999999999
Q ss_pred HHHHHhC---CCCceeEEEecCeeecCCC------CCCC-cceeEeEEEEeCCC-CccchHHHHHHHHHHHHHcCCCCce
Q 000993 814 IRWAISN---QKSSFKRYEISSVYRRAIG------HSPP-NRYLQGDFDIIGGA-SALTEAEVLKVTMDIVTRFFHAESC 882 (1196)
Q Consensus 814 aR~~a~~---~~~P~r~~Y~G~VfR~e~~------~~~~-~ef~Q~GvEiiG~~-~~~aDaEvI~la~~~L~~lgi~~~~ 882 (1196)
||+++++ ...|+|+||+|+|||+|++ +.+| |||+|+|+|+||.+ ++.+|+|||.++.++|+.+|+++ +
T Consensus 104 aR~~~~~~~~~~~P~r~~y~g~vfR~e~~g~~~~~~~gR~ReF~Q~g~ei~g~~d~~~aDaEvi~l~~~~l~~lgl~~-~ 182 (373)
T 3rac_A 104 ARMAAPRVAAGRTPIRWCYCERVYRRTDDPASLSWASGKAAESTQVGIERIGEEASVDVDMDVLRLLHEASAAAGVRH-H 182 (373)
T ss_dssp HHHHHHHHHTTCCCCEEEEEEEEEECC------------CEEEEEEEEEECSSCCCHHHHHHHHHHHHHHHHHHTCCS-C
T ss_pred HHHHHhccccCCCCeEEEEEcceEccCCCcccccccCCccceeEEeeeEEECCCCCHHHHHHHHHHHHHHHHHcCCCc-e
Confidence 9999885 4579999999999999988 6555 46999999999999 89999999999999999999985 9
Q ss_pred EEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcC--
Q 000993 883 DIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCG-- 960 (1196)
Q Consensus 883 ~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g-- 960 (1196)
+|+|||+++++++++.+|++++++++++++|+++| +.++.++..++ +++.++.+..++ .+.|
T Consensus 183 ~i~l~~~~i~~~ll~~~g~~~~~~~~l~~~l~k~~---------~~~~~~~~~~l------~~~~~~~l~~l~-~l~g~~ 246 (373)
T 3rac_A 183 RIVVSHARLVPRLLDALGISASLSRAFLACLTSGN---------YVQFRELWQLH------AAKDVDLLANLL-TWSPAE 246 (373)
T ss_dssp EEEEEETTHHHHHHHHTTCCHHHHHHHHHHHHHTC---------HHHHHHHHHHH------CSCCSCHHHHHH-HBCCCS
T ss_pred EEEecCHHHHHHHHHHcCCCHHHHHHHHHHHHhcC---------hhhHHHHHHhc------CHHHHHHHHHHH-HHhCCc
Confidence 99999999999999999999999999999999988 44444444333 334456666777 4666
Q ss_pred ---------ChhhHHHHHhccCCCChHH----HHHHHHH-----HHHHcCC-CceEEEcCCCCCCCCCccceEEEEEecC
Q 000993 961 ---------AADQALPRLRGALPADKPT----RKALDEL-----YLRIWRI-EKNIYIDALMPPIESYHRNLFFQVFSVK 1021 (1196)
Q Consensus 961 ---------~~~~~l~~l~~~~~~~~~~----~~~l~~L-----~l~~~g~-~~~i~~Dl~lvrgl~YYTG~vFe~~~~~ 1021 (1196)
...++++++..+.. +... .+++++| +++.+|+ .+++.||++++||++||||+|||+|..+
T Consensus 247 ~~~~~~~~~~~~~~l~~~~~l~~-~~~~~~~~~~al~~l~~l~~~L~~~gi~~~~i~~D~~lvRgldYYTG~vFe~~~~~ 325 (373)
T 3rac_A 247 RDAAKRSREASDRELEALLRDAV-DPRAAADVRDAWRYLCRLAEALHDSGLASDVVTFDLALHRELDYYTGLVFEMFAPG 325 (373)
T ss_dssp SCTTSBCHHHHHHHHHHHHTTCS-CHHHHHHHHHHHHHHHHHHHHHHHHTCCTTTEEECTTCCCSCTTCCSEEEEEECTT
T ss_pred cccccccccccHHHHHHHHhhhc-CcccchhHHHHHHHHHHHHHHHHHcCCCCceEEEeCCccCCCCccCCeEEEEEECC
Confidence 14578888888544 4444 5666666 7888899 7889999999999999999999999987
Q ss_pred CCCccccccccccccccccchhhhhccccccccccCCCCCCCcceecccHHHHHhhcc
Q 000993 1022 EKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYP 1079 (1196)
Q Consensus 1022 ~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~ 1079 (1196)
.+. +||+|||||+|++.||+ ++||||||+|+|||+.+|.
T Consensus 326 ~g~--------~i~~GGRYD~L~~~fG~-----------~~pAvGFaiglerL~~~l~ 364 (373)
T 3rac_A 326 VGA--------PIAQGGRYDELLAQFGA-----------GAPAVGFAFEVERVMAVLE 364 (373)
T ss_dssp CSS--------CSEEEEECTTTTGGGTC-----------CCCCEEEEEEHHHHHHHHH
T ss_pred CCC--------eEeecccccHHHHhhCC-----------CCCeEEEEEEHHHHHHHHH
Confidence 543 79999999999998864 3699999999999999876
|
| >1qe0_A Histidyl-tRNA synthetase; class II tRNA synthetase, beta sheet, ligase; 2.70A {Staphylococcus aureus} SCOP: c.51.1.1 d.104.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-52 Score=499.11 Aligned_cols=395 Identities=16% Similarity=0.192 Sum_probs=291.6
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC----CcccccceEEEeecCCceEeecCCCc
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD----CPQFKRNTVKLLTHGGDLLELSHELR 810 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~----~~~~~~~my~f~D~~G~~laLRPD~T 810 (1196)
+.++|++|++|.++.+++.|++.++++|++|||++|.||+| ++... .+...++||+|.|++|+.++||||+|
T Consensus 3 ~~~~G~~~~~p~~~~~~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~~~g~~~~~~~~~m~~~~D~~g~~~~Lrp~~t 82 (420)
T 1qe0_A 3 KIPRGTQDILPEDSKKWRYIENQLDELMTFYNYKEIRTPIFESTDLFARGVGDSTDVVQKEMYTFKDKGDRSITLRPEGT 82 (420)
T ss_dssp CCCTTCCCBCHHHHHHHHHHHHHHHHHHHHHTCEECBCCSEEEHHHHCC-----------CCEEECHHHHCCEEECSCSH
T ss_pred CCCCcccccCHHHHHHHHHHHHHHHHHHHHcCCEEccCcccchHHHhhhccCCccchhhhheEEEEcCCCCEEEeCCCCh
Confidence 57899999999999999999999999999999999999999 23222 23567899999999999999999999
Q ss_pred HHHHHHHHhC-----CCCceeEEEecCeeecCCCCCCC-cceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEE
Q 000993 811 LPFIRWAISN-----QKSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDI 884 (1196)
Q Consensus 811 ~~iaR~~a~~-----~~~P~r~~Y~G~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i 884 (1196)
++++|+++++ ...|+|+||+|+|||+|+|+.+| +||+|+|+|+||.+++.+|+|+|.++.++|+.||+.+ ++|
T Consensus 83 ~~~~r~~~~~~~~~~~~lP~r~~~~g~vfR~E~~~~gR~reF~q~~~e~~~~~~~~~d~e~i~~~~~~l~~lgl~~-~~i 161 (420)
T 1qe0_A 83 AAVVRSYIEHKMQGNPNQPIKLYYNGPMFRYERKQKGRYRQFNQFGVEAIGAENPSVDAEVLAMVMHIYQSFGLKH-LKL 161 (420)
T ss_dssp HHHHHHHHHTTGGGCSSCSEEEEEEEEEECC-------CCEEEEEEEEEESCCCHHHHHHHHHHHHHHHHHTTCCC-EEE
T ss_pred HHHHHHHHhccccccCCCCeEEEEecCEeecCCCcCCCcccEEEeeEEEECCCCchhHHHHHHHHHHHHHHcCCCc-eEE
Confidence 9999999864 35699999999999999887655 4699999999999999999999999999999999985 999
Q ss_pred EeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHh---cC-
Q 000993 885 HLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRF---CG- 960 (1196)
Q Consensus 885 ~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~---~g- 960 (1196)
+|||.+....- +..++.+..++.... ..+++...+.+...+..+ .+
T Consensus 162 ~l~~~g~~~~~-------~~~~~~l~~~~~~~~-----------------------~~l~~~~~~~l~~~~~~~l~~~~~ 211 (420)
T 1qe0_A 162 VINSVGDMASR-------KEYNEALVKHFEPVI-----------------------HEFCSDCQSRLHTDPMRILDCKVD 211 (420)
T ss_dssp EEEECCCHHHH-------HHHHHHHHHHHGGGG-----------------------GGSCHHHHHTTTTCGGGGC-----
T ss_pred EEcccCchhhH-------HHHHHHHHHHHHHHH-----------------------hhhCHHHHHHHHhcchhhhcccch
Confidence 99995422110 011222222222210 001111111000000000 00
Q ss_pred ChhhHHHHHhccC-CCChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccc
Q 000993 961 AADQALPRLRGAL-PADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVG 1037 (1196)
Q Consensus 961 ~~~~~l~~l~~~~-~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~G 1037 (1196)
...++++.+..+. ..+....+.+++| +++.+|+ .+.+|++++|+++||||++|+++..+... .+..++|++|
T Consensus 212 ~~~~~~~~a~~l~~~l~~~~~~~l~~l~~~l~~~gi--~~~~d~~l~rg~~yYtg~vfe~~~~~~~~---~g~~~~i~~G 286 (420)
T 1qe0_A 212 RDKEAIKTAPRITDFLNEESKAYYEQVKAYLDDLGI--PYTEDPNLVRGLDYYTHTAFELMMDNPNY---DGAITTLCGG 286 (420)
T ss_dssp -------CCCCGGGCCCTTHHHHHHHHHHHHHHHTC--CCEECTTCCCCCTTEEEEEEEEEEECTTS---TTSEEEEEEE
T ss_pred hHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHcCC--eEEECcccccchhhhcCeEEEEEEcCCCC---CCCcCccccC
Confidence 0001111111110 0133455666777 7777887 58999999999999999999999875400 0123579999
Q ss_pred cccchhhhhccccccccccCCCCCCCcceecccHHHHHhhccC-CCCCCCCCCCceEEEEEcCCCchHHHHHHHHHHHHH
Q 000993 1038 GRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV-DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWE 1116 (1196)
Q Consensus 1038 GRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~-~~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~ 1116 (1196)
||||+|++.||++ .+|||||++|+|||+.+|++ +...+. .++.+|+|++.+ ++...+|.+++++||+
T Consensus 287 gRYd~l~~~~g~~----------~~P~vg~~igveRl~~~le~~~~~~p~-~~p~~v~i~~~~-~~~~~~a~~l~~~Lr~ 354 (420)
T 1qe0_A 287 GRYNGLLELLDGP----------SETGIGFALSIERLLLALEEEGIELDI-EENLDLFIVTMG-DQADRYAVKLLNHLRH 354 (420)
T ss_dssp EEEESHHHHTTCC----------CCEEEEEEEEHHHHHHHHHHTTCCCCC-CCCCSEEEEECH-HHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHhCCC----------CCCEEEEEecHHHHHHHHHhcCCCCCC-CCCCeEEEEEeC-HHHHHHHHHHHHHHHH
Confidence 9999999988653 46999999999999998863 222221 567889999885 5677899999999999
Q ss_pred cCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHH
Q 000993 1117 ENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLL 1182 (1196)
Q Consensus 1117 ~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~ 1182 (1196)
+|++|++++. ++++++++++|++.|+|++|++|++|+++|+|+||++.+++|..++++++++.|+
T Consensus 355 ~Gi~v~~d~~-~~~~~~~~~~a~~~g~p~~iiig~~e~~~~~v~vk~~~~~~~~~v~~~~l~~~l~ 419 (420)
T 1qe0_A 355 NGIKADKDYL-QRKIKGQMKQADRLGAKFTIVIGDQELENNKIDVKNMTTGESETIELDALVEYFK 419 (420)
T ss_dssp TTCCEEECCS-CCCHHHHHHHHHHTTCSEEEEECHHHHHHTCEEEEETTTCCEEEECTTHHHHHHH
T ss_pred CCCEEEEecC-CCCHHHHHHHHHHcCCCEEEEECcchhhcCeEEEEECCCCCeEEEcHHHHHHHHh
Confidence 9999998876 5799999999999999999999999999999999999999999999999998875
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-53 Score=473.60 Aligned_cols=260 Identities=26% Similarity=0.422 Sum_probs=205.0
Q ss_pred CCCCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeee
Q 000993 373 SLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFE 451 (1196)
Q Consensus 373 ~~~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e 451 (1196)
.++.+..+++|++++.||+|+||+||+|+++.+|+.||||+++..... .....++.+|+.+|+.++|||||+++++|.
T Consensus 5 ~l~~G~~ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~- 83 (275)
T 3hyh_A 5 SLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK- 83 (275)
T ss_dssp ---------CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEE-
T ss_pred CCCCCCEeeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-
Confidence 344556678999999999999999999999999999999999765432 234567999999999999999999999873
Q ss_pred cCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHH
Q 000993 452 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 452 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~g 531 (1196)
+...+|||||||+|+|.+++.+.+++++.+++.++.||+.|
T Consensus 84 ---------------------------------------~~~~~~ivmEy~~g~L~~~l~~~~~l~e~~~~~~~~qi~~a 124 (275)
T 3hyh_A 84 ---------------------------------------SKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISA 124 (275)
T ss_dssp ---------------------------------------CSSEEEEEEECCCEEHHHHHHHSCSCCHHHHHHHHHHHHHH
T ss_pred ---------------------------------------ECCEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 24678999999999999999999999999999999999999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
|+|||++||+||||||+|||++.++++||+|||+|+...... ..++.+||+.|||||++.+...
T Consensus 125 l~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~----------------~~~~~~GT~~Y~APE~~~~~~y 188 (275)
T 3hyh_A 125 VEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----------------FLKTSCGSPNYAAPEVISGKLY 188 (275)
T ss_dssp HHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC-------------------------------CTTSCHHHHSSSSC
T ss_pred HHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC----------------ccCCeeECcccCChhhhcCCCC
Confidence 999999999999999999999999999999999998653211 1245689999999999998555
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
++.++|||||||+||||++ ||......+....+......+| ...++++++||++||+.||.+|||++|+++|||
T Consensus 189 ~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p---~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw 265 (275)
T 3hyh_A 189 AGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP---KFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 265 (275)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC---TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHH
T ss_pred CCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHHHHccCChhHCcCHHHHHcCcc
Confidence 6789999999999999997 8987766655555544433333 346789999999999999999999999999999
Q ss_pred CCC
Q 000993 689 PPQ 691 (1196)
Q Consensus 689 ~~~ 691 (1196)
|+.
T Consensus 266 ~k~ 268 (275)
T 3hyh_A 266 FKV 268 (275)
T ss_dssp HHT
T ss_pred ccc
Confidence 864
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-52 Score=477.18 Aligned_cols=284 Identities=37% Similarity=0.713 Sum_probs=215.6
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
+||+++|++++.||+|+||+||+|+++.+|+.||||+++... .....+.+.+|+.+|+.++|||||+++++|.+.....
T Consensus 1 GR~l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~ 79 (299)
T 4g31_A 1 GRYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTE 79 (299)
T ss_dssp CHHHHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---
T ss_pred CCcchhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccc
Confidence 478889999999999999999999999999999999997654 3344567999999999999999999999997643110
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCC---CCHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH---FDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~---l~e~~~~~i~~qIa~gL 532 (1196)
. ........++|||||||+ |+|.+++..... .++..++.++.||+.||
T Consensus 80 ~----------------------------~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al 131 (299)
T 4g31_A 80 K----------------------------LQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAV 131 (299)
T ss_dssp -----------------------------------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHH
T ss_pred c----------------------------ccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHH
Confidence 0 000123457899999996 599999987654 45667899999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||++||+||||||+||||+.++++||+|||+|+.+........... ........++.+||+.|||||++.+ ..|
T Consensus 132 ~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~---~~~~~~~~~~~~GT~~YmAPE~~~~-~~y 207 (299)
T 4g31_A 132 EFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT---PMPAYARHTGQVGTKLYMSPEQIHG-NSY 207 (299)
T ss_dssp HHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC-----------------------------CCCTTSCHHHHTT-CCC
T ss_pred HHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCcccccccc---ccccccccCCcccCccccCHHHHcC-CCC
Confidence 999999999999999999999999999999999998754332211100 0011123456789999999999998 579
Q ss_pred CCcchhHHHHHHHHHhhcCCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 613 DEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 613 s~ksDVwSlGviLyELltPf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
+.++|||||||+||||++||....+....+..+. ....|+.+...++.+.+||++||+.||.+|||+.++++|+||+..
T Consensus 208 ~~~~DiwSlGvilyell~Pf~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 286 (299)
T 4g31_A 208 SHKVDIFSLGLILFELLYPFSTQMERVRTLTDVR-NLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDL 286 (299)
T ss_dssp CTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHH-TTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC
T ss_pred CCHHHHHHHHHHHHHHccCCCCccHHHHHHHHHh-cCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCC
Confidence 9999999999999999999987665444443333 556677777778889999999999999999999999999999987
Q ss_pred hH
Q 000993 693 EY 694 (1196)
Q Consensus 693 ~~ 694 (1196)
.+
T Consensus 287 ~~ 288 (299)
T 4g31_A 287 DF 288 (299)
T ss_dssp --
T ss_pred CC
Confidence 54
|
| >1z7m_A ATP phosphoribosyltransferase regulatory subunit; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: d.104.1.1 PDB: 1z7n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-53 Score=486.12 Aligned_cols=298 Identities=16% Similarity=0.247 Sum_probs=253.8
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec----CCCcccccceEEEeecCCceEeecCCCc
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL----GDCPQFKRNTVKLLTHGGDLLELSHELR 810 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~----~~~~~~~~~my~f~D~~G~~laLRPD~T 810 (1196)
+.|+|++|++|.++..+++|++.++++|++|||++|.||+| ++. +.++...++||+|.|++|+.++||||+|
T Consensus 23 ~~~~G~~d~lP~~~~~~~~i~~~i~~~~~~~Gy~eI~tP~le~~el~~~s~~g~~~~~~~~my~~~D~~g~~l~LRpd~T 102 (344)
T 1z7m_A 23 LLPEESAEMTLNQVKSLRQIEGRLRKLFSLKNYQEVMPPSFEYTQLYTALESNGKTFNQEKMFQFIKHEGQSITLRYDFT 102 (344)
T ss_dssp CCCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEHHHHHHHHCSSSCCCTTSCCEEECTTCCEEEECCCSH
T ss_pred CCCCCcccCCHHHHHHHHHHHHHHHHHHHHcCCEEecCcccCcHHHHhhccCCccccccccEEEEECCCCCEEecCCCCc
Confidence 67899999999999999999999999999999999999999 332 3466788999999999999999999999
Q ss_pred HHHHHHHHhCC-CCceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEeCc
Q 000993 811 LPFIRWAISNQ-KSSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNH 888 (1196)
Q Consensus 811 ~~iaR~~a~~~-~~P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~ 888 (1196)
+|+||+++++. ..|+|+||+|+|||+|+|+.+|. ||+|+|+|+||.+++.+|+|+|.++.++|+.+|+++ ++|+|||
T Consensus 103 ~~~aR~~~~~~~~~P~rl~y~g~vfR~e~p~~gR~REF~Q~g~ei~g~~~~~aDaEvi~l~~~~l~~lgl~~-~~i~l~~ 181 (344)
T 1z7m_A 103 LPLVRLYSQIKDSTSARYSYFGKIFRKEKRHKGRSTENYQIGIELFGESADKSELEILSLALQVIEQLGLNK-TVFEIGS 181 (344)
T ss_dssp HHHHHHHHTCCSCCCEEEEEEEECCCCCC-------CCEEEEEEEESSCHHHHHHHHHHHHHHHHHHHTCSS-EEEEEEE
T ss_pred HHHHHHHHhcCCCCCeEEEEECcEEccCCCCCCCcceeEEEEEEEEcCCCcHHHHHHHHHHHHHHHHCCCCc-EEEEECC
Confidence 99999999874 46999999999999999886655 699999999999999999999999999999999986 9999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHH
Q 000993 889 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 968 (1196)
Q Consensus 889 ~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 968 (1196)
++++++++ |++++.+.+++++|+++++ . ++ ++++.+.+++++.++.+..++ .+ |+. +++++
T Consensus 182 ~gi~~~~l---g~~~~~~~~l~~~l~~~~~---------~---~~-~~~l~~~~l~~~~~~~l~~l~-~~-g~~-~~l~~ 242 (344)
T 1z7m_A 182 AKFFQRLC---QLADGSTELLTELLLKKDL---------S---GL-NAFIEKNNFSKELRGLLKEIF-IT-NEL-SRLEN 242 (344)
T ss_dssp HHHHHHHH---HHTTTCHHHHHHHHHTTCH---------H---HH-HHHHTTSCCCHHHHHHHHHHT-TC-CCH-HHHHH
T ss_pred HHHHHHHh---CCCHHHHHHHHHHHHhhCH---------H---HH-HHHHHhcCCCHHHHHHHHHHH-hc-CCH-HHHHH
Confidence 99999988 6777778889999998873 2 22 445556789999999999998 46 764 78888
Q ss_pred HhccCCCChHHHHHHHHH-----HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchh
Q 000993 969 LRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1043 (1196)
Q Consensus 969 l~~~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L 1043 (1196)
+..+.. +....+++++| +++.+| ++.||++++||++||||+|||+|..+.+ .+||+|||||+|
T Consensus 243 ~~~l~~-~~~~~~~l~~l~~l~~~L~~~g---~~~~D~~lvrgldYYtG~vFe~~~~~~~--------~~i~~GGRYD~L 310 (344)
T 1z7m_A 243 LVTNTK-DDVLISSFDQLKEFSEKLSMIK---PIIIDLGMVPKMDYYTDLMFKAYSSAAN--------QPILSGGRYDQL 310 (344)
T ss_dssp HHHHTT-CHHHHHHHHHHHHHHHHHTTTS---CCEECTTCCCSSTTCCSEEEEEEETTEE--------EEEEEEEECHHH
T ss_pred HHHhhc-chhhHHHHHHHHHHHHHHhhCC---CEEEeCCCCCCCccCCCeEEEEEECCCC--------CeEeeCccHHHH
Confidence 887543 45566666666 555556 7999999999999999999999987543 379999999999
Q ss_pred hhhccccccccccCCCCCCCcceecccHHHHHhhcc
Q 000993 1044 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYP 1079 (1196)
Q Consensus 1044 ~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~ 1079 (1196)
++.|| + ++||||||+|+|||+.+|.
T Consensus 311 ~~~fg-~----------~~pavGfaiglerl~~~l~ 335 (344)
T 1z7m_A 311 LSNFQ-E----------EAFAIGFCCHMDTILKALE 335 (344)
T ss_dssp HHTSS-S----------CCCCEEEEEEHHHHHHHHH
T ss_pred HHHhC-C----------CCCeEEEEEEHHHHHHHHH
Confidence 99886 2 4799999999999998876
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-53 Score=479.72 Aligned_cols=263 Identities=29% Similarity=0.464 Sum_probs=226.0
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
...++|++++.||+|+||+||+|+++.+|+.||||+++.... .....+.+.+|+.+|+.++|||||+++++|.
T Consensus 29 ~~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~------ 102 (311)
T 4aw0_A 29 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ------ 102 (311)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE------
T ss_pred CCccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE------
Confidence 345789999999999999999999999999999999975321 1223567999999999999999999999883
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
+..++|||||||+ |+|.+++.+.+.+++.+++.++.||+.||+||
T Consensus 103 ----------------------------------~~~~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~yl 148 (311)
T 4aw0_A 103 ----------------------------------DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148 (311)
T ss_dssp ----------------------------------CSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------eCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 3567899999997 59999999999999999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+||||+.++++||+|||+|+.+..... .....+.+||+.|||||++.+ ..|+.+
T Consensus 149 H~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~-------------~~~~~~~~GTp~YmAPEvl~~-~~y~~~ 214 (311)
T 4aw0_A 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-------------QARANSFVGTAQYVSPELLTE-KSACKS 214 (311)
T ss_dssp HHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT-------------CCCBCCCCSCGGGCCHHHHHH-SCBCHH
T ss_pred HHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC-------------cccccCcccCcccCCHHHHcC-CCCCcH
Confidence 999999999999999999999999999999987532210 112356799999999999998 569999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHH------HHhc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE------LLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~e------iL~~ 686 (1196)
+|||||||+||||++ ||......+....+......+|. ..++++++||++||+.||.+|||++| |++|
T Consensus 215 ~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~---~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~H 291 (311)
T 4aw0_A 215 SDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPE---KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAH 291 (311)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT---TCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTS
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc---ccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCC
Confidence 999999999999996 99887777777666665555553 46789999999999999999999887 6899
Q ss_pred cCCCCchHHHH
Q 000993 687 ALPPQMEYELL 697 (1196)
Q Consensus 687 ~~~~~~~~~~~ 697 (1196)
|||.++.|+.+
T Consensus 292 p~F~~idw~~l 302 (311)
T 4aw0_A 292 PFFESVTWENL 302 (311)
T ss_dssp GGGTTCCCTTG
T ss_pred CCcCCCCHHHh
Confidence 99999877643
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-51 Score=465.92 Aligned_cols=254 Identities=24% Similarity=0.382 Sum_probs=214.5
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCc
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 462 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~ 462 (1196)
|++.++||+|+||+||+|+++.++..||||++..........+.+.+|+.+|+.++|||||+++++|....
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~--------- 98 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV--------- 98 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEE---------
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeecc---------
Confidence 46778899999999999999999999999999876666666778999999999999999999999984321
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC--
Q 000993 463 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG-- 539 (1196)
Q Consensus 463 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g-- 539 (1196)
.....+|||||||+ |+|.+++.+...+++..++.++.||+.||+|||++|
T Consensus 99 ---------------------------~~~~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~ 151 (290)
T 3fpq_A 99 ---------------------------KGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPP 151 (290)
T ss_dssp ---------------------------TTEEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSC
T ss_pred ---------------------------CCCcEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 12467899999997 599999999999999999999999999999999998
Q ss_pred CcccCCCcCcEEecC-CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 540 IIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 540 IiHrDLKp~NILld~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||||||||+||||+. ++++||+|||+|+..... ..++.+||+.|||||++.+ .|+.++||
T Consensus 152 IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~-----------------~~~~~~GTp~YmAPE~~~~--~y~~~~Di 212 (290)
T 3fpq_A 152 IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-----------------FAKAVIGTPEFMAPEMYEE--KYDESVDV 212 (290)
T ss_dssp CCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT-----------------SBEESCSSCCCCCGGGGGT--CCCTHHHH
T ss_pred EEecccChhheeEECCCCCEEEEeCcCCEeCCCC-----------------ccCCcccCccccCHHHcCC--CCCcHHHH
Confidence 999999999999985 799999999999753211 1245689999999999976 59999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
|||||+||||+| ||............+......+......++++++||.+||+.||.+|||+.++|+||||++
T Consensus 213 wSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 213 YAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp HHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred HHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence 999999999997 8876555554444444332222334456789999999999999999999999999999975
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-52 Score=482.31 Aligned_cols=255 Identities=31% Similarity=0.591 Sum_probs=216.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|+++++||+|+||+||+|+++.+|+.||||+++.........+.+.+|+.+|+.++|||||+++++|.+
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~-------- 94 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEE-------- 94 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--------
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEE--------
Confidence 589999999999999999999999999999999998776666667889999999999999999999998843
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|||||||+ |+|.+++... ..+++.+++.|+.||+.||+|||
T Consensus 95 --------------------------------~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH 142 (350)
T 4b9d_A 95 --------------------------------NGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH 142 (350)
T ss_dssp --------------------------------TTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 457899999997 5999999754 35799999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++|||||||||+||||+.++++||+|||+|+.+.... ...++.+||+.|||||++.+ ..|+.++
T Consensus 143 ~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~---------------~~~~~~~GT~~YmAPE~l~~-~~y~~~~ 206 (350)
T 4b9d_A 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV---------------ELARACIGTPYYLSPEICEN-KPYNNKS 206 (350)
T ss_dssp HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH---------------HHHHHHHSCCTTCCHHHHTT-CCCCHHH
T ss_pred HCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc---------------ccccccCCCccccCHHHHCC-CCCCcHH
Confidence 9999999999999999999999999999998754221 01235689999999999998 5699999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|||||||+||||++ ||......+....+.. ...|+.+...++++++||.+||+.||.+|||++++|+|+|+.+.
T Consensus 207 DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~--~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 207 DIWALGCVLYELCTLKHAFEAGSMKNLVLKIIS--GSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH--TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred HHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHc--CCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence 99999999999997 9988777666665554 34455566778899999999999999999999999999998653
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-52 Score=476.65 Aligned_cols=253 Identities=23% Similarity=0.417 Sum_probs=217.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
..|+++++||+|+||+||+|+++.+|+.||||+++..... ..+.+.+|+.+|+.++|||||+++++|.+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~Ei~il~~l~HpnIV~l~~~~~~--------- 142 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHENVVEMYNSYLV--------- 142 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS--SGGGGHHHHHHHHHCCCTTBCCEEEEEEE---------
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh--HHHHHHHHHHHHHhCCCCCCCcEEEEEEE---------
Confidence 5799999999999999999999999999999999865433 23568899999999999999999999843
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+|||||||+| +|.+++.. .++++.+++.++.||+.||+|||++|
T Consensus 143 -------------------------------~~~~~ivmEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~ 190 (346)
T 4fih_A 143 -------------------------------GDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQG 190 (346)
T ss_dssp -------------------------------TTEEEEEECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -------------------------------CCEEEEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4578999999975 89998865 57999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
||||||||+||||+.++++||+|||+|+.+.... ...++.+||+.|||||++.+ ..|+.++|||
T Consensus 191 IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~---------------~~~~~~~GTp~YmAPEvl~~-~~y~~~~DiW 254 (346)
T 4fih_A 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---------------PRRKSLVGTPYWMAPELISR-LPYGPEVDIW 254 (346)
T ss_dssp EECCCCSGGGEEECTTCCEEECCCTTCEECCSSS---------------CCBCCCCSCGGGCCHHHHTT-CCBCTHHHHH
T ss_pred cccccCCHHHEEECCCCCEEEecCcCceecCCCC---------------CcccccccCcCcCCHHHHCC-CCCCcHHHHH
Confidence 9999999999999999999999999998653221 12346799999999999987 5699999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||||+||||++ ||......+....+........+.+...++++++||.+||+.||.+|||++|+|+||||.+.
T Consensus 255 SlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~ 330 (346)
T 4fih_A 255 SLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 330 (346)
T ss_dssp HHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCC
Confidence 99999999997 88877666655544443333445667788999999999999999999999999999999754
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-51 Score=468.06 Aligned_cols=258 Identities=28% Similarity=0.422 Sum_probs=214.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
++|++++.||+|+||+||+|++. .+++.||||+++..........++.+|+.+|+.++|||||+++++|.+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~------ 97 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT------ 97 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEE------
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE------
Confidence 68999999999999999999984 468899999997543333333468899999999999999999998832
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|||||||+ |+|.+++.+.+.+++.+++.++.||+.||+|||
T Consensus 98 ----------------------------------~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH 143 (304)
T 3ubd_A 98 ----------------------------------EGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143 (304)
T ss_dssp ----------------------------------TTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 467899999997 599999999999999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++++||+|||+|+...... ....+.+||+.|||||++.+ ..|+.++
T Consensus 144 ~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~---------------~~~~~~~GT~~YmAPE~~~~-~~y~~~~ 207 (304)
T 3ubd_A 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE---------------KKAYSFCGTVEYMAPEVVNR-RGHTQSA 207 (304)
T ss_dssp HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC--------------------CCCCSCCCCGGGCCHHHHHT-SCCCTHH
T ss_pred HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCC---------------ccccccccCcccCCHHHhcc-CCCCCCC
Confidence 9999999999999999999999999999998643211 12345789999999999998 5799999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhccC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDAL 688 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~~~ 688 (1196)
|||||||+||||++ ||......+....+......+| ...++++++||++||+.||.+||| ++++++|||
T Consensus 208 DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p---~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~ 284 (304)
T 3ubd_A 208 DWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP---QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSF 284 (304)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGG
T ss_pred cccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCC---CcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCcc
Confidence 99999999999997 9988777776666665444444 346789999999999999999998 589999999
Q ss_pred CCCchHHHH
Q 000993 689 PPQMEYELL 697 (1196)
Q Consensus 689 ~~~~~~~~~ 697 (1196)
|..+.|+.+
T Consensus 285 f~~idw~~l 293 (304)
T 3ubd_A 285 FSTIDWNKL 293 (304)
T ss_dssp GTTCCHHHH
T ss_pred ccCCCHHHH
Confidence 999987644
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-50 Score=477.72 Aligned_cols=253 Identities=23% Similarity=0.417 Sum_probs=217.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
+.|+++++||+|+||+||+|+++.+|+.||||+++..... ..+.+.+|+.+|+.++|||||+++++|.+
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~Ei~il~~l~HpnIV~l~~~~~~--------- 219 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHENVVEMYNSYLV--------- 219 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS--SGGGHHHHHHHHHHCCCTTBCCEEEEEEE---------
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh--HHHHHHHHHHHHHhCCCCCCCceEEEEEE---------
Confidence 5799999999999999999999999999999999865433 23568899999999999999999999843
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+|||||||+| +|.+++.. .++++.+++.++.||+.||+|||++|
T Consensus 220 -------------------------------~~~~~iVmEy~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~ 267 (423)
T 4fie_A 220 -------------------------------GDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQG 267 (423)
T ss_dssp -------------------------------TTEEEEEEECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -------------------------------CCEEEEEEeCCCCCcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4578999999974 89998864 56999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
||||||||+||||+.+|++||+|||+|+.+.... ...++.+||+.|||||++.+ ..|+.++|||
T Consensus 268 IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~---------------~~~~~~~GTp~YmAPEvl~~-~~y~~~~DiW 331 (423)
T 4fie_A 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---------------PRRKSLVGTPYWMAPELISR-LPYGPEVDIW 331 (423)
T ss_dssp EECCCCSTTTEEECTTCCEEECCCTTCEECCSSC---------------CCBCCCEECTTTCCHHHHTT-CCBCTHHHHH
T ss_pred eecccCCHHHEEEcCCCCEEEecCccceECCCCC---------------ccccccccCcCcCCHHHHCC-CCCCcHHHHH
Confidence 9999999999999999999999999998653221 12356799999999999988 5799999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||||+||||++ ||......+....+........+.+...++++++||++||+.||.+|||+.|+|+|+||.+.
T Consensus 332 SlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~ 407 (423)
T 4fie_A 332 SLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 407 (423)
T ss_dssp HHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCC
Confidence 99999999997 88877666655544433333344566788999999999999999999999999999999753
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-49 Score=469.83 Aligned_cols=267 Identities=25% Similarity=0.390 Sum_probs=221.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++++.||+|+||+||+|+++.+|+.||||+++..........++.+|+.+|+.++|||||++++++....
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------- 126 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTV------- 126 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSS-------
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeeccc-------
Confidence 5799999999999999999999999999999999766555556678999999999999999999999874321
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
...+...+|||||||+|+|.+++...+++++.+++.++.||+.||+|||++||
T Consensus 127 ---------------------------~~~~~~~~~ivmE~~~g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~i 179 (398)
T 4b99_A 127 ---------------------------PYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQV 179 (398)
T ss_dssp ---------------------------CTTTCCCEEEEEECCSEEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ---------------------------ccccCCEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcC
Confidence 01234678999999999999999999999999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
|||||||+|||++.++.+||+|||+|+.+...... .....++.+||+.|||||++.+...|+.++||||
T Consensus 180 iHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~-----------~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWS 248 (398)
T 4b99_A 180 IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAE-----------HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWS 248 (398)
T ss_dssp BCCCCCGGGEEECTTCCEEECCCTTCBCC------------------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHH
T ss_pred cCCCcCccccccCCCCCEEEeecceeeecccCccc-----------cccccccceeChHhcCHHHhcCCCCCCChhheeh
Confidence 99999999999999999999999999865322111 0112356799999999999988667899999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC------------------------c----cccCCHHHHHHHHHc
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP------------------------S----WVAKFSEQESLLRRL 669 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~------------------------~----~~~~~~~l~~LI~~c 669 (1196)
+|||+|||++ ||.+....+....+....+..+. . +...++++.+||++|
T Consensus 249 lG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~m 328 (398)
T 4b99_A 249 VGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRM 328 (398)
T ss_dssp HHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHH
T ss_pred hHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHH
Confidence 9999999996 88776665555444332222111 1 124567899999999
Q ss_pred ccCCCCCCCCHHHHHhccCCCCc
Q 000993 670 MSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 670 L~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|..||.+|||+.++|+||||.+.
T Consensus 329 L~~dP~~R~ta~e~L~Hp~f~~~ 351 (398)
T 4b99_A 329 LRFEPSARISAAAALRHPFLAKY 351 (398)
T ss_dssp SCSSTTTSCCHHHHTTSGGGTTT
T ss_pred CcCChhHCcCHHHHhcCHhhCcC
Confidence 99999999999999999999864
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-50 Score=464.19 Aligned_cols=249 Identities=24% Similarity=0.337 Sum_probs=205.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.+.|++.++||+|+||+||+|+++.+|+.||||+++.... ..+|+.+|+.++|||||+++++|.+
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~-------- 121 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVRE-------- 121 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEE--------
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEE--------
Confidence 4679999999999999999999999999999999985432 2469999999999999999998843
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|||||||+ |+|.+++.+.+.+++.+++.++.||+.||+|||++
T Consensus 122 --------------------------------~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~ 169 (336)
T 4g3f_A 122 --------------------------------GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR 169 (336)
T ss_dssp --------------------------------TTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred --------------------------------CCEEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 457899999997 59999999999999999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCC-CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 539 GIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
|||||||||+||||+.++ ++||+|||+|+.+....... ........+||+.|||||++.+ ..|+.++|
T Consensus 170 ~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~----------~~~~~~~~~GT~~YmAPE~~~~-~~y~~~~D 238 (336)
T 4g3f_A 170 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK----------SLLTGDYIPGTETHMAPEVVMG-KPCDAKVD 238 (336)
T ss_dssp TEECSCCCGGGEEECTTSCCEEECCCTTCEEC----------------------CCCCCCGGGCCHHHHTT-CCCCTHHH
T ss_pred CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc----------ceecCCccccCccccCHHHHCC-CCCCcHHH
Confidence 999999999999999987 69999999998764322111 0112345689999999999998 57999999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||||||+||||++ ||......+....+.......+..+...++.+.+||.+||+.||.+|||+.|+++|
T Consensus 239 iwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~ 310 (336)
T 4g3f_A 239 IWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRK 310 (336)
T ss_dssp HHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 9999999999996 88766554444444443322223345677899999999999999999999999754
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-48 Score=441.05 Aligned_cols=250 Identities=24% Similarity=0.354 Sum_probs=203.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|.+.++||+|+||+||+|+++ ..||||+++....+....+.|.+|+.+|++++|||||++++++.+
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-------- 103 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-------- 103 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--------
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC--------
Confidence 368899999999999999999875 359999998766666677889999999999999999999997621
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
..+|||||||+ |+|.+++... .++++.++..++.||+.||+|||+
T Consensus 104 ---------------------------------~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~ 150 (307)
T 3omv_A 104 ---------------------------------DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA 150 (307)
T ss_dssp ---------------------------------SSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 23689999997 6999999754 579999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC--CCCCCc
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PKIDEK 615 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~~s~k 615 (1196)
++||||||||+||||+.++++||+|||+|+....... ....+..+||+.|||||++.+. ..|+.+
T Consensus 151 ~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~-------------~~~~~~~~GT~~ymAPE~l~~~~~~~y~~k 217 (307)
T 3omv_A 151 KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG-------------SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQ 217 (307)
T ss_dssp TTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------------------------CCCCTTSCCHHHHHCCSSCCCCHH
T ss_pred CCccCCccCHHHEEECCCCcEEEeeccCceecccCCc-------------ceeecccccCCCccCHHHhhccCCCCCCcH
Confidence 9999999999999999999999999999986532210 1123456899999999999752 358999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC---CCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL---PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~---p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||||||+||||+| ||............+...... +..+..+++++.+||.+||+.||.+|||+.+|+++
T Consensus 218 sDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~ 294 (307)
T 3omv_A 218 SDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSS 294 (307)
T ss_dssp HHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred HHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 999999999999997 887665554444444333222 23345677899999999999999999999998754
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-48 Score=437.97 Aligned_cols=247 Identities=23% Similarity=0.353 Sum_probs=205.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
++|.+.++||+|+||+||+|++. .++..||||+++. .+....++|.+|+.+|++++|||||+++++|.+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~--~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~---- 86 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD--ASDNARKDFHREAELLTNLQHEHIVKFYGVCVE---- 86 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECS--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS----
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCC--CChHHHHHHHHHHHHHHhCCCCCCccEEEEEee----
Confidence 68999999999999999999975 3588999999864 344556789999999999999999999999843
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-------------CCCCHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------------DHFDKELA 521 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------------~~l~e~~~ 521 (1196)
...+|||||||+ |+|.++|... ..+++.++
T Consensus 87 ------------------------------------~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~ 130 (299)
T 4asz_A 87 ------------------------------------GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQM 130 (299)
T ss_dssp ------------------------------------SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHH
T ss_pred ------------------------------------CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHH
Confidence 346799999996 6999999754 35999999
Q ss_pred HHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCC
Q 000993 522 WHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYT 601 (1196)
Q Consensus 522 ~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 601 (1196)
+.++.||++||+|||+++|+||||||+||||+.++++||+|||+|+....... .......+||+.||
T Consensus 131 ~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~-------------~~~~~~~~gt~~ym 197 (299)
T 4asz_A 131 LHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDY-------------YRVGGHTMLPIRWM 197 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGC-------------EEETTTEEECGGGC
T ss_pred HHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccceecCCCCc-------------eeecCceecChhhc
Confidence 99999999999999999999999999999999999999999999987543221 11123457999999
Q ss_pred CchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCC
Q 000993 602 APEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 677 (1196)
Q Consensus 602 APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~R 677 (1196)
|||++.+ ..|+.++|||||||+||||+| ||......+....... +..++.+..+++++.+||.+||+.||++|
T Consensus 198 APE~~~~-~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~--~~~~~~p~~~~~~~~~li~~cl~~dP~~R 274 (299)
T 4asz_A 198 PPESIMY-RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ--GRVLQRPRTCPQEVYELMLGCWQREPHMR 274 (299)
T ss_dssp CHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHH--TCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred CHHHHcC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc--CCCCCCCccchHHHHHHHHHHcCCChhHC
Confidence 9999998 579999999999999999986 8887766665544433 33344445677899999999999999999
Q ss_pred CCHHHHHh
Q 000993 678 PSATELLQ 685 (1196)
Q Consensus 678 Pta~eiL~ 685 (1196)
||+.+|++
T Consensus 275 Ps~~~i~~ 282 (299)
T 4asz_A 275 KNIKGIHT 282 (299)
T ss_dssp CCHHHHHH
T ss_pred cCHHHHHH
Confidence 99999964
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-47 Score=436.93 Aligned_cols=250 Identities=21% Similarity=0.281 Sum_probs=207.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
..+++++++||+|+||+||+|++. .+++.||||+++... .....++|.+|+.+|++++|||||+++++|.+
T Consensus 25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~--- 100 (308)
T 4gt4_A 25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTK--- 100 (308)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE---
Confidence 467889999999999999999974 357899999986432 33446789999999999999999999999843
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------------CCCC
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DHFD 517 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~l~ 517 (1196)
...+|||||||+ |+|.++|... ..++
T Consensus 101 -------------------------------------~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~ 143 (308)
T 4gt4_A 101 -------------------------------------DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE 143 (308)
T ss_dssp -------------------------------------SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCC
T ss_pred -------------------------------------CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCC
Confidence 345699999996 6999999643 3589
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcccc
Q 000993 518 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 597 (1196)
Q Consensus 518 e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT 597 (1196)
+.++..++.||++||+|||+++||||||||+||||++++++||+|||+|+.+...... ...+..+||
T Consensus 144 ~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~-------------~~~~~~~gt 210 (308)
T 4gt4_A 144 PPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYY-------------KLLGNSLLP 210 (308)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCB-------------CSSSSSCBC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccceeccCCCce-------------eEecccccC
Confidence 9999999999999999999999999999999999999999999999999876432211 123456899
Q ss_pred ccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCC
Q 000993 598 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 673 (1196)
Q Consensus 598 ~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~d 673 (1196)
+.|||||++.+ ..|+.++|||||||+||||+| ||......+....+. .+..++.+..+++++.+||.+||+.|
T Consensus 211 ~~ymAPE~l~~-~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~--~~~~~~~p~~~~~~~~~li~~C~~~d 287 (308)
T 4gt4_A 211 IRWMAPEAIMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR--NRQVLPCPDDCPAWVYALMIECWNEF 287 (308)
T ss_dssp GGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred CcccCHHHHhC-CCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH--cCCCCCCcccchHHHHHHHHHHcCCC
Confidence 99999999988 579999999999999999986 888776665544333 34444555567889999999999999
Q ss_pred CCCCCCHHHHHhc
Q 000993 674 PSDRPSATELLQD 686 (1196)
Q Consensus 674 P~~RPta~eiL~~ 686 (1196)
|.+|||+.+|+++
T Consensus 288 P~~RPs~~ei~~~ 300 (308)
T 4gt4_A 288 PSRRPRFKDIHSR 300 (308)
T ss_dssp GGGSCCHHHHHHH
T ss_pred hhHCcCHHHHHHH
Confidence 9999999999875
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-47 Score=438.01 Aligned_cols=249 Identities=24% Similarity=0.334 Sum_probs=200.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.++|.+.++||+|+||+||+|+++ .+++.||||+++. .+....++|.+|+.+|++++|||||+++++|.+
T Consensus 40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~--~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--- 114 (329)
T 4aoj_A 40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE--ASESARQDFQREAELLTMLQHQHIVRFFGVCTE--- 114 (329)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESC--CSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---
T ss_pred HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECc--CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE---
Confidence 368999999999999999999975 3688999999863 344556789999999999999999999999843
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc---------------CCCCH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY---------------DHFDK 518 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~---------------~~l~e 518 (1196)
...+|||||||+ |+|.++++.. .++++
T Consensus 115 -------------------------------------~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~ 157 (329)
T 4aoj_A 115 -------------------------------------GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 157 (329)
T ss_dssp -------------------------------------SSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCH
T ss_pred -------------------------------------CCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCH
Confidence 345799999997 6999999753 35899
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccc
Q 000993 519 ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTY 598 (1196)
Q Consensus 519 ~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~ 598 (1196)
.+++.++.||++||+|||+++||||||||+||||+.++++||+|||+|+....... ....+..+||+
T Consensus 158 ~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~-------------~~~~~~~~gt~ 224 (329)
T 4aoj_A 158 GQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY-------------YRVGGRTMLPI 224 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-----------------------------CCCCG
T ss_pred HHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccceeccCCCc-------------ceecCcccccc
Confidence 99999999999999999999999999999999999999999999999986532211 11224468999
Q ss_pred cCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCC
Q 000993 599 FYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 674 (1196)
Q Consensus 599 ~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP 674 (1196)
.|||||++.+ ..|+.++|||||||+||||+| ||......+....+.. +..++.+..+++++.+||.+||+.||
T Consensus 225 ~ymAPE~~~~-~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~--g~~~~~p~~~~~~~~~li~~cl~~dP 301 (329)
T 4aoj_A 225 RWMPPESILY-RKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ--GRELERPRACPPEVYAIMRGCWQREP 301 (329)
T ss_dssp GGCCHHHHTT-CCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHH--TCCCCCCTTCCHHHHHHHHHHCCSST
T ss_pred cccChhhhcC-CCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHc--CCCCCCcccccHHHHHHHHHHcCcCh
Confidence 9999999998 679999999999999999986 8887766655544433 23344445677899999999999999
Q ss_pred CCCCCHHHHHhc
Q 000993 675 SDRPSATELLQD 686 (1196)
Q Consensus 675 ~~RPta~eiL~~ 686 (1196)
++|||+.+|+++
T Consensus 302 ~~RPs~~ei~~~ 313 (329)
T 4aoj_A 302 QQRHSIKDVHAR 313 (329)
T ss_dssp TTSCCHHHHHHH
T ss_pred hHCcCHHHHHHH
Confidence 999999999875
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-47 Score=467.55 Aligned_cols=259 Identities=27% Similarity=0.381 Sum_probs=215.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC----CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD----KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~----~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.+++|+++++||+|+||+||+|+++.+|+.||||+++... ..........+++.+++.++|||||+++++|.
T Consensus 187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~---- 262 (689)
T 3v5w_A 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH---- 262 (689)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEE----
T ss_pred chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEE----
Confidence 4689999999999999999999999999999999997532 11112222334466777889999999999883
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
+..++|||||||+ |+|.+++.+.+.+++..++.|+.||+.||+
T Consensus 263 ------------------------------------~~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~ 306 (689)
T 3v5w_A 263 ------------------------------------TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 306 (689)
T ss_dssp ------------------------------------CSSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------ECCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 3568999999996 599999999999999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++|||||||||+||||+.+|++||+|||+|+.+... ...+.+||+.|||||++.+...|+
T Consensus 307 yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~-----------------~~~t~~GTp~YmAPEvl~~~~~y~ 369 (689)
T 3v5w_A 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-----------------KPHASVGTHGYMAPEVLQKGVAYD 369 (689)
T ss_dssp HHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-----------------CCCSCCSCGGGCCHHHHSTTCCCC
T ss_pred HHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCC-----------------CCCCccCCcCccCHHHHhCCCCCC
Confidence 999999999999999999999999999999999865321 124569999999999997545799
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHH---HHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHH
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATE 682 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~---~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~e 682 (1196)
.++|||||||+||||++ ||..... .++...+......+| ...++++++||++||+.||.+|++ +++
T Consensus 370 ~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p---~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~e 446 (689)
T 3v5w_A 370 SSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP---DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQE 446 (689)
T ss_dssp THHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHH
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCC---ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHH
Confidence 99999999999999996 8875432 223333333333333 356789999999999999999998 899
Q ss_pred HHhccCCCCchHHHH
Q 000993 683 LLQDALPPQMEYELL 697 (1196)
Q Consensus 683 iL~~~~~~~~~~~~~ 697 (1196)
|++||||..+.|+.+
T Consensus 447 i~~HpfF~~idW~~l 461 (689)
T 3v5w_A 447 VKESPFFRSLDWQMV 461 (689)
T ss_dssp HTTSGGGTTCCHHHH
T ss_pred HhcCccccCCCHHHH
Confidence 999999999998865
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-46 Score=436.32 Aligned_cols=252 Identities=24% Similarity=0.331 Sum_probs=206.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCC-CCeeeeeeeeeecC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH-QHVVRYYQAWFETG 453 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~H-pnIV~l~~~~~e~~ 453 (1196)
.++|++.+.||+|+||+||+|++..+ ++.||||+++.. ......+.+.+|+.+|++++| ||||+++++|.+.
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~-~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~- 140 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP- 140 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT-
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccc-cChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec-
Confidence 37899999999999999999998754 368999998743 334456789999999999965 8999999998432
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------------CCC
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DHF 516 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~l 516 (1196)
...+|||||||+ |+|.++|+.. ..+
T Consensus 141 --------------------------------------~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l 182 (353)
T 4ase_A 141 --------------------------------------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 182 (353)
T ss_dssp --------------------------------------TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCB
T ss_pred --------------------------------------CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccC
Confidence 235799999997 5999999753 348
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccc
Q 000993 517 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 596 (1196)
Q Consensus 517 ~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 596 (1196)
++.++..++.|||+||+|||+++||||||||+|||++.++++||+|||+|+.+.... ........+|
T Consensus 183 ~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~-------------~~~~~~~~~g 249 (353)
T 4ase_A 183 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP-------------DYVRKGDARL 249 (353)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCT-------------TSEEETTEEE
T ss_pred CHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhhhcccCC-------------Cceeeccccc
Confidence 999999999999999999999999999999999999999999999999998653221 0112345689
Q ss_pred cccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccC
Q 000993 597 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 672 (1196)
Q Consensus 597 T~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~ 672 (1196)
|+.|||||++.+ ..|+.++|||||||+||||+| ||......+.....+. .+..++.+...++++.+||.+||+.
T Consensus 250 t~~ymAPE~l~~-~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~-~g~~~~~p~~~~~~~~~li~~c~~~ 327 (353)
T 4ase_A 250 PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK-EGTRMRAPDYTTPEMYQTMLDCWHG 327 (353)
T ss_dssp CGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH-HTCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred cccccCHHHHhc-CCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHH-cCCCCCCCccCCHHHHHHHHHHcCc
Confidence 999999999998 579999999999999999986 8876554444444444 3333444456778999999999999
Q ss_pred CCCCCCCHHHHHhc
Q 000993 673 SPSDRPSATELLQD 686 (1196)
Q Consensus 673 dP~~RPta~eiL~~ 686 (1196)
||.+|||+.+|++|
T Consensus 328 dP~~RPt~~eil~~ 341 (353)
T 4ase_A 328 EPSQRPTFSELVEH 341 (353)
T ss_dssp SGGGSCCHHHHHHH
T ss_pred ChhHCcCHHHHHHH
Confidence 99999999999987
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-46 Score=433.87 Aligned_cols=267 Identities=22% Similarity=0.327 Sum_probs=202.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCcc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~ 455 (1196)
.+.|++.++||+|+||+||+|+++ .+++.||||++.... ...++.+|+.+|+.+ +|||||+++++|.+
T Consensus 20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~---- 91 (361)
T 4f9c_A 20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS----HPIRIAAELQCLTVAGGQDNVMGVKYCFRK---- 91 (361)
T ss_dssp GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE----
T ss_pred cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc----CHHHHHHHHHHHHHhcCCCCCceEEEEEEE----
Confidence 367999999999999999999986 357899999986432 245688999999998 69999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
..++|||||||+ |+|.+++. .+++.+++.++.||+.||+|
T Consensus 92 ------------------------------------~~~~~lvmE~~~g~~L~~~~~---~l~~~~~~~~~~qll~al~y 132 (361)
T 4f9c_A 92 ------------------------------------NDHVVIAMPYLEHESFLDILN---SLSFQEVREYMLNLFKALKR 132 (361)
T ss_dssp ------------------------------------TTEEEEEEECCCCCCHHHHHT---TCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEeCCCcccHHHHHc---CCCHHHHHHHHHHHHHHHHH
Confidence 467899999997 59999884 59999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCC-CCeEEeccCcchhccccccccCCCCC-------CC------CCCccccCcCccccccC
Q 000993 535 IHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFP-------TD------TGGVSVDGTGQVGTYFY 600 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~-~~vKL~DFGlA~~~~~~~~~~~~~~~-------~~------~~~~~~~~~~~~GT~~Y 600 (1196)
||++||+||||||+|||++.+ +++||+|||+|+.............. .. ........++.+||+.|
T Consensus 133 lH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y 212 (361)
T 4f9c_A 133 IHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGF 212 (361)
T ss_dssp HHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGG
T ss_pred HHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccc
Confidence 999999999999999999877 79999999999865432111000000 00 00001123456899999
Q ss_pred CCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHH-HHhhh-----------------------------
Q 000993 601 TAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVL-SDLKQ----------------------------- 647 (1196)
Q Consensus 601 ~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~-~~l~~----------------------------- 647 (1196)
||||++.+.+.|+.++||||+||++|||++ ||....+....+ .+...
T Consensus 213 ~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~ 292 (361)
T 4f9c_A 213 RAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLR 292 (361)
T ss_dssp CCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHH
T ss_pred cCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhh
Confidence 999999886679999999999999999997 885433221111 11000
Q ss_pred ----------------------cCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 648 ----------------------KGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 648 ----------------------~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
.......+...++++.+||++||..||.+|||++|+|+||||++++
T Consensus 293 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i~ 360 (361)
T 4f9c_A 293 KLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMS 360 (361)
T ss_dssp HHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC-
T ss_pred HHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence 0001123455678999999999999999999999999999998763
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-45 Score=452.54 Aligned_cols=258 Identities=23% Similarity=0.418 Sum_probs=222.1
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
...+++|++++.||+|+||+||+|+++.+|+.||||++.... ....+.+.+|+.+|+.++|||||+++++|.
T Consensus 153 ~~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~------ 224 (573)
T 3uto_A 153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFE------ 224 (573)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEE------
T ss_pred CcCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc--hhhHHHHHHHHHHHHhCCCCCCCeEEEEEE------
Confidence 345689999999999999999999999999999999997533 334567899999999999999999999883
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
+...+|||||||+ |+|.+++.. .+.+++.+++.++.||+.||+|
T Consensus 225 ----------------------------------~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~y 270 (573)
T 3uto_A 225 ----------------------------------DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCH 270 (573)
T ss_dssp ----------------------------------CSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------ECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 3467899999996 599998864 4679999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCC--CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDAR--NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~--~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
||++||+||||||+|||++.+ +++||+|||+|+.+.... .....+||+.|||||++.+ ..|
T Consensus 271 lH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~----------------~~~~~~GT~~y~APEv~~~-~~y 333 (573)
T 3uto_A 271 MHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ----------------SVKVTTGTAEFAAPEVAEG-KPV 333 (573)
T ss_dssp HHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS----------------EEEEECSSGGGCCHHHHTT-CCB
T ss_pred HHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC----------------ceeeeEECccccCHHHhCC-CCC
Confidence 999999999999999999865 899999999998753221 1245689999999999998 569
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
+.++|||||||+||||++ ||......+....+......+++ .+...++++++||++||+.||.+|||+.++|+|||
T Consensus 334 ~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw 413 (573)
T 3uto_A 334 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPW 413 (573)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTT
T ss_pred CcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcC
Confidence 999999999999999996 89887777776666555555443 45678899999999999999999999999999999
Q ss_pred CCCch
Q 000993 689 PPQME 693 (1196)
Q Consensus 689 ~~~~~ 693 (1196)
|....
T Consensus 414 ~~~~~ 418 (573)
T 3uto_A 414 LTPGN 418 (573)
T ss_dssp TSCCC
T ss_pred cCCCC
Confidence 98653
|
| >1usy_A ATP phosphoribosyltransferase regulatory subunit; aminoacyl-tRNA synthetase; HET: HIS; 2.52A {Thermotoga maritima} SCOP: d.104.1.1 PDB: 1usy_C* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-46 Score=414.86 Aligned_cols=262 Identities=17% Similarity=0.207 Sum_probs=217.4
Q ss_pred HHHHHHHH--HHHHHcCCccccccceeecCCCcccccceEEEeecCCceEeecCCCcHHHHHHHHh--CCC-CceeEEEe
Q 000993 756 DYVVQVTK--EMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAIS--NQK-SSFKRYEI 830 (1196)
Q Consensus 756 ~~I~~~i~--~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~--~~~-~P~r~~Y~ 830 (1196)
+++++.++ ++|++|||++|.||+|........ + +|.|++|+.++||||+|+|+| ... +.. .|+|+||+
T Consensus 4 ~~le~~~r~~~~~~~~Gy~eI~tP~le~~~l~~~--d---~f~d~~g~~l~LRpd~T~~~a--~~~~~~~~~~p~R~~y~ 76 (275)
T 1usy_A 4 LDFEKVFSFYSKATKKGFSPFFVPALEKAEEPAG--N---FFLDRKGNLFSIREDFTKTVL--NHRKRYSPDSQIKVWYA 76 (275)
T ss_dssp CCHHHHHHHHHHHHHTTCEECCCCSEEECSSCCS--S---CEEETTSCEEEECCCHHHHHH--HHHTTCTTCCCEEEECC
T ss_pred HhHHHHHHHHHHHHHCCCEEecCccccchhhhcc--c---ccCCCCCCEEEeCCcChHHHH--HHHhhcCCCCceEEEEe
Confidence 35667777 999999999999999955444221 2 568999999999999999999 222 225 79999999
Q ss_pred cCeeecCCCCCCCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEeCcHHHHHHHHHHcCCCHHHHHHHH
Q 000993 831 SSVYRRAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVA 910 (1196)
Q Consensus 831 G~VfR~e~~~~~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~ 910 (1196)
|+|||+|+++. |||+|+|+|+||.+++.+|+|||.++.++|+.+|+++ ++|+|||+++++.+++. ++++++++++
T Consensus 77 g~vfR~e~~~~--Ref~Q~g~ei~g~~~~~~DaEvi~l~~~~l~~lgl~~-~~i~l~~~~~~~~~~~~--~~~~~~~~l~ 151 (275)
T 1usy_A 77 DFVYRYSGSDL--VAEYQLGLEKVPRNSLDDSLEVLEIIVESASEFFEGP-VIVEIGHTGVYEDLLKE--IPKDLHEKVL 151 (275)
T ss_dssp EEEEEEETTEE--EEEEEEEEEEESCCSHHHHHHHHHHHHHHHHHHCCSC-EEEEEEETTHHHHHHTT--SCGGGHHHHH
T ss_pred ceEEecCCCCC--CeeeEeCEEEecCCCchhHHHHHHHHHHHHHHcCCCC-eEEEeCCHHHHHHHHHh--CCHHHHHHHH
Confidence 99999999988 8899999999999999999999999999999999985 99999999999999875 6777788899
Q ss_pred HHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChHHHHHHHHH--HH
Q 000993 911 ELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDEL--YL 988 (1196)
Q Consensus 911 ~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L--~l 988 (1196)
++++++++ . ++ ++.+..++++++.++.+..++ .+.|.+ ++++. +..++...+.|+++ ++
T Consensus 152 ~~l~~~~~---------~---~~-~~~l~~~~l~~~~~~~l~~l~-~~~g~~-~~l~~----l~~~~~~l~~l~~l~~~l 212 (275)
T 1usy_A 152 NLIDTKNL---------A---EI-EFLSHMKKIDLSRVEKIIEDS-IYRRSP-EHLKT----MDLPLSVREDLLSASSFL 212 (275)
T ss_dssp HHHHTTCH---------H---HH-HHHHHHTCCCCTHHHHHHHHH-HHCCSG-GGGGT----SCCCHHHHHHHHHHHHHH
T ss_pred HHHHccCH---------H---HH-HHHHHhcCCCHHHHHHHHHHH-HhhCCH-HHHHH----HhcCHHHHHHHHHHHHHH
Confidence 99988762 1 22 455667899988999999998 566664 44443 33455667777777 88
Q ss_pred H-HcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchhhhhccccccccccCCCCCCCccee
Q 000993 989 R-IWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGA 1067 (1196)
Q Consensus 989 ~-~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGf 1067 (1196)
+ .+| ..++.||++++||++||||+|||+|..+.+ ++||+|||||+| ++|||||
T Consensus 213 ~~~~g-~~~~~~D~~lvRgldYYtG~vFe~~~~~~~--------~~i~~GGRYD~l-----------------~~pavGf 266 (275)
T 1usy_A 213 QEKFP-TVSVEIDLTLARTIEEYCGLIFTIYDTSSS--------RLVAAGGEYTVN-----------------GEKGVGG 266 (275)
T ss_dssp HHHCS-SSEEEECCCCGGGGGTCSSEEEEEEETTTT--------EEEEEEEEEEET-----------------TEEEEEE
T ss_pred HHhcC-CCeEEEeccccCCCCccCCeEEEEEECCCC--------CeEeeecCCCCC-----------------CCCEEEE
Confidence 8 888 558999999999999999999999987433 489999999997 3599999
Q ss_pred cccHHHH
Q 000993 1068 SLALETI 1074 (1196)
Q Consensus 1068 aiglerl 1074 (1196)
|+|+||+
T Consensus 267 sig~er~ 273 (275)
T 1usy_A 267 SIFLEGK 273 (275)
T ss_dssp EEEEEEE
T ss_pred EEEeecc
Confidence 9999986
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-44 Score=409.17 Aligned_cols=253 Identities=22% Similarity=0.281 Sum_probs=187.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|.+.++||+|+||+||+|++ +|+.||||+++... .....+..|+..+..++|||||+++++|.+.+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~------- 70 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDN------- 70 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-------
T ss_pred cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecC-------
Confidence 4688999999999999999988 49999999986421 12222334666667889999999999986531
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC-
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ- 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~- 538 (1196)
.....+|||||||+ |+|.++++. .+++++.+.+++.|++.||+|||++
T Consensus 71 -----------------------------~~~~~~~lV~Ey~~~gsL~~~l~~-~~l~~~~~~~i~~~ia~gl~ylH~~~ 120 (303)
T 3hmm_A 71 -----------------------------GTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEI 120 (303)
T ss_dssp -----------------------------SSSEEEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCB
T ss_pred -----------------------------CCceEEEEEecCCCCCcHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 11346899999997 699999975 4689999999999999999999987
Q ss_pred -------CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC-
Q 000993 539 -------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP- 610 (1196)
Q Consensus 539 -------gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~- 610 (1196)
+|+||||||+||||+.++++||+|||+|+........ ........+||+.|||||++.+..
T Consensus 121 ~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~-----------~~~~~~~~~GT~~ymAPE~l~~~~~ 189 (303)
T 3hmm_A 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT-----------IDIAPNHRVGTKRYMAPEVLDDSIN 189 (303)
T ss_dssp CSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTE-----------ESCC-----CCGGGCCHHHHTTCSC
T ss_pred hhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCc-----------eeeecccccccccccCHHHhccccc
Confidence 8999999999999999999999999999865432110 011224568999999999997632
Q ss_pred ----CCCCcchhHHHHHHHHHhhc---CC----------chhH----HHHHHHHHhhhcCC---CCCcccc--CCHHHHH
Q 000993 611 ----KIDEKADMYSLGIVFFELWH---PF----------STAM----ERQIVLSDLKQKGE---LPPSWVA--KFSEQES 664 (1196)
Q Consensus 611 ----~~s~ksDVwSlGviLyELlt---Pf----------~~~~----~~~~~~~~l~~~~~---~p~~~~~--~~~~l~~ 664 (1196)
.|+.++|||||||+||||+| || .... ..+.....+..... +|..+.. .+..+.+
T Consensus 190 ~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~ 269 (303)
T 3hmm_A 190 MKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAK 269 (303)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHH
T ss_pred ccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHH
Confidence 36779999999999999986 22 2111 11222222222222 2222221 2236789
Q ss_pred HHHHcccCCCCCCCCHHHHHhc
Q 000993 665 LLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 665 LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|+.+||+.||++|||+.+|++.
T Consensus 270 li~~cl~~dP~~RPt~~ei~~~ 291 (303)
T 3hmm_A 270 IMRECWYANGAARLTALRIKKT 291 (303)
T ss_dssp HHHTTCCSSGGGSCCHHHHHHH
T ss_pred HHHHHcccCHhHCcCHHHHHHH
Confidence 9999999999999999999874
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-43 Score=404.36 Aligned_cols=255 Identities=27% Similarity=0.441 Sum_probs=220.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.+++|++++.||+|+||.||+|++..+|+.||||++..........+.+.+|+.+|+.++||||+++++++.
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~-------- 84 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIE-------- 84 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--------
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE--------
Confidence 468999999999999999999999999999999999876656566778999999999999999999998873
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....+|+|||||+ ++|.+++...+.+++..++.++.||+.||+|||+
T Consensus 85 --------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~ 132 (328)
T 3fe3_A 85 --------------------------------TEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 132 (328)
T ss_dssp --------------------------------CSSEEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------ECCEEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2456899999996 5999999988999999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++++||+|||+++...... .....+||+.|+|||++.+...++.++|
T Consensus 133 ~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~~~~~~D 196 (328)
T 3fe3_A 133 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG----------------KLDAFCGAPPYAAPELFQGKKYDGPEVD 196 (328)
T ss_dssp TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC----------------GGGTTSSSGGGCCHHHHHTCCCCSHHHH
T ss_pred CCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC----------------ccccccCCcceeCcccccCCCcCCchhh
Confidence 999999999999999999999999999997643211 1245689999999999998544568999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||||||++|||++ ||......+............|. ..++++.+||++||+.||.+|||++++++|+|+...
T Consensus 197 iwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~ 271 (328)
T 3fe3_A 197 VWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF---YMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAG 271 (328)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTT
T ss_pred hhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC---CCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCC
Confidence 9999999999996 88877666665555554444443 356799999999999999999999999999999764
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-42 Score=390.85 Aligned_cols=258 Identities=27% Similarity=0.463 Sum_probs=212.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|++++.||+|+||+||+|+++.+|+.||||+++...........+.+|+.+++.++||||+++++++.+
T Consensus 1 l~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 72 (292)
T 3o0g_A 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-------- 72 (292)
T ss_dssp CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEE--------
T ss_pred CCCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEe--------
Confidence 468999999999999999999999999999999998766655666789999999999999999999998732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+|||||++++.+.+.. ...+++..++.++.||+.||+|||++
T Consensus 73 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~ 120 (292)
T 3o0g_A 73 --------------------------------DKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120 (292)
T ss_dssp --------------------------------TTEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCEEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 456899999999988877765 56799999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+...++.++||
T Consensus 121 ~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di 185 (292)
T 3o0g_A 121 NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV---------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDM 185 (292)
T ss_dssp TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC---------------SCCCSCCSCGGGCCHHHHTTCSCCCTHHHH
T ss_pred CeecCCCCHHHEEEcCCCCEEEeecccceecCCcc---------------ccccCCccccCCcChHHHcCCCCcCchHHH
Confidence 99999999999999999999999999997643211 112445789999999999875568999999
Q ss_pred HHHHHHHHHhhc---CC-chhHHHHHHHHHhhhcCCCC--------------------------CccccCCHHHHHHHHH
Q 000993 619 YSLGIVFFELWH---PF-STAMERQIVLSDLKQKGELP--------------------------PSWVAKFSEQESLLRR 668 (1196)
Q Consensus 619 wSlGviLyELlt---Pf-~~~~~~~~~~~~l~~~~~~p--------------------------~~~~~~~~~l~~LI~~ 668 (1196)
|||||++|||++ || ................+..+ ......++++++||++
T Consensus 186 wslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 265 (292)
T 3o0g_A 186 WSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQN 265 (292)
T ss_dssp HHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHH
Confidence 999999999995 54 33333333222222111100 1112356788999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCc
Q 000993 669 LMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||+.||.+|||++++++||||...
T Consensus 266 ~L~~dP~~R~t~~e~l~hp~f~~~ 289 (292)
T 3o0g_A 266 LLKCNPVQRISAEEALQHPYFSDF 289 (292)
T ss_dssp HSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred HhccChhhCCCHHHHhcCcccccC
Confidence 999999999999999999999875
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=397.79 Aligned_cols=310 Identities=35% Similarity=0.672 Sum_probs=221.9
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
++++++|++.+.||+|+||.||+|+++.+|+.||||+++... .....+.+.+|+.+|+.++|||||+++++|.+.....
T Consensus 2 s~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 80 (332)
T 3qd2_B 2 SRYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEK 80 (332)
T ss_dssp CHHHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCH
T ss_pred chhhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccch
Confidence 678899999999999999999999999999999999997544 3345678999999999999999999999997653210
Q ss_pred cC--CCCcCCCC-----cccccccc----------cccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCC---
Q 000993 457 FD--GDSMWGSG-----TLASSTFS----------NRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDH--- 515 (1196)
Q Consensus 457 ~~--~~~~~~~g-----~~~~~~~~----------~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~--- 515 (1196)
+. .+..|... .+...... ........+..........++|+|||||++ +|.+++.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~ 160 (332)
T 3qd2_B 81 WQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLED 160 (332)
T ss_dssp HHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGG
T ss_pred hhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccc
Confidence 00 00000000 00000000 000000000000111234568999999975 99999987543
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcc
Q 000993 516 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 595 (1196)
Q Consensus 516 l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (1196)
.++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++............. ...........+
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~---~~~~~~~~~~~~ 237 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT---PMPAYATHTGQV 237 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC-----------------CCCSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccc---cccccccccccC
Confidence 56677899999999999999999999999999999999999999999999987643321111000 000012234568
Q ss_pred ccccCCCchhccCCCCCCCcchhHHHHHHHHHhhcCCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCC
Q 000993 596 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 675 (1196)
Q Consensus 596 GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELltPf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~ 675 (1196)
||+.|+|||++.+ ..++.++|||||||++|||++|+.+............ ....|..+...++++.+||.+||+.||.
T Consensus 238 gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 315 (332)
T 3qd2_B 238 GTKLYMSPEQIHG-NNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVR-NLKFPLLFTQKYPQEHMMVQDMLSPSPT 315 (332)
T ss_dssp -CGGGSCHHHHHC-CCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHH-TTCCCHHHHHHCHHHHHHHHHHHCSSGG
T ss_pred CCcCccChHHhcC-CCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhh-ccCCCcccccCChhHHHHHHHHccCCCC
Confidence 9999999999988 5789999999999999999998887665554444433 4456666666778899999999999999
Q ss_pred CCCCHHHHHhccCCCCc
Q 000993 676 DRPSATELLQDALPPQM 692 (1196)
Q Consensus 676 ~RPta~eiL~~~~~~~~ 692 (1196)
+|||+.++++|+||+++
T Consensus 316 ~Rps~~~~l~~~~f~~~ 332 (332)
T 3qd2_B 316 ERPEATDIIENAIFENL 332 (332)
T ss_dssp GSCCHHHHHHSTTCCCC
T ss_pred cCCCHHHHhhchhhhcC
Confidence 99999999999999864
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=400.04 Aligned_cols=259 Identities=27% Similarity=0.391 Sum_probs=220.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+++|++++.||+|+||+||+|+++.+|+.||||+++.... .......+.+|+.+|+.++||||++++++|..
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~------- 76 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT------- 76 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC-------
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEe-------
Confidence 5799999999999999999999999999999999975321 12234678899999999999999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+|||||+ |+|.+++.....+++..++.++.||+.||+|||+
T Consensus 77 ---------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~ 123 (337)
T 1o6l_A 77 ---------------------------------HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123 (337)
T ss_dssp ---------------------------------SSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 457899999997 5999999988899999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++++||+|||+++...... ......+||+.|+|||++.+ ..|+.++|
T Consensus 124 ~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~D 187 (337)
T 1o6l_A 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---------------ATMKTFCGTPEYLAPEVLED-NDYGRAVD 187 (337)
T ss_dssp TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT---------------CCBCCCEECGGGCCGGGGSS-SCBCTTHH
T ss_pred CCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC---------------CcccccccChhhCChhhhcC-CCCCchhh
Confidence 999999999999999999999999999997532110 11345689999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccCC
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALP 689 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~~ 689 (1196)
||||||++|||++ ||...........+......+|. ..++++.+||++||+.||.+|| +++++++|+||
T Consensus 188 iwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f 264 (337)
T 1o6l_A 188 WWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR---TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264 (337)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGG
T ss_pred cccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCc
Confidence 9999999999996 88776665555555544444443 4567999999999999999999 89999999999
Q ss_pred CCchHHHH
Q 000993 690 PQMEYELL 697 (1196)
Q Consensus 690 ~~~~~~~~ 697 (1196)
....+..+
T Consensus 265 ~~~~~~~~ 272 (337)
T 1o6l_A 265 LSINWQDV 272 (337)
T ss_dssp TTCCHHHH
T ss_pred CCCCHHHH
Confidence 99987644
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-42 Score=400.63 Aligned_cols=262 Identities=23% Similarity=0.364 Sum_probs=222.3
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc----hhHHHHHHHHHHHHhcCCCCeeeeeeeeeec
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----PVNDRILREVATLSRLQHQHVVRYYQAWFET 452 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~----~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~ 452 (1196)
....+.|++.+.||+|+||.||+|+++.+|+.||||+++...... ...+.+.+|+.+|+.++||||++++++|.
T Consensus 8 ~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-- 85 (361)
T 2yab_A 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYE-- 85 (361)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEE--
T ss_pred CChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEE--
Confidence 345578999999999999999999999999999999998654321 13567899999999999999999999873
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~g 531 (1196)
+...+|+|||||+ ++|.+++.....+++..++.++.||+.|
T Consensus 86 --------------------------------------~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~a 127 (361)
T 2yab_A 86 --------------------------------------NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127 (361)
T ss_dssp --------------------------------------CSSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHH
T ss_pred --------------------------------------eCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 2457899999995 6999999888899999999999999999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCCC----CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDARN----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~~----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
|+|||++||+||||||+|||++.++ ++||+|||+++...... .....+||+.|+|||++.
T Consensus 128 L~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~ 191 (361)
T 2yab_A 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV----------------EFKNIFGTPEFVAPEIVN 191 (361)
T ss_dssp HHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTC----------------CCCCCCSCGGGCCHHHHT
T ss_pred HHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCC----------------ccccCCCCccEECchHHc
Confidence 9999999999999999999998877 79999999998643211 123467999999999998
Q ss_pred CCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHH
Q 000993 608 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATEL 683 (1196)
Q Consensus 608 ~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~ei 683 (1196)
+ ..|+.++|||||||++|+|++ ||......+....+......+++ .+...++.+++||++||..||.+|||+.++
T Consensus 192 ~-~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~ 270 (361)
T 2yab_A 192 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEA 270 (361)
T ss_dssp T-CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred C-CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 7 568999999999999999996 88777666665555554444443 445678899999999999999999999999
Q ss_pred HhccCCCCchHH
Q 000993 684 LQDALPPQMEYE 695 (1196)
Q Consensus 684 L~~~~~~~~~~~ 695 (1196)
++|||+....+.
T Consensus 271 l~hp~~~~~~~~ 282 (361)
T 2yab_A 271 LRHPWITPVDTQ 282 (361)
T ss_dssp HTSTTTSCSSHH
T ss_pred hcCcCcCCCchh
Confidence 999999977543
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=404.58 Aligned_cols=261 Identities=25% Similarity=0.400 Sum_probs=217.1
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCcc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~ 455 (1196)
..+++|++++.||+|+||+||+|+++.+|+.||||+++.... .......+.+|..+|+.+ +||||++++++|.
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~----- 94 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQ----- 94 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEE-----
Confidence 346899999999999999999999999999999999975321 122345688999999988 7999999998873
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+|+|||||+ |+|.+++.....+++..++.++.||+.||+|
T Consensus 95 -----------------------------------~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~ 139 (353)
T 3txo_A 95 -----------------------------------TPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMF 139 (353)
T ss_dssp -----------------------------------CSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------eCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 2457899999997 5999999988999999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++++||+|||+|+...... ......+||+.|+|||++.+ ..|+.
T Consensus 140 LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~ 203 (353)
T 3txo_A 140 LHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG---------------VTTATFCGTPDYIAPEILQE-MLYGP 203 (353)
T ss_dssp HHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC------------------------CCGGGCCHHHHHH-HHCTT
T ss_pred HHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCC---------------ccccccCCCcCeEChhhcCC-CCcCC
Confidence 999999999999999999999999999999997432111 12345689999999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH------HHHHh
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA------TELLQ 685 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta------~eiL~ 685 (1196)
++|||||||++|||++ ||......+....+......+|. ..++++.+||++||+.||.+||++ +++++
T Consensus 204 ~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 204 AVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT---WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred ccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 9999999999999996 88877777666666654444443 356789999999999999999998 99999
Q ss_pred ccCCCCchHHHH
Q 000993 686 DALPPQMEYELL 697 (1196)
Q Consensus 686 ~~~~~~~~~~~~ 697 (1196)
|+||....|..+
T Consensus 281 hp~f~~~~w~~l 292 (353)
T 3txo_A 281 HPFFKEIDWAQL 292 (353)
T ss_dssp SGGGTTCCHHHH
T ss_pred CCcccCCCHHHH
Confidence 999999988754
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-42 Score=392.64 Aligned_cols=262 Identities=24% Similarity=0.438 Sum_probs=209.3
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
....++|++++.||+|+||+||+|++. +|+.||||++............+.+|+.+++.++||||+++++++.
T Consensus 17 q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~------ 89 (311)
T 3niz_A 17 QGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIH------ 89 (311)
T ss_dssp ECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEEC------
T ss_pred cchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEc------
Confidence 345689999999999999999999996 6999999999765554445678899999999999999999999873
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
....+|+|||||+++|.+.+... ..+++..++.++.||+.||+||
T Consensus 90 ----------------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~L 135 (311)
T 3niz_A 90 ----------------------------------SERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135 (311)
T ss_dssp ----------------------------------CSSCEEEEEECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------cCCEEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 23568999999999999888765 4599999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+...++.+
T Consensus 136 H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~~~ 200 (311)
T 3niz_A 136 HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV---------------RSYTHEVVTLWYRAPDVLMGSKKYSTS 200 (311)
T ss_dssp HHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC---------------C---CCCCCCTTCCHHHHTTCCSCCTH
T ss_pred HHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCc---------------ccccCCcccCCcCCHHHhcCCCCCCch
Confidence 99999999999999999999999999999998643211 112345789999999999875678999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-CCC--------------------------ccccCCHHHHHH
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LPP--------------------------SWVAKFSEQESL 665 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-~p~--------------------------~~~~~~~~l~~L 665 (1196)
+|||||||++|+|++ ||................+. .+. .....++++.+|
T Consensus 201 ~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 280 (311)
T 3niz_A 201 VDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDL 280 (311)
T ss_dssp HHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHH
T ss_pred HHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHH
Confidence 999999999999996 77654443332222221111 111 112345788999
Q ss_pred HHHcccCCCCCCCCHHHHHhccCCCCchH
Q 000993 666 LRRLMSPSPSDRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 666 I~~cL~~dP~~RPta~eiL~~~~~~~~~~ 694 (1196)
|++||+.||.+|||+.++++||||++...
T Consensus 281 i~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 309 (311)
T 3niz_A 281 LSNMLCFDPNKRISARDAMNHPYFKDLDP 309 (311)
T ss_dssp HHHHSCSCTTTSCCHHHHHTSGGGTTSCT
T ss_pred HHHHcCCChhHCCCHHHHhcCcccccCCc
Confidence 99999999999999999999999998653
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-42 Score=393.92 Aligned_cols=257 Identities=27% Similarity=0.441 Sum_probs=220.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.+++|++++.||+|+||+||+|+++.+|+.||+|+++.... .....+.+.+|..+++.++||||++++++|.
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~------- 76 (318)
T 1fot_A 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQ------- 76 (318)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEE-------
T ss_pred ChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEE-------
Confidence 35799999999999999999999999999999999975321 1123456889999999999999999998873
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
+...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||
T Consensus 77 ---------------------------------~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH 123 (318)
T 1fot_A 77 ---------------------------------DAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH 123 (318)
T ss_dssp ---------------------------------CSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------eCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2457899999997 599999998889999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++++||+|||+++.... .....+||+.|+|||++.+ ..++.++
T Consensus 124 ~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~ 184 (318)
T 1fot_A 124 SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD------------------VTYTLCGTPDYIAPEVVST-KPYNKSI 184 (318)
T ss_dssp TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS------------------CBCCCCSCTTTCCHHHHTT-CCBCTTH
T ss_pred HCCccccCCChheEEEcCCCCEEEeecCcceecCC------------------ccccccCCccccCHhHhcC-CCCCccc
Confidence 99999999999999999999999999999975421 1234589999999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDAL 688 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~ 688 (1196)
|||||||++|||++ ||...........+......+|+ ..++++.+||++||+.||.+|| +++++++|||
T Consensus 185 DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~ 261 (318)
T 1fot_A 185 DWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP---FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPW 261 (318)
T ss_dssp HHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred chhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC---CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCcc
Confidence 99999999999996 88776666665555554444443 3567999999999999999999 9999999999
Q ss_pred CCCchHHHH
Q 000993 689 PPQMEYELL 697 (1196)
Q Consensus 689 ~~~~~~~~~ 697 (1196)
|....++.+
T Consensus 262 f~~~~~~~~ 270 (318)
T 1fot_A 262 FKEVVWEKL 270 (318)
T ss_dssp GSSCCHHHH
T ss_pred ccCCCHHHH
Confidence 999887644
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-42 Score=386.28 Aligned_cols=257 Identities=25% Similarity=0.456 Sum_probs=207.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|++++.||+|+||+||+|++ .+|+.||||++............+.+|+.+++.++||||+++++++..
T Consensus 1 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 71 (288)
T 1ob3_A 1 MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT-------- 71 (288)
T ss_dssp CCSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC--------
T ss_pred CccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEcc--------
Confidence 36899999999999999999999 589999999997654433344678899999999999999999998732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+||||++++|.+++... ..+++..++.++.||+.||+|||++
T Consensus 72 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 119 (288)
T 1ob3_A 72 --------------------------------KKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119 (288)
T ss_dssp --------------------------------SSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCeEEEEEEecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3467999999999999998764 6799999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+...++.++||
T Consensus 120 ~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di 184 (288)
T 1ob3_A 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV---------------RKYTHEIVTLWYRAPDVLMGSKKYSTTIDI 184 (288)
T ss_dssp TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------------------------CCCTTCCHHHHTTCCSCCTHHHH
T ss_pred CeecCCCCHHHEEEcCCCCEEEeECccccccCccc---------------cccccccccccccCchheeCCCCCCcHHHH
Confidence 99999999999999999999999999998653211 112345789999999999875668999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC----------------------C----CccccCCHHHHHHHHHc
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL----------------------P----PSWVAKFSEQESLLRRL 669 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~----------------------p----~~~~~~~~~l~~LI~~c 669 (1196)
|||||++|||++ ||................+.. + ......++++.+||++|
T Consensus 185 wslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 264 (288)
T 1ob3_A 185 WSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKM 264 (288)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHH
Confidence 999999999996 787655544443332211110 0 01123567889999999
Q ss_pred ccCCCCCCCCHHHHHhccCCCCc
Q 000993 670 MSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 670 L~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|+.||.+|||+.++++|+||.+.
T Consensus 265 L~~dP~~Rpt~~e~l~hp~f~~~ 287 (288)
T 1ob3_A 265 LKLDPNQRITAKQALEHAYFKEN 287 (288)
T ss_dssp TCSSTTTSCCHHHHHTSGGGGC-
T ss_pred cCCCcccCCCHHHHhcCcchhhc
Confidence 99999999999999999999763
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=386.55 Aligned_cols=255 Identities=22% Similarity=0.374 Sum_probs=214.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++.+.||+|+||+||+|++..+|+.||||++...... ..+.+.+|+.+++.++||||++++++|..
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------- 88 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLV------- 88 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc--HHHHHHHHHHHHhcCCCCCCCeEeEEEEE-------
Confidence 347899999999999999999999999999999999765433 34678899999999999999999998743
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+|||||+ ++|.+++... .+++..++.++.||+.||+|||+
T Consensus 89 ---------------------------------~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~ 134 (297)
T 3fxz_A 89 ---------------------------------GDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHS 134 (297)
T ss_dssp ---------------------------------TTEEEEEEECCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEECCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHh
Confidence 346799999995 5999988764 69999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|
T Consensus 135 ~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~D 198 (297)
T 3fxz_A 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---------------SKRSTMVGTPYWMAPEVVTR-KAYGPKVD 198 (297)
T ss_dssp TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT---------------CCBCCCCSCGGGCCHHHHHC-SCBCTHHH
T ss_pred CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc---------------cccCCccCCcCccChhhhcC-CCCCcHHH
Confidence 999999999999999999999999999997643221 11234689999999999988 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||||||++|||++ ||..........................++.+.+||.+||+.||.+|||+.++++|+|++..
T Consensus 199 iwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 276 (297)
T 3fxz_A 199 IWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIA 276 (297)
T ss_dssp HHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhccc
Confidence 9999999999997 88766655554444443333334445677899999999999999999999999999999764
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-42 Score=396.03 Aligned_cols=265 Identities=24% Similarity=0.421 Sum_probs=207.8
Q ss_pred CCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 375 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 375 ~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
+....+++|++++.||+|+||+||+|++..+|+.||||+++...........+.+|+.+++.++||||+++++++.+
T Consensus 28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 104 (329)
T 3gbz_A 28 PSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHH--- 104 (329)
T ss_dssp ----CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEE---
T ss_pred CcccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEec---
Confidence 34556789999999999999999999999999999999997655544455678899999999999999999998733
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|+|||||+++|.+++.....+++..++.++.||+.||+|
T Consensus 105 -------------------------------------~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~ 147 (329)
T 3gbz_A 105 -------------------------------------NHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNF 147 (329)
T ss_dssp -------------------------------------TTEEEEEEECCSEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 4568999999999999999998899999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEec-----CCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 535 IHGQGIIHRDLTPNNIFFD-----ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld-----~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
||++||+||||||+|||++ .++.+||+|||+++...... ......+||+.|+|||++.+.
T Consensus 148 LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~ 212 (329)
T 3gbz_A 148 CHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPI---------------RQFTHEIITLWYRPPEILLGS 212 (329)
T ss_dssp HHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC--------------------------CCTTCCHHHHTTC
T ss_pred HHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcc---------------cccCCCcCCccccCHHHhcCC
Confidence 9999999999999999995 44559999999998753221 112345789999999999875
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-cc--------------------------ccCC
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SW--------------------------VAKF 659 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~--------------------------~~~~ 659 (1196)
..++.++|||||||++|||++ ||................+..+. .+ ...+
T Consensus 213 ~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (329)
T 3gbz_A 213 RHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLD 292 (329)
T ss_dssp CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSC
T ss_pred CCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccC
Confidence 668999999999999999996 78766555544443332111110 00 1145
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchH
Q 000993 660 SEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 660 ~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~ 694 (1196)
+++.+||++||+.||.+|||+.++|+||||.+..+
T Consensus 293 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 327 (329)
T 3gbz_A 293 DEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDF 327 (329)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSCS
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhCCcccCCCCC
Confidence 78899999999999999999999999999998754
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-42 Score=409.21 Aligned_cols=260 Identities=25% Similarity=0.437 Sum_probs=221.1
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
..++.++|++.+.||+|+||.||+|.++.+|+.||+|++............+.+|+.+++.++|||||+++++|.
T Consensus 6 ~~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~----- 80 (444)
T 3soa_A 6 CTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSIS----- 80 (444)
T ss_dssp -CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEE-----
T ss_pred cccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEE-----
Confidence 455678999999999999999999999999999999999876655556678999999999999999999999873
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
+...+|+|||||. |+|.+.+.....+++..++.++.||+.||+|
T Consensus 81 -----------------------------------~~~~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~ 125 (444)
T 3soa_A 81 -----------------------------------EEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH 125 (444)
T ss_dssp -----------------------------------CSSEEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------ECCEEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 2457899999996 5999999988999999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecC---CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
||++||+||||||+|||++. ++.+||+|||+++...... ......+||+.|+|||++.+ ..
T Consensus 126 lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~---------------~~~~~~~gt~~Y~APE~l~~-~~ 189 (444)
T 3soa_A 126 CHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ---------------QAWFGFAGTPGYLSPEVLRK-DP 189 (444)
T ss_dssp HHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC---------------CBCCCSCSCGGGCCHHHHTT-CC
T ss_pred HHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC---------------ceeecccCCcccCCHHHhcC-CC
Confidence 99999999999999999984 5789999999997643211 11234689999999999987 56
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
|+.++|||||||++|+|++ ||...................+ +.+...++++.+||.+||+.||.+|||+.++|+||
T Consensus 190 ~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp 269 (444)
T 3soa_A 190 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHP 269 (444)
T ss_dssp BCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSC
T ss_pred CCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCc
Confidence 8999999999999999996 8877766666655555444443 45567889999999999999999999999999999
Q ss_pred CCCC
Q 000993 688 LPPQ 691 (1196)
Q Consensus 688 ~~~~ 691 (1196)
|+..
T Consensus 270 ~~~~ 273 (444)
T 3soa_A 270 WISH 273 (444)
T ss_dssp TTHH
T ss_pred cccC
Confidence 9864
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=402.57 Aligned_cols=262 Identities=23% Similarity=0.379 Sum_probs=215.2
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCcc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~ 455 (1196)
..+++|++++.||+|+||+||+|+++.+++.||||+++..... ......+.+|..+|+.+ +|||||+++++|.
T Consensus 49 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~----- 123 (396)
T 4dc2_A 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ----- 123 (396)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEE-----
T ss_pred CChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEE-----
Confidence 3468999999999999999999999999999999999864322 22334678899999887 8999999999873
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
+...+|+|||||+ |+|.+++.....+++..++.++.||+.||+|
T Consensus 124 -----------------------------------~~~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~ 168 (396)
T 4dc2_A 124 -----------------------------------TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 168 (396)
T ss_dssp -----------------------------------CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------ECCEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 2457899999997 5999999988899999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++++||+|||+|+...... ......+||+.|+|||++.+ ..|+.
T Consensus 169 LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~---------------~~~~~~~gt~~Y~aPE~l~~-~~~~~ 232 (396)
T 4dc2_A 169 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------DTTSTFCGTPNYIAPEILRG-EDYGF 232 (396)
T ss_dssp HHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT---------------CCBCCCCBCGGGCCHHHHTT-CCBCT
T ss_pred HHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCC---------------CccccccCCcccCCchhhcC-CCCCh
Confidence 999999999999999999999999999999997421110 12345689999999999998 57899
Q ss_pred cchhHHHHHHHHHhhc---CCchhH---------HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH--
Q 000993 615 KADMYSLGIVFFELWH---PFSTAM---------ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-- 680 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~---------~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta-- 680 (1196)
++|||||||++|||++ ||.... .......+......+|. ..++++++||++||+.||.+||++
T Consensus 233 ~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~lL~~dP~~R~~~~~ 309 (396)
T 4dc2_A 233 SVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR---SLSVKAASVLKSFLNKDPKERLGCHP 309 (396)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSCTTTSTTCST
T ss_pred HHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCC---cCCHHHHHHHHHHhcCCHhHcCCCCC
Confidence 9999999999999996 885321 11122223333333343 456799999999999999999984
Q ss_pred ----HHHHhccCCCCchHHHHH
Q 000993 681 ----TELLQDALPPQMEYELLD 698 (1196)
Q Consensus 681 ----~eiL~~~~~~~~~~~~~~ 698 (1196)
+++++||||.++.|+.+.
T Consensus 310 ~~~~~ei~~Hpff~~i~w~~l~ 331 (396)
T 4dc2_A 310 QTGFADIQGHPFFRNVDWDMME 331 (396)
T ss_dssp TTHHHHHHHSTTTTTCCHHHHH
T ss_pred CCCHHHHhcCccccCCCHHHHH
Confidence 899999999999887653
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=410.19 Aligned_cols=281 Identities=27% Similarity=0.403 Sum_probs=203.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++++.||+|+||+||+|+++.+|+.||||++...........++.+|+.+|+.++|||||+++++|....
T Consensus 51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 125 (458)
T 3rp9_A 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKD----- 125 (458)
T ss_dssp SCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSC-----
T ss_pred cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCC-----
Confidence 347899999999999999999999999999999999765555556678999999999999999999999874321
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
......+|+||||++++|.+++.....+++..++.++.||+.||+|||++
T Consensus 126 ------------------------------~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~ 175 (458)
T 3rp9_A 126 ------------------------------VEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA 175 (458)
T ss_dssp ------------------------------TTTCCCEEEEECCCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ------------------------------cccCceEEEEEeccccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 01235689999999999999999888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCC-C-----------CCCCCccccCcCccccccCCCchhc
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAF-P-----------TDTGGVSVDGTGQVGTYFYTAPEIE 606 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~-~-----------~~~~~~~~~~~~~~GT~~Y~APE~l 606 (1196)
||+||||||+||||+.++++||+|||+|+............. . ..........+..+||+.|+|||++
T Consensus 176 ~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~ 255 (458)
T 3rp9_A 176 GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELI 255 (458)
T ss_dssp TCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHH
T ss_pred CcCCCCCChhhEEECCCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHh
Confidence 999999999999999999999999999987643221100000 0 0000011234567899999999987
Q ss_pred cCCCCCCCcchhHHHHHHHHHhhc--------------CCchhH--------------------HHHHHHHHhhhcC---
Q 000993 607 QGWPKIDEKADMYSLGIVFFELWH--------------PFSTAM--------------------ERQIVLSDLKQKG--- 649 (1196)
Q Consensus 607 ~~~~~~s~ksDVwSlGviLyELlt--------------Pf~~~~--------------------~~~~~~~~l~~~~--- 649 (1196)
.....|+.++||||||||||||++ +|.+.. .......+....+
T Consensus 256 ~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~ 335 (458)
T 3rp9_A 256 LLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPS 335 (458)
T ss_dssp TTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCC
T ss_pred hCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCC
Confidence 654679999999999999999985 222111 0111100000000
Q ss_pred -------------------------CCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchH
Q 000993 650 -------------------------ELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 650 -------------------------~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~ 694 (1196)
.+...+...++++.+||++||..||.+|||++++|+||||.+..+
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~ 405 (458)
T 3rp9_A 336 EEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRI 405 (458)
T ss_dssp HHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCC
T ss_pred HHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCC
Confidence 011123445789999999999999999999999999999998754
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=397.01 Aligned_cols=258 Identities=25% Similarity=0.437 Sum_probs=220.8
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
..+.++|++.+.||+|+||.||+|.++.+|+.||||++..........+.+.+|+.+++.++||||++++++|.+
T Consensus 25 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~----- 99 (362)
T 2bdw_A 25 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE----- 99 (362)
T ss_dssp CHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred CCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-----
Confidence 345678999999999999999999999999999999998766666666789999999999999999999998732
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|+|||||+ ++|.+.+.....+++..++.++.||+.||+||
T Consensus 100 -----------------------------------~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~l 144 (362)
T 2bdw_A 100 -----------------------------------ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 144 (362)
T ss_dssp -----------------------------------SSEEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 456899999997 49999998888899999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCC---CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 536 HGQGIIHRDLTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~---~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
|++||+||||||+|||++.++ .+||+|||+++...... .....+||+.|+|||++.+ ..|
T Consensus 145 H~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~~~ 207 (362)
T 2bdw_A 145 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE----------------AWHGFAGTPGYLSPEVLKK-DPY 207 (362)
T ss_dssp HHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC----------------SCCCSCSCTTTCCHHHHTT-CCC
T ss_pred HHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc----------------ccccCCCCccccCHHHHcc-CCC
Confidence 999999999999999998654 59999999997643211 1234689999999999987 568
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
+.++|||||||++|+|++ ||...........+.......+ +.+...++++.+||.+||+.||.+|||+.++|+|+|
T Consensus 208 ~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 287 (362)
T 2bdw_A 208 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPW 287 (362)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHH
T ss_pred CchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence 999999999999999997 8877666555555544444443 456678899999999999999999999999999999
Q ss_pred CCC
Q 000993 689 PPQ 691 (1196)
Q Consensus 689 ~~~ 691 (1196)
+..
T Consensus 288 ~~~ 290 (362)
T 2bdw_A 288 ICN 290 (362)
T ss_dssp HHT
T ss_pred cCC
Confidence 864
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=400.71 Aligned_cols=276 Identities=24% Similarity=0.335 Sum_probs=207.4
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~ 456 (1196)
...++|++++.||+|+||.||+|.++.+|+.||||++............+.+|+.+|+.+. ||||++++++|...
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~---- 81 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRAD---- 81 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECT----
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecC----
Confidence 3468999999999999999999999999999999999765555666778899999999997 99999999987431
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
+...+|+|||||+++|.+++.. ..+++..++.++.||+.||+|||
T Consensus 82 ----------------------------------~~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH 126 (388)
T 3oz6_A 82 ----------------------------------NDRDVYLVFDYMETDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLH 126 (388)
T ss_dssp ----------------------------------TSSCEEEEEECCSEEHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCEEEEEecccCcCHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 2346899999999999998876 57999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCC-CC-----CCCCCccccCcCccccccCCCchhccCCC
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA-FP-----TDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 610 (1196)
++||+||||||+|||++.++.+||+|||+|+.+.......... .. ..........+..+||+.|+|||++.+..
T Consensus 127 ~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 206 (388)
T 3oz6_A 127 SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGST 206 (388)
T ss_dssp HTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCC
T ss_pred hCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCC
Confidence 9999999999999999999999999999998653211100000 00 00000112235568999999999998766
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC----------------------------------
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP---------------------------------- 653 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~---------------------------------- 653 (1196)
.|+.++|||||||++|||++ ||...........+....+..+.
T Consensus 207 ~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (388)
T 3oz6_A 207 KYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFT 286 (388)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHH
T ss_pred CCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCc
Confidence 79999999999999999997 78766554444333221111000
Q ss_pred ----------ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 654 ----------SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 654 ----------~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
.....++++.+||++||+.||.+|||++++|+|||+...
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~ 335 (388)
T 3oz6_A 287 KWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIF 335 (388)
T ss_dssp HHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTT
T ss_pred chhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHh
Confidence 011456789999999999999999999999999999764
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=396.21 Aligned_cols=257 Identities=26% Similarity=0.402 Sum_probs=220.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.+++|++++.||+|+||.||+|+++.+|+.||||+++.... .......+.+|+.+|+.++||||++++++|.
T Consensus 39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~------- 111 (350)
T 1rdq_E 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK------- 111 (350)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE-------
T ss_pred CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-------
Confidence 35899999999999999999999999999999999975321 1123467889999999999999999998873
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
+...+|+|||||+ ++|.+++...+.+++..++.++.||+.||+|||
T Consensus 112 ---------------------------------~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH 158 (350)
T 1rdq_E 112 ---------------------------------DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158 (350)
T ss_dssp ---------------------------------CSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------cCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 699999998889999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++++||+|||+++..... ....+||+.|+|||++.+ ..++.++
T Consensus 159 ~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~------------------~~~~~gt~~y~aPE~~~~-~~~~~~~ 219 (350)
T 1rdq_E 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------------------TWTLCGTPEALAPEIILS-KGYNKAV 219 (350)
T ss_dssp HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC------------------BCCCEECGGGCCHHHHTT-CCBCTHH
T ss_pred HCCcccccCccceEEECCCCCEEEcccccceeccCC------------------cccccCCccccCHHHhcC-CCCCCcC
Confidence 999999999999999999999999999999864211 234689999999999988 5689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhccC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDAL 688 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~~~ 688 (1196)
|||||||++|||++ ||......+....+......+|. ..++++.+||++||+.||.+||+ ++++++|+|
T Consensus 220 DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~ 296 (350)
T 1rdq_E 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296 (350)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred CEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcC
Confidence 99999999999996 88877666665555554444443 45679999999999999999998 999999999
Q ss_pred CCCchHHHH
Q 000993 689 PPQMEYELL 697 (1196)
Q Consensus 689 ~~~~~~~~~ 697 (1196)
|....+..+
T Consensus 297 f~~~~w~~~ 305 (350)
T 1rdq_E 297 FATTDWIAI 305 (350)
T ss_dssp GTTCCHHHH
T ss_pred cCCCCHHHH
Confidence 999887654
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-41 Score=391.94 Aligned_cols=260 Identities=23% Similarity=0.384 Sum_probs=215.6
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~ 456 (1196)
.+++|++++.||+|+||.||+|+++.+|+.||||+++.... .......+.+|..+++.+ +||||++++++|..
T Consensus 7 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~----- 81 (345)
T 3a8x_A 7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT----- 81 (345)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----
T ss_pred chhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEe-----
Confidence 35799999999999999999999999999999999986543 333456788999999988 89999999998732
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+||
T Consensus 82 -----------------------------------~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~L 126 (345)
T 3a8x_A 82 -----------------------------------ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 126 (345)
T ss_dssp -----------------------------------SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 457899999996 59999999888999999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+|||++.++++||+|||+|+...... ......+||+.|+|||++.+ ..|+.+
T Consensus 127 H~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~ 190 (345)
T 3a8x_A 127 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------DTTSTFCGTPNYIAPEILRG-EDYGFS 190 (345)
T ss_dssp HHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT---------------CCBCCCCSCGGGCCHHHHTT-CCBCTH
T ss_pred HHCCceecCCCHHHEEECCCCCEEEEeccccccccCCC---------------CcccccCCCccccCccccCC-CCCChH
Confidence 99999999999999999999999999999997532110 11245689999999999988 568999
Q ss_pred chhHHHHHHHHHhhc---CCchh---------HHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH---
Q 000993 616 ADMYSLGIVFFELWH---PFSTA---------MERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA--- 680 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~---------~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta--- 680 (1196)
+|||||||++|||++ ||... ........+......+| ...++++++||++||+.||.+||++
T Consensus 191 ~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p---~~~s~~~~~li~~lL~~dP~~R~~~~~~ 267 (345)
T 3a8x_A 191 VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP---RSLSVKAASVLKSFLNKDPKERLGCHPQ 267 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHTCSSTTTSTTCCTT
T ss_pred HhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCC---CCCCHHHHHHHHHHhcCCHhHCCCCCCc
Confidence 999999999999996 77531 11122222222233333 3456799999999999999999995
Q ss_pred ---HHHHhccCCCCchHHHH
Q 000993 681 ---TELLQDALPPQMEYELL 697 (1196)
Q Consensus 681 ---~eiL~~~~~~~~~~~~~ 697 (1196)
.++++||||.+..|+.+
T Consensus 268 ~~~~~i~~hp~f~~~~w~~~ 287 (345)
T 3a8x_A 268 TGFADIQGHPFFRNVDWDMM 287 (345)
T ss_dssp THHHHHHTSGGGTTCCHHHH
T ss_pred CCHHHHhcCCccCCCCHHHH
Confidence 89999999999988755
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-42 Score=397.30 Aligned_cols=261 Identities=28% Similarity=0.397 Sum_probs=219.0
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCcc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~ 455 (1196)
..+++|++.+.||+|+||+||+|+++.+|+.||||+++.... .......+.+|..+++.+ +||||++++++|.
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~----- 88 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ----- 88 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEE-----
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEE-----
Confidence 346899999999999999999999999999999999975321 112345678899999877 9999999998873
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
+...+|+|||||+ |+|.+++.....+++..++.++.||+.||+|
T Consensus 89 -----------------------------------~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~ 133 (345)
T 1xjd_A 89 -----------------------------------TKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQF 133 (345)
T ss_dssp -----------------------------------CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------eCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 2457899999996 5999999988899999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++++||+|||+|+...... ......+||+.|+|||++.+ ..|+.
T Consensus 134 LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~ 197 (345)
T 1xjd_A 134 LHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD---------------AKTNTFCGTPDYIAPEILLG-QKYNH 197 (345)
T ss_dssp HHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT---------------CCBCCCCSCGGGCCHHHHTT-CCBCT
T ss_pred HHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC---------------CcccCCCCCcccCChhhhcC-CCCCC
Confidence 999999999999999999999999999999997532111 11345689999999999988 56899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHH-HHHhccCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT-ELLQDALPP 690 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~-eiL~~~~~~ 690 (1196)
++|||||||++|||++ ||......+....+......+|. ..++++.+||++||+.||.+||++. ++++|+||.
T Consensus 198 ~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~ 274 (345)
T 1xjd_A 198 SVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR---WLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFR 274 (345)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGT
T ss_pred hhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCCc---ccCHHHHHHHHHHhcCCHhHcCCChHHHHcCcccc
Confidence 9999999999999996 88777666655555444433332 3567999999999999999999998 999999999
Q ss_pred CchHHHH
Q 000993 691 QMEYELL 697 (1196)
Q Consensus 691 ~~~~~~~ 697 (1196)
...|+.+
T Consensus 275 ~~~w~~l 281 (345)
T 1xjd_A 275 EINWEEL 281 (345)
T ss_dssp TCCHHHH
T ss_pred CCCHHHH
Confidence 9988754
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=391.88 Aligned_cols=261 Identities=28% Similarity=0.478 Sum_probs=215.5
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.++++|++.+.||+|+||+||+|+++.+++.||||++...... ...+.+.+|+.+++.++||||+++++++.+
T Consensus 4 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~------ 76 (323)
T 3tki_A 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRRE------ 76 (323)
T ss_dssp TTTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEEC------
T ss_pred cHhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc-chHHHHHHHHHHHHhCCCCCCCeEEEEEec------
Confidence 3678999999999999999999999999999999999754322 234568899999999999999999998732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....|+|||||++ +|.+++.....+++..++.++.||+.||+|||
T Consensus 77 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH 122 (323)
T 3tki_A 77 ----------------------------------GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122 (323)
T ss_dssp ----------------------------------SSEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCeEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4567999999975 99999988888999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++.+||+|||+++.+...... ......+||+.|+|||++.+...++.++
T Consensus 123 ~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 189 (323)
T 3tki_A 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE-------------RLLNKMCGTLPYVAPELLKRREFHAEPV 189 (323)
T ss_dssp HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE-------------CCBCSCCSCGGGSCHHHHHCSSBCHHHH
T ss_pred HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc-------------cccCCCccCcCccCcHHhccCCCCCCcc
Confidence 999999999999999999999999999999865322110 1123568999999999998754457899
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|||||||++|+|++ ||....................+.+...++.+.+||++||+.||.+|||+.++++|+||.+.
T Consensus 190 DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~ 268 (323)
T 3tki_A 190 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 268 (323)
T ss_dssp HHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred cHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhccc
Confidence 99999999999996 88655443333333333444445567788899999999999999999999999999999764
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-41 Score=397.58 Aligned_cols=262 Identities=25% Similarity=0.419 Sum_probs=216.4
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
...+++|++++.||+|+||.||+|+++.+|+.||+|++..... .......+.+|+.+|+.++|||||+++++|..
T Consensus 11 ~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~---- 86 (384)
T 4fr4_A 11 DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD---- 86 (384)
T ss_dssp CCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC----
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe----
Confidence 3446899999999999999999999999999999999974321 12234678899999999999999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|+|||||. |+|.+++.....+++..++.++.||+.||+|
T Consensus 87 ------------------------------------~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~ 130 (384)
T 4fr4_A 87 ------------------------------------EEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDY 130 (384)
T ss_dssp ------------------------------------SSEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 457899999996 5999999988899999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC--CCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PKI 612 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~~ 612 (1196)
||++||+||||||+|||++.++++||+|||+|+.+... ......+||+.|+|||++.+. ..|
T Consensus 131 LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~----------------~~~~~~~gt~~Y~aPE~~~~~~~~~~ 194 (384)
T 4fr4_A 131 LQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE----------------TQITTMAGTKPYMAPEMFSSRKGAGY 194 (384)
T ss_dssp HHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT----------------CCBCCCCSCGGGCCGGGTCCCSSCCB
T ss_pred HHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCC----------------CceeccCCCccccCCeeeccCCCCCC
Confidence 99999999999999999999999999999999864321 112456899999999998742 348
Q ss_pred CCcchhHHHHHHHHHhhc---CCchh---HHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-HHHHHh
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTA---MERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-ATELLQ 685 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~---~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-a~eiL~ 685 (1196)
+.++|||||||++|||++ ||... ................| ...++.+.+||++||+.||.+||+ ++++++
T Consensus 195 ~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p---~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 195 SFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP---SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred CccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCC---CcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 999999999999999996 77532 22222222222222333 345679999999999999999998 999999
Q ss_pred ccCCCCchHHHH
Q 000993 686 DALPPQMEYELL 697 (1196)
Q Consensus 686 ~~~~~~~~~~~~ 697 (1196)
|+||..+.|+.+
T Consensus 272 hp~f~~~~w~~~ 283 (384)
T 4fr4_A 272 FPYMNDINWDAV 283 (384)
T ss_dssp SGGGTTCCHHHH
T ss_pred ChhhhcCCHHHH
Confidence 999999988755
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=395.37 Aligned_cols=260 Identities=26% Similarity=0.381 Sum_probs=220.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~ 456 (1196)
.+++|++++.||+|+||+||+|+++.+|+.||||+++.... .......+.+|..+|+.+ +||||++++++|.
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~------ 91 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ------ 91 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEE------
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEE------
Confidence 46899999999999999999999999999999999975321 112345688999999988 8999999998873
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
....+|+|||||+ |+|.+++...+.+++..++.++.||+.||+||
T Consensus 92 ----------------------------------~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~L 137 (353)
T 2i0e_A 92 ----------------------------------TMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFL 137 (353)
T ss_dssp ----------------------------------CSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------cCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 59999999888999999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+|||++.++++||+|||+|+...... ......+||+.|+|||++.+ ..|+.+
T Consensus 138 H~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~ 201 (353)
T 2i0e_A 138 QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---------------VTTKTFCGTPDYIAPEIIAY-QPYGKS 201 (353)
T ss_dssp HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT---------------CCBCCCCSCGGGCCHHHHTT-CCBSTH
T ss_pred HHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC---------------cccccccCCccccChhhhcC-CCcCCc
Confidence 99999999999999999999999999999997532110 12345689999999999987 568999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhcc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDA 687 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~ 687 (1196)
+|||||||++|||++ ||......+....+......+|. ..++++.+||++||+.||.+|| +++++++|+
T Consensus 202 ~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~ 278 (353)
T 2i0e_A 202 VDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK---SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHA 278 (353)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSG
T ss_pred ccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCC---CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCc
Confidence 999999999999996 88877766666665554444443 4567999999999999999999 479999999
Q ss_pred CCCCchHHHH
Q 000993 688 LPPQMEYELL 697 (1196)
Q Consensus 688 ~~~~~~~~~~ 697 (1196)
||..+.|+.+
T Consensus 279 ~f~~~~w~~l 288 (353)
T 2i0e_A 279 FFRYIDWEKL 288 (353)
T ss_dssp GGTTCCHHHH
T ss_pred cccCCCHHHH
Confidence 9999988755
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-41 Score=387.27 Aligned_cols=260 Identities=26% Similarity=0.392 Sum_probs=218.2
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc----hhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----PVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~----~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
..+.|++.+.||+|+||.||+|+++.+|+.||||++....... ...+.+.+|+.+|+.++||||++++++|..
T Consensus 9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 85 (326)
T 2y0a_A 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN--- 85 (326)
T ss_dssp HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---
T ss_pred cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe---
Confidence 4467999999999999999999999999999999997654221 135678999999999999999999998732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+
T Consensus 86 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~ 128 (326)
T 2y0a_A 86 -------------------------------------KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128 (326)
T ss_dssp -------------------------------------SSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHH
Confidence 456899999996 599999988888999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCC----CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARN----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
|||++||+||||||+|||++.++ .+||+|||+++...... .....+||+.|+|||++.+
T Consensus 129 ~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~- 191 (326)
T 2y0a_A 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----------------EFKNIFGTPEFVAPEIVNY- 191 (326)
T ss_dssp HHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTS----------------CCCCCCSCTTTCCHHHHTT-
T ss_pred HHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCC----------------ccccccCCcCcCCceeecC-
Confidence 99999999999999999999887 79999999998653211 1234579999999999987
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
..++.++|||||||++|+|++ ||......+............+. .+...++.+.+||++||+.||.+|||+.++|+
T Consensus 192 ~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 568999999999999999996 88766555554444443333333 33566788999999999999999999999999
Q ss_pred ccCCCCchHH
Q 000993 686 DALPPQMEYE 695 (1196)
Q Consensus 686 ~~~~~~~~~~ 695 (1196)
||||......
T Consensus 272 hp~~~~~~~~ 281 (326)
T 2y0a_A 272 HPWIKPKDTQ 281 (326)
T ss_dssp STTTSCCSHH
T ss_pred CCCccCCcch
Confidence 9999886543
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-41 Score=408.04 Aligned_cols=261 Identities=28% Similarity=0.390 Sum_probs=208.2
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++++.||+|+||+||+|++..+|+.||||++...........++.+|+.+|+.++|||||+++++|....
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~----- 134 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK----- 134 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCC-----
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCC-----
Confidence 358999999999999999999999999999999999865445556778999999999999999999999884321
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
.......+|+|||||+++|.+.+.. .+++..++.++.||+.||+|||++
T Consensus 135 -----------------------------~~~~~~~~~lv~E~~~~~l~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~ 183 (464)
T 3ttj_A 135 -----------------------------TLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 183 (464)
T ss_dssp -----------------------------STTTCCEEEEEEECCSEEHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -----------------------------ccccCCeEEEEEeCCCCCHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHHC
Confidence 0122457899999999988888754 499999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++++||+|||+|+..... ...+..+||+.|+|||++.+ ..|+.++||
T Consensus 184 ~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~----------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di 246 (464)
T 3ttj_A 184 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS----------------FMMTPYVVTRYYRAPEVILG-MGYKENVDI 246 (464)
T ss_dssp TCCCCCCCGGGEEECTTSCEEECCCCCC-----C----------------CCC----CCCTTCCHHHHTT-CCCCTTHHH
T ss_pred CcccCCCChHhEEEeCCCCEEEEEEEeeeecCCC----------------cccCCCcccccccCHHHHcC-CCCCHHHHH
Confidence 9999999999999999999999999999864321 12345689999999999998 579999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCc---------------------------ccc-----------
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPS---------------------------WVA----------- 657 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~---------------------------~~~----------- 657 (1196)
|||||+||||++ ||.+.........++...+..++. +..
T Consensus 247 wSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (464)
T 3ttj_A 247 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 326 (464)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCccccccccccccc
Confidence 999999999996 887665544443333221111100 000
Q ss_pred -CCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 658 -KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 658 -~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
.++++.+||++||..||.+|||++++|+||||...
T Consensus 327 ~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~ 362 (464)
T 3ttj_A 327 LKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 362 (464)
T ss_dssp HHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred ccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhc
Confidence 03568999999999999999999999999999854
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-41 Score=381.76 Aligned_cols=263 Identities=27% Similarity=0.389 Sum_probs=207.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC---CchhHHHHHHHHHHHHhc---CCCCeeeeeeeeeec
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK---SLPVNDRILREVATLSRL---QHQHVVRYYQAWFET 452 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~---~~~~~~~~~~Ev~iL~~L---~HpnIV~l~~~~~e~ 452 (1196)
..++|++.+.||+|+||+||+|+++.+|+.||||++..... .......+.+|+.+++.+ +||||++++++|...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 35789999999999999999999999999999999975432 111234566777777766 499999999988542
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCC--CCHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVE 530 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~--l~e~~~~~i~~qIa~ 530 (1196)
. ......++++|||++++|.+++..... +++..++.++.||+.
T Consensus 87 ~-----------------------------------~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~ 131 (308)
T 3g33_A 87 R-----------------------------------TDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 131 (308)
T ss_dssp C-----------------------------------SSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHH
T ss_pred C-----------------------------------CCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHH
Confidence 1 012346899999999999999987654 999999999999999
Q ss_pred HHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC
Q 000993 531 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610 (1196)
Q Consensus 531 gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 610 (1196)
||+|||++||+||||||+|||++.++.+||+|||+++..... ......+||+.|+|||++.+ .
T Consensus 132 al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~----------------~~~~~~~gt~~y~aPE~~~~-~ 194 (308)
T 3g33_A 132 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ----------------MALTPVVVTLWYRAPEVLLQ-S 194 (308)
T ss_dssp HHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTTC----------------CCSGGGGCCCSSCCHHHHHT-S
T ss_pred HHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCccccccCCC----------------cccCCccccccccCchHHcC-C
Confidence 999999999999999999999999999999999999764311 11244689999999999987 5
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC------------------------ccccCCHHHH
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP------------------------SWVAKFSEQE 663 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~------------------------~~~~~~~~l~ 663 (1196)
.++.++|||||||++|||++ ||................+..+. .....++.+.
T Consensus 195 ~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (308)
T 3g33_A 195 TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGA 274 (308)
T ss_dssp CCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHH
T ss_pred CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHH
Confidence 68999999999999999997 88766655554443332211111 1124567889
Q ss_pred HHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 664 SLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 664 ~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
+||.+||+.||.+|||+.++|+|+||.+..
T Consensus 275 ~li~~~L~~dP~~R~t~~e~l~h~~~~~~~ 304 (308)
T 3g33_A 275 QLLLEMLTFNPHKRISAFRALQHSYLHKDE 304 (308)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred HHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence 999999999999999999999999998754
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-41 Score=382.08 Aligned_cols=259 Identities=24% Similarity=0.411 Sum_probs=208.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|++++.||+|+||+||+|++..+|+.||||++............+.+|+.+++.++||||++++++|..
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------- 73 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRR-------- 73 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--------
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeec--------
Confidence 578999999999999999999999999999999997665555556778899999999999999999998733
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+|||||++ +|.+++.....+++..++.++.||+.||+|||++
T Consensus 74 --------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~ 121 (311)
T 4agu_A 74 --------------------------------KRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH 121 (311)
T ss_dssp --------------------------------TTEEEEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCeEEEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3568999999986 6777777778899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+...++.++||
T Consensus 122 ~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 186 (311)
T 4agu_A 122 NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS---------------DYYDDEVATRWYRSPELLVGDTQYGPPVDV 186 (311)
T ss_dssp TEECCCCSGGGEEECTTSCEEECCCTTCEECC---------------------------GGGCCHHHHHTCSCCCTHHHH
T ss_pred CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc---------------cccCCCcCCccccChHHHhcCCCCCcchhh
Confidence 99999999999999999999999999997653221 112345789999999999875678999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-------------------CCC---------ccccCCHHHHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-------------------LPP---------SWVAKFSEQESLLR 667 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-------------------~p~---------~~~~~~~~l~~LI~ 667 (1196)
|||||++|+|++ ||.................. .+. .+...++++.+||+
T Consensus 187 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 266 (311)
T 4agu_A 187 WAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLK 266 (311)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHH
Confidence 999999999996 77655444333222111111 110 11345678999999
Q ss_pred HcccCCCCCCCCHHHHHhccCCCCch
Q 000993 668 RLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
+||+.||.+|||++++++||||.+..
T Consensus 267 ~~L~~dP~~Rpt~~ell~hp~f~~~~ 292 (311)
T 4agu_A 267 GCLHMDPTERLTCEQLLHHPYFENIR 292 (311)
T ss_dssp HHCCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred HHccCChhhcCCHHHHhcChHHHhcc
Confidence 99999999999999999999999875
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-41 Score=387.26 Aligned_cols=259 Identities=24% Similarity=0.393 Sum_probs=197.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++++.||+|+||.||+|+++.+|+.||||+++.... ......+.+|+.+++.++||||+++++++.
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------- 73 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHENIVRLYDVIH--------- 73 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCST-TCSCHHHHHHHHHHTTCCBTTBCCEEEEEC---------
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc-cccHHHHHHHHHHHHhcCCCCcceEEEEEE---------
Confidence 3689999999999999999999999999999999975432 223457889999999999999999999873
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc------CCCCHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY------DHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~------~~l~e~~~~~i~~qIa~gL~ 533 (1196)
....+|+|||||+++|.+++... ..+++..++.++.||+.||+
T Consensus 74 -------------------------------~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~ 122 (317)
T 2pmi_A 74 -------------------------------TENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122 (317)
T ss_dssp -------------------------------CTTEEEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHH
T ss_pred -------------------------------ECCeEEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHH
Confidence 24568999999999999988654 35999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+...++
T Consensus 123 ~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~ 187 (317)
T 2pmi_A 123 FCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV---------------NTFSSEVVTLWYRAPDVLMGSRTYS 187 (317)
T ss_dssp HHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCC---------------CCCCCCCSCCTTCCHHHHTTCCCCC
T ss_pred HHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCc---------------ccCCCCcccccccCchHhhCCCCCC
Confidence 9999999999999999999999999999999997643211 1123457899999999998755689
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-------------------------------CccccCC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-------------------------------PSWVAKF 659 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-------------------------------~~~~~~~ 659 (1196)
.++|||||||++|||++ ||......+.........+..+ ......+
T Consensus 188 ~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (317)
T 2pmi_A 188 TSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLD 267 (317)
T ss_dssp THHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCC
Confidence 99999999999999996 7876555444333322111100 0011356
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchH
Q 000993 660 SEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 660 ~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~ 694 (1196)
+++.+||++||+.||.+|||+.++++||||.+...
T Consensus 268 ~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 302 (317)
T 2pmi_A 268 GNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYH 302 (317)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred HHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccc
Confidence 78999999999999999999999999999987543
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-41 Score=389.50 Aligned_cols=254 Identities=22% Similarity=0.343 Sum_probs=215.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++.+.||+|+||.||+|.++.+++.||+|++... ......+.+|+.+++.++||||++++++|.+
T Consensus 3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~------- 72 (321)
T 1tki_A 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFES------- 72 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEEE-------
T ss_pred hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC---cccHHHHHHHHHHHHhCCCCCCCeEeEEEec-------
Confidence 457999999999999999999999999999999998743 2345678899999999999999999998733
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD-HFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+|||||+| +|.+++.... .+++..++.++.||+.||+|||
T Consensus 73 ---------------------------------~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH 119 (321)
T 1tki_A 73 ---------------------------------MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119 (321)
T ss_dssp ---------------------------------TTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3568999999974 9999997654 7999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecC--CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 537 GQGIIHRDLTPNNIFFDA--RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~--~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
++||+||||||+|||++. ++.+||+|||+++...... ......||+.|+|||++.+ ..++.
T Consensus 120 ~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~~~~~ 182 (321)
T 1tki_A 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD----------------NFRLLFTAPEYYAPEVHQH-DVVST 182 (321)
T ss_dssp HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC----------------EEEEEESCGGGSCHHHHTT-CEECH
T ss_pred HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC----------------ccccccCChhhcCcHHhcC-CCCCc
Confidence 999999999999999987 7899999999998653211 1234579999999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
++|||||||++|+|++ ||......+............+. .+...++++.+||++||..||.+|||+.++|+|||+.
T Consensus 183 ~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~ 262 (321)
T 1tki_A 183 ATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLK 262 (321)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred hhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhc
Confidence 9999999999999996 88777666665555544444433 4456788999999999999999999999999999987
Q ss_pred Cc
Q 000993 691 QM 692 (1196)
Q Consensus 691 ~~ 692 (1196)
+.
T Consensus 263 ~~ 264 (321)
T 1tki_A 263 QK 264 (321)
T ss_dssp SC
T ss_pred cC
Confidence 64
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-41 Score=394.63 Aligned_cols=262 Identities=26% Similarity=0.374 Sum_probs=213.3
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHH-HHhcCCCCeeeeeeeeeecCc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVAT-LSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~i-L~~L~HpnIV~l~~~~~e~~~ 454 (1196)
....++|++++.||+|+||+||+|+++.+++.||||+++..... ......+.+|..+ ++.++||||++++++|.
T Consensus 34 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~---- 109 (373)
T 2r5t_A 34 HAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQ---- 109 (373)
T ss_dssp TCCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEE----
T ss_pred CCChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEE----
Confidence 34568999999999999999999999999999999999765422 2234456777776 56789999999998873
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
+...+|+|||||+ |+|.+++.....+++..++.++.||+.||+
T Consensus 110 ------------------------------------~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~ 153 (373)
T 2r5t_A 110 ------------------------------------TADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALG 153 (373)
T ss_dssp ------------------------------------CSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------eCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 2457899999997 599999998889999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+|||++.++++||+|||+++...... ......+||+.|+|||++.+ ..|+
T Consensus 154 ~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~ 217 (373)
T 2r5t_A 154 YLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN---------------STTSTFCGTPEYLAPEVLHK-QPYD 217 (373)
T ss_dssp HHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC---------------CCCCSBSCCCCCCCHHHHTT-CCCC
T ss_pred HHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCC---------------CccccccCCccccCHHHhCC-CCCC
Confidence 9999999999999999999999999999999998532111 12345689999999999988 5699
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH----HHHHhc
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta----~eiL~~ 686 (1196)
.++|||||||++|||++ ||......+....++.....+++ ..++++++||++||+.||.+||++ .++++|
T Consensus 218 ~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h 294 (373)
T 2r5t_A 218 RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKP---NITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSH 294 (373)
T ss_dssp THHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCCS---SSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTS
T ss_pred chhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCC---CCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCC
Confidence 99999999999999996 88877666666655554444443 456799999999999999999986 799999
Q ss_pred cCCCCchHHHH
Q 000993 687 ALPPQMEYELL 697 (1196)
Q Consensus 687 ~~~~~~~~~~~ 697 (1196)
+||..+.|+.+
T Consensus 295 ~~f~~~~w~~l 305 (373)
T 2r5t_A 295 VFFSLINWDDL 305 (373)
T ss_dssp GGGTTCCHHHH
T ss_pred ccccCCCHHHH
Confidence 99999988754
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=405.97 Aligned_cols=264 Identities=23% Similarity=0.384 Sum_probs=220.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.++|+++++||+|+||+||+|+++.+++.||||+++.... .......+.+|..+++.++||||++++++|.
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~-------- 144 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ-------- 144 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE--------
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe--------
Confidence 3789999999999999999999999999999999974211 0111234788999999999999999999873
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
+...+|+|||||+ |+|.+++.. ...+++..++.++.||+.||+|||
T Consensus 145 --------------------------------~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH 192 (437)
T 4aw2_A 145 --------------------------------DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH 192 (437)
T ss_dssp --------------------------------CSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------eCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2457899999995 699999987 568999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc----CCCCC
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ----GWPKI 612 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~----~~~~~ 612 (1196)
++||+||||||+|||++.++++||+|||+|+...... ....+..+||+.|+|||++. +...|
T Consensus 193 ~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~--------------~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 258 (437)
T 4aw2_A 193 QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG--------------TVQSSVAVGTPDYISPEILQAMEGGKGRY 258 (437)
T ss_dssp HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS--------------CEECCSCCSCGGGCCHHHHHHHHTSCCEE
T ss_pred hCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCC--------------CcccccccCCcCeeChHHHhhcccCCCCC
Confidence 9999999999999999999999999999997643211 11234468999999999987 23568
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhh--cCCCCCccccCCHHHHHHHHHcccCCCCC--CCCHHHHHh
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQ--KGELPPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQ 685 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~--~~~~p~~~~~~~~~l~~LI~~cL~~dP~~--RPta~eiL~ 685 (1196)
+.++|||||||++|||++ ||......+....++.. ...+|..+...++++++||++||+.+|.+ ||+++++++
T Consensus 259 ~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 259 GPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred CCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 999999999999999996 88877666665555432 34556666678899999999999998888 999999999
Q ss_pred ccCCCCchHHHH
Q 000993 686 DALPPQMEYELL 697 (1196)
Q Consensus 686 ~~~~~~~~~~~~ 697 (1196)
||||..+.|+.+
T Consensus 339 Hpff~~i~w~~l 350 (437)
T 4aw2_A 339 HPFFSGIDWDNI 350 (437)
T ss_dssp SGGGTTCCTTTG
T ss_pred CCccCCCCHHHH
Confidence 999999988755
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-41 Score=410.71 Aligned_cols=261 Identities=29% Similarity=0.509 Sum_probs=219.8
Q ss_pred CCCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecC
Q 000993 374 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 453 (1196)
Q Consensus 374 ~~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~ 453 (1196)
...+.+.++|++++.||+|+||+||+|+++.+|+.||||++............+.+|+.+|+.++|||||++++++.+
T Consensus 15 ~~~g~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-- 92 (486)
T 3mwu_A 15 YFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-- 92 (486)
T ss_dssp TTCCHHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC--
T ss_pred cccCChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEc--
Confidence 345667899999999999999999999999999999999997543333345678999999999999999999988732
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL 532 (1196)
...+|+|||||. ++|.+.+.....+++..++.++.||+.||
T Consensus 93 --------------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al 134 (486)
T 3mwu_A 93 --------------------------------------SSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGI 134 (486)
T ss_dssp --------------------------------------SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 457899999996 59999998888999999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEec---CCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFD---ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld---~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
+|||++||+||||||+|||++ .++.+||+|||+++...... .....+||+.|+|||++.+
T Consensus 135 ~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~- 197 (486)
T 3mwu_A 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT----------------KMKDRIGTAYYIAPEVLRG- 197 (486)
T ss_dssp HHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--------------------CCTTGGGGCCGGGGGS-
T ss_pred HHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC----------------ccCCCcCCCCCCCHHHhCC-
Confidence 999999999999999999995 45679999999998653211 1234579999999999987
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC-CCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
.|+.++|||||||++|+|++ ||......+............ .+.|...++++++||++||+.||.+|||+.++|+
T Consensus 198 -~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 198 -TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 48999999999999999996 887776666555554443333 3466778899999999999999999999999999
Q ss_pred ccCCCCc
Q 000993 686 DALPPQM 692 (1196)
Q Consensus 686 ~~~~~~~ 692 (1196)
|||+.+.
T Consensus 277 hp~~~~~ 283 (486)
T 3mwu_A 277 HPWIQKY 283 (486)
T ss_dssp CHHHHHT
T ss_pred CHhhccC
Confidence 9998643
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-41 Score=382.37 Aligned_cols=254 Identities=36% Similarity=0.555 Sum_probs=206.5
Q ss_pred CCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecC
Q 000993 375 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 375 ~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~ 453 (1196)
+...+.++|++.++||+|+||+||+|+++.+|+.||||++...............|+..+..+ +||||++++++|.+
T Consensus 51 ~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~-- 128 (311)
T 3p1a_A 51 PESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE-- 128 (311)
T ss_dssp SSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--
T ss_pred ccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe--
Confidence 344556789999999999999999999999999999999876555555555666777666666 99999999998843
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL 532 (1196)
...+|+|||||+++|.+++...+ .+++..++.++.||+.||
T Consensus 129 --------------------------------------~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL 170 (311)
T 3p1a_A 129 --------------------------------------GGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLAL 170 (311)
T ss_dssp --------------------------------------TTEEEEEEECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCEEEEEEeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 45689999999999999887654 699999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||++||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.+ .+
T Consensus 171 ~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~--~~ 232 (311)
T 3p1a_A 171 AHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG----------------AGEVQEGDPRYMAPELLQG--SY 232 (311)
T ss_dssp HHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----------------------CCCCCGGGCCGGGGGT--CC
T ss_pred HHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC----------------CCcccCCCccccCHhHhcC--CC
Confidence 99999999999999999999999999999999987643211 1234579999999999986 58
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
+.++|||||||++|||++ ||....... .+. ....++ .....++++.+||.+||+.||.+|||+.++++|||
T Consensus 233 ~~~~DiwslG~il~el~~g~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~ 307 (311)
T 3p1a_A 233 GTAADVFSLGLTILEVACNMELPHGGEGWQ----QLR-QGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPV 307 (311)
T ss_dssp STHHHHHHHHHHHHHHHHTCCCCSSHHHHH----HHT-TTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCCccHHH----HHh-ccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCcc
Confidence 999999999999999996 333332221 122 222332 33456789999999999999999999999999999
Q ss_pred CCC
Q 000993 689 PPQ 691 (1196)
Q Consensus 689 ~~~ 691 (1196)
+++
T Consensus 308 ~~~ 310 (311)
T 3p1a_A 308 LRQ 310 (311)
T ss_dssp GSC
T ss_pred ccC
Confidence 975
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-42 Score=398.29 Aligned_cols=256 Identities=24% Similarity=0.363 Sum_probs=209.9
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.+.+++|.+.+.||+|+||+||+|++..+|+.||||++..... .......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~---- 80 (336)
T 3h4j_B 5 KRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITT---- 80 (336)
T ss_dssp CSEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEEC----
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEe----
Confidence 3457899999999999999999999999999999999874321 11123568899999999999999999998732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|+||||++|+|.+++.....+++.+++.++.||+.||+||
T Consensus 81 ------------------------------------~~~~~lv~E~~~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~L 124 (336)
T 3h4j_B 81 ------------------------------------PTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYC 124 (336)
T ss_dssp ------------------------------------SSEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEECCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 35689999999999999998888999999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+|||++.++.+||+|||+++...... .....+||+.|+|||++.+...++.+
T Consensus 125 H~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~~~~~ 188 (336)
T 3h4j_B 125 HRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN----------------FLKTSCGSPNYAAPEVINGKLYAGPE 188 (336)
T ss_dssp HHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB----------------TTCCCTTSTTTSCGGGSCCSGGGCHH
T ss_pred HHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc----------------ccccccCCcCcCCHHHHcCCCCCCCc
Confidence 99999999999999999999999999999997643221 12345799999999999884444789
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
+|||||||++|+|++ ||.............. .........++++.+||++||+.||.+|||+.++++||||..
T Consensus 189 ~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~---~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~ 264 (336)
T 3h4j_B 189 VDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNS---CVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNV 264 (336)
T ss_dssp HHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCS---SCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHT
T ss_pred cchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHc---CCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhcc
Confidence 999999999999996 7765432221111111 111122345679999999999999999999999999999865
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=373.43 Aligned_cols=259 Identities=25% Similarity=0.437 Sum_probs=220.1
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.+.++|++.+.||+|+||.||+|.++.+|+.||+|++............+.+|+.+++.++||||+++++++.+
T Consensus 3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 76 (284)
T 3kk8_A 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE------ 76 (284)
T ss_dssp TTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC------
T ss_pred hhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEc------
Confidence 45689999999999999999999999999999999998766666667789999999999999999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
....|+|||||++ +|.+.+.....+++..++.++.||+.||+|||
T Consensus 77 ----------------------------------~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH 122 (284)
T 3kk8_A 77 ----------------------------------ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 122 (284)
T ss_dssp ----------------------------------SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4567999999974 99999988889999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCC---eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 537 GQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~---vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
++||+||||||+||+++.++. +||+|||++....... ......||+.|+|||++.+ ..++
T Consensus 123 ~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~ 185 (284)
T 3kk8_A 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE----------------AWHGFAGTPGYLSPEVLKK-DPYS 185 (284)
T ss_dssp HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC----------------BCCCSCSCGGGCCHHHHTT-CCBC
T ss_pred HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc----------------cccCCCCCcCCcCchhhcC-CCCC
Confidence 999999999999999987665 9999999997543211 1234579999999999988 5689
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
.++||||||+++|+|++ ||...................+ +.+...++++.+||++||+.||.+|||+.++++|+|+
T Consensus 186 ~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~ 265 (284)
T 3kk8_A 186 KPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265 (284)
T ss_dssp THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHH
T ss_pred cccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccc
Confidence 99999999999999996 8876666555544444333333 3445678899999999999999999999999999998
Q ss_pred CCch
Q 000993 690 PQME 693 (1196)
Q Consensus 690 ~~~~ 693 (1196)
.+..
T Consensus 266 ~~~~ 269 (284)
T 3kk8_A 266 CNRE 269 (284)
T ss_dssp HSCC
T ss_pred cCCh
Confidence 7643
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-41 Score=391.56 Aligned_cols=262 Identities=25% Similarity=0.400 Sum_probs=209.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++++.||+|+||.||+|.+..+|+.||||++...........++.+|+.+|+.++||||+++++++.....
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~---- 98 (367)
T 1cm8_A 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDET---- 98 (367)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSS----
T ss_pred ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCc----
Confidence 3578999999999999999999999999999999987655555566789999999999999999999998743210
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
......+|+|||||+++|.+++.. ..+++..++.++.||+.||+|||++
T Consensus 99 ------------------------------~~~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~ 147 (367)
T 1cm8_A 99 ------------------------------LDDFTDFYLVMPFMGTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAA 147 (367)
T ss_dssp ------------------------------TTTCCCCEEEEECCSEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ------------------------------cccCceEEEEEecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 012245699999998899999876 6799999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++.... ..+..+||+.|+|||++.+...++.++||
T Consensus 148 ~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di 209 (367)
T 1cm8_A 148 GIIHRDLKPGNLAVNEDCELKILDFGLARQADS------------------EMTGYVVTRWYRAPEVILNWMRYTQTVDI 209 (367)
T ss_dssp TEECCCCCGGGEEECTTCCEEECCCTTCEECCS------------------SCCSSCSCGGGCCTHHHHTTTCCCTTHHH
T ss_pred CccccCcCHHHEEEcCCCCEEEEeeeccccccc------------------ccCcCcCCCCcCCHHHHhCCCCCChhhhH
Confidence 999999999999999999999999999975321 12446899999999999875679999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC----------------------------CCccccCCHHHHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL----------------------------PPSWVAKFSEQESLLR 667 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~----------------------------p~~~~~~~~~l~~LI~ 667 (1196)
|||||++|||++ ||...........+....+.. ...+...++.+.+||+
T Consensus 210 wslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 289 (367)
T 1cm8_A 210 WSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLE 289 (367)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHH
Confidence 999999999996 787655444333322211111 1122345778999999
Q ss_pred HcccCCCCCCCCHHHHHhccCCCCch
Q 000993 668 RLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
+||+.||.+|||+.++|+||||....
T Consensus 290 ~mL~~dP~~R~t~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 290 KMLVLDAEQRVTAGEALAHPYFESLH 315 (367)
T ss_dssp HHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred HHccCChhHCCCHHHHhcChHHHhhc
Confidence 99999999999999999999998764
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-41 Score=403.99 Aligned_cols=260 Identities=27% Similarity=0.385 Sum_probs=211.0
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
..++|++++.||+|+||.||+|+++.+|+.||||+++... ........+.+|+.+|+.++||||++++++|..
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~------ 219 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT------ 219 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEE------
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEee------
Confidence 3578999999999999999999999999999999997532 122334567899999999999999999998843
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||
T Consensus 220 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH 265 (446)
T 4ejn_A 220 ----------------------------------HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 265 (446)
T ss_dssp ----------------------------------TTEEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 356899999997 499999998889999999999999999999999
Q ss_pred h-CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 537 G-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 537 s-~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
+ +||+||||||+|||++.++++||+|||+|+...... ......+||+.|+|||++.+ ..|+.+
T Consensus 266 ~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~ 329 (446)
T 4ejn_A 266 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---------------ATMKTFCGTPEYLAPEVLED-NDYGRA 329 (446)
T ss_dssp HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--------------------CCSSSCGGGCCHHHHHT-SCCCTH
T ss_pred hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCC---------------cccccccCCccccCHhhcCC-CCCCCc
Confidence 8 999999999999999999999999999997532111 11245689999999999987 579999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhcc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDA 687 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~ 687 (1196)
+|||||||+||||++ ||...........+......+|. ..++++.+||.+||+.||.+|| +++++++|+
T Consensus 330 ~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp 406 (446)
T 4ejn_A 330 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR---TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHR 406 (446)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred cchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCc---cCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCc
Confidence 999999999999996 88776666555555544444443 3567999999999999999999 999999999
Q ss_pred CCCCchHHHH
Q 000993 688 LPPQMEYELL 697 (1196)
Q Consensus 688 ~~~~~~~~~~ 697 (1196)
||..+.++.+
T Consensus 407 ~f~~~~~~~~ 416 (446)
T 4ejn_A 407 FFAGIVWQHV 416 (446)
T ss_dssp GGTTCCHHHH
T ss_pred cccCCCHHHH
Confidence 9999877643
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=397.15 Aligned_cols=284 Identities=24% Similarity=0.359 Sum_probs=213.2
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.....++|++.+.||+|+||.||+|+++.+|+.||||++...........++.+|+.+|+.++||||+++++++....
T Consensus 21 ~~~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-- 98 (432)
T 3n9x_A 21 NVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDD-- 98 (432)
T ss_dssp GCCCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSC--
T ss_pred cceecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCC--
Confidence 344568999999999999999999999999999999999765555556678999999999999999999999874321
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
......+|+|||||+++|.+++.....+++..++.++.||+.||+||
T Consensus 99 ---------------------------------~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~L 145 (432)
T 3n9x_A 99 ---------------------------------LLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFI 145 (432)
T ss_dssp ---------------------------------TTTCCCEEEEEECCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCcCCeEEEEEecCCcCHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 01235689999999999999999888899999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCC-------CCCCCCCccccCcCccccccCCCchhccC
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA-------FPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
|++||+||||||+|||++.++.+||+|||+|+............ ............+..+||+.|+|||++..
T Consensus 146 H~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~ 225 (432)
T 3n9x_A 146 HESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILL 225 (432)
T ss_dssp HHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTT
T ss_pred HHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhc
Confidence 99999999999999999999999999999998764322110000 00000000112356789999999999765
Q ss_pred CCCCCCcchhHHHHHHHHHhhc-------------CC-chhH-----------------HHHHHHHH-------------
Q 000993 609 WPKIDEKADMYSLGIVFFELWH-------------PF-STAM-----------------ERQIVLSD------------- 644 (1196)
Q Consensus 609 ~~~~s~ksDVwSlGviLyELlt-------------Pf-~~~~-----------------~~~~~~~~------------- 644 (1196)
...|+.++|||||||++|||++ |+ .+.. .......+
T Consensus 226 ~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~ 305 (432)
T 3n9x_A 226 QENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLK 305 (432)
T ss_dssp CSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHH
T ss_pred CCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHH
Confidence 5679999999999999999994 21 1110 00111000
Q ss_pred ----------hhhcC-CCCC----ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchH
Q 000993 645 ----------LKQKG-ELPP----SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 645 ----------l~~~~-~~p~----~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~ 694 (1196)
+.... ..+. .+...++++.+||++||+.||.+|||++++|+||||.+..+
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 370 (432)
T 3n9x_A 306 NINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRK 370 (432)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCC
T ss_pred hccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccC
Confidence 00000 0110 12456789999999999999999999999999999998643
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=383.47 Aligned_cols=260 Identities=28% Similarity=0.419 Sum_probs=209.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCC--CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 453 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~ 453 (1196)
..++|++.+.||+|+||.||+|++. .+|+.||||+++.... .......+.+|+.+|+.++||||++++++|..
T Consensus 15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-- 92 (327)
T 3a62_A 15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT-- 92 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC--
T ss_pred CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc--
Confidence 3578999999999999999999985 6899999999975432 12234567889999999999999999988732
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL 532 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||
T Consensus 93 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al 134 (327)
T 3a62_A 93 --------------------------------------GGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMAL 134 (327)
T ss_dssp --------------------------------------SSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 346799999997 59999999888999999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||++||+||||||+|||++.++++||+|||+++...... ......+||+.|+|||++.+ ..+
T Consensus 135 ~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~ 198 (327)
T 3a62_A 135 GHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG---------------TVTHTFCGTIEYMAPEILMR-SGH 198 (327)
T ss_dssp HHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC-------------------------CTTSSCCTTSCHHHHTT-SCC
T ss_pred HHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCC---------------ccccccCCCcCccCHhhCcC-CCC
Confidence 99999999999999999999999999999999997532111 01234579999999999987 568
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHH
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELL 684 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL 684 (1196)
+.++|||||||++|||++ ||..................+|+ ..++++.+||++||..||.+|| ++.+++
T Consensus 199 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l 275 (327)
T 3a62_A 199 NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP---YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQ 275 (327)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCT---TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHH
T ss_pred CCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC---CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHH
Confidence 999999999999999996 88776666555555554444443 3567999999999999999999 899999
Q ss_pred hccCCCCchHHHH
Q 000993 685 QDALPPQMEYELL 697 (1196)
Q Consensus 685 ~~~~~~~~~~~~~ 697 (1196)
+||||....++.+
T Consensus 276 ~hp~f~~~~~~~~ 288 (327)
T 3a62_A 276 AHPFFRHINWEEL 288 (327)
T ss_dssp HSGGGSSCCHHHH
T ss_pred cCCcccCCCHHHH
Confidence 9999999877643
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-41 Score=402.29 Aligned_cols=263 Identities=23% Similarity=0.371 Sum_probs=216.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.++|++++.||+|+||+||+|+++.+++.||+|+++.... .......+.+|+.+++.++|||||+++++|.
T Consensus 68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~-------- 139 (410)
T 3v8s_A 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ-------- 139 (410)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEE--------
T ss_pred ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE--------
Confidence 4789999999999999999999999999999999964211 0111234788999999999999999998873
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
+...+|+|||||+ |+|.+++.. ..+++..++.++.||+.||+|||+
T Consensus 140 --------------------------------~~~~~~lV~E~~~gg~L~~~l~~-~~~~e~~~~~~~~qi~~aL~~LH~ 186 (410)
T 3v8s_A 140 --------------------------------DDRYLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHS 186 (410)
T ss_dssp --------------------------------CSSEEEEEECCCTTEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------ECCEEEEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 599998865 469999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC---CCC
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK---IDE 614 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~---~s~ 614 (1196)
+||+||||||+|||++.++++||+|||+|+...... .....+.+||+.|+|||++.+... |+.
T Consensus 187 ~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~--------------~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~ 252 (410)
T 3v8s_A 187 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGR 252 (410)
T ss_dssp TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS--------------EEECCSCCSCGGGCCHHHHHTTTTTCEEET
T ss_pred CCeEeccCCHHHeeECCCCCEEEeccceeEeeccCC--------------cccccCCcCCccccCHHHhhccCCCcCCCC
Confidence 999999999999999999999999999997643221 112345689999999999987432 789
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-CCCccccCCHHHHHHHHHcccCCCCC--CCCHHHHHhccC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LPPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQDAL 688 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-~p~~~~~~~~~l~~LI~~cL~~dP~~--RPta~eiL~~~~ 688 (1196)
++|||||||+||||++ ||...........++..... ..+.+...++++++||++||+.+|.+ ||++++|++|+|
T Consensus 253 ~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~ 332 (410)
T 3v8s_A 253 ECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 332 (410)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGG
T ss_pred cceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCcc
Confidence 9999999999999996 88877666665555443211 22334467789999999999999988 999999999999
Q ss_pred CCCchHHHH
Q 000993 689 PPQMEYELL 697 (1196)
Q Consensus 689 ~~~~~~~~~ 697 (1196)
|.+..|...
T Consensus 333 f~~~~w~~~ 341 (410)
T 3v8s_A 333 FKNDQWAWE 341 (410)
T ss_dssp GCCSSCCST
T ss_pred ccCCCHHHH
Confidence 999876544
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-41 Score=406.73 Aligned_cols=258 Identities=28% Similarity=0.516 Sum_probs=214.4
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
+...+.|++++.||+|+||+||+|+++.++..||||++............+.+|+.+|+.++|||||+++++|.+
T Consensus 33 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----- 107 (494)
T 3lij_A 33 GHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFED----- 107 (494)
T ss_dssp CCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEEC-----
T ss_pred CchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-----
Confidence 344568999999999999999999999999999999998655444445678999999999999999999998732
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|+|||||+ |+|.+.+.....+++..++.++.||+.||+||
T Consensus 108 -----------------------------------~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~l 152 (494)
T 3lij_A 108 -----------------------------------KRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYL 152 (494)
T ss_dssp -----------------------------------SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 456899999996 59999998888999999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCC---CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 536 HGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
|++||+||||||+|||++.. +.+||+|||+|+...... .....+||+.|+|||++.+ .|
T Consensus 153 H~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~----------------~~~~~~gt~~y~aPE~l~~--~~ 214 (494)
T 3lij_A 153 HKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK----------------KMKERLGTAYYIAPEVLRK--KY 214 (494)
T ss_dssp HHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB----------------CBCCCCSCTTTCCHHHHTT--CB
T ss_pred HHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc----------------cccccCCCcCeeCHHHHcc--cC
Confidence 99999999999999999764 459999999998653221 1234579999999999875 58
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
+.++|||||||++|+|++ ||......+............+ +.|...++.+.+||++||+.||.+|||+.++|+|||
T Consensus 215 ~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~ 294 (494)
T 3lij_A 215 DEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPW 294 (494)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHH
T ss_pred CCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcc
Confidence 999999999999999996 8887776666555555444433 456678899999999999999999999999999999
Q ss_pred CCCc
Q 000993 689 PPQM 692 (1196)
Q Consensus 689 ~~~~ 692 (1196)
+.+.
T Consensus 295 ~~~~ 298 (494)
T 3lij_A 295 IKEM 298 (494)
T ss_dssp HHHH
T ss_pred cccC
Confidence 8764
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=387.03 Aligned_cols=271 Identities=22% Similarity=0.398 Sum_probs=215.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.+++|++++.||+|+||.||+|+++.+|+.||||++............+.+|+.+++.++||||+++++++......
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--- 91 (351)
T 3mi9_A 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASP--- 91 (351)
T ss_dssp BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccc---
Confidence 46899999999999999999999999999999999876655444456788999999999999999999988543100
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
.......+|+|||||+++|.+.+... ..+++..++.++.||+.||+|||+
T Consensus 92 -----------------------------~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~ 142 (351)
T 3mi9_A 92 -----------------------------YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR 142 (351)
T ss_dssp ----------------------------------CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------cccCCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 00124578999999999988887654 579999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++.+||+|||+|+.+....... ........||+.|+|||++.+...++.++|
T Consensus 143 ~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~-----------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~D 211 (351)
T 3mi9_A 143 NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ-----------PNRYTNRVVTLWYRPPELLLGERDYGPPID 211 (351)
T ss_dssp TTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSS-----------CCCCCSSCSCGGGCCHHHHTTCCSCCTHHH
T ss_pred CCeeCCCCCHHHEEEcCCCCEEEccchhccccccccccc-----------ccccCCcccccCccCchhhcCCCCCCcHhH
Confidence 999999999999999999999999999998654221110 112345689999999999987566899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCc-ccc----------------------------CCHHHHHH
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPS-WVA----------------------------KFSEQESL 665 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~-~~~----------------------------~~~~l~~L 665 (1196)
||||||++|||++ ||................+..++. +.. .++.+.+|
T Consensus 212 iwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 291 (351)
T 3mi9_A 212 LWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDL 291 (351)
T ss_dssp HHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHH
Confidence 9999999999997 777665544444333323332221 111 15678999
Q ss_pred HHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 666 LRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 666 I~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|++||+.||.+|||+.++|+|+||...
T Consensus 292 i~~~L~~dP~~R~t~~e~l~hp~f~~~ 318 (351)
T 3mi9_A 292 IDKLLVLDPAQRIDSDDALNHDFFWSD 318 (351)
T ss_dssp HHHHSCSSGGGSCCHHHHHTSGGGGSS
T ss_pred HHHHhcCChhhCCCHHHHhCCCCcCCC
Confidence 999999999999999999999999764
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=389.15 Aligned_cols=258 Identities=27% Similarity=0.404 Sum_probs=201.5
Q ss_pred CCCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecC
Q 000993 374 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 453 (1196)
Q Consensus 374 ~~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~ 453 (1196)
.+.....++|++++.||+|+||+||+|+++.+|+.||||++...... ...+.+|+.+++.++||||++++++|..
T Consensus 13 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~-- 87 (361)
T 3uc3_A 13 MPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI---DENVQREIINHRSLRHPNIVRFKEVILT-- 87 (361)
T ss_dssp CCCCCCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS---CHHHHHHHHHHHHCCCTTBCCEEEEEEC--
T ss_pred ccCCCCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc---cHHHHHHHHHHHhCCCCCCCcEEEEEee--
Confidence 34445568999999999999999999999999999999999754332 3568899999999999999999998842
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL 532 (1196)
...+|+|||||+ ++|.+++...+++++..++.++.||+.||
T Consensus 88 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L 129 (361)
T 3uc3_A 88 --------------------------------------PTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGV 129 (361)
T ss_dssp --------------------------------------SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCEEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 456899999996 59999998888999999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCC--eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARND--IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~--vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 610 (1196)
+|||++||+||||||+|||++.++. +||+|||+++...... .....+||+.|+|||++.+..
T Consensus 130 ~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~ 193 (361)
T 3uc3_A 130 SYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS----------------QPKSTVGTPAYIAPEVLLRQE 193 (361)
T ss_dssp HHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-------------------------------CTTSCHHHHHCSS
T ss_pred HHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC----------------CCCCCcCCCCcCChhhhcCCC
Confidence 9999999999999999999987765 9999999997432111 123457999999999998844
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhHH----HHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHH
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAME----RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 683 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~~----~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ei 683 (1196)
..+.++|||||||++|+|++ ||..... .............. +.....++++.+||++||+.||.+|||+.++
T Consensus 194 ~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 272 (361)
T 3uc3_A 194 YDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSI-PDDIRISPECCHLISRIFVADPATRISIPEI 272 (361)
T ss_dssp CCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCC-CTTSCCCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred CCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCC-CCcCCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 33455999999999999996 7865433 22222222222222 3334567899999999999999999999999
Q ss_pred HhccCCCC
Q 000993 684 LQDALPPQ 691 (1196)
Q Consensus 684 L~~~~~~~ 691 (1196)
++|+||.+
T Consensus 273 l~hp~f~~ 280 (361)
T 3uc3_A 273 KTHSWFLK 280 (361)
T ss_dssp HTSHHHHT
T ss_pred HhCcchhc
Confidence 99999854
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-41 Score=391.18 Aligned_cols=258 Identities=25% Similarity=0.446 Sum_probs=210.2
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC---CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD---KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~---~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.+.++|++.+.||+|+||+||+|+++.+|+.||||++.... ......+.+.+|+.+++.++||||++++++|.+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~--- 97 (351)
T 3c0i_A 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS--- 97 (351)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEE---
T ss_pred ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEe---
Confidence 34578999999999999999999999999999999996432 111235678999999999999999999998733
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----CCCCHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----DHFDKELAWHLFRQIV 529 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----~~l~e~~~~~i~~qIa 529 (1196)
...+|+|||||+ ++|.+.+... ..+++..++.++.||+
T Consensus 98 -------------------------------------~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~ 140 (351)
T 3c0i_A 98 -------------------------------------DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140 (351)
T ss_dssp -------------------------------------TTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------CCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHH
Confidence 456899999997 5898877543 3589999999999999
Q ss_pred HHHHHHHhCCCcccCCCcCcEEecCCCC---eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhc
Q 000993 530 EGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 606 (1196)
Q Consensus 530 ~gL~yLHs~gIiHrDLKp~NILld~~~~---vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 606 (1196)
.||+|||++||+||||||+|||++.++. +||+|||+++...... ......+||+.|+|||++
T Consensus 141 ~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~ 205 (351)
T 3c0i_A 141 EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG---------------LVAGGRVGTPHFMAPEVV 205 (351)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTS---------------CBCCCCCSCGGGCCHHHH
T ss_pred HHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCC---------------eeecCCcCCcCccCHHHH
Confidence 9999999999999999999999987655 9999999998653211 112345899999999999
Q ss_pred cCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCCHHH
Q 000993 607 QGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATE 682 (1196)
Q Consensus 607 ~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~e 682 (1196)
.+ ..|+.++|||||||++|+|++ ||..... .............+ ..+...++++.+||++||+.||.+|||+.+
T Consensus 206 ~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e 283 (351)
T 3c0i_A 206 KR-EPYGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYE 283 (351)
T ss_dssp TT-CCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred cC-CCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-HHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHH
Confidence 87 568999999999999999996 8876433 23333333233333 345567889999999999999999999999
Q ss_pred HHhccCCCCc
Q 000993 683 LLQDALPPQM 692 (1196)
Q Consensus 683 iL~~~~~~~~ 692 (1196)
+++|+|+...
T Consensus 284 ~l~hp~~~~~ 293 (351)
T 3c0i_A 284 ALNHPWLKER 293 (351)
T ss_dssp HHTSHHHHTH
T ss_pred HhcChhhcCC
Confidence 9999998754
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-40 Score=374.44 Aligned_cols=258 Identities=27% Similarity=0.450 Sum_probs=211.0
Q ss_pred CCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 375 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 375 ~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.++...++|.+.+.||+|+||.||+|+++.++..+|+|++..... ....+.+.+|+.+|+.++||||++++++|.+
T Consensus 16 ~~g~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 91 (285)
T 3is5_A 16 FQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS-QVPMEQIEAEIEVLKSLDHPNIIKIFEVFED--- 91 (285)
T ss_dssp ESSCHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---
T ss_pred CCCChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc-chhHHHHHHHHHHHHhCCCchHHhHHHheec---
Confidence 345667899999999999999999999999999999999975432 2345778999999999999999999998732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh----cCCCCHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFRQIV 529 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~qIa 529 (1196)
...+|+|||||++ +|.+.+.. ...+++..++.++.||+
T Consensus 92 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~ 134 (285)
T 3is5_A 92 -------------------------------------YHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMM 134 (285)
T ss_dssp -------------------------------------SSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------CCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHH
Confidence 4568999999974 99988854 36799999999999999
Q ss_pred HHHHHHHhCCCcccCCCcCcEEe---cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhc
Q 000993 530 EGLAHIHGQGIIHRDLTPNNIFF---DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 606 (1196)
Q Consensus 530 ~gL~yLHs~gIiHrDLKp~NILl---d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 606 (1196)
.||+|||++||+||||||+|||+ +.++.+||+|||+++...... ......||+.|+|||++
T Consensus 135 ~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~~t~~y~aPE~~ 198 (285)
T 3is5_A 135 NALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE----------------HSTNAAGTALYMAPEVF 198 (285)
T ss_dssp HHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--------------------------CTTGGGCCHHHH
T ss_pred HHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc----------------cCcCcccccCcCChHHh
Confidence 99999999999999999999999 445789999999997643221 12345799999999998
Q ss_pred cCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHH
Q 000993 607 QGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 683 (1196)
Q Consensus 607 ~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ei 683 (1196)
.+ .++.++|||||||++|||++ ||...................+......++++.+||++||+.||.+|||+.++
T Consensus 199 ~~--~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~ 276 (285)
T 3is5_A 199 KR--DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQV 276 (285)
T ss_dssp TT--CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred cc--CCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 75 58999999999999999996 88776655555444444444444445567899999999999999999999999
Q ss_pred HhccCCCC
Q 000993 684 LQDALPPQ 691 (1196)
Q Consensus 684 L~~~~~~~ 691 (1196)
++|+||++
T Consensus 277 l~hp~f~~ 284 (285)
T 3is5_A 277 LHHEWFKQ 284 (285)
T ss_dssp HTSGGGGC
T ss_pred hcCHHhhc
Confidence 99999975
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=392.91 Aligned_cols=267 Identities=20% Similarity=0.288 Sum_probs=211.6
Q ss_pred cCCceEEeeeccC--CcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 380 LNDFEELQPLGHG--GFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 380 ~~~y~~~~~LG~G--~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.++|++++.||+| +||.||+|+++.+|+.||||+++...........+.+|+.+++.++|||||+++++|.+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------ 97 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA------ 97 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE------
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEE------
Confidence 4689999999999 99999999999999999999998766666667788899999999999999999998843
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|+|||||+ ++|.+++... ..+++..++.++.||+.||+|
T Consensus 98 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~ 143 (389)
T 3gni_B 98 ----------------------------------DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDY 143 (389)
T ss_dssp ----------------------------------TTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHH
Confidence 356899999997 5999999765 679999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC-CCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKID 613 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~s 613 (1196)
||++||+||||||+|||++.++.+||+|||++............ ........+||+.|+|||++.+. ..|+
T Consensus 144 LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 215 (389)
T 3gni_B 144 IHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRV--------VHDFPKYSVKVLPWLSPEVLQQNLQGYD 215 (389)
T ss_dssp HHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSC--------BCCCCTTCTTTGGGSCHHHHSTTSSCBC
T ss_pred HHhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccccccc--------cccccccccccccccCHHHHhccCCCCC
Confidence 99999999999999999999999999999998765322111100 00112345799999999999873 4589
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC----------------------------------------
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE---------------------------------------- 650 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~---------------------------------------- 650 (1196)
.++|||||||++|||++ ||............+.....
T Consensus 216 ~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (389)
T 3gni_B 216 AKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNG 295 (389)
T ss_dssp THHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC----------------------------------------------
T ss_pred cHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccC
Confidence 99999999999999996 77654333222221110000
Q ss_pred ---CCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchH
Q 000993 651 ---LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 651 ---~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~ 694 (1196)
..+.+...++++.+||++||+.||.+|||+.++|+|+||.+...
T Consensus 296 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~ 342 (389)
T 3gni_B 296 DSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKR 342 (389)
T ss_dssp ----------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC--
T ss_pred CCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhh
Confidence 00122345678999999999999999999999999999987754
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-41 Score=400.00 Aligned_cols=263 Identities=25% Similarity=0.403 Sum_probs=215.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.++|++++.||+|+||+||+|+++.+|+.||||+++.... .......+.+|..++..++||||++++++|.
T Consensus 60 ~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~-------- 131 (412)
T 2vd5_A 60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ-------- 131 (412)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE--------
T ss_pred hhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe--------
Confidence 4789999999999999999999999999999999974221 1112235788999999999999999998873
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
+..++|+|||||+ |+|.+++.+. ..+++..++.++.||+.||+|||
T Consensus 132 --------------------------------~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH 179 (412)
T 2vd5_A 132 --------------------------------DENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH 179 (412)
T ss_dssp --------------------------------CSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------eCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2457899999995 6999999875 47999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC------CC
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG------WP 610 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~------~~ 610 (1196)
++||+||||||+|||++.++++||+|||+|+...... .......+||+.|+|||++.+ ..
T Consensus 180 ~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~--------------~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~ 245 (412)
T 2vd5_A 180 RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG--------------TVRSLVAVGTPDYLSPEILQAVGGGPGTG 245 (412)
T ss_dssp HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS--------------CEECSSCCSCGGGCCHHHHHHHHTCTTCS
T ss_pred HCCeeecccCHHHeeecCCCCEEEeechhheeccCCC--------------ccccceeccccCcCCHHHHhhcccCcCCC
Confidence 9999999999999999999999999999998653211 111234689999999999873 24
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhh--cCCCCCccccCCHHHHHHHHHcccCCCCCC---CCHHH
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQ--KGELPPSWVAKFSEQESLLRRLMSPSPSDR---PSATE 682 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~--~~~~p~~~~~~~~~l~~LI~~cL~~dP~~R---Pta~e 682 (1196)
.|+.++|||||||++|||++ ||......+....+... ...+|......++++++||++||+ +|.+| |++++
T Consensus 246 ~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~e 324 (412)
T 2vd5_A 246 SYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGD 324 (412)
T ss_dssp EECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHH
T ss_pred CCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHH
Confidence 58999999999999999996 88877666655554432 233444445678899999999999 99998 59999
Q ss_pred HHhccCCCCchHHHH
Q 000993 683 LLQDALPPQMEYELL 697 (1196)
Q Consensus 683 iL~~~~~~~~~~~~~ 697 (1196)
+++|+||..+.|+.+
T Consensus 325 i~~Hpff~~i~w~~l 339 (412)
T 2vd5_A 325 FRTHPFFFGLDWDGL 339 (412)
T ss_dssp HHTSGGGTTCCSTTS
T ss_pred HhcCCCcCCCCHHHH
Confidence 999999999988754
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-41 Score=378.88 Aligned_cols=257 Identities=24% Similarity=0.373 Sum_probs=203.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc------------------------hhHHHHHHHHHHH
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL------------------------PVNDRILREVATL 434 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~------------------------~~~~~~~~Ev~iL 434 (1196)
.+++|++.+.||+|+||.||+|++..+|+.||||++....... ...+.+.+|+.+|
T Consensus 11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 90 (298)
T 2zv2_A 11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL 90 (298)
T ss_dssp EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence 4689999999999999999999999999999999997543211 1235688999999
Q ss_pred HhcCCCCeeeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc
Q 000993 435 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY 513 (1196)
Q Consensus 435 ~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~ 513 (1196)
+.++||||+++++++.+. ....+|+|||||++ +|.+++ ..
T Consensus 91 ~~l~h~~iv~~~~~~~~~--------------------------------------~~~~~~lv~e~~~~~~l~~~~-~~ 131 (298)
T 2zv2_A 91 KKLDHPNVVKLVEVLDDP--------------------------------------NEDHLYMVFELVNQGPVMEVP-TL 131 (298)
T ss_dssp HTCCCTTBCCEEEEEECS--------------------------------------SSSEEEEEEECCTTCBSCCSS-CS
T ss_pred HhCCCCCCCeEEEEEEcC--------------------------------------CCCEEEEEEecCCCCcHHHHh-hc
Confidence 999999999999987431 24578999999974 776654 34
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcC
Q 000993 514 DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTG 593 (1196)
Q Consensus 514 ~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (1196)
..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...... .....
T Consensus 132 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~ 196 (298)
T 2zv2_A 132 KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD---------------ALLSN 196 (298)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECSSSS---------------CEECC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCCEEEecCCCcccccccc---------------ccccC
Confidence 579999999999999999999999999999999999999999999999999997643211 01234
Q ss_pred ccccccCCCchhccCCCC--CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHH
Q 000993 594 QVGTYFYTAPEIEQGWPK--IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRR 668 (1196)
Q Consensus 594 ~~GT~~Y~APE~l~~~~~--~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~ 668 (1196)
..||+.|+|||++.+... ++.++|||||||++|||++ ||.................. .+.....++++.+||.+
T Consensus 197 ~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~ 275 (298)
T 2zv2_A 197 TVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALE-FPDQPDIAEDLKDLITR 275 (298)
T ss_dssp CCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-CCSSSCCCHHHHHHHHH
T ss_pred CcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCC-CCCccccCHHHHHHHHH
Confidence 579999999999987432 4788999999999999996 88765544433333322222 23344567899999999
Q ss_pred cccCCCCCCCCHHHHHhccCCC
Q 000993 669 LMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
||+.||.+|||+.++++||||.
T Consensus 276 ~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 276 MLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp HTCSCTTTSCCHHHHTTCHHHH
T ss_pred HhhcChhhCCCHHHHhcCcccc
Confidence 9999999999999999999874
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-40 Score=403.48 Aligned_cols=259 Identities=27% Similarity=0.508 Sum_probs=215.3
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc-----------hhHHHHHHHHHHHHhcCCCCeee
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-----------PVNDRILREVATLSRLQHQHVVR 444 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-----------~~~~~~~~Ev~iL~~L~HpnIV~ 444 (1196)
.+...++|.++++||+|+||+||+|+++.+++.||||++....... ...+.+.+|+.+|+.++|||||+
T Consensus 31 ~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~ 110 (504)
T 3q5i_A 31 EGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIK 110 (504)
T ss_dssp CSCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCC
T ss_pred CCCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCe
Confidence 3455689999999999999999999999999999999997543221 23567899999999999999999
Q ss_pred eeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHH
Q 000993 445 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWH 523 (1196)
Q Consensus 445 l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~ 523 (1196)
++++|. +...+|+|||||+ ++|.+.+.....+++..++.
T Consensus 111 ~~~~~~----------------------------------------~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~ 150 (504)
T 3q5i_A 111 LFDVFE----------------------------------------DKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN 150 (504)
T ss_dssp EEEEEE----------------------------------------CSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHH
T ss_pred EEEEEE----------------------------------------cCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHH
Confidence 999873 2457899999996 59999998888999999999
Q ss_pred HHHHHHHHHHHHHhCCCcccCCCcCcEEecCCC---CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccC
Q 000993 524 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFY 600 (1196)
Q Consensus 524 i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~---~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y 600 (1196)
++.||+.||+|||++||+||||||+|||++.++ .+||+|||+|+...... .....+||+.|
T Consensus 151 i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y 214 (504)
T 3q5i_A 151 IMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY----------------KLRDRLGTAYY 214 (504)
T ss_dssp HHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTS----------------CBCCCCSCTTT
T ss_pred HHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCC----------------ccccccCCcCC
Confidence 999999999999999999999999999998876 69999999998653211 12345799999
Q ss_pred CCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCC
Q 000993 601 TAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSD 676 (1196)
Q Consensus 601 ~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~ 676 (1196)
+|||++.+ .|+.++|||||||++|+|++ ||......+............+ +.|...++++++||++||+.||.+
T Consensus 215 ~aPE~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~ 292 (504)
T 3q5i_A 215 IAPEVLKK--KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNK 292 (504)
T ss_dssp CCHHHHTT--CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTT
T ss_pred CCHHHhcc--CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhH
Confidence 99999875 58999999999999999996 8887766666555544333333 345677889999999999999999
Q ss_pred CCCHHHHHhccCCCCc
Q 000993 677 RPSATELLQDALPPQM 692 (1196)
Q Consensus 677 RPta~eiL~~~~~~~~ 692 (1196)
|||+.++|+|||+...
T Consensus 293 R~t~~e~l~h~~~~~~ 308 (504)
T 3q5i_A 293 RCTAEEALNSRWIKKY 308 (504)
T ss_dssp SCCHHHHHTSHHHHHT
T ss_pred CCCHHHHhcCHhhhhc
Confidence 9999999999998543
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-40 Score=369.71 Aligned_cols=256 Identities=24% Similarity=0.374 Sum_probs=214.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
..|.+.+.||+|+||.||+|.+..++..||+|++............+.+|+.+++.++||||++++++|....
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------- 98 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV------- 98 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES-------
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecccc-------
Confidence 4588999999999999999999999999999999876666666778999999999999999999999874321
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
.....+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++|
T Consensus 99 -----------------------------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 149 (290)
T 1t4h_A 99 -----------------------------KGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT 149 (290)
T ss_dssp -----------------------------SSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred -----------------------------CCCceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 12467899999996 599999998889999999999999999999999999
Q ss_pred --CcccCCCcCcEEec-CCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 540 --IIHRDLTPNNIFFD-ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 540 --IiHrDLKp~NILld-~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
|+||||||+|||++ .++.+||+|||++...... ......||+.|+|||++.+ .++.++
T Consensus 150 ~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~-----------------~~~~~~~t~~y~aPE~~~~--~~~~~~ 210 (290)
T 1t4h_A 150 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-----------------FAKAVIGTPEFMAPEMYEE--KYDESV 210 (290)
T ss_dssp SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT-----------------SBEESCSSCCCCCGGGGGT--CCCTHH
T ss_pred CCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc-----------------ccccccCCcCcCCHHHHhc--cCCCcc
Confidence 99999999999998 7899999999999753211 1233579999999999876 489999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
|||||||++|+|++ ||...................+......++++.+||.+||+.||.+|||+.++++|+||++
T Consensus 211 Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~ 288 (290)
T 1t4h_A 211 DVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp HHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred hHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence 99999999999996 8876555444444444332322333445678999999999999999999999999999975
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-41 Score=385.37 Aligned_cols=258 Identities=25% Similarity=0.395 Sum_probs=203.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|.+++.||+|+||+||+|+++.+++.||||+++..... .....+.+|+.+|+.++||||+++++++..
T Consensus 1 l~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 71 (324)
T 3mtl_A 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHT-------- 71 (324)
T ss_dssp CCSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEEC--------
T ss_pred CCceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhHHHHHHHHHhcCCCCCCeeeeEEee--------
Confidence 46899999999999999999999999999999998643321 111245579999999999999999998732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+|||||+++|.+++.... .+++..++.++.||+.||+|||++
T Consensus 72 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 119 (324)
T 3mtl_A 72 --------------------------------EKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119 (324)
T ss_dssp --------------------------------SSCEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCEEEEEecccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 34579999999999999887654 599999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+...++.++||
T Consensus 120 ~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di 184 (324)
T 3mtl_A 120 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT---------------KTYDNEVVTLWYRPPDILLGSTDYSTQIDM 184 (324)
T ss_dssp TEEESSCCGGGEEECTTCCEEECSSSEEECC---------------------------CGGGCCHHHHTTCCCCCTHHHH
T ss_pred CccCCCcCHHHEEECCCCCEEEccCcccccccCCc---------------cccccccCcccccChhhhcCCCCCCcHHHH
Confidence 99999999999999999999999999997543211 112345789999999999876678999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-C--------------------------ccccCCHHHHHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-P--------------------------SWVAKFSEQESLLRR 668 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~--------------------------~~~~~~~~l~~LI~~ 668 (1196)
|||||++|+|++ ||......+.........+..+ . .....++++.+||++
T Consensus 185 wslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 264 (324)
T 3mtl_A 185 WGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTK 264 (324)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHH
Confidence 999999999996 8876655544433332211111 0 112346788999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCch
Q 000993 669 LMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||+.||.+|||++++|+||||....
T Consensus 265 ~L~~dP~~R~t~~e~l~hp~f~~~~ 289 (324)
T 3mtl_A 265 LLQFEGRNRISAEDAMKHPFFLSLG 289 (324)
T ss_dssp HSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred HcCcCcccCCCHHHHhcChhhhhcc
Confidence 9999999999999999999998754
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-41 Score=406.04 Aligned_cols=258 Identities=30% Similarity=0.550 Sum_probs=220.0
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
..+.++|++.+.||+|+||.||+|+++.+|+.||||++...... ......+.+|+.+++.++|||||+++++|.+
T Consensus 22 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~---- 97 (484)
T 3nyv_A 22 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED---- 97 (484)
T ss_dssp CCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEEC----
T ss_pred CcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEe----
Confidence 34567899999999999999999999999999999999765432 3346789999999999999999999998732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|+|||||. ++|.+.+.....+++..++.++.||+.||+|
T Consensus 98 ------------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~ 141 (484)
T 3nyv_A 98 ------------------------------------KGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 141 (484)
T ss_dssp ------------------------------------SSEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 457899999996 5999999988899999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEe---cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFF---DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILl---d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
||++||+||||||+|||+ +.++.+||+|||+++...... .....+||+.|+|||++.+ .
T Consensus 142 lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~--~ 203 (484)
T 3nyv_A 142 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK----------------KMKDKIGTAYYIAPEVLHG--T 203 (484)
T ss_dssp HHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC----------------SHHHHTTGGGTCCHHHHHT--C
T ss_pred HHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc----------------ccccCCCCccccCceeecC--C
Confidence 999999999999999999 467899999999998653221 1234579999999999987 5
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
|+.++|||||||++|+|++ ||......+............+ +.|...++++++||++||+.||.+|||+.++|+||
T Consensus 204 ~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~ 283 (484)
T 3nyv_A 204 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHE 283 (484)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSH
T ss_pred CCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhCh
Confidence 8999999999999999996 8887776666555554443333 45677889999999999999999999999999999
Q ss_pred CCCCc
Q 000993 688 LPPQM 692 (1196)
Q Consensus 688 ~~~~~ 692 (1196)
|+...
T Consensus 284 ~~~~~ 288 (484)
T 3nyv_A 284 WIQTY 288 (484)
T ss_dssp HHHHH
T ss_pred hhccc
Confidence 98654
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-40 Score=368.88 Aligned_cols=254 Identities=31% Similarity=0.483 Sum_probs=207.7
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCc
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~ 454 (1196)
.+++.++|++.+.||+|+||.||+|+++.+++.||||+++...........+.+|+..+..+ +||||++++++|.+
T Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~--- 82 (289)
T 1x8b_A 6 KSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE--- 82 (289)
T ss_dssp CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEE---
T ss_pred cccccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeec---
Confidence 35667899999999999999999999999999999999987655555677899999999999 99999999998743
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc----CCCCHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY----DHFDKELAWHLFRQIV 529 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~----~~l~e~~~~~i~~qIa 529 (1196)
...+|+|||||++ +|.+++... ..+++..++.++.||+
T Consensus 83 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~ 125 (289)
T 1x8b_A 83 -------------------------------------DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 125 (289)
T ss_dssp -------------------------------------TTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------CCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHH
Confidence 3568999999965 999999765 6799999999999999
Q ss_pred HHHHHHHhCCCcccCCCcCcEEecCC-------------------CCeEEeccCcchhccccccccCCCCCCCCCCcccc
Q 000993 530 EGLAHIHGQGIIHRDLTPNNIFFDAR-------------------NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 590 (1196)
Q Consensus 530 ~gL~yLHs~gIiHrDLKp~NILld~~-------------------~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~ 590 (1196)
.||+|||++||+||||||+|||++.+ ..+||+|||+++.....
T Consensus 126 ~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~------------------ 187 (289)
T 1x8b_A 126 RGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP------------------ 187 (289)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCS------------------
T ss_pred HHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCc------------------
Confidence 99999999999999999999999844 47999999999764311
Q ss_pred CcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc--CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHH
Q 000993 591 GTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH--PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRR 668 (1196)
Q Consensus 591 ~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt--Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~ 668 (1196)
....||+.|+|||++.+...++.++|||||||++|+|++ |+...... ... +. ....+......++++.+||++
T Consensus 188 -~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~--~~~-~~-~~~~~~~~~~~~~~~~~li~~ 262 (289)
T 1x8b_A 188 -QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ--WHE-IR-QGRLPRIPQVLSQEFTELLKV 262 (289)
T ss_dssp -CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH--HHH-HH-TTCCCCCSSCCCHHHHHHHHH
T ss_pred -cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH--HHH-HH-cCCCCCCCcccCHHHHHHHHH
Confidence 234699999999999875567789999999999999997 33222211 111 11 233344444567899999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCc
Q 000993 669 LMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||+.||.+|||+.++++|+|+...
T Consensus 263 ~l~~dp~~Rps~~~ll~h~~~~~~ 286 (289)
T 1x8b_A 263 MIHPDPERRPSAMALVKHSVLLSA 286 (289)
T ss_dssp HTCSSGGGSCCHHHHHTCTTC---
T ss_pred HhCCCcccCCCHHHHhhChHhhhh
Confidence 999999999999999999999864
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-40 Score=376.46 Aligned_cols=262 Identities=24% Similarity=0.366 Sum_probs=219.0
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc----hhHHHHHHHHHHHHhcCCCCeeeeeeeeeec
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----PVNDRILREVATLSRLQHQHVVRYYQAWFET 452 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~----~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~ 452 (1196)
....++|++.+.||+|+||.||+|+++.+|+.||||++....... .....+.+|+.+++.++||||+++++++.+
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~- 86 (321)
T 2a2a_A 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN- 86 (321)
T ss_dssp SCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-
T ss_pred hhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEec-
Confidence 344578999999999999999999999999999999997654321 135678999999999999999999988732
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~g 531 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.|
T Consensus 87 ---------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~a 127 (321)
T 2a2a_A 87 ---------------------------------------RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127 (321)
T ss_dssp ---------------------------------------SSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHH
T ss_pred ---------------------------------------CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 356899999996 5999999988889999999999999999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCCC----CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDARN----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~~----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
|+|||++||+||||||+|||++.++ .+||+|||+++...... ......||+.|+|||++.
T Consensus 128 L~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~gt~~y~aPE~~~ 191 (321)
T 2a2a_A 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV----------------EFKNIFGTPEFVAPEIVN 191 (321)
T ss_dssp HHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTC----------------CCCCCCSCGGGCCHHHHT
T ss_pred HHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCccc----------------cccccCCCCCccCccccc
Confidence 9999999999999999999999887 79999999997643211 123457999999999998
Q ss_pred CCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHH
Q 000993 608 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATEL 683 (1196)
Q Consensus 608 ~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~ei 683 (1196)
+ ..++.++|||||||++|+|++ ||......+............++ .+...++.+.+||++||+.||.+|||+.++
T Consensus 192 ~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~ 270 (321)
T 2a2a_A 192 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEA 270 (321)
T ss_dssp T-CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHH
T ss_pred C-CCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 7 568999999999999999996 88766655554444433333333 234567789999999999999999999999
Q ss_pred HhccCCCCchHH
Q 000993 684 LQDALPPQMEYE 695 (1196)
Q Consensus 684 L~~~~~~~~~~~ 695 (1196)
++|||+......
T Consensus 271 l~hp~~~~~~~~ 282 (321)
T 2a2a_A 271 LRHPWITPVDNQ 282 (321)
T ss_dssp HHSTTTSCSSHH
T ss_pred hcCccccCCCcc
Confidence 999999987654
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-40 Score=382.87 Aligned_cols=255 Identities=26% Similarity=0.395 Sum_probs=199.2
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
...++|++.+.||+|+||.||+|+++.+++.||||+++... ..+.+.+|+.+|+.++||||++++++|..
T Consensus 50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~------ 119 (349)
T 2w4o_A 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFET------ 119 (349)
T ss_dssp CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEEC------
T ss_pred cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEec------
Confidence 34577999999999999999999999999999999997432 23567889999999999999999998732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||
T Consensus 120 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH 165 (349)
T 2w4o_A 120 ----------------------------------PTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLH 165 (349)
T ss_dssp ----------------------------------SSEEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCeEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 356899999996 599999988888999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecC---CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 537 GQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
++||+||||||+|||++. ++.+||+|||+++...... .....+||+.|+|||++.+ ..++
T Consensus 166 ~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~~~~ 228 (349)
T 2w4o_A 166 ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV----------------LMKTVCGTPGYCAPEILRG-CAYG 228 (349)
T ss_dssp HTTCCCCCCCGGGEEESSSSTTCCEEECCCC--------------------------------CGGGSCHHHHTT-CCCC
T ss_pred HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc----------------ccccccCCCCccCHHHhcC-CCCC
Confidence 999999999999999976 7899999999998643211 1234579999999999988 5689
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhh-hcCCC-CCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLK-QKGEL-PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~-~~~~~-p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
.++|||||||++|||++ ||............+. ..... ++.+...++++.+||++||+.||.+|||+.++++|+|
T Consensus 229 ~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 308 (349)
T 2w4o_A 229 PEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPW 308 (349)
T ss_dssp THHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTT
T ss_pred cccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 99999999999999996 7866554443333332 22222 2344567889999999999999999999999999999
Q ss_pred CCCch
Q 000993 689 PPQME 693 (1196)
Q Consensus 689 ~~~~~ 693 (1196)
+.+..
T Consensus 309 ~~~~~ 313 (349)
T 2w4o_A 309 VTGKA 313 (349)
T ss_dssp TTSTT
T ss_pred cCCCc
Confidence 98653
|
| >2j3l_A Prolyl-tRNA synthetase; class II aminoacyl- T synthetase, editing, translation; HET: P5A; 2.3A {Enterococcus faecalis} PDB: 2j3m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-40 Score=409.27 Aligned_cols=415 Identities=12% Similarity=0.054 Sum_probs=284.1
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec--CCCcccccceEEEeecCCceEeecCCCcHH
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELRLP 812 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRPD~T~~ 812 (1196)
+.+.|++||+|.++.+++.|++.+++.|+++||++|.||+| ++. ++.+.+.++||+|.|++|+.++|||+.|++
T Consensus 34 ~~~~G~~~~lP~g~~~~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~sG~~~~~~~~m~~~~d~~~~~~~LrP~~~~~ 113 (572)
T 2j3l_A 34 QVAAGIYSYLPLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEET 113 (572)
T ss_dssp EEETTEEEECHHHHHHHHHHHHHHHHHHHTTTCEECBCCSEEETHHHHHHSHHHHSCTTSCEEECTTCCEEEECSCCHHH
T ss_pred ccCCCeeeeCCHHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHHHhcCCccccchheEEEecCCCCeEEEccccHHH
Confidence 35799999999999999999999999999999999999999 222 223567899999999999999999999999
Q ss_pred HHHHHHhC----CCCceeEEEecCeeecCCC-CC---CCcceeEeEEEEeCCCCccchHHH---HHHHHHHHHHcCCCCc
Q 000993 813 FIRWAISN----QKSSFKRYEISSVYRRAIG-HS---PPNRYLQGDFDIIGGASALTEAEV---LKVTMDIVTRFFHAES 881 (1196)
Q Consensus 813 iaR~~a~~----~~~P~r~~Y~G~VfR~e~~-~~---~~~ef~Q~GvEiiG~~~~~aDaEv---I~la~~~L~~lgi~~~ 881 (1196)
++|+++.+ +..|+|+||+|+|||+|++ +. |.|||+|+|+|+||.+...+|+|+ +.++.++|+.||+.
T Consensus 114 ~~~~~~~~~~s~~~lP~r~~~~g~~fR~E~~~~~Gl~R~ReF~q~d~~~f~~~~~~~~~e~~~~~~~~~~~~~~lgl~-- 191 (572)
T 2j3l_A 114 FTELIRDEINSYKRLPLNLYQIQTKYRDEKRSRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKAYSRIFERCGLE-- 191 (572)
T ss_dssp HHHHHHHHCCBGGGCCEEEEEEEEEECCCSSCCTGGGSCSEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCC--
T ss_pred HHHHHHhhccChhhcCHhhheecCeeccCcCcccCccccceeEEeeeEEEcCCHHHHHHHHHHHHHHHHHHHHHcCCc--
Confidence 99988874 2469999999999999987 34 556799999999999888899986 45899999999995
Q ss_pred eEEEeCcHHHHHHHHH------------------HcCCCHH-----------------------------HHHHHHHHHH
Q 000993 882 CDIHLNHGDLLEAIWS------------------WAGIKAE-----------------------------HREKVAELLA 914 (1196)
Q Consensus 882 ~~i~Lg~~~i~~~~l~------------------~lgl~~~-----------------------------~~~~l~~~l~ 914 (1196)
+.+.+|+++.+.+.+. .++.... ....+...+.
T Consensus 192 ~~~~~~~~g~~g~~~s~E~~~~~~~ge~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ti~~l~~~lg 271 (572)
T 2j3l_A 192 FRAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTESDYAANLEMATSLYTPKKSHETQLDLEKIATPEVGTIAEVANFFE 271 (572)
T ss_dssp EEEEECCGGGGTCSSEEEEEEECTTCSEEEEEESSSSCEEETTTCCCCCCCCCCCCCCCCCEEEECTTCCSHHHHHHHHT
T ss_pred EEEEecccccCCCcccEEEEEEcCCCcceEEEeCCCCcccchhhhhcccccccccccccccceecCCCCCcHHHHHHHhC
Confidence 9999999776654320 1111000 0111111111
Q ss_pred H-hcCCCCCcccccccHHHHHHHHH-HhcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChHHHHHHHHH------
Q 000993 915 M-MGSLRPQSSEWKSKWVVIRRQLL-QELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDEL------ 986 (1196)
Q Consensus 915 ~-~d~~~~~~~~~k~~~~~~~~~~~-~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L------ 986 (1196)
. .+.+.+... .+ ..+....-++ ....+.. .++..++. .. .+.... .+.+.++
T Consensus 272 ~~~~~i~K~l~-~~-~~~~~~~vli~gd~el~~---~kl~~~l~---~~---------~l~~a~---~~el~~~~g~~~g 331 (572)
T 2j3l_A 272 VEPQRIIKSVL-FI-ADEEPVMVLVRGDHDVND---VKLKNFLG---AD---------FLDEAT---EEDARRVLGAGFG 331 (572)
T ss_dssp CCGGGBEEEEE-EE-ETTEEEEEEEETTCCBCH---HHHHHHHT---CS---------CEEECC---HHHHHHHHSSCTT
T ss_pred cCHHHeEEEEE-EE-eCCcEEEEEeeCccccCH---HHHHHhhC---CC---------ccccCC---HHHHHHhhCCCcc
Confidence 0 000000000 00 0000000000 0000110 11111110 00 000000 0111111
Q ss_pred HHHHcCC--CceEEEcCCCCC--------------------CCCCccceEEEEEecCCCCccccccccccccccccc---
Q 000993 987 YLRIWRI--EKNIYIDALMPP--------------------IESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD--- 1041 (1196)
Q Consensus 987 ~l~~~g~--~~~i~~Dl~lvr--------------------gl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD--- 1041 (1196)
++..+|+ .-.+.+|.+++| |++||++++|++.....+ ...++|+ ||||
T Consensus 332 ~~~p~gl~~~i~~~iD~sl~r~~~~~~ga~~~~~~~~~~~~grd~~~~~~~el~~~~~G------~~~~~~g-g~~~~~~ 404 (572)
T 2j3l_A 332 SIGPVNVSEDVKIYADLAVQDLANAIVGANEDGYHLTNVNPDRDFQPISYEDLRFVQEG------DPSPDGN-GVLAFTK 404 (572)
T ss_dssp SCCSTTCCTTCEEEEETTTTTCCSEEEECSSTTEEEEEECBTTTBCCSEEECCBCCCTT------CBCTTSS-SBEEEEE
T ss_pred ccCCccCCCCCcEEEehhhhcCCceEEccCCCCceeeccccccCcCcCcHHHHHHHhcC------CcccccC-Ccceecc
Confidence 1111222 236899999999 789999999998754332 2345664 8887
Q ss_pred --------hhh----hhccccccccccCCCCCCCcc-eecccHHHHHhhccCC------CCCCCCCCCceEEEEEcCC--
Q 000993 1042 --------YLL----HRMWDREYVGYASRTNPPSGV-GASLALETIIQHYPVD------FKPVRNEAGTSVLVCSRGG-- 1100 (1196)
Q Consensus 1042 --------~L~----~~fg~~~~~~~~g~~~~~pAv-Gfaiglerl~~~L~~~------~~~~~~~~~~~vlv~~~~~-- 1100 (1196)
+|- ++|+.. ....+++..+|++ ||+||+|||+.+|.+. ...+...++.+|+|++.+.
T Consensus 405 ~ievg~~f~Lg~~ys~~~~~~--~~~~~g~~~~p~~g~~giGveRli~~l~e~~~d~~g~~~p~~~ap~~v~vi~~~~~~ 482 (572)
T 2j3l_A 405 GIEIGHIFKLGTRYSDAMGAT--VLDENGREKSVIMGCYGIGVSRLLSAIVEQNADERGINWPTGIAPFDLHVVQMNVKD 482 (572)
T ss_dssp EEEEEEEEEEETHHHHHHTCE--EECTTSCEEECEEEEEEEEHHHHHHHHHHHHEETTEECCCTTTSSCSEEEEESCTTC
T ss_pred ceEEEEEeccCcccccccCCE--EECCCCcEEeeeeeccccCHHHHHHHHHHhcCcccCcccCCCcCCeEEEEEecCCCC
Confidence 442 444321 1111333347888 8999999999886522 2222234678999999841
Q ss_pred CchHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHH
Q 000993 1101 GGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRF 1180 (1196)
Q Consensus 1101 ~~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~ 1180 (1196)
+....+|.+++++||+.|++|++++. ++++++++++|++.|+|++|++|++| ++|+|+||+|.+++|..++++++++.
T Consensus 483 ~~~~~~a~~l~~~Lr~~gi~v~~d~~-~~~~g~k~~~a~~~g~p~~iivG~~e-~~~~v~vk~~~~~~q~~v~~~~l~~~ 560 (572)
T 2j3l_A 483 EYQTKLSQEVEAMMTEAGYEVLVDDR-NERAGVKFADADLIGCPIRITVGKKA-VDGVVEVKIKRTGEMLEVRKEELEST 560 (572)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECS-SCCHHHHHHHHHHHCCSEEEEECGGG-GGTEEEEEETTTCCEEEEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEeCC-CCCHhHHHHHHHhcCCCEEEEEcccc-cCCeEEEEEcCCCcEEEEeHHHHHHH
Confidence 34678899999999999999998876 57999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHh
Q 000993 1181 LLDAIAS 1187 (1196)
Q Consensus 1181 l~~~l~~ 1187 (1196)
|+ .++.
T Consensus 561 l~-~~~~ 566 (572)
T 2j3l_A 561 LS-ILMN 566 (572)
T ss_dssp HH-HHCC
T ss_pred HH-HHhc
Confidence 98 7653
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-40 Score=387.11 Aligned_cols=258 Identities=22% Similarity=0.373 Sum_probs=215.3
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.+...++|++.+.||+|+||.||+|.++.+|+.||+|++.... ......+.+|+.+|+.++||||++++++|.+
T Consensus 46 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~---- 119 (387)
T 1kob_A 46 QGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFED---- 119 (387)
T ss_dssp CSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC----
T ss_pred CCccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc--hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEe----
Confidence 3455689999999999999999999999999999999987432 2344578899999999999999999998732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~ 533 (1196)
...+|+|||||+ ++|.+++.... .+++..++.++.||+.||+
T Consensus 120 ------------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~ 163 (387)
T 1kob_A 120 ------------------------------------KYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLK 163 (387)
T ss_dssp ------------------------------------SSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Confidence 456899999996 59999987654 6999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecC--CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDA--RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~--~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
|||++||+||||||+|||++. ++.+||+|||+++...... .....+||+.|+|||++.+ ..
T Consensus 164 ~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~~ 226 (387)
T 1kob_A 164 HMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE----------------IVKVTTATAEFAAPEIVDR-EP 226 (387)
T ss_dssp HHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS----------------CEEEECSSGGGCCHHHHTT-CC
T ss_pred HHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCc----------------ceeeeccCCCccCchhccC-CC
Confidence 999999999999999999974 4679999999998653211 1123479999999999987 56
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
++.++|||||||++|||++ ||......+............+ ..+...++++.+||++||+.||.+|||+.++++|+
T Consensus 227 ~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp 306 (387)
T 1kob_A 227 VGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHP 306 (387)
T ss_dssp BCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTST
T ss_pred CCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCc
Confidence 8999999999999999996 8877665555444444333333 34456788999999999999999999999999999
Q ss_pred CCCCc
Q 000993 688 LPPQM 692 (1196)
Q Consensus 688 ~~~~~ 692 (1196)
|+.+.
T Consensus 307 ~~~~~ 311 (387)
T 1kob_A 307 WLKGD 311 (387)
T ss_dssp TTSSC
T ss_pred cccCC
Confidence 99864
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-40 Score=382.96 Aligned_cols=251 Identities=25% Similarity=0.356 Sum_probs=205.9
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-----CCCeeeeeeeeeec
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-----HQHVVRYYQAWFET 452 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-----HpnIV~l~~~~~e~ 452 (1196)
...++|+++++||+|+||+||+|++..+++.||||+++. .......+.+|+.+++.++ ||||++++++|..
T Consensus 32 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~- 107 (360)
T 3llt_A 32 LLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN---IKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMY- 107 (360)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEE-
T ss_pred EecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc---chhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeE-
Confidence 345799999999999999999999999999999999863 3344567788999999996 9999999998843
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC--CCCHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIVE 530 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qIa~ 530 (1196)
...+|+|||||+++|.+++.... .+++..++.++.||+.
T Consensus 108 ---------------------------------------~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~ 148 (360)
T 3llt_A 108 ---------------------------------------YDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILK 148 (360)
T ss_dssp ---------------------------------------TTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred ---------------------------------------CCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 35689999999889999997654 5999999999999999
Q ss_pred HHHHHHhCCCcccCCCcCcEEecC-------------------------CCCeEEeccCcchhccccccccCCCCCCCCC
Q 000993 531 GLAHIHGQGIIHRDLTPNNIFFDA-------------------------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTG 585 (1196)
Q Consensus 531 gL~yLHs~gIiHrDLKp~NILld~-------------------------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~ 585 (1196)
||+|||++||+||||||+|||++. ++.+||+|||+|+....
T Consensus 149 aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~-------------- 214 (360)
T 3llt_A 149 ALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD-------------- 214 (360)
T ss_dssp HHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS--------------
T ss_pred HHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCC--------------
Confidence 999999999999999999999975 78899999999975321
Q ss_pred CccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCcc-------
Q 000993 586 GVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW------- 655 (1196)
Q Consensus 586 ~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~------- 655 (1196)
......||+.|+|||++.+ ..++.++|||||||++|||++ ||......+............|..+
T Consensus 215 ----~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 289 (360)
T 3llt_A 215 ----YHGSIINTRQYRAPEVILN-LGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKT 289 (360)
T ss_dssp ----CCCSCCSCGGGCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTS
T ss_pred ----CCcCccCcccccCcHHHcC-CCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhc
Confidence 1234579999999999998 569999999999999999996 8876554443333222222222110
Q ss_pred ------------------------------------ccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 656 ------------------------------------VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 656 ------------------------------------~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
....+.+.+||++||+.||.+|||+.++|+|+||+
T Consensus 290 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 290 NGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp GGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred cCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence 11125677999999999999999999999999985
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=368.07 Aligned_cols=288 Identities=43% Similarity=0.681 Sum_probs=214.3
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
.++.++|++.+.||+|+||.||+|++..+|+.||||+++. .......+.+|+.+++.++||||++++++|.+....
T Consensus 2 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~- 77 (303)
T 1zy4_A 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNF- 77 (303)
T ss_dssp BHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE---EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCC-
T ss_pred CcccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec---cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcch-
Confidence 3456789999999999999999999999999999999864 234456789999999999999999999998653210
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~y 534 (1196)
+...........+|+|||||+ ++|.+++.... .+++..++.++.||+.||+|
T Consensus 78 --------------------------~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~ 131 (303)
T 1zy4_A 78 --------------------------VKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSY 131 (303)
T ss_dssp --------------------------CC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHH
T ss_pred --------------------------hhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHH
Confidence 000011123567899999996 59999998544 58889999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++.+||+|||+++............. ..............||+.|+|||++.+...++.
T Consensus 132 LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ 210 (303)
T 1zy4_A 132 IHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS-QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNE 210 (303)
T ss_dssp HHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC--------------------------CTTSCHHHHTSCSCCCT
T ss_pred HHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhcccc-ccccccccccccCCCcccccCcccccCCCCCcc
Confidence 9999999999999999999999999999999986542210000000 000000112345679999999999987557899
Q ss_pred cchhHHHHHHHHHhhcCCchhHHHHHHHHHhhh-cCCCCCcc-ccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 615 KADMYSLGIVFFELWHPFSTAMERQIVLSDLKQ-KGELPPSW-VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 615 ksDVwSlGviLyELltPf~~~~~~~~~~~~l~~-~~~~p~~~-~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
++|||||||++|||++||............+.. ....|+.+ ...++.+.+||++||+.||.+|||+.++++|+|+...
T Consensus 211 ~~Di~slG~il~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (303)
T 1zy4_A 211 KIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK 290 (303)
T ss_dssp HHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred hhhHHHHHHHHHHHHhccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence 999999999999999999866554444333332 23344433 3345678999999999999999999999999999876
Q ss_pred hHH
Q 000993 693 EYE 695 (1196)
Q Consensus 693 ~~~ 695 (1196)
..+
T Consensus 291 ~~~ 293 (303)
T 1zy4_A 291 HQD 293 (303)
T ss_dssp CHH
T ss_pred ChH
Confidence 543
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-40 Score=382.10 Aligned_cols=260 Identities=25% Similarity=0.346 Sum_probs=203.5
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc---hhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL---PVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~---~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
...++|++.+.||+|+||.||+|+++.+|+.||||+++...... .....+.+|+.+++.++||||++++++|.+
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 83 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH--- 83 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC---
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEee---
Confidence 34578999999999999999999999999999999987543221 122468899999999999999999998732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~ 533 (1196)
...+|+|||||+++|.+++... ..+++..++.++.||+.||+
T Consensus 84 -------------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~ 126 (346)
T 1ua2_A 84 -------------------------------------KSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLE 126 (346)
T ss_dssp -------------------------------------TTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCceEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHH
Confidence 3457999999999999988765 46899999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+...++
T Consensus 127 ~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~ 191 (346)
T 1ua2_A 127 YLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN---------------RAYTHQVVTRWYRAPELLFGARMYG 191 (346)
T ss_dssp HHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC---------------CCCCCSCCCCTTCCHHHHTTCSCCC
T ss_pred HHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCc---------------ccCCcccccccccCchHhhCCCCCC
Confidence 9999999999999999999999999999999998653211 1123457999999999998755689
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-C------------------------ccccCCHHHHHH
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-P------------------------SWVAKFSEQESL 665 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~------------------------~~~~~~~~l~~L 665 (1196)
.++|||||||++|||++ ||................+..+ . .+...++++.+|
T Consensus 192 ~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 271 (346)
T 1ua2_A 192 VGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDL 271 (346)
T ss_dssp HHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHH
T ss_pred chhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHH
Confidence 99999999999999996 6655554444433332211111 0 013345789999
Q ss_pred HHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 666 LRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 666 I~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|++||+.||.+|||+.++++|+||.+.
T Consensus 272 i~~~L~~dP~~Rpt~~ell~h~~f~~~ 298 (346)
T 1ua2_A 272 IQGLFLFNPCARITATQALKMKYFSNR 298 (346)
T ss_dssp HHHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred HHHHhccChhhCCCHHHHhcChhhhcC
Confidence 999999999999999999999999764
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-40 Score=384.55 Aligned_cols=261 Identities=28% Similarity=0.388 Sum_probs=204.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++++.||+|+||.||+|.+..+|+.||||++............+.+|+.+++.++||||+++++++....
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----- 97 (371)
T 2xrw_A 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK----- 97 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCC-----
T ss_pred hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccc-----
Confidence 358999999999999999999999999999999999865555556678999999999999999999999884321
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
.......+|+|||||+++|.+.+. ..+++..++.++.||+.||+|||++
T Consensus 98 -----------------------------~~~~~~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~ 146 (371)
T 2xrw_A 98 -----------------------------SLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA 146 (371)
T ss_dssp -----------------------------STTTCCEEEEEEECCSEEHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -----------------------------ccccccceEEEEEcCCCCHHHHHh--hccCHHHHHHHHHHHHHHHHHHHHC
Confidence 011245789999999999998885 4589999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++..... ......+||+.|+|||++.+ ..++.++||
T Consensus 147 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~----------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di 209 (371)
T 2xrw_A 147 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS----------------FMMTPYVVTRYYRAPEVILG-MGYKENVDI 209 (371)
T ss_dssp TCCCSCCCGGGEEECTTSCEEECCCCC--------------------------------CTTCCHHHHTT-CCCCTTHHH
T ss_pred CeecccCCHHHEEEcCCCCEEEEEeecccccccc----------------cccCCceecCCccCHHHhcC-CCCCchHhH
Confidence 9999999999999999999999999999864321 11234589999999999988 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCcc---------------------------------------c
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW---------------------------------------V 656 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~---------------------------------------~ 656 (1196)
|||||++|||++ ||................+..++.+ .
T Consensus 210 wslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (371)
T 2xrw_A 210 WSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNK 289 (371)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccc
Confidence 999999999996 8876655444433332211111000 0
Q ss_pred cCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 657 AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 657 ~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
..++++.+||++||+.||.+|||++++|+||||...
T Consensus 290 ~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 325 (371)
T 2xrw_A 290 LKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 325 (371)
T ss_dssp HHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred cccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhh
Confidence 013568899999999999999999999999998654
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-40 Score=380.53 Aligned_cols=260 Identities=25% Similarity=0.411 Sum_probs=210.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.+++|++++.||+|+||.||+|++..+|+.||||++............+.+|+.+++.++||||+++++++.+
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------- 95 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKK------- 95 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeec-------
Confidence 3689999999999999999999999999999999997665555566778899999999999999999998732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+|||||++ +|.+++.....+++..++.++.||+.||+|||+
T Consensus 96 ---------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~ 142 (331)
T 4aaa_A 96 ---------------------------------KKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHS 142 (331)
T ss_dssp ---------------------------------TTEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4567999999986 566666667789999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+...++.++|
T Consensus 143 ~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~D 207 (331)
T 4aaa_A 143 HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG---------------EVYDDEVATRWYRAPELLVGDVKYGKAVD 207 (331)
T ss_dssp TTCCCCCCCGGGEEECTTSCEEECCCTTC---------------------------CCCCCTTCCHHHHTTCTTCCTHHH
T ss_pred CCEEccCcChheEEEcCCCcEEEEeCCCceeecCCc---------------cccCCCcCCccccCcccccCCCCcchHHH
Confidence 999999999999999999999999999997653221 01234578999999999987557899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC----------------------------ccccCCHHHHHHH
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP----------------------------SWVAKFSEQESLL 666 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~----------------------------~~~~~~~~l~~LI 666 (1196)
||||||++|+|++ ||................+..++ .+...++.+.+||
T Consensus 208 i~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 287 (331)
T 4aaa_A 208 VWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLA 287 (331)
T ss_dssp HHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHH
Confidence 9999999999996 78765554443333221111110 1124567899999
Q ss_pred HHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 667 RRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 667 ~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
++||+.||.+|||+.++|+|+||+...
T Consensus 288 ~~~L~~dP~~Rpt~~ell~hp~f~~~~ 314 (331)
T 4aaa_A 288 KKCLHIDPDKRPFCAELLHHDFFQMDG 314 (331)
T ss_dssp HHHTCSSGGGSCCGGGGGGSHHHHGGG
T ss_pred HHHhccCcccCCCHHHHhcCchhccCC
Confidence 999999999999999999999998754
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-40 Score=371.15 Aligned_cols=257 Identities=23% Similarity=0.361 Sum_probs=195.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|++..+|+.||||+++...........+.++...++.++||||+++++++.+
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~-------- 77 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-------- 77 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC--------
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeec--------
Confidence 478999999999999999999999999999999997554433334445556666888899999999998743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES----YDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~----~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|+|||||+++|.+++.. ...+++..++.++.||+.||+||
T Consensus 78 --------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~l 125 (290)
T 3fme_A 78 --------------------------------EGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL 125 (290)
T ss_dssp --------------------------------SSSEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------cCCEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 345799999999998777653 46799999999999999999999
Q ss_pred HhC-CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc---CCCC
Q 000993 536 HGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ---GWPK 611 (1196)
Q Consensus 536 Hs~-gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~ 611 (1196)
|++ ||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++. ....
T Consensus 126 H~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~~t~~y~aPE~~~~~~~~~~ 189 (290)
T 3fme_A 126 HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV----------------AKDIDAGCKPYMAPERINPELNQKG 189 (290)
T ss_dssp HHHSCCCCCCCSGGGCEECTTCCEEBCCC-------------------------------CCCCCCSCHHHHSCCTTC--
T ss_pred hhcCCeecCCCCHHHEEECCCCCEEEeecCCcccccccc----------------cccccCCCccccChhhcChhhcCcC
Confidence 998 99999999999999999999999999998653221 122347999999999973 2356
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
++.++|||||||++|+|++ ||..........................++++.+||.+||+.||.+|||+.++++|||
T Consensus 190 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~ 269 (290)
T 3fme_A 190 YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 269 (290)
T ss_dssp CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHH
T ss_pred CCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcc
Confidence 8999999999999999996 7765332222222222233322233456789999999999999999999999999999
Q ss_pred CCCc
Q 000993 689 PPQM 692 (1196)
Q Consensus 689 ~~~~ 692 (1196)
|...
T Consensus 270 f~~~ 273 (290)
T 3fme_A 270 FTLH 273 (290)
T ss_dssp HHHH
T ss_pred cccC
Confidence 8653
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-40 Score=380.65 Aligned_cols=257 Identities=25% Similarity=0.381 Sum_probs=204.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCC--CCeeeeeeeeeecCccccC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH--QHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~H--pnIV~l~~~~~e~~~~~~~ 458 (1196)
++|++++.||+|+||.||+|.+. +++.||||++............+.+|+.+|+.++| |||+++++++..
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~------- 80 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT------- 80 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-------
T ss_pred CEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEee-------
Confidence 57999999999999999999985 79999999998766666666789999999999977 999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+|||+++++|.+++.....+++.+++.++.||+.||+|||++
T Consensus 81 ---------------------------------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~ 127 (343)
T 3dbq_A 81 ---------------------------------DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 127 (343)
T ss_dssp ---------------------------------SSEEEEEECCCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ---------------------------------CCEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 45789999988889999999988999999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC----------
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG---------- 608 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---------- 608 (1196)
||+||||||+|||++ ++.+||+|||+++....... .......+||+.|+|||++.+
T Consensus 128 ~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~ 193 (343)
T 3dbq_A 128 GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT-------------SVVKDSQVGTVNYMPPEAIKDMSSSRENGKS 193 (343)
T ss_dssp TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-------------------------CCCCSSCCHHHHHHCC--------
T ss_pred CeecCCCCcceEEEE-CCcEEEeecccccccCcccc-------------cccCCCCcCCcCcCCHHHHhhcccccccccc
Confidence 999999999999997 68899999999986532210 111235689999999999864
Q ss_pred CCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 609 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 609 ~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
...++.++|||||||++|||++ ||..........................++++.+||.+||+.||.+|||+.++++
T Consensus 194 ~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 194 KSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 2458899999999999999996 7765433322222222122222222234568999999999999999999999999
Q ss_pred ccCCCCc
Q 000993 686 DALPPQM 692 (1196)
Q Consensus 686 ~~~~~~~ 692 (1196)
|+|+...
T Consensus 274 hp~~~~~ 280 (343)
T 3dbq_A 274 HPYVQIQ 280 (343)
T ss_dssp SHHHHSC
T ss_pred Ccccccc
Confidence 9998654
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-40 Score=386.54 Aligned_cols=261 Identities=26% Similarity=0.421 Sum_probs=197.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++++.||+|+||.||+|.+..+|+.||||++............+.+|+.+|+.++||||++++++|.....
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~----- 102 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----- 102 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSS-----
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCc-----
Confidence 478999999999999999999999999999999987655555566789999999999999999999998743210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
......+|++|||++++|.+++.. ..+++..++.++.||+.||+|||++|
T Consensus 103 -----------------------------~~~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g 152 (367)
T 2fst_X 103 -----------------------------LEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSAD 152 (367)
T ss_dssp -----------------------------GGGCCCCEEEEECCCEECC------CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -----------------------------cccCCeEEEEecccCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 012345799999999899988865 67999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+|||++.++.+||+|||+++.... ..+..+||+.|+|||++.+...++.++|||
T Consensus 153 ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw 214 (367)
T 2fst_X 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTAD------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIW 214 (367)
T ss_dssp CCCCCCCGGGEEECTTCCEEECC---------------------------------CCCTTCCHHHHTTCCSCCTTHHHH
T ss_pred eeeCCCCHhhEEECCCCCEEEeeccccccccc------------------cCCCcCcCcCccChHHHcCCcCCCchhhHH
Confidence 99999999999999999999999999986421 123468999999999998756799999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-----------------------CC-----CccccCCHHHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-----------------------LP-----PSWVAKFSEQESLLRR 668 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-----------------------~p-----~~~~~~~~~l~~LI~~ 668 (1196)
||||++|||++ ||...........+....+. .+ ..+...++.+.+||++
T Consensus 215 slG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~ 294 (367)
T 2fst_X 215 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEK 294 (367)
T ss_dssp HHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHH
Confidence 99999999996 78765544333322221111 11 1123456789999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCch
Q 000993 669 LMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||+.||.+|||+.++|+||||.+..
T Consensus 295 mL~~dP~~R~t~~e~L~hp~~~~~~ 319 (367)
T 2fst_X 295 MLVLDSDKRITAAQALAHAYFAQYH 319 (367)
T ss_dssp HSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred hCCCCcccCcCHHHHhcChhhhhcc
Confidence 9999999999999999999998753
|
| >1evl_A Threonyl-tRNA synthetase; amino acid recognition, zinc ION, adenylate analog, deletion mutant, ligase; HET: TSB; 1.55A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1evk_A* 1fyf_A* 1kog_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-40 Score=387.21 Aligned_cols=357 Identities=11% Similarity=0.055 Sum_probs=272.4
Q ss_pred ccccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec--CCCcccccceEEEeecCCceEeecCC
Q 000993 735 LRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHE 808 (1196)
Q Consensus 735 l~~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRPD 808 (1196)
+.+.+.++|++||+|.++.+++.|++.+++.|.++||++|.||+| ++. ++.+.+.++||+ .|++|+.++|||+
T Consensus 13 ~~~~~~~~G~~d~lP~g~~~~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~sG~~~~~~~em~~-~d~~~~~~~LrP~ 91 (401)
T 1evl_A 13 YHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPM 91 (401)
T ss_dssp EECCTTSTTCCEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHHHHTHHHHSGGGCCE-EEETTEEEEECSC
T ss_pred eEecCCCCcceEECchHHHHHHHHHHHHHHHHHHcCCEEEECCeeccHHHHHhcCcHhhhchhhEe-EecCCceEEEcCC
Confidence 334566899999999999999999999999999999999999999 222 234456789999 9999999999999
Q ss_pred CcHHHHHHHHhCC----CCceeEEEecCeeecCCC--CC---CCcceeEeEEEEeCCCCccchH---HHHHHHHHHHHHc
Q 000993 809 LRLPFIRWAISNQ----KSSFKRYEISSVYRRAIG--HS---PPNRYLQGDFDIIGGASALTEA---EVLKVTMDIVTRF 876 (1196)
Q Consensus 809 ~T~~iaR~~a~~~----~~P~r~~Y~G~VfR~e~~--~~---~~~ef~Q~GvEiiG~~~~~aDa---EvI~la~~~L~~l 876 (1196)
.|++++|+++++. ..|+|+||+|+|||+|.+ +. |.+||+|+|+|+||. ...+|+ |+|.++.++|+.|
T Consensus 92 ~~~~~~~~~~~~~~s~~~lP~r~~~~g~~fR~E~~~p~~Gl~R~reF~q~d~~~f~~-~~~~~~e~~e~i~~~~~~~~~l 170 (401)
T 1evl_A 92 NCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCT-EEQIRDEVNGCIRLVYDMYSTF 170 (401)
T ss_dssp SHHHHHHHHTSSCCBGGGCSEEEEEEEEEECCCCGGGCBTTTBCSEEEEEEEEEEEC-GGGHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHhhhhhhhhCChhhccccceecCCCCcccccccccCcEEecceEEeCC-HHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999998642 469999999999999884 64 456799999999996 567787 5999999999999
Q ss_pred CCCCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 000993 877 FHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGL 956 (1196)
Q Consensus 877 gi~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~ 956 (1196)
|+.+ +.+.+++.. ...+|..+.+.. +.. ..++++...+++.
T Consensus 171 gl~~-~~~~~~~~~-----~~~~~~~~~~~~----a~~------------------~~~~~l~~~g~~~----------- 211 (401)
T 1evl_A 171 GFEK-IVVKLSTRP-----EKRIGSDEMWDR----AEA------------------DLAVALEENNIPF----------- 211 (401)
T ss_dssp TCSC-CEEEEECCC-----SSCCSCHHHHHH----HHH------------------HHHHHHHHTTCCC-----------
T ss_pred CCCc-eEEEEecCC-----cccCCCHHHHHH----HHH------------------HHHHHHHhcCCCc-----------
Confidence 9974 999999853 011121111100 000 0011111111100
Q ss_pred HhcCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCC--CCCCccceEEEEEecCCCCcccccccccc
Q 000993 957 RFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPP--IESYHRNLFFQVFSVKEKYPATLVEGTLL 1034 (1196)
Q Consensus 957 ~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvr--gl~YYTG~vFe~~~~~~~~~~~~~~~~~I 1034 (1196)
+ +. ... ...+| . .+|+.+++ |++||+|++|.-|.. +.
T Consensus 212 -------~----~~---~~~-----------~~~y~--~--~~d~~~~~~~G~~~~~gt~~~d~~l------------~~ 250 (401)
T 1evl_A 212 -------E----YQ---LGE-----------GAFYG--P--KIEFTLYDCLDRAWQCGTVQLDFSL------------PS 250 (401)
T ss_dssp -------E----EE---TTC-----------SBTTB--C--EEEEEEECTTCCEEEEEEEEEESSH------------HH
T ss_pred -------e----ec---CCC-----------ccccC--C--CcCeEEEecCCCeEEeeeeeecccc------------cc
Confidence 0 00 000 00011 2 25777777 999999999843321 35
Q ss_pred ccccccchhhhhccccccccccCCCCCCCccee-cc--cHHHHHhhccC---CCCCCCCCCCceEEEEEcCCCchHHHHH
Q 000993 1035 AVGGRYDYLLHRMWDREYVGYASRTNPPSGVGA-SL--ALETIIQHYPV---DFKPVRNEAGTSVLVCSRGGGGLLVERM 1108 (1196)
Q Consensus 1035 ~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGf-ai--glerl~~~L~~---~~~~~~~~~~~~vlv~~~~~~~~~~~a~ 1108 (1196)
+.|+||++. .|. ..+|++|+ ++ |+|||+.+|.+ +..+. ..++.+|+|++.+ ++...+|.
T Consensus 251 ~~~~~y~~~---~g~----------~~~p~~~~~~~~GgieRli~~l~e~~~~~~p~-~~ap~~v~vi~~~-~~~~~~a~ 315 (401)
T 1evl_A 251 RLSASYVGE---DNE----------RKVPVMIHRAILGSMERFIGILTEEFAGFFPT-WLAPVQVVIMNIT-DSQSEYVN 315 (401)
T ss_dssp HTTCCEECT---TSC----------EECCEEEEEEEEEEHHHHHHHHHHHHTTCCCT-TTCSSCEEEEESS-GGGHHHHH
T ss_pred ccCCEEECC---CCC----------CcCcEEEEecCCCcHHHHHHHHHHHhCCcCCC-CCCCeEEEEEecC-HHHHHHHH
Confidence 679999864 222 24699999 88 99999988764 22222 2467899999996 77889999
Q ss_pred HHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHhh
Q 000993 1109 ELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1188 (1196)
Q Consensus 1109 ~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~~ 1188 (1196)
+++++||+.|++|++++. ++++++++++|++.|+|++|++|++|+++|+|+||+|.+|+|..++++++++.|++.++..
T Consensus 316 ~l~~~Lr~~Gi~v~~d~~-~~~~~~k~~~A~~~g~p~~iiiG~~e~~~~~v~vk~~~~~~q~~v~~~el~~~l~~~~~~~ 394 (401)
T 1evl_A 316 ELTQKLSNAGIRVKADLR-NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSR 394 (401)
T ss_dssp HHHHHHHHTTCCEEEECC-SSCHHHHHHHHHHTTCSEEEEECHHHHHHTEEEEEETTSCEEEEEEHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCEEEEECC-CCCHHHHHHHHHhcCCCEEEEECcchhhCCeEEEEECCCCceEEeeHHHHHHHHHHHHhhh
Confidence 999999999999998876 6799999999999999999999999999999999999999999999999999999888754
Q ss_pred c
Q 000993 1189 F 1189 (1196)
Q Consensus 1189 ~ 1189 (1196)
.
T Consensus 395 ~ 395 (401)
T 1evl_A 395 S 395 (401)
T ss_dssp C
T ss_pred h
Confidence 3
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=372.80 Aligned_cols=252 Identities=24% Similarity=0.421 Sum_probs=209.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 461 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~ 461 (1196)
.|+..+.||+|+||.||+|+++.+|+.||||++..... ...+.+.+|+.+++.++||||++++++|..
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~---------- 113 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHFNVVEMYKSYLV---------- 113 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CSHHHHHHHHHHHTTCCCTTBCCEEEEEEE----------
T ss_pred hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch--hHHHHHHHHHHHHHhCCCCCcceEEEEEEE----------
Confidence 47778899999999999999999999999999975443 235678899999999999999999998743
Q ss_pred cCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 462 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 462 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
...+|+||||++ ++|.+++.. ..+++..++.++.||+.||+|||++||
T Consensus 114 ------------------------------~~~~~lv~e~~~~~~L~~~l~~-~~l~~~~~~~i~~qi~~~L~~LH~~~i 162 (321)
T 2c30_A 114 ------------------------------GEELWVLMEFLQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQGV 162 (321)
T ss_dssp ------------------------------TTEEEEEECCCCSCBHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred ------------------------------CCEEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346799999996 589888764 569999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+ ..++.++||||
T Consensus 163 vH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s 226 (321)
T 2c30_A 163 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV---------------PKRKSLVGTPYWMAPEVISR-SLYATEVDIWS 226 (321)
T ss_dssp ECCCCSGGGEEECTTCCEEECCCTTCEECCSSS---------------CCBCCCCSCGGGCCHHHHTT-CCBCTHHHHHH
T ss_pred ecCCCCHHHEEECCCCcEEEeeeeeeeecccCc---------------cccccccCCccccCHhhhcC-CCCCchhhHHH
Confidence 999999999999999999999999997643211 11234579999999999987 56899999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|||++|||++ ||......+...................++.+.+||.+||+.||.+|||+.++++|+|+.+.
T Consensus 227 lG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 301 (321)
T 2c30_A 227 LGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQT 301 (321)
T ss_dssp HHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGC
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccC
Confidence 9999999996 77765554444333332222223344567899999999999999999999999999999764
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-40 Score=366.88 Aligned_cols=261 Identities=28% Similarity=0.479 Sum_probs=215.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+.++|++.+.||+|+||.||+|+++.+++.||||++..... ....+.+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 76 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRRE------- 76 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC-TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-------
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc-hhhhHHHHHHHHHHHhcCCCCceeeeeEEEc-------
Confidence 45789999999999999999999999999999999975443 2345778999999999999999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....|+||||+++ +|.+++.....+++..++.++.||+.||+|||+
T Consensus 77 ---------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~ 123 (276)
T 2yex_A 77 ---------------------------------GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123 (276)
T ss_dssp ---------------------------------TTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3567999999975 999999887889999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+||+++.++.+||+|||++......... .......||+.|+|||++.+...++.++|
T Consensus 124 ~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 190 (276)
T 2yex_A 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE-------------RLLNKMCGTLPYVAPELLKRREFHAEPVD 190 (276)
T ss_dssp TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE-------------CCBCCCCSCGGGCCGGGGTCSSBCHHHHH
T ss_pred CCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch-------------hcccCCccccCccChHHHhcCCCCCCcch
Confidence 99999999999999999999999999999765322110 11234579999999999987444578999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
|||||+++|||++ ||....................+.+...++.+.+||++||+.||.+|||+.++++|+||.+..
T Consensus 191 i~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 269 (276)
T 2yex_A 191 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 269 (276)
T ss_dssp HHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred HHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChh
Confidence 9999999999996 776544332222333333333344566788999999999999999999999999999998753
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-40 Score=386.50 Aligned_cols=258 Identities=25% Similarity=0.378 Sum_probs=205.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC--CCCeeeeeeeeeecCccccC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ--HQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~--HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.+|++.+.||+|+||+||+|.+. +++.||||++............+.+|+.+|+.++ ||||+++++++..
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~------- 127 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT------- 127 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-------
T ss_pred CceEEEEEEccCCCeEEEEEEcC-CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEec-------
Confidence 46999999999999999999987 4999999999876666666778999999999996 5999999988742
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+|||+++++|.+++.....+++.+++.++.||+.||+|||++
T Consensus 128 ---------------------------------~~~~~lv~E~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~ 174 (390)
T 2zmd_A 128 ---------------------------------DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174 (390)
T ss_dssp ---------------------------------SSEEEEEEECCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred ---------------------------------CCEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 34689999977789999999888999999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC---------
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--------- 609 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--------- 609 (1196)
||+||||||+|||++ ++.+||+|||+++.+..... .......+||+.|+|||++.+.
T Consensus 175 ~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~ 240 (390)
T 2zmd_A 175 GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT-------------SVVKDSQVGAVNYMPPEAIKDMSSSRENGKS 240 (390)
T ss_dssp TCCCCCCCGGGEEES-SSCEEECCCSSSCCC----------------------CCSCCCGGGCCHHHHHCC---------
T ss_pred CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc-------------cccCCCCCcCCCccChHHhhhcccccccccc
Confidence 999999999999995 58999999999986532210 1112346899999999998751
Q ss_pred -CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 610 -PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 610 -~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
..|+.++|||||||+||||++ ||............+.......+.....++++.+||++||+.||.+|||+.++|+
T Consensus 241 ~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 241 KSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 358899999999999999997 8865433322222222121111122233568999999999999999999999999
Q ss_pred ccCCCCch
Q 000993 686 DALPPQME 693 (1196)
Q Consensus 686 ~~~~~~~~ 693 (1196)
|+|+....
T Consensus 321 hp~~~~~~ 328 (390)
T 2zmd_A 321 HPYVQIQT 328 (390)
T ss_dssp SHHHHSCC
T ss_pred CcCccccC
Confidence 99986543
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-40 Score=367.04 Aligned_cols=252 Identities=29% Similarity=0.492 Sum_probs=209.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.+++|++.+.||+|+||.||+|.+..+++.||||++..... .......+.+|+.+++.++||||++++++|.+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 80 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD------ 80 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC------
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEec------
Confidence 46899999999999999999999999999999999864321 11234568899999999999999999998732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+||||++ ++|.+++.....+++..++.++.||+.||+|||
T Consensus 81 ----------------------------------~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH 126 (279)
T 3fdn_A 81 ----------------------------------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126 (279)
T ss_dssp ----------------------------------SSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 356899999997 599999998889999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++.+||+|||++...... ......||+.|+|||++.+ ..++.++
T Consensus 127 ~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~ 188 (279)
T 3fdn_A 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----------------RRTDLCGTLDYLPPEMIEG-RMHDEKV 188 (279)
T ss_dssp TTTCEECCCCGGGEEECTTSCEEECSCCEESCC-------------------------CCCCTTCCHHHHTT-CCCCTTH
T ss_pred hCCEecccCChHhEEEcCCCCEEEEeccccccCCcc-----------------cccccCCCCCccCHhHhcc-CCCCccc
Confidence 999999999999999999999999999998643211 1234578999999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
||||||+++|+|++ ||...................|. ..++.+.+||.+||+.||.+|||+.++++|+|+..
T Consensus 189 Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~ 263 (279)
T 3fdn_A 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263 (279)
T ss_dssp HHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCT---TSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHH
T ss_pred hhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCCC---cCCHHHHHHHHHHhccChhhCCCHHHHhhCccccC
Confidence 99999999999996 78766555544444333333332 35678999999999999999999999999998754
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=364.36 Aligned_cols=253 Identities=26% Similarity=0.447 Sum_probs=214.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++.+.||+|+||.||+|.++.++..||+|++..... ...+.+.+|+.+++.++||||++++++|.+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------- 77 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV--EDVDRFKQEIEIMKSLDHPNIIRLYETFED------- 77 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEec-------
Confidence 45789999999999999999999999999999999975433 235678999999999999999999998732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||+
T Consensus 78 ---------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~ 124 (277)
T 3f3z_A 78 ---------------------------------NTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK 124 (277)
T ss_dssp ---------------------------------SSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCeEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 456899999996 5999999888889999999999999999999999
Q ss_pred CCCcccCCCcCcEEe---cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 538 QGIIHRDLTPNNIFF---DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 538 ~gIiHrDLKp~NILl---d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
+||+||||||+|||+ +.++.+||+|||++....... ......||+.|+|||++.+ .++.
T Consensus 125 ~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~----------------~~~~~~~t~~y~aPE~~~~--~~~~ 186 (277)
T 3f3z_A 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK----------------MMRTKVGTPYYVSPQVLEG--LYGP 186 (277)
T ss_dssp TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS----------------CBCCCCSCTTTCCHHHHTT--CBCT
T ss_pred CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc----------------chhccCCCCCccChHHhcc--cCCc
Confidence 999999999999999 778899999999997643211 1234579999999999986 4899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
++||||||+++|+|++ ||......+............+. .+...++.+.+||++||+.||.+|||+.++++|+||.
T Consensus 187 ~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~ 266 (277)
T 3f3z_A 187 ECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFE 266 (277)
T ss_dssp THHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHH
T ss_pred hhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHh
Confidence 9999999999999996 88776666555554443333333 3346778999999999999999999999999999886
Q ss_pred C
Q 000993 691 Q 691 (1196)
Q Consensus 691 ~ 691 (1196)
+
T Consensus 267 ~ 267 (277)
T 3f3z_A 267 K 267 (277)
T ss_dssp H
T ss_pred c
Confidence 4
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-40 Score=398.45 Aligned_cols=256 Identities=26% Similarity=0.414 Sum_probs=214.6
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
...+++|.+.+.||+|+||.||+|++..+|+.||||+++.... .......+.+|+.+|+.++||||+++++++..
T Consensus 12 ~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~---- 87 (476)
T 2y94_A 12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST---- 87 (476)
T ss_dssp CCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEEC----
T ss_pred CceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE----
Confidence 3456899999999999999999999999999999999975321 11234678999999999999999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|+|||||+ ++|.+++...+.+++..++.++.||+.||+|
T Consensus 88 ------------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~ 131 (476)
T 2y94_A 88 ------------------------------------PSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDY 131 (476)
T ss_dssp ------------------------------------SSEEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 356899999996 5999999988899999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++++||+|||+++...... .....+||+.|+|||++.+...++.
T Consensus 132 LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~~~~ 195 (476)
T 2y94_A 132 CHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE----------------FLRTSCGSPNYAAPEVISGRLYAGP 195 (476)
T ss_dssp HHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC----------------CBCCCCSCSTTCCHHHHTTCCBCSH
T ss_pred HHHCCCCcccccHHHEEEecCCCeEEEeccchhhccccc----------------cccccCCCcCeEChhhccCCCCCCC
Confidence 999999999999999999999999999999998643211 1234589999999999998544578
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
++|||||||++|+|++ ||...........+.......| ...++++.+||++||+.||.+|||+.++++|+||.+
T Consensus 196 ~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p---~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~ 272 (476)
T 2y94_A 196 EVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTP---QYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQ 272 (476)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCC---TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHT
T ss_pred cceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCC---ccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhh
Confidence 9999999999999996 8876655555444443333233 345679999999999999999999999999999865
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-40 Score=372.79 Aligned_cols=268 Identities=26% Similarity=0.430 Sum_probs=206.0
Q ss_pred CCcccCCceEE-eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecC
Q 000993 376 SSRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 376 ~~~~~~~y~~~-~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~ 453 (1196)
.+++.+.|.+. +.||+|+||.||+|++..+++.||||++.... ......+.+|+.+++++ +||||+++++++.+
T Consensus 7 ~~~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~-- 82 (316)
T 2ac3_A 7 SGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP--GHIRSRVFREVEMLYQCQGHRNVLELIEFFEE-- 82 (316)
T ss_dssp CCCTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEE--
T ss_pred CcccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--chhHHHHHHHHHHHHHhcCCCCeeeEEEEEee--
Confidence 45677889986 78999999999999999999999999997543 23456789999999985 79999999998733
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL 532 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||
T Consensus 83 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l 124 (316)
T 2ac3_A 83 --------------------------------------EDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASAL 124 (316)
T ss_dssp --------------------------------------TTEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence 356899999997 69999999888999999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCC---eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~---vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
+|||++||+||||||+|||++.++. +||+|||+++........... ........+||+.|+|||++.+.
T Consensus 125 ~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~--------~~~~~~~~~gt~~y~aPE~~~~~ 196 (316)
T 2ac3_A 125 DFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPI--------STPELLTPCGSAEYMAPEVVEAF 196 (316)
T ss_dssp HHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---------------------------CCSGGGCCHHHHHHT
T ss_pred HHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccc--------cccccccccCCcCccChHHhhcc
Confidence 9999999999999999999998776 999999999865322110000 00112345799999999998741
Q ss_pred ----CCCCCcchhHHHHHHHHHhhc---CCchhH---------------HHHHHHHHhhhcCCCCC-ccccCCHHHHHHH
Q 000993 610 ----PKIDEKADMYSLGIVFFELWH---PFSTAM---------------ERQIVLSDLKQKGELPP-SWVAKFSEQESLL 666 (1196)
Q Consensus 610 ----~~~s~ksDVwSlGviLyELlt---Pf~~~~---------------~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI 666 (1196)
..++.++|||||||++|||++ ||.... ...............|. .+...++.+.+||
T Consensus 197 ~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 276 (316)
T 2ac3_A 197 SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLI 276 (316)
T ss_dssp SHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHH
T ss_pred cccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHH
Confidence 247899999999999999996 775432 11122222222223332 2345678999999
Q ss_pred HHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 667 RRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 667 ~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
++||+.||.+|||+.++++|+||.+..
T Consensus 277 ~~~L~~dP~~Rps~~e~l~hp~~~~~~ 303 (316)
T 2ac3_A 277 SKLLVRDAKQRLSAAQVLQHPWVQGCA 303 (316)
T ss_dssp HHHSCSSTTTSCCHHHHHHSTTCC---
T ss_pred HHHhhCChhhCCCHHHHhcChhhcCCC
Confidence 999999999999999999999998754
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-40 Score=379.48 Aligned_cols=255 Identities=25% Similarity=0.457 Sum_probs=191.1
Q ss_pred CcccCCceEE---eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeec
Q 000993 377 SRYLNDFEEL---QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFET 452 (1196)
Q Consensus 377 ~~~~~~y~~~---~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~ 452 (1196)
+.+.++|++. +.||+|+||.||+|.++.+|+.||||++... ....+.+|+.+++.+. ||||++++++|.+
T Consensus 4 ~~f~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~- 77 (325)
T 3kn6_A 4 SPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHD- 77 (325)
T ss_dssp CHHHHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-
T ss_pred CcchhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEc-
Confidence 3445667775 7899999999999999999999999998632 3467889999999997 9999999998732
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~g 531 (1196)
...+|+|||||+ ++|.+++.....+++.+++.++.||+.|
T Consensus 78 ---------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~ 118 (325)
T 3kn6_A 78 ---------------------------------------QLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSA 118 (325)
T ss_dssp ---------------------------------------SSEEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHH
T ss_pred ---------------------------------------CCEEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 456899999996 4999999998899999999999999999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCCC---CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~~---~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
|+|||++||+||||||+|||++.++ .+||+|||+++...... ......+||+.|+|||++.+
T Consensus 119 l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~ 183 (325)
T 3kn6_A 119 VSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN---------------QPLKTPCFTLHYAAPELLNQ 183 (325)
T ss_dssp HHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------------------------------------
T ss_pred HHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC---------------CcccccCCCcCccCHHHhcC
Confidence 9999999999999999999998765 79999999997543211 11234578999999999987
Q ss_pred CCCCCCcchhHHHHHHHHHhhc---CCchhHH-------HHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCC
Q 000993 609 WPKIDEKADMYSLGIVFFELWH---PFSTAME-------RQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDR 677 (1196)
Q Consensus 609 ~~~~s~ksDVwSlGviLyELlt---Pf~~~~~-------~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~R 677 (1196)
..++.++|||||||++|+|++ ||..... .+............+ +.+...++++.+||++||+.||.+|
T Consensus 184 -~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 262 (325)
T 3kn6_A 184 -NGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKR 262 (325)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTC
T ss_pred -CCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHC
Confidence 568999999999999999996 7765432 222222222222222 2445678899999999999999999
Q ss_pred CCHHHHHhccCCCCc
Q 000993 678 PSATELLQDALPPQM 692 (1196)
Q Consensus 678 Pta~eiL~~~~~~~~ 692 (1196)
||+.++++|+|+...
T Consensus 263 pt~~ell~h~w~~~~ 277 (325)
T 3kn6_A 263 LKMSGLRYNEWLQDG 277 (325)
T ss_dssp CCTTTSTTCGGGCTT
T ss_pred CCHHHHhcChhhccC
Confidence 999999999999864
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-40 Score=375.86 Aligned_cols=264 Identities=26% Similarity=0.413 Sum_probs=210.2
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
....++|++.+.||+|+||.||+|++..+++.||||+++.... .......+.+|+.+++.++||||+++++++....
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-- 85 (311)
T 3ork_A 8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET-- 85 (311)
T ss_dssp SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE--
T ss_pred ceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC--
Confidence 4556899999999999999999999999999999999976443 3334567899999999999999999999875421
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
.....+|+|||||+ ++|.+++.....+++..++.++.||+.||+|
T Consensus 86 ----------------------------------~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~ 131 (311)
T 3ork_A 86 ----------------------------------PAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131 (311)
T ss_dssp ----------------------------------TTEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 11345799999996 5999999988899999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++.+||+|||+++.+...... .......+||+.|+|||++.+ ..++.
T Consensus 132 lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~-~~~~~ 198 (311)
T 3ork_A 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS------------VTQTAAVIGTAQYLSPEQARG-DSVDA 198 (311)
T ss_dssp HHHTTCCCCCCCGGGEEEETTSCEEECCCSCC------------------------------CCTTCCHHHHHT-CCCCH
T ss_pred HHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccccc------------cccccccCcCcccCCHHHhcC-CCCCc
Confidence 99999999999999999999999999999999865432110 112234579999999999988 57899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
++|||||||++|||++ ||...................+. .....++++.+||.+||+.||.+||++.++++|+|+
T Consensus 199 ~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 277 (311)
T 3ork_A 199 RSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV 277 (311)
T ss_dssp HHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred hHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHH
Confidence 9999999999999997 88777666655555443322221 223467899999999999999999999999998754
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=378.84 Aligned_cols=252 Identities=25% Similarity=0.405 Sum_probs=209.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+.|+.++.||+|+||.||+|++..+|+.||||++...... ....+.+.+|+.+|+.++||||++++++|..
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------- 125 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-------- 125 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--------
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE--------
Confidence 4599999999999999999999999999999999765432 3344678999999999999999999998843
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+|||||.|+|.+++.. ...+++..++.++.||+.||+|||++
T Consensus 126 --------------------------------~~~~~lv~e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 173 (348)
T 1u5q_A 126 --------------------------------EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 173 (348)
T ss_dssp --------------------------------TTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCeEEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 356899999999999888864 56799999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--CCCCCCcc
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 616 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~s~ks 616 (1196)
||+||||||+|||++.++.+||+|||+++.... ....+||+.|+|||++.+ ...++.++
T Consensus 174 ~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-------------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~ 234 (348)
T 1u5q_A 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------------------ANSFVGTPYWMAPEVILAMDEGQYDGKV 234 (348)
T ss_dssp TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-------------------BCCCCSCGGGCCHHHHHTTSSCCBCTHH
T ss_pred CeeeCCCCHHHEEECCCCCEEEeeccCceecCC-------------------CCcccCCcceeCHhhhccccCCCCCcHH
Confidence 999999999999999999999999999975421 124579999999999853 24689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|||||||++|||++ ||.............. ....+......++.+.+||.+||+.||.+|||+.++++|+|+...
T Consensus 235 DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~ 312 (348)
T 1u5q_A 235 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-NESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 312 (348)
T ss_dssp HHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-SCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred HHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhcc
Confidence 99999999999996 7766555444433333 222222233456789999999999999999999999999987543
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-39 Score=364.62 Aligned_cols=264 Identities=24% Similarity=0.412 Sum_probs=216.6
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-------chhHHHHHHHHHHHHhcC-CCCeeeeeee
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-------LPVNDRILREVATLSRLQ-HQHVVRYYQA 448 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-------~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~ 448 (1196)
..+.++|++.+.||+|+||.||+|+++.+|+.||||+++..... ....+.+.+|+.+++.+. ||||++++++
T Consensus 13 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 92 (298)
T 1phk_A 13 HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT 92 (298)
T ss_dssp --CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred cchhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeee
Confidence 45678999999999999999999999999999999999765321 123456889999999995 9999999988
Q ss_pred eeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHH
Q 000993 449 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQ 527 (1196)
Q Consensus 449 ~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~q 527 (1196)
+.. ...+|+|||||+ ++|.+++.....+++..++.++.|
T Consensus 93 ~~~----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~q 132 (298)
T 1phk_A 93 YET----------------------------------------NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132 (298)
T ss_dssp EEC----------------------------------------SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHH
T ss_pred ecc----------------------------------------CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHH
Confidence 732 456899999997 599999998889999999999999
Q ss_pred HHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 528 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 528 Ia~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
|+.||+|||++||+||||||+||+++.++.+||+|||+++...... ......||+.|+|||++.
T Consensus 133 i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~ 196 (298)
T 1phk_A 133 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE----------------KLREVCGTPSYLAPEIIE 196 (298)
T ss_dssp HHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC----------------CBCCCCSCGGGCCHHHHH
T ss_pred HHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcCCCc----------------ccccccCCccccCHHHhc
Confidence 9999999999999999999999999999999999999997643211 123457899999999986
Q ss_pred -----CCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCC
Q 000993 608 -----GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRP 678 (1196)
Q Consensus 608 -----~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RP 678 (1196)
....++.++||||||+++|+|++ ||...................+ +.+...++.+.+||.+||+.||.+||
T Consensus 197 ~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp 276 (298)
T 1phk_A 197 CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRY 276 (298)
T ss_dssp HHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSC
T ss_pred cccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCC
Confidence 22458899999999999999996 7766555544444443333333 34556788999999999999999999
Q ss_pred CHHHHHhccCCCCchHHH
Q 000993 679 SATELLQDALPPQMEYEL 696 (1196)
Q Consensus 679 ta~eiL~~~~~~~~~~~~ 696 (1196)
|+.++++|+||.+...+.
T Consensus 277 s~~~ll~h~~~~~~~~~~ 294 (298)
T 1phk_A 277 TAEEALAHPFFQQYVVEE 294 (298)
T ss_dssp CHHHHTTSGGGCTTC---
T ss_pred CHHHHHhChHhhhccchh
Confidence 999999999999876543
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=380.92 Aligned_cols=261 Identities=25% Similarity=0.391 Sum_probs=210.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|.+.+.||+|+||.||+|.++.+|+.||||++............+.+|+.+++.++||||++++++|.....
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---- 115 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASS---- 115 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSS----
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCC----
Confidence 3478999999999999999999999999999999998655555566789999999999999999999998843210
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
......+|+|||||+++|.+++. ..+++..++.++.||+.||+|||++
T Consensus 116 ------------------------------~~~~~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~ 163 (371)
T 4exu_A 116 ------------------------------LRNFYDFYLVMPFMQTDLQKIMG--MEFSEEKIQYLVYQMLKGLKYIHSA 163 (371)
T ss_dssp ------------------------------STTCCCCEEEEECCCEEHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ------------------------------cccceeEEEEEccccccHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 01122458999999999988874 3499999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++..... ....+||+.|+|||++.+...++.++||
T Consensus 164 ~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~------------------~~~~~~t~~y~aPE~~~~~~~~~~~~Di 225 (371)
T 4exu_A 164 GVVHRDLKPGNLAVNEDCELKILDFGLARHADAE------------------MTGYVVTRWYRAPEVILSWMHYNQTVDI 225 (371)
T ss_dssp TCCCSCCCGGGEEECTTCCEEECSTTCC--------------------------CTTCCCTTSCHHHHSCCSCCCTTHHH
T ss_pred CCcCCCcCHHHeEECCCCCEEEEecCcccccccC------------------cCCcccCccccCHHHhcCCCCCCcHHhH
Confidence 9999999999999999999999999999754211 2345789999999999875678999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC----------------------------CccccCCHHHHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP----------------------------PSWVAKFSEQESLLR 667 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p----------------------------~~~~~~~~~l~~LI~ 667 (1196)
|||||++|+|++ ||......+.........+..+ ..+...++.+.+||+
T Consensus 226 wslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (371)
T 4exu_A 226 WSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLE 305 (371)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHH
Confidence 999999999996 8876555444433322111111 112345778999999
Q ss_pred HcccCCCCCCCCHHHHHhccCCCCch
Q 000993 668 RLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 668 ~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
+||+.||.+|||+.++|+||||....
T Consensus 306 ~~L~~dP~~Rpt~~ell~hp~f~~~~ 331 (371)
T 4exu_A 306 KMLELDVDKRLTAAQALTHPFFEPFR 331 (371)
T ss_dssp HHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred HHCCCChhhcCCHHHHhcCcccccCC
Confidence 99999999999999999999998653
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-39 Score=379.02 Aligned_cols=263 Identities=24% Similarity=0.362 Sum_probs=210.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++++.||+|+||.||+|++..+++.||||++... ........+.+|+.+|+.++||||+++++++....
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------- 98 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF-EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT------- 98 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT-TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSS-------
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc-cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCC-------
Confidence 5899999999999999999999999999999998743 33445578999999999999999999998874321
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
......+|+||||++++|.+++.. ..+++..++.++.||+.||+|||++||
T Consensus 99 ----------------------------~~~~~~~~iv~e~~~~~L~~~l~~-~~~~~~~~~~i~~qi~~aL~~LH~~~i 149 (364)
T 3qyz_A 99 ----------------------------IEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 149 (364)
T ss_dssp ----------------------------TTTCCCEEEEEECCSEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred ----------------------------ccccceEEEEEcccCcCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 012346899999999999998865 469999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+||||||+|||++.++.+||+|||+++........ .......+||+.|+|||++.+...++.++||||
T Consensus 150 vH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diws 217 (364)
T 3qyz_A 150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH------------TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 217 (364)
T ss_dssp ECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCB------------CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHH
T ss_pred ecCCCChHhEEECCCCCEEEEeCcceEecCCCCCc------------cccccccccccCCCCCHHhcCCCCCCcchhHHH
Confidence 99999999999999999999999999865432110 011244589999999999876566899999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC--------------------------C--CccccCCHHHHHHHHHc
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQKGEL--------------------------P--PSWVAKFSEQESLLRRL 669 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~--------------------------p--~~~~~~~~~l~~LI~~c 669 (1196)
|||++|+|++ ||................+.. + ..+...++++.+||++|
T Consensus 218 lG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 297 (364)
T 3qyz_A 218 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 297 (364)
T ss_dssp HHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHH
Confidence 9999999996 776544332222221111100 0 01134567899999999
Q ss_pred ccCCCCCCCCHHHHHhccCCCCc
Q 000993 670 MSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 670 L~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|+.||.+|||+.++|+||||.+.
T Consensus 298 L~~dP~~R~t~~e~l~hp~~~~~ 320 (364)
T 3qyz_A 298 LTFNPHKRIEVEQALAHPYLEQY 320 (364)
T ss_dssp TCSSTTTSCCHHHHHTSGGGTTT
T ss_pred cCCChhhCCCHHHHhcCcchhhc
Confidence 99999999999999999999875
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-40 Score=381.83 Aligned_cols=253 Identities=24% Similarity=0.405 Sum_probs=206.7
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCcc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~ 455 (1196)
..+.++|++.+.||+|+||+||+|.++.+|+.||||++...... ..+|+.++..+ +||||++++++|.
T Consensus 18 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------~~~E~~~l~~~~~hp~iv~~~~~~~----- 86 (342)
T 2qr7_A 18 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD------PTEEIEILLRYGQHPNIITLKDVYD----- 86 (342)
T ss_dssp -CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC------CHHHHHHHHHHTTSTTBCCEEEEEE-----
T ss_pred cCccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC------hHHHHHHHHHhcCCCCcCeEEEEEE-----
Confidence 44568899999999999999999999999999999999754332 34688888888 7999999999873
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
+...+|+|||||. |+|.+++.....+++..++.++.||+.||+|
T Consensus 87 -----------------------------------~~~~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~ 131 (342)
T 2qr7_A 87 -----------------------------------DGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEY 131 (342)
T ss_dssp -----------------------------------CSSEEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------cCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 2457899999996 5999999988899999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCC-C---CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDAR-N---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~-~---~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 610 (1196)
||++||+||||||+|||+..+ + .+||+|||+++...... ......+||+.|+|||++.+ .
T Consensus 132 lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~ 195 (342)
T 2qr7_A 132 LHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN---------------GLLMTPCYTANFVAPEVLER-Q 195 (342)
T ss_dssp HHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT---------------CCBCCSSCCSSCCCHHHHHH-H
T ss_pred HHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC---------------CceeccCCCccccCHHHhcC-C
Confidence 999999999999999998543 3 49999999998653211 01234589999999999987 4
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchh---HHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHH
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTA---MERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATEL 683 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~---~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~ei 683 (1196)
.|+.++|||||||++|||++ ||... ...+....+.......+. .+...++++.+||++||..||.+|||+.++
T Consensus 196 ~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~i 275 (342)
T 2qr7_A 196 GYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALV 275 (342)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred CCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 58899999999999999996 77642 233333333333333332 455678899999999999999999999999
Q ss_pred HhccCCCC
Q 000993 684 LQDALPPQ 691 (1196)
Q Consensus 684 L~~~~~~~ 691 (1196)
++|+|+..
T Consensus 276 l~hp~~~~ 283 (342)
T 2qr7_A 276 LRHPWIVH 283 (342)
T ss_dssp TTSHHHHT
T ss_pred hcCCeecC
Confidence 99999854
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-39 Score=387.11 Aligned_cols=256 Identities=22% Similarity=0.340 Sum_probs=207.0
Q ss_pred CCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc------CCCCeeeeeee
Q 000993 375 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL------QHQHVVRYYQA 448 (1196)
Q Consensus 375 ~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L------~HpnIV~l~~~ 448 (1196)
+......+|++++.||+|+||+||+|.+..+++.||||+++. .......+.+|+.+++.+ +||||++++++
T Consensus 91 ~~~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~ 167 (429)
T 3kvw_A 91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRN---EKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLEN 167 (429)
T ss_dssp TTCEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEE
T ss_pred CCCcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECC---ccchHHHHHHHHHHHHHHhhccccCCcCEEEEEee
Confidence 344556789999999999999999999999999999999863 234456788899888887 57799999988
Q ss_pred eeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC--CCCHHHHHHHHH
Q 000993 449 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFR 526 (1196)
Q Consensus 449 ~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~ 526 (1196)
|.. ...+|+|||||+++|.+++.... .+++..++.++.
T Consensus 168 ~~~----------------------------------------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~ 207 (429)
T 3kvw_A 168 FTF----------------------------------------RNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAH 207 (429)
T ss_dssp EEE----------------------------------------TTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHH
T ss_pred ccc----------------------------------------CCeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHH
Confidence 732 35689999999999999997654 499999999999
Q ss_pred HHHHHHHHHHhCCCcccCCCcCcEEecCCCC--eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCch
Q 000993 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARND--IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 604 (1196)
Q Consensus 527 qIa~gL~yLHs~gIiHrDLKp~NILld~~~~--vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 604 (1196)
||+.||+|||++||+||||||+|||++.++. +||+|||+|+.... .....+||+.|+|||
T Consensus 208 qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~------------------~~~~~~gt~~y~aPE 269 (429)
T 3kvw_A 208 SILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ------------------RVYTYIQSRFYRAPE 269 (429)
T ss_dssp HHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTC------------------CCCSSCSCGGGCCHH
T ss_pred HHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCC------------------cccccCCCCCccChH
Confidence 9999999999999999999999999999887 99999999965321 123458999999999
Q ss_pred hccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCc---------------------------
Q 000993 605 IEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPS--------------------------- 654 (1196)
Q Consensus 605 ~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~--------------------------- 654 (1196)
++.+ ..|+.++|||||||+||||++ ||......+.........+..++.
T Consensus 270 ~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (429)
T 3kvw_A 270 VILG-ARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLS 348 (429)
T ss_dssp HHHT-BCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCC
T ss_pred HHhC-CCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccc
Confidence 9988 568999999999999999997 776655544433322211111100
Q ss_pred ------------------------c-----ccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 655 ------------------------W-----VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 655 ------------------------~-----~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
| ...++.+.+||++||+.||.+|||+.++|+||||.+.
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~ 415 (429)
T 3kvw_A 349 DGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRR 415 (429)
T ss_dssp C--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC--
T ss_pred cccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccC
Confidence 0 0125678999999999999999999999999999875
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-40 Score=411.94 Aligned_cols=260 Identities=26% Similarity=0.382 Sum_probs=222.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~ 456 (1196)
.+++|++++.||+|+||+||+|+++.+++.||||+++.... .......+.+|..+|..+ +||||++++++|.
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~------ 412 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ------ 412 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECB------
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEE------
Confidence 46899999999999999999999999999999999974321 112345678899999988 7999999998872
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
+...+|||||||+ |+|.+++...+.+++..++.++.||+.||+||
T Consensus 413 ----------------------------------~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~L 458 (674)
T 3pfq_A 413 ----------------------------------TMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFL 458 (674)
T ss_dssp ----------------------------------CSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------eCCEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 3467899999996 59999999888999999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+||||+.++++||+|||+|+...... ......+||+.|+|||++.+ ..|+.+
T Consensus 459 H~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~---------------~~~~~~~GT~~Y~APE~l~~-~~~~~~ 522 (674)
T 3pfq_A 459 QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---------------VTTKTFCGTPDYIAPEIIAY-QPYGKS 522 (674)
T ss_dssp HHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT---------------CCBCCCCSCSSSCCHHHHTC-CCBSTH
T ss_pred HhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCC---------------cccccccCCCcccCHhhhcC-CCCCcc
Confidence 99999999999999999999999999999997532111 12345689999999999987 579999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH-----HHHHhcc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-----TELLQDA 687 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta-----~eiL~~~ 687 (1196)
+|||||||+||||++ ||......+....++.....+|. ..++++.+||++||+.||.+||++ ++|++|+
T Consensus 523 ~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ 599 (674)
T 3pfq_A 523 VDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK---SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHA 599 (674)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCT---TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSG
T ss_pred ceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCc---cCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCc
Confidence 999999999999996 89887777777666665555554 456799999999999999999997 9999999
Q ss_pred CCCCchHHHH
Q 000993 688 LPPQMEYELL 697 (1196)
Q Consensus 688 ~~~~~~~~~~ 697 (1196)
||..+.|+.+
T Consensus 600 ff~~i~w~~l 609 (674)
T 3pfq_A 600 FFRYIDWEKL 609 (674)
T ss_dssp GGSSCCHHHH
T ss_pred cccCCCHHHH
Confidence 9999988755
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-40 Score=379.86 Aligned_cols=251 Identities=27% Similarity=0.400 Sum_probs=209.3
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCch------hHHHHHHHHHHHHhcCCCCeeeeeeeee
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP------VNDRILREVATLSRLQHQHVVRYYQAWF 450 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~------~~~~~~~Ev~iL~~L~HpnIV~l~~~~~ 450 (1196)
+.+.++|++.+.||+|+||.||+|+++.+|+.||||+++....... ....+.+|+.+|+.++||||++++++|.
T Consensus 20 ~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~ 99 (335)
T 3dls_A 20 GEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFE 99 (335)
T ss_dssp THHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEE
T ss_pred cccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 4567899999999999999999999999999999999986542211 2345778999999999999999999873
Q ss_pred ecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-C-CHHHHHhhcCCCCHHHHHHHHHHH
Q 000993 451 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-R-TLRQVFESYDHFDKELAWHLFRQI 528 (1196)
Q Consensus 451 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-g-sL~~~l~~~~~l~e~~~~~i~~qI 528 (1196)
+ ...+|+||||++ | +|.+++.....+++..++.++.||
T Consensus 100 ~----------------------------------------~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi 139 (335)
T 3dls_A 100 N----------------------------------------QGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQL 139 (335)
T ss_dssp C----------------------------------------SSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHH
T ss_pred e----------------------------------------CCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHH
Confidence 2 457899999985 5 899999988899999999999999
Q ss_pred HHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 529 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 529 a~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
+.||+|||++||+||||||+|||++.++.+||+|||+++...... .....+||+.|+|||++.+
T Consensus 140 ~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~ 203 (335)
T 3dls_A 140 VSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK----------------LFYTFCGTIEYCAPEVLMG 203 (335)
T ss_dssp HHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTC----------------CBCEECSCGGGCCHHHHTT
T ss_pred HHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCCCC----------------ceeccCCCccccChhhhcC
Confidence 999999999999999999999999999999999999997653211 1234579999999999988
Q ss_pred CCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 609 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 609 ~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
...++.++|||||||++|||++ ||...... .. .. .......++++.+||++||+.||.+|||+.++++
T Consensus 204 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~-~~--~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~ 274 (335)
T 3dls_A 204 NPYRGPELEMWSLGVTLYTLVFEENPFCELEET------VE-AA--IHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVT 274 (335)
T ss_dssp CCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------TT-TC--CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------Hh-hc--cCCCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 5445889999999999999996 77653321 11 11 1122235679999999999999999999999999
Q ss_pred ccCCCCc
Q 000993 686 DALPPQM 692 (1196)
Q Consensus 686 ~~~~~~~ 692 (1196)
|+|+.+.
T Consensus 275 hp~~~~~ 281 (335)
T 3dls_A 275 DPWVTQP 281 (335)
T ss_dssp CTTTTCC
T ss_pred CccccCC
Confidence 9999764
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-40 Score=401.07 Aligned_cols=258 Identities=27% Similarity=0.412 Sum_probs=213.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.++|++.+.||+|+||.||+|+++.+|+.||||++..... .......+.+|+.+|+.++|||||+++++|.
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~-------- 254 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE-------- 254 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEE--------
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEe--------
Confidence 4789999999999999999999999999999999975321 1123456889999999999999999998873
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yL 535 (1196)
+...+|+|||||+ |+|.+++.... .+++..++.++.||+.||+||
T Consensus 255 --------------------------------~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yL 302 (576)
T 2acx_A 255 --------------------------------TKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDL 302 (576)
T ss_dssp --------------------------------CSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------eCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 59999987654 499999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+|||++.++++||+|||+|+...... .....+||+.|+|||++.+ ..|+.+
T Consensus 303 H~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~----------------~~~~~~GT~~Y~APEvl~~-~~~~~~ 365 (576)
T 2acx_A 303 HRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ----------------TIKGRVGTVGYMAPEVVKN-ERYTFS 365 (576)
T ss_dssp HHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC----------------CEECCCSCGGGCCHHHHTT-CEESSH
T ss_pred HHCCEeccCCchheEEEeCCCCeEEEecccceecccCc----------------cccccCCCccccCHHHHcC-CCCCcc
Confidence 99999999999999999999999999999997643211 1234589999999999988 568999
Q ss_pred chhHHHHHHHHHhhc---CCchhH----HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHH
Q 000993 616 ADMYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATEL 683 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~----~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~ei 683 (1196)
+|||||||++|||++ ||.... ..............+| ...++++++||++||+.||.+|| +++++
T Consensus 366 ~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p---~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~ei 442 (576)
T 2acx_A 366 PDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYS---ERFSPQARSLCSQLLCKDPAERLGCRGGSAREV 442 (576)
T ss_dssp HHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHH
T ss_pred chHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCC---ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHH
Confidence 999999999999996 886542 1222222222222222 34678999999999999999999 89999
Q ss_pred HhccCCCCchHHHH
Q 000993 684 LQDALPPQMEYELL 697 (1196)
Q Consensus 684 L~~~~~~~~~~~~~ 697 (1196)
++|+||....+..+
T Consensus 443 l~HpfF~~i~w~~l 456 (576)
T 2acx_A 443 KEHPLFKKLNFKRL 456 (576)
T ss_dssp HTSGGGTTCCHHHH
T ss_pred HhChhhccCCHHHH
Confidence 99999999987644
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=385.78 Aligned_cols=257 Identities=26% Similarity=0.395 Sum_probs=205.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
..+|++.+.||+|+||.||+|+++.+|+.||||++..... ...+|+.+|+.++|||||+++++|...+.
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~E~~il~~l~hpniv~l~~~~~~~~~----- 121 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGE----- 121 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEEET-----
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch------hHHHHHHHHHHcCCCCccceeeEEeccCC-----
Confidence 3579999999999999999999999999999999864322 23479999999999999999998854310
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE----SYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~----~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
..+..++++|||||+++|.+++. ....+++..++.++.||+.||+||
T Consensus 122 -----------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~L 172 (420)
T 1j1b_A 122 -----------------------------KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172 (420)
T ss_dssp -----------------------------TTTEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------CCcceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 12345788999999998877664 346799999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCC-CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 536 HGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
|++||+||||||+|||++.+ +.+||+|||+++.+.... .....+||+.|+|||++.+...|+.
T Consensus 173 H~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~~t~~y~aPE~~~~~~~~~~ 236 (420)
T 1j1b_A 173 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------PNVSYICSRYYRAPELIFGATDYTS 236 (420)
T ss_dssp HTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC----------------CCCSCCSCTTSCCHHHHTTCSSCCT
T ss_pred HHCCccccCCChhhEEEeCCCCeEEeccchhhhhcccCC----------------CceeeeeCCCcCCHHHHcCCCCCCc
Confidence 99999999999999999965 568999999998643211 1234578999999999987557999
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhc-----------------CCCCC----cc-----ccCCHHHHHH
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK-----------------GELPP----SW-----VAKFSEQESL 665 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~-----------------~~~p~----~~-----~~~~~~l~~L 665 (1196)
++|||||||+||||++ ||...........++... ..+|. .| ...++++.+|
T Consensus 237 ~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~L 316 (420)
T 1j1b_A 237 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIAL 316 (420)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHH
T ss_pred hhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHH
Confidence 9999999999999996 787655444333332211 01111 01 2346789999
Q ss_pred HHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 666 LRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 666 I~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|++||..||.+|||+.++++|+||...
T Consensus 317 i~~~L~~dP~~R~t~~e~l~hp~f~~~ 343 (420)
T 1j1b_A 317 CSRLLEYTPTARLTPLEACAHSFFDEL 343 (420)
T ss_dssp HHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred HHHhccCChhHCCCHHHHhCCHhhccc
Confidence 999999999999999999999999764
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-39 Score=367.37 Aligned_cols=248 Identities=25% Similarity=0.381 Sum_probs=199.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||+||+|++ +|+.||||++............+.+|+.+|+.++||||+++++++.+
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------- 105 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ-------- 105 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred hhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE--------
Confidence 47899999999999999999987 48999999998666565666789999999999999999999998732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH---FDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~---l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|+|||||+ ++|.+++..... +++..++.++.||+.||+||
T Consensus 106 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~L 153 (309)
T 3p86_A 106 --------------------------------PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL 153 (309)
T ss_dssp --------------------------------TTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 345699999997 599999987653 99999999999999999999
Q ss_pred HhCC--CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 536 HGQG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 536 Hs~g--IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|++| |+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+ ..++
T Consensus 154 H~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~ 217 (309)
T 3p86_A 154 HNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF---------------LSSKSAAGTPEWMAPEVLRD-EPSN 217 (309)
T ss_dssp HTSSSCCCCTTCCGGGEEECTTCCEEECCCC--------------------------------CCTTSCHHHHTT-CCCC
T ss_pred HcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccc---------------cccccCCCCccccChhhhcC-CCCC
Confidence 9999 9999999999999999999999999997542211 11234579999999999988 5689
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++|||||||++|||++ ||......+....... ....+......++++.+||++||+.||.+|||+.++++.
T Consensus 218 ~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~ 292 (309)
T 3p86_A 218 EKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF-KCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDL 292 (309)
T ss_dssp TTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHH-SCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-cCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 99999999999999997 8877665554443322 223333334567899999999999999999999999863
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-39 Score=364.05 Aligned_cols=256 Identities=24% Similarity=0.395 Sum_probs=211.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc----hhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----PVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~----~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.++|++.+.||+|+||.||+|+++.+|+.||+|+++...... ...+.+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---- 79 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN---- 79 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC----
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecC----
Confidence 367999999999999999999999999999999997654221 135679999999999999999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|+||||++ ++|.+++.....+++..++.++.||+.||+|
T Consensus 80 ------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~ 123 (283)
T 3bhy_A 80 ------------------------------------KTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHY 123 (283)
T ss_dssp ------------------------------------SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 356899999996 6999999888889999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCC----CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARN----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 610 (1196)
||++||+||||||+||+++.++ .+||+|||+++...... ......||+.|+|||++.+ .
T Consensus 124 lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~ 186 (283)
T 3bhy_A 124 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN----------------EFKNIFGTPEFVAPEIVNY-E 186 (283)
T ss_dssp HHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC------------------------CCCGGGCCHHHHTT-C
T ss_pred HHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCC----------------cccccCCCcCccCcceecC-C
Confidence 9999999999999999998877 79999999997643211 1133579999999999987 5
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++.++||||||+++|+|++ ||......+............++ .+...++.+.+||++||+.||.+|||+.++++|
T Consensus 187 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 187 PLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred CCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 68999999999999999996 77766555444443333333332 334567789999999999999999999999999
Q ss_pred cCCCCc
Q 000993 687 ALPPQM 692 (1196)
Q Consensus 687 ~~~~~~ 692 (1196)
+|+...
T Consensus 267 ~~~~~~ 272 (283)
T 3bhy_A 267 SWIKAI 272 (283)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 987654
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=376.90 Aligned_cols=263 Identities=25% Similarity=0.389 Sum_probs=210.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC---CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD---KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~---~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
.++|++.+.||+|+||.||+|+++.+++.||+|++.... ......+.+.+|+.+++.++||||++++++|.+
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----- 99 (345)
T 3hko_A 25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED----- 99 (345)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc-----
Confidence 478999999999999999999999999999999986432 233456789999999999999999999998732
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------------------
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY---------------------- 513 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~---------------------- 513 (1196)
...+|+|||||+ ++|.+++...
T Consensus 100 -----------------------------------~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (345)
T 3hko_A 100 -----------------------------------EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPE 144 (345)
T ss_dssp -----------------------------------SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHH
T ss_pred -----------------------------------CCeEEEEEeCCCCCcHHHHHHHhhccccccccccccccccccccc
Confidence 456899999996 5999988521
Q ss_pred ------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCC--CeEEeccCcchhccccc
Q 000993 514 ------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN--DIKIGDFGLAKFLKLEQ 573 (1196)
Q Consensus 514 ------------------~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~--~vKL~DFGlA~~~~~~~ 573 (1196)
..+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+++.+....
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~ 224 (345)
T 3hko_A 145 CNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLN 224 (345)
T ss_dssp HHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTT
T ss_pred ccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccC
Confidence 1236778899999999999999999999999999999998776 89999999998653221
Q ss_pred cccCCCCCCCCCCccccCcCccccccCCCchhccCC-CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcC
Q 000993 574 LDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG 649 (1196)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~ 649 (1196)
.. .........||+.|+|||++.+. ..++.++|||||||++|||++ ||......+..........
T Consensus 225 ~~-----------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 293 (345)
T 3hko_A 225 NG-----------EYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKL 293 (345)
T ss_dssp CC-------------------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred cc-----------ccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhccc
Confidence 10 01123456799999999998752 468999999999999999996 8877666665555554443
Q ss_pred CCC-CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 650 ELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 650 ~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
..+ +.+...++.+.+||.+||+.||.+|||+.++++||||.+..
T Consensus 294 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~ 338 (345)
T 3hko_A 294 CFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFS 338 (345)
T ss_dssp CTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTS
T ss_pred ccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccCh
Confidence 333 34455788999999999999999999999999999987754
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-39 Score=373.47 Aligned_cols=259 Identities=25% Similarity=0.399 Sum_probs=208.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|.+.+.||+|+||.||+|+++.+|+.||||++............+.+|+.+++.++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----- 97 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASS----- 97 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSS-----
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccc-----
Confidence 478999999999999999999999999999999997655555556789999999999999999999998743210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
......+|+||||++++|.+++.. .+++..++.++.||+.||+|||++|
T Consensus 98 -----------------------------~~~~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~i~~qi~~al~~LH~~~ 146 (353)
T 3coi_A 98 -----------------------------LRNFYDFYLVMPFMQTDLQKIMGL--KFSEEKIQYLVYQMLKGLKYIHSAG 146 (353)
T ss_dssp -----------------------------GGGCCCCEEEEECCSEEGGGTTTS--CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -----------------------------cccceeEEEEeccccCCHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 011234699999999998887743 5999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+|||++.++.+||+|||+++..... .....||+.|+|||++.+...++.++|||
T Consensus 147 ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~------------------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~ 208 (353)
T 3coi_A 147 VVHRDLKPGNLAVNEDCELKILDFGLARHADAE------------------MTGYVVTRWYRAPEVILSWMHYNQTVDIW 208 (353)
T ss_dssp CCCSSCCGGGEEECTTCCEEECSTTCTTC--------------------------CCSBCCSCHHHHSCCSCCCTTHHHH
T ss_pred cccCCCCHHHEeECCCCcEEEeecccccCCCCC------------------ccccccCcCcCCHHHHhCcCCCCchhhHH
Confidence 999999999999999999999999999754211 23457899999999998756789999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhc----------------------------CCCCCccccCCHHHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQK----------------------------GELPPSWVAKFSEQESLLRR 668 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~----------------------------~~~p~~~~~~~~~l~~LI~~ 668 (1196)
||||++|+|++ ||................ ..++..+...++++.+||++
T Consensus 209 slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 288 (353)
T 3coi_A 209 SVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEK 288 (353)
T ss_dssp HHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHH
Confidence 99999999996 787654433322222110 11122234567899999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCc
Q 000993 669 LMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||+.||.+|||+.++++|+||...
T Consensus 289 ~L~~dp~~Rpt~~e~l~hp~f~~~ 312 (353)
T 3coi_A 289 MLELDVDKRLTAAQALTHPFFEPF 312 (353)
T ss_dssp HSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred HcCCCcccCCCHHHHhcCcchhhc
Confidence 999999999999999999999864
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-39 Score=379.05 Aligned_cols=288 Identities=24% Similarity=0.360 Sum_probs=206.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||+||+|++..+|+.||||++...... ..+|+.+|+.++|||||+++++|...+......
T Consensus 6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~------~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY------KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS------CCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch------HHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 36899999999999999999999999999999998643222 237999999999999999999986543100000
Q ss_pred CCcCCCCcccccccccccc--cccccccccccccccEEEEEeeecCCCHHHHHh----hcCCCCHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAA--SSADVTGQENKLESTYLYIQMEYCPRTLRQVFE----SYDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~----~~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
... .. .......... ...............++++|||||+++|.+.+. ....+++..++.++.||+.||+
T Consensus 80 ~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 80 PQP---PD-DHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp ----------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccc---cc-ccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 000 00 0000000000 000000000113456799999999998877765 3567999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEec-CCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFD-ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld-~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
|||++||+||||||+|||++ .++.+||+|||+|+...... ......||+.|+|||++.+...+
T Consensus 156 ~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~~t~~y~aPE~~~~~~~~ 219 (383)
T 3eb0_A 156 FIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE----------------PSVAYICSRFYRAPELMLGATEY 219 (383)
T ss_dssp HHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS----------------CCCCCCCCSSCCCHHHHTTCSSC
T ss_pred HHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC----------------CCcCcccCCCccCHHHhcCCCCC
Confidence 99999999999999999998 57899999999998643211 12345789999999999876669
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC-----------------CCC---------ccccCCHHHH
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-----------------LPP---------SWVAKFSEQE 663 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~-----------------~p~---------~~~~~~~~l~ 663 (1196)
+.++|||||||++|||++ ||......+....++...+. +|. .....++++.
T Consensus 220 ~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (383)
T 3eb0_A 220 TPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAI 299 (383)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHH
T ss_pred CcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHH
Confidence 999999999999999996 88766555444433321111 110 1123567899
Q ss_pred HHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 664 SLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 664 ~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
+||++||+.||.+|||+.++++||||....
T Consensus 300 ~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (383)
T 3eb0_A 300 DLLEQILRYEPDLRINPYEAMAHPFFDHLR 329 (383)
T ss_dssp HHHHHHCCSSGGGSCCHHHHHTSGGGHHHH
T ss_pred HHHHHHccCChhhCCCHHHHhcCHHHHHHH
Confidence 999999999999999999999999997653
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=397.17 Aligned_cols=260 Identities=28% Similarity=0.416 Sum_probs=214.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
..++|++.+.||+|+||+||+|+++.+|+.||||++..... .......+.+|+.+|+.++||||++++++|.
T Consensus 183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~------- 255 (543)
T 3c4z_A 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFE------- 255 (543)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEE-------
T ss_pred ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEe-------
Confidence 35789999999999999999999999999999999975321 1123457889999999999999999998873
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----CCCCHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----DHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----~~l~e~~~~~i~~qIa~gL 532 (1196)
....+|+|||||+ |+|.+++... ..+++..++.++.||+.||
T Consensus 256 ---------------------------------~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL 302 (543)
T 3c4z_A 256 ---------------------------------TKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302 (543)
T ss_dssp ---------------------------------CSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHH
T ss_pred ---------------------------------eCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHH
Confidence 2456899999997 5999998753 3699999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||++||+||||||+|||++.++++||+|||+++.+.... ......+||+.|+|||++.+ ..|
T Consensus 303 ~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~---------------~~~~~~~GT~~Y~APE~l~~-~~~ 366 (543)
T 3c4z_A 303 EHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ---------------TKTKGYAGTPGFMAPELLLG-EEY 366 (543)
T ss_dssp HHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC---------------CCBCCCCSCTTTSCHHHHTT-CCB
T ss_pred HHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCC---------------cccccccCCccccChhhhcC-CCC
Confidence 99999999999999999999999999999999998643211 11234589999999999988 579
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhH----HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----H
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----A 680 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~----~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a 680 (1196)
+.++|||||||++|||++ ||.... ..+....+......+| ...++.+.+||++||+.||.+||+ +
T Consensus 367 ~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p---~~~s~~~~~li~~lL~~dP~~R~~~~~~~a 443 (543)
T 3c4z_A 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP---DKFSPASKDFCEALLQKDPEKRLGFRDGSC 443 (543)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHSCSSGGGSCCCBTTBS
T ss_pred ChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCC---cccCHHHHHHHHHhccCCHhHCCCCcccCH
Confidence 999999999999999996 886542 2333333333333333 345779999999999999999996 5
Q ss_pred HHHHhccCCCCchHHHH
Q 000993 681 TELLQDALPPQMEYELL 697 (1196)
Q Consensus 681 ~eiL~~~~~~~~~~~~~ 697 (1196)
+++++||||..+.+..+
T Consensus 444 ~ei~~Hpff~~i~w~~l 460 (543)
T 3c4z_A 444 DGLRTHPLFRDISWRQL 460 (543)
T ss_dssp HHHHTSGGGTTCCHHHH
T ss_pred HHHHcCccccCCCHHHH
Confidence 89999999999987644
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-39 Score=371.64 Aligned_cols=273 Identities=25% Similarity=0.372 Sum_probs=211.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|.+.+.||+|+||.||+|++..+|+.||||++... ........+.+|+.+++.++||||+++++++....
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 82 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF-DKPLFALRTLREIKILKHFKHENIITIFNIQRPDS----- 82 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSC-----
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc-ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccc-----
Confidence 357999999999999999999999999999999998633 33345567889999999999999999998863210
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
......+|+||||++++|.+++.. ..+++..++.++.||+.||+|||++
T Consensus 83 ------------------------------~~~~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~ 131 (353)
T 2b9h_A 83 ------------------------------FENFNEVYIIQELMQTDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGS 131 (353)
T ss_dssp ------------------------------STTCCCEEEEECCCSEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ------------------------------cCccceEEEEEeccCccHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 012356899999999999998876 5799999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++............ ..........+||+.|+|||++.+...++.++||
T Consensus 132 ~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~-----~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di 206 (353)
T 2b9h_A 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP-----TGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDV 206 (353)
T ss_dssp TEECSCCCGGGEEECTTCCEEECCCTTCEECC---------------------CCCCCCGGGCCHHHHHSCCCCCHHHHH
T ss_pred CeecCCCCHHHeEEcCCCcEEEEecccccccccccccccCc-----cccccchhhccccccccCCeeeccCCCccchhhH
Confidence 99999999999999999999999999998754322110000 0001112345899999999998765678999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC------------------------CC-----CccccCCHHHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE------------------------LP-----PSWVAKFSEQESLL 666 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~------------------------~p-----~~~~~~~~~l~~LI 666 (1196)
|||||++|||++ ||................+. .+ ..+...++++.+||
T Consensus 207 ~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 286 (353)
T 2b9h_A 207 WSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLL 286 (353)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHH
Confidence 999999999996 77665544333222111000 00 01235677899999
Q ss_pred HHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 667 RRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 667 ~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
++||+.||.+|||+.++++|+||....
T Consensus 287 ~~~L~~dP~~Rpt~~ell~hp~~~~~~ 313 (353)
T 2b9h_A 287 QRMLVFDPAKRITAKEALEHPYLQTYH 313 (353)
T ss_dssp HHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred HHhcCcCcccCCCHHHHhcCccccccC
Confidence 999999999999999999999998754
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-39 Score=378.58 Aligned_cols=255 Identities=25% Similarity=0.379 Sum_probs=206.6
Q ss_pred CCceE--EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 381 NDFEE--LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 381 ~~y~~--~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+.|.+ .+.||+|+||.||+|++..+|+.||+|+++... ....+.+.+|+.+|+.++||||++++++|.+
T Consensus 87 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~------- 157 (373)
T 2x4f_A 87 SFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG--MKDKEEVKNEISVMNQLDHANLIQLYDAFES------- 157 (373)
T ss_dssp GTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------
T ss_pred cceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc--cccHHHHHHHHHHHHhCCCCCCCeEEEEEEE-------
Confidence 33444 678999999999999999999999999997532 2445679999999999999999999998732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+|||||+ ++|.+++... ..+++..++.++.||+.||+|||
T Consensus 158 ---------------------------------~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH 204 (373)
T 2x4f_A 158 ---------------------------------KNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH 204 (373)
T ss_dssp ---------------------------------SSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 356899999997 5898888654 46999999999999999999999
Q ss_pred hCCCcccCCCcCcEEe--cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 537 GQGIIHRDLTPNNIFF--DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 537 s~gIiHrDLKp~NILl--d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
++||+||||||+|||+ +.++.+||+|||+++...... .....+||+.|+|||++.+ ..++.
T Consensus 205 ~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~~~~~ 267 (373)
T 2x4f_A 205 QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE----------------KLKVNFGTPEFLAPEVVNY-DFVSF 267 (373)
T ss_dssp HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC----------------BCCCCCSSCTTCCHHHHTT-CBCCH
T ss_pred HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc----------------ccccccCCCcEeChhhccC-CCCCc
Confidence 9999999999999999 556789999999998653211 1234579999999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
++|||||||++|||++ ||......+....+.......+. .+...++++.+||.+||+.||.+|||+.++++||||.
T Consensus 268 ~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~ 347 (373)
T 2x4f_A 268 PTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLS 347 (373)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred HHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcC
Confidence 9999999999999996 88776666555555544444433 4456788999999999999999999999999999998
Q ss_pred CchH
Q 000993 691 QMEY 694 (1196)
Q Consensus 691 ~~~~ 694 (1196)
....
T Consensus 348 ~~~~ 351 (373)
T 2x4f_A 348 DHKL 351 (373)
T ss_dssp CHHH
T ss_pred CCch
Confidence 7643
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-39 Score=374.35 Aligned_cols=257 Identities=23% Similarity=0.450 Sum_probs=213.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC--c----hhHHHHHHHHHHHHhc-CCCCeeeeeeeeee
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS--L----PVNDRILREVATLSRL-QHQHVVRYYQAWFE 451 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~--~----~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e 451 (1196)
+.++|++.+.||+|+||.||+|+++.+|+.||||+++..... . ...+.+.+|+.+++.+ +||||++++++|..
T Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 171 (365)
T 2y7j_A 92 FYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYES 171 (365)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEB
T ss_pred hhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEee
Confidence 456899999999999999999999999999999999765422 1 1245678999999999 89999999988732
Q ss_pred cCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHH
Q 000993 452 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVE 530 (1196)
Q Consensus 452 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~ 530 (1196)
....|+|||||+| +|.+++.....+++..++.++.||+.
T Consensus 172 ----------------------------------------~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~ 211 (365)
T 2y7j_A 172 ----------------------------------------SSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLE 211 (365)
T ss_dssp ----------------------------------------SSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred ----------------------------------------CCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 3568999999975 99999988888999999999999999
Q ss_pred HHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC-
Q 000993 531 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW- 609 (1196)
Q Consensus 531 gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~- 609 (1196)
||.|||++||+||||||+|||++.++.+||+|||++..+.... .....+||+.|+|||++.+.
T Consensus 212 ~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~ 275 (365)
T 2y7j_A 212 AVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE----------------KLRELCGTPGYLAPEILKCSM 275 (365)
T ss_dssp HHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC----------------CBCCCCSCGGGCCHHHHHHTT
T ss_pred HHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCCCc----------------ccccCCCCCCccChhhccccc
Confidence 9999999999999999999999999999999999997653211 12345799999999998642
Q ss_pred ----CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCCHH
Q 000993 610 ----PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSAT 681 (1196)
Q Consensus 610 ----~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~ 681 (1196)
..++.++|||||||++|||++ ||...................+ +.+...++.+.+||++||+.||.+|||+.
T Consensus 276 ~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ 355 (365)
T 2y7j_A 276 DETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAE 355 (365)
T ss_dssp CTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred cccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHH
Confidence 358899999999999999997 8876555444433333333322 34556788999999999999999999999
Q ss_pred HHHhccCCCC
Q 000993 682 ELLQDALPPQ 691 (1196)
Q Consensus 682 eiL~~~~~~~ 691 (1196)
++++||||++
T Consensus 356 ell~hp~f~r 365 (365)
T 2y7j_A 356 QALQHPFFER 365 (365)
T ss_dssp HHHHSGGGCC
T ss_pred HHhcCcccCC
Confidence 9999999863
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-39 Score=366.43 Aligned_cols=256 Identities=23% Similarity=0.398 Sum_probs=210.7
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
....++|.+.+.||+|+||.||+|+++.+|+.||+|+++.... .....+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 77 (304)
T 2jam_A 5 TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA--FRDSSLENEIAVLKKIKHENIVTLEDIYES----- 77 (304)
T ss_dssp -CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred cchhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc--cchHHHHHHHHHHHhCCCCCeeehhhhccc-----
Confidence 3345789999999999999999999999999999999975332 234568899999999999999999988732
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|+|||||+ ++|.+++...+.+++..++.++.||+.||+||
T Consensus 78 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~l 122 (304)
T 2jam_A 78 -----------------------------------TTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYL 122 (304)
T ss_dssp -----------------------------------SSEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 356899999996 59999998888999999999999999999999
Q ss_pred HhCCCcccCCCcCcEEe---cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 536 HGQGIIHRDLTPNNIFF---DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILl---d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
|++||+||||||+||++ +.++.+||+|||+++..... ......||+.|+|||++.+ ..+
T Consensus 123 H~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~-~~~ 184 (304)
T 2jam_A 123 HENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-----------------IMSTACGTPGYVAPEVLAQ-KPY 184 (304)
T ss_dssp HHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-----------------TTHHHHSCCCBCCTTTBSS-CSC
T ss_pred HHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-----------------ccccccCCCCccChHHhcc-CCC
Confidence 99999999999999999 77889999999998743211 1233579999999999987 568
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
+.++|||||||++|+|++ ||...................+ +.+...++++.+||.+||+.||.+|||+.++++|+|
T Consensus 185 ~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~ 264 (304)
T 2jam_A 185 SKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPW 264 (304)
T ss_dssp CHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHH
T ss_pred CchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcc
Confidence 999999999999999996 7776655544444433333332 234566789999999999999999999999999998
Q ss_pred CCCc
Q 000993 689 PPQM 692 (1196)
Q Consensus 689 ~~~~ 692 (1196)
+...
T Consensus 265 ~~~~ 268 (304)
T 2jam_A 265 IDGN 268 (304)
T ss_dssp HHSS
T ss_pred ccCC
Confidence 8653
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-39 Score=362.69 Aligned_cols=258 Identities=26% Similarity=0.400 Sum_probs=208.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++++.||+|+||.||+|++..+|+.||+|++.... ......+.+|+.+++.++||||+++++++..
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 87 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYIVEIEILATCDHPYIVKLLGAYYH-------- 87 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC--HHHHHHHHHHHHHHhcCCCCCEeeeeeeeee--------
Confidence 478999999999999999999999999999999986543 2345678999999999999999999998743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+|||||++ +|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 88 --------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~ 135 (302)
T 2j7t_A 88 --------------------------------DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 135 (302)
T ss_dssp --------------------------------C-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhc
Confidence 3457999999975 88888765 4669999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc----CCCCCC
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ----GWPKID 613 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~----~~~~~s 613 (1196)
+|++||||||+|||++.++.+||+|||++....... .......||+.|+|||++. ....++
T Consensus 136 ~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~ 200 (302)
T 2j7t_A 136 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL---------------QKRDSFIGTPYWMAPEVVMCETMKDTPYD 200 (302)
T ss_dssp TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH---------------HC-----CCGGGCCHHHHHHHHTTSTTTT
T ss_pred CCcccCCCCHHHEEECCCCCEEEEECCCCccccccc---------------cccccccCChhhcCCeeeccccCCCCCCc
Confidence 999999999999999999999999999987542211 0113357999999999984 225689
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
.++|||||||++|+|++ ||..........................+..+.+||.+||+.||.+|||+.++++|+|+.
T Consensus 201 ~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~ 280 (302)
T 2j7t_A 201 YKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVS 280 (302)
T ss_dssp THHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTT
T ss_pred hhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHh
Confidence 99999999999999996 777665555444444333222233445677899999999999999999999999999998
Q ss_pred CchH
Q 000993 691 QMEY 694 (1196)
Q Consensus 691 ~~~~ 694 (1196)
....
T Consensus 281 ~~~~ 284 (302)
T 2j7t_A 281 SITS 284 (302)
T ss_dssp TCCC
T ss_pred hhcc
Confidence 8653
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-39 Score=388.97 Aligned_cols=259 Identities=23% Similarity=0.356 Sum_probs=202.0
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC------chhHHHHHHHHHHHHhcCCCCeeeeeeeeeec
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS------LPVNDRILREVATLSRLQHQHVVRYYQAWFET 452 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~------~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~ 452 (1196)
..++|.+.+.||+|+||+||+|.++.+++.||||++...... ......+.+|+.+|+.++||||++++++|.
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-- 210 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-- 210 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE--
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe--
Confidence 457899999999999999999999999999999999754311 112235789999999999999999998762
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~g 531 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.|
T Consensus 211 ---------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~ 251 (419)
T 3i6u_A 211 ---------------------------------------AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 251 (419)
T ss_dssp ---------------------------------------SSEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHH
T ss_pred ---------------------------------------cCceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHH
Confidence 234689999996 5999999888899999999999999999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCCC---CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~~---~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
|+|||++||+||||||+|||++.++ .+||+|||+|+...... .....+||+.|+|||++.+
T Consensus 252 l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~ 315 (419)
T 3i6u_A 252 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----------------LMRTLCGTPTYLAPEVLVS 315 (419)
T ss_dssp HHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC---------------------------CTTCCTTTTC-
T ss_pred HHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCCCc----------------cccccCCCCCccCceeeec
Confidence 9999999999999999999997654 59999999998653211 1234689999999999863
Q ss_pred --CCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhh-hcCCC-CCccccCCHHHHHHHHHcccCCCCCCCCHH
Q 000993 609 --WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLK-QKGEL-PPSWVAKFSEQESLLRRLMSPSPSDRPSAT 681 (1196)
Q Consensus 609 --~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~-~~~~~-p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ 681 (1196)
...|+.++|||||||++|+|++ ||............+. ..... +..+...++.+.+||++||+.||.+|||+.
T Consensus 316 ~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ 395 (419)
T 3i6u_A 316 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE 395 (419)
T ss_dssp ---CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred CCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHH
Confidence 2457889999999999999997 7764432222222222 12222 334556788999999999999999999999
Q ss_pred HHHhccCCCCchH
Q 000993 682 ELLQDALPPQMEY 694 (1196)
Q Consensus 682 eiL~~~~~~~~~~ 694 (1196)
++|+||||.....
T Consensus 396 e~l~hp~~~~~~~ 408 (419)
T 3i6u_A 396 EALRHPWLQDEDM 408 (419)
T ss_dssp HHHHSGGGCCHHH
T ss_pred HHhCCcccCChhH
Confidence 9999999987543
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-39 Score=363.41 Aligned_cols=254 Identities=28% Similarity=0.424 Sum_probs=203.7
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
...++|++.+.||+|+||.||+|++..+++.||+|++..... .......+.+|+.+++.++||||+++++++.
T Consensus 8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~------ 81 (294)
T 4eqm_A 8 IINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDE------ 81 (294)
T ss_dssp CEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEE------
T ss_pred HhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeee------
Confidence 345789999999999999999999999999999999875443 3345578999999999999999999998873
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
....+|+|||||+| +|.+++....++++..++.++.||+.||+||
T Consensus 82 ----------------------------------~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~l 127 (294)
T 4eqm_A 82 ----------------------------------EDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHA 127 (294)
T ss_dssp ----------------------------------CSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------eCCeEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 24578999999975 9999999888999999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+|||++.++++||+|||+++....... ......+||+.|+|||++.+ ..++.+
T Consensus 128 H~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~-~~~~~~ 192 (294)
T 4eqm_A 128 HDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL--------------TQTNHVLGTVQYFSPEQAKG-EATDEC 192 (294)
T ss_dssp HHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC---------------------------CCSSCCHHHHHT-CCCCTT
T ss_pred HHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccc--------------cccCccccCccccCHhHhcC-CCCCch
Confidence 999999999999999999999999999999986532210 11234579999999999988 568999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC--CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP--PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p--~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||||||++|||++ ||.................... ......++.+.++|.+||+.||.+||+..+.+.+
T Consensus 193 ~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~ 268 (294)
T 4eqm_A 193 TDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKD 268 (294)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHH
T ss_pred HhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHH
Confidence 999999999999996 8877666555544443222111 1123466789999999999999999954444443
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=372.27 Aligned_cols=273 Identities=25% Similarity=0.406 Sum_probs=217.8
Q ss_pred CCCCCCCCCCC-CcccCCceEE-eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCe
Q 000993 366 DSGSPNMSLPS-SRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHV 442 (1196)
Q Consensus 366 ~~~~~~~~~~~-~~~~~~y~~~-~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnI 442 (1196)
+...+...... ..+.+.|.+. +.||+|+||.||+|+++.+|+.||||++............+.+|+.+++.+ +||||
T Consensus 12 ~~~~~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i 91 (327)
T 3lm5_A 12 DLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRV 91 (327)
T ss_dssp ----CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTB
T ss_pred cccchhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCE
Confidence 33344433333 3344567776 889999999999999999999999999986555555567899999999999 56999
Q ss_pred eeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc--CCCCHH
Q 000993 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--DHFDKE 519 (1196)
Q Consensus 443 V~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~--~~l~e~ 519 (1196)
++++++|.. ...+|+|||||.+ +|.+++... ..+++.
T Consensus 92 v~~~~~~~~----------------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 131 (327)
T 3lm5_A 92 INLHEVYEN----------------------------------------TSEIILILEYAAGGEIFSLCLPELAEMVSEN 131 (327)
T ss_dssp CCEEEEEEC----------------------------------------SSEEEEEEECCTTEEGGGGGSSCC-CCCCHH
T ss_pred EEEEEEEEe----------------------------------------CCeEEEEEEecCCCcHHHHHHHhcccCCCHH
Confidence 999988732 4568999999975 899888543 679999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecC---CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccc
Q 000993 520 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 596 (1196)
Q Consensus 520 ~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 596 (1196)
.++.++.||+.||+|||++||+||||||+|||++. ++.+||+|||+++...... ......|
T Consensus 132 ~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~----------------~~~~~~g 195 (327)
T 3lm5_A 132 DVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC----------------ELREIMG 195 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-------------------------CC
T ss_pred HHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc----------------ccccccC
Confidence 99999999999999999999999999999999988 7899999999998653211 1234579
Q ss_pred cccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccC
Q 000993 597 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSP 672 (1196)
Q Consensus 597 T~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~ 672 (1196)
|+.|+|||++.+ ..++.++|||||||++|+|++ ||...................+ +.+...++.+.+||.+||+.
T Consensus 196 t~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 274 (327)
T 3lm5_A 196 TPEYLAPEILNY-DPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVK 274 (327)
T ss_dssp CGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCS
T ss_pred CcCccCCeeecC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCC
Confidence 999999999987 568999999999999999996 8877666555554444333333 34456778999999999999
Q ss_pred CCCCCCCHHHHHhccCCCCchHH
Q 000993 673 SPSDRPSATELLQDALPPQMEYE 695 (1196)
Q Consensus 673 dP~~RPta~eiL~~~~~~~~~~~ 695 (1196)
||.+|||++++|+|+|+++..++
T Consensus 275 dP~~Rpt~~~ll~h~~~~~~~~~ 297 (327)
T 3lm5_A 275 NPEKRPTAEICLSHSWLQQWDFE 297 (327)
T ss_dssp SGGGSCCHHHHTTCGGGCCCCTT
T ss_pred ChhhCcCHHHHhCCHhhcccccc
Confidence 99999999999999999987654
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=363.93 Aligned_cols=256 Identities=29% Similarity=0.476 Sum_probs=186.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.+++|++.+.||+|+||.||+|++..+|+.||||++..... .......+.+|+.+++.++||||+++++++.+
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 82 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFED------ 82 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEEC------
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEcc------
Confidence 45789999999999999999999999999999999964321 11224678899999999999999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|+|||||+ ++|.+++... ..+++..++.++.||+.||+||
T Consensus 83 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l 128 (278)
T 3cok_A 83 ----------------------------------SNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYL 128 (278)
T ss_dssp ----------------------------------SSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 356899999996 4999998765 5799999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+||+++.++.+||+|||++....... .......||+.|+|||++.+ ..++.+
T Consensus 129 H~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~ 192 (278)
T 3cok_A 129 HSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH---------------EKHYTLCGTPNYISPEIATR-SAHGLE 192 (278)
T ss_dssp HHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC--------------------------------------------C
T ss_pred HHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC---------------CcceeccCCCCcCCcchhcC-CCCCch
Confidence 99999999999999999999999999999997643211 01123578999999999987 568999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
+||||||+++|||++ ||...................| ...++++.+||.+||+.||.+|||+.++++|+||.+.
T Consensus 193 ~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 269 (278)
T 3cok_A 193 SDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMP---SFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRN 269 (278)
T ss_dssp THHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCCCC---TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC--
T ss_pred hhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccCCc---cccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCC
Confidence 999999999999996 7765433322222222121222 2356789999999999999999999999999999865
Q ss_pred h
Q 000993 693 E 693 (1196)
Q Consensus 693 ~ 693 (1196)
.
T Consensus 270 ~ 270 (278)
T 3cok_A 270 S 270 (278)
T ss_dssp -
T ss_pred C
Confidence 3
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-39 Score=382.67 Aligned_cols=256 Identities=27% Similarity=0.384 Sum_probs=200.8
Q ss_pred CCcccCCceEE-eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHH-hcCCCCeeeeeeeeeecC
Q 000993 376 SSRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS-RLQHQHVVRYYQAWFETG 453 (1196)
Q Consensus 376 ~~~~~~~y~~~-~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~-~L~HpnIV~l~~~~~e~~ 453 (1196)
....+++|.+. +.||+|+||+||+|.++.+|+.||||+++. ...+.+|+.++. ..+||||++++++|...
T Consensus 56 ~~~~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~- 127 (400)
T 1nxk_A 56 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENL- 127 (400)
T ss_dssp CSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEE-
T ss_pred CCcccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-------chhHHHHHHHHHHhcCCCCcceEeEEEeec-
Confidence 34567889987 689999999999999999999999999862 135678888874 45899999999987321
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcC--CCCHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD--HFDKELAWHLFRQIVE 530 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~--~l~e~~~~~i~~qIa~ 530 (1196)
.....++|+|||||+| +|.+++.... .+++.+++.++.||+.
T Consensus 128 -----------------------------------~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~ 172 (400)
T 1nxk_A 128 -----------------------------------YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 172 (400)
T ss_dssp -----------------------------------ETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHH
T ss_pred -----------------------------------ccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 0124678999999974 9999998653 5999999999999999
Q ss_pred HHHHHHhCCCcccCCCcCcEEecC---CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 531 GLAHIHGQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 531 gL~yLHs~gIiHrDLKp~NILld~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
||+|||++||+||||||+|||++. ++.+||+|||+++...... .....+||+.|+|||++.
T Consensus 173 aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~ 236 (400)
T 1nxk_A 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN----------------SLTTPCYTPYYVAPEVLG 236 (400)
T ss_dssp HHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC---------------------------CTTCCGGGSC
T ss_pred HHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCCC----------------ccccCCCCCCccCHhhcC
Confidence 999999999999999999999998 7889999999997542111 124568999999999998
Q ss_pred CCCCCCCcchhHHHHHHHHHhhc---CCchhHHHH----HHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCC
Q 000993 608 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQ----IVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPS 679 (1196)
Q Consensus 608 ~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~----~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPt 679 (1196)
+ ..|+.++|||||||++|||++ ||....... ...........++ +.+...++++.+||++||+.||.+|||
T Consensus 237 ~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt 315 (400)
T 1nxk_A 237 P-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMT 315 (400)
T ss_dssp C-CCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred C-CCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcC
Confidence 7 579999999999999999996 776443211 1112222222333 345667889999999999999999999
Q ss_pred HHHHHhccCCCC
Q 000993 680 ATELLQDALPPQ 691 (1196)
Q Consensus 680 a~eiL~~~~~~~ 691 (1196)
+.++++|+|+.+
T Consensus 316 ~~eil~hp~~~~ 327 (400)
T 1nxk_A 316 ITEFMNHPWIMQ 327 (400)
T ss_dssp HHHHHHSHHHHT
T ss_pred HHHHhcCccccC
Confidence 999999999864
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-39 Score=381.04 Aligned_cols=258 Identities=26% Similarity=0.384 Sum_probs=205.0
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
...+|++.+.||+|+||+||+|++..+++ ||+|++...... ..+|+.+|+.++||||++++++|...+.
T Consensus 38 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~------~~~E~~il~~l~h~niv~l~~~~~~~~~---- 106 (394)
T 4e7w_A 38 REIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF------KNRELQIMRIVKHPNVVDLKAFFYSNGD---- 106 (394)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS------CCHHHHHHHTCCCTTBCCEEEEEEEESS----
T ss_pred ccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch------HHHHHHHHHhCCCCCcceEEEEEEecCC----
Confidence 34689999999999999999999986665 888887543221 2369999999999999999999865321
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHh----hcCCCCHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE----SYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~----~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
.....++|+|||||++++...+. ....+++..++.++.||+.||+|
T Consensus 107 ------------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~ 156 (394)
T 4e7w_A 107 ------------------------------KKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAY 156 (394)
T ss_dssp ------------------------------SSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------CCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 12346789999999987766554 35679999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEec-CCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFD-ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld-~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
||++||+||||||+|||++ .++.+||+|||+|+...... .....+||+.|+|||++.+...|+
T Consensus 157 LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~----------------~~~~~~~t~~y~aPE~~~~~~~~~ 220 (394)
T 4e7w_A 157 IHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE----------------PNVSYICSRYYRAPELIFGATNYT 220 (394)
T ss_dssp HHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC----------------CCCSSCSCGGGCCHHHHTTCSSCC
T ss_pred HHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC----------------CCcccccCcCccCHHHHcCCCCCC
Confidence 9999999999999999999 78999999999998653211 123467899999999998766799
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcC-----------------CCCC----c-----cccCCHHHHH
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG-----------------ELPP----S-----WVAKFSEQES 664 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~-----------------~~p~----~-----~~~~~~~l~~ 664 (1196)
.++|||||||++|||++ ||...........+....+ .+|. . ....++++.+
T Consensus 221 ~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (394)
T 4e7w_A 221 TNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAID 300 (394)
T ss_dssp THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHH
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHH
Confidence 99999999999999996 8876655444333322111 1110 0 1125678999
Q ss_pred HHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 665 LLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 665 LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||.+||+.||.+|||+.++++||||....
T Consensus 301 li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (394)
T 4e7w_A 301 LISRLLEYTPSARLTAIEALCHPFFDELR 329 (394)
T ss_dssp HHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred HHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence 99999999999999999999999998764
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-39 Score=362.91 Aligned_cols=252 Identities=24% Similarity=0.469 Sum_probs=211.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.+++|++.+.||+|+||.||+|++..+++.||||++..... .......+.+|+.+++.++||||+++++++.+
T Consensus 12 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 85 (284)
T 2vgo_A 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD------ 85 (284)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred hhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc------
Confidence 45899999999999999999999999999999999864321 11234678899999999999999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+||||+++ +|.+++.....+++..++.++.||+.||+|||
T Consensus 86 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH 131 (284)
T 2vgo_A 86 ----------------------------------RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH 131 (284)
T ss_dssp ----------------------------------SSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3568999999975 99999998889999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+||+++.++.+||+|||++...... ......||+.|+|||++.+ ..++.++
T Consensus 132 ~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~ 193 (284)
T 2vgo_A 132 ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-----------------RRRTMCGTLDYLPPEMIEG-KTHDEKV 193 (284)
T ss_dssp TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS-----------------CBCCCCSCGGGCCHHHHTT-CCBCTTH
T ss_pred HCCceecCCCHHHEEEcCCCCEEEecccccccCccc-----------------ccccccCCCCcCCHHHhcc-CCCCccc
Confidence 999999999999999999999999999998653211 1234579999999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
||||||+++|+|++ ||..................+|+ ..++.+.++|.+||+.||.+|||+.++++|+||..
T Consensus 194 Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~ 268 (284)
T 2vgo_A 194 DLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP---FLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKA 268 (284)
T ss_dssp HHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCT---TSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHH
T ss_pred chhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCCC---cCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHh
Confidence 99999999999996 78766555544444433333333 35678999999999999999999999999998753
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-39 Score=360.82 Aligned_cols=257 Identities=29% Similarity=0.531 Sum_probs=212.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|+++.+|+.||+|++..........+.+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 77 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR------- 77 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEG-------
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecC-------
Confidence 5799999999999999999999999999999999987666666677899999999999999999999987532
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc----CCCCHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY----DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~----~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+|+|||||++ +|.+++... ..+++..++.++.||+.||+|
T Consensus 78 -------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~ 126 (279)
T 2w5a_A 78 -------------------------------TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126 (279)
T ss_dssp -------------------------------GGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------CCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHH
Confidence 24578999999975 999998653 349999999999999999999
Q ss_pred HHhCC-----CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 535 IHGQG-----IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 535 LHs~g-----IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
||++| |+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+
T Consensus 127 lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~- 190 (279)
T 2w5a_A 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT---------------SFAKTFVGTPYYMSPEQMNR- 190 (279)
T ss_dssp HHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---C---------------HHHHHHHSCCTTCCHHHHHC-
T ss_pred HhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecccc---------------ccccccCCCccccChHHhcc-
Confidence 99999 9999999999999999999999999998653211 00123478999999999987
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
..++.++||||||+++|+|++ ||.............. ...+......++++.++|.+||+.||.+|||+.++++|
T Consensus 191 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 268 (279)
T 2w5a_A 191 MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE--GKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN 268 (279)
T ss_dssp C-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhh--cccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 568999999999999999996 7776555444333322 23333334567899999999999999999999999999
Q ss_pred cCCCCc
Q 000993 687 ALPPQM 692 (1196)
Q Consensus 687 ~~~~~~ 692 (1196)
+|+..-
T Consensus 269 ~~~~~~ 274 (279)
T 2w5a_A 269 PLILEH 274 (279)
T ss_dssp TTCCGG
T ss_pred hhhhhh
Confidence 988753
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-39 Score=366.34 Aligned_cols=278 Identities=26% Similarity=0.378 Sum_probs=208.7
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.....++|++.+.||+|+||.||+|.+..+|+.||||++... .....+.+.+|+.+++.++||||+++++++...+..
T Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 83 (320)
T 2i6l_A 6 GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQ 83 (320)
T ss_dssp CEEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCB
T ss_pred cCccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC--ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccc
Confidence 344568999999999999999999999999999999998743 334567889999999999999999999987432110
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
. ............+|+||||++++|.+++.. +++++..++.++.||+.||+||
T Consensus 84 ~--------------------------~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~l 136 (320)
T 2i6l_A 84 L--------------------------TDDVGSLTELNSVYIVQEYMETDLANVLEQ-GPLLEEHARLFMYQLLRGLKYI 136 (320)
T ss_dssp C--------------------------CC----CCSCSEEEEEEECCSEEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHH
T ss_pred c--------------------------ccccccccccCceeEEeeccCCCHHHHhhc-CCccHHHHHHHHHHHHHHHHHH
Confidence 0 000011123567899999999999998864 5699999999999999999999
Q ss_pred HhCCCcccCCCcCcEEec-CCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 536 HGQGIIHRDLTPNNIFFD-ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld-~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
|++||+||||||+|||++ .++.+||+|||+++........ ........+|+.|+|||++.+...++.
T Consensus 137 H~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~~~~~~~ 204 (320)
T 2i6l_A 137 HSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSH------------KGHLSEGLVTKWYRSPRLLLSPNNYTK 204 (320)
T ss_dssp HHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------------------CCCGGGSCCTTCCHHHHHCTTCCCH
T ss_pred HhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCccc------------ccccccccccccccCcHHhcCcccCCc
Confidence 999999999999999997 5679999999999865321100 011234568999999999876567899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC----------------------C-----CccccCCHHHHH
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL----------------------P-----PSWVAKFSEQES 664 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~----------------------p-----~~~~~~~~~l~~ 664 (1196)
++|||||||++|||++ ||......+............ + ..+...++++.+
T Consensus 205 ~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (320)
T 2i6l_A 205 AIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVD 284 (320)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHH
T ss_pred hhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHH
Confidence 9999999999999996 787655444333222211100 0 012346778999
Q ss_pred HHHHcccCCCCCCCCHHHHHhccCCCCchH
Q 000993 665 LLRRLMSPSPSDRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 665 LI~~cL~~dP~~RPta~eiL~~~~~~~~~~ 694 (1196)
||++||+.||.+|||+.++++|+||.....
T Consensus 285 li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 314 (320)
T 2i6l_A 285 FLEQILTFSPMDRLTAEEALSHPYMSIYSF 314 (320)
T ss_dssp HHHTTSCSSGGGSCCHHHHHTSHHHHTTCC
T ss_pred HHHHHcCCCccccCCHHHHhCCcccccccC
Confidence 999999999999999999999999876543
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-39 Score=376.05 Aligned_cols=256 Identities=24% Similarity=0.386 Sum_probs=209.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|++..+|+.||+|++... ........+.+|+.+++.++||||++++++|..
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 102 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-------- 102 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECC-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE--------
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccc-cCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE--------
Confidence 47899999999999999999999999999999999754 344556789999999999999999999998743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+|||||++ +|.+++.....+++..++.++.||+.||+|||+.
T Consensus 103 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~ 150 (360)
T 3eqc_A 103 --------------------------------DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 150 (360)
T ss_dssp --------------------------------TTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCEEEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 3568999999975 9999999888999999999999999999999996
Q ss_pred -CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 539 -GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 539 -gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
||+||||||+|||++.++++||+|||+++...... .....||+.|+|||++.+ ..++.++|
T Consensus 151 ~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-----------------~~~~~gt~~y~aPE~~~~-~~~~~~~D 212 (360)
T 3eqc_A 151 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----------------ANSFVGTRSYMSPERLQG-THYSVQSD 212 (360)
T ss_dssp HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC---------------------CCCCTTCCHHHHTT-CCCSHHHH
T ss_pred CCEEcCCccHHHEEECCCCCEEEEECCCCccccccc-----------------ccCCCCCCCeECHHHHcC-CCCCchhh
Confidence 99999999999999999999999999997653221 234579999999999988 57899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHH-----------------------------------------HhhhcCCCCC
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLS-----------------------------------------DLKQKGELPP 653 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~-----------------------------------------~l~~~~~~p~ 653 (1196)
||||||++|+|++ ||........... ..........
T Consensus 213 i~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (360)
T 3eqc_A 213 IWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKL 292 (360)
T ss_dssp HHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCC
Confidence 9999999999996 7765433222110 0111111111
Q ss_pred ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchH
Q 000993 654 SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 654 ~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~ 694 (1196)
.....++++.+||++||+.||.+|||+.++|+|+||.+...
T Consensus 293 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 333 (360)
T 3eqc_A 293 PSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDA 333 (360)
T ss_dssp CTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHHH
T ss_pred CcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcchH
Confidence 12235678999999999999999999999999999876543
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-39 Score=360.35 Aligned_cols=255 Identities=25% Similarity=0.398 Sum_probs=203.6
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
..++|.+.+.||+|+||.||+|.++.+|+.||||++..... .......+.+|+.+++.++||||+++++++..
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 82 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST------ 82 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec------
Confidence 45899999999999999999999999999999999874321 12234578899999999999999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||
T Consensus 83 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH 128 (276)
T 2h6d_A 83 ----------------------------------PTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH 128 (276)
T ss_dssp ----------------------------------SSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 356899999996 599999998888999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+||+++.++.+||+|||++....... ......||+.|+|||++.+....+.++
T Consensus 129 ~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~ 192 (276)
T 2h6d_A 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE----------------FLRTSCGSPNYAAPEVISGRLYAGPEV 192 (276)
T ss_dssp HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-----------------------------CCTGGGTTSCCCHHHH
T ss_pred HCCCccCCCChhhEEECCCCCEEEeecccccccCCCc----------------ceecccCCccccCHHHHcCCCCCCccc
Confidence 9999999999999999999999999999997643211 112347899999999998844457899
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||||||+++|+|++ ||...................| ...++.+.++|.+||+.||.+|||+.++++|+||.+.
T Consensus 193 Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~ 268 (276)
T 2h6d_A 193 DIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP---EYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD 268 (276)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTT
T ss_pred hHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCc---hhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccC
Confidence 99999999999996 7776554444333332222222 2346789999999999999999999999999998653
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=364.72 Aligned_cols=264 Identities=25% Similarity=0.384 Sum_probs=209.6
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEc-cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc---CCCCeeeeeeeeeecC
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNK-LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL---QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~-~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L---~HpnIV~l~~~~~e~~ 453 (1196)
+..++|++.+.||+|+||.||+|++. .+|+.||||+++...........+.+|+.+++.+ +||||++++++|....
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 34578999999999999999999995 6789999999975443322223466777777766 8999999999874210
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC--CCCHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qIa~g 531 (1196)
......+|+||||++++|.+++.... .+++..++.++.||+.|
T Consensus 88 -----------------------------------~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~ 132 (326)
T 1blx_A 88 -----------------------------------TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 132 (326)
T ss_dssp -----------------------------------CSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHH
T ss_pred -----------------------------------cCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHH
Confidence 01346789999999999999997654 49999999999999999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
|+|||++||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.+ ..
T Consensus 133 l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~ 195 (326)
T 1blx_A 133 LDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM----------------ALTSVVVTLWYRAPEVLLQ-SS 195 (326)
T ss_dssp HHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGG----------------GGCCCCCCCTTCCHHHHTT-CC
T ss_pred HHHHHHCCceeccCCHHHeEEcCCCCEEEecCcccccccCCC----------------CccccccccceeCHHHHhc-CC
Confidence 999999999999999999999999999999999997643211 1234578999999999987 56
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC------------------------CCccccCCHHHHH
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL------------------------PPSWVAKFSEQES 664 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~------------------------p~~~~~~~~~l~~ 664 (1196)
++.++|||||||++|+|++ ||................+.. ...+...++.+.+
T Consensus 196 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (326)
T 1blx_A 196 YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKD 275 (326)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHH
T ss_pred CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHH
Confidence 8999999999999999996 787655544433333211100 0112345678899
Q ss_pred HHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 665 LLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 665 LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||.+||+.||.+|||+.++++|+||....
T Consensus 276 li~~~L~~dP~~Rpt~~e~l~hp~~~~~~ 304 (326)
T 1blx_A 276 LLLKCLTFNPAKRISAYSALSHPYFQDLE 304 (326)
T ss_dssp HHHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred HHHHHcCCCcccCCCHHHHhcCccccccc
Confidence 99999999999999999999999998764
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-39 Score=377.91 Aligned_cols=257 Identities=21% Similarity=0.314 Sum_probs=203.5
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC--------CCCeeeeeee
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ--------HQHVVRYYQA 448 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~--------HpnIV~l~~~ 448 (1196)
..+.++|++.+.||+|+||+||+|++..+++.||||+++. .......+.+|+.+|+.++ ||||++++++
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~ 109 (397)
T 1wak_A 33 DLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS---AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDD 109 (397)
T ss_dssp CEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEE
T ss_pred hhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEec---CCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecc
Confidence 3445789999999999999999999999999999999863 2344567889999999995 7889999998
Q ss_pred eeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc--CCCCHHHHHHHHH
Q 000993 449 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFR 526 (1196)
Q Consensus 449 ~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~ 526 (1196)
|...+ .....+|+|||||+++|.+.+... ..+++..++.++.
T Consensus 110 ~~~~~------------------------------------~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~ 153 (397)
T 1wak_A 110 FKISG------------------------------------VNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQ 153 (397)
T ss_dssp EEEEE------------------------------------TTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHH
T ss_pred eeecC------------------------------------CCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHH
Confidence 74321 134678999999999888877654 4699999999999
Q ss_pred HHHHHHHHHHhC-CCcccCCCcCcEEecCCC-------------------------------------------------
Q 000993 527 QIVEGLAHIHGQ-GIIHRDLTPNNIFFDARN------------------------------------------------- 556 (1196)
Q Consensus 527 qIa~gL~yLHs~-gIiHrDLKp~NILld~~~------------------------------------------------- 556 (1196)
||+.||+|||++ ||+||||||+|||++.++
T Consensus 154 qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (397)
T 1wak_A 154 QVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKL 233 (397)
T ss_dssp HHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGC
T ss_pred HHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCccccccccccccccccccc
Confidence 999999999998 999999999999999775
Q ss_pred CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCc
Q 000993 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFS 633 (1196)
Q Consensus 557 ~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~ 633 (1196)
.+||+|||+++..... ....+||+.|+|||++.+ ..++.++|||||||+||||++ ||.
T Consensus 234 ~~kl~DfG~a~~~~~~------------------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~ 294 (397)
T 1wak_A 234 KVKIADLGNACWVHKH------------------FTEDIQTRQYRSLEVLIG-SGYNTPADIWSTACMAFELATGDYLFE 294 (397)
T ss_dssp CEEECCGGGCEETTBC------------------SCSCCSCGGGCCHHHHHT-SCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred ceEecccccccccccc------------------CccCCCCCcccCChhhcC-CCCCcHHHHHHHHHHHHHHhhCCCCCC
Confidence 7999999999764311 234579999999999998 569999999999999999997 775
Q ss_pred hhH------HHHHHHHHhhhcCCCCCc---------------------------------------cccCCHHHHHHHHH
Q 000993 634 TAM------ERQIVLSDLKQKGELPPS---------------------------------------WVAKFSEQESLLRR 668 (1196)
Q Consensus 634 ~~~------~~~~~~~~l~~~~~~p~~---------------------------------------~~~~~~~l~~LI~~ 668 (1196)
... ............+..|.. ....++.+.+||.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 374 (397)
T 1wak_A 295 PHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLP 374 (397)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGG
T ss_pred CCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHH
Confidence 322 111111111111111110 01123467899999
Q ss_pred cccCCCCCCCCHHHHHhccCCCC
Q 000993 669 LMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
||+.||.+|||+.++|+||||.+
T Consensus 375 ~L~~dP~~Rpt~~e~l~hp~~~~ 397 (397)
T 1wak_A 375 MLELIPEKRATAAECLRHPWLNS 397 (397)
T ss_dssp GGCSSGGGSCCHHHHHTSGGGGC
T ss_pred HhccChhhcCCHHHHhhCccccC
Confidence 99999999999999999999863
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-39 Score=374.69 Aligned_cols=265 Identities=24% Similarity=0.364 Sum_probs=200.5
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
...+++|++.+.||+|+||.||+|+++.+|+.||||++...... .....+++..++.++||||++++++|...+.
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~-- 93 (360)
T 3e3p_A 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF---RNRELQIMQDLAVLHHPNIVQLQSYFYTLGE-- 93 (360)
T ss_dssp HHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC---CCHHHHHHHHHHHHCCTTBCCEEEEEEEECS--
T ss_pred hhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc---cHHHHHHHHHHHhcCCCCcccHHHhhhcccc--
Confidence 34578999999999999999999999999999999998643322 2356778888999999999999999865321
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHh----hcCCCCHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE----SYDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~----~~~~l~e~~~~~i~~qIa~gL 532 (1196)
......++|+|||||+++|.+.+. ....+++..++.++.||+.||
T Consensus 94 -------------------------------~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al 142 (360)
T 3e3p_A 94 -------------------------------RDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSI 142 (360)
T ss_dssp -------------------------------SCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHH
T ss_pred -------------------------------ccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHH
Confidence 012345689999999998776554 456799999999999999999
Q ss_pred HHHH--hCCCcccCCCcCcEEecC-CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 533 AHIH--GQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 533 ~yLH--s~gIiHrDLKp~NILld~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
.||| ++||+||||||+|||++. ++.+||+|||+++...... ......||+.|+|||++.+.
T Consensus 143 ~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~ 206 (360)
T 3e3p_A 143 GCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE----------------PNVAYICSRYYRAPELIFGN 206 (360)
T ss_dssp HHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTS----------------CCCSTTSCGGGCCHHHHTTC
T ss_pred HHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCC----------------CcccccCCcceeCHHHHcCC
Confidence 9999 999999999999999997 8999999999998653211 12345789999999999775
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-----------------------------Ccccc
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-----------------------------PSWVA 657 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-----------------------------~~~~~ 657 (1196)
..++.++|||||||++|||++ ||................+..+ .....
T Consensus 207 ~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (360)
T 3e3p_A 207 QHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLK 286 (360)
T ss_dssp SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCT
T ss_pred CCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhcc
Confidence 668999999999999999996 8876655544443332111110 11111
Q ss_pred CCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 658 KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 658 ~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
.++++.+||.+||+.||.+|||+.++|+||||.+..
T Consensus 287 ~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 322 (360)
T 3e3p_A 287 DAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322 (360)
T ss_dssp THHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred ccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence 346889999999999999999999999999998754
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-39 Score=370.14 Aligned_cols=257 Identities=26% Similarity=0.410 Sum_probs=215.3
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
....++|.+.+.||+|+||.||+|++..+++.||+|++..... .....+.+.+|+.+++.++||||++++++|.+
T Consensus 37 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 112 (335)
T 2owb_A 37 PRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED---- 112 (335)
T ss_dssp TTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC----
T ss_pred cccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec----
Confidence 3445789999999999999999999999999999999975432 33455678999999999999999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|+|||||+ ++|.+++.....+++.+++.++.||+.||+|
T Consensus 113 ------------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 156 (335)
T 2owb_A 113 ------------------------------------NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQY 156 (335)
T ss_dssp ------------------------------------SSEEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCeEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence 356899999997 5999999888899999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+ ..++.
T Consensus 157 LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~ 220 (335)
T 2owb_A 157 LHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG---------------ERKKVLCGTPNYIAPEVLSK-KGHSF 220 (335)
T ss_dssp HHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT---------------CCBCCCCSCCSSCCHHHHHT-SCBCT
T ss_pred HHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc---------------ccccccCCCccccCHHHhcc-CCCCc
Confidence 999999999999999999999999999999998643211 01234579999999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
++|||||||++|+|++ ||......+...........++. ..++.+.+||++||+.||.+|||+.++++|+||..
T Consensus 221 ~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~ 297 (335)
T 2owb_A 221 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK---HINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 297 (335)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCT---TSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHT
T ss_pred hhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCCc---cCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence 9999999999999996 77765555544444333333333 45678999999999999999999999999998764
Q ss_pred c
Q 000993 692 M 692 (1196)
Q Consensus 692 ~ 692 (1196)
.
T Consensus 298 ~ 298 (335)
T 2owb_A 298 G 298 (335)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-39 Score=360.96 Aligned_cols=255 Identities=26% Similarity=0.417 Sum_probs=213.7
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
...++|.+.+.||+|+||.||+|++..+++.||+|++..... .....+.+.+|+.+++.++||||+++++++.+
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----- 86 (294)
T 2rku_A 12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED----- 86 (294)
T ss_dssp TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----
T ss_pred CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeecc-----
Confidence 345789999999999999999999999999999999976532 33455678899999999999999999988732
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+||
T Consensus 87 -----------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~l 131 (294)
T 2rku_A 87 -----------------------------------NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYL 131 (294)
T ss_dssp -----------------------------------SSEEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 356899999997 59999998888999999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+ ..++.+
T Consensus 132 H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~ 195 (294)
T 2rku_A 132 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG---------------ERKKVLCGTPNYIAPEVLSK-KGHSFE 195 (294)
T ss_dssp HHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT---------------CCBCCCCSCCSSCCHHHHTT-SCBCTH
T ss_pred HHCCccccCCChHhEEEcCCCCEEEEeccCceecccCc---------------cccccccCCCCcCCcchhcc-CCCCch
Confidence 99999999999999999999999999999997643211 01233579999999999987 568999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
+||||||+++|+|++ ||......+............|. ..++.+.++|++||+.||.+|||+.++++|+||..
T Consensus 196 ~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 271 (294)
T 2rku_A 196 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK---HINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 271 (294)
T ss_dssp HHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCT---TSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHT
T ss_pred hhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCcc---ccCHHHHHHHHHHcccChhhCcCHHHHhhChheec
Confidence 999999999999997 77766555544444333333332 45678999999999999999999999999998754
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=389.06 Aligned_cols=271 Identities=15% Similarity=0.140 Sum_probs=199.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CCchhHHHHHHHH---HHHHhcCCCCeeeeeeeeeecCccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREV---ATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~~~~~~~~~Ev---~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
++|++.+.||+|+||+||+|+++.+|+.||||++.... ......+.+.+|+ ..|+.++|||||++++.|.....
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~-- 150 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD-- 150 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE--
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh--
Confidence 68999999999999999999999899999999998543 2334567889999 55555689999999965532100
Q ss_pred cCCCCcCCCCccccccccccccc-ccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCH-------HHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAAS-SADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDK-------ELAWHLFRQI 528 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e-------~~~~~i~~qI 528 (1196)
.+...... ................|++||||+|+|.+++.....+++ ..++.++.||
T Consensus 151 ---------------~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi 215 (377)
T 3byv_A 151 ---------------LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQV 215 (377)
T ss_dssp ---------------EEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHH
T ss_pred ---------------hhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHH
Confidence 00000000 000000000011124799999999999999987655555 7888899999
Q ss_pred HHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 529 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 529 a~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
+.||+|||++||+||||||+|||++.++.+||+|||+|+.... .....+| +.|+|||++.+
T Consensus 216 ~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~------------------~~~~~~g-~~y~aPE~~~~ 276 (377)
T 3byv_A 216 IRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA------------------RVVSSVS-RGFEPPELEAR 276 (377)
T ss_dssp HHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTC------------------EEECCCC-TTCCCHHHHHH
T ss_pred HHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhheecCC------------------cccCCCC-cCccChhhhcc
Confidence 9999999999999999999999999999999999999975321 1234567 99999999987
Q ss_pred C----------CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCC
Q 000993 609 W----------PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 675 (1196)
Q Consensus 609 ~----------~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~ 675 (1196)
. ..|+.++|||||||+||||++ ||........... ....+...++++.+||.+||+.||.
T Consensus 277 ~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~-------~~~~~~~~~~~~~~li~~~L~~dp~ 349 (377)
T 3byv_A 277 RATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEW-------IFRSCKNIPQPVRALLEGFLRYPKE 349 (377)
T ss_dssp HTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGG-------GGSSCCCCCHHHHHHHHHHTCSSGG
T ss_pred cccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhh-------hhhhccCCCHHHHHHHHHHcCCCch
Confidence 3 168999999999999999997 7754432221111 1112245677999999999999999
Q ss_pred CCCCHHHHHhccCCCCchH
Q 000993 676 DRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 676 ~RPta~eiL~~~~~~~~~~ 694 (1196)
+|||+.++++|+||.++..
T Consensus 350 ~Rpt~~e~l~hp~f~~~~~ 368 (377)
T 3byv_A 350 DRLLPLQAMETPEYEQLRT 368 (377)
T ss_dssp GCCCHHHHHTSHHHHHHHH
T ss_pred hCCCHHHHhhChHHHHHHH
Confidence 9999999999999976543
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=371.64 Aligned_cols=261 Identities=22% Similarity=0.333 Sum_probs=203.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC---------chhHHHHHHHHHHHHhcCCCCeeeeeeeee
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---------LPVNDRILREVATLSRLQHQHVVRYYQAWF 450 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~---------~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~ 450 (1196)
.++|.+.+.||+|+||.||+|.+. +|+.||||++...... ....+.+.+|+.+++.++||||++++++|.
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 99 (362)
T 3pg1_A 21 QSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFV 99 (362)
T ss_dssp TCSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEE
T ss_pred ccceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEE
Confidence 478999999999999999999986 5999999998653322 122467999999999999999999999885
Q ss_pred ecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHHHHHHH
Q 000993 451 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIV 529 (1196)
Q Consensus 451 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qIa 529 (1196)
... ......+|+|||||+++|.+.+... ..+++..++.++.||+
T Consensus 100 ~~~-----------------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~ 144 (362)
T 3pg1_A 100 HFE-----------------------------------EPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHIL 144 (362)
T ss_dssp ECC-----------------------------------TTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHH
T ss_pred ecc-----------------------------------CCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHH
Confidence 421 0124578999999999999888754 3699999999999999
Q ss_pred HHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 530 EGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 530 ~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
.||+|||++||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.+.
T Consensus 145 ~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~~t~~y~aPE~~~~~ 208 (362)
T 3pg1_A 145 LGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA----------------NKTHYVTHRWYRAPELVMQF 208 (362)
T ss_dssp HHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCTTC-------------------------------CGGGCCHHHHTTC
T ss_pred HHHHHHHHCcCEecCCChHHEEEcCCCCEEEEecCccccccccc----------------ccceecccceecCcHHhcCC
Confidence 99999999999999999999999999999999999997532211 12345799999999999875
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC------------------------CC-----Ccccc
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE------------------------LP-----PSWVA 657 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~------------------------~p-----~~~~~ 657 (1196)
..++.++|||||||++|+|++ ||................+. .+ .....
T Consensus 209 ~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (362)
T 3pg1_A 209 KGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPT 288 (362)
T ss_dssp TTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTT
T ss_pred CCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCC
Confidence 678999999999999999996 88765544333322211110 01 01123
Q ss_pred CCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 658 KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 658 ~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
.++.+.+||.+||+.||.+|||+.++++||||...
T Consensus 289 ~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 323 (362)
T 3pg1_A 289 ADPVALDLIAKMLEFNPQRRISTEQALRHPYFESL 323 (362)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTT
T ss_pred CCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhc
Confidence 46789999999999999999999999999999876
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=366.28 Aligned_cols=254 Identities=24% Similarity=0.360 Sum_probs=204.0
Q ss_pred cccCCceEEeeeccCCcEEEEEEEE-ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCC------eeeeeeeee
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKN-KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH------VVRYYQAWF 450 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~-~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~Hpn------IV~l~~~~~ 450 (1196)
...++|++.+.||+|+||.||+|.+ +.+|+.||||+++. .......+.+|+.+++.++|+| |++++++|.
T Consensus 11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~ 87 (339)
T 1z57_A 11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN---VDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE 87 (339)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS---SHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE
T ss_pred CccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEec---CCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc
Confidence 3457999999999999999999998 56889999999863 2344567889999999997665 888888773
Q ss_pred ecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC--CCCHHHHHHHHHHH
Q 000993 451 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQI 528 (1196)
Q Consensus 451 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qI 528 (1196)
. ...+|+|||||+++|.+++.... .+++..++.++.||
T Consensus 88 ~----------------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi 127 (339)
T 1z57_A 88 H----------------------------------------HGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQI 127 (339)
T ss_dssp E----------------------------------------TTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHH
T ss_pred c----------------------------------------CCcEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHH
Confidence 2 35789999999889999998765 68999999999999
Q ss_pred HHHHHHHHhCCCcccCCCcCcEEecC-------------------CCCeEEeccCcchhccccccccCCCCCCCCCCccc
Q 000993 529 VEGLAHIHGQGIIHRDLTPNNIFFDA-------------------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV 589 (1196)
Q Consensus 529 a~gL~yLHs~gIiHrDLKp~NILld~-------------------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~ 589 (1196)
+.||+|||++||+||||||+|||++. ++.+||+|||+++....
T Consensus 128 ~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~------------------ 189 (339)
T 1z57_A 128 CKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE------------------ 189 (339)
T ss_dssp HHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTS------------------
T ss_pred HHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCcc------------------
Confidence 99999999999999999999999987 66899999999975321
Q ss_pred cCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCcc-----------
Q 000993 590 DGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW----------- 655 (1196)
Q Consensus 590 ~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~----------- 655 (1196)
......||+.|+|||++.+ ..++.++|||||||++|||++ ||......+............|..+
T Consensus 190 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 268 (339)
T 1z57_A 190 HHSTLVSTRHYRAPEVILA-LGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFH 268 (339)
T ss_dssp CCCSSCSCGGGCCHHHHTT-SCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEE
T ss_pred ccccccCCccccChHHhhC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHh
Confidence 1234579999999999987 568999999999999999996 7765544433222211112222110
Q ss_pred ------------------------------ccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 656 ------------------------------VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 656 ------------------------------~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
...++.+.+||.+||+.||.+|||+.++++|+||....
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 336 (339)
T 1z57_A 269 HDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLK 336 (339)
T ss_dssp TTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGG
T ss_pred hccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHHh
Confidence 01134678999999999999999999999999998764
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=364.40 Aligned_cols=254 Identities=20% Similarity=0.334 Sum_probs=202.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~ 457 (1196)
..++|++.+.||+|+||+||+|++..+++.||||+++.. ....+.+|+.+++.++ ||||+++++++.+.
T Consensus 34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~----- 103 (330)
T 3nsz_A 34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDP----- 103 (330)
T ss_dssp EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECT-----
T ss_pred CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-----chHHHHHHHHHHHHcCCCCCEEEeeeeeccC-----
Confidence 357899999999999999999999999999999998632 2467899999999997 99999999887431
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
.....++|||||+ ++|.+++.. +++..++.++.||+.||+|||
T Consensus 104 ---------------------------------~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~qi~~~l~~lH 147 (330)
T 3nsz_A 104 ---------------------------------VSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCH 147 (330)
T ss_dssp ---------------------------------TTCCEEEEEECCCCCCHHHHGGG---CCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCCceEEEEeccCchhHHHHHHh---CCHHHHHHHHHHHHHHHHHHH
Confidence 1346799999997 588888753 899999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCC-CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 537 GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
++||+||||||+|||++.++ .+||+|||+++...... ......||+.|+|||++.+...++.+
T Consensus 148 ~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~~ 211 (330)
T 3nsz_A 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ----------------EYNVRVASRYFKGPELLVDYQMYDYS 211 (330)
T ss_dssp HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC----------------CCCSCCSCGGGCCHHHHTTCCCCCTH
T ss_pred hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC----------------ccccccccccccChhhhcCCCcCCch
Confidence 99999999999999999777 89999999997643211 12345789999999999876679999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHH-HHHHHH------------hh-hcCCCC---------------------Ccccc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMER-QIVLSD------------LK-QKGELP---------------------PSWVA 657 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~-~~~~~~------------l~-~~~~~p---------------------~~~~~ 657 (1196)
+|||||||++|||++ ||...... ...... +. .....+ .....
T Consensus 212 ~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (330)
T 3nsz_A 212 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHL 291 (330)
T ss_dssp HHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGG
T ss_pred hhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhcccccccc
Confidence 999999999999996 77432111 111000 00 000111 11222
Q ss_pred CCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchH
Q 000993 658 KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 658 ~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~ 694 (1196)
.++++.+||++||+.||.+|||++++|+||||.++..
T Consensus 292 ~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~ 328 (330)
T 3nsz_A 292 VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK 328 (330)
T ss_dssp CCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC-
T ss_pred CCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhcc
Confidence 5789999999999999999999999999999998754
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-39 Score=374.06 Aligned_cols=262 Identities=27% Similarity=0.420 Sum_probs=209.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCC--CchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeec
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRL-QHQHVVRYYQAWFET 452 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~ 452 (1196)
.+++|++.+.||+|+||.||+|++. .+|+.||||+++.... .......+.+|+.+|+.+ +||||+++++++..
T Consensus 52 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 130 (355)
T 1vzo_A 52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT- 130 (355)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE-
T ss_pred cccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee-
Confidence 3579999999999999999999994 4899999999864321 112234567899999999 79999999988732
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~g 531 (1196)
...+|+|||||+ ++|.+++.....+++..++.++.||+.|
T Consensus 131 ---------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~a 171 (355)
T 1vzo_A 131 ---------------------------------------ETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLA 171 (355)
T ss_dssp ---------------------------------------TTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHH
T ss_pred ---------------------------------------CceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 356899999997 5999999988899999999999999999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC-C
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-P 610 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~ 610 (1196)
|+|||++||+||||||+|||++.++.+||+|||+++....... ......+||+.|+|||++.+. .
T Consensus 172 L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~~~ 237 (355)
T 1vzo_A 172 LEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET--------------ERAYDFCGTIEYMAPDIVRGGDS 237 (355)
T ss_dssp HHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGG--------------GGGCGGGSCCTTCCHHHHTTCC-
T ss_pred HHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCCC--------------CcccCcccCcCccChhhhcCCCC
Confidence 9999999999999999999999999999999999986532211 112345799999999999862 3
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhH----HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP----- 678 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~----~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP----- 678 (1196)
.++.++|||||||+||||++ ||.... ............ ++.....++.+.+||.+||..||.+||
T Consensus 238 ~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~ 314 (355)
T 1vzo_A 238 GHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE---PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPR 314 (355)
T ss_dssp --CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTT
T ss_pred CCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccC---CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCC
Confidence 47899999999999999997 775322 122222222222 223345567899999999999999999
Q ss_pred CHHHHHhccCCCCchHHHH
Q 000993 679 SATELLQDALPPQMEYELL 697 (1196)
Q Consensus 679 ta~eiL~~~~~~~~~~~~~ 697 (1196)
++.++++|+||....+..+
T Consensus 315 s~~ell~h~~f~~~~~~~l 333 (355)
T 1vzo_A 315 DADEIKEHLFFQKINWDDL 333 (355)
T ss_dssp THHHHHTSGGGTTCCHHHH
T ss_pred CHHHHHcCcchhcCChhHh
Confidence 9999999999999876644
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-38 Score=360.01 Aligned_cols=255 Identities=25% Similarity=0.426 Sum_probs=205.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++.+.||+|+||.||+|.+..+|+.||||++..... ...+.+|+.+++.++||||+++++++..
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 95 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD----LQEIIKEISIMQQCDSPHVVKYYGSYFK------- 95 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC----CHHHHHHHHHHHTCCCTTBCCEEEEEEE-------
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH----HHHHHHHHHHHHhCCCCCCccEEEEEEe-------
Confidence 34789999999999999999999999999999999975432 3568899999999999999999998743
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFE-SYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~-~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+|||||++ +|.+++. ....+++..++.++.||+.||.|||
T Consensus 96 ---------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 142 (314)
T 3com_A 96 ---------------------------------NTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH 142 (314)
T ss_dssp ---------------------------------TTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3467999999975 9999987 4567999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+||+++.++.+||+|||++....... .......||+.|+|||++.+ ..++.++
T Consensus 143 ~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 206 (314)
T 3com_A 143 FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM---------------AKRNTVIGTPFWMAPEVIQE-IGYNCVA 206 (314)
T ss_dssp HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB---------------SCBCCCCSCGGGCCHHHHSS-SCBCTTH
T ss_pred hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc---------------cccCccCCCCCccChhhcCC-CCCCccc
Confidence 9999999999999999999999999999997643211 11234579999999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||||||+++|+|++ ||..........................++.+.+||.+||+.||.+|||+.++++|+|+....
T Consensus 207 Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~ 286 (314)
T 3com_A 207 DIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAK 286 (314)
T ss_dssp HHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCC
T ss_pred cHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCC
Confidence 99999999999996 776655444333322222222222344567899999999999999999999999999987654
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-39 Score=380.46 Aligned_cols=259 Identities=25% Similarity=0.415 Sum_probs=188.7
Q ss_pred CCceE-EeeeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEE-LQPLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~-~~~LG~G~fG~Vy~a~~~--~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
+.|++ .++||+|+||+||+|+++ .+++.||||++..... ...+.+|+.+|+.++|||||+++++|...
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~----- 90 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSH----- 90 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC----CHHHHHHHHHHHHCCCTTBCCCCEEEEET-----
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC----CHHHHHHHHHHHhcCCCCeeeEeeEEecC-----
Confidence 45665 357999999999999977 5688999999864332 24678999999999999999999988542
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc---------CCCCHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY---------DHFDKELAWHLFRQI 528 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~---------~~l~e~~~~~i~~qI 528 (1196)
....+|+|||||+++|.+++... ..+++..++.++.||
T Consensus 91 ---------------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi 137 (405)
T 3rgf_A 91 ---------------------------------ADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQI 137 (405)
T ss_dssp ---------------------------------TTTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHH
T ss_pred ---------------------------------CCCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHH
Confidence 24578999999999999888532 249999999999999
Q ss_pred HHHHHHHHhCCCcccCCCcCcEEe----cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCch
Q 000993 529 VEGLAHIHGQGIIHRDLTPNNIFF----DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 604 (1196)
Q Consensus 529 a~gL~yLHs~gIiHrDLKp~NILl----d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 604 (1196)
+.||+|||++||+||||||+|||+ +.++.+||+|||+|+........ .......+||+.|+|||
T Consensus 138 ~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~------------~~~~~~~~gt~~y~aPE 205 (405)
T 3rgf_A 138 LDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP------------LADLDPVVVTFWYRAPE 205 (405)
T ss_dssp HHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------------------CCCTTCCHH
T ss_pred HHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcc------------cccCCCceecCcccCch
Confidence 999999999999999999999999 67789999999999865422100 11234568999999999
Q ss_pred hccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHH---------HHHHHHhhhcCCCC-Cccc---------------
Q 000993 605 IEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMER---------QIVLSDLKQKGELP-PSWV--------------- 656 (1196)
Q Consensus 605 ~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~---------~~~~~~l~~~~~~p-~~~~--------------- 656 (1196)
++.+...++.++|||||||+||||++ ||...... .....+....+..+ ..|.
T Consensus 206 ~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~ 285 (405)
T 3rgf_A 206 LLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDF 285 (405)
T ss_dssp HHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHC
T ss_pred hhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhc
Confidence 99885669999999999999999996 77533221 11111111111110 1111
Q ss_pred -------------------cCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 657 -------------------AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 657 -------------------~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
..++.+.+||++||+.||.+|||++++|+||||....
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~ 341 (405)
T 3rgf_A 286 RRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP 341 (405)
T ss_dssp CGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSS
T ss_pred cccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCC
Confidence 1145788999999999999999999999999998653
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=373.88 Aligned_cols=256 Identities=24% Similarity=0.348 Sum_probs=204.4
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCC-----eeeeeeee
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQH-----VVRYYQAW 449 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-Hpn-----IV~l~~~~ 449 (1196)
...+.++|++.+.||+|+||+||+|+++.+++.||||+++. .......+.+|+.+++.++ |+| |++++++|
T Consensus 49 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~ 125 (382)
T 2vx3_A 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN---KKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHF 125 (382)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECS---SHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEE
T ss_pred CCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEec---cHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeee
Confidence 45567899999999999999999999999999999999863 2334567788999998885 554 88888777
Q ss_pred eecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc--CCCCHHHHHHHHHH
Q 000993 450 FETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQ 527 (1196)
Q Consensus 450 ~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~q 527 (1196)
.. ...+|+|||||+++|.+++... ..+++..++.++.|
T Consensus 126 ~~----------------------------------------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~q 165 (382)
T 2vx3_A 126 MF----------------------------------------RNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQ 165 (382)
T ss_dssp EE----------------------------------------TTEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHH
T ss_pred cc----------------------------------------CCceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHH
Confidence 32 3578999999999999999765 46999999999999
Q ss_pred HHHHHHHHH--hCCCcccCCCcCcEEec--CCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCc
Q 000993 528 IVEGLAHIH--GQGIIHRDLTPNNIFFD--ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 603 (1196)
Q Consensus 528 Ia~gL~yLH--s~gIiHrDLKp~NILld--~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 603 (1196)
|+.||+||| +.||+||||||+|||++ .++.+||+|||+|+.... .....+||+.|+||
T Consensus 166 i~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~------------------~~~~~~~t~~y~aP 227 (382)
T 2vx3_A 166 MCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ------------------RIYQYIQSRFYRSP 227 (382)
T ss_dssp HHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTC------------------CCCSSCSCGGGCCH
T ss_pred HHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceeccc------------------ccccccCCccccCh
Confidence 999999999 46999999999999995 467899999999976421 12345799999999
Q ss_pred hhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccc------------------------
Q 000993 604 EIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWV------------------------ 656 (1196)
Q Consensus 604 E~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~------------------------ 656 (1196)
|++.+ ..++.++|||||||++|||++ ||......+....+....+..|..+.
T Consensus 228 E~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (382)
T 2vx3_A 228 EVLLG-MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTK 306 (382)
T ss_dssp HHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCC
T ss_pred HHHcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhcccccccccccc
Confidence 99998 569999999999999999997 88766555444333322111110000
Q ss_pred -------------------------------------cCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 657 -------------------------------------AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 657 -------------------------------------~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
...+++.+||++||+.||.+|||+.++|+||||.+..
T Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~~ 380 (382)
T 2vx3_A 307 DGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTA 380 (382)
T ss_dssp TTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC--
T ss_pred ccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccCC
Confidence 0013678999999999999999999999999998754
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-39 Score=370.20 Aligned_cols=260 Identities=23% Similarity=0.369 Sum_probs=205.5
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC------chhHHHHHHHHHHHHhcCCCCeeeeeeeeee
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS------LPVNDRILREVATLSRLQHQHVVRYYQAWFE 451 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~------~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e 451 (1196)
...++|++.+.||+|+||.||+|+++.+++.||||++...... ......+.+|+.+|+.++||||+++++++..
T Consensus 7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 86 (322)
T 2ycf_A 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 86 (322)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC
Confidence 3457899999999999999999999999999999998654321 1123458899999999999999999988621
Q ss_pred cCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHH
Q 000993 452 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVE 530 (1196)
Q Consensus 452 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~ 530 (1196)
..+|+|||||++ +|.+++.....+++..++.++.||+.
T Consensus 87 -----------------------------------------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~ 125 (322)
T 2ycf_A 87 -----------------------------------------EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125 (322)
T ss_dssp -----------------------------------------SSEEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHH
T ss_pred -----------------------------------------CceEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 126999999975 99999988889999999999999999
Q ss_pred HHHHHHhCCCcccCCCcCcEEecCCCC---eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 531 GLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 531 gL~yLHs~gIiHrDLKp~NILld~~~~---vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
||+|||++||+||||||+|||++.++. +||+|||+++...... ......||+.|+|||++.
T Consensus 126 ~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~gt~~y~aPE~~~ 189 (322)
T 2ycf_A 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----------------LMRTLCGTPTYLAPEVLV 189 (322)
T ss_dssp HHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCH----------------HHHHHHSCCTTCCHHHHH
T ss_pred HHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceeccccc----------------ccccccCCcCccCchhhc
Confidence 999999999999999999999987664 9999999997643211 112347899999999974
Q ss_pred --CCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhh-hcCCC-CCccccCCHHHHHHHHHcccCCCCCCCCH
Q 000993 608 --GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLK-QKGEL-PPSWVAKFSEQESLLRRLMSPSPSDRPSA 680 (1196)
Q Consensus 608 --~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~-~~~~~-p~~~~~~~~~l~~LI~~cL~~dP~~RPta 680 (1196)
+...++.++|||||||++|+|++ ||............+. ..... +..+...++.+.+||++||+.||.+|||+
T Consensus 190 ~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~ 269 (322)
T 2ycf_A 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 269 (322)
T ss_dssp HTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred cCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCH
Confidence 23568999999999999999996 7764432211111121 12222 22345677899999999999999999999
Q ss_pred HHHHhccCCCCchH
Q 000993 681 TELLQDALPPQMEY 694 (1196)
Q Consensus 681 ~eiL~~~~~~~~~~ 694 (1196)
.++++|+|+.....
T Consensus 270 ~~~l~h~~~~~~~~ 283 (322)
T 2ycf_A 270 EEALRHPWLQDEDM 283 (322)
T ss_dssp HHHHTSGGGCCHHH
T ss_pred HHHhhCcCcCCHHH
Confidence 99999999987643
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=358.85 Aligned_cols=259 Identities=29% Similarity=0.526 Sum_probs=215.4
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.+.+.++|++.+.||+|+||.||+|+++.+++.||||++............+.+|+.+++.++||||+++++++.+
T Consensus 17 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 92 (287)
T 2wei_A 17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED---- 92 (287)
T ss_dssp THHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC----
T ss_pred HHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeC----
Confidence 4556789999999999999999999999999999999997655444456789999999999999999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|+||||++ ++|.+.+.....+++..++.++.||+.||+|
T Consensus 93 ------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~ 136 (287)
T 2wei_A 93 ------------------------------------SSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITY 136 (287)
T ss_dssp ------------------------------------SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCeEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 356799999996 5999999888889999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCC---CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
||++||+||||||+||+++.+ +.+||+|||+++...... ......||+.|+|||++.+ .
T Consensus 137 LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~--~ 198 (287)
T 2wei_A 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT----------------KMKDRIGTAYYIAPEVLRG--T 198 (287)
T ss_dssp HHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS----------------SCSCHHHHHTTCCHHHHTT--C
T ss_pred HHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCC----------------ccccccCcccccChHHhcC--C
Confidence 999999999999999999764 469999999998643211 1233468999999999986 4
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
++.++||||||+++|+|++ ||...................+ +.+...++++.++|++||+.||.+|||+.++++|+
T Consensus 199 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp 278 (287)
T 2wei_A 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHP 278 (287)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSH
T ss_pred CCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCH
Confidence 8999999999999999996 7776655544433333222222 34456788999999999999999999999999999
Q ss_pred CCCCc
Q 000993 688 LPPQM 692 (1196)
Q Consensus 688 ~~~~~ 692 (1196)
||.+.
T Consensus 279 ~~~~~ 283 (287)
T 2wei_A 279 WIQKY 283 (287)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 87643
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-38 Score=364.15 Aligned_cols=253 Identities=20% Similarity=0.306 Sum_probs=204.0
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
...++|++.+.||+|+||.||+|++..+++ .||||+++.. ........+.+|+.+++.++||||++++++|.+
T Consensus 46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 121 (325)
T 3kul_A 46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG-YTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR--- 121 (325)
T ss_dssp CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG---
T ss_pred cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe---
Confidence 345789999999999999999999986555 5999998743 344456789999999999999999999998732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL 532 (1196)
...+|+|||||+ ++|.+++... ..+++..++.++.||+.||
T Consensus 122 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L 164 (325)
T 3kul_A 122 -------------------------------------GRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGM 164 (325)
T ss_dssp -------------------------------------GGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence 345799999996 5999999754 5799999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||++||+||||||+|||++.++.+||+|||+++....... .........+|+.|+|||++.+ ..+
T Consensus 165 ~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~------------~~~~~~~~~~t~~y~aPE~~~~-~~~ 231 (325)
T 3kul_A 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD------------AAYTTTGGKIPIRWTAPEAIAF-RTF 231 (325)
T ss_dssp HHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----------------CCEECC---CCGGGSCHHHHHH-CEE
T ss_pred HHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCcc------------ceeeccCCCCcccccCHhHhcC-CCC
Confidence 999999999999999999999999999999999986532210 0112234567889999999987 568
Q ss_pred CCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 613 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+.++|||||||++|||++ ||.............. ...++.....++.+.+||.+||+.||.+|||+.++++.
T Consensus 232 ~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~ 307 (325)
T 3kul_A 232 SSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEE--GYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSV 307 (325)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHT--TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc--CCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 999999999999999986 7766655554433322 23333445667899999999999999999999999864
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-39 Score=382.30 Aligned_cols=282 Identities=16% Similarity=0.211 Sum_probs=192.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhc--CCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL--QHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L--~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.+|.+.+.||+|+||.||+|+++.+|+.||||++..... .......+.+|+.+++.+ +||||++++..++...
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~---- 137 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPS---- 137 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCC----
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeee----
Confidence 469999999999999999999999999999999987554 233455677885555444 6999998764442100
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC-CCCHHHH------HHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELA------WHLFRQIVE 530 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~------~~i~~qIa~ 530 (1196)
+.....+. .................+|+|||||+++|.+++...+ .+.+... +.++.||+.
T Consensus 138 --d~~~~~~~----------~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~ 205 (371)
T 3q60_A 138 --DAVAVQSQ----------PPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIR 205 (371)
T ss_dssp --EEEEETTS----------CSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHH
T ss_pred --hheecCCC----------CCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccccchhhhhhhhhHHHHHHHHHH
Confidence 00000000 0000000000011235689999999999999997643 3444445 577799999
Q ss_pred HHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC-
Q 000993 531 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW- 609 (1196)
Q Consensus 531 gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~- 609 (1196)
||+|||++||+||||||+|||++.++.+||+|||+|+..... .....+|+.|+|||++.+.
T Consensus 206 aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~------------------~~~~~~t~~y~aPE~~~~~~ 267 (371)
T 3q60_A 206 LAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR------------------GPASSVPVTYAPREFLNAST 267 (371)
T ss_dssp HHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCE------------------EEGGGSCGGGCCHHHHTCSE
T ss_pred HHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceeeecCCC------------------ccCccCCcCCcChhhccCCC
Confidence 999999999999999999999999999999999999864311 1134677999999999751
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHH-----Hhh-hcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLS-----DLK-QKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA 680 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~-----~l~-~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta 680 (1196)
..++.++|||||||+||||++ ||........... ... ......+.+...++.+.+||.+||+.||.+|||+
T Consensus 268 ~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 347 (371)
T 3q60_A 268 ATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLP 347 (371)
T ss_dssp EECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCH
T ss_pred CCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCH
Confidence 358999999999999999997 7765432110000 000 0011122334667899999999999999999999
Q ss_pred HHHHhccCCCCchHHH
Q 000993 681 TELLQDALPPQMEYEL 696 (1196)
Q Consensus 681 ~eiL~~~~~~~~~~~~ 696 (1196)
.++++||||.+..+..
T Consensus 348 ~e~l~hp~f~~~~~~~ 363 (371)
T 3q60_A 348 LEAMETPEFLQLQNEI 363 (371)
T ss_dssp HHHTTSHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHH
Confidence 9999999998776553
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=363.04 Aligned_cols=254 Identities=22% Similarity=0.366 Sum_probs=200.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.-++|.+.+.||+|+||+||+|++..+|+.||||+++.... ....+.+.+|+.+|+.++||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 79 (319)
T 4euu_A 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEET------ 79 (319)
T ss_dssp SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT------
T ss_pred CCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCcceEEEEeecC------
Confidence 34689999999999999999999999999999999874332 22356788999999999999999999887432
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCC---CCHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH---FDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~---l~e~~~~~i~~qIa~gL~y 534 (1196)
....+|+|||||+ ++|.+++..... +++..++.++.||+.||+|
T Consensus 80 --------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~ 127 (319)
T 4euu_A 80 --------------------------------TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNH 127 (319)
T ss_dssp --------------------------------TTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHH
Confidence 2346799999996 699999976543 9999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEe----cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--
Q 000993 535 IHGQGIIHRDLTPNNIFF----DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG-- 608 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILl----d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-- 608 (1196)
||++||+||||||+|||+ +.++.+||+|||+++...... ......||+.|+|||++..
T Consensus 128 LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~ 191 (319)
T 4euu_A 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE----------------QFVSLYGTEEYLHPDMYERAV 191 (319)
T ss_dssp HHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTC----------------CBCCCCSCGGGCCHHHHHHHT
T ss_pred HHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCC----------------ceeecccCCCccCHHHhhhcc
Confidence 999999999999999999 777889999999998653221 1234579999999999862
Q ss_pred -----CCCCCCcchhHHHHHHHHHhhc---CCch----hHHHHHHHHHhhhcCC-------------------CCC---c
Q 000993 609 -----WPKIDEKADMYSLGIVFFELWH---PFST----AMERQIVLSDLKQKGE-------------------LPP---S 654 (1196)
Q Consensus 609 -----~~~~s~ksDVwSlGviLyELlt---Pf~~----~~~~~~~~~~l~~~~~-------------------~p~---~ 654 (1196)
...++.++|||||||++|||++ ||.. ....+.....+..... .+. .
T Consensus 192 ~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (319)
T 4euu_A 192 LRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSL 271 (319)
T ss_dssp SCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSS
T ss_pred ccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCccccc
Confidence 2568999999999999999996 7752 2223333333332211 111 0
Q ss_pred cccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 655 WVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 655 ~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
.....+.+.+||++||+.||.+|||++++|+|+
T Consensus 272 ~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 272 SRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp CHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred chhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence 011224678999999999999999999999986
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-39 Score=365.85 Aligned_cols=258 Identities=24% Similarity=0.363 Sum_probs=198.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|.+.+.||+|+||+||+|.+..+++.||+|++.. ........+.+|+.+++.++||||+++++++.+
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------- 78 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR--FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK-------- 78 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE--------
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc--CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEec--------
Confidence 4789999999999999999999999999999998853 344566789999999999999999999998843
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+|||||+ ++|.+++.. ...+++.+++.++.||+.||+|||+
T Consensus 79 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~ 126 (310)
T 3s95_A 79 --------------------------------DKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS 126 (310)
T ss_dssp --------------------------------TTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 356899999996 499999987 5679999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++.+||+|||+++............. .............+||+.|+|||++.+ ..++.++|
T Consensus 127 ~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~D 204 (310)
T 3s95_A 127 MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLR-SLKKPDRKKRYTVVGNPYWMAPEMING-RSYDEKVD 204 (310)
T ss_dssp TTEECSCCSTTSEEECTTSCEEECCCTTCEECC---------------------CCCCSCGGGCCHHHHTT-CCCCTHHH
T ss_pred CCccCCCCCcCeEEECCCCCEEEeecccceecccccccccccc-cccccccccccccCCCcceeCHHHhcC-CCCCcHHH
Confidence 9999999999999999999999999999987543321110000 000000111235689999999999988 67899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHH----HHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQI----VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~----~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
||||||++|||++ ||........ ...... ....+ ...++.+.++|.+||+.||.+|||+.++++
T Consensus 205 i~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~l~~li~~~l~~dP~~Rps~~~l~~ 275 (310)
T 3s95_A 205 VFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFL-DRYCP---PNCPPSFFPITVRCCDLDPEKRPSFVKLEH 275 (310)
T ss_dssp HHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHH-HHTCC---TTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccc-cccCC---CCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 9999999999996 4433211000 000000 01112 234457899999999999999999999986
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=369.78 Aligned_cols=252 Identities=23% Similarity=0.341 Sum_probs=203.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEE-----ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKN-----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~-----~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~ 453 (1196)
.++|++.+.||+|+||.||+|++ ..+++.||||+++.. ........+.+|+.+++.+ +|||||+++++|.+.
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~- 98 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP- 98 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST-
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCc-CCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecC-
Confidence 47899999999999999999994 456789999999743 3344556799999999999 899999999988432
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCC-----------------
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDH----------------- 515 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~----------------- 515 (1196)
...+|+|||||++ +|.+++.....
T Consensus 99 --------------------------------------~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 140 (359)
T 3vhe_A 99 --------------------------------------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKD 140 (359)
T ss_dssp --------------------------------------TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------
T ss_pred --------------------------------------CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccc
Confidence 2346899999975 99999976533
Q ss_pred -------------------------------------------------CCHHHHHHHHHHHHHHHHHHHhCCCcccCCC
Q 000993 516 -------------------------------------------------FDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 546 (1196)
Q Consensus 516 -------------------------------------------------l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLK 546 (1196)
+++..++.++.||+.||+|||++||+|||||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dik 220 (359)
T 3vhe_A 141 YVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA 220 (359)
T ss_dssp -------------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred cccccchhhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 8999999999999999999999999999999
Q ss_pred cCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHH
Q 000993 547 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 626 (1196)
Q Consensus 547 p~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLy 626 (1196)
|+|||++.++.+||+|||+++...... .........||+.|+|||++.+ ..++.++|||||||++|
T Consensus 221 p~NIll~~~~~~kl~Dfg~a~~~~~~~-------------~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~ 286 (359)
T 3vhe_A 221 ARNILLSEKNVVKICDFGLARDIYKDP-------------DYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLW 286 (359)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTSCT-------------TCEEC--CEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHH
T ss_pred hhhEEEcCCCcEEEEeccceeeecccc-------------cchhccccCCCceeEChhhhcC-CCCCchhhhhhHHHHHH
Confidence 999999999999999999998643211 0112344578999999999987 57899999999999999
Q ss_pred Hhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 627 ELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 627 ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||++ ||............+.. ...++.....++++.++|.+||+.||.+|||+.++++|
T Consensus 287 ellt~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 349 (359)
T 3vhe_A 287 EIFSLGASPYPGVKIDEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349 (359)
T ss_dssp HHTTTSCCSSTTCCCSHHHHHHHHH-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHhcCCCCCCccchhHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 9996 77655433333333332 22233334567899999999999999999999999987
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-38 Score=356.82 Aligned_cols=252 Identities=29% Similarity=0.447 Sum_probs=210.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.+.|++++.||+|+||.||+|++..+++.||||++..... ....+.+.+|+.+++.++||||++++++|.+
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 91 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-------- 91 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC-STTHHHHHHHHHHHHHCCCTTBCCEEEEEEE--------
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEec--------
Confidence 4679999999999999999999999999999999976543 2346789999999999999999999998743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+||||+++ +|.+++.. ..+++..++.++.||+.||+|||++
T Consensus 92 --------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~ 138 (303)
T 3a7i_A 92 --------------------------------DTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSE 138 (303)
T ss_dssp --------------------------------TTEEEEEEECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCeEEEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3468999999975 89988864 5799999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+||+++.++.+||+|||++....... .......||+.|+|||++.+ ..++.++||
T Consensus 139 ~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di 202 (303)
T 3a7i_A 139 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ---------------IKRNTFVGTPFWMAPEVIKQ-SAYDSKADI 202 (303)
T ss_dssp TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB---------------CCBCCCCSCGGGCCHHHHTT-CCBCTHHHH
T ss_pred CCccCCCChheEEECCCCCEEEeecccceecCccc---------------cccCccCCCcCccCHHHHhc-CCCCchhhh
Confidence 99999999999999999999999999997653221 11234579999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
|||||++|+|++ ||.............. ...+......++.+.+||.+||+.||.+|||+.++++|+|+..
T Consensus 203 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~ 276 (303)
T 3a7i_A 203 WSLGITAIELARGEPPHSELHPMKVLFLIPK--NNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 276 (303)
T ss_dssp HHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH--SCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHH
T ss_pred HHHHHHHHHHccCCCCCCCcCHHHHHHHhhc--CCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhc
Confidence 999999999996 7766554443333222 2233333456778999999999999999999999999998743
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-39 Score=363.42 Aligned_cols=267 Identities=24% Similarity=0.373 Sum_probs=187.8
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
....++|++.+.||+|+||.||+|.+..+++.||||++..... ......+.+|+.+++.++||||+++++++..
T Consensus 11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 84 (303)
T 2vwi_A 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVV----- 84 (303)
T ss_dssp --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEES-----
T ss_pred ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc-chhHHHHHHHHHHHhhcCCCCEeeEEEEEee-----
Confidence 3445899999999999999999999998999999998865432 2335678899999999999999999998743
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh--------cCCCCHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--------YDHFDKELAWHLFRQ 527 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--------~~~l~e~~~~~i~~q 527 (1196)
...+|+||||++ ++|.+++.. ...+++..++.++.|
T Consensus 85 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~q 129 (303)
T 2vwi_A 85 -----------------------------------KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 129 (303)
T ss_dssp -----------------------------------SSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHH
T ss_pred -----------------------------------cCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHH
Confidence 345799999996 599998864 356999999999999
Q ss_pred HHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 528 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 528 Ia~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
|+.||+|||++||+||||||+||+++.++.+||+|||+++......... .........||+.|+|||++.
T Consensus 130 i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~----------~~~~~~~~~~~~~y~aPE~~~ 199 (303)
T 2vwi_A 130 VLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDIT----------RNKVRKTFVGTPCWMAPEVME 199 (303)
T ss_dssp HHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC-------------------------CCCTTCCHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCcc----------chhhhcccCCCccccCHHHhc
Confidence 9999999999999999999999999999999999999998654221000 001123457999999999987
Q ss_pred CCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC-------CCccccCCHHHHHHHHHcccCCCCCC
Q 000993 608 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-------PPSWVAKFSEQESLLRRLMSPSPSDR 677 (1196)
Q Consensus 608 ~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~-------p~~~~~~~~~l~~LI~~cL~~dP~~R 677 (1196)
+...++.++|||||||++|||++ ||................... +......++++.+||.+||+.||.+|
T Consensus 200 ~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 279 (303)
T 2vwi_A 200 QVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKR 279 (303)
T ss_dssp HHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGS
T ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhC
Confidence 53458999999999999999996 776554443333332221111 11223456789999999999999999
Q ss_pred CCHHHHHhccCCCCchH
Q 000993 678 PSATELLQDALPPQMEY 694 (1196)
Q Consensus 678 Pta~eiL~~~~~~~~~~ 694 (1196)
||+.++++|+||.+...
T Consensus 280 ps~~~ll~h~~~~~~~~ 296 (303)
T 2vwi_A 280 PTAAELLRHKFFQKAKN 296 (303)
T ss_dssp CCHHHHHTSTTC-----
T ss_pred cCHHHHhhChhhhcCCC
Confidence 99999999999987643
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-38 Score=360.07 Aligned_cols=262 Identities=21% Similarity=0.388 Sum_probs=205.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.++|++.+.||+|+||.||+|++..+|+.||||++..... ....+.+|+.+++.+ +||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~---- 95 (326)
T 2x7f_A 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP---- 95 (326)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC-----
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc---cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccC----
Confidence 5789999999999999999999999999999999975432 245788999999999 89999999999854310
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
......+|+|||||++ +|.+++... ..+++..++.++.||+.||+||
T Consensus 96 ------------------------------~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l 145 (326)
T 2x7f_A 96 ------------------------------PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 145 (326)
T ss_dssp -------------------------------CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------ccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH
Confidence 0114578999999975 999999764 5699999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC----CCC
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPK 611 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~ 611 (1196)
|++||+||||||+|||++.++.+||+|||++....... .......||+.|+|||++.+ ...
T Consensus 146 H~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~ 210 (326)
T 2x7f_A 146 HQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV---------------GRRNTFIGTPYWMAPEVIACDENPDAT 210 (326)
T ss_dssp HHTTCCCCCCSGGGEEECTTCCEEECCCTTTC----------------------------CCGGGCCHHHHC--------
T ss_pred HHCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCc---------------cccccccCCccccChhhhccccccCcC
Confidence 99999999999999999999999999999997653211 01234579999999999863 245
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccC
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 688 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~ 688 (1196)
++.++|||||||++|+|++ ||.............. ...........++.+.+||.+||..||.+|||+.++++|+|
T Consensus 211 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~ 289 (326)
T 2x7f_A 211 YDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-NPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPF 289 (326)
T ss_dssp CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-SCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHH
T ss_pred CCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhc-CccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChH
Confidence 8999999999999999996 7766555444333322 22222223445679999999999999999999999999999
Q ss_pred CCCchH
Q 000993 689 PPQMEY 694 (1196)
Q Consensus 689 ~~~~~~ 694 (1196)
|.....
T Consensus 290 ~~~~~~ 295 (326)
T 2x7f_A 290 IRDQPN 295 (326)
T ss_dssp HHCCTT
T ss_pred HhhCcc
Confidence 877643
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-38 Score=364.73 Aligned_cols=257 Identities=24% Similarity=0.363 Sum_probs=205.7
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCC-cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCC------eeeeeeee
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDG-RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH------VVRYYQAW 449 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g-~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~Hpn------IV~l~~~~ 449 (1196)
....++|++.+.||+|+||+||+|++..++ +.||||+++. .......+.+|+.+++.++|+| ++.+++++
T Consensus 15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 91 (355)
T 2eu9_A 15 DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN---VGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWF 91 (355)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEE
T ss_pred ceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcc---cccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeee
Confidence 345689999999999999999999998777 6899999863 2344567889999999998766 77777665
Q ss_pred eecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC--CCCHHHHHHHHHH
Q 000993 450 FETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQ 527 (1196)
Q Consensus 450 ~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~q 527 (1196)
. ....+|+|||||+++|.+.+.... .+++.+++.++.|
T Consensus 92 ~----------------------------------------~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~q 131 (355)
T 2eu9_A 92 N----------------------------------------FHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQ 131 (355)
T ss_dssp E----------------------------------------ETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHH
T ss_pred e----------------------------------------eCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHH
Confidence 2 235789999999999888887653 6999999999999
Q ss_pred HHHHHHHHHhCCCcccCCCcCcEEe-------------------cCCCCeEEeccCcchhccccccccCCCCCCCCCCcc
Q 000993 528 IVEGLAHIHGQGIIHRDLTPNNIFF-------------------DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVS 588 (1196)
Q Consensus 528 Ia~gL~yLHs~gIiHrDLKp~NILl-------------------d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~ 588 (1196)
|+.||+|||++||+||||||+|||+ +.++.+||+|||+++....
T Consensus 132 i~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~----------------- 194 (355)
T 2eu9_A 132 LCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE----------------- 194 (355)
T ss_dssp HHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTS-----------------
T ss_pred HHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccccc-----------------
Confidence 9999999999999999999999999 5678999999999975321
Q ss_pred ccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCcc----------
Q 000993 589 VDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW---------- 655 (1196)
Q Consensus 589 ~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~---------- 655 (1196)
......||+.|+|||++.+ ..++.++|||||||++|||++ ||......+.........+..|..+
T Consensus 195 -~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 272 (355)
T 2eu9_A 195 -HHTTIVATRHYRPPEVILE-LGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYF 272 (355)
T ss_dssp -CCCSSCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGE
T ss_pred -cccCCcCCCcccCCeeeec-CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhh
Confidence 1234579999999999987 568999999999999999996 7876554443332222222222111
Q ss_pred -------------------------------ccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchHH
Q 000993 656 -------------------------------VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYE 695 (1196)
Q Consensus 656 -------------------------------~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~~ 695 (1196)
...++++.+||++||+.||.+|||+.++++|+||.+...+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 343 (355)
T 2eu9_A 273 YKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPE 343 (355)
T ss_dssp ETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCCHH
T ss_pred cccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCChh
Confidence 0112467899999999999999999999999999987654
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-38 Score=356.32 Aligned_cols=254 Identities=27% Similarity=0.391 Sum_probs=199.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEE----EccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCK----NKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~----~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
..++|++++.||+|+||+||+|+ +..+++.||||++.. ......+.+.+|+.+++.++||||++++++|...
T Consensus 8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-- 83 (295)
T 3ugc_A 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH--STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA-- 83 (295)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESC--CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHH--
T ss_pred CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEccc--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC--
Confidence 34789999999999999999999 456899999999863 3344557899999999999999999999987432
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL 532 (1196)
....+|+|||||+ ++|.+++.... .+++..++.++.||+.||
T Consensus 84 ------------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l 127 (295)
T 3ugc_A 84 ------------------------------------GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 127 (295)
T ss_dssp ------------------------------------HHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHH
Confidence 1345799999996 59999997654 599999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||++||+||||||+|||++.++.+||+|||+++........ ........+|+.|+|||++.+ ..+
T Consensus 128 ~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~ 194 (295)
T 3ugc_A 128 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEF------------FKVKEPGESPIFWYAPESLTE-SKF 194 (295)
T ss_dssp HHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-------------------------CTTCGGGGCCHHHHHH-CCC
T ss_pred HHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcce------------eeeccCCCCccceeCcHHhcC-CCC
Confidence 9999999999999999999999999999999999875422110 011233467889999999988 568
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHH---------------HHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCC
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQ---------------IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 674 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~---------------~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP 674 (1196)
+.++|||||||++|||++ ||....... .....+. ....++.....++++.+||++||+.||
T Consensus 195 ~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp 273 (295)
T 3ugc_A 195 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK-NNGRLPRPDGCPDEIYMIMTECWNNNV 273 (295)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHH-TTCCCCCCTTCCHHHHHHHHHHSCSSG
T ss_pred ChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHh-ccCcCCCCcCcCHHHHHHHHHHcCCCh
Confidence 999999999999999997 444322110 1112222 233334445667899999999999999
Q ss_pred CCCCCHHHHHhc
Q 000993 675 SDRPSATELLQD 686 (1196)
Q Consensus 675 ~~RPta~eiL~~ 686 (1196)
.+|||+.++++.
T Consensus 274 ~~Rps~~el~~~ 285 (295)
T 3ugc_A 274 NQRPSFRDLALR 285 (295)
T ss_dssp GGSCCHHHHHHH
T ss_pred hhCCCHHHHHHH
Confidence 999999999864
|
| >2i4l_A Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseudomonas palustris} PDB: 2i4m_A* 2i4n_A* 2i4o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=400.37 Aligned_cols=372 Identities=10% Similarity=0.019 Sum_probs=269.2
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC--CcccccceEEEeecCCceEeecC---CC
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD--CPQFKRNTVKLLTHGGDLLELSH---EL 809 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~--~~~~~~~my~f~D~~G~~laLRP---D~ 809 (1196)
+.++|++||+|.+++++++|++.+++.|.++||++|.||+| ++... ++.+.++||+|.|++|+.++||| |+
T Consensus 54 ~~~~G~~d~lP~g~~~~~~i~~~ir~~~~~~G~~ei~tP~l~~~el~~~sg~~d~~~~em~~~~d~~~~~~~LrPt~ee~ 133 (458)
T 2i4l_A 54 QEAAGIYAWLPLGHRVLKKIEQIVREEQNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIADRHKRELLYGPTNEEM 133 (458)
T ss_dssp EEETTEEEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHHHHTHHHHSCTTSEEEECTTCCEEEECSCCHHH
T ss_pred ccCCcceEECCCHHHHHHHHHHHHHHHHHHcCCEEEEcCccCcHHHHHhcCCccccccceEEEEeCCCCeEEECCCChHH
Confidence 45799999999999999999999999999999999999999 22222 34678999999999999999999 99
Q ss_pred cHHHHHHHHh-CCCCceeEEEecCeeecC-CCCCC---CcceeEeEEEEeCCCCccchHHHHHH---HHHHHHHcCCCCc
Q 000993 810 RLPFIRWAIS-NQKSSFKRYEISSVYRRA-IGHSP---PNRYLQGDFDIIGGASALTEAEVLKV---TMDIVTRFFHAES 881 (1196)
Q Consensus 810 T~~iaR~~a~-~~~~P~r~~Y~G~VfR~e-~~~~~---~~ef~Q~GvEiiG~~~~~aDaEvI~l---a~~~L~~lgi~~~ 881 (1196)
|++++|..+. ++..|+|+||+|+|||+| +|+.+ .+||+|+|+|+||.++..+|+|++.+ +.++|+.||++
T Consensus 134 t~~i~r~~~~s~~~lP~rl~~ig~~fR~E~~p~~Gl~R~REF~q~d~~~f~~~~~~ad~e~~~~~~~~~~i~~~lGl~-- 211 (458)
T 2i4l_A 134 ITEIFRAYIKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAGARKSYNKMFVAYLRTFARMGLK-- 211 (458)
T ss_dssp HHHHHHHHCCBGGGCSEEEEEEEEEECCCSSCBTGGGBCSEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHTTTCC--
T ss_pred HHHHHHHHHhhccccCeeeEEecCEeeCCCCCCCCcccccceEEeEEEEEECCHHHHHHHHHHHHHHHHHHHHHcCCc--
Confidence 9999998766 346799999999999999 78754 56799999999999888999998755 99999999995
Q ss_pred eEEEeCcHHHHHHHHHHc-----CCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 000993 882 CDIHLNHGDLLEAIWSWA-----GIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGL 956 (1196)
Q Consensus 882 ~~i~Lg~~~i~~~~l~~l-----gl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~ 956 (1196)
+.+.+|+++.+.+.+... ...++.. ..+......+ .. . ++ ..+.+ .+..++
T Consensus 212 ~~~~~~~~g~~gg~~s~e~~~l~~~ged~i-~~~~~~~~~n-~~------~----------~~-~~~~~----~l~~~l- 267 (458)
T 2i4l_A 212 AIPMRAETGPIGGDLSHEFIVLAETGESGV-YIDRDVLNLP-VP------D----------EN-VDYDG----DLTPII- 267 (458)
T ss_dssp EEEEECCCCSSCSSCEEEEEEECTTCSEEE-EEEGGGGGCC-CC------C----------TT-CCTTS----CCHHHH-
T ss_pred eEEEEccccccCCccchhhhhhhhcCcceE-EecccccccC-HH------H----------Hh-ccccH----hHHHHH-
Confidence 999999987654433210 1110000 0000000000 00 0 00 00000 000111
Q ss_pred HhcCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcccccccccccc
Q 000993 957 RFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAV 1036 (1196)
Q Consensus 957 ~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~ 1036 (1196)
+.+..+...++.. .+.+ ..+ + ..+.+|++++||++ ||.+|++ +.. .+++.
T Consensus 268 ----------~~~~~~~~~~~~~--~~g~-~~~--~--~~~~~~l~~~rgl~--~G~iFel---g~~--------~s~~~ 317 (458)
T 2i4l_A 268 ----------KQWTSVYAATEDV--HEPA-RYE--S--EVPEANRLNTRGIE--VGQIFYF---GTK--------YSDSM 317 (458)
T ss_dssp ----------HHHHHSCEEETTT--CCTT-HHH--H--HSCTTTEEEEEEEE--EEEEEEE---ETH--------HHHHT
T ss_pred ----------hcCchhhhcChhh--cccc-ccc--C--CCCCcCceeeeeec--cCcEEEe---ccc--------ccccC
Confidence 1110000000000 0000 000 0 13456889999999 9999998 222 37999
Q ss_pred ccccchhhhhccccccccccCCCCCCC--cceecccHHHHHhhccC------CCCCCCCCCCceEEEEEcC--CCchHHH
Q 000993 1037 GGRYDYLLHRMWDREYVGYASRTNPPS--GVGASLALETIIQHYPV------DFKPVRNEAGTSVLVCSRG--GGGLLVE 1106 (1196)
Q Consensus 1037 GGRYD~L~~~fg~~~~~~~~g~~~~~p--AvGfaiglerl~~~L~~------~~~~~~~~~~~~vlv~~~~--~~~~~~~ 1106 (1196)
||||++. +|. ..| ++||+||+|||+.+|.+ +...+...+|.+|+|++.+ ++....+
T Consensus 318 g~ry~~~---~G~-----------~~p~~~~gfgiGveRli~al~e~~~d~~g~~~p~~~ap~~v~vi~~~~~~~~~~~~ 383 (458)
T 2i4l_A 318 KANVTGP---DGT-----------DAPIHGGSYGVGVSRLLGAIIEACHDDNGIIWPEAVAPFRVTILNLKQGDAATDAA 383 (458)
T ss_dssp TCEEECT---TSC-----------EEECEEEEEEEEHHHHHHHHHHHSEETTEECCCTTTCSCSEEEEESSTTCHHHHHH
T ss_pred CcEEECC---CCC-----------EeceEEeeecccHHHHHHHHHHhhccccCCcCCcccCCceEEEEecCCCCHHHHHH
Confidence 9999875 221 235 88999999999988642 2222223357789999874 2456788
Q ss_pred HHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHH
Q 000993 1107 RMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFL 1181 (1196)
Q Consensus 1107 a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l 1181 (1196)
|.+++++||++|++|++++. +.++++++++|++.|+|++|+||++|+++|+|+||++.+++|..++++++++.|
T Consensus 384 a~~l~~~Lr~~Gi~v~~D~~-~~~~g~k~~~ad~~g~p~~iivG~~e~~~g~v~vr~r~~~~~~~v~~~~l~~~l 457 (458)
T 2i4l_A 384 CDQLYRELSAKGVDVLYDDT-DQRAGAKFATADLIGIPWQIHVGPRGLAEGKVELKRRSDGARENLALADVVARL 457 (458)
T ss_dssp HHHHHHHHHHTTCCEEEECS-SCCHHHHHHHHHHHTCSEEEEECHHHHTTTEEEEEETTTCCEEEEETTTTTCC-
T ss_pred HHHHHHHHhhCCCEEEEECC-CCCHHHHHHHHHhcCCCEEEEECCchhhCCEEEEEECCCCcEEEEeHHHHHHhh
Confidence 99999999999999998876 579999999999999999999999999999999999999999999999987654
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=360.30 Aligned_cols=260 Identities=23% Similarity=0.368 Sum_probs=208.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC--CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
..++|++.+.||+|+||.||+|.+..+++.||+|+++.... .......+.+|+.+++.++||||+++++++...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---- 78 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNE---- 78 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC----
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcC----
Confidence 45789999999999999999999999999999999975321 123456799999999999999999999987431
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES--YDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~--~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+|+|||||+++|.+++.. ...+++..++.++.||+.||+|
T Consensus 79 ----------------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~ 124 (305)
T 2wtk_C 79 ----------------------------------EKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEY 124 (305)
T ss_dssp -------------------------------------CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHH
Confidence 2346799999999888888865 4569999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC-CCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP-KID 613 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~s 613 (1196)
||++||+||||||+|||++.++.+||+|||++........ ........||+.|+|||++.+.. .++
T Consensus 125 LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~~~~~~~ 191 (305)
T 2wtk_C 125 LHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAA-------------DDTCRTSQGSPAFQPPEIANGLDTFSG 191 (305)
T ss_dssp HHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCS-------------SCEECCCCSCGGGCCHHHHTCCSCEES
T ss_pred HHHCCeeecCCCcccEEEcCCCcEEeeccccccccCcccc-------------ccccccCCCCCCCcChhhccCcccCCc
Confidence 9999999999999999999999999999999976432110 01123457999999999998632 247
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
.++|||||||++|||++ ||...................+ ...++.+.+||++||+.||.+|||+.++++|+|+.
T Consensus 192 ~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~ 268 (305)
T 2wtk_C 192 FKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIP---GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFR 268 (305)
T ss_dssp HHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCC---SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHH
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCCC---CccCHHHHHHHHHHccCChhhCCCHHHHhcCcccc
Confidence 79999999999999996 8876555444433333222222 34567899999999999999999999999999886
Q ss_pred Cc
Q 000993 691 QM 692 (1196)
Q Consensus 691 ~~ 692 (1196)
..
T Consensus 269 ~~ 270 (305)
T 2wtk_C 269 KK 270 (305)
T ss_dssp SC
T ss_pred cC
Confidence 54
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-38 Score=369.23 Aligned_cols=250 Identities=23% Similarity=0.354 Sum_probs=202.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-------cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeee
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK-------LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFE 451 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~-------~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e 451 (1196)
.++|++.+.||+|+||.||+|++. .++..||||+++.. ........+.+|+.+|+.+ +||||++++++|.+
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT-CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC-cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 478999999999999999999985 34568999998643 3334567899999999999 89999999998732
Q ss_pred cCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----------------
Q 000993 452 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---------------- 514 (1196)
Q Consensus 452 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---------------- 514 (1196)
...+|+|||||+ |+|.+++....
T Consensus 159 ----------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~ 198 (370)
T 2psq_A 159 ----------------------------------------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 198 (370)
T ss_dssp ----------------------------------------SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCC
T ss_pred ----------------------------------------CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccc
Confidence 345799999997 59999997643
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCc
Q 000993 515 HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 594 (1196)
Q Consensus 515 ~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (1196)
.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... .......
T Consensus 199 ~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-------------~~~~~~~ 265 (370)
T 2psq_A 199 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY-------------YKKTTNG 265 (370)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCT-------------TCTTTTT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCcccCcccc-------------eecccCC
Confidence 478999999999999999999999999999999999999999999999999986532210 0112345
Q ss_pred cccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 000993 595 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 670 (1196)
Q Consensus 595 ~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL 670 (1196)
.+|+.|+|||++.+ ..|+.++|||||||++|||++ ||......+.... +. ....++.....++++.+||.+||
T Consensus 266 ~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~li~~~l 342 (370)
T 2psq_A 266 RLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL-LK-EGHRMDKPANCTNELYMMMRDCW 342 (370)
T ss_dssp TSCGGGCCHHHHHT-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH-HH-TTCCCCCCTTSCHHHHHHHHHHT
T ss_pred CcccceECHhHhcC-CCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-Hh-cCCCCCCCCCCCHHHHHHHHHHc
Confidence 68899999999987 569999999999999999986 6765443333322 22 22333344456789999999999
Q ss_pred cCCCCCCCCHHHHHhc
Q 000993 671 SPSPSDRPSATELLQD 686 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~ 686 (1196)
+.||.+|||+.+++++
T Consensus 343 ~~dP~~Rpt~~ell~~ 358 (370)
T 2psq_A 343 HAVPSQRPTFKQLVED 358 (370)
T ss_dssp CSSGGGSCCHHHHHHH
T ss_pred CCChhhCcCHHHHHHH
Confidence 9999999999999975
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=369.23 Aligned_cols=265 Identities=22% Similarity=0.413 Sum_probs=213.9
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc---------------hhHHHHHHHHHHHHhcCCCC
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL---------------PVNDRILREVATLSRLQHQH 441 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~---------------~~~~~~~~Ev~iL~~L~Hpn 441 (1196)
..+.++|++.+.||+|+||.||+|++ +|+.||||++....... .....+.+|+.+++.++|||
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 104 (348)
T 2pml_X 27 DKYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEY 104 (348)
T ss_dssp CEEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTT
T ss_pred ccccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCC
Confidence 44568999999999999999999999 89999999997532111 11267999999999999999
Q ss_pred eeeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHH------Hhh--
Q 000993 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQV------FES-- 512 (1196)
Q Consensus 442 IV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~------l~~-- 512 (1196)
|+++++++.+ ...+|+|||||++ +|.++ +..
T Consensus 105 i~~~~~~~~~----------------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~ 144 (348)
T 2pml_X 105 CLTCEGIITN----------------------------------------YDEVYIIYEYMENDSILKFDEYFFVLDKNY 144 (348)
T ss_dssp BCCCSEEEES----------------------------------------SSEEEEEEECCTTCBSSEESSSEESSCSSS
T ss_pred cceEEEEEee----------------------------------------CCeEEEEEeccCCCcHHHHHHHhhhhhhcc
Confidence 9999998732 3568999999975 99988 655
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccC
Q 000993 513 YDHFDKELAWHLFRQIVEGLAHIHG-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG 591 (1196)
Q Consensus 513 ~~~l~e~~~~~i~~qIa~gL~yLHs-~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (1196)
...+++..++.++.||+.||+|||+ +||+||||||+|||++.++.+||+|||+++..... ..
T Consensus 145 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~-----------------~~ 207 (348)
T 2pml_X 145 TCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK-----------------KI 207 (348)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTT-----------------EE
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCCcEEEeccccccccccc-----------------cc
Confidence 5679999999999999999999999 99999999999999999999999999999764321 12
Q ss_pred cCccccccCCCchhccCCCCCCC-cchhHHHHHHHHHhhc---CCchhHH-HHHHHHHhhhcCCCCCc------------
Q 000993 592 TGQVGTYFYTAPEIEQGWPKIDE-KADMYSLGIVFFELWH---PFSTAME-RQIVLSDLKQKGELPPS------------ 654 (1196)
Q Consensus 592 ~~~~GT~~Y~APE~l~~~~~~s~-ksDVwSlGviLyELlt---Pf~~~~~-~~~~~~~l~~~~~~p~~------------ 654 (1196)
....||+.|+|||++.+...++. ++|||||||++|||++ ||..... .+............|..
T Consensus 208 ~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 287 (348)
T 2pml_X 208 KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKK 287 (348)
T ss_dssp CSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--
T ss_pred cCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccc
Confidence 34579999999999988545666 9999999999999996 7776544 33333332222223311
Q ss_pred ----cccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchHHHHHHH
Q 000993 655 ----WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNI 700 (1196)
Q Consensus 655 ----~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~~~~~~~ 700 (1196)
....++++.+||++||+.||.+|||+.++++|+||.......+...
T Consensus 288 ~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~~~~~~~~ 337 (348)
T 2pml_X 288 STCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIEDLREF 337 (348)
T ss_dssp ------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCCHHHHHHH
T ss_pred cccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCCHHHHHHH
Confidence 1446778999999999999999999999999999999876655443
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-38 Score=370.16 Aligned_cols=251 Identities=21% Similarity=0.285 Sum_probs=202.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEE-----ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKN-----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~-----~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.++|++.+.||+|+||+||+|++ ..+++.||||+++. ........++.+|+.+++.++|||||++++++.+
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~--- 145 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ--- 145 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCS-SCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccc-ccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec---
Confidence 47899999999999999999994 45678999999863 3344555678999999999999999999998732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-------CCCHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-------HFDKELAWHLFR 526 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-------~l~e~~~~~i~~ 526 (1196)
....|+|||||+ |+|.+++.... .+++..++.++.
T Consensus 146 -------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~ 188 (367)
T 3l9p_A 146 -------------------------------------SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 188 (367)
T ss_dssp -------------------------------------SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHH
T ss_pred -------------------------------------CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHH
Confidence 234589999996 59999997643 489999999999
Q ss_pred HHHHHHHHHHhCCCcccCCCcCcEEecCCC---CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCc
Q 000993 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 603 (1196)
Q Consensus 527 qIa~gL~yLHs~gIiHrDLKp~NILld~~~---~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 603 (1196)
||+.||+|||++||+||||||+|||++.++ .+||+|||+|+........ .......||+.|+||
T Consensus 189 qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~-------------~~~~~~~~t~~y~aP 255 (367)
T 3l9p_A 189 DIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY-------------RKGGCAMLPVKWMPP 255 (367)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSC-------------TTCCGGGSCGGGCCH
T ss_pred HHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCcccccccccccc-------------ccCCCcCCcccEECH
Confidence 999999999999999999999999999655 4999999999865432211 112345789999999
Q ss_pred hhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC
Q 000993 604 EIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 679 (1196)
Q Consensus 604 E~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt 679 (1196)
|++.+ ..++.++|||||||++|||++ ||......+....... ...++.....++.+.+||.+||+.||.+|||
T Consensus 256 E~~~~-~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps 332 (367)
T 3l9p_A 256 EAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS--GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 332 (367)
T ss_dssp HHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT--TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HHhcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc--CCCCCCCccCCHHHHHHHHHHcCCCHhHCcC
Confidence 99987 569999999999999999985 7766655544433332 2223333456778999999999999999999
Q ss_pred HHHHHhcc
Q 000993 680 ATELLQDA 687 (1196)
Q Consensus 680 a~eiL~~~ 687 (1196)
+.+++++.
T Consensus 333 ~~eil~~l 340 (367)
T 3l9p_A 333 FAIILERI 340 (367)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999875
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-38 Score=359.32 Aligned_cols=259 Identities=25% Similarity=0.373 Sum_probs=204.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC--CCCeeeeeeeeeecCcccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ--HQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~--HpnIV~l~~~~~e~~~~~~ 457 (1196)
.++|++.+.||+|+||.||+|.+. +++.||||++............+.+|+.+++.++ ||||+++++++..
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~------ 99 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT------ 99 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC------
T ss_pred cceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec------
Confidence 357999999999999999999986 6899999999876666666778999999999997 5999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|++||+++++|.+++.....+++..++.++.||+.||+|||+
T Consensus 100 ----------------------------------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~ 145 (313)
T 3cek_A 100 ----------------------------------DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 145 (313)
T ss_dssp ----------------------------------SSEEEEEECCCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3468999998788999999988899999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC--------
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-------- 609 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-------- 609 (1196)
+||+||||||+|||++ ++.+||+|||+++....... ........||+.|+|||++.+.
T Consensus 146 ~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 211 (313)
T 3cek_A 146 HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT-------------SVVKDSQVGTVNYMPPEAIKDMSSSRENGK 211 (313)
T ss_dssp TTCCCCCCCGGGEEEE-TTEEEECCCSSSCC---------------------------CCGGGCCHHHHTTCC-------
T ss_pred CCceecCCCcccEEEE-CCeEEEeeccccccccCccc-------------cccccCCCCCCCcCCHHHHhhccccccccc
Confidence 9999999999999996 48999999999986532210 0112345799999999998752
Q ss_pred --CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHH
Q 000993 610 --PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 684 (1196)
Q Consensus 610 --~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL 684 (1196)
..++.++|||||||++|||++ ||..........................++++.+||++||+.||.+|||+.+++
T Consensus 212 ~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell 291 (313)
T 3cek_A 212 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291 (313)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred ccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHh
Confidence 357889999999999999996 776543332222222222222222233457899999999999999999999999
Q ss_pred hccCCCCch
Q 000993 685 QDALPPQME 693 (1196)
Q Consensus 685 ~~~~~~~~~ 693 (1196)
+|+|+....
T Consensus 292 ~h~~~~~~~ 300 (313)
T 3cek_A 292 AHPYVQIQT 300 (313)
T ss_dssp TSHHHHCC-
T ss_pred cCccccCCC
Confidence 999987643
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-38 Score=348.40 Aligned_cols=245 Identities=22% Similarity=0.380 Sum_probs=202.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||+|+||.||+|++. +++.||+|++...... .+++.+|+.+++.++||||+++++++.+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~--------- 76 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLE--------- 76 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECS---------
T ss_pred hhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccC---HHHHHHHHHHHHhCCCCCEeeEEEEEec---------
Confidence 68999999999999999999997 6788999999754332 4678999999999999999999998732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+|||||+ ++|.+++... ..+++..++.++.||+.||+|||++
T Consensus 77 -------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~ 125 (269)
T 4hcu_A 77 -------------------------------QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 125 (269)
T ss_dssp -------------------------------SSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -------------------------------CCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC
Confidence 345799999997 5899999654 4699999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+||+++.++.+||+|||+++....... .......+|+.|+|||++.+ ..++.++||
T Consensus 126 ~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di 190 (269)
T 4hcu_A 126 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY--------------TSSTGTKFPVKWASPEVFSF-SRYSSKSDV 190 (269)
T ss_dssp TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH--------------HSTTSTTCCGGGCCHHHHHH-CCCCHHHHH
T ss_pred CeecCCcchheEEEcCCCCEEecccccccccccccc--------------ccccCcccccccCCHHHhcC-CCCCchhhh
Confidence 999999999999999999999999999986543221 11234467889999999987 568999999
Q ss_pred HHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 619 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 619 wSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||||+++|+|++ ||......+........ ..+......++.+.++|.+||+.||.+|||+.+++++
T Consensus 191 ~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 260 (269)
T 4hcu_A 191 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG--FRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 260 (269)
T ss_dssp HHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT--CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcC--ccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 999999999986 77765555444433322 2222333457789999999999999999999999986
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-38 Score=357.85 Aligned_cols=257 Identities=24% Similarity=0.391 Sum_probs=191.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|++++.||+|+||.||+|+++.+|+.||||++..........+.+.++..+++.++||||+++++++.+
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~-------- 95 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFIT-------- 95 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC--------
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEec--------
Confidence 579999999999999999999999999999999998654433333445555567888899999999998743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+||||+++.+..+... ...+++..++.++.||+.||+|||++
T Consensus 96 --------------------------------~~~~~lv~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 143 (318)
T 2dyl_A 96 --------------------------------NTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK 143 (318)
T ss_dssp --------------------------------SSEEEEEECCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCcEEEEEeccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 346899999997666666654 56799999999999999999999995
Q ss_pred -CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC----CCCCC
Q 000993 539 -GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKID 613 (1196)
Q Consensus 539 -gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~s 613 (1196)
||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.+ ...++
T Consensus 144 ~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~ 207 (318)
T 2dyl_A 144 HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK----------------AKDRSAGCAAYMAPERIDPPDPTKPDYD 207 (318)
T ss_dssp HCCCCCCCCGGGEEECTTSCEEECCCTTC------------------------------CCTTCCHHHHC--------CC
T ss_pred CCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc----------------cccccCCCccccChhhcccccccccCCc
Confidence 99999999999999999999999999997643211 1123479999999999852 24588
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHH-HHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAME-RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~-~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
.++|||||||++|||++ ||..... ...............+.....++++.+||.+||+.||.+|||+.++++|+|+
T Consensus 208 ~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~ 287 (318)
T 2dyl_A 208 IRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFI 287 (318)
T ss_dssp THHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHH
T ss_pred cccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHH
Confidence 99999999999999996 7765332 2333333333333333344567899999999999999999999999999998
Q ss_pred CCc
Q 000993 690 PQM 692 (1196)
Q Consensus 690 ~~~ 692 (1196)
.+.
T Consensus 288 ~~~ 290 (318)
T 2dyl_A 288 KRY 290 (318)
T ss_dssp HHH
T ss_pred Hhc
Confidence 654
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-38 Score=353.01 Aligned_cols=257 Identities=26% Similarity=0.364 Sum_probs=202.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|.....||+|+||.||+|++..+++.||||++.... ....+.+.+|+.+++.++||||++++++|.+
T Consensus 21 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------- 90 (295)
T 2clq_A 21 YDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD--SRYSQPLHEEIALHKHLKHKNIVQYLGSFSE-------- 90 (295)
T ss_dssp BCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC--C---HHHHHHHHHHHTCCCTTBCCEEEEEEE--------
T ss_pred ccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc--hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEe--------
Confidence 355666678999999999999999999999999987543 2345678999999999999999999998743
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---HFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|+|||||+ ++|.+++.... .+++..++.++.||+.||+||
T Consensus 91 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~l 138 (295)
T 2clq_A 91 --------------------------------NGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYL 138 (295)
T ss_dssp --------------------------------TTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHH
Confidence 346799999996 59999987652 467899999999999999999
Q ss_pred HhCCCcccCCCcCcEEecC-CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC-CCCC
Q 000993 536 HGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKID 613 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~s 613 (1196)
|++||+||||||+||+++. ++.+||+|||+++...... .......||+.|+|||++.+. ..++
T Consensus 139 H~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~ 203 (295)
T 2clq_A 139 HDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN---------------PCTETFTGTLQYMAPEIIDKGPRGYG 203 (295)
T ss_dssp HHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--------------------CCCCCCGGGCCHHHHHHGGGGCS
T ss_pred HhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC---------------CcccccCCCccccChhhhcCCCCCCC
Confidence 9999999999999999987 8999999999997643211 012345799999999998753 2378
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
.++||||||+++|+|++ ||...................+......++++.+||.+||+.||.+|||+.++++|+|+.
T Consensus 204 ~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~ 283 (295)
T 2clq_A 204 KAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK 283 (295)
T ss_dssp HHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGC
T ss_pred cHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhh
Confidence 99999999999999996 776543322222221112223333345678999999999999999999999999999998
Q ss_pred Cch
Q 000993 691 QME 693 (1196)
Q Consensus 691 ~~~ 693 (1196)
...
T Consensus 284 ~~~ 286 (295)
T 2clq_A 284 VSS 286 (295)
T ss_dssp C--
T ss_pred hcc
Confidence 653
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-38 Score=347.80 Aligned_cols=246 Identities=25% Similarity=0.392 Sum_probs=202.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|.++ ++..||+|+++..... ...+.+|+.+++.++||||+++++++.+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------- 74 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMS---EDEFFQEAQTMMKLSHPKLVKFYGVCSK-------- 74 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBC---HHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCc---HHHHHHHHHHHHhCCCCCEeeEEEEEcc--------
Confidence 478999999999999999999887 6778999999754332 4578999999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+|||||+ ++|.+++.... .+++..++.++.||+.||+|||+
T Consensus 75 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 122 (268)
T 3sxs_A 75 --------------------------------EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLES 122 (268)
T ss_dssp --------------------------------SSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 345799999996 58999997654 59999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+||+++.++.+||+|||+++...... ........+|+.|+|||++.+ ..++.++|
T Consensus 123 ~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~D 187 (268)
T 3sxs_A 123 HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ--------------YVSSVGTKFPVKWSAPEVFHY-FKYSSKSD 187 (268)
T ss_dssp TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC--------------EEECCSCCCCGGGCCHHHHHH-SEEETTHH
T ss_pred CCeecCCcCcceEEECCCCCEEEccCccceecchhh--------------hhcccCCCcCcccCCHHHHhc-cCCchhhh
Confidence 999999999999999999999999999998643221 111234567889999999987 56899999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 618 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 618 VwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||||+++|+|++ ||................ .+......++.+.++|.+||+.||.+|||+.+++++
T Consensus 188 i~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 258 (268)
T 3sxs_A 188 VWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGH--RLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSS 258 (268)
T ss_dssp HHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC--CCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred hHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCC--CCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999996 777666555544443322 222223456789999999999999999999999986
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-38 Score=360.59 Aligned_cols=266 Identities=18% Similarity=0.249 Sum_probs=187.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
.++|++.+.||+|+||.||+|++..++. .||||+++.........+.+.+|+.+++.++||||+++++++.....
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-- 99 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA-- 99 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc--
Confidence 3689999999999999999999887765 89999997655455567789999999999999999999998854310
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcC------CCCHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD------HFDKELAWHLFRQIV 529 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~------~l~e~~~~~i~~qIa 529 (1196)
.......|++||||.+ +|.+++.... .+++..++.++.||+
T Consensus 100 --------------------------------~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~ 147 (323)
T 3qup_A 100 --------------------------------KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIA 147 (323)
T ss_dssp -------------------------------------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHH
T ss_pred --------------------------------ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHH
Confidence 0112345899999975 9999886432 599999999999999
Q ss_pred HHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 530 EGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 530 ~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
.||+|||++||+||||||+|||++.++.+||+|||+++....... ........+|+.|+|||++.+
T Consensus 148 ~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~- 213 (323)
T 3qup_A 148 CGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY-------------YRQGCASKLPVKWLALESLAD- 213 (323)
T ss_dssp HHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------------------------------CCGGGCCHHHHHH-
T ss_pred HHHHHHHcCCcccCCCCcceEEEcCCCCEEEeecccccccccccc-------------ccccccccCcccccCchhhcC-
Confidence 999999999999999999999999999999999999986533211 111234467889999999988
Q ss_pred CCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC------
Q 000993 610 PKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS------ 679 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt------ 679 (1196)
..++.++|||||||++|||++ ||......+....... ...++.....++++.+||.+||+.||.+|||
T Consensus 214 ~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 291 (323)
T 3qup_A 214 NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIG--GNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRM 291 (323)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT--TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred CCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhc--CCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 568999999999999999986 6765544444333322 2233334456789999999999999999999
Q ss_pred -HHHHHhccCCCCchHH
Q 000993 680 -ATELLQDALPPQMEYE 695 (1196)
Q Consensus 680 -a~eiL~~~~~~~~~~~ 695 (1196)
++++++|+|+.....+
T Consensus 292 ~l~~~l~~~~~~~~~~~ 308 (323)
T 3qup_A 292 ELENILGHLSVLSTSQD 308 (323)
T ss_dssp HHHHHHHC---------
T ss_pred HHHHHHHHhhhcCCCCC
Confidence 5555667766655433
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-38 Score=362.04 Aligned_cols=253 Identities=20% Similarity=0.256 Sum_probs=201.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
-++|++.+.||+|+||.||+|++..+|+.||||++...... ..+.+|+.+++.+ +||||+++++++..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~E~~~l~~l~~h~~i~~~~~~~~~------- 76 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA----PQLHLEYRFYKQLGSGDGIPQVYYFGPC------- 76 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS----CCHHHHHHHHHHHCSCTTSCCEEEEEEE-------
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch----HHHHHHHHHHHHhhCCCCCCEEEEEEec-------
Confidence 46899999999999999999999999999999998754332 3578899999999 99999999988732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....|+|||||+++|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 77 ---------------------------------~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~ 123 (330)
T 2izr_A 77 ---------------------------------GKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHS 123 (330)
T ss_dssp ---------------------------------TTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCccEEEEEeCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 356899999998899999986 4679999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCC-----eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 538 QGIIHRDLTPNNIFFDARND-----IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~-----vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+||+||||||+|||++.++. +||+|||+++.+......... ........+||+.|+|||++.+ ..+
T Consensus 124 ~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~--------~~~~~~~~~gt~~y~aPE~~~~-~~~ 194 (330)
T 2izr_A 124 KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHI--------PYREHKSLTGTARYMSINTHLG-KEQ 194 (330)
T ss_dssp TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBC--------CCCCCCCCCSCTTTCCHHHHTT-CCC
T ss_pred CCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccc--------cccccCCcCCCccccChHHHcC-CCC
Confidence 99999999999999998887 999999999865432211100 0112345689999999999998 568
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhH---HHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAM---ERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~---~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
+.++|||||||++|||++ ||.... ..+............+. ......+++.++|.+||+.||.+||++.+|++
T Consensus 195 ~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~ 274 (330)
T 2izr_A 195 SRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRK 274 (330)
T ss_dssp CHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred CchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 999999999999999996 886532 22222222111112221 22233458999999999999999999999986
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-38 Score=360.08 Aligned_cols=250 Identities=20% Similarity=0.309 Sum_probs=204.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.++|++.+.||+|+||.||+|++. .+++.||||+++.. ........+.+|+.+++.++||||++++++|.+
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 121 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE-ASADMQADFQREAALMAEFDNPNIVKLLGVCAV--- 121 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS---
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccc-cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc---
Confidence 478999999999999999999997 35589999998743 334456789999999999999999999998732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc--------------------
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-------------------- 513 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-------------------- 513 (1196)
...+|+|||||++ +|.+++...
T Consensus 122 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T 1luf_A 122 -------------------------------------GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS 164 (343)
T ss_dssp -------------------------------------SSSCEEEEECCTTCBHHHHHHHTCC------------------
T ss_pred -------------------------------------CCceEEEEecCCCCcHHHHHHHhCccccccccccccccccccc
Confidence 3456999999974 999999763
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccc
Q 000993 514 ----DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV 589 (1196)
Q Consensus 514 ----~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~ 589 (1196)
..+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++........ .
T Consensus 165 ~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-------------~ 231 (343)
T 1luf_A 165 SPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY-------------K 231 (343)
T ss_dssp ----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCB-------------C
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCcccccCccc-------------c
Confidence 56999999999999999999999999999999999999999999999999999876432210 1
Q ss_pred cCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHH
Q 000993 590 DGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESL 665 (1196)
Q Consensus 590 ~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~L 665 (1196)
......||+.|+|||++.+ ..++.++|||||||++|||++ ||......+...... ....++.....++.+.+|
T Consensus 232 ~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~l 308 (343)
T 1luf_A 232 ADGNDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVR--DGNILACPENCPLELYNL 308 (343)
T ss_dssp ----CCBCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH--TTCCCCCCTTCCHHHHHH
T ss_pred ccCCCcccceecChhhhcc-CCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHh--CCCcCCCCCCCCHHHHHH
Confidence 1234568999999999987 568999999999999999996 777665554443332 233333334567799999
Q ss_pred HHHcccCCCCCCCCHHHHHhc
Q 000993 666 LRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 666 I~~cL~~dP~~RPta~eiL~~ 686 (1196)
|++||+.||.+|||+.+++++
T Consensus 309 i~~~l~~~p~~Rps~~~~~~~ 329 (343)
T 1luf_A 309 MRLCWSKLPADRPSFCSIHRI 329 (343)
T ss_dssp HHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHcccCcccCCCHHHHHHH
Confidence 999999999999999999875
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=346.56 Aligned_cols=248 Identities=19% Similarity=0.243 Sum_probs=206.1
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
...++|++.+.||+|+||.||+|++. |+.||||++..........+.+.+|+.+++.++||||++++++|.+.
T Consensus 7 i~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 79 (271)
T 3kmu_A 7 IDFKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP----- 79 (271)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTT-----
T ss_pred CCHHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccC-----
Confidence 34579999999999999999999985 89999999987666666677899999999999999999999987431
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+|+|||||+ ++|.+++.... .+++..++.++.||+.||+|
T Consensus 80 ---------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~ 126 (271)
T 3kmu_A 80 ---------------------------------PAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAF 126 (271)
T ss_dssp ---------------------------------TSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHH
Confidence 1245799999997 59999998765 48999999999999999999
Q ss_pred HHhCC--CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC--
Q 000993 535 IHGQG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP-- 610 (1196)
Q Consensus 535 LHs~g--IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-- 610 (1196)
||++| |+||||||+|||++.++.++|+|||++... ......||+.|+|||++.+..
T Consensus 127 lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~--------------------~~~~~~~t~~y~aPE~~~~~~~~ 186 (271)
T 3kmu_A 127 LHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF--------------------QSPGRMYAPAWVAPEALQKKPED 186 (271)
T ss_dssp HTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT--------------------SCTTCBSCGGGSCHHHHHSCGGG
T ss_pred HhcCCCceecCCCccceEEEcCCcceeEEeccceeee--------------------cccCccCCccccChhhhccCCCC
Confidence 99999 999999999999999999999999887532 123457899999999998732
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++.++|||||||++|||++ ||.............. ....+......++.+.++|.+||+.||.+|||+.++++.
T Consensus 187 ~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 264 (271)
T 3kmu_A 187 TNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVAL-EGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPI 264 (271)
T ss_dssp SCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHH-SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 13338999999999999996 8876665555444433 333344445677899999999999999999999999864
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-37 Score=349.03 Aligned_cols=255 Identities=18% Similarity=0.211 Sum_probs=202.0
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~ 457 (1196)
..++|++.+.||+|+||.||+|++..+|+.||||++..... ...+.+|+.+++.+ +||||+++++++.
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~~~~l~~~~~i~~~~~~~~------- 76 (298)
T 1csn_A 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD----APQLRDEYRTYKLLAGCTGIPNVYYFGQ------- 76 (298)
T ss_dssp ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT----SCCHHHHHHHHHHTTTCTTCCCEEEEEE-------
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc----cHHHHHHHHHHHHHhcCCCCCeEEeecC-------
Confidence 34789999999999999999999999999999999874432 23477899999999 8999999998763
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
.....|+||||++++|.+++...+ .+++..++.++.||+.||+|||
T Consensus 77 ---------------------------------~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH 123 (298)
T 1csn_A 77 ---------------------------------EGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH 123 (298)
T ss_dssp ---------------------------------ETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCceeEEEEEecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH
Confidence 245679999999889999998654 5999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCC-----eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 537 GQGIIHRDLTPNNIFFDARND-----IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~-----vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
++||+||||||+|||++.++. +||+|||+++............ ........||+.|+|||++.+ ..
T Consensus 124 ~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~~-~~ 194 (298)
T 1csn_A 124 EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIP--------YREKKNLSGTARYMSINTHLG-RE 194 (298)
T ss_dssp TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCC--------CCCCCCCCSCTTTCCHHHHTT-CC
T ss_pred hCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccccccccc--------ccCccCCCCCcccCCchhhcC-CC
Confidence 999999999999999988776 9999999998764332111000 012345689999999999988 56
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhH---HHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHH
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAM---ERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 683 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~---~~~~~~~~l~~~--~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ei 683 (1196)
++.++|||||||++|||++ ||.... ............ ...+......++++.+||.+||+.||.+|||+.++
T Consensus 195 ~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l 274 (298)
T 1csn_A 195 QSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYL 274 (298)
T ss_dssp CCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHH
T ss_pred CChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHH
Confidence 8999999999999999997 776521 222222111111 11112223567799999999999999999999999
Q ss_pred Hhc
Q 000993 684 LQD 686 (1196)
Q Consensus 684 L~~ 686 (1196)
++.
T Consensus 275 ~~~ 277 (298)
T 1csn_A 275 QGL 277 (298)
T ss_dssp HHH
T ss_pred HHH
Confidence 864
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=348.43 Aligned_cols=246 Identities=20% Similarity=0.355 Sum_probs=200.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++++.||+|+||.||+|.+. ++..||||++...... .+++.+|+.+++.++||||++++++|.+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------- 90 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVCTK-------- 90 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECS--------
T ss_pred HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCC---HHHHHHHHHHHhcCCCCCEeeEEEEEec--------
Confidence 478999999999999999999887 7788999999754332 4678999999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+|||||+ ++|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 91 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 138 (283)
T 3gen_A 91 --------------------------------QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 138 (283)
T ss_dssp --------------------------------SSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 345799999996 599999976 5679999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++.+||+|||+++........ ......+|+.|+|||++.+ ..++.++|
T Consensus 139 ~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--------------~~~~~~~~~~y~aPE~~~~-~~~~~~~D 203 (283)
T 3gen_A 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT--------------SSVGSKFPVRWSPPEVLMY-SKFSSKSD 203 (283)
T ss_dssp TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHH--------------STTSTTSCGGGCCHHHHHH-CCCSHHHH
T ss_pred CCccCCCCccceEEEcCCCCEEEccccccccccccccc--------------cccCCccCcccCCHHHhcc-CCCCchhh
Confidence 99999999999999999999999999999865432211 1233467889999999987 56899999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 618 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 618 VwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||||+++|+|++ ||............... ..+......++.+.+||.+||+.||.+|||+.+++++
T Consensus 204 v~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 274 (283)
T 3gen_A 204 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG--LRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN 274 (283)
T ss_dssp HHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT--CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCccccChhHHHHHHhcc--cCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 9999999999986 77766555444433322 2222233456789999999999999999999999986
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-38 Score=366.73 Aligned_cols=255 Identities=23% Similarity=0.347 Sum_probs=201.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-----------CCCeeeeeee
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-----------HQHVVRYYQA 448 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-----------HpnIV~l~~~ 448 (1196)
.++|++.+.||+|+||+||+|++..+|+.||||++.. .......+.+|+.+++.++ ||||++++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~ 94 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG---DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC---CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence 4689999999999999999999999999999999863 3334567889999999886 8999999998
Q ss_pred eeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc--CCCCHHHHHHHHH
Q 000993 449 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFR 526 (1196)
Q Consensus 449 ~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~ 526 (1196)
+...+ .....++++|||++++|.+++... ..+++..++.++.
T Consensus 95 ~~~~~------------------------------------~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~ 138 (373)
T 1q8y_A 95 FNHKG------------------------------------PNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISK 138 (373)
T ss_dssp EEEEE------------------------------------TTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHH
T ss_pred hhccC------------------------------------CCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHH
Confidence 75421 123478999999988999999764 4599999999999
Q ss_pred HHHHHHHHHHhC-CCcccCCCcCcEEecC------CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcccccc
Q 000993 527 QIVEGLAHIHGQ-GIIHRDLTPNNIFFDA------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 599 (1196)
Q Consensus 527 qIa~gL~yLHs~-gIiHrDLKp~NILld~------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 599 (1196)
||+.||+|||++ ||+||||||+|||++. .+.+||+|||+++..... .....||+.
T Consensus 139 qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~------------------~~~~~~t~~ 200 (373)
T 1q8y_A 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH------------------YTNSIQTRE 200 (373)
T ss_dssp HHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC------------------CCSCCSCGG
T ss_pred HHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCC------------------CCCCCCCcc
Confidence 999999999998 9999999999999953 347999999999764311 234578999
Q ss_pred CCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHH------HHHHHHHhhhcCCCCCc----------------
Q 000993 600 YTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAME------RQIVLSDLKQKGELPPS---------------- 654 (1196)
Q Consensus 600 Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~------~~~~~~~l~~~~~~p~~---------------- 654 (1196)
|+|||++.+ ..++.++|||||||++|||++ ||..... ...........+..|+.
T Consensus 201 y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 279 (373)
T 1q8y_A 201 YRSPEVLLG-APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRG 279 (373)
T ss_dssp GCCHHHHHT-CCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--
T ss_pred ccCcHHHhC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcc
Confidence 999999988 568999999999999999997 7764331 11111111111111110
Q ss_pred -----------------------cccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 655 -----------------------WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 655 -----------------------~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
....++++.+||++||+.||.+|||+.++|+|+||.+.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 340 (373)
T 1q8y_A 280 LLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT 340 (373)
T ss_dssp CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred hhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhcc
Confidence 01223577899999999999999999999999999875
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-38 Score=370.20 Aligned_cols=250 Identities=22% Similarity=0.327 Sum_probs=203.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|.+.+.||+|+||.||+|+++.+++.||||+++.. ........+.+|+.+|+.++||||+++++++..
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------- 183 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-------- 183 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT-SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECS--------
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEec--------
Confidence 36899999999999999999999999999999998643 333445578899999999999999999998732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+|||||+ ++|.+++...+ .+++..++.++.||+.||+|||+
T Consensus 184 --------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~ 231 (377)
T 3cbl_A 184 --------------------------------KQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES 231 (377)
T ss_dssp --------------------------------SSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 234699999996 69999997654 69999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++.+||+|||+++....... ........+|+.|+|||++.+ ..++.++|
T Consensus 232 ~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~D 297 (377)
T 3cbl_A 232 KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY-------------AASGGLRQVPVKWTAPEALNY-GRYSSESD 297 (377)
T ss_dssp TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE-------------ECCSSCCEEEGGGSCHHHHHH-CEEEHHHH
T ss_pred CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce-------------eecCCCCCCCcCcCCHhHhcc-CCCCchhh
Confidence 9999999999999999999999999999975422110 011122356788999999987 56899999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 618 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 618 VwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||||||++|||++ ||......+.... +. ....++.....++++.+||.+||+.||.+|||+.++++.
T Consensus 298 vwslG~il~el~t~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~ 368 (377)
T 3cbl_A 298 VWSFGILLWETFSLGASPYPNLSNQQTREF-VE-KGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQE 368 (377)
T ss_dssp HHHHHHHHHHHHTTSCCSSTTSCHHHHHHH-HH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HH-cCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 9999999999996 7766555443322 22 223333334567799999999999999999999999864
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=350.81 Aligned_cols=254 Identities=24% Similarity=0.397 Sum_probs=200.2
Q ss_pred cCCceEEeeeccCCcEEEEEEE----EccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCK----NKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~----~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.+.|++.+.||+|+||.||+|+ +..+++.||||++.... .......+.+|+.+++.++||||++++++|.+.
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--- 95 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTED--- 95 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC----
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC---
Confidence 3569999999999999999999 46689999999987543 223456789999999999999999999988432
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh-cCCCCHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
....+|+|||||++ +|.+++.. ...+++..++.++.||+.||+
T Consensus 96 -----------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~ 140 (302)
T 4e5w_A 96 -----------------------------------GGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMD 140 (302)
T ss_dssp -------------------------------------CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHH
Confidence 13457999999964 99999954 457999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+|||++.++.+||+|||+++....... .........||+.|+|||++.+ ..++
T Consensus 141 ~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~~ 207 (302)
T 4e5w_A 141 YLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE------------YYTVKDDRDSPVFWYAPECLMQ-SKFY 207 (302)
T ss_dssp HHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCC------------EEECCCCTTCCGGGCCHHHHHH-CEEE
T ss_pred HhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCCc------------ceeccCCCCCCccccCCeeecC-CCCC
Confidence 99999999999999999999999999999999986532210 0112234578999999999987 5688
Q ss_pred CcchhHHHHHHHHHhhc---CC--------------chhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCC
Q 000993 614 EKADMYSLGIVFFELWH---PF--------------STAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 676 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf--------------~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~ 676 (1196)
.++|||||||++|+|++ |+ ............+. .....+.....++.+.+||++||+.||.+
T Consensus 208 ~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~ 286 (302)
T 4e5w_A 208 IASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK-EGKRLPCPPNCPDEVYQLMRKCWEFQPSN 286 (302)
T ss_dssp HHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHH-TTCCCCCCTTCCHHHHHHHHHTTCSSGGG
T ss_pred cchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHh-ccCCCCCCCCCCHHHHHHHHHHcCCCCCC
Confidence 99999999999999997 32 22222222233332 22333344566789999999999999999
Q ss_pred CCCHHHHHhc
Q 000993 677 RPSATELLQD 686 (1196)
Q Consensus 677 RPta~eiL~~ 686 (1196)
|||+.++++.
T Consensus 287 Rps~~~ll~~ 296 (302)
T 4e5w_A 287 RTSFQNLIEG 296 (302)
T ss_dssp SCCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 9999999864
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-38 Score=353.61 Aligned_cols=243 Identities=19% Similarity=0.291 Sum_probs=198.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCC-------cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeec
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDG-------RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFET 452 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g-------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~ 452 (1196)
.++|.+.+.||+|+||.||+|+++.++ ..||+|++... .....+.+.+|+.+++.++||||+++++++.+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~- 83 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA--HRNYSESFFEAASMMSKLSHKHLVLNYGVCVC- 83 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG--GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC-
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc--cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe-
Confidence 478999999999999999999998877 47999998643 23455789999999999999999999998732
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCC-CCHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH-FDKELAWHLFRQIVE 530 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~-l~e~~~~~i~~qIa~ 530 (1196)
....|+|||||+ ++|.+++..... +++..++.++.||+.
T Consensus 84 ---------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~ 124 (289)
T 4fvq_A 84 ---------------------------------------GDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAA 124 (289)
T ss_dssp ---------------------------------------TTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHH
T ss_pred ---------------------------------------CCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 234589999997 599999987654 999999999999999
Q ss_pred HHHHHHhCCCcccCCCcCcEEecCCCC--------eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCC
Q 000993 531 GLAHIHGQGIIHRDLTPNNIFFDARND--------IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 602 (1196)
Q Consensus 531 gL~yLHs~gIiHrDLKp~NILld~~~~--------vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 602 (1196)
||+|||++||+||||||+|||++.++. +||+|||+++..... ....||+.|+|
T Consensus 125 ~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------------------~~~~~~~~y~a 185 (289)
T 4fvq_A 125 AMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK-------------------DILQERIPWVP 185 (289)
T ss_dssp HHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH-------------------HHHHHTTTTSC
T ss_pred HHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCc-------------------cccCCcCcccC
Confidence 999999999999999999999999887 999999998754211 23468899999
Q ss_pred chhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC
Q 000993 603 PEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 679 (1196)
Q Consensus 603 PE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt 679 (1196)
||++.+...++.++|||||||++|||++ |+...................+.. .++++.+||++||+.||.+|||
T Consensus 186 PE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps 262 (289)
T 4fvq_A 186 PECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAP---KAAELANLINNCMDYEPDHRPS 262 (289)
T ss_dssp HHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC---SSCTTHHHHHHHSCSSGGGSCC
T ss_pred HHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCCCCCC---CCHHHHHHHHHHcCCChhHCcC
Confidence 9999874568999999999999999997 333333333333333333333333 3457889999999999999999
Q ss_pred HHHHHhc
Q 000993 680 ATELLQD 686 (1196)
Q Consensus 680 a~eiL~~ 686 (1196)
+.+++++
T Consensus 263 ~~~ll~~ 269 (289)
T 4fvq_A 263 FRAIIRD 269 (289)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999986
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-38 Score=361.09 Aligned_cols=257 Identities=25% Similarity=0.377 Sum_probs=185.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHH-HHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVA-TLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~-iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.++|++.+.||+|+||.||+|.++.+|+.||||+++... ......++.+|+. +++.++||||+++++++..
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~------- 92 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV-DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFR------- 92 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC-CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEEC-------
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc-CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEe-------
Confidence 478999999999999999999999999999999997543 2334455666666 6777899999999998743
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-----cCCCCHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-----YDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-----~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
....|+|||||+++|.+++.. ...+++..++.++.||+.||.
T Consensus 93 ---------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~ 139 (327)
T 3aln_A 93 ---------------------------------EGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALN 139 (327)
T ss_dssp ---------------------------------SSEEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHH
Confidence 346799999999998888763 567999999999999999999
Q ss_pred HHHhC-CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC---C
Q 000993 534 HIHGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG---W 609 (1196)
Q Consensus 534 yLHs~-gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~ 609 (1196)
|||++ ||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.. .
T Consensus 140 ~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~~ 203 (327)
T 3aln_A 140 HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI----------------AKTRDAGCRPYMAPERIDPSASR 203 (327)
T ss_dssp HHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC--------------------------------------------
T ss_pred HHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceeccccc----------------ccccCCCCccccCceeeccccCc
Confidence 99999 99999999999999999999999999997653211 1123479999999999842 2
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcC--CCC-CccccCCHHHHHHHHHcccCCCCCCCCHHHH
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG--ELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATEL 683 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~--~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~ei 683 (1196)
..++.++|||||||++|+|++ ||................. .++ ......++.+.+||++||+.||.+|||+.++
T Consensus 204 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el 283 (327)
T 3aln_A 204 QGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKEL 283 (327)
T ss_dssp --CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHH
Confidence 458999999999999999997 7765433222111111111 111 1223467899999999999999999999999
Q ss_pred HhccCCCCch
Q 000993 684 LQDALPPQME 693 (1196)
Q Consensus 684 L~~~~~~~~~ 693 (1196)
++|+|+....
T Consensus 284 l~hp~~~~~~ 293 (327)
T 3aln_A 284 LKHPFILMYE 293 (327)
T ss_dssp TTSHHHHHHH
T ss_pred HhChHHHHhH
Confidence 9999986543
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=353.15 Aligned_cols=255 Identities=25% Similarity=0.327 Sum_probs=196.6
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.+..+++|++.+.||+|+||.||+|++..+++.||||++..... .......+.+|+.+++.++||||+++++++..
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~--- 105 (309)
T 2h34_A 29 EGTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEI--- 105 (309)
T ss_dssp -----CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE---
T ss_pred CCcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEee---
Confidence 45567899999999999999999999999999999999875432 23345778999999999999999999988733
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
...+|++|||+++ +|.+++.....+++..++.++.||+.||+
T Consensus 106 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~ 148 (309)
T 2h34_A 106 -------------------------------------DGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALD 148 (309)
T ss_dssp -------------------------------------TTEEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCeEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 3568999999975 99999998889999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+|||++.++.+||+|||++........ .......||+.|+|||++.+ ..++
T Consensus 149 ~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~ 213 (309)
T 2h34_A 149 AAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKL--------------TQLGNTVGTLYYMAPERFSE-SHAT 213 (309)
T ss_dssp HHHHTTCCCSCCCGGGEEECTTSCEEECSCCC------------------------------CCGGGCCGGGTCC-----
T ss_pred HHHHCcCCcCCCChHHEEEcCCCCEEEecCccCcccccccc--------------ccccccCCCcCccCHHHHcC-CCCC
Confidence 99999999999999999999999999999999976532210 11234579999999999987 5789
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCC-CHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRP-SATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RP-ta~eiL~~ 686 (1196)
.++||||||+++|||++ ||........ ...+......+ ......++.+.++|.+||+.||.+|| +++++++.
T Consensus 214 ~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~ 290 (309)
T 2h34_A 214 YRADIYALTCVLYECLTGSPPYQGDQLSVM-GAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAA 290 (309)
T ss_dssp CCCHHHHHHHHHHHHHHSSCSSCSCHHHHH-HHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHH
T ss_pred chHhHHHHHHHHHHHHHCCCCCCCchHHHH-HHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHH
Confidence 99999999999999996 8876554432 22222222222 12334567899999999999999999 88888753
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=363.12 Aligned_cols=261 Identities=17% Similarity=0.281 Sum_probs=197.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCCchh---------HHHHHHHHHHHHhcCCCCeeee
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPV---------NDRILREVATLSRLQHQHVVRY 445 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~-----g~~vAVK~i~~~~~~~~~---------~~~~~~Ev~iL~~L~HpnIV~l 445 (1196)
.++|++.+.||+|+||.||+|.++.+ ++.||||++......... ...+.+|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 35899999999999999999999764 578999998754311000 0124456667778899999999
Q ss_pred eeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc-CCCCHHHHHHH
Q 000993 446 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHL 524 (1196)
Q Consensus 446 ~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i 524 (1196)
++++.... ....++|+|||||+++|.+++... ..+++..++.+
T Consensus 114 ~~~~~~~~------------------------------------~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i 157 (364)
T 3op5_A 114 WGSGLHDK------------------------------------NGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQL 157 (364)
T ss_dssp EEEEEEEE------------------------------------TTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHH
T ss_pred Eeeeeecc------------------------------------CCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHH
Confidence 99985421 123578999999977999999876 67999999999
Q ss_pred HHHHHHHHHHHHhCCCcccCCCcCcEEec--CCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCC
Q 000993 525 FRQIVEGLAHIHGQGIIHRDLTPNNIFFD--ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 602 (1196)
Q Consensus 525 ~~qIa~gL~yLHs~gIiHrDLKp~NILld--~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 602 (1196)
+.||+.||+|||++||+||||||+|||++ .++.+||+|||+|+.+.......... .......+||+.|+|
T Consensus 158 ~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~--------~~~~~~~~gt~~y~a 229 (364)
T 3op5_A 158 SLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYA--------ADPKRCHDGTIEFTS 229 (364)
T ss_dssp HHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSS--------CCSSCCCCCCTTTCC
T ss_pred HHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccc--------cCcccccCCCCCccC
Confidence 99999999999999999999999999999 88999999999998765332111100 111244579999999
Q ss_pred chhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhh--cCCCCCc------cccCCHHHHHHHHHccc
Q 000993 603 PEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQ--KGELPPS------WVAKFSEQESLLRRLMS 671 (1196)
Q Consensus 603 PE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~--~~~~p~~------~~~~~~~l~~LI~~cL~ 671 (1196)
||++.+ ..++.++|||||||+||||++ ||............... ...++.. ....++++.++|..||+
T Consensus 230 PE~~~~-~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 308 (364)
T 3op5_A 230 IDAHNG-VAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKL 308 (364)
T ss_dssp HHHHTT-CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHT
T ss_pred HHHhCC-CCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhc
Confidence 999988 568999999999999999997 88753322211111110 0011000 13456789999999999
Q ss_pred CCCCCCCCHHHHHh
Q 000993 672 PSPSDRPSATELLQ 685 (1196)
Q Consensus 672 ~dP~~RPta~eiL~ 685 (1196)
.||.+||++.++++
T Consensus 309 ~~p~~RP~~~~l~~ 322 (364)
T 3op5_A 309 LDYTEKPLYENLRD 322 (364)
T ss_dssp CCTTCCCCHHHHHH
T ss_pred CCCCCCCCHHHHHH
Confidence 99999999999986
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=350.19 Aligned_cols=248 Identities=23% Similarity=0.335 Sum_probs=191.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
.++|++.+.||+|+||.||+|.+..+ +..||+|+++.. ......+.+.+|+.+++.++||||+++++++.
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------ 86 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------ 86 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT-TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC------
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCccceEEEEEc------
Confidence 46899999999999999999999754 457999987643 33445677999999999999999999998762
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcC-CCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD-HFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~-~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|+|||||++ +|.+++.... .+++..++.++.||+.||+|
T Consensus 87 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~ 131 (281)
T 1mp8_A 87 -----------------------------------ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 131 (281)
T ss_dssp -----------------------------------SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 1235899999975 9999997654 69999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++.+||+|||+++....... .......+|+.|+|||++.+ ..++.
T Consensus 132 lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~ 196 (281)
T 1mp8_A 132 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY--------------YKASKGKLPIKWMAPESINF-RRFTS 196 (281)
T ss_dssp HHHTTCCCSCCSGGGEEEEETTEEEECC---------------------------------CCGGGCCHHHHHH-CCCSH
T ss_pred HHhCCeecccccHHHEEECCCCCEEECccccccccCcccc--------------cccccCCCcccccChhhccc-CCCCC
Confidence 9999999999999999999999999999999986532211 11233467889999999987 56899
Q ss_pred cchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 615 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 615 ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++|||||||++|||++ ||............. ....++.....++.+.++|.+||+.||.+|||+.+++++
T Consensus 197 ~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 270 (281)
T 1mp8_A 197 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE--NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 270 (281)
T ss_dssp HHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 9999999999999985 776554443333222 223333445667899999999999999999999999875
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-38 Score=357.32 Aligned_cols=253 Identities=27% Similarity=0.370 Sum_probs=197.9
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc----hhHHHHHHHHHHHHhc----CCCCeeeeee
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----PVNDRILREVATLSRL----QHQHVVRYYQ 447 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~----~~~~~~~~Ev~iL~~L----~HpnIV~l~~ 447 (1196)
...+.++|++.+.||+|+||.||+|++..+|+.||||++....... .....+.+|+.+++.+ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 3456788999999999999999999999999999999987543221 1223466799999999 8999999998
Q ss_pred eeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeee-cC-CCHHHHHhhcCCCCHHHHHHHH
Q 000993 448 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY-CP-RTLRQVFESYDHFDKELAWHLF 525 (1196)
Q Consensus 448 ~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy-~~-gsL~~~l~~~~~l~e~~~~~i~ 525 (1196)
++.. ....++|||| +. ++|.+++.....+++..++.++
T Consensus 106 ~~~~----------------------------------------~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~ 145 (312)
T 2iwi_A 106 WFET----------------------------------------QEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFF 145 (312)
T ss_dssp EC---------------------------------------------CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHH
T ss_pred EEec----------------------------------------CCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHH
Confidence 8732 3456899999 55 5999999988889999999999
Q ss_pred HHHHHHHHHHHhCCCcccCCCcCcEEec-CCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCch
Q 000993 526 RQIVEGLAHIHGQGIIHRDLTPNNIFFD-ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 604 (1196)
Q Consensus 526 ~qIa~gL~yLHs~gIiHrDLKp~NILld-~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 604 (1196)
.||+.||+|||++||+||||||+||+++ .++.+||+|||+++..... ......||+.|+|||
T Consensus 146 ~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE 208 (312)
T 2iwi_A 146 GQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE-----------------PYTDFDGTRVYSPPE 208 (312)
T ss_dssp HHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSS-----------------CBCCCCSCTTTSCHH
T ss_pred HHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccC-----------------cccccCCcccccCce
Confidence 9999999999999999999999999999 7899999999999764321 123456999999999
Q ss_pred hccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHH
Q 000993 605 IEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT 681 (1196)
Q Consensus 605 ~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ 681 (1196)
++.+...++.++|||||||++|||++ ||..... .......++ ...++.+.+||.+||+.||.+|||+.
T Consensus 209 ~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~ 279 (312)
T 2iwi_A 209 WISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEAELHFP---AHVSPDCCALIRRCLAPKPSSRPSLE 279 (312)
T ss_dssp HHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHHTCCCCC---TTSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred eeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH------HhhhccCCc---ccCCHHHHHHHHHHccCChhhCcCHH
Confidence 98874444568999999999999997 7755432 111122222 34567899999999999999999999
Q ss_pred HHHhccCCCCchH
Q 000993 682 ELLQDALPPQMEY 694 (1196)
Q Consensus 682 eiL~~~~~~~~~~ 694 (1196)
++++|+|+.....
T Consensus 280 e~l~~~~~~~~~~ 292 (312)
T 2iwi_A 280 EILLDPWMQTPAE 292 (312)
T ss_dssp HHHHSTTTCC---
T ss_pred HHhcChhhcCchh
Confidence 9999999987654
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=353.69 Aligned_cols=250 Identities=23% Similarity=0.299 Sum_probs=202.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.++|.+.+.||+|+||.||+|.+. .+++.||||+++.. ......+.+.+|+.+++.++||||++++++|.+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 97 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN-ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ--- 97 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCC-CCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec---
Confidence 368999999999999999999984 45689999998743 344556789999999999999999999998732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCC------------------
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH------------------ 515 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~------------------ 515 (1196)
...+|+|||||+ ++|.+++.....
T Consensus 98 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 140 (314)
T 2ivs_A 98 -------------------------------------DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140 (314)
T ss_dssp -------------------------------------SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC------------
T ss_pred -------------------------------------CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccc
Confidence 334699999997 699999976543
Q ss_pred ------CCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccc
Q 000993 516 ------FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV 589 (1196)
Q Consensus 516 ------l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~ 589 (1196)
+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... ..
T Consensus 141 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~-------------~~ 207 (314)
T 2ivs_A 141 HPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS-------------YV 207 (314)
T ss_dssp ----CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSC-------------EE
T ss_pred cccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEcccccccccccccc-------------ce
Confidence 88999999999999999999999999999999999999999999999999976532210 11
Q ss_pred cCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHH
Q 000993 590 DGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESL 665 (1196)
Q Consensus 590 ~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~L 665 (1196)
......+|+.|+|||++.+ ..++.++|||||||++|||++ ||.......... .+. ....++.....++.+.+|
T Consensus 208 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~l 284 (314)
T 2ivs_A 208 KRSQGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN-LLK-TGHRMERPDNCSEEMYRL 284 (314)
T ss_dssp CSSCCCSCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH-HHH-TTCCCCCCTTCCHHHHHH
T ss_pred eccCCCCcccccChhhhcC-CCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-Hhh-cCCcCCCCccCCHHHHHH
Confidence 2234567899999999987 568999999999999999996 665544333322 222 223333445667899999
Q ss_pred HHHcccCCCCCCCCHHHHHhc
Q 000993 666 LRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 666 I~~cL~~dP~~RPta~eiL~~ 686 (1196)
|.+||+.||.+|||+.+++++
T Consensus 285 i~~~l~~dp~~Rps~~~l~~~ 305 (314)
T 2ivs_A 285 MLQCWKQEPDKRPVFADISKD 305 (314)
T ss_dssp HHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHccCChhhCcCHHHHHHH
Confidence 999999999999999999975
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-37 Score=347.44 Aligned_cols=247 Identities=25% Similarity=0.405 Sum_probs=199.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhH-----HHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN-----DRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~-----~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.++|++.+.||+|+||.||+|++..+++.||||++.......... +.+.+|+.+++.++||||+++++++.+
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--- 94 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN--- 94 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT---
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC---
Confidence 478999999999999999999999999999999987654332222 678999999999999999999988722
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL 532 (1196)
.. ++||||++ ++|.+.+... ..+++..++.++.||+.||
T Consensus 95 -------------------------------------~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l 135 (287)
T 4f0f_A 95 -------------------------------------PP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135 (287)
T ss_dssp -------------------------------------TT--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CC--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHH
Confidence 11 69999997 6998877644 4799999999999999999
Q ss_pred HHHHhCC--CcccCCCcCcEEecCCCC-----eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchh
Q 000993 533 AHIHGQG--IIHRDLTPNNIFFDARND-----IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 605 (1196)
Q Consensus 533 ~yLHs~g--IiHrDLKp~NILld~~~~-----vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 605 (1196)
+|||++| |+||||||+|||++.++. +||+|||+++.... ......||+.|+|||+
T Consensus 136 ~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~------------------~~~~~~g~~~y~aPE~ 197 (287)
T 4f0f_A 136 EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH------------------SVSGLLGNFQWMAPET 197 (287)
T ss_dssp HHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSS------------------CEECCCCCCTTSCGGG
T ss_pred HHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccccc------------------cccccCCCccccCchh
Confidence 9999999 999999999999988776 99999999974321 1234579999999999
Q ss_pred ccC-CCCCCCcchhHHHHHHHHHhhc---CCchhHHHHH-HHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH
Q 000993 606 EQG-WPKIDEKADMYSLGIVFFELWH---PFSTAMERQI-VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA 680 (1196)
Q Consensus 606 l~~-~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~-~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta 680 (1196)
+.+ ...++.++|||||||++|||++ ||........ ...........+......++.+.+||.+||+.||.+|||+
T Consensus 198 ~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~ 277 (287)
T 4f0f_A 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHF 277 (287)
T ss_dssp SSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred hccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCH
Confidence 843 2447899999999999999997 7765433222 1222222333344445667899999999999999999999
Q ss_pred HHHHhc
Q 000993 681 TELLQD 686 (1196)
Q Consensus 681 ~eiL~~ 686 (1196)
.++++.
T Consensus 278 ~~ll~~ 283 (287)
T 4f0f_A 278 SYIVKE 283 (287)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999874
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=357.55 Aligned_cols=250 Identities=24% Similarity=0.354 Sum_probs=193.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEE----EEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~v----AVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
..++|++.+.||+|+||+||+|++..+++.+ |+|.++.. ........+.+|+.+++.++||||++++++|.+
T Consensus 13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 88 (327)
T 3poz_A 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLT--- 88 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEES---
T ss_pred CHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccc-cCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec---
Confidence 3478999999999999999999998887764 77766532 233345789999999999999999999998842
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL 532 (1196)
...+++|+|+. |+|.+++.. ...+++..++.++.||+.||
T Consensus 89 --------------------------------------~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l 130 (327)
T 3poz_A 89 --------------------------------------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 130 (327)
T ss_dssp --------------------------------------SSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 12578899986 699999876 45799999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||++||+||||||+|||++.++++||+|||+|+....... ........||+.|+|||++.+ ..+
T Consensus 131 ~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~-------------~~~~~~~~~t~~y~aPE~~~~-~~~ 196 (327)
T 3poz_A 131 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK-------------EYHAEGGKVPIKWMALESILH-RIY 196 (327)
T ss_dssp HHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC--------------------CCCGGGSCHHHHHH-CCC
T ss_pred HHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCcc-------------cccccCCCccccccChHHhcc-CCC
Confidence 999999999999999999999999999999999987643211 111234567899999999988 578
Q ss_pred CCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 613 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+.++|||||||++|||++ ||......... ..+. ....++.....++++.+++.+||+.||.+|||+.+++++
T Consensus 197 ~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 272 (327)
T 3poz_A 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILE-KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 272 (327)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH-HHHH-TTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred CchhhhhhhHHHHHHHHhcCCCCccCCCHHHHH-HHHH-cCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 999999999999999986 67654433322 2222 233333444567799999999999999999999999976
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-38 Score=358.41 Aligned_cols=252 Identities=26% Similarity=0.372 Sum_probs=207.1
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc----hhHHHHHHHHHHHHhcC--CCCeeeeeeeee
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----PVNDRILREVATLSRLQ--HQHVVRYYQAWF 450 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~----~~~~~~~~Ev~iL~~L~--HpnIV~l~~~~~ 450 (1196)
....++|++.+.||+|+||.||+|++..+|+.||||++....... .....+.+|+.+++.++ ||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 344678999999999999999999999999999999997653221 12245678999999996 599999999873
Q ss_pred ecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC--CCHHHHHhhcCCCCHHHHHHHHHHH
Q 000993 451 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP--RTLRQVFESYDHFDKELAWHLFRQI 528 (1196)
Q Consensus 451 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~--gsL~~~l~~~~~l~e~~~~~i~~qI 528 (1196)
. ...++++|||+. ++|.+++.....+++..++.++.||
T Consensus 119 ~----------------------------------------~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi 158 (320)
T 3a99_A 119 R----------------------------------------PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 158 (320)
T ss_dssp C----------------------------------------SSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred c----------------------------------------CCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHH
Confidence 2 356799999996 6999999988899999999999999
Q ss_pred HHHHHHHHhCCCcccCCCcCcEEec-CCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 529 VEGLAHIHGQGIIHRDLTPNNIFFD-ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 529 a~gL~yLHs~gIiHrDLKp~NILld-~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
+.||+|||++||+||||||+|||++ .++.+||+|||+++..... ......||+.|+|||++.
T Consensus 159 ~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~-----------------~~~~~~gt~~y~aPE~~~ 221 (320)
T 3a99_A 159 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----------------VYTDFDGTRVYSPPEWIR 221 (320)
T ss_dssp HHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSS-----------------CBCCCCSCGGGSCHHHHH
T ss_pred HHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCccccccccc-----------------cccCCCCCccCCChHHhc
Confidence 9999999999999999999999999 7799999999999764321 113357999999999998
Q ss_pred CCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHH
Q 000993 608 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 684 (1196)
Q Consensus 608 ~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL 684 (1196)
+...++.++|||||||++|||++ ||...... .......+ ...++++.+||++||+.||.+|||+.+++
T Consensus 222 ~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~------~~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~~ll 292 (320)
T 3a99_A 222 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI------IRGQVFFR---QRVSSECQHLIRWCLALRPSDRPTFEEIQ 292 (320)
T ss_dssp HSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH------HHCCCCCS---SCCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred cCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh------hccccccc---ccCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 75545789999999999999997 77654321 11111222 34567999999999999999999999999
Q ss_pred hccCCCCchH
Q 000993 685 QDALPPQMEY 694 (1196)
Q Consensus 685 ~~~~~~~~~~ 694 (1196)
+|+||.....
T Consensus 293 ~hp~~~~~~~ 302 (320)
T 3a99_A 293 NHPWMQDVLL 302 (320)
T ss_dssp TSGGGSSCCC
T ss_pred cCHhhcCccC
Confidence 9999988754
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-37 Score=348.54 Aligned_cols=252 Identities=27% Similarity=0.504 Sum_probs=193.5
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
..+++|++.+.||+|+||.||+|.+..+|+.||||++.... ........+.+|+.+++.++||||++++++|.+
T Consensus 29 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----- 103 (310)
T 2wqm_A 29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE----- 103 (310)
T ss_dssp SSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----
T ss_pred ccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----
Confidence 34678999999999999999999999999999999997543 234456778999999999999999999998743
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh----cCCCCHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~qIa~g 531 (1196)
...+|+||||+++ +|.+++.. ...+++..++.++.||+.|
T Consensus 104 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~ 148 (310)
T 2wqm_A 104 -----------------------------------DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148 (310)
T ss_dssp -----------------------------------TTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHH
Confidence 3467999999975 99998864 4569999999999999999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
|+|||++||+||||||+||+++.++.+||+|||+++...... .......||+.|+|||++.+ ..
T Consensus 149 l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~ 212 (310)
T 2wqm_A 149 LEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT---------------TAAHSLVGTPYYMSPERIHE-NG 212 (310)
T ss_dssp HHHHHHTTCCCCCCCGGGEEECTTSCEEECCC---------------------------------CCSSCCHHHHTT-CC
T ss_pred HHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCC---------------ccccccCCCeeEeChHHhCC-CC
Confidence 999999999999999999999999999999999998653221 01234578999999999987 56
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHH-HHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMER-QIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~-~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++.++||||||+++|+|++ ||...... ......+. ....++ .....++++.+||.+||+.||.+|||+.+++++
T Consensus 213 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~ 291 (310)
T 2wqm_A 213 YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE-QCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDV 291 (310)
T ss_dssp CCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHH-TTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhh-cccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 8999999999999999997 77543221 11222222 223332 224567789999999999999999999999974
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-37 Score=343.24 Aligned_cols=245 Identities=24% Similarity=0.377 Sum_probs=191.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC--chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS--LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~--~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.++|++.+.||+|+||.||+|.+. |+.||||+++..... ....+.+.+|+.+++.++||||+++++++.+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 77 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK------ 77 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECC------
T ss_pred hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec------
Confidence 478999999999999999999985 899999998654322 2234678899999999999999999998732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+|||||+ ++|.+++. ...+++..++.++.||+.||+|||
T Consensus 78 ----------------------------------~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH 122 (271)
T 3dtc_A 78 ----------------------------------EPNLCLVMEFARGGPLNRVLS-GKRIPPDILVNWAVQIARGMNYLH 122 (271)
T ss_dssp ----------------------------------C--CEEEEECCTTEEHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCceEEEEEcCCCCCHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345699999997 58888875 457999999999999999999999
Q ss_pred hCC---CcccCCCcCcEEecC--------CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchh
Q 000993 537 GQG---IIHRDLTPNNIFFDA--------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 605 (1196)
Q Consensus 537 s~g---IiHrDLKp~NILld~--------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 605 (1196)
++| |+||||||+|||++. ++.+||+|||+++...... .....||+.|+|||+
T Consensus 123 ~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----------------~~~~~~~~~y~aPE~ 185 (271)
T 3dtc_A 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT-----------------KMSAAGAYAWMAPEV 185 (271)
T ss_dssp HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC------------------------------CCGGGSCHHH
T ss_pred hCCCCceeecCCchHHEEEecccccccccCcceEEccCCccccccccc-----------------ccCCCCccceeCHHH
Confidence 999 899999999999986 6789999999997643211 123479999999999
Q ss_pred ccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHH
Q 000993 606 EQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 682 (1196)
Q Consensus 606 l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~e 682 (1196)
+.+ ..++.++||||||+++|+|++ ||.............. ....++.....++.+.++|.+||+.||.+|||+.+
T Consensus 186 ~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e 263 (271)
T 3dtc_A 186 IRA-SMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAM-NKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTN 263 (271)
T ss_dssp HHH-CCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHT-SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred hcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhc-CCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHH
Confidence 987 568999999999999999996 8876655554444333 22223333456788999999999999999999999
Q ss_pred HHhc
Q 000993 683 LLQD 686 (1196)
Q Consensus 683 iL~~ 686 (1196)
++++
T Consensus 264 ~l~~ 267 (271)
T 3dtc_A 264 ILDQ 267 (271)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9976
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=346.93 Aligned_cols=260 Identities=35% Similarity=0.658 Sum_probs=203.3
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
.++.++|++.+.||+|+||.||+|++..+|+.||+|+++... ..+.+|+.+++.++||||++++++|.......
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 80 (284)
T 2a19_B 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDP 80 (284)
T ss_dssp HHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-
T ss_pred chhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCc
Confidence 345678999999999999999999999999999999997532 24678999999999999999999874321100
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc--CCCCHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~--~~l~e~~~~~i~~qIa~gL~ 533 (1196)
. .............+|+|||||++ +|.+++... ..+++..++.++.||+.||+
T Consensus 81 ---~---------------------~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~ 136 (284)
T 2a19_B 81 ---E---------------------TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVD 136 (284)
T ss_dssp --------------------------------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHH
T ss_pred ---c---------------------cccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHH
Confidence 0 00000111235678999999985 999999754 57999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.+ ..++
T Consensus 137 ~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~ 199 (284)
T 2a19_B 137 YIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG----------------KRTRSKGTLRYMSPEQISS-QDYG 199 (284)
T ss_dssp HHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCS----------------CCCCCCSCCTTSCHHHHHC-SCCC
T ss_pred HHHhCCeeeccCCHHHEEEcCCCCEEECcchhheeccccc----------------cccccCCcccccChhhhcc-CCCc
Confidence 9999999999999999999999999999999997643211 1234579999999999987 5689
Q ss_pred CcchhHHHHHHHHHhhcCCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 614 EKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 614 ~ksDVwSlGviLyELltPf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
.++|||||||++|||++...+..........+. ....+. ..++.+.+||.+||+.||.+|||+.+++++.
T Consensus 200 ~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l 269 (284)
T 2a19_B 200 KEVDLYALGLILAELLHVCDTAFETSKFFTDLR-DGIISD---IFDKKEKTLLQKLLSKKPEDRPNTSEILRTL 269 (284)
T ss_dssp THHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHH-TTCCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHhcCCcchhHHHHHHHhh-cccccc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 999999999999999984333322222222222 222332 3456899999999999999999999999875
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=358.47 Aligned_cols=251 Identities=22% Similarity=0.268 Sum_probs=200.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~ 453 (1196)
.++|++.+.||+|+||.||+|++. .++..||||+++... .......+.+|+.+++.+ +||||++++++|..
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-- 120 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTL-- 120 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee--
Confidence 478999999999999999999983 356789999997432 223446789999999999 99999999998732
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC------------------
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD------------------ 514 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~------------------ 514 (1196)
...+|+|||||+ ++|.+++....
T Consensus 121 --------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 162 (344)
T 1rjb_A 121 --------------------------------------SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEE 162 (344)
T ss_dssp --------------------------------------SSSCEEEEECCTTCBHHHHHHTTTTCC---------------
T ss_pred --------------------------------------CCccEEEEecCCCCcHHHHHhhccccccccccchhhhccccc
Confidence 234699999996 59999997643
Q ss_pred -----CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccc
Q 000993 515 -----HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV 589 (1196)
Q Consensus 515 -----~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~ 589 (1196)
.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... ..
T Consensus 163 ~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~-------------~~ 229 (344)
T 1rjb_A 163 EEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN-------------YV 229 (344)
T ss_dssp ------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT-------------SE
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCcc-------------ce
Confidence 378999999999999999999999999999999999999999999999999986532210 01
Q ss_pred cCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHH
Q 000993 590 DGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESL 665 (1196)
Q Consensus 590 ~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~L 665 (1196)
......||+.|+|||++.+ ..++.++|||||||++|||++ ||............+. ....++.....++++.+|
T Consensus 230 ~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l 307 (344)
T 1rjb_A 230 VRGNARLPVKWMAPESLFE-GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQ-NGFKMDQPFYATEEIYII 307 (344)
T ss_dssp EETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH-TTCCCCCCTTCCHHHHHH
T ss_pred eccCccCccCccCHHHhcc-CCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHh-cCCCCCCCCCCCHHHHHH
Confidence 1234568899999999987 568999999999999999996 7765543333333333 223333334567899999
Q ss_pred HHHcccCCCCCCCCHHHHHhc
Q 000993 666 LRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 666 I~~cL~~dP~~RPta~eiL~~ 686 (1196)
|.+||+.||.+|||+.+++++
T Consensus 308 i~~~l~~dp~~Rps~~~l~~~ 328 (344)
T 1rjb_A 308 MQSCWAFDSRKRPSFPNLTSF 328 (344)
T ss_dssp HHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHcCCCchhCcCHHHHHHH
Confidence 999999999999999999986
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-37 Score=358.91 Aligned_cols=250 Identities=23% Similarity=0.351 Sum_probs=203.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-------CcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeee
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLD-------GRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFE 451 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~-------g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e 451 (1196)
.++|.+.+.||+|+||.||+|++..+ +..||||+++.. ........+.+|+.+++.+ +|||||+++++|.+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc-cCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 47899999999999999999998643 357999998743 3444567899999999999 99999999998732
Q ss_pred cCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----------------
Q 000993 452 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---------------- 514 (1196)
Q Consensus 452 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---------------- 514 (1196)
...+|+|||||+ ++|.+++....
T Consensus 147 ----------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~ 186 (382)
T 3tt0_A 147 ----------------------------------------DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE 186 (382)
T ss_dssp ----------------------------------------SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCC
T ss_pred ----------------------------------------CCceEEEEEecCCCcHHHHHHHhccccccccccccccccc
Confidence 234699999996 59999997653
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCc
Q 000993 515 HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 594 (1196)
Q Consensus 515 ~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (1196)
.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+....... .......
T Consensus 187 ~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~-------------~~~~~~~ 253 (382)
T 3tt0_A 187 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY-------------YKKTTNG 253 (382)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCT-------------TCCCTTC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCcccccccccc-------------cccccCC
Confidence 499999999999999999999999999999999999999999999999999986532210 1122345
Q ss_pred cccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 000993 595 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 670 (1196)
Q Consensus 595 ~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL 670 (1196)
.||+.|+|||++.+ ..++.++|||||||++|||++ ||......+.... +. ....+......++++.+||++||
T Consensus 254 ~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~li~~~l 330 (382)
T 3tt0_A 254 RLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL-LK-EGHRMDKPSNCTNELYMMMRDCW 330 (382)
T ss_dssp CCGGGGSCHHHHHS-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH-HH-TTCCCCCCSSCCHHHHHHHHHHT
T ss_pred CCCcceeCHHHhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HH-cCCCCCCCccCCHHHHHHHHHHc
Confidence 68899999999988 578999999999999999986 7765554443332 22 22233334456789999999999
Q ss_pred cCCCCCCCCHHHHHhc
Q 000993 671 SPSPSDRPSATELLQD 686 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~ 686 (1196)
+.||.+|||+.+++++
T Consensus 331 ~~dP~~Rps~~ell~~ 346 (382)
T 3tt0_A 331 HAVPSQRPTFKQLVED 346 (382)
T ss_dssp CSSGGGSCCHHHHHHH
T ss_pred CCChhhCcCHHHHHHH
Confidence 9999999999999975
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-37 Score=350.46 Aligned_cols=251 Identities=24% Similarity=0.286 Sum_probs=202.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEE-----ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKN-----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~-----~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~ 453 (1196)
.++|++.+.||+|+||.||+|.+ ..+++.||||+++.. ......+.+.+|+.+++.+ +||||++++++|..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-- 98 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLSYLGNHMNIVNLLGACTI-- 98 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcc-hhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec--
Confidence 36899999999999999999996 346789999998743 2334557899999999999 99999999998732
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcC------------------
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD------------------ 514 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~------------------ 514 (1196)
....|+|||||++ +|.+++....
T Consensus 99 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 140 (313)
T 1t46_A 99 --------------------------------------GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 140 (313)
T ss_dssp --------------------------------------SSSCEEEEECCTTEEHHHHHHHTTTTC--------------C
T ss_pred --------------------------------------CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccc
Confidence 2346899999975 9999997653
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCc
Q 000993 515 HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 594 (1196)
Q Consensus 515 ~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (1196)
.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... .......
T Consensus 141 ~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~ 207 (313)
T 1t46_A 141 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN-------------YVVKGNA 207 (313)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTT-------------SEECSSS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEcccccccccccccc-------------ceeccCC
Confidence 489999999999999999999999999999999999999999999999999986532210 0112345
Q ss_pred cccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 000993 595 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 670 (1196)
Q Consensus 595 ~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL 670 (1196)
.||+.|+|||++.+ ..++.++|||||||++|||++ ||............+... ..+......++.+.+||.+||
T Consensus 208 ~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l 285 (313)
T 1t46_A 208 RLPVKWMAPESIFN-CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG-FRMLSPEHAPAEMYDIMKTCW 285 (313)
T ss_dssp EECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHT-CCCCCCTTSCHHHHHHHHHHT
T ss_pred CCcceeeChHHhcC-CCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccC-CCCCCcccCCHHHHHHHHHHc
Confidence 68899999999987 568999999999999999986 665543333333333322 223333456779999999999
Q ss_pred cCCCCCCCCHHHHHhc
Q 000993 671 SPSPSDRPSATELLQD 686 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~ 686 (1196)
+.||.+|||+.+++++
T Consensus 286 ~~dp~~Rps~~ell~~ 301 (313)
T 1t46_A 286 DADPLKRPTFKQIVQL 301 (313)
T ss_dssp CSSGGGSCCHHHHHHH
T ss_pred CCCchhCcCHHHHHHH
Confidence 9999999999999975
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-37 Score=347.40 Aligned_cols=250 Identities=22% Similarity=0.284 Sum_probs=200.9
Q ss_pred CCceEEe-eeccCCcEEEEEEEE--ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQ-PLGHGGFGHVVLCKN--KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~-~LG~G~fG~Vy~a~~--~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
++|.+.+ .||+|+||.||+|.+ ..+++.||||+++.........+.+.+|+.+++.++||||+++++++ +
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~------ 88 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-E------ 88 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-E------
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-C------
Confidence 5788888 999999999999955 55688999999976555555567899999999999999999999887 1
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+||||++ ++|.+++.....+++..++.++.||+.||+|||
T Consensus 89 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH 134 (291)
T 1xbb_A 89 ----------------------------------AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE 134 (291)
T ss_dssp ----------------------------------SSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHH
Confidence 234689999997 599999998888999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++.+||+|||+++....... .........+|+.|+|||++.+ ..++.++
T Consensus 135 ~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 201 (291)
T 1xbb_A 135 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN------------YYKAQTHGKWPVKWYAPECINY-YKFSSKS 201 (291)
T ss_dssp HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCS------------EEEC----CCCGGGCCHHHHHH-CEEEHHH
T ss_pred hCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCC------------cccccccCCCCceeeChHHhcc-CCCChhh
Confidence 99999999999999999999999999999986532210 0111233457899999999987 4688999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||||||+++|+|++ ||......+...... ....+......++.+.++|.+||+.||.+||++.++++.
T Consensus 202 Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 273 (291)
T 1xbb_A 202 DVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE--KGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR 273 (291)
T ss_dssp HHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999996 777655544333222 233333444567899999999999999999999999863
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-37 Score=352.21 Aligned_cols=252 Identities=23% Similarity=0.326 Sum_probs=202.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~ 453 (1196)
.++|++.+.||+|+||.||+|++. .+++.||||+++.. ........+.+|+.+++.+ +||||++++++|...
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~- 103 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP- 103 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT-
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccC-CCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecC-
Confidence 368999999999999999999963 46789999998743 3334556799999999999 799999999987431
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCC----------------C
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDH----------------F 516 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~----------------l 516 (1196)
...+|+|||||++ +|.+++..... +
T Consensus 104 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 145 (316)
T 2xir_A 104 --------------------------------------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145 (316)
T ss_dssp --------------------------------------TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCE
T ss_pred --------------------------------------CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhcccc
Confidence 2346999999975 99999986543 8
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccc
Q 000993 517 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 596 (1196)
Q Consensus 517 ~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 596 (1196)
++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...... .........|
T Consensus 146 ~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-------------~~~~~~~~~~ 212 (316)
T 2xir_A 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP-------------DYVRKGDARL 212 (316)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCT-------------TSEEETTEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCccccccccCc-------------cceeccCCCc
Confidence 999999999999999999999999999999999999999999999999998643211 0111234568
Q ss_pred cccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccC
Q 000993 597 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 672 (1196)
Q Consensus 597 T~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~ 672 (1196)
|+.|+|||++.+ ..++.++|||||||++|||++ ||............+... ..++.....++.+.++|.+||+.
T Consensus 213 t~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~ 290 (316)
T 2xir_A 213 PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRMRAPDYTTPEMYQTMLDCWHG 290 (316)
T ss_dssp CGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHT-CCCCCCTTCCHHHHHHHHHHTCS
T ss_pred ceeecCchhhcc-ccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccC-ccCCCCCCCCHHHHHHHHHHcCC
Confidence 999999999987 568999999999999999996 776544333333333322 22223344678999999999999
Q ss_pred CCCCCCCHHHHHhc
Q 000993 673 SPSDRPSATELLQD 686 (1196)
Q Consensus 673 dP~~RPta~eiL~~ 686 (1196)
||.+|||+.++++|
T Consensus 291 dp~~Rps~~ell~~ 304 (316)
T 2xir_A 291 EPSQRPTFSELVEH 304 (316)
T ss_dssp SGGGSCCHHHHHHH
T ss_pred ChhhCcCHHHHHHH
Confidence 99999999999987
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-37 Score=349.50 Aligned_cols=240 Identities=30% Similarity=0.460 Sum_probs=191.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||+||+|++. ++.||||++.. ....+.+.+|+.+++.++||||+++++++.
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------- 71 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIES----ESERKAFIVELRQLSRVNHPNIVKLYGACL--------- 71 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSS----TTHHHHHHHHHHHHHHCCCTTBCCEEEBCT---------
T ss_pred HhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecC----hhHHHHHHHHHHHHhcCCCCCcCeEEEEEc---------
Confidence 468999999999999999999885 88999998853 234567899999999999999999998762
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---HFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...|+|||||+ ++|.+++.... .++...++.++.||+.||+||
T Consensus 72 ---------------------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~L 118 (307)
T 2eva_A 72 ---------------------------------NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 118 (307)
T ss_dssp ---------------------------------TTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHH
Confidence 12489999996 59999998655 378999999999999999999
Q ss_pred Hh---CCCcccCCCcCcEEecCCCC-eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 536 HG---QGIIHRDLTPNNIFFDARND-IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 536 Hs---~gIiHrDLKp~NILld~~~~-vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
|+ +||+||||||+|||++.++. +||+|||+++..... .....||+.|+|||++.+ ..
T Consensus 119 H~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~------------------~~~~~gt~~y~aPE~~~~-~~ 179 (307)
T 2eva_A 119 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH------------------MTNNKGSAAWMAPEVFEG-SN 179 (307)
T ss_dssp HTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------------------------CCTTSSCHHHHTC-CC
T ss_pred HhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc------------------cccCCCCCceEChhhhCC-CC
Confidence 99 89999999999999998887 799999999754211 123469999999999987 57
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++.++|||||||++|||++ ||...................++.....++.+.+||.+||+.||.+|||+.+++++
T Consensus 180 ~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 257 (307)
T 2eva_A 180 YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKI 257 (307)
T ss_dssp CCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 8999999999999999997 77643222111111122344455556677899999999999999999999999974
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-37 Score=356.89 Aligned_cols=262 Identities=18% Similarity=0.246 Sum_probs=197.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc---CCcEEEEEEEecCCCCch---------hHHHHHHHHHHHHhcCCCCeeeeee
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKL---DGRHYAVKKIRLKDKSLP---------VNDRILREVATLSRLQHQHVVRYYQ 447 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~---~g~~vAVK~i~~~~~~~~---------~~~~~~~Ev~iL~~L~HpnIV~l~~ 447 (1196)
.++|++.+.||+|+||.||+|++.. ++..+|||++........ ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 3679999999999999999999987 788999999875432111 1124668889999999999999999
Q ss_pred eeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHH
Q 000993 448 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQ 527 (1196)
Q Consensus 448 ~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~q 527 (1196)
++.... .....+|+|||||+++|.+++.....+++..++.++.|
T Consensus 116 ~~~~~~------------------------------------~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~q 159 (345)
T 2v62_A 116 SGLTEF------------------------------------KGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIR 159 (345)
T ss_dssp EEEEES------------------------------------SSCEEEEEEEECEEEEHHHHCBGGGBCCHHHHHHHHHH
T ss_pred cccccc------------------------------------CCCcEEEEEEeccCCCHHHHHHhcCCCCHHHHHHHHHH
Confidence 885421 12467899999997799999988779999999999999
Q ss_pred HHHHHHHHHhCCCcccCCCcCcEEecCCC--CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchh
Q 000993 528 IVEGLAHIHGQGIIHRDLTPNNIFFDARN--DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 605 (1196)
Q Consensus 528 Ia~gL~yLHs~gIiHrDLKp~NILld~~~--~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 605 (1196)
|+.||+|||++||+||||||+|||++.++ .+||+|||+++.+......... .........||+.|+|||+
T Consensus 160 i~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~--------~~~~~~~~~gt~~y~aPE~ 231 (345)
T 2v62_A 160 MLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQY--------QENPRKGHNGTIEFTSLDA 231 (345)
T ss_dssp HHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCC--------CCCGGGCSCSCTTTCCHHH
T ss_pred HHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccc--------hhccccccCCCccccCHHH
Confidence 99999999999999999999999999887 9999999999876433211000 0111245689999999999
Q ss_pred ccCCCCCCCcchhHHHHHHHHHhhc---CCchhHH--HHHHHHHhhhcCCCCCcc------ccCCHHHHHHHHHcccCCC
Q 000993 606 EQGWPKIDEKADMYSLGIVFFELWH---PFSTAME--RQIVLSDLKQKGELPPSW------VAKFSEQESLLRRLMSPSP 674 (1196)
Q Consensus 606 l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~--~~~~~~~l~~~~~~p~~~------~~~~~~l~~LI~~cL~~dP 674 (1196)
+.+ ..++.++|||||||++|||++ ||..... ..............|... ...++++.++|.+||+.||
T Consensus 232 ~~~-~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp 310 (345)
T 2v62_A 232 HKG-VALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAY 310 (345)
T ss_dssp HHT-CCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCT
T ss_pred hcC-CCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCc
Confidence 998 568999999999999999997 8854221 111111111112222211 1566799999999999999
Q ss_pred CCCCCHHHHHhc
Q 000993 675 SDRPSATELLQD 686 (1196)
Q Consensus 675 ~~RPta~eiL~~ 686 (1196)
.+|||+.++++.
T Consensus 311 ~~Rps~~~l~~~ 322 (345)
T 2v62_A 311 DEKPNYQALKKI 322 (345)
T ss_dssp TCCCCHHHHHHH
T ss_pred ccCCCHHHHHHH
Confidence 999999999874
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=362.30 Aligned_cols=253 Identities=21% Similarity=0.300 Sum_probs=193.3
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
...++|++.+.||+|+||.||+|+++ .++..||||+++... .....+.+.+|+.+++.++||||+++++++.+
T Consensus 42 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--- 117 (373)
T 2qol_A 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--- 117 (373)
T ss_dssp CCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---
T ss_pred cCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee---
Confidence 34568999999999999999999987 467789999987532 34456789999999999999999999998732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL 532 (1196)
...+|+|||||+ ++|.+++.... .+++.+++.++.||+.||
T Consensus 118 -------------------------------------~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL 160 (373)
T 2qol_A 118 -------------------------------------SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160 (373)
T ss_dssp -------------------------------------SSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 345699999996 69999997654 699999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||++||+||||||+|||++.++.+||+|||+++........ ........+|+.|+|||++.+ ..+
T Consensus 161 ~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~ 227 (373)
T 2qol_A 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA------------AYTTRGGKIPIRWTSPEAIAY-RKF 227 (373)
T ss_dssp HHHHHTTCCCSCCCGGGEEECTTCCEEECCC----------------------------------CTTSCHHHHHH-CCC
T ss_pred HHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCcc------------ceeccCCCcCCCccChhhhcc-CCc
Confidence 9999999999999999999999999999999999875422100 011223356789999999987 568
Q ss_pred CCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 613 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+.++|||||||++|||++ ||.............. ...++.....++.+.+||.+||+.||.+||++.++++.
T Consensus 228 ~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~ 303 (373)
T 2qol_A 228 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE--GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303 (373)
T ss_dssp CHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHT--TEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc--CCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHH
Confidence 999999999999999885 7776555444333222 22222334566789999999999999999999999863
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=355.68 Aligned_cols=252 Identities=22% Similarity=0.278 Sum_probs=194.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||+||+|++. ++.||||+++.. ........+|+.+++.++|||||++++++.+..
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------ 91 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQ---DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGT------ 91 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC------
T ss_pred hhhchhhheecccCceEEEEEEEC--CCEEEEEEeecC---chHHHHHHHHHHHHhcCCCCCchhhcceeccCC------
Confidence 368999999999999999999886 899999998643 233445667999999999999999999985431
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
.....+|+|||||+ |+|.+++.. ..+++..++.++.||+.||+|||+.
T Consensus 92 ------------------------------~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~qi~~al~~LH~~ 140 (322)
T 3soc_A 92 ------------------------------SVDVDLWLITAFHEKGSLSDFLKA-NVVSWNELCHIAETMARGLAYLHED 140 (322)
T ss_dssp ------------------------------SSSEEEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHTCC
T ss_pred ------------------------------CCCceEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 11346899999997 499999976 4599999999999999999999999
Q ss_pred ----------CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 539 ----------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 539 ----------gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
||+||||||+|||++.++.+||+|||+++....... .......+||+.|+|||++.+
T Consensus 141 ~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~ 207 (322)
T 3soc_A 141 IPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS-------------AGDTHGQVGTRRYMAPEVLEG 207 (322)
T ss_dssp EEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSC-------------CCCCTTCCCCGGGCCHHHHTT
T ss_pred ccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccC-------------ccccccCccCccccCHhhccc
Confidence 999999999999999999999999999986532210 112234689999999999986
Q ss_pred C----CCCCCcchhHHHHHHHHHhhc---CCchhH---------------HHHHHHHHhhhcCCCC---Ccccc--CCHH
Q 000993 609 W----PKIDEKADMYSLGIVFFELWH---PFSTAM---------------ERQIVLSDLKQKGELP---PSWVA--KFSE 661 (1196)
Q Consensus 609 ~----~~~s~ksDVwSlGviLyELlt---Pf~~~~---------------~~~~~~~~l~~~~~~p---~~~~~--~~~~ 661 (1196)
. ..++.++|||||||++|||++ ||.... ...............| ..+.. .+++
T Consensus 208 ~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (322)
T 3soc_A 208 AINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAM 287 (322)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHH
T ss_pred ccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHH
Confidence 3 235568899999999999997 664321 1111122222222222 11111 1245
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 662 QESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 662 l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+.+||++||+.||.+|||+.++++.
T Consensus 288 l~~li~~cl~~dP~~Rps~~ell~~ 312 (322)
T 3soc_A 288 LCETIEECWDHDAEARLSAGCVGER 312 (322)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHHHH
Confidence 8999999999999999999999974
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=366.60 Aligned_cols=244 Identities=24% Similarity=0.320 Sum_probs=201.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||+||+|.+. ++..||||+++... ...+.+.+|+.+|+.++|||||++++++.
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~l~~~~~--------- 253 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVT--------- 253 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS---BCHHHHHHHHHHHTTCCCTTBCCEEEEEC---------
T ss_pred hHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC---ccHHHHHHHHHHHhhCCCCCEeeEEEEEe---------
Confidence 468999999999999999999997 57889999997533 23568999999999999999999998862
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+|||||+ |+|.+++... ..+++..++.++.||+.||+|||
T Consensus 254 --------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH 301 (454)
T 1qcf_A 254 --------------------------------KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 301 (454)
T ss_dssp --------------------------------SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 123689999996 5999999754 36899999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++.+||+|||+++........ ......+|+.|+|||++.+ ..++.++
T Consensus 302 ~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~--------------~~~~~~~~~~y~aPE~~~~-~~~~~~~ 366 (454)
T 1qcf_A 302 QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT--------------AREGAKFPIKWTAPEAINF-GSFTIKS 366 (454)
T ss_dssp HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH--------------TTCSSSSCGGGSCHHHHHH-CCCCHHH
T ss_pred hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee--------------ccCCCcccccccCHHHhcc-CCCCcHH
Confidence 999999999999999999999999999999875432111 1233457889999999987 5699999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
|||||||+||||++ ||......+....... . ..++.....++++.+||.+||+.||.+|||+.+|++
T Consensus 367 DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~-~-~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~ 437 (454)
T 1qcf_A 367 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER-G-YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 437 (454)
T ss_dssp HHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHH-T-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-C-CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 99999999999997 7876655554433322 2 223334566789999999999999999999999986
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-37 Score=357.04 Aligned_cols=257 Identities=23% Similarity=0.339 Sum_probs=180.4
Q ss_pred CCcccCCceEEe-eeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 376 SSRYLNDFEELQ-PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 376 ~~~~~~~y~~~~-~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.....++|.+.+ .||+|+||+||+|+++.+|+.||||++... ... ..+....++.+.||||++++++|....
T Consensus 23 ~~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~---~~e~~~~~~~~~h~~i~~~~~~~~~~~- 95 (336)
T 3fhr_A 23 KYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS---PKA---RQEVDHHWQASGGPHIVCILDVYENMH- 95 (336)
T ss_dssp CSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS---HHH---HHHHHHHHHHTTSTTBCCEEEEEEEEE-
T ss_pred CccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc---HHH---HHHHHHHHHhcCCCChHHHHHHHhhcc-
Confidence 344568999966 599999999999999999999999998632 111 222233456679999999999874311
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcC--CCCHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD--HFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~--~l~e~~~~~i~~qIa~g 531 (1196)
.....+|+|||||++ +|.+++.... .+++.+++.++.||+.|
T Consensus 96 -----------------------------------~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~ 140 (336)
T 3fhr_A 96 -----------------------------------HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTA 140 (336)
T ss_dssp -----------------------------------TTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 124568999999975 9999998654 69999999999999999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCC---CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
|+|||++||+||||||+|||++.+ +.+||+|||+++..... .....+||+.|+|||++.+
T Consensus 141 l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~-----------------~~~~~~~t~~y~aPE~~~~ 203 (336)
T 3fhr_A 141 IQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN-----------------ALQTPCYTPYYVAPEVLGP 203 (336)
T ss_dssp HHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC---------------------------------------
T ss_pred HHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceecccc-----------------ccccCCCCcCccChhhhCC
Confidence 999999999999999999999864 55999999999754311 1234578999999999976
Q ss_pred CCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHH----HHhhhcCC-CCCccccCCHHHHHHHHHcccCCCCCCCCH
Q 000993 609 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVL----SDLKQKGE-LPPSWVAKFSEQESLLRRLMSPSPSDRPSA 680 (1196)
Q Consensus 609 ~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~----~~l~~~~~-~p~~~~~~~~~l~~LI~~cL~~dP~~RPta 680 (1196)
..++.++|||||||++|+|++ ||.......... ........ .++.+...++++.+||++||+.||.+|||+
T Consensus 204 -~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 282 (336)
T 3fhr_A 204 -EKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTI 282 (336)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred -CCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCH
Confidence 568999999999999999996 776554332211 11111112 223445678899999999999999999999
Q ss_pred HHHHhccCCCCc
Q 000993 681 TELLQDALPPQM 692 (1196)
Q Consensus 681 ~eiL~~~~~~~~ 692 (1196)
.++++|+||.+.
T Consensus 283 ~ell~hp~~~~~ 294 (336)
T 3fhr_A 283 TQFMNHPWINQS 294 (336)
T ss_dssp HHHHHSHHHHTG
T ss_pred HHHhcCcccccc
Confidence 999999998753
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-37 Score=345.29 Aligned_cols=247 Identities=23% Similarity=0.299 Sum_probs=202.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|.++.++..||+|++... ....+.+.+|+.+++.++||||+++++++..
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------- 80 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-------- 80 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC---STHHHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc--------
Confidence 47899999999999999999999999999999998642 2345778999999999999999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+|||||+ ++|.+++... ..+++..++.++.||+.||+|||
T Consensus 81 --------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 128 (288)
T 3kfa_A 81 --------------------------------EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128 (288)
T ss_dssp --------------------------------SSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH
Confidence 345799999997 5999999864 45999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+||+++.++.+||+|||+++...... ........+|+.|+|||++.+ ..++.++
T Consensus 129 ~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 193 (288)
T 3kfa_A 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--------------YTAHAGAKFPIKWTAPESLAY-NKFSIKS 193 (288)
T ss_dssp HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS--------------SEEETTEEECGGGCCHHHHHH-CCCCHHH
T ss_pred HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCc--------------cccccCCccccCcCChhhhcc-CCCCchh
Confidence 9999999999999999999999999999998653221 011234567889999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||||||+++|+|++ ||........... +. ....++.....++.+.+||++||+.||.+|||+.++++.
T Consensus 194 Di~slG~il~~ll~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~ 265 (288)
T 3kfa_A 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-LE-KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 265 (288)
T ss_dssp HHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH-HH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-Hh-ccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHH
Confidence 99999999999996 6654433332222 22 222233334567899999999999999999999999874
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-37 Score=348.66 Aligned_cols=256 Identities=20% Similarity=0.253 Sum_probs=196.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc---CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKL---DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~---~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
.++|.+.+.||+|+||.||+|.+.. ++..||||+++...........+.+|+.+++.++||||+++++++.+...
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~-- 110 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS-- 110 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc--
Confidence 4689999999999999999998875 45689999998766666666789999999999999999999998854310
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHh------hcCCCCHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFE------SYDHFDKELAWHLFRQIV 529 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~------~~~~l~e~~~~~i~~qIa 529 (1196)
......|+|||||+ ++|.+++. ....+++..++.++.||+
T Consensus 111 ---------------------------------~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~ 157 (313)
T 3brb_A 111 ---------------------------------QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157 (313)
T ss_dssp -------------------------------------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHH
Confidence 11235799999997 59999884 235699999999999999
Q ss_pred HHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 530 EGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 530 ~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
.||+|||++||+||||||+|||++.++.+||+|||+++....... ........+++.|+|||++.+
T Consensus 158 ~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~- 223 (313)
T 3brb_A 158 LGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDY-------------YRQGRIAKMPVKWIAIESLAD- 223 (313)
T ss_dssp HHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC-----------------------------CCGGGSCHHHHHS-
T ss_pred HHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCcceecccccc-------------cCcccccCCCccccCchhhcC-
Confidence 999999999999999999999999999999999999986532211 111234467889999999987
Q ss_pred CCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 610 PKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
..++.++|||||||++|+|++ ||............. ....++.....++.+.++|.+||+.||.+|||+.++++
T Consensus 224 ~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 301 (313)
T 3brb_A 224 RVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLL--HGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRL 301 (313)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH--TTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred CCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHH--cCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 578999999999999999997 666544433333222 22233444566789999999999999999999999997
Q ss_pred c
Q 000993 686 D 686 (1196)
Q Consensus 686 ~ 686 (1196)
+
T Consensus 302 ~ 302 (313)
T 3brb_A 302 Q 302 (313)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-37 Score=349.91 Aligned_cols=250 Identities=21% Similarity=0.285 Sum_probs=203.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.++|++.+.||+|+||.||+|+++ .+++.||||++... ........+.+|+.+++.++||||+++++++.+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--- 99 (322)
T 1p4o_A 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ--- 99 (322)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT-SCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS---
T ss_pred hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccc-cCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEcc---
Confidence 468999999999999999999987 35789999998643 333455678999999999999999999988732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------CCCCHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------DHFDKELAWH 523 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------~~l~e~~~~~ 523 (1196)
....|+|||||+ ++|.+++... ..+++..++.
T Consensus 100 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 142 (322)
T 1p4o_A 100 -------------------------------------GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 142 (322)
T ss_dssp -------------------------------------SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHH
T ss_pred -------------------------------------CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHH
Confidence 234689999997 5999998653 4579999999
Q ss_pred HHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCc
Q 000993 524 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 603 (1196)
Q Consensus 524 i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 603 (1196)
++.||+.||+|||++||+||||||+|||++.++.+||+|||+++........ .......||+.|+||
T Consensus 143 i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aP 209 (322)
T 1p4o_A 143 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-------------RKGGKGLLPVRWMSP 209 (322)
T ss_dssp HHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCE-------------EGGGSSEECGGGCCH
T ss_pred HHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCcccccccccccc-------------ccccCCCCCCCccCh
Confidence 9999999999999999999999999999999999999999999865432210 112345678999999
Q ss_pred hhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC
Q 000993 604 EIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 679 (1196)
Q Consensus 604 E~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt 679 (1196)
|++.+ ..++.++|||||||++|||++ ||......+...... ....++.....++.+.+||.+||+.||.+|||
T Consensus 210 E~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 286 (322)
T 1p4o_A 210 ESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM--EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPS 286 (322)
T ss_dssp HHHHH-CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred hhhcc-CCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHH--cCCcCCCCCCCCHHHHHHHHHHcCCCcccCcC
Confidence 99987 568999999999999999986 676555444433322 23333344566788999999999999999999
Q ss_pred HHHHHhc
Q 000993 680 ATELLQD 686 (1196)
Q Consensus 680 a~eiL~~ 686 (1196)
+.+++++
T Consensus 287 ~~e~l~~ 293 (322)
T 1p4o_A 287 FLEIISS 293 (322)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999986
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-37 Score=368.54 Aligned_cols=241 Identities=24% Similarity=0.390 Sum_probs=198.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|.+. |+.||||+++... ..+.+.+|+.+|+.++|||||++++++.+.
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------- 258 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEE------- 258 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECT-------
T ss_pred hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcC-------
Confidence 478999999999999999999886 8899999987432 346789999999999999999999987432
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~--l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+|||||+ |+|.+++...+. +++..++.++.||+.||+|||
T Consensus 259 --------------------------------~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH 306 (450)
T 1k9a_A 259 --------------------------------KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 306 (450)
T ss_dssp --------------------------------TSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 235799999996 599999987654 799999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++
T Consensus 307 ~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~------------------~~~~~~~~~y~aPE~~~~-~~~~~~s 367 (450)
T 1k9a_A 307 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST------------------QDTGKLPVKWTAPEALRE-KKFSTKS 367 (450)
T ss_dssp HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC------------------------CCCTTTSCHHHHHS-SCCCHHH
T ss_pred hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc------------------ccCCCCCcceeCHHHhcC-CCCCcHH
Confidence 999999999999999999999999999999743211 122367889999999987 5799999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||||||+||||++ ||......+..... . .+..++.....++.+.+||.+||+.||.+|||+.++++.
T Consensus 368 DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i-~-~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~ 439 (450)
T 1k9a_A 368 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-E-KGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQ 439 (450)
T ss_dssp HHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHH-H-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-H-cCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 99999999999996 77655444333322 2 222333445667899999999999999999999999863
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=356.32 Aligned_cols=249 Identities=20% Similarity=0.272 Sum_probs=196.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcE----EEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRH----YAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~----vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.++|++++.||+|+||+||+|++..+++. ||+|.+.... .......+.+|+.+++.++||||+++++++.
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~----- 85 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP----- 85 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT-SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-----
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc-cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-----
Confidence 47899999999999999999999888876 7777765332 2222345778999999999999999998762
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~ 533 (1196)
...+++|||||+ ++|.+++... ..+++..++.++.||+.||+
T Consensus 86 ------------------------------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~ 129 (325)
T 3kex_A 86 ------------------------------------GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMY 129 (325)
T ss_dssp ------------------------------------BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHH
Confidence 234689999997 6999988764 57999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+|||++.++++||+|||+++....... ........||+.|+|||++.+ ..++
T Consensus 130 ~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~ 195 (325)
T 3kex_A 130 YLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK-------------QLLYSEAKTPIKWMALESIHF-GKYT 195 (325)
T ss_dssp HHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTT-------------CCC-----CCTTTSCHHHHHH-CCCC
T ss_pred HHHhCCCCCCccchheEEECCCCeEEECCCCcccccCcccc-------------cccccCCCCcccccChHHhcc-CCCC
Confidence 99999999999999999999999999999999987532210 111234578889999999987 5689
Q ss_pred CcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++|||||||++|||++ ||......+...... ....+......++++.++|.+||+.||.+|||+.+++++
T Consensus 196 ~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~ 270 (325)
T 3kex_A 196 HQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE--KGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANE 270 (325)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHH--TTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred hhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHH--cCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999999986 776554433322222 222222223345678899999999999999999999986
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-37 Score=352.00 Aligned_cols=253 Identities=28% Similarity=0.447 Sum_probs=204.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEE----ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKN----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~----~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.++|++.+.||+|+||.||+|++ ..+++.||||++... .....+.+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--- 96 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGP--- 96 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS---
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC--CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC---
Confidence 47899999999999999999994 568999999998643 334556799999999999999999999887431
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
....+|+|||||+ ++|.+++.. ...+++..++.++.||+.||+
T Consensus 97 -----------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~ 141 (327)
T 3lxl_A 97 -----------------------------------GRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGME 141 (327)
T ss_dssp -----------------------------------SSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHH
Confidence 2456899999995 699999976 456999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+|||++.++.+||+|||+++...... ..........||+.|+|||++.+ ..++
T Consensus 142 ~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~------------~~~~~~~~~~~~~~y~aPE~~~~-~~~~ 208 (327)
T 3lxl_A 142 YLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK------------DYYVVREPGQSPIFWYAPESLSD-NIFS 208 (327)
T ss_dssp HHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTC------------SEEECSSCCCSCGGGSCHHHHHH-CEEE
T ss_pred HHHhCCccCCCCChhhEEECCCCCEEEcccccceecccCC------------ccceeeccCCccccccCHHHhcc-CCCC
Confidence 9999999999999999999999999999999998653221 01112344578999999999987 5689
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHHH--------------HHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMERQ--------------IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 676 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~~--------------~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~ 676 (1196)
.++|||||||++|+|++ ||....... .....+ .....++.....++.+.+||++||+.||.+
T Consensus 209 ~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dP~~ 287 (327)
T 3lxl_A 209 RQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL-EEGQRLPAPPACPAEVHELMKLCWAPSPQD 287 (327)
T ss_dssp HHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHH-HTTCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred hHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHh-hcccCCCCCCcccHHHHHHHHHHcCCChhh
Confidence 99999999999999997 554333221 111122 233334444567789999999999999999
Q ss_pred CCCHHHHHhc
Q 000993 677 RPSATELLQD 686 (1196)
Q Consensus 677 RPta~eiL~~ 686 (1196)
|||+.+++++
T Consensus 288 Rps~~ell~~ 297 (327)
T 3lxl_A 288 RPSFSALGPQ 297 (327)
T ss_dssp SCCHHHHHHH
T ss_pred CcCHHHHHHH
Confidence 9999999875
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-37 Score=345.10 Aligned_cols=250 Identities=25% Similarity=0.362 Sum_probs=192.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
-++|++.++||+|+||.||+|++. ..||||+++.........+.+.+|+.+++.++||||+++++++.
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------- 90 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST--------- 90 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC---------
T ss_pred ccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc---------
Confidence 468999999999999999999865 35999999876666666788999999999999999999997541
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+++|||||+ ++|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 91 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~ 138 (289)
T 3og7_A 91 --------------------------------APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138 (289)
T ss_dssp --------------------------------SSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 234689999997 599998864 4569999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--CCCCCCc
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEK 615 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~s~k 615 (1196)
+||+||||||+|||++.++.+||+|||+++....... ........||+.|+|||++.. ...++.+
T Consensus 139 ~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 205 (289)
T 3og7_A 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG-------------SHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205 (289)
T ss_dssp TTCCCSCCCGGGEEEETTTEEEECCCC-------------------------------CCCTTCCHHHHC----CCSCHH
T ss_pred CCcccccCccceEEECCCCCEEEccceeccccccccc-------------cccccccCCCccccCchhhcccCCCCCCcc
Confidence 9999999999999999999999999999976432110 011234579999999999862 2457889
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC---CCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL---PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~---p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||||||++|||++ ||................... +......++.+.+||.+||+.||.+|||+.++++.
T Consensus 206 ~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 282 (289)
T 3og7_A 206 SDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAE 282 (289)
T ss_dssp HHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 999999999999996 887655544444443322221 12233567889999999999999999999999874
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-37 Score=346.49 Aligned_cols=253 Identities=23% Similarity=0.373 Sum_probs=193.2
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHh--cCCCCeeeeeeeeeecCccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR--LQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~--L~HpnIV~l~~~~~e~~~~~ 456 (1196)
..++|++.+.||+|+||+||+|++ +|+.||||++... ....+.+|.+++.. ++||||+++++++....
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~--- 75 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSR--- 75 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEE---
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeecccc---
Confidence 457999999999999999999988 5999999998632 34556677777776 79999999999875421
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
.....+|+|||||+ ++|.+++.. ..+++..++.++.||+.||+||
T Consensus 76 ---------------------------------~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~l 121 (301)
T 3q4u_A 76 ---------------------------------HSSTQLWLITHYHEMGSLYDYLQL-TTLDTVSCLRIVLSIASGLAHL 121 (301)
T ss_dssp ---------------------------------TTEEEEEEEECCCTTCBHHHHHTT-CCBCHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCCceeEEehhhccCCCHHHHHhh-cccCHHHHHHHHHHHHHHHHHH
Confidence 22457899999997 599999954 5799999999999999999999
Q ss_pred H--------hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 536 H--------GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 536 H--------s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
| ++||+||||||+|||++.++.+||+|||+|+........ .........||+.|+|||++.
T Consensus 122 H~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-----------~~~~~~~~~gt~~y~aPE~~~ 190 (301)
T 3q4u_A 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ-----------LDVGNNPRVGTKRYMAPEVLD 190 (301)
T ss_dssp HSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTE-----------EECCCCCCCCCGGGCCHHHHT
T ss_pred HHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeeccccccc-----------ccccccccccccceeChhhhc
Confidence 9 999999999999999999999999999999765432111 011223458999999999998
Q ss_pred CCC-----CCCCcchhHHHHHHHHHhhc-------------CCchhH----HHHHHHHHhhhcCCC---CCcc--ccCCH
Q 000993 608 GWP-----KIDEKADMYSLGIVFFELWH-------------PFSTAM----ERQIVLSDLKQKGEL---PPSW--VAKFS 660 (1196)
Q Consensus 608 ~~~-----~~s~ksDVwSlGviLyELlt-------------Pf~~~~----~~~~~~~~l~~~~~~---p~~~--~~~~~ 660 (1196)
+.. .++.++|||||||++|||++ ||.... ............... |..+ ...++
T Consensus 191 ~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (301)
T 3q4u_A 191 ETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLT 270 (301)
T ss_dssp TCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHH
T ss_pred CcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHH
Confidence 742 23478999999999999985 443221 112222222222222 2211 11335
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 661 EQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 661 ~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.+.+||++||+.||.+|||+.++++.
T Consensus 271 ~l~~li~~cl~~dP~~Rps~~~i~~~ 296 (301)
T 3q4u_A 271 SLAKLMKECWYQNPSARLTALRIKKT 296 (301)
T ss_dssp HHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 78999999999999999999999874
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=337.59 Aligned_cols=245 Identities=22% Similarity=0.377 Sum_probs=201.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||+|+||.||+|.+. +++.||+|++...... .+.+.+|+.+++.++||||+++++++.+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 74 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLE--------- 74 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBC---HHHHHHHHHHHHTCCCTTBCCEEEEECS---------
T ss_pred hheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEcc---------
Confidence 68999999999999999999997 7889999999754332 4678999999999999999999998732
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|++|||++ ++|.+++... ..+++..++.++.||+.||+|||++
T Consensus 75 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 123 (267)
T 3t9t_A 75 -------------------------------QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 123 (267)
T ss_dssp -------------------------------SSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -------------------------------CCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC
Confidence 234699999996 5999999765 5699999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+||+++.++.+||+|||+++....... .......+|+.|+|||++.+ ..++.++||
T Consensus 124 ~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di 188 (267)
T 3t9t_A 124 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY--------------TSSTGTKFPVKWASPEVFSF-SRYSSKSDV 188 (267)
T ss_dssp TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH--------------HSTTSTTCCGGGCCHHHHHH-CCCCHHHHH
T ss_pred CcccCCCchheEEECCCCCEEEcccccccccccccc--------------cccccccccccccChhhhcC-CCccchhch
Confidence 999999999999999999999999999986532211 11233467889999999987 568999999
Q ss_pred HHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 619 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 619 wSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||||+++|+|++ ||......+........ ..+......++.+.++|.+||+.||.+|||+.+++++
T Consensus 189 ~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 258 (267)
T 3t9t_A 189 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG--FRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 258 (267)
T ss_dssp HHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT--CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcC--CcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 999999999986 77665554444333222 2222233456789999999999999999999999975
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-37 Score=352.36 Aligned_cols=251 Identities=22% Similarity=0.307 Sum_probs=202.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCc-----EEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGR-----HYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~-----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~ 453 (1196)
.++|++.+.||+|+||.||+|.+..+++ .||+|++.... .......+.+|+.+++.+ +||||++++++|.+
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-- 121 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGACTH-- 121 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec--
Confidence 4789999999999999999999987664 79999987433 334567799999999999 89999999998732
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc--------------CCCCH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--------------DHFDK 518 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~--------------~~l~e 518 (1196)
...+|+|||||++ +|.+++... ..+++
T Consensus 122 --------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 163 (333)
T 2i1m_A 122 --------------------------------------GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAST 163 (333)
T ss_dssp --------------------------------------SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCH
T ss_pred --------------------------------------CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCH
Confidence 2346999999975 999998643 35899
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccc
Q 000993 519 ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTY 598 (1196)
Q Consensus 519 ~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~ 598 (1196)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... ........||+
T Consensus 164 ~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~~~~ 230 (333)
T 2i1m_A 164 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN-------------YIVKGNARLPV 230 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTT-------------SEECSSCEECG
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECccccccccccccc-------------eeecCCCCCCc
Confidence 99999999999999999999999999999999999999999999999986532210 01123456789
Q ss_pred cCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCC
Q 000993 599 FYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 674 (1196)
Q Consensus 599 ~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP 674 (1196)
.|+|||++.+ ..++.++|||||||++|||++ ||................ ..++.....++.+.+||.+||+.||
T Consensus 231 ~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p 308 (333)
T 2i1m_A 231 KWMAPESIFD-CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDG-YQMAQPAFAPKNIYSIMQACWALEP 308 (333)
T ss_dssp GGSCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHT-CCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred cccCHHHhcc-CCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHhccCh
Confidence 9999999987 568999999999999999996 776544333333333322 2222333456789999999999999
Q ss_pred CCCCCHHHHHhc
Q 000993 675 SDRPSATELLQD 686 (1196)
Q Consensus 675 ~~RPta~eiL~~ 686 (1196)
.+|||+.+++++
T Consensus 309 ~~Rps~~~l~~~ 320 (333)
T 2i1m_A 309 THRPTFQQICSF 320 (333)
T ss_dssp GGSCCHHHHHHH
T ss_pred hhCcCHHHHHHH
Confidence 999999999874
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=342.84 Aligned_cols=256 Identities=24% Similarity=0.254 Sum_probs=200.2
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++.+.||+|+||.||+|++..+|+.||||++...... ..+.+|+.+++.++|++++..+..+..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~~~~~i~~~~~~~~------- 75 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGA------- 75 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC----CHHHHHHHHHHHHTTSTTCCCEEEEEE-------
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch----hHHHHHHHHHHHhhcCCCCCccccccC-------
Confidence 357899999999999999999999999999999998754332 358899999999999998877765532
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
.....|+||||++++|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 76 --------------------------------~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 123 (296)
T 3uzp_A 76 --------------------------------EGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 123 (296)
T ss_dssp --------------------------------ETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCCceEEEEEecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2456799999998899999974 4579999999999999999999999
Q ss_pred CCCcccCCCcCcEEe---cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 538 QGIIHRDLTPNNIFF---DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 538 ~gIiHrDLKp~NILl---d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
+||+||||||+|||+ +.++.+||+|||+++............ ........||+.|+|||++.+ ..++.
T Consensus 124 ~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~~-~~~~~ 194 (296)
T 3uzp_A 124 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIP--------YRENKNLTGTARYASINTHLG-IEQSR 194 (296)
T ss_dssp TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCC--------CCCSCCCCSCTTTCCHHHHTT-CCCCH
T ss_pred CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccc--------cccccccccccccCChhhhcC-CCCCc
Confidence 999999999999999 478999999999998754332111000 012345689999999999988 56899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHH---HHHHHHHhhhcCCCC--CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 615 KADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQKGELP--PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~---~~~~~~~l~~~~~~p--~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++|||||||++|||++ ||..... .+............+ ......++++.+||++||+.||.+|||+.++++.
T Consensus 195 ~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 274 (296)
T 3uzp_A 195 RDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQL 274 (296)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHH
T ss_pred chhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHH
Confidence 9999999999999996 7764211 111111111111111 1223456789999999999999999999999863
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=349.41 Aligned_cols=249 Identities=23% Similarity=0.342 Sum_probs=199.8
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEE--EEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY--AVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~v--AVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~ 454 (1196)
...++|++.+.||+|+||.||+|+++.+|..+ |||.+... ........+.+|+.+++.+ +||||+++++++.+
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~--- 97 (327)
T 1fvr_A 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH--- 97 (327)
T ss_dssp CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEE---
T ss_pred ccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccc-cchHHHHHHHHHHHHHHhccCCCchhhhceeeee---
Confidence 34589999999999999999999999888865 99988642 2333456789999999999 99999999998733
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----------------CCC
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HFD 517 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l~ 517 (1196)
...+|+|||||+ ++|.+++.... .++
T Consensus 98 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 140 (327)
T 1fvr_A 98 -------------------------------------RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 140 (327)
T ss_dssp -------------------------------------TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSC
T ss_pred -------------------------------------CCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCC
Confidence 356899999996 59999997654 699
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcccc
Q 000993 518 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 597 (1196)
Q Consensus 518 e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT 597 (1196)
+..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..... .......+|
T Consensus 141 ~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~----------------~~~~~~~~~ 204 (327)
T 1fvr_A 141 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY----------------VKKTMGRLP 204 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEE----------------CCC----CC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCcccccc----------------ccccCCCCC
Confidence 9999999999999999999999999999999999999999999999999743211 112334678
Q ss_pred ccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCC
Q 000993 598 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 673 (1196)
Q Consensus 598 ~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~d 673 (1196)
+.|+|||++.+ ..++.++|||||||++|||++ ||......+....... ...+......++.+.+||.+||+.|
T Consensus 205 ~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~d 281 (327)
T 1fvr_A 205 VRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ--GYRLEKPLNCDDEVYDLMRQCWREK 281 (327)
T ss_dssp TTTCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGG--TCCCCCCTTBCHHHHHHHHHHTCSS
T ss_pred ccccChhhhcc-ccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhc--CCCCCCCCCCCHHHHHHHHHHccCC
Confidence 89999999987 568999999999999999995 7766555444333222 2223333456789999999999999
Q ss_pred CCCCCCHHHHHhc
Q 000993 674 PSDRPSATELLQD 686 (1196)
Q Consensus 674 P~~RPta~eiL~~ 686 (1196)
|.+|||+.+++++
T Consensus 282 p~~Rps~~ell~~ 294 (327)
T 1fvr_A 282 PYERPSFAQILVS 294 (327)
T ss_dssp GGGSCCHHHHHHH
T ss_pred hhhCcCHHHHHHH
Confidence 9999999999976
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-37 Score=367.99 Aligned_cols=256 Identities=29% Similarity=0.400 Sum_probs=191.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.+|.+.+.||+|+||+||. ....+|+.||||++..... ..+.+|+.+|+.+ +|||||++++++.+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~~-------- 89 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEKD-------- 89 (432)
T ss_dssp EEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEEE--------
T ss_pred EEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEec--------
Confidence 3689999999999999764 4455899999999864322 2356899999999 89999999988732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|||||||+|+|.+++.... .+.+..++.++.||+.||+|||++
T Consensus 90 --------------------------------~~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 137 (432)
T 3p23_A 90 --------------------------------RQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL 137 (432)
T ss_dssp --------------------------------TTEEEEEEECCSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCEEEEEEECCCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC
Confidence 45689999999999999997654 466667789999999999999999
Q ss_pred CCcccCCCcCcEEecC---C--CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--CCC
Q 000993 539 GIIHRDLTPNNIFFDA---R--NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPK 611 (1196)
Q Consensus 539 gIiHrDLKp~NILld~---~--~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~ 611 (1196)
||+||||||+|||++. + ..+||+|||+|+........ .......+||+.|+|||++.+ ...
T Consensus 138 ~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~------------~~~~~~~~gt~~y~APE~l~~~~~~~ 205 (432)
T 3p23_A 138 NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS------------FSRRSGVPGTEGWIAPEMLSEDCKEN 205 (432)
T ss_dssp TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------------------CCSCTTSCCGGGTSCC---C
T ss_pred cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcc------------eeeccccCCCcCccChhhhhcccccC
Confidence 9999999999999953 2 35889999999865422100 012245679999999999974 245
Q ss_pred CCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 612 IDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
++.++|||||||++|||++ ||..........................++.+.+||.+||+.||.+|||+.++++||
T Consensus 206 ~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp 285 (432)
T 3p23_A 206 PTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHP 285 (432)
T ss_dssp CCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTST
T ss_pred CCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCc
Confidence 7889999999999999997 675544433322111111111111122234678999999999999999999999999
Q ss_pred CCCCchH
Q 000993 688 LPPQMEY 694 (1196)
Q Consensus 688 ~~~~~~~ 694 (1196)
||....+
T Consensus 286 ~f~~~~~ 292 (432)
T 3p23_A 286 FFWSLEK 292 (432)
T ss_dssp TTCCHHH
T ss_pred cccChHH
Confidence 9998765
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=342.51 Aligned_cols=252 Identities=20% Similarity=0.231 Sum_probs=199.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
-.|...+.||+|+||+||+|.+..+++ .||+|++.. .......+.+.+|+.+++.++||||+++++++.+.
T Consensus 21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 94 (298)
T 3pls_A 21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSR-ITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPP----- 94 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETT-CCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS-----
T ss_pred eEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccc-cccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecC-----
Confidence 356778999999999999999875554 799999864 23334567889999999999999999999987432
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
....+++|||+. ++|.+++.. ...+++..++.++.||+.||+||
T Consensus 95 ----------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L 140 (298)
T 3pls_A 95 ----------------------------------EGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL 140 (298)
T ss_dssp ----------------------------------SSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHH
Confidence 223489999995 699999976 45689999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+|||++.++.+||+|||+++......... ........+|+.|+|||++.+ ..++.+
T Consensus 141 H~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~-----------~~~~~~~~~~~~y~aPE~~~~-~~~~~~ 208 (298)
T 3pls_A 141 AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYS-----------VQQHRHARLPVKWTALESLQT-YRFTTK 208 (298)
T ss_dssp HHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGC-----------SCCSSCTTCGGGGSCHHHHTT-CCCCHH
T ss_pred HhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccc-----------cccCcCCCCCccccChhhhcc-CCCChh
Confidence 99999999999999999999999999999998654322111 112234578999999999987 568999
Q ss_pred chhHHHHHHHHHhhc---C-CchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 616 ADMYSLGIVFFELWH---P-FSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt---P-f~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||||||++|+|++ | |........ ...+. ....++.....++.+.++|++||+.||.+|||+.++++.
T Consensus 209 ~Di~slG~il~~l~~g~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 281 (298)
T 3pls_A 209 SDVWSFGVLLWELLTRGAPPYRHIDPFDL-THFLA-QGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGE 281 (298)
T ss_dssp HHHHHHHHHHHHHHHTSCCTTTTSCGGGH-HHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hchhhHHHHHHHHhhCCCCCCccCCHHHH-HHHhh-cCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 999999999999996 4 333332222 22222 222333344567789999999999999999999999964
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=352.93 Aligned_cols=266 Identities=13% Similarity=0.252 Sum_probs=198.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc--------CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeec
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKL--------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFET 452 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~--------~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~ 452 (1196)
++|.+.+.||+|+||.||+|++.. +++.||||++... ..+.+|+.+++.++||||+++++.+...
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~~ 114 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYST 114 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTTC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhccC
Confidence 789999999999999999999987 4889999998743 3578999999999999999976554211
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhc--CCCCHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIVE 530 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~qIa~ 530 (1196)
.... ...+.+. .......+|+|||||+++|.+++... ..+++..++.++.||+.
T Consensus 115 ~~~~-----------------------i~~~~~~-~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~ 170 (352)
T 2jii_A 115 PLLA-----------------------IPTCMGF-GVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLD 170 (352)
T ss_dssp TTCS-----------------------CCCCCEE-EEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHH
T ss_pred CccC-----------------------ccchhhc-cccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHH
Confidence 0000 0000000 00124678999999977999999876 78999999999999999
Q ss_pred HHHHHHhCCCcccCCCcCcEEecCCC--CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC
Q 000993 531 GLAHIHGQGIIHRDLTPNNIFFDARN--DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 608 (1196)
Q Consensus 531 gL~yLHs~gIiHrDLKp~NILld~~~--~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 608 (1196)
||+|||++||+||||||+|||++.++ .+||+|||+++.+......... .........||+.|+|||++.+
T Consensus 171 ~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~--------~~~~~~~~~gt~~y~aPE~~~~ 242 (352)
T 2jii_A 171 ALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAY--------VEGSRSPHEGDLEFISMDLHKG 242 (352)
T ss_dssp HHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCC--------CTTSSCTTCSCTTTCCHHHHTT
T ss_pred HHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccc--------cccccccccCCccccCHHHHcc
Confidence 99999999999999999999999998 8999999999876433211100 0112244589999999999988
Q ss_pred CCCCCCcchhHHHHHHHHHhhc---CCchhH-HHHHHHHHh---hhcC-CCC---CccccCCHHHHHHHHHcccCCCCCC
Q 000993 609 WPKIDEKADMYSLGIVFFELWH---PFSTAM-ERQIVLSDL---KQKG-ELP---PSWVAKFSEQESLLRRLMSPSPSDR 677 (1196)
Q Consensus 609 ~~~~s~ksDVwSlGviLyELlt---Pf~~~~-~~~~~~~~l---~~~~-~~p---~~~~~~~~~l~~LI~~cL~~dP~~R 677 (1196)
..++.++|||||||+||||++ ||.... ......... .... .++ ..+...++++.+||.+||+.||.+|
T Consensus 243 -~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 321 (352)
T 2jii_A 243 -CGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEK 321 (352)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCC
T ss_pred -CCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhC
Confidence 568999999999999999997 887653 222111111 1111 111 1223457899999999999999999
Q ss_pred CCHHHHHhc
Q 000993 678 PSATELLQD 686 (1196)
Q Consensus 678 Pta~eiL~~ 686 (1196)
||+.++++.
T Consensus 322 ps~~~l~~~ 330 (352)
T 2jii_A 322 PPYAMLRNN 330 (352)
T ss_dssp CCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 999999864
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-36 Score=347.67 Aligned_cols=262 Identities=25% Similarity=0.350 Sum_probs=200.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|++..+|+.||||++... .....+.+.+|+.+++.++||||+++++++....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------ 99 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH--EQQDREEAQREADMHRLFNHPNILRLVAYCLRER------ 99 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEE------
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC--CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEecc------
Confidence 36799999999999999999999999999999998653 3345678899999999999999999999885321
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh----cCCCCHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
.....+|+|||||.+ +|.+++.. ...+++..++.++.||+.||+|
T Consensus 100 ------------------------------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~ 149 (317)
T 2buj_A 100 ------------------------------GAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEA 149 (317)
T ss_dssp ------------------------------TTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------CCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 124578999999975 99998875 4679999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC--CC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP--KI 612 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~~ 612 (1196)
||++||+||||||+|||++.++.+||+|||+++............ ..........||+.|+|||++.+.. .+
T Consensus 150 LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 223 (317)
T 2buj_A 150 IHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQA------LTLQDWAAQRCTISYRAPELFSVQSHCVI 223 (317)
T ss_dssp HHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHH------HHHHHHHHHHSCGGGCCGGGSSCCSEEEE
T ss_pred HHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhccccccccccc------ccccccccccCCcccCCHhHhccCCCcCC
Confidence 999999999999999999999999999999987543211000000 0000112346799999999987632 26
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHH-HHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQ-IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~-~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+.++|||||||++|||++ ||....... ....... .....+.....++.+.+||.+||+.||.+|||+.+++++
T Consensus 224 ~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 300 (317)
T 2buj_A 224 DERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ-NQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ 300 (317)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHH-CC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhh-ccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 899999999999999997 665432211 1111111 222233344567899999999999999999999999986
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-37 Score=350.18 Aligned_cols=264 Identities=25% Similarity=0.393 Sum_probs=185.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.+|++.+.||+|+||.||+|++..+|+.||||++... .......+.+|+.+++.+. ||||+++++++.....
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~----- 100 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKE----- 100 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTT-----
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC--chHHHHHHHHHHHHHHHhccCCChhhcccccccccc-----
Confidence 4799999999999999999999999999999998643 3345667899999999996 9999999998853210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES---YDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~---~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
........+|++||||+|+|.+++.. ...+++..++.++.||+.||+|||
T Consensus 101 ---------------------------~~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH 153 (337)
T 3ll6_A 101 ---------------------------ESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH 153 (337)
T ss_dssp ---------------------------TSTTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------ccccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 01123567899999999999998864 456999999999999999999999
Q ss_pred hCC--CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc--CCCCC
Q 000993 537 GQG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ--GWPKI 612 (1196)
Q Consensus 537 s~g--IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~--~~~~~ 612 (1196)
++| |+||||||+|||++.++.+||+|||+++.......... ...............||+.|+|||++. ....+
T Consensus 154 ~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~ 230 (337)
T 3ll6_A 154 RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSW---SAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPI 230 (337)
T ss_dssp TSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC----------------------------------CCTTSCS
T ss_pred hCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcccc---cccccccchhhccccCCCCcCChhhhhccccCCC
Confidence 999 99999999999999999999999999986543211000 000000011123457999999999984 22458
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+.++|||||||++|||++ ||......... ...... +.....++.+.+||++||+.||.+|||+.+++++
T Consensus 231 ~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 302 (337)
T 3ll6_A 231 GEKQDIWALGCILYLLCFRQHPFEDGAKLRIV----NGKYSI-PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ 302 (337)
T ss_dssp SHHHHHHHHHHHHHHHHHSSCCC----------------CCC-CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred ChHHhHHHHHHHHHHHHhCCCCCcchhHHHhh----cCcccC-CcccccchHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 899999999999999997 77654333221 111122 2223445578899999999999999999999986
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=341.61 Aligned_cols=255 Identities=24% Similarity=0.250 Sum_probs=196.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|++..+++.||||++...... ..+.+|+.+++.++|+|++..+..+..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~~~~~i~~~~~~~~-------- 75 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGA-------- 75 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C----CCHHHHHHHHHHHTTSTTCCCEEEEEE--------
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc----hHHHHHHHHHHHhcCCCCCCeeeeecC--------
Confidence 47899999999999999999999999999999987654332 347889999999999998888766632
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
.....++|||||+++|.+++.. ...+++..++.++.||+.||+|||++
T Consensus 76 -------------------------------~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~ 124 (296)
T 4hgt_A 76 -------------------------------EGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 124 (296)
T ss_dssp -------------------------------ETTEEEEEEECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -------------------------------CCCceEEEEEccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2456799999998899999974 45799999999999999999999999
Q ss_pred CCcccCCCcCcEEe---cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 539 GIIHRDLTPNNIFF---DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 539 gIiHrDLKp~NILl---d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
||+||||||+|||+ +.++.+||+|||+++............ ........||+.|+|||++.+ ..++.+
T Consensus 125 ~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~~-~~~~~~ 195 (296)
T 4hgt_A 125 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIP--------YRENKNLTGTARYASINTHLG-IEQSRR 195 (296)
T ss_dssp TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCC--------CCCSCCCCSCGGGCCHHHHTT-CCCCHH
T ss_pred CeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCC--------CCcccccCCCccccchHHhcC-CCCCch
Confidence 99999999999999 788999999999998764332111000 012345689999999999998 568999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHH---HHHHHHhhhcCCCC--CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMER---QIVLSDLKQKGELP--PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~---~~~~~~l~~~~~~p--~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||||||++|+|++ ||...... .............+ ......++++.+||.+||+.||.+|||+.++++.
T Consensus 196 ~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~ 274 (296)
T 4hgt_A 196 DDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQL 274 (296)
T ss_dssp HHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHH
Confidence 999999999999996 77642211 11111111111111 1223456789999999999999999999999863
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=343.93 Aligned_cols=252 Identities=20% Similarity=0.241 Sum_probs=198.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.+|++.+.||+|+||+||+|++..+ +..+|+|.+.. .........+.+|+.+++.++||||+++++++.+.
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 98 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS----- 98 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETT-CCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS-----
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEeccc-CCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcC-----
Confidence 5799999999999999999997643 33689998864 23444567899999999999999999999886432
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
....|++||||++ +|.+++.. ...+++..++.++.||+.||+||
T Consensus 99 ----------------------------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~l 144 (298)
T 3f66_A 99 ----------------------------------EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 144 (298)
T ss_dssp ----------------------------------SSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH
Confidence 2356899999975 99999975 44689999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+|||++.++.+||+|||+++......... ........||+.|+|||++.+ ..++.+
T Consensus 145 H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~-----------~~~~~~~~~~~~y~aPE~~~~-~~~~~~ 212 (298)
T 3f66_A 145 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS-----------VHNKTGAKLPVKWMALESLQT-QKFTTK 212 (298)
T ss_dssp HHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCB-----------C-----CCBCGGGSCHHHHHH-CCCCHH
T ss_pred HhCCccCCCCchheEEECCCCCEEECcccccccccccchhc-----------cccccCCCCCccccChHHhcC-CCCChH
Confidence 99999999999999999999999999999998654322110 112344578899999999987 568999
Q ss_pred chhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 616 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||||||++|+|++ ||............... ..+......++.+.++|.+||+.||.+|||+.++++.
T Consensus 213 ~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 285 (298)
T 3f66_A 213 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG--RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 285 (298)
T ss_dssp HHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTT--CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcC--CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999997 55544433333333322 2222233456789999999999999999999999974
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-36 Score=347.87 Aligned_cols=252 Identities=20% Similarity=0.287 Sum_probs=196.7
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCC----cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDG----RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
..++|.+.+.||+|+||.||+|.++.++ ..||||+++.. ........+.+|+.+++.++||||+++++++..
T Consensus 42 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 117 (333)
T 1mqb_A 42 HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG-YTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK--- 117 (333)
T ss_dssp CTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS---
T ss_pred ChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec---
Confidence 3478999999999999999999987553 46999998743 233455678999999999999999999988732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc-CCCCHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qIa~gL 532 (1196)
...+|+|||||++ +|.+++... ..+++..++.++.||+.||
T Consensus 118 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL 160 (333)
T 1mqb_A 118 -------------------------------------YKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGM 160 (333)
T ss_dssp -------------------------------------SSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 3457999999975 999999764 5799999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||++||+||||||+|||++.++.+||+|||+++........ ........+|+.|+|||++.+ ..+
T Consensus 161 ~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~ 227 (333)
T 1mqb_A 161 KYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA------------TYTTSGGKIPIRWTAPEAISY-RKF 227 (333)
T ss_dssp HHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------------------CCCGGGSCHHHHHS-CCC
T ss_pred HHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhcccccc------------ccccCCCCccccccCchhccc-CCC
Confidence 9999999999999999999999999999999999865422100 111233457889999999987 568
Q ss_pred CCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 613 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+.++|||||||++|||++ ||......+..... . ....++.....++.+.+||.+||+.||.+||++.+++++
T Consensus 228 ~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~-~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 303 (333)
T 1mqb_A 228 TSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI-N-DGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSI 303 (333)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH-H-TTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred CchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHH-H-CCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999999986 77665554443332 2 222333344567799999999999999999999999875
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-37 Score=342.37 Aligned_cols=248 Identities=23% Similarity=0.316 Sum_probs=197.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
.++|++.+.||+|+||.||+|++..+ +..||+|++... ......+.+.+|+.+++.++||||+++++++.+
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----- 84 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD-CTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE----- 84 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTT-SCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-----
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccc-cCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-----
Confidence 47899999999999999999997643 446999998643 334456789999999999999999999988621
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...|+||||++ ++|.+++... ..+++..++.++.||+.||+|
T Consensus 85 ------------------------------------~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~ 128 (281)
T 3cc6_A 85 ------------------------------------EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAY 128 (281)
T ss_dssp ------------------------------------SSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHH
Confidence 22489999997 5999999765 459999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++.+||+|||+++....... .......+|+.|+|||++.+ ..++.
T Consensus 129 lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~ 193 (281)
T 3cc6_A 129 LESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY--------------YKASVTRLPIKWMSPESINF-RRFTT 193 (281)
T ss_dssp HHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-----------------------CCCCCGGGCCHHHHHH-CCCCH
T ss_pred HHHCCcccCCCccceEEECCCCcEEeCccCCCcccccccc--------------cccccCCCCcceeCchhhcc-CCCCc
Confidence 9999999999999999999999999999999986532210 11233467889999999987 56899
Q ss_pred cchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 615 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 615 ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++|||||||++|||++ ||........... +. ....++.....++.+.++|.+||+.||.+|||+.+++++
T Consensus 194 ~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 267 (281)
T 3cc6_A 194 ASDVWMFAVCMWEILSFGKQPFFWLENKDVIGV-LE-KGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS 267 (281)
T ss_dssp HHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHH-HH-HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhccHHHHHHHHHHHhCCCCCcccCChHHHHHH-Hh-cCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence 9999999999999986 6754333322222 22 222233334567889999999999999999999999976
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=350.68 Aligned_cols=249 Identities=24% Similarity=0.362 Sum_probs=194.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEE----EEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~v----AVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.++|++++.||+|+||.||+|++..+++.+ |+|.+... ........+.+|+.+++.++||||++++++|..
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---- 88 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLT---- 88 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC-SSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES----
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc-cCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec----
Confidence 478999999999999999999998888765 66665432 233456789999999999999999999998742
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
...+++|+|+. ++|.+++.. ...+++..++.++.||+.||+
T Consensus 89 -------------------------------------~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~ 131 (327)
T 3lzb_A 89 -------------------------------------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 131 (327)
T ss_dssp -------------------------------------SSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 12578899986 699999876 456999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+|||++.++.+||+|||+++....... ........||+.|+|||++.+ ..++
T Consensus 132 ~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~-------------~~~~~~~~~t~~y~aPE~~~~-~~~~ 197 (327)
T 3lzb_A 132 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK-------------EYHAEGGKVPIKWMALESILH-RIYT 197 (327)
T ss_dssp HHHHTTCCCSCCCGGGEEEEETTEEEECCTTC-----------------------------CCCGGGSCHHHHHH-CCCC
T ss_pred HHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccc-------------cccccCCCccccccCHHHHcC-CCCC
Confidence 99999999999999999999999999999999987543211 111234467889999999988 5789
Q ss_pred CcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++|||||||++|||++ ||......+... .+. ....++.....++++.+||++||+.||.+|||+.++++.
T Consensus 198 ~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 272 (327)
T 3lzb_A 198 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-ILE-KGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIE 272 (327)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH-HHH-TTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH-HHH-cCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 99999999999999986 776544433322 222 233333444567799999999999999999999999974
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=349.33 Aligned_cols=252 Identities=22% Similarity=0.293 Sum_probs=197.6
Q ss_pred cCCceEEeeeccCCcEEEEEEE-----EccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCK-----NKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~-----~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.++|++.+.||+|+||.||+|+ +..+++.||||++... .......++.+|+.+++.++||||+++++++.+
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 104 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ--- 104 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc-cchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC---
Confidence 4789999999999999999999 5567889999998633 344456689999999999999999999998732
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-------CCCHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-------HFDKELAWHLFR 526 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-------~l~e~~~~~i~~ 526 (1196)
...+|+|||||+ ++|.+++.... .+++..++.++.
T Consensus 105 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~ 147 (327)
T 2yfx_A 105 -------------------------------------SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 147 (327)
T ss_dssp -------------------------------------SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHH
T ss_pred -------------------------------------CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHH
Confidence 234589999995 59999997653 489999999999
Q ss_pred HHHHHHHHHHhCCCcccCCCcCcEEecCC---CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCc
Q 000993 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 603 (1196)
Q Consensus 527 qIa~gL~yLHs~gIiHrDLKp~NILld~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 603 (1196)
||+.||+|||++||+||||||+|||++.+ ..+||+|||+++........ .......||+.|+||
T Consensus 148 qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aP 214 (327)
T 2yfx_A 148 DIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY-------------RKGGCAMLPVKWMPP 214 (327)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC-------------------CCGGGSCGGGCCH
T ss_pred HHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECcccccccccccccc-------------ccCCCcCCCcceeCH
Confidence 99999999999999999999999999844 46999999999865422110 112345689999999
Q ss_pred hhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC
Q 000993 604 EIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 679 (1196)
Q Consensus 604 E~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt 679 (1196)
|++.+ ..++.++|||||||++|+|++ ||.............. ...+......++.+.+||.+||+.||.+|||
T Consensus 215 E~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 291 (327)
T 2yfx_A 215 EAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS--GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 291 (327)
T ss_dssp HHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT--TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred hHhcC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHhcCChhhCcC
Confidence 99987 568999999999999999996 6765544443333222 2233333456779999999999999999999
Q ss_pred HHHHHhccC
Q 000993 680 ATELLQDAL 688 (1196)
Q Consensus 680 a~eiL~~~~ 688 (1196)
+.+++++.+
T Consensus 292 ~~~ll~~l~ 300 (327)
T 2yfx_A 292 FAIILERIE 300 (327)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999753
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=348.97 Aligned_cols=250 Identities=23% Similarity=0.357 Sum_probs=200.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-------cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeee
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNK-------LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFE 451 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~-------~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e 451 (1196)
.++|++.+.||+|+||.||+|++. .++..||||+++.. ........+.+|+.+++.+ +||||++++++|.+
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccC-CcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 378999999999999999999986 45788999998743 3344567799999999999 99999999998732
Q ss_pred cCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----------------
Q 000993 452 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---------------- 514 (1196)
Q Consensus 452 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---------------- 514 (1196)
...+|+|||||+ ++|.+++....
T Consensus 113 ----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~ 152 (334)
T 2pvf_A 113 ----------------------------------------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152 (334)
T ss_dssp ----------------------------------------SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------
T ss_pred ----------------------------------------CCceEEEEECCCCCcHHHHHHHhccccccccccccccccc
Confidence 345699999997 59999997653
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCc
Q 000993 515 HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 594 (1196)
Q Consensus 515 ~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (1196)
.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... .......
T Consensus 153 ~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~-------------~~~~~~~ 219 (334)
T 2pvf_A 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY-------------YKKTTNG 219 (334)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSS-------------EECCSCC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEcccccccccccccc-------------ccccCCC
Confidence 389999999999999999999999999999999999999999999999999986532210 1112344
Q ss_pred cccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 000993 595 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 670 (1196)
Q Consensus 595 ~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL 670 (1196)
.+|+.|+|||++.+ ..++.++|||||||++|||++ ||......+.... +. ....++.....++.+.++|++||
T Consensus 220 ~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~li~~~l 296 (334)
T 2pvf_A 220 RLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL-LK-EGHRMDKPANCTNELYMMMRDCW 296 (334)
T ss_dssp CCCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH-HH-HTCCCCCCTTCCHHHHHHHHHHT
T ss_pred CcccceeChHHhcC-CCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHH-Hh-cCCCCCCCccCCHHHHHHHHHHc
Confidence 67899999999987 568999999999999999986 6765544443322 22 22223333456789999999999
Q ss_pred cCCCCCCCCHHHHHhc
Q 000993 671 SPSPSDRPSATELLQD 686 (1196)
Q Consensus 671 ~~dP~~RPta~eiL~~ 686 (1196)
+.||.+|||+.+++++
T Consensus 297 ~~dp~~Rps~~ell~~ 312 (334)
T 2pvf_A 297 HAVPSQRPTFKQLVED 312 (334)
T ss_dssp CSSGGGSCCHHHHHHH
T ss_pred cCChhhCcCHHHHHHH
Confidence 9999999999999975
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-37 Score=372.92 Aligned_cols=247 Identities=22% Similarity=0.296 Sum_probs=202.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|+++.++..||||+++.... ..+.+.+|+.+|+.++|||||+++++|.+
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~-------- 287 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTR-------- 287 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc---chHHHHHHHHHHHhcCCCCEeeEEEEEec--------
Confidence 3689999999999999999999998899999999874332 35679999999999999999999998732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|||||||+ |+|.+++... ..+++..++.++.||+.||+|||
T Consensus 288 --------------------------------~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH 335 (495)
T 1opk_A 288 --------------------------------EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 335 (495)
T ss_dssp --------------------------------SSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 235699999997 6999999764 45899999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++.+||+|||+++...... ........+|+.|+|||++.+ ..++.++
T Consensus 336 ~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~s 400 (495)
T 1opk_A 336 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--------------YTAHAGAKFPIKWTAPESLAY-NKFSIKS 400 (495)
T ss_dssp HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC--------------EECCTTCCCCGGGCCHHHHHH-CEECHHH
T ss_pred hCCcccCCCChhhEEECCCCcEEEeecccceeccCCc--------------eeecCCCcCCcceeCHhHHhc-CCCCcHH
Confidence 9999999999999999999999999999998653211 111233467889999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||||||+||||++ ||......+... .+. ....++.....++.+.+||.+||+.||.+|||+.++++.
T Consensus 401 DvwSlG~~l~el~t~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~ 472 (495)
T 1opk_A 401 DVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLE-KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 472 (495)
T ss_dssp HHHHHHHHHHHHHTTSCCSSTTCCGGGHHH-HHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHhHHHHHHHHHhCCCCCCCCCCHHHHHH-HHH-cCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 99999999999996 676544333322 222 222233344567899999999999999999999999863
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-36 Score=340.22 Aligned_cols=249 Identities=20% Similarity=0.267 Sum_probs=201.5
Q ss_pred CCceEEe-eeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQ-PLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~-~LG~G~fG~Vy~a~~~--~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
++|.+.+ .||+|+||.||+|.+. .++..||||+++.. ......+.+.+|+.+++.++||||+++++++ +
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~------ 80 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLIGVC-Q------ 80 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-E------
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc-cchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-c------
Confidence 5677777 9999999999999864 46889999999754 3344567899999999999999999999887 1
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
...+|+|||||++ +|.+++... ..+++..++.++.||+.||+||
T Consensus 81 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l 126 (287)
T 1u59_A 81 ----------------------------------AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL 126 (287)
T ss_dssp ----------------------------------SSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHH
Confidence 1236999999975 999998644 5699999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+||+++.++.+||+|||+++........ ........||+.|+|||++.+ ..++.+
T Consensus 127 H~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~ 193 (287)
T 1u59_A 127 EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY------------YTARSAGKWPLKWYAPECINF-RKFSSR 193 (287)
T ss_dssp HHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE------------ECCCCSSCCCGGGCCHHHHHH-CEECHH
T ss_pred HHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcce------------eeccccccccccccCHHHhcc-CCCCch
Confidence 9999999999999999999999999999999865322110 111234467899999999987 568999
Q ss_pred chhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 616 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||||||++|||++ ||......+...... ....++.....++++.++|.+||+.||.+||++.+++++
T Consensus 194 ~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 266 (287)
T 1u59_A 194 SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE--QGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQR 266 (287)
T ss_dssp HHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHh--cCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999996 776655444333222 233333445667899999999999999999999999986
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-36 Score=337.92 Aligned_cols=243 Identities=27% Similarity=0.368 Sum_probs=198.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||+|+||.||+|.+. ++..||||++..... ..+.+.+|+.+++.++||||+++++++.+
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--------- 79 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLVRLYAVVTQ--------- 79 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS---------
T ss_pred HhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcc---cHHHHHHHHHHHHhCCCcCcceEEEEEcC---------
Confidence 68999999999999999999986 677899999875432 34678999999999999999999987621
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHh
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...|+||||++ ++|.+++.... .+++..++.++.||+.||+|||+
T Consensus 80 --------------------------------~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 127 (279)
T 1qpc_A 80 --------------------------------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127 (279)
T ss_dssp --------------------------------SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 23589999996 59999997543 69999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++.+||+|||+++....... .......+|+.|+|||++.+ ..++.++|
T Consensus 128 ~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~D 192 (279)
T 1qpc_A 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY--------------TAREGAKFPIKWTAPEAINY-GTFTIKSD 192 (279)
T ss_dssp TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE--------------ECCTTCCCCTTTSCHHHHHH-CEECHHHH
T ss_pred CCeeccCCCHhhEEEcCCCCEEECCCcccccccCccc--------------ccccCCCCccCccChhhhcc-CCCCchhh
Confidence 9999999999999999999999999999986532210 11233467889999999987 56899999
Q ss_pred hHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 618 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 618 VwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
|||||+++|||++ ||......+....... ...+......++.+.+||.+||+.||.+|||+.++++
T Consensus 193 i~slG~il~el~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 262 (279)
T 1qpc_A 193 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER--GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 262 (279)
T ss_dssp HHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT--TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhc--ccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 9999999999996 7766555444333222 2222333456779999999999999999999999986
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=345.70 Aligned_cols=253 Identities=27% Similarity=0.388 Sum_probs=199.6
Q ss_pred CCc-eEEeeeccCCcEEEEEEEE----ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDF-EELQPLGHGGFGHVVLCKN----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y-~~~~~LG~G~fG~Vy~a~~----~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
++| ++++.||+|+||+||+|.+ ..+|+.||||+++.. ........+.+|+.+|+.++||||+++++++.+.
T Consensus 30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--- 105 (318)
T 3lxp_A 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA--- 105 (318)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET---
T ss_pred HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc-cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecC---
Confidence 344 9999999999999988865 347899999999743 3345567799999999999999999999988542
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+|+|||||+ ++|.+++... .+++..++.++.||+.||+|
T Consensus 106 -----------------------------------~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~i~~~l~~~l~~ 149 (318)
T 3lxp_A 106 -----------------------------------GAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAY 149 (318)
T ss_dssp -----------------------------------TTTEEEEEECCCTTCBHHHHGGGS-CCCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCceEEEEEecccCCcHHHHHhhC-CCCHHHHHHHHHHHHHHHHH
Confidence 2357899999997 5999998764 49999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++.+||+|||+++....... .........||+.|+|||++.+ ..++.
T Consensus 150 LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~~~ 216 (318)
T 3lxp_A 150 LHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE------------YYRVREDGDSPVFWYAPECLKE-YKFYY 216 (318)
T ss_dssp HHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCS------------EEEC---CCCCGGGCCHHHHHH-CEEEH
T ss_pred HHhCCccCCCCchheEEEcCCCCEEECCcccccccccccc------------ccccccCCCCCceeeChHHhcC-CCCCc
Confidence 9999999999999999999999999999999986532210 0111234568899999999987 56889
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHH-------------HHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQ-------------IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP 678 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~-------------~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP 678 (1196)
++|||||||++|+|++ ||....... ............++.....++++.+||++||+.||.+||
T Consensus 217 ~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp 296 (318)
T 3lxp_A 217 ASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRP 296 (318)
T ss_dssp HHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred HHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCc
Confidence 9999999999999997 554332211 111122223334444556778999999999999999999
Q ss_pred CHHHHHhc
Q 000993 679 SATELLQD 686 (1196)
Q Consensus 679 ta~eiL~~ 686 (1196)
|+.++++.
T Consensus 297 s~~ell~~ 304 (318)
T 3lxp_A 297 TFENLIPI 304 (318)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 99999863
|
| >1hc7_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP + L-proline + tRNA(Pro) AMP + PPI + L-prolyl-tRNA(Pro); 2.43A {Thermus thermophilus} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1h4q_A* 1h4t_A 1h4s_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-36 Score=360.00 Aligned_cols=325 Identities=11% Similarity=0.029 Sum_probs=256.2
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecC---CCcccccceEEEeecC----CceEeecCC
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG---DCPQFKRNTVKLLTHG----GDLLELSHE 808 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~---~~~~~~~~my~f~D~~----G~~laLRPD 808 (1196)
.++|++|++|.++.+++.|++.+++.|+++||++|.||+| ++.. +.+.+.++||+|.|.+ |+.++|||+
T Consensus 32 ~~~G~~d~lP~g~~l~~~I~~~~r~~~~~~G~~ei~tP~l~~~el~~~~sgh~d~f~~emy~~~d~g~~~l~~~l~LRP~ 111 (477)
T 1hc7_A 32 PVRGTIVVRPYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFLRKEAEHVEGFSPELAVVTHAGGEELEEPLAVRPT 111 (477)
T ss_dssp SSTTCEEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEESTTC---------CCTTCEEEEEESSSEEEEEEEECSC
T ss_pred CCCCeEEECccHHHHHHHHHHHHHHHHHHcCCEEEecCccccHHHHhhcCCcccccccceEEEECCCCccCCCeEEEcCC
Confidence 4799999999999999999999999999999999999999 3322 2456789999999987 899999999
Q ss_pred CcHHHHHHHHhC----CCCceeEEEecCeeecCC-CCC--CCcceeEeEEEEeCCCCccchHHHHHH---HHHHH-HHcC
Q 000993 809 LRLPFIRWAISN----QKSSFKRYEISSVYRRAI-GHS--PPNRYLQGDFDIIGGASALTEAEVLKV---TMDIV-TRFF 877 (1196)
Q Consensus 809 ~T~~iaR~~a~~----~~~P~r~~Y~G~VfR~e~-~~~--~~~ef~Q~GvEiiG~~~~~aDaEvI~l---a~~~L-~~lg 877 (1196)
.|++++|+++.+ +..|+|+||+|+|||+|. +++ |.|||+|+|+|+||.....+|+|++.+ +.+++ +.||
T Consensus 112 ~~~~i~~~~~~~~~s~r~LP~rl~qig~vfR~E~~~rGl~R~REF~q~d~~~~~~~~~~ad~E~~~~l~~~~~i~~~~Lg 191 (477)
T 1hc7_A 112 SETVIGYMWSKWIRSWRDLPQLLNQWGNVVRWEMRTRPFLRTSEFLWQEGHTAHATREEAEEEVRRMLSIYARLAREYAA 191 (477)
T ss_dssp SHHHHHHHHHHHCCBGGGCCEEEEEEEEEECCCSSCBTTTBCSEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcHHHHHHHHhhhhccccCCeeeEeecCEEeCCCCCCCcceeEEEEEccEEEEeCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999988874 346999999999999984 555 666799999999999999999998776 89999 8999
Q ss_pred CCCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Q 000993 878 HAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLR 957 (1196)
Q Consensus 878 i~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~ 957 (1196)
+. +.+.+++. .++. .
T Consensus 192 l~--~~~~~~~~--------------------------~e~~---------------------~---------------- 206 (477)
T 1hc7_A 192 IP--VIEGLKTE--------------------------KEKF---------------------A---------------- 206 (477)
T ss_dssp CC--CEEEECCT--------------------------TTSC---------------------T----------------
T ss_pred Ce--EEEEeCCh--------------------------HHhc---------------------C----------------
Confidence 95 89988861 0100 0
Q ss_pred hcCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccc
Q 000993 958 FCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVG 1037 (1196)
Q Consensus 958 ~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~G 1037 (1196)
|.. ....+|.-+.-|..||+|++|+. +. +.+.+.|
T Consensus 207 --g~~--------------------------------~~~~ie~~~~dgr~~~~gt~~~l---g~--------~~s~~~g 241 (477)
T 1hc7_A 207 --GAV--------------------------------YTTTIEALMKDGKALQAGTSHYL---GE--------NFARAFD 241 (477)
T ss_dssp --TSS--------------------------------EEEEEEEECTTSCEEEEEEEEEE---ET--------HHHHHTT
T ss_pred --Ccc--------------------------------cceEEEEEcCCCcEEEEeeeEEc---cc--------ccccccC
Confidence 000 00111111111345799999986 21 1368999
Q ss_pred cccchhhhhccccccccccCCCCCCCcceecccHHHHHhhccC------CCCCCCCCCCceEEEEEcCCC----chHHHH
Q 000993 1038 GRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV------DFKPVRNEAGTSVLVCSRGGG----GLLVER 1107 (1196)
Q Consensus 1038 GRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~------~~~~~~~~~~~~vlv~~~~~~----~~~~~a 1107 (1196)
+||++. -| ....++++||++| +|++.+|.+ +...+...+|.+|+|++.+.+ ....+|
T Consensus 242 ~~y~~~---~G---------~~~~~~~~~~Gig-eRli~~lie~~~d~~gl~~P~~laP~qV~Iipi~~~~~~~~~~~~a 308 (477)
T 1hc7_A 242 IKFQDR---DL---------QVKYVHTTSWGLS-WRFIGAIIMTHGDDRGLVLPPRLAPIQVVIVPIYKDESRERVLEAA 308 (477)
T ss_dssp CEEECT---TS---------CEEECEEEEEEEE-THHHHHHHHHHCBTTBCCCCTTTCSCSEEEEECCCTTTHHHHHHHH
T ss_pred eEEECC---CC---------CEEeeeEeeccHH-HHHHHHHHHHhCccccccCCcccCCceEEEEEcCCcchHHHHHHHH
Confidence 999864 12 2223678999999 999988842 222222336789999998622 468899
Q ss_pred HHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 000993 1108 MELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1187 (1196)
Q Consensus 1108 ~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~ 1187 (1196)
.+++++||+.|++|+++...+.++++++++|++.|+|++|+||++|+++|+|+||+++ ++|..++++++++.|++.++.
T Consensus 309 ~~l~~~Lr~~Gi~v~~D~~~~~s~g~k~~~a~~~G~p~~iiiG~~el~~~~V~vr~r~-~eq~~v~~~el~~~l~~~l~~ 387 (477)
T 1hc7_A 309 QGLRQALLAQGLRVHLDDRDQHTPGYKFHEWELKGVPFRVELGPKDLEGGQAVLASRL-GGKETLPLAALPEALPGKLDA 387 (477)
T ss_dssp HHHHHHHHHTTCCEEECCCSSSCHHHHHHHHHHTTCSEEEEECHHHHHTTEEEEEETT-SCCCEEEGGGHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEEeCCCCCCHHHHHHHHhhcCCCEEEEECcchhcCCEEEEEEec-CceEEEeHHHHHHHHHHHHHH
Confidence 9999999999999998765357999999999999999999999999999999999999 999999999999999877764
Q ss_pred h
Q 000993 1188 Q 1188 (1196)
Q Consensus 1188 ~ 1188 (1196)
.
T Consensus 388 ~ 388 (477)
T 1hc7_A 388 F 388 (477)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=339.82 Aligned_cols=241 Identities=24% Similarity=0.391 Sum_probs=191.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|.+. |+.||||+++... ..+.+.+|+.+++.++||||+++++++.+.
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 86 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEE------- 86 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC-------
T ss_pred hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchh----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcC-------
Confidence 578999999999999999999885 8999999986432 356789999999999999999999886431
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDH--FDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~--l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+||||+++ +|.+++..... +++..++.++.||+.||+|||
T Consensus 87 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH 134 (278)
T 1byg_A 87 --------------------------------KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 134 (278)
T ss_dssp ----------------------------------CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH
Confidence 2356999999975 99999976543 899999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+||+++.++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++
T Consensus 135 ~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~-~~~~~~~ 195 (278)
T 1byg_A 135 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST------------------QDTGKLPVKWTAPEALRE-KKFSTKS 195 (278)
T ss_dssp HTTCCCSCCSGGGEEECTTSCEEECCCCC------------------------------CCTTTSCHHHHHH-CCCCHHH
T ss_pred hCCccccCCCcceEEEeCCCcEEEeecccccccccc------------------ccCCCccccccCHHHhCC-CCCCchh
Confidence 999999999999999999999999999999754211 122367889999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||||||+++|||++ ||............ . ....+......++.+.++|++||+.||.+|||+.++++.
T Consensus 196 Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 267 (278)
T 1byg_A 196 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-E-KGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ 267 (278)
T ss_dssp HHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHH-T-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-h-cCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHH
Confidence 99999999999986 66654433332222 2 222233344567899999999999999999999999863
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=357.14 Aligned_cols=252 Identities=21% Similarity=0.267 Sum_probs=190.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCC---cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDG---RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g---~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
..|.+.+.||+|+||+||+|++..++ ..||||.++.. .......++.+|+.+++.++||||++++++|.+.
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~----- 162 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS----- 162 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC-SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCC-----
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-----
Confidence 45888999999999999999986443 46899988642 3344567899999999999999999999987432
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
....|+|||||+ ++|.+++... ..+++..++.++.||+.||+||
T Consensus 163 ----------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L 208 (373)
T 3c1x_A 163 ----------------------------------EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 208 (373)
T ss_dssp ----------------------------------SSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHH
Confidence 234689999997 5999999765 4589999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+|||++.++.+||+|||+++......... ........+|+.|+|||++.+ ..++.+
T Consensus 209 H~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~-----------~~~~~~~~~~~~y~aPE~~~~-~~~~~~ 276 (373)
T 3c1x_A 209 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS-----------VHNKTGAKLPVKWMALESLQT-QKFTTK 276 (373)
T ss_dssp HHTTCCCSCCCGGGEEECTTCCEEECCC--------------------------------CCGGGSCHHHHHH-CCCCHH
T ss_pred HHCCEecCccchheEEECCCCCEEEeecccccccccccccc-----------ccccCCCCCcccccChHHhcC-CCCCcH
Confidence 99999999999999999999999999999998653221100 112234568899999999987 578999
Q ss_pred chhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 616 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||||||++|||++ ||......+...... ....+......++.+.++|.+||+.||.+|||+.+++++
T Consensus 277 ~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~--~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~ 349 (373)
T 3c1x_A 277 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 349 (373)
T ss_dssp HHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999997 665443333322222 222233334567789999999999999999999999975
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=362.25 Aligned_cols=254 Identities=30% Similarity=0.455 Sum_probs=188.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+.|...+.||+|+||+||.+ ...+|+.||||++... ..+.+.+|+.+|+.+ +|||||++++++.
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~-----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~--------- 79 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYYCSET--------- 79 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGG-----GHHHHHHHHHHHHHHTTSTTBCCEEEEEE---------
T ss_pred heeeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHH-----HHHHHHHHHHHHHhccCCCCcCeEEEEEe---------
Confidence 45566788999999999875 4558999999998642 245678999999886 8999999998763
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCC-------CHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHF-------DKELAWHLFRQIVEGL 532 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l-------~e~~~~~i~~qIa~gL 532 (1196)
....+|+|||||+|+|.+++...... ++..++.++.||+.||
T Consensus 80 -------------------------------~~~~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL 128 (434)
T 2rio_A 80 -------------------------------TDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 128 (434)
T ss_dssp -------------------------------CSSEEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHH
T ss_pred -------------------------------cCCeEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHH
Confidence 24578999999999999999865433 2334578999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCC-------------CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcccccc
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDAR-------------NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 599 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~-------------~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 599 (1196)
+|||++||+||||||+|||++.+ +.+||+|||+|+........ ........+||+.
T Consensus 129 ~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~-----------~~~~~~~~~gt~~ 197 (434)
T 2rio_A 129 AHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSS-----------FRTNLNNPSGTSG 197 (434)
T ss_dssp HHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC-------------------------CCT
T ss_pred HHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCcc-----------ceeeecCCCCCCC
Confidence 99999999999999999999754 47999999999865422100 0111234589999
Q ss_pred CCCchhccC------CCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCC----ccccCCHHHHHH
Q 000993 600 YTAPEIEQG------WPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPP----SWVAKFSEQESL 665 (1196)
Q Consensus 600 Y~APE~l~~------~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~----~~~~~~~~l~~L 665 (1196)
|+|||++.+ ...++.++|||||||++|||++ ||......... .+......+. .....++++.+|
T Consensus 198 y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~--i~~~~~~~~~~~~~~~~~~~~~~~~l 275 (434)
T 2rio_A 198 WRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN--IIRGIFSLDEMKCLHDRSLIAEATDL 275 (434)
T ss_dssp TSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHH--HHHTCCCCCCCTTCCCHHHHHHHHHH
T ss_pred ccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHH--HhcCCCCcccccccccccchHHHHHH
Confidence 999999875 2458999999999999999996 77654333321 1221212211 112234688999
Q ss_pred HHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 666 LRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 666 I~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
|.+||+.||.+|||+.++++||||....
T Consensus 276 i~~~L~~dP~~Rps~~eil~hp~f~~~~ 303 (434)
T 2rio_A 276 ISQMIDHDPLKRPTAMKVLRHPLFWPKS 303 (434)
T ss_dssp HHHHTCSSGGGSCCHHHHHTSGGGSCHH
T ss_pred HHHHhhCChhhCCCHHHHHhCCccCCcH
Confidence 9999999999999999999999997654
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-36 Score=362.28 Aligned_cols=245 Identities=23% Similarity=0.334 Sum_probs=196.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|.+. .+..||||+++.... ..+.+.+|+.+|+.++||||+++++++.+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------- 250 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-------- 250 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEECCTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred hhHceeeeeecCCCCeEEEEEEEC-CCceEEEEEeccCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEcC--------
Confidence 368999999999999999999997 456799999875432 24679999999999999999999988621
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
..+|+|||||+ |+|.+++.. ...+++..++.++.||+.||+|||
T Consensus 251 ---------------------------------~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH 297 (452)
T 1fmk_A 251 ---------------------------------EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297 (452)
T ss_dssp ---------------------------------SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 23589999996 599999974 356999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++.+||+|||+++....... .......+|+.|+|||++.+ ..++.++
T Consensus 298 ~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~s 362 (452)
T 1fmk_A 298 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY--------------TARQGAKFPIKWTAPEAALY-GRFTIKS 362 (452)
T ss_dssp HTTCCCSCCSGGGEEECGGGCEEECCCCTTC----------------------------CCGGGSCHHHHHH-CCCCHHH
T ss_pred hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCce--------------ecccCCcccccccCHhHHhc-CCCCccc
Confidence 99999999999999999999999999999986532210 11223457889999999987 5789999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||||||+||||++ ||......+...... .+..++.....++.+.+||.+||+.||.+|||++++++.
T Consensus 363 DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~ 434 (452)
T 1fmk_A 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVE--RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF 434 (452)
T ss_dssp HHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH--TTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 99999999999997 777665555443332 222233334567889999999999999999999999863
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-36 Score=376.41 Aligned_cols=244 Identities=22% Similarity=0.286 Sum_probs=197.4
Q ss_pred eeeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~--~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
++||+|+||.||+|.+. .+++.||||+++.........+.+.+|+.+|+.++|||||+++++|.
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-------------- 440 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-------------- 440 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE--------------
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe--------------
Confidence 47999999999999654 56789999999765555555678999999999999999999998872
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...+++|||||+ |+|.+++.....+++..++.++.||+.||+|||++||+||
T Consensus 441 ---------------------------~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHr 493 (635)
T 4fl3_A 441 ---------------------------AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 493 (635)
T ss_dssp ---------------------------SSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred ---------------------------cCCEEEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCC
Confidence 123689999997 5999999988889999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+|+.+...... ........+|+.|+|||++.+ ..++.++|||||||
T Consensus 494 DLkp~NILl~~~~~~kL~DFGla~~~~~~~~~------------~~~~~~~~~t~~y~APE~~~~-~~~~~~sDvwSlGv 560 (635)
T 4fl3_A 494 DLAARNVLLVTQHYAKISDFGLSKALRADENY------------YKAQTHGKWPVKWYAPECINY-YKFSSKSDVWSFGV 560 (635)
T ss_dssp CCSGGGEEEEETTEEEECCTTHHHHTTC-------------------------CGGGSCHHHHHH-CCCCHHHHHHHHHH
T ss_pred CCChHhEEEeCCCCEEEEEcCCccccccCccc------------cccccCCCCceeeeChhhhcC-CCCCcHHHHHHHHH
Confidence 99999999999999999999999876432110 111234467899999999987 57999999999999
Q ss_pred HHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 624 VFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 624 iLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+||||++ ||......+...... ....++.....++++.+||.+||+.||.+|||+.++++.
T Consensus 561 ~l~ellt~G~~Pf~~~~~~~~~~~i~--~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~ 625 (635)
T 4fl3_A 561 LMWEAFSYGQKPYRGMKGSEVTAMLE--KGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR 625 (635)
T ss_dssp HHHHHHTTTCCSSTTCCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred HHHHHHhCCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 9999996 887666555443332 233333344567899999999999999999999999864
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-37 Score=353.09 Aligned_cols=252 Identities=26% Similarity=0.330 Sum_probs=196.3
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
...++|++.+.||+|+||.||+|+++ +|+.||||++... .....+.+.+|+.+++.++||||++++++|.+
T Consensus 36 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------ 106 (321)
T 2qkw_B 36 EATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPE--SSQGIEEFETEIETLSFCRHPHLVSLIGFCDE------ 106 (321)
T ss_dssp CCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSC--CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCC------
T ss_pred HHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEeccc--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC------
Confidence 34578999999999999999999975 7999999987643 23346779999999999999999999988732
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----CCCHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----HFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----~l~e~~~~~i~~qIa~gL 532 (1196)
...+|+|||||+ ++|.+++.... .+++..++.++.||+.||
T Consensus 107 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l 152 (321)
T 2qkw_B 107 ----------------------------------RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152 (321)
T ss_dssp ----------------------------------TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHH
Confidence 345699999997 59999886543 589999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||++||+||||||+|||++.++.+||+|||+++....... ........||+.|+|||++.+ ..+
T Consensus 153 ~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~-~~~ 218 (321)
T 2qkw_B 153 HYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQ-------------THLSTVVKGTLGYIDPEYFIK-GRL 218 (321)
T ss_dssp HHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSC-------------CCCBCCCEEETTTCCHHHHHH-CBC
T ss_pred HHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccccccc-------------cccccccCCCccccCHHHhcC-CCC
Confidence 999999999999999999999999999999999975421110 011234569999999999987 568
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHH-----HHHHHhhhcCCC--------C-CccccCCHHHHHHHHHcccCCCC
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQ-----IVLSDLKQKGEL--------P-PSWVAKFSEQESLLRRLMSPSPS 675 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~-----~~~~~l~~~~~~--------p-~~~~~~~~~l~~LI~~cL~~dP~ 675 (1196)
+.++|||||||++|||++ ||....+.. ...........+ . ......+..+.+++.+||+.||.
T Consensus 219 ~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~ 298 (321)
T 2qkw_B 219 TEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSE 298 (321)
T ss_dssp CTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGG
T ss_pred CcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcc
Confidence 999999999999999996 665322110 000000001111 0 11122334688999999999999
Q ss_pred CCCCHHHHHhc
Q 000993 676 DRPSATELLQD 686 (1196)
Q Consensus 676 ~RPta~eiL~~ 686 (1196)
+|||+.+++++
T Consensus 299 ~Rps~~ell~~ 309 (321)
T 2qkw_B 299 DRPSMGDVLWK 309 (321)
T ss_dssp GSCCHHHHHHH
T ss_pred cCcCHHHHHHH
Confidence 99999999976
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-36 Score=343.66 Aligned_cols=253 Identities=27% Similarity=0.402 Sum_probs=199.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEE----ccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKN----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~----~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.++|++++.||+|+||.||+|++ ..+|+.||||++... .....+.+.+|+.+++.++||||+++++++...
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--- 114 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA--- 114 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEec---
Confidence 46899999999999999999994 568999999998643 344567899999999999999999999887431
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~ 533 (1196)
....+++||||++ ++|.+++... ..+++..++.++.||+.||+
T Consensus 115 -----------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~ 159 (326)
T 2w1i_A 115 -----------------------------------GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 159 (326)
T ss_dssp --------------------------------------CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHH
Confidence 1235789999997 5999999875 46999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+|||++.++.+||+|||+++....... .........+|+.|+|||++.+ ..++
T Consensus 160 ~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~~ 226 (326)
T 2w1i_A 160 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE------------YYKVKEPGESPIFWYAPESLTE-SKFS 226 (326)
T ss_dssp HHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCS------------EEECSSCCSCCGGGCCHHHHHH-CEEE
T ss_pred HHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhcccccc------------ccccccCCCCceeEECchhhcC-CCCC
Confidence 99999999999999999999999999999999986532210 0011233467889999999987 5689
Q ss_pred CcchhHHHHHHHHHhhc---CCchhHHH---------------HHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCC
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAMER---------------QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 675 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~~~---------------~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~ 675 (1196)
.++|||||||++|||++ ||...... ......+. ....++.....++++.+||++||+.||.
T Consensus 227 ~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~ 305 (326)
T 2w1i_A 227 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK-NNGRLPRPDGCPDEIYMIMTECWNNNVN 305 (326)
T ss_dssp HHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHH-TTCCCCCCTTCCHHHHHHHHHHSCSSGG
T ss_pred chhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhh-cCCCCCCCCcccHHHHHHHHHHcCCChh
Confidence 99999999999999997 44322110 01111222 2223333455678999999999999999
Q ss_pred CCCCHHHHHhc
Q 000993 676 DRPSATELLQD 686 (1196)
Q Consensus 676 ~RPta~eiL~~ 686 (1196)
+|||+.++++.
T Consensus 306 ~Rps~~el~~~ 316 (326)
T 2w1i_A 306 QRPSFRDLALR 316 (326)
T ss_dssp GSCCHHHHHHH
T ss_pred hCcCHHHHHHH
Confidence 99999999864
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=359.42 Aligned_cols=252 Identities=23% Similarity=0.369 Sum_probs=197.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
-++|.+.+.||+|+||+||+|+++.+|+.||||+++.... ....+.+.+|+.+|+.++||||+++++++.+.
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~------- 79 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEET------- 79 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT-------
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCCCeEEEeeccC-------
Confidence 4689999999999999999999999999999999974322 22356788999999999999999999887432
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---HFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---~l~e~~~~~i~~qIa~gL~yL 535 (1196)
....+|+|||||+ ++|.+++.... .+++..++.++.||+.||+||
T Consensus 80 -------------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~L 128 (396)
T 4eut_A 80 -------------------------------TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL 128 (396)
T ss_dssp -------------------------------TTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------CCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHH
Confidence 1346799999996 59999997643 399999999999999999999
Q ss_pred HhCCCcccCCCcCcEEe----cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC--
Q 000993 536 HGQGIIHRDLTPNNIFF----DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-- 609 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILl----d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-- 609 (1196)
|++||+||||||+|||+ +.++.+||+|||+++...... ......||+.|+|||++.+.
T Consensus 129 H~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~ 192 (396)
T 4eut_A 129 RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE----------------QFVSLYGTEEYLHPDMYERAVL 192 (396)
T ss_dssp HHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGG----------------GSSCSSSCCTTCCHHHHHHHCC
T ss_pred HHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCC----------------ccccccCCccccCHHHhhcccc
Confidence 99999999999999999 777789999999998653221 12345799999999998641
Q ss_pred -----CCCCCcchhHHHHHHHHHhhc---CCchh----HHHHHHHHHhhhcCC-------------------CCCc---c
Q 000993 610 -----PKIDEKADMYSLGIVFFELWH---PFSTA----MERQIVLSDLKQKGE-------------------LPPS---W 655 (1196)
Q Consensus 610 -----~~~s~ksDVwSlGviLyELlt---Pf~~~----~~~~~~~~~l~~~~~-------------------~p~~---~ 655 (1196)
..++.++|||||||++|||++ ||... ...+.....+..... .+.. .
T Consensus 193 ~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 272 (396)
T 4eut_A 193 RKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLS 272 (396)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSC
T ss_pred ccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccc
Confidence 246789999999999999996 77532 223333333332211 0100 0
Q ss_pred ccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 656 VAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 656 ~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
....+.+.++|++||+.||.+|||+.+++++
T Consensus 273 ~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~ 303 (396)
T 4eut_A 273 RGLQVLLTPVLANILEADQEKCWGFDQFFAE 303 (396)
T ss_dssp HHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred hHHHhhchHHHHHhhccChhhhccHHHHHHH
Confidence 1122467899999999999999999999864
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=339.54 Aligned_cols=252 Identities=25% Similarity=0.359 Sum_probs=193.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc-CCc--EEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKL-DGR--HYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~-~g~--~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.++|++.+.||+|+||.||+|++.. +++ .||||+++.... .....+.+.+|+.+++.++||||+++++++..
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 92 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT---- 92 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc----
Confidence 4789999999999999999999753 333 689999875432 23456789999999999999999999988732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~ 533 (1196)
...++||||++ ++|.+++... ..+++..++.++.||+.||+
T Consensus 93 -------------------------------------~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~ 135 (291)
T 1u46_A 93 -------------------------------------PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 135 (291)
T ss_dssp -------------------------------------SSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHH
Confidence 12589999997 5999988764 56999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
|||++||+||||||+|||++.++.+||+|||+++....... .........+|+.|+|||++.+ ..++
T Consensus 136 ~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~~ 202 (291)
T 1u46_A 136 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD------------HYVMQEHRKVPFAWCAPESLKT-RTFS 202 (291)
T ss_dssp HHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CC------------EEEC-----CCGGGCCHHHHHH-CEEE
T ss_pred HHHhCCcccCCCchheEEEcCCCCEEEcccccccccccccc------------chhhhccCCCCceeeCchhhcC-CCCC
Confidence 99999999999999999999999999999999986532210 0111234568889999999987 5688
Q ss_pred CcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 614 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++||||||+++|+|++ ||......+....... ....++.....++++.++|.+||+.||.+|||+.+++++
T Consensus 203 ~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 278 (291)
T 1u46_A 203 HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK-EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDF 278 (291)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT-SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred chhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHc-cCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 99999999999999996 7766655554444333 333344445677899999999999999999999999874
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-37 Score=353.80 Aligned_cols=251 Identities=25% Similarity=0.328 Sum_probs=193.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|++. +|+.||||++...... .....+.+|+.+++.++||||++++++|..
T Consensus 29 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------- 98 (326)
T 3uim_A 29 SDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMT-------- 98 (326)
T ss_dssp TTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEECC--------
T ss_pred hhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCc-hHHHHHHHHHHHHHhccCCCccceEEEEec--------
Confidence 468899999999999999999865 7999999998754321 122368899999999999999999998732
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC----CCCHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----HFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----~l~e~~~~~i~~qIa~gL~y 534 (1196)
....++|||||+ ++|.+++.... .+++..++.++.||+.||+|
T Consensus 99 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~ 146 (326)
T 3uim_A 99 --------------------------------PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAY 146 (326)
T ss_dssp --------------------------------SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHH
Confidence 334589999996 49999997543 49999999999999999999
Q ss_pred HHhC---CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 535 IHGQ---GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 535 LHs~---gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
||++ ||+||||||+|||++.++.+||+|||+++...... ........||+.|+|||++.+ ..
T Consensus 147 lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~-~~ 211 (326)
T 3uim_A 147 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD--------------THVTTAVRGTIGHIAPEYLST-GK 211 (326)
T ss_dssp HHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSS--------------SCEECCCCSCGGGCCHHHHHH-SE
T ss_pred HHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCccc--------------ccccccccCCcCccCHHHhcc-CC
Confidence 9999 99999999999999999999999999998653211 011233569999999999987 56
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHH-------HHHHHHhhhcCCC---------CCccccCCHHHHHHHHHcccC
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMER-------QIVLSDLKQKGEL---------PPSWVAKFSEQESLLRRLMSP 672 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~-------~~~~~~l~~~~~~---------p~~~~~~~~~l~~LI~~cL~~ 672 (1196)
++.++|||||||++|||++ ||...... ............. +......++.+.+++.+||+.
T Consensus 212 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 291 (326)
T 3uim_A 212 SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQS 291 (326)
T ss_dssp ECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCS
T ss_pred CCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCc
Confidence 8999999999999999997 77532210 0001110001100 011112235788999999999
Q ss_pred CCCCCCCHHHHHhcc
Q 000993 673 SPSDRPSATELLQDA 687 (1196)
Q Consensus 673 dP~~RPta~eiL~~~ 687 (1196)
||.+|||+.+++++.
T Consensus 292 dP~~Rps~~ell~~L 306 (326)
T 3uim_A 292 SPMERPKMSEVVRML 306 (326)
T ss_dssp CGGGSCCHHHHHHHH
T ss_pred CCccCCCHHHHHHHh
Confidence 999999999999874
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-36 Score=344.17 Aligned_cols=259 Identities=22% Similarity=0.350 Sum_probs=187.8
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHH--HHhcCCCCeeeeeeeeeecCcc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVAT--LSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~i--L~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
..+++|++.+.||+|+||.||+|++ +++.||||++.... ...+..|..+ ++.++||||+++++.+....
T Consensus 10 ~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-- 80 (336)
T 3g2f_A 10 LDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN-----RQNFINEKNIYRVPLMEHDNIARFIVGDERVT-- 80 (336)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC--
T ss_pred cChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc-----hhhHHHHHHHHHHHhccCcchhhheecccccc--
Confidence 3468999999999999999999977 58999999987432 2334444444 45589999999997663211
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
......+|+|||||+ |+|.+++... ..++..++.++.||+.||+|
T Consensus 81 ---------------------------------~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~~L~~ 126 (336)
T 3g2f_A 81 ---------------------------------ADGRMEYLLVMEYYPNGSLXKYLSLH-TSDWVSSCRLAHSVTRGLAY 126 (336)
T ss_dssp ---------------------------------TTSCEEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------cCCCceEEEEEecCCCCcHHHHHhhc-ccchhHHHHHHHHHHHHHHH
Confidence 012456899999996 5999999654 45889999999999999999
Q ss_pred HHhC---------CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchh
Q 000993 535 IHGQ---------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 605 (1196)
Q Consensus 535 LHs~---------gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 605 (1196)
||++ ||+||||||+|||++.++.+||+|||+++.+........ ..........+||+.|+|||+
T Consensus 127 LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~-------~~~~~~~~~~~gt~~y~aPE~ 199 (336)
T 3g2f_A 127 LHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRP-------GEEDNAAISEVGTIRYMAPEV 199 (336)
T ss_dssp HHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC----------------CCTTSCGGGCCHHH
T ss_pred HHhhhccccccccceeecccccceEEEcCCCcEEEeeccceeecccccccCc-------cccccccccCCCccceeCchh
Confidence 9999 999999999999999999999999999986543221100 001112345679999999999
Q ss_pred ccCC------CCCCCcchhHHHHHHHHHhhc---CCchhHH-----------------HHHHHHHhhh---cCCCCCccc
Q 000993 606 EQGW------PKIDEKADMYSLGIVFFELWH---PFSTAME-----------------RQIVLSDLKQ---KGELPPSWV 656 (1196)
Q Consensus 606 l~~~------~~~s~ksDVwSlGviLyELlt---Pf~~~~~-----------------~~~~~~~l~~---~~~~p~~~~ 656 (1196)
+.+. ..++.++|||||||++|||++ ||..... .......... ...+|..+.
T Consensus 200 ~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (336)
T 3g2f_A 200 LEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWK 279 (336)
T ss_dssp HTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCC
T ss_pred hcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccc
Confidence 9862 235678999999999999985 4322110 0111111111 122233222
Q ss_pred c---CCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 657 A---KFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 657 ~---~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
. .++.+.+||.+||+.||.+|||+.++++.
T Consensus 280 ~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~ 312 (336)
T 3g2f_A 280 ENSLAVRSLKETIEDCWDQDAEARLTAQXAEER 312 (336)
T ss_dssp CCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred cccchHHHHHHHHHHHhcCChhhCcchHHHHHH
Confidence 2 23478999999999999999999999863
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=345.64 Aligned_cols=253 Identities=25% Similarity=0.348 Sum_probs=195.7
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++.+.||+|+||.||+|++.. .+|+|+++...........+.+|+.+++.++||||+++++++.+
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------- 100 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS------- 100 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC-------
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec-------
Confidence 35789999999999999999999863 49999987654443344567889999999999999999998743
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|++||||+ ++|.+++.... .+++..++.++.||+.||+|||
T Consensus 101 ---------------------------------~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH 147 (319)
T 2y4i_B 101 ---------------------------------PPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH 147 (319)
T ss_dssp ---------------------------------SSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345799999997 59999997655 6999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC--------
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG-------- 608 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-------- 608 (1196)
++||+||||||+|||++ ++.+||+|||+++......... .........||+.|+|||++.+
T Consensus 148 ~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~----------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~ 216 (319)
T 2y4i_B 148 AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGR----------REDKLRIQNGWLCHLAPEIIRQLSPDTEED 216 (319)
T ss_dssp HTTCCCCCCCSTTEEEC---CCEECCCSCCC--------------------CCSCBCCSGGGGTSCHHHHSCBSCC--CC
T ss_pred hCCccccCCChhhEEEe-CCCEEEeecCCccccccccccc----------cccccccCCCcccccChHHhhhcccccccc
Confidence 99999999999999998 6899999999987643211100 0111234569999999999875
Q ss_pred CCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 609 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 609 ~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
...++.++|||||||++|||++ ||.............. ....+......++++.++|.+||+.||.+|||+.++++
T Consensus 217 ~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 295 (319)
T 2y4i_B 217 KLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGT-GMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMD 295 (319)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHT-TCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcc-CCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 2347889999999999999996 8876655544433322 22222222345668999999999999999999999987
Q ss_pred c
Q 000993 686 D 686 (1196)
Q Consensus 686 ~ 686 (1196)
.
T Consensus 296 ~ 296 (319)
T 2y4i_B 296 M 296 (319)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=370.27 Aligned_cols=249 Identities=20% Similarity=0.263 Sum_probs=196.4
Q ss_pred CCceEEe-eeccCCcEEEEEEEEcc--CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQ-PLGHGGFGHVVLCKNKL--DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~-~LG~G~fG~Vy~a~~~~--~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
+++.+.+ .||+|+||.||+|.++. ++..||||+++... .....+.+.+|+.+|+.++|||||+++++|..
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~------ 407 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------ 407 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC-SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES------
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc------
Confidence 4556666 89999999999998863 46679999987542 33456789999999999999999999998721
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
..+|+|||||+ |+|.+++... ..+++..++.++.||+.||+||
T Consensus 408 -----------------------------------~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~L 452 (613)
T 2ozo_A 408 -----------------------------------EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL 452 (613)
T ss_dssp -----------------------------------SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 23799999997 5999998754 4699999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+|||++.++.+||+|||+++.+...... ........+|+.|+|||++.+ ..++.+
T Consensus 453 H~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~------------~~~~~~~~~~~~y~APE~~~~-~~~~~~ 519 (613)
T 2ozo_A 453 EEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY------------YTARSAGKWPLKWYAPECINF-RKFSSR 519 (613)
T ss_dssp HHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------------------CCTTSCHHHHHH-CCCCHH
T ss_pred HHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce------------eeeccCCCCccceeCHhhhcC-CCCCcH
Confidence 9999999999999999999999999999999865322100 011123456789999999987 579999
Q ss_pred chhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 616 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||||||+||||++ ||......+...... .+..++.....++++.+||.+||+.||.+||++.++++.
T Consensus 520 sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~--~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~ 592 (613)
T 2ozo_A 520 SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE--QGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQR 592 (613)
T ss_dssp HHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH--cCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 999999999999996 787665555443332 233333344567899999999999999999999999863
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=364.84 Aligned_cols=245 Identities=23% Similarity=0.336 Sum_probs=200.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|.+. .+..||||+++.... ..+.+.+|+.+|+.++|||||++++++.+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------- 333 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-------- 333 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred hhhhhhheecccCCCeEEEEEEEC-CCceEEEEEeCCCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEee--------
Confidence 368999999999999999999997 456799999975432 24679999999999999999999988621
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
..+|||||||. |+|.+++... ..+++.+++.++.||+.||+|||
T Consensus 334 ---------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH 380 (535)
T 2h8h_A 334 ---------------------------------EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 380 (535)
T ss_dssp ---------------------------------SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 23689999997 5999999743 56999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++.+||+|||+++....... .......+|..|+|||++.+ ..++.++
T Consensus 381 ~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~s 445 (535)
T 2h8h_A 381 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY--------------TARQGAKFPIKWTAPEAALY-GRFTIKS 445 (535)
T ss_dssp HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH--------------HTTCSTTSCGGGSCHHHHHH-CCCCHHH
T ss_pred hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCce--------------ecccCCcCcccccCHHHhcc-CCCCchh
Confidence 99999999999999999999999999999986542211 11233467889999999987 5799999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||||||+||||++ ||......+...... .+...+....+++.+.+||.+||+.||.+|||+.+|++.
T Consensus 446 DvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~ 517 (535)
T 2h8h_A 446 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVE--RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF 517 (535)
T ss_dssp HHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 99999999999997 777665555443332 222223334567789999999999999999999999863
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=340.59 Aligned_cols=254 Identities=24% Similarity=0.376 Sum_probs=189.5
Q ss_pred CcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc--CCCCeeeeeeeeeecCc
Q 000993 377 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL--QHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 377 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L--~HpnIV~l~~~~~e~~~ 454 (1196)
....++|++.+.||+|+||.||+|++. |+.||||++... ....+.+|.+++..+ +||||+++++++....
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~- 104 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTT-----EEASWFRETEIYQTVLMRHENILGFIAADIKGT- 104 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC-
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecc-----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC-
Confidence 445579999999999999999999886 999999998632 234455566666554 9999999999885421
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~ 533 (1196)
.....+|+|||||++ +|.+++.. ..+++..++.++.||+.||+
T Consensus 105 -----------------------------------~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~ 148 (337)
T 3mdy_A 105 -----------------------------------GSWTQLYLITDYHENGSLYDYLKS-TTLDAKSMLKLAYSSVSGLC 148 (337)
T ss_dssp -----------------------------------GGGCEEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCCCceEEEEeccCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHH
Confidence 123578999999975 99999965 46999999999999999999
Q ss_pred HHHhC--------CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchh
Q 000993 534 HIHGQ--------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 605 (1196)
Q Consensus 534 yLHs~--------gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 605 (1196)
|||++ ||+||||||+|||++.++.+||+|||+++........ ........+||+.|+|||+
T Consensus 149 ~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-----------~~~~~~~~~gt~~y~aPE~ 217 (337)
T 3mdy_A 149 HLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNE-----------VDIPPNTRVGTKRYMPPEV 217 (337)
T ss_dssp HHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC--------------------CCSSCSCGGGCCHHH
T ss_pred HHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeecccccc-----------ccCCCCCCccCcceeChhh
Confidence 99999 9999999999999999999999999999765322111 1112235689999999999
Q ss_pred ccCCCCCCCc------chhHHHHHHHHHhhc-------------CCchhH----HHHHHHHHhhhcCC---CCCcc--cc
Q 000993 606 EQGWPKIDEK------ADMYSLGIVFFELWH-------------PFSTAM----ERQIVLSDLKQKGE---LPPSW--VA 657 (1196)
Q Consensus 606 l~~~~~~s~k------sDVwSlGviLyELlt-------------Pf~~~~----~~~~~~~~l~~~~~---~p~~~--~~ 657 (1196)
+.+. .+... +|||||||++|||++ ||.... .............. .|..+ ..
T Consensus 218 ~~~~-~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (337)
T 3mdy_A 218 LDES-LNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDE 296 (337)
T ss_dssp HTTC-CCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSH
T ss_pred cccc-cCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhH
Confidence 9873 34444 999999999999985 232211 11111122211111 22211 13
Q ss_pred CCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 658 KFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 658 ~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.++++.+||.+||+.||.+|||+.+++++
T Consensus 297 ~~~~l~~li~~~l~~dP~~Rps~~ell~~ 325 (337)
T 3mdy_A 297 CLRQMGKLMTECWAHNPASRLTALRVKKT 325 (337)
T ss_dssp HHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence 34578999999999999999999999986
|
| >3a32_A Probable threonyl-tRNA synthetase 1; aeropyrum pernix K1, protein biosynthesis, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; 2.30A {Aeropyrum pernix} PDB: 3a31_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=365.59 Aligned_cols=363 Identities=13% Similarity=0.108 Sum_probs=258.1
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec--CCCcccccceEEEeecCCceEeecCCCcHHH
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELRLPF 813 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRPD~T~~i 813 (1196)
.++|++||+|.++.+++.|++.+++.|.++||++|.||+| ++. ++.+.+.++||+| |++|+.++||||+|+++
T Consensus 37 ~~~G~~d~lP~g~~~~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~sg~~~~~~~emy~~-d~~~~~l~LRP~~t~~i 115 (471)
T 3a32_A 37 TGAGVPLFSLGGGPIRYALAEVLAKFHARRGYYVVETPIIASTELFKVSGHIEFYRNNMYLF-DIEGHEFAVKPMNCPYH 115 (471)
T ss_dssp HCTTCCCBCTTHHHHHHHHHHHHHHHHHHTTCEECCCCSEEETHHHHHTCCCTTGGGGSEEE-EETTEEEEECSCSHHHH
T ss_pred cCCEEEEECchHHHHHHHHHHHHHHHHHHcCCEEEECCeeeehHHhhhccCccccccceEEE-ecCCcEEEEccccHHHH
Confidence 5799999999999999999999999999999999999999 332 2345678999999 99999999999999999
Q ss_pred HHHHHhC----C---CCceeEEEecCeeecCCCC--C---CCcceeEeEEEEeCCCCccch--HHHHHHHHHHHHH-cCC
Q 000993 814 IRWAISN----Q---KSSFKRYEISSVYRRAIGH--S---PPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTR-FFH 878 (1196)
Q Consensus 814 aR~~a~~----~---~~P~r~~Y~G~VfR~e~~~--~---~~~ef~Q~GvEiiG~~~~~aD--aEvI~la~~~L~~-lgi 878 (1196)
+|+++++ + ..|+|+||+|+|||+|.++ . |.+||+|+|+|+||..+..+| +|+|.++.++|+. ||+
T Consensus 116 ~~~~~~~~~s~r~~~~lP~rl~~~g~vfR~E~~~~~~Gl~R~REF~Q~~~e~f~~~~~~~de~~e~i~~~~~~l~~~lGl 195 (471)
T 3a32_A 116 ILLFLNEVAKHRSKLPLPFKVFEFGRVHRYEPSGSIYGLLRVRGFTQDDAHIIVPGGRVIDVVYDVFEEMKLVLERLFKL 195 (471)
T ss_dssp HHHHHHHHHHHGGGSCSSEEEEEEEEEECCCCGGGCBTTTBCSEEEEEEEEEEEEGGGHHHHHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHhhhhhccccccCCeEEeeccceeccCCCcccccceeEEEEEECCeEEEcChHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 9998874 3 6799999999999998866 4 456799999999999999999 9999999999999 999
Q ss_pred ----CCceEEEeCcHH--HH-HHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHH
Q 000993 879 ----AESCDIHLNHGD--LL-EAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRL 951 (1196)
Q Consensus 879 ----~~~~~i~Lg~~~--i~-~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l 951 (1196)
.+ +.|.+||+. ++ +. .+|..+.+.+.. ..+. +.+ +..+...++.....+.+
T Consensus 196 ~~~~~~-~~l~i~~~~~~~~~e~---~~g~~~~~d~~~-~~l~----------------~~~-~~~l~~~~~~~~~~~~~ 253 (471)
T 3a32_A 196 GVSSET-FKVRLSMSDKSLIGKE---FMGSKEEWEGAE-EALR----------------EAA-SRINEKYGIDIVELEGE 253 (471)
T ss_dssp CCSTTT-EEEEEECCCGGGBTTT---BCSCHHHHHHHH-HHHH----------------HHH-HHHHHHHCCEEEEETTC
T ss_pred CcCCCC-eEEEEecCCCCccccc---ccCCHHHHHHHH-HHHH----------------HHH-HHHHHhcCCceEecccc
Confidence 65 999999973 11 11 123221111000 0000 001 11111122221111111
Q ss_pred HHHHHHhcCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCC--Ccc----ceEEEEEecCCCCc
Q 000993 952 QTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIES--YHR----NLFFQVFSVKEKYP 1025 (1196)
Q Consensus 952 ~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~--YYT----G~vFe~~~~~~~~~ 1025 (1196)
.+++ |+. +...+..+. .++.++ ...| .+.+|++++|+++ ||| |++ +.+.-+ .
T Consensus 254 ~~~~----gp~------i~~~l~d~~---~~l~~~--~~~g---~~~lD~~l~r~~d~~Yyt~~~~G~~-e~~~i~--~- 311 (471)
T 3a32_A 254 AAFY----GPK------LDFIMMVEE---SGVSKE--WQMG---TIQFDFNLPRRFRLYDVVREEFGIE-EVYIIH--R- 311 (471)
T ss_dssp SBTT----BCE------EEEEEEEES---SSCEEE--EEEE---EEEEESSHHHHTTHHHHHHHHHCCS-CEEEEE--E-
T ss_pred hhhC----CCc------cceEEeccH---Hhhhhh--heee---eEEecccccccCCceEeccccCCce-eeEEEe--c-
Confidence 0111 110 000000000 000000 0022 5899999999999 999 998 664321 0
Q ss_pred cccccccccccccccchhhhhccccccccccCCCCCCCcceecccHHHHHh-hccC-CCCCCCCCCCceEEEEEcCC---
Q 000993 1026 ATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQ-HYPV-DFKPVRNEAGTSVLVCSRGG--- 1100 (1196)
Q Consensus 1026 ~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~-~L~~-~~~~~~~~~~~~vlv~~~~~--- 1100 (1196)
+ ..| |+|||+. +++. +...+...++.+|+|++.+.
T Consensus 312 -------~------------------------------i~G---gieRli~~lie~~~g~~p~~~ap~qv~Iip~~~~~~ 351 (471)
T 3a32_A 312 -------A------------------------------LLG---SIERFLGVYLEHRRGRMPFTLAPIQFAVIAVKTGGE 351 (471)
T ss_dssp -------E------------------------------EEE---EHHHHHHHHHHHTTTCCCGGGCSCSEEEEEEECSST
T ss_pred -------c------------------------------ccC---cHHHHHHHHHHHhCCCCCCCcCCceEEEEEccCccc
Confidence 0 112 7899985 4443 21111123578899988742
Q ss_pred --CchHHHHHHHHHHHHHcCCeEEEee-CCCCCHHHHHHHHH-HCCCcEEEEEcCCcccCCeEEEEEcCCCc--ccccch
Q 000993 1101 --GGLLVERMELVAELWEENIKAQFVP-VPDPSLTEQYEYAS-EHDIKCLVILTDTGAQKGLVKVRHLDVKK--EKEVQR 1174 (1196)
Q Consensus 1101 --~~~~~~a~~~a~~Lr~~Gi~vel~~-~~~~~l~k~~~~A~-~~g~~~~iiig~~E~~~g~v~vk~l~~g~--q~~v~~ 1174 (1196)
+....+|.+++++||++|++|+++. . +.++++++++|+ +.|+|++|+||++|+++|+|+||++++++ +..+++
T Consensus 352 ~~~~~~~~a~~i~~~Lr~~Gi~v~~D~~~-~~~~g~k~~~a~~~~gip~~iiiG~~e~~~~~V~vr~r~~~~q~~~~v~~ 430 (471)
T 3a32_A 352 VDREIEDLASSIAKGLLDKGFRVAVKGSS-KTGLSSDVRHIESTAKPAVNVFIGAKEVREKVLDVRVFDLESMKRRRLAI 430 (471)
T ss_dssp THHHHHHHHHHHHHHHHHTTCEEEEEEEE-TTTHHHHHHHHHHTTCCSEEEEECHHHHHHTEEEEEEEETTTTEEEEEEE
T ss_pred ccHHHHHHHHHHHHHHHHCCCEEEEecCC-CCCHHHHHHHHHHhcCCCEEEEECchhhhCCEEEEEECCCCccceEEEee
Confidence 3467889999999999999999888 5 569999999999 99999999999999999999999999998 578888
Q ss_pred H-----HHHHHHHHHHHhh
Q 000993 1175 E-----SLVRFLLDAIASQ 1188 (1196)
Q Consensus 1175 ~-----el~~~l~~~l~~~ 1188 (1196)
+ ++++.|.+.+...
T Consensus 431 ~~~~~~~~~~~~~~~~~~~ 449 (471)
T 3a32_A 431 AYGDAADAVENLAAVAEEL 449 (471)
T ss_dssp ECSSHHHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHH
Confidence 8 7877776665543
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-35 Score=353.14 Aligned_cols=255 Identities=22% Similarity=0.273 Sum_probs=198.2
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++.++||+|+||.||+|++..+++.||||++...... .++.+|+.+++.++|++++..+..|..
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~E~~il~~L~~~~~i~~i~~~~~------- 73 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLLYESKIYRILQGGTGIPNVRWFGV------- 73 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS----CCHHHHHHHHHHTTTSTTCCCEEEEEE-------
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc----HHHHHHHHHHHHhcCCCCCCeEEEEEe-------
Confidence 457899999999999999999999999999999998755432 247889999999988665555444321
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
.....|||||||+++|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 74 --------------------------------~~~~~~lvme~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~ 121 (483)
T 3sv0_A 74 --------------------------------EGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS 121 (483)
T ss_dssp --------------------------------ETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------eCCEEEEEEECCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2456799999998899999975 5679999999999999999999999
Q ss_pred CCCcccCCCcCcEEe---cCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 538 QGIIHRDLTPNNIFF---DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 538 ~gIiHrDLKp~NILl---d~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
+||+||||||+|||| +.++.+||+|||+++.+.......... .......+||+.|+|||++.+ ..++.
T Consensus 122 ~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~--------~~~~~~~~gt~~Y~aPE~~~~-~~~s~ 192 (483)
T 3sv0_A 122 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIP--------YRENKNLTGTARYASVNTHLG-IEQSR 192 (483)
T ss_dssp TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCC--------CCCCCCCCSCTTTCCHHHHTT-CCCCH
T ss_pred CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccc--------cccccccCCCccccCHHHhcC-CCCCh
Confidence 999999999999999 688999999999998764322111000 112345689999999999998 56899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHH---HHHHHHHhhh--cCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 615 KADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQ--KGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~---~~~~~~~l~~--~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
++|||||||+||||++ ||..... .+........ ...........++++.+||.+||+.||.+||++.+|++
T Consensus 193 ~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~ 271 (483)
T 3sv0_A 193 RDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR 271 (483)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 9999999999999996 7764321 1111111111 11111122345678999999999999999999999875
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=336.27 Aligned_cols=245 Identities=23% Similarity=0.350 Sum_probs=190.0
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC--CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCc
Q 000993 385 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD--KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 462 (1196)
Q Consensus 385 ~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~--~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~ 462 (1196)
..+.||+|+||.||+|.+ +++.||||++.... ......+.+.+|+.+++.++||||+++++++.+
T Consensus 35 ~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----------- 101 (307)
T 2nru_A 35 GGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSD----------- 101 (307)
T ss_dssp TCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----------
T ss_pred cCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEec-----------
Confidence 347899999999999986 58999999986532 223456789999999999999999999998732
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 463 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES---YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 463 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~---~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|++|||++ ++|.+++.. ...+++..++.++.||+.||+|||++
T Consensus 102 -----------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~ 152 (307)
T 2nru_A 102 -----------------------------GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN 152 (307)
T ss_dssp -----------------------------SSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -----------------------------CCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 235689999996 699998864 34699999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+++....... ........||+.|+|||++.+ .++.++||
T Consensus 153 ~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~g~~~y~aPE~~~~--~~~~~~Dv 217 (307)
T 2nru_A 153 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ-------------TVMTSRIVGTTAYMAPEALRG--EITPKSDI 217 (307)
T ss_dssp TEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSS-------------CEECSSCCSCGGGCCHHHHTT--EECTHHHH
T ss_pred CeecCCCCHHHEEEcCCCcEEEeecccccccccccc-------------cccccccCCCcCcCChHHhcC--CCCccchh
Confidence 999999999999999999999999999976432110 011234579999999999876 48999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHH---HHHHhhh---------cCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMERQI---VLSDLKQ---------KGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 683 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~---~~~~l~~---------~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~ei 683 (1196)
|||||++|+|++ ||........ ....... ....+......+..+.+++.+||+.||.+|||+.++
T Consensus 218 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l 297 (307)
T 2nru_A 218 YSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297 (307)
T ss_dssp HHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHH
Confidence 999999999997 6654322110 0111110 011122222334578899999999999999999999
Q ss_pred Hhc
Q 000993 684 LQD 686 (1196)
Q Consensus 684 L~~ 686 (1196)
+++
T Consensus 298 ~~~ 300 (307)
T 2nru_A 298 QQL 300 (307)
T ss_dssp HHH
T ss_pred HHH
Confidence 975
|
| >1nyr_A Threonyl-tRNA synthetase 1; ATP, threonine, ligase; HET: ATP; 2.80A {Staphylococcus aureus} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 PDB: 1nyq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=377.57 Aligned_cols=355 Identities=11% Similarity=0.063 Sum_probs=255.2
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec--CCCcccccceEEEeecCC-ceEeecCCCcHH
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGG-DLLELSHELRLP 812 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G-~~laLRPD~T~~ 812 (1196)
.+.|++||+|.++.+++.|++.+++.|.++||++|.||+| ++. ++++.+.++||+|.|.+| +.++|||+.|++
T Consensus 259 ~~~G~~~~lP~g~~~~~~l~~~ir~~~~~~Gy~eV~tP~l~~~~l~~~sG~~d~~~~~mf~~~d~~~~~~~~LrP~~~~~ 338 (645)
T 1nyr_A 259 VGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPMNCPH 338 (645)
T ss_dssp TEEEEEEECHHHHHHHHHHHHHHHHHHHHTTEEECBCCSEEETHHHHHHTHHHHCTTSSCCCEEETTTEEEEECSSSHHH
T ss_pred CCCceeEECCCHHHHHHHHHHHHHHHHHHcCCEEEECCeeccHHHHhhCCCccccccCcceeEecCCCeEEEeCCCCCHH
Confidence 3789999999999999999999999999999999999999 222 234567899999999999 999999999999
Q ss_pred HHHHHHhCC----CCceeEEEecCeeecCCCC---C--CCcceeEeEEEEeCCCCccch--HHHHHHHHHHHHHcCCCCc
Q 000993 813 FIRWAISNQ----KSSFKRYEISSVYRRAIGH---S--PPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAES 881 (1196)
Q Consensus 813 iaR~~a~~~----~~P~r~~Y~G~VfR~e~~~---~--~~~ef~Q~GvEiiG~~~~~aD--aEvI~la~~~L~~lgi~~~ 881 (1196)
++|+++++. ..|+|+||+|+|||+|+++ + |.|||+|+|+|+||.+++.+| +|+|.++.++|+.||+++
T Consensus 339 ~~~~~~~~~~syr~LPlrl~~~g~~fR~E~~~~~~GL~R~ReF~Q~d~~~f~~~~~~~d~~~e~i~~~~~~l~~lGl~~- 417 (645)
T 1nyr_A 339 HMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFED- 417 (645)
T ss_dssp HHHHHHTSCCBGGGCCEEEEEEEEEECCCCTTTCBTTTBCSEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHTTCCC-
T ss_pred HHHHHHhhhhhccCCCeEEEEeccEEecCCCccccCcceeeeEEEccEEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCe-
Confidence 999998753 4699999999999999886 2 566799999999999999999 999999999999999975
Q ss_pred eEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCC
Q 000993 882 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 961 (1196)
Q Consensus 882 ~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~ 961 (1196)
+.+.+|++... ..-..+|..+.|.... ..+ ++.
T Consensus 418 ~~~~l~~~~~~-~~e~~~g~~e~~~~~~---------------------~~l-~~~------------------------ 450 (645)
T 1nyr_A 418 YSFRLSYRDPE-DKEKYFDDDDMWNKAE---------------------NML-KEA------------------------ 450 (645)
T ss_dssp EEEEEEECCCC-CSSSSSCCHHHHHHHH---------------------HHH-HHH------------------------
T ss_pred EEEEEeCCCcc-cchhhcCChHHHHHHH---------------------HHH-HHH------------------------
Confidence 99999985210 0000112111110000 000 011
Q ss_pred hhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcccccccccc----ccc
Q 000993 962 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLL----AVG 1037 (1196)
Q Consensus 962 ~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I----~~G 1037 (1196)
+...|+.. ..+.+. +..|+..+.|++. ...+.. ...+++ ..+
T Consensus 451 --------------------------l~~~g~~~--~~~~~~--~~~ygpki~~~~~-d~lg~~---~~~gtiq~D~~l~ 496 (645)
T 1nyr_A 451 --------------------------ADELGLSY--EEAIGE--AAFYGPKLDVQVK-TAMGKE---ETLSTAQLDFLLP 496 (645)
T ss_dssp --------------------------HHHHCCCC--CCEESC--SBTTBCEEEEEEC-CTTSCC---EEEEEEEEESSHH
T ss_pred --------------------------HHHcCCCe--EecCCC--CceeCCccceehh-hhhCch---hhcceEEeecccc
Confidence 11112210 111111 2223332333221 000100 000000 113
Q ss_pred cccc-hhhhhccccccccccCCCCCCCcc---eecccHHHHHhhccCC--CCCCCCCCCceEEEEEcCCCchHHHHHHHH
Q 000993 1038 GRYD-YLLHRMWDREYVGYASRTNPPSGV---GASLALETIIQHYPVD--FKPVRNEAGTSVLVCSRGGGGLLVERMELV 1111 (1196)
Q Consensus 1038 GRYD-~L~~~fg~~~~~~~~g~~~~~pAv---Gfaiglerl~~~L~~~--~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a 1111 (1196)
+||| .. ++..|. ...|++ |++.|+||++.+|.+. ...+...+|.+|+|++.+.+....+|.+++
T Consensus 497 ~~~d~~Y---------~~~~g~-~~~P~~ih~~~~GgieR~i~~liE~~~~~~P~~lap~qv~vip~~~~~~~~~a~~i~ 566 (645)
T 1nyr_A 497 ERFDLTY---------IGQDGE-HHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQ 566 (645)
T ss_dssp HHTTCCE---------ECTTSC-EECCEEEEEEEEEEHHHHHHHHHHHHTTCCCTTTCSSCEEEEESSHHHHHHHHHHHH
T ss_pred cccceEE---------ECCCCC-ccCcEEEEeccCCcHHHHHHHHHHHhcCCCCCCCCCceEEEEEcccHHHHHHHHHHH
Confidence 4444 12 111221 235888 8888999999776422 122122367899999984146788999999
Q ss_pred HHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 000993 1112 AELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1187 (1196)
Q Consensus 1112 ~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~ 1187 (1196)
++||++|++|+++.. +.++++++++|+..|+|++|++|++|+++|+|+||++.+++|..++++++++.|++.++.
T Consensus 567 ~~Lr~~Gi~v~~D~~-~~~~g~k~~~a~~~g~p~~iivG~~e~~~~~V~vr~r~~~~~~~v~~~e~~~~l~~~~~~ 641 (645)
T 1nyr_A 567 DELKSQGVRVSIDDR-NEKMGYKIREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFIWNLVDEIRL 641 (645)
T ss_dssp HHHHTTTCCEEECCS-SCCHHHHHHHHHHHTCSEEEEECHHHHHTTEEEEEETTSSCCCEEEHHHHHHHHHHHHHT
T ss_pred HHHHhCCCEEEEECC-CCCHHHHHHHHHhcCCCEEEEEccchhhCCEEEEEECCCCcEEEEEHHHHHHHHHHHHhh
Confidence 999999999998876 579999999999999999999999999999999999999999999999999999988764
|
| >1nj8_A Proline-tRNA synthetase, proline--tRNA ligase; class-II tRNA synthetase; 3.20A {Methanocaldococcus jannaschii} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-35 Score=348.36 Aligned_cols=331 Identities=9% Similarity=0.060 Sum_probs=263.6
Q ss_pred ccccccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec---CCCcccccceEEEeecC----Cc
Q 000993 733 GTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL---GDCPQFKRNTVKLLTHG----GD 801 (1196)
Q Consensus 733 ~~l~~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~---~~~~~~~~~my~f~D~~----G~ 801 (1196)
+.+.....++|++|++|.++.+++.|++.+++.|+++||++|.||+| ++. ++.+.+.++||.|.|.+ |+
T Consensus 19 ~li~~~~~~~G~~d~lP~g~~l~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~~~G~~~~~~~emy~~~d~g~~~~~~ 98 (459)
T 1nj8_A 19 EIYDVRYPIKGCGVYLPYGFKIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKEAEHIKGFEDEVYWVTHGGKTQLDV 98 (459)
T ss_dssp SSCBCCSTTSSCCBBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHHHHCSSSGGGGGGCEEEEESSSSEEEE
T ss_pred CCccccCCCCceEEECChHHHHHHHHHHHHHHHHHHcCCEEeeCCcccCHHHHhhhcCcccccchhhEEEeccCcccCCC
Confidence 33444346799999999999999999999999999999999999999 332 23466789999999987 89
Q ss_pred eEeecCCCcHHHHHHHHhC----CCCceeEEEecCeeecCCC-CC---CCccee-EeEEEEeCCCCccchHH---HHHHH
Q 000993 802 LLELSHELRLPFIRWAISN----QKSSFKRYEISSVYRRAIG-HS---PPNRYL-QGDFDIIGGASALTEAE---VLKVT 869 (1196)
Q Consensus 802 ~laLRPD~T~~iaR~~a~~----~~~P~r~~Y~G~VfR~e~~-~~---~~~ef~-Q~GvEiiG~~~~~aDaE---vI~la 869 (1196)
.++|||+.|++++|+++.+ +..|+|+||+|+|||+|++ +. |.|||+ |+|+|+||.....+|+| +|.++
T Consensus 99 ~l~LRP~~~~~i~~~~~~~~~s~r~LP~rl~qig~~fR~E~~~~rGl~R~REF~qq~d~~~~~~~~~~a~~e~~~~i~~~ 178 (459)
T 1nj8_A 99 KLALRPTSETPIYYMMKLWVKVHTDLPIKIYQIVNTFRYETKHTRPLIRLREIMTFKEAHTAHSTKEEAENQVKEAISIY 178 (459)
T ss_dssp EEEECSSSHHHHHHHHHTTCCBTTSCCCCEEEEECCBCCCCSCCBTTTBCSBCSCEEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred eeEECCCCcHHHHHHHHHhhhhcccCCeEEEEEccEecCccCCCCCceEeeeeeccCcEEEEECCHHHHHHHHHHHHHHH
Confidence 9999999999999999864 3569999999999999987 65 445699 99999999998899998 89999
Q ss_pred HHHHHHcCCCCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHH
Q 000993 870 MDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVN 949 (1196)
Q Consensus 870 ~~~L~~lgi~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~ 949 (1196)
.++++.||+. +.+.+++. .++.
T Consensus 179 ~~~~~~LGl~--~~~~~~~~--------------------------~ek~------------------------------ 200 (459)
T 1nj8_A 179 KKFFDTLGIP--YLISKRPE--------------------------WDKF------------------------------ 200 (459)
T ss_dssp HHHHHHHTCC--CEEEEECT--------------------------TSCC------------------------------
T ss_pred HHHHHHCCCc--eEEeecCc--------------------------hhhc------------------------------
Confidence 9999999995 78877641 0100
Q ss_pred HHHHHHHHhcCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccc
Q 000993 950 RLQTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLV 1029 (1196)
Q Consensus 950 ~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~ 1029 (1196)
.|.. ....++.-+.-|..++.|++|+.=
T Consensus 201 ---------~ga~--------------------------------~~~~ie~~~~dg~~~e~gt~~~lg----------- 228 (459)
T 1nj8_A 201 ---------PGAE--------------------------------YTMAFDTIFPDGRTMQIATVHNLG----------- 228 (459)
T ss_dssp ---------TTCS--------------------------------EEEEEEEECTTSCEEEEEEEEEEE-----------
T ss_pred ---------CCcc--------------------------------cceeEEEEcCCCcEEEEEEEeecc-----------
Confidence 0100 011122222236778899988641
Q ss_pred cccccccccccchhhhhccccccccccCCCCCCCcceecccHHHHHhhcc-C-----CCCCCCCCCCceEEEEEc-CCC-
Q 000993 1030 EGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYP-V-----DFKPVRNEAGTSVLVCSR-GGG- 1101 (1196)
Q Consensus 1030 ~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~-~-----~~~~~~~~~~~~vlv~~~-~~~- 1101 (1196)
...+.+.|+||++.- | ....++++||++| +|++.+|. . +...+...+|.+|+|++. +.+
T Consensus 229 ~~~s~~~~~~Y~~~~---G---------~~~~v~~~~~Gig-eRli~alie~~~d~~gl~~P~~laP~qv~Iipi~~~~~ 295 (459)
T 1nj8_A 229 QNFSKTFEIIFETPT---G---------DKDYAYQTCYGIS-DRVIASIIAIHGDEKGLILPPIVAPIQVVIVPLIFKGK 295 (459)
T ss_dssp THHHHHTTCEEECTT---S---------SEEECEEEEEEEC-THHHHHHHHHHCBTTBCCCCTTSCSSSEEEEECCCSSC
T ss_pred cccccccCeEEECCC---C---------CEeeeeEeeccHH-HHHHHHHHHHhCCCceeEcCCcCCCCcEEEEecccCCc
Confidence 123688999999741 2 2224688999999 99998884 2 112222346789999998 522
Q ss_pred --chHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHH
Q 000993 1102 --GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVR 1179 (1196)
Q Consensus 1102 --~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~ 1179 (1196)
....+|.+++++||+. ++|+++.. +.++++++++|++.|+|++|+||++|+++|+|+||++++++|..++++++++
T Consensus 296 ~~~~~~~a~~l~~~Lr~~-i~v~~D~~-~~~~g~k~~~a~~~G~p~~iiiG~~el~~~~V~vr~r~t~eq~~v~~~el~~ 373 (459)
T 1nj8_A 296 EDIVMEKAKEIYEKLKGK-FRVHIDDR-DIRPGRKFNDWEIKGVPLRIEVGPKDIENKKITLFRRDTMEKFQVDETQLME 373 (459)
T ss_dssp HHHHHHHHHHHHHHHHTT-SCEEECCS-CSCHHHHHHHHHHTTCSEEEEECHHHHHTTEEEEEETTTCCEEEEETTSHHH
T ss_pred HHHHHHHHHHHHHHHhhh-cEEEEECC-CCCHHHHHHHHHHcCCCEEEEECcchhcCCEEEEEECCCCceEEEeHHHHHH
Confidence 5788999999999999 99998876 5799999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh
Q 000993 1180 FLLDAIASQ 1188 (1196)
Q Consensus 1180 ~l~~~l~~~ 1188 (1196)
.|++.++..
T Consensus 374 ~l~~~l~~~ 382 (459)
T 1nj8_A 374 VVEKTLNNI 382 (459)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 998776654
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=345.68 Aligned_cols=240 Identities=14% Similarity=0.172 Sum_probs=186.3
Q ss_pred cCCceEEeeeccCCcEEEEEE-----EEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC---CCCeeeeeeeeee
Q 000993 380 LNDFEELQPLGHGGFGHVVLC-----KNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ---HQHVVRYYQAWFE 451 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a-----~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~---HpnIV~l~~~~~e 451 (1196)
.++|.+.+.||+|+||+||+| .+..+++.||||+++.. ....+.+|+.+++.++ |+||+++++++..
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 367999999999999999999 46778999999998632 2446778888888886 9999999998743
Q ss_pred cCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-----cCCCCHHHHHHHH
Q 000993 452 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-----YDHFDKELAWHLF 525 (1196)
Q Consensus 452 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-----~~~l~e~~~~~i~ 525 (1196)
....|+|||||+ |+|.+++.. ...+++..++.++
T Consensus 139 ----------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~ 178 (365)
T 3e7e_A 139 ----------------------------------------QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFA 178 (365)
T ss_dssp ----------------------------------------SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHH
T ss_pred ----------------------------------------CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHH
Confidence 345699999996 699999974 4569999999999
Q ss_pred HHHHHHHHHHHhCCCcccCCCcCcEEecC-----------CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCc
Q 000993 526 RQIVEGLAHIHGQGIIHRDLTPNNIFFDA-----------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 594 (1196)
Q Consensus 526 ~qIa~gL~yLHs~gIiHrDLKp~NILld~-----------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (1196)
.||+.||+|||++||+||||||+|||++. ++.+||+|||+|+.+..... ....+..
T Consensus 179 ~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~-------------~~~~~~~ 245 (365)
T 3e7e_A 179 MRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPK-------------GTIFTAK 245 (365)
T ss_dssp HHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCT-------------TEEECCS
T ss_pred HHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCC-------------Cceeeee
Confidence 99999999999999999999999999998 89999999999975431110 0122456
Q ss_pred cccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccc
Q 000993 595 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 671 (1196)
Q Consensus 595 ~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~ 671 (1196)
+||+.|||||++.+ ..|+.++|||||||++|||++ ||....... ......+... .......+++..||+
T Consensus 246 ~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~~~l~ 317 (365)
T 3e7e_A 246 CETSGFQCVEMLSN-KPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE-----CKPEGLFRRL--PHLDMWNEFFHVMLN 317 (365)
T ss_dssp SCTTSCCCHHHHTT-CCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-----EEECSCCTTC--SSHHHHHHHHHHHHC
T ss_pred cCCCCCCChHHhcC-CCCCccccHHHHHHHHHHHHhCCCccccCCCCc-----eeechhcccc--CcHHHHHHHHHHHcC
Confidence 89999999999998 569999999999999999997 665433211 0001111111 123467899999999
Q ss_pred CCCCCCCCHHHHHh
Q 000993 672 PSPSDRPSATELLQ 685 (1196)
Q Consensus 672 ~dP~~RPta~eiL~ 685 (1196)
.+|.+|++..+.+.
T Consensus 318 ~~p~~r~~~~~~l~ 331 (365)
T 3e7e_A 318 IPDCHHLPSLDLLR 331 (365)
T ss_dssp CCCTTCCCCHHHHH
T ss_pred CCCCCcchHHHHHH
Confidence 99999976444443
|
| >1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, mRNA, aminoacylati translational regulation, protein/RNA, ligase-RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-35 Score=366.67 Aligned_cols=356 Identities=11% Similarity=0.036 Sum_probs=263.7
Q ss_pred cCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----ee--cCCCcccccceEEEeecCCceEeecCCCcH
Q 000993 738 NRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRL 811 (1196)
Q Consensus 738 ~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~ 811 (1196)
.+.+.|+.||+|.++.+++.|++.+++.+.++||++|.||+| ++ +++.+.+.++||+ .|.+|+.++|||+.|+
T Consensus 257 ~~~~~G~~~~lP~g~~l~~~l~~~~r~~~~~~Gy~ev~tP~l~~~~l~~~sGh~~~~~~~my~-~d~~~~~~~LrP~~~~ 335 (642)
T 1qf6_A 257 QEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCP 335 (642)
T ss_dssp CTTSTTCCEECHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEETHHHHHHSHHHHHGGGCEE-EEETTEEEEECSSSHH
T ss_pred ccCCCCcEEECCcHHHHHHHHHHHHHHHHHHcCCEEEECCcCccHHHHhhcCcccccccccee-eecCCceEEecCCCCH
Confidence 345899999999999999999999999999999999999999 22 2335567899999 9999999999999999
Q ss_pred HHHHHHHhC----CCCceeEEEecCeeecCCC--CC---CCcceeEeEEEEeCCCCccchHH---HHHHHHHHHHHcCCC
Q 000993 812 PFIRWAISN----QKSSFKRYEISSVYRRAIG--HS---PPNRYLQGDFDIIGGASALTEAE---VLKVTMDIVTRFFHA 879 (1196)
Q Consensus 812 ~iaR~~a~~----~~~P~r~~Y~G~VfR~e~~--~~---~~~ef~Q~GvEiiG~~~~~aDaE---vI~la~~~L~~lgi~ 879 (1196)
+++|+++.+ +..|+|+||+|+|||+|.+ +. |.|||+|+|+|+||.+ ..+|+| ++.++.++|+.||+.
T Consensus 336 ~~~~~~~~~~~syr~LPlr~~~~g~~fR~E~~g~~~GL~R~ReF~q~d~~~f~~~-~~~~~e~~~~i~~~~~i~~~lGl~ 414 (642)
T 1qf6_A 336 GHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTE-EQIRDEVNGCIRLVYDMYSTFGFE 414 (642)
T ss_dssp HHHHHHTTSCEEGGGCSEEEEEEEEEECCCCGGGCBTTTBCSEEEEEEEEEEECG-GGHHHHHHHHHHHHHHHHGGGTCC
T ss_pred HHHHHHHhhhhhccccCeEEEEeccEEecCCCccccCCceeeeEEEccEEEEcCH-HHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999874 3469999999999999986 53 4567999999999965 367776 699999999999997
Q ss_pred CceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhc
Q 000993 880 ESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFC 959 (1196)
Q Consensus 880 ~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~ 959 (1196)
+ +.+.++++. -..+|-.+.|..... ..++++...|++... ..
T Consensus 415 ~-~~v~l~~~~-----e~~~g~~e~w~~a~~----------------------~l~~~l~~~g~~~~~----------~~ 456 (642)
T 1qf6_A 415 K-IVVKLSTRP-----EKRIGSDEMWDRAEA----------------------DLAVALEENNIPFEY----------QL 456 (642)
T ss_dssp C-CEEEEECCC-----SSCCSCHHHHHHHHH----------------------HHHHHHHTTTCCCEE----------ET
T ss_pred c-eEEEEecCc-----ccccCCHHHHHHHHH----------------------HHHHHHHHcCCCcEE----------cC
Confidence 4 999999853 011121111110000 001111111111000 00
Q ss_pred CChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccc
Q 000993 960 GAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGR 1039 (1196)
Q Consensus 960 g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGR 1039 (1196)
|. ...+| .++.+-+....|.+||+|++|--|.. +...|+|
T Consensus 457 g~--------------------------~afyg--pk~d~~~~d~~G~~~~~gti~~df~l------------~~r~~~~ 496 (642)
T 1qf6_A 457 GE--------------------------GAFYG--PKIEFTLYDCLDRAWQCGTVQLDFSL------------PSRLSAS 496 (642)
T ss_dssp TC--------------------------SCTTC--CEEEEEEECTTCCEEEEEEEEEESSH------------HHHTTCC
T ss_pred CC--------------------------ccccc--CcccEEEEccCCceEEeeeEEEeccC------------CccCCCE
Confidence 00 00011 23433333345777888887643321 2334566
Q ss_pred cchhhhhccccccccccCCCCCCCccee-cc--cHHHHHhhccCC--CCCCCCCCCceEEEEEcCCCchHHHHHHHHHHH
Q 000993 1040 YDYLLHRMWDREYVGYASRTNPPSGVGA-SL--ALETIIQHYPVD--FKPVRNEAGTSVLVCSRGGGGLLVERMELVAEL 1114 (1196)
Q Consensus 1040 YD~L~~~fg~~~~~~~~g~~~~~pAvGf-ai--glerl~~~L~~~--~~~~~~~~~~~vlv~~~~~~~~~~~a~~~a~~L 1114 (1196)
|-+. . |. ...|++|+ ++ ++||++.+|.++ ...+...+|.+|+|++.+ +....+|.+++++|
T Consensus 497 y~~~---~---------g~-~~~P~~~hrai~G~ieR~i~~liE~~~~~~P~~laP~qv~vipi~-~~~~~~a~~v~~~L 562 (642)
T 1qf6_A 497 YVGE---D---------NE-RKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT-DSQSEYVNELTQKL 562 (642)
T ss_dssp EECT---T---------SC-EECCEEEEEEEEEEHHHHHHHHHHHHTTCCCTTTCSSCEEEEESS-HHHHHHHHHHHHHH
T ss_pred EEec---C---------CC-CcCcEEEEeccCCCHHHHHHHHHHHhcCCCCcccCCceEEEEEeC-HHHHHHHHHHHHHH
Confidence 6322 1 21 23689988 87 899999887532 122223467899999996 77889999999999
Q ss_pred HHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHhh
Q 000993 1115 WEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1188 (1196)
Q Consensus 1115 r~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~~~ 1188 (1196)
|++|++|+++.. +.++++++++|+..|+||+|++|++|+++|+|+||++++++|..++++++++.|++.++..
T Consensus 563 ~~~Gi~v~~D~~-~~~~g~kir~a~~~g~p~~ivvG~~E~~~~~V~vr~r~~~~~~~v~~~e~~~~l~~~~~~~ 635 (642)
T 1qf6_A 563 SNAGIRVKADLR-NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSR 635 (642)
T ss_dssp HTTTCCEEEECC-SSCHHHHHHHHHHTTCSEEEEECTTTGGGCCEEEEESSSCEEEEECHHHHHHHHHHHHHTT
T ss_pred HhCCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEECchhhhcCeEEEEECCCCceEEEEHHHHHHHHHHHHhhh
Confidence 999999998876 6799999999999999999999999999999999999999999999999999999887753
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=329.33 Aligned_cols=239 Identities=27% Similarity=0.407 Sum_probs=188.6
Q ss_pred CCCCCcccCCceEE-eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHH-HhcCCCCeeeeeeeee
Q 000993 373 SLPSSRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATL-SRLQHQHVVRYYQAWF 450 (1196)
Q Consensus 373 ~~~~~~~~~~y~~~-~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL-~~L~HpnIV~l~~~~~ 450 (1196)
.+..+..+++|.+. +.||+|+||.||+|.++.+|+.||||+++. ...+.+|+.++ +.++||||++++++|.
T Consensus 9 ~~~~~~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-------~~~~~~e~~~~~~~~~h~~i~~~~~~~~ 81 (299)
T 3m2w_A 9 QIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYE 81 (299)
T ss_dssp CCBCSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred cCcccccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-------cHHHHHHHHHHHHhccCCCchhHHhhhh
Confidence 34456778999998 779999999999999999999999999863 23567888888 5569999999999874
Q ss_pred ecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcC--CCCHHHHHHHHHH
Q 000993 451 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD--HFDKELAWHLFRQ 527 (1196)
Q Consensus 451 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~--~l~e~~~~~i~~q 527 (1196)
... .....+|+|||||++ +|.+++.... .+++..++.++.|
T Consensus 82 ~~~------------------------------------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~q 125 (299)
T 3m2w_A 82 NLY------------------------------------AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 125 (299)
T ss_dssp EEE------------------------------------TTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHH
T ss_pred hhc------------------------------------CCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHH
Confidence 310 124578999999975 9999998754 6999999999999
Q ss_pred HHHHHHHHHhCCCcccCCCcCcEEecC---CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCch
Q 000993 528 IVEGLAHIHGQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 604 (1196)
Q Consensus 528 Ia~gL~yLHs~gIiHrDLKp~NILld~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 604 (1196)
|+.||+|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 126 i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~---------------------------------- 171 (299)
T 3m2w_A 126 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---------------------------------- 171 (299)
T ss_dssp HHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT----------------------------------
T ss_pred HHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc----------------------------------
Confidence 999999999999999999999999998 7889999999986421
Q ss_pred hccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhh----hcCCCC-CccccCCHHHHHHHHHcccCCCCC
Q 000993 605 IEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLK----QKGELP-PSWVAKFSEQESLLRRLMSPSPSD 676 (1196)
Q Consensus 605 ~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~----~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~ 676 (1196)
+ ..++.++|||||||++|||++ ||.............. .....+ +.+...++++.+||.+||+.||.+
T Consensus 172 ---~-~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~ 247 (299)
T 3m2w_A 172 ---G-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ 247 (299)
T ss_dssp ---T-CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTT
T ss_pred ---c-ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhh
Confidence 0 246789999999999999996 7765544332111100 011111 122456789999999999999999
Q ss_pred CCCHHHHHhccCCCCc
Q 000993 677 RPSATELLQDALPPQM 692 (1196)
Q Consensus 677 RPta~eiL~~~~~~~~ 692 (1196)
|||+.++++|+|+.+.
T Consensus 248 Rps~~e~l~hp~~~~~ 263 (299)
T 3m2w_A 248 RMTITEFMNHPWIMQS 263 (299)
T ss_dssp SCCHHHHHTSHHHHTG
T ss_pred CCCHHHHhcChhhccc
Confidence 9999999999998764
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-35 Score=365.60 Aligned_cols=248 Identities=23% Similarity=0.339 Sum_probs=199.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
.++|++.+.||+|+||.||+|.+..+ +..||||+++.. ......+.+.+|+.+++.++||||+++++++.+
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~----- 462 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVITE----- 462 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST-TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-----
Confidence 46899999999999999999998754 457999987642 334455789999999999999999999988621
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~y 534 (1196)
..+|+|||||+ |+|.+++.... .+++..++.++.||+.||+|
T Consensus 463 ------------------------------------~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~ 506 (656)
T 2j0j_A 463 ------------------------------------NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 506 (656)
T ss_dssp ------------------------------------SSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence 23589999997 69999997654 69999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++.+||+|||+++...... ........+|+.|+|||++.+ ..++.
T Consensus 507 LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~--------------~~~~~~~~~t~~y~aPE~~~~-~~~~~ 571 (656)
T 2j0j_A 507 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST--------------YYKASKGKLPIKWMAPESINF-RRFTS 571 (656)
T ss_dssp HHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC------------------------CCGGGCCHHHHHH-CCCCH
T ss_pred HHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCc--------------ceeccCCCCCcceeCHHHhcC-CCCCc
Confidence 999999999999999999999999999999998653221 011233467889999999987 57899
Q ss_pred cchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 615 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 615 ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++|||||||++|||++ ||......+....... ...++.....++.+.+||.+||+.||.+|||+.++++.
T Consensus 572 ~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~ 645 (656)
T 2j0j_A 572 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN--GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 645 (656)
T ss_dssp HHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHH--TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc--CCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 9999999999999985 7876655554433332 22333344567899999999999999999999999864
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=332.46 Aligned_cols=253 Identities=23% Similarity=0.326 Sum_probs=193.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHh--cCCCCeeeeeeeeeecCccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR--LQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~--L~HpnIV~l~~~~~e~~~~~ 456 (1196)
..++|.+.+.||+|+||.||+|++ +|+.||||++.. .....+.+|+++++. ++||||+++++++....
T Consensus 40 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~-----~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~--- 109 (342)
T 1b6c_B 40 IARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSS-----REERSWFREAEIYQTVMLRHENILGFIAADNKDN--- 109 (342)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECG-----GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC---
T ss_pred ccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCc-----hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC---
Confidence 357899999999999999999998 499999999853 234567889999888 79999999999874321
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
.....+|+|||||++ +|.+++.. ..+++..++.++.||+.||+||
T Consensus 110 ---------------------------------~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~l 155 (342)
T 1b6c_B 110 ---------------------------------GTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHL 155 (342)
T ss_dssp ---------------------------------SSCCCEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CccceeEEEEeecCCCcHHHHHhc-cCccHHHHHHHHHHHHHHHHHH
Confidence 112368999999975 99999975 4699999999999999999999
Q ss_pred H--------hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 536 H--------GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 536 H--------s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
| ++||+||||||+|||++.++.+||+|||+++........ .........||+.|+|||++.
T Consensus 156 H~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~-----------~~~~~~~~~gt~~y~aPE~~~ 224 (342)
T 1b6c_B 156 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT-----------IDIAPNHRVGTKRYMAPEVLD 224 (342)
T ss_dssp HCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTE-----------EEECCCSCCCCGGGCCHHHHT
T ss_pred HHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccc-----------cccccccCCcCcccCCHhhhc
Confidence 9 899999999999999999999999999999765422110 011224457999999999998
Q ss_pred CCCC-----CCCcchhHHHHHHHHHhhc-------------CCchhH----HHHHHHHHhhhcCC---CCCccc--cCCH
Q 000993 608 GWPK-----IDEKADMYSLGIVFFELWH-------------PFSTAM----ERQIVLSDLKQKGE---LPPSWV--AKFS 660 (1196)
Q Consensus 608 ~~~~-----~s~ksDVwSlGviLyELlt-------------Pf~~~~----~~~~~~~~l~~~~~---~p~~~~--~~~~ 660 (1196)
+... ++.++|||||||++|||++ ||.... ........+..... ++..+. ..+.
T Consensus 225 ~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (342)
T 1b6c_B 225 DSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALR 304 (342)
T ss_dssp SCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHH
T ss_pred ccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHH
Confidence 7322 2368999999999999985 454321 11222222222221 222211 2234
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 661 EQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 661 ~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.+.+||.+||+.||.+|||+.+++++
T Consensus 305 ~l~~li~~cl~~dp~~Rps~~~i~~~ 330 (342)
T 1b6c_B 305 VMAKIMRECWYANGAARLTALRIKKT 330 (342)
T ss_dssp HHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHhccChhhCCCHHHHHHH
Confidence 68899999999999999999999976
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-36 Score=344.64 Aligned_cols=269 Identities=19% Similarity=0.224 Sum_probs=189.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC------CchhHHHHHHHHHHHHhcC---------CCCeee
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK------SLPVNDRILREVATLSRLQ---------HQHVVR 444 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~------~~~~~~~~~~Ev~iL~~L~---------HpnIV~ 444 (1196)
.++|++.+.||+|+||+||+|++ +|+.||||+++.... .....+.+.+|+.+|+.++ |||||+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 47899999999999999999998 689999999986542 2233467889999999885 888888
Q ss_pred eeeeeeecCccccCCCCcCCCCccc--ccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHH
Q 000993 445 YYQAWFETGVADFDGDSMWGSGTLA--SSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELA 521 (1196)
Q Consensus 445 l~~~~~e~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~ 521 (1196)
+++++...+.. +..++ ...+...... ............+|+|||||+ |++.+.+.. ..+++..+
T Consensus 97 l~~~~~~~~~~---------hp~iv~~~~~~~~~~~~---~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~ 163 (336)
T 2vuw_A 97 LNSVHCVQGSY---------PPLLLKAWDHYNSTKGS---ANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATA 163 (336)
T ss_dssp EEEEEEEESSC---------CHHHHHHHHHHHHHTCC---SSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHH
T ss_pred hcceeEecCCC---------cHHHHHHHHHHhhhccc---cccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHH
Confidence 88876432100 00000 0000000000 000000112567899999996 455555533 66899999
Q ss_pred HHHHHHHHHHHHHHH-hCCCcccCCCcCcEEecCCC--------------------CeEEeccCcchhccccccccCCCC
Q 000993 522 WHLFRQIVEGLAHIH-GQGIIHRDLTPNNIFFDARN--------------------DIKIGDFGLAKFLKLEQLDQDAAF 580 (1196)
Q Consensus 522 ~~i~~qIa~gL~yLH-s~gIiHrDLKp~NILld~~~--------------------~vKL~DFGlA~~~~~~~~~~~~~~ 580 (1196)
+.++.||+.||+||| ++||+||||||+|||++.++ .+||+|||+|+....
T Consensus 164 ~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~--------- 234 (336)
T 2vuw_A 164 KSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD--------- 234 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET---------
T ss_pred HHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC---------
Confidence 999999999999999 99999999999999999887 899999999986431
Q ss_pred CCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHH-HHHhhc---CCchhHHHHHHHHHhhh----cCC-C
Q 000993 581 PTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV-FFELWH---PFSTAMERQIVLSDLKQ----KGE-L 651 (1196)
Q Consensus 581 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGvi-LyELlt---Pf~~~~~~~~~~~~l~~----~~~-~ 651 (1196)
...+||+.|||||++.+.. +.++|||||+++ .+++++ ||............+.. ... .
T Consensus 235 -----------~~~~gt~~y~aPE~~~g~~--~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (336)
T 2vuw_A 235 -----------GIVVFCDVSMDEDLFTGDG--DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCN 301 (336)
T ss_dssp -----------TEEECCCCTTCSGGGCCCS--SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCC
T ss_pred -----------CcEEEeecccChhhhcCCC--ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccc
Confidence 2348999999999999743 889999998877 666765 55432211111112111 111 1
Q ss_pred CCccccCCHHHHHHHHHcccCCCCCCCCHHHHH-hccCCC
Q 000993 652 PPSWVAKFSEQESLLRRLMSPSPSDRPSATELL-QDALPP 690 (1196)
Q Consensus 652 p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL-~~~~~~ 690 (1196)
++.+...++++.+||++||+.| |+.++| +||||+
T Consensus 302 ~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~ 336 (336)
T 2vuw_A 302 TPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK 336 (336)
T ss_dssp SHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred hhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence 2234456678999999999976 999999 999984
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=368.28 Aligned_cols=263 Identities=25% Similarity=0.306 Sum_probs=198.9
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
...++|++.+.||+|+||.||+|.+..+|+.||||+++.. ........+.+|+.+++.++||||+++++++....
T Consensus 11 ~~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~---- 85 (676)
T 3qa8_A 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQ---- 85 (676)
T ss_dssp ------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC-CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTC----
T ss_pred CCCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccc----
Confidence 3458899999999999999999999999999999988643 34455678999999999999999999998762210
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC---CCCHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---HFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---~l~e~~~~~i~~qIa~gL~ 533 (1196)
........|+|||||+ ++|.+++.... .+++..++.++.||+.||+
T Consensus 86 ------------------------------~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~ 135 (676)
T 3qa8_A 86 ------------------------------KLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135 (676)
T ss_dssp ------------------------------CCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHH
T ss_pred ------------------------------cccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHH
Confidence 0012345689999995 59999998654 5999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEecCCCC---eEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld~~~~---vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 610 (1196)
|||++||+||||||+|||++.++. +||+|||+++...... ......||+.|+|||++.+ .
T Consensus 136 yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~----------------~~~~~~gt~~Y~APE~l~~-~ 198 (676)
T 3qa8_A 136 YLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE----------------LCTEFVGTLQYLAPELLEQ-K 198 (676)
T ss_dssp HHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCC----------------CCCCCCSCCTTCSSCSSCC-S
T ss_pred HHHHCCCccCCCCHHHeEeecCCCceeEEEccccccccccccc----------------ccccccCCcccCChHHhcc-C
Confidence 999999999999999999997765 9999999998643211 1234579999999999987 5
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHH---------H-----hhhcCCC------CC-ccccCCHHHHHHH
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLS---------D-----LKQKGEL------PP-SWVAKFSEQESLL 666 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~---------~-----l~~~~~~------p~-~~~~~~~~l~~LI 666 (1196)
.++.++|||||||++|+|++ ||........... . ....... |. .....++.+.+||
T Consensus 199 ~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI 278 (676)
T 3qa8_A 199 KYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWL 278 (676)
T ss_dssp CCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHH
Confidence 78999999999999999997 7754322211000 0 0000000 11 1112346789999
Q ss_pred HHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 667 RRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 667 ~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
++||..||.+|||+.++++|+||...
T Consensus 279 ~~mL~~DP~kRPTa~elL~hp~F~~l 304 (676)
T 3qa8_A 279 QCMLMWHQRQRGTDPQNPNVGCFQAL 304 (676)
T ss_dssp HHHSCSSCC---CCTTCCCCTTHHHH
T ss_pred HHHccCCHhhCcCHHHHhcCHHHHHH
Confidence 99999999999999999999998753
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-35 Score=351.19 Aligned_cols=275 Identities=15% Similarity=0.109 Sum_probs=193.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCC-CCeeeeeeeeeecCccccC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQH-QHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~H-pnIV~l~~~~~e~~~~~~~ 458 (1196)
.+|...+.||+|+||+||+|++..+|+.||||+++.... .....+.+.+|+.+++.++| +|...+...+--- . .
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~--~--~ 153 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFI--F--P 153 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBC--C--C
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccc--c--c
Confidence 468889999999999999999999999999999874332 22235678999999999987 4332222110000 0 0
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-------cCCCCHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-------YDHFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-------~~~l~e~~~~~i~~qIa~g 531 (1196)
.+.....+.. ................++++|+++.++|.+++.. ...+++..++.++.||+.|
T Consensus 154 ~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~a 223 (413)
T 3dzo_A 154 FDLVKDPQKK----------KMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRL 223 (413)
T ss_dssp CEEEECCC-------------------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccCCCC----------ccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHH
Confidence 0000000000 0000000000111345789999999999988842 2347788899999999999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc----
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ---- 607 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---- 607 (1196)
|+|||++||+||||||+|||++.++.+||+|||+++..... ....+| +.|+|||++.
T Consensus 224 L~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~------------------~~~~~g-~~y~aPE~~~~~~~ 284 (413)
T 3dzo_A 224 LASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS------------------AVSPIG-RGFAPPETTAERML 284 (413)
T ss_dssp HHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTEE------------------ECCCCC-TTTCCHHHHHHHTS
T ss_pred HHHHHhCCcccCCcccceEEEecCCeEEEEeccceeecCCc------------------cccCCC-CceeCchhhhcccc
Confidence 99999999999999999999999999999999998764321 234577 9999999983
Q ss_pred -----CCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC
Q 000993 608 -----GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 679 (1196)
Q Consensus 608 -----~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt 679 (1196)
....++.++|||||||++|||++ ||............ ...+...++++.+||.+||+.||.+|||
T Consensus 285 ~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~dP~~Rpt 357 (413)
T 3dzo_A 285 PFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWI-------FRSCKNIPQPVRALLEGFLRYPKEDRLL 357 (413)
T ss_dssp TTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGG-------GSSCCCCCHHHHHHHHHHTCSSGGGSCC
T ss_pred ccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHH-------HhhcccCCHHHHHHHHHHccCChhhCcC
Confidence 22457889999999999999996 88655432221111 1122345678999999999999999999
Q ss_pred HHHHHhccCCCCchHH
Q 000993 680 ATELLQDALPPQMEYE 695 (1196)
Q Consensus 680 a~eiL~~~~~~~~~~~ 695 (1196)
+.++++|+||.++...
T Consensus 358 ~~~~l~~~~~~~~~~~ 373 (413)
T 3dzo_A 358 PLQAMETPEYEQLRTE 373 (413)
T ss_dssp HHHHTTSHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHH
Confidence 9999999998876433
|
| >3uh0_A Threonyl-tRNA synthetase, mitochondrial; threonine tRNA, threonyl ADE threonyl sulfamoyl adenylate; HET: TSB; 2.00A {Saccharomyces cerevisiae} PDB: 3ugt_A 3ugq_A* 4eo4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-34 Score=341.49 Aligned_cols=350 Identities=10% Similarity=0.023 Sum_probs=255.4
Q ss_pred cCCCCcccccchhhhHhhHHHHHHHHHHH-HHcCCccccccce----ee--cCCCcccccceEEEeec--CCceEeecCC
Q 000993 738 NRDNTSSIQYSDLDTELRDYVVQVTKEMF-RQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTH--GGDLLELSHE 808 (1196)
Q Consensus 738 ~~~~~G~~D~~p~ea~~~~~I~~~i~~~f-~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~--~G~~laLRPD 808 (1196)
.+...|+.+|+|.++.+++.|++.+++.+ +++||++|.||+| ++ .++.+.+.++||.|.|. +|+.++|||+
T Consensus 50 ~~~~~G~~~~lP~g~~l~~~l~~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sGh~~~~~~emy~~~d~~~~~~~l~LrPt 129 (460)
T 3uh0_A 50 DPLSPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWEKSGHWENYADDMFKVETTDEEKEEYGLKPM 129 (460)
T ss_dssp CTTSTTCCEECHHHHHHHHHHHHHHHHHHHHTSCCEECCCCSEEEHHHHHHHTCTTTSGGGSCEECC------CEEECSC
T ss_pred ccCCCCcEEECccHHHHHHHHHHHHHHHHHHhcCCEEEECCeeccHHHHHhcCCccccccceEEEecCCCCCceEEEccc
Confidence 34589999999999999999999999999 9999999999999 22 24466778999999987 4899999999
Q ss_pred CcHHHHHHHHhC----CCCceeEEEecCeeecCCCC---C--CCcceeEeEEEEeCCCCccchHH---HHHHHHHHH-HH
Q 000993 809 LRLPFIRWAISN----QKSSFKRYEISSVYRRAIGH---S--PPNRYLQGDFDIIGGASALTEAE---VLKVTMDIV-TR 875 (1196)
Q Consensus 809 ~T~~iaR~~a~~----~~~P~r~~Y~G~VfR~e~~~---~--~~~ef~Q~GvEiiG~~~~~aDaE---vI~la~~~L-~~ 875 (1196)
.|++++++++.. +..|+|+||+|+|||+|.++ + |.+||+|.|+|+||.++ .+|+| +|.++.+++ +.
T Consensus 130 ~~~~~~~~~~~~~~s~r~LPlrl~~~g~~fR~E~~~~~~GL~R~ReF~q~d~~~f~~~e-~~~~e~~~~i~~~~~~~~~~ 208 (460)
T 3uh0_A 130 NCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALSGLTRLRKFHQDDGHIFCTPS-QVKSEIFNSLKLIDIVYNKI 208 (460)
T ss_dssp SHHHHHHHHTTSCCBGGGCSEEEEECCEEECCCCTTTCBTTTBCSEEEEEEEEEEECGG-GHHHHHHHHHHHHHHHHTTT
T ss_pred CcHHHHHHHHhccccccccCeEEEEecCeeeCCCCCCCCCceeeeeEEEeeEEEEcCHH-HHHHHHHHHHHHHHHHHHHH
Confidence 999999998763 24599999999999999874 3 55679999999998764 56665 999999999 99
Q ss_pred cCCC--------CceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHH
Q 000993 876 FFHA--------ESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAV 947 (1196)
Q Consensus 876 lgi~--------~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~ 947 (1196)
||+. + +.+.++++. -+.+|-.+.|.++.
T Consensus 209 lGl~~~~~~~~~~-~~~~l~t~p-----e~~~G~~~~w~~ae-------------------------------------- 244 (460)
T 3uh0_A 209 FPFVKGGSGAESN-YFINFSTRP-----DHFIGDLKVWNHAE-------------------------------------- 244 (460)
T ss_dssp SCCC-----CCSS-CEEEEECCC-----SSCCSCHHHHHHHH--------------------------------------
T ss_pred cCCCCcccccccc-eEEEEccCC-----cccCCCHHHHHHHH--------------------------------------
Confidence 9997 5 889888742 01123111110000
Q ss_pred HHHHHHHHHHhcCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEe-cCCCCcc
Q 000993 948 VNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFS-VKEKYPA 1026 (1196)
Q Consensus 948 ~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~-~~~~~~~ 1026 (1196)
..|.. +|+..|. .+.++++ .-.|| |.-.++.. ...+..
T Consensus 245 -~~L~~---------------------------------~l~~~g~--~~~~~~g---~gafy-gpkid~~~~d~~gr~- 283 (460)
T 3uh0_A 245 -QVLKE---------------------------------ILEESGK--PWKLNPG---DGAFY-GPKLDIMVTDHLRKT- 283 (460)
T ss_dssp -HHHHH---------------------------------HHHHHTC--CEEEETT---CSCSS-CCEEEEEEECTTSCE-
T ss_pred -HHHHH---------------------------------HHHHhCC--CeeECCC---ccccc-cceEEEEEEccCCCe-
Confidence 00000 1112232 3555655 33366 43334322 111210
Q ss_pred cccccccc----ccccccchhhhhccccccccccCCCCCCCcc----eecccHHHHHhhccC--CCCCCCCCCCceEEEE
Q 000993 1027 TLVEGTLL----AVGGRYDYLLHRMWDREYVGYASRTNPPSGV----GASLALETIIQHYPV--DFKPVRNEAGTSVLVC 1096 (1196)
Q Consensus 1027 ~~~~~~~I----~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAv----Gfaiglerl~~~L~~--~~~~~~~~~~~~vlv~ 1096 (1196)
-+.++| ..+.|||-. | ....| +...|++ +|+ ++||++.+|.+ +...+...+|.+|+|+
T Consensus 284 --~q~~Tiqld~~~~~rf~l~---y-----~~~~g-~~~~P~~ih~~~~G-g~eRli~~Lie~~~g~~P~~laP~qv~Vi 351 (460)
T 3uh0_A 284 --HQVATIQLDFQLPERFDLK---F-----KDQDN-SYKRPIMIHRATFG-SIERFMALLIDSNEGRWPFWLNPYQAVII 351 (460)
T ss_dssp --EEEEEEEEESHHHHHTTCC---E-----ECTTS-CEECCEEEEEEEEE-EHHHHHHHHHHHHTTCCCGGGCSCCEEEE
T ss_pred --eeecccccccccccccceE---E-----ECCCC-CccCcEEEecCcch-HHHHHHHHHHHHcCCCCCCCCCCceEEEE
Confidence 011122 234566533 1 11222 2346887 477 89999998863 2222233578899999
Q ss_pred EcCCCc---hHHHHHHHHHHHHHc--------------CCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeE
Q 000993 1097 SRGGGG---LLVERMELVAELWEE--------------NIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLV 1159 (1196)
Q Consensus 1097 ~~~~~~---~~~~a~~~a~~Lr~~--------------Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v 1159 (1196)
+.+ +. ...+|.+++++||+. |++|+++.. +.++++++++|++.|+|++|+||++|+++|+|
T Consensus 352 pi~-~~~~~~~~~a~~l~~~Lr~~~~~~~~~~~~~~~~Gi~v~~D~~-~~~lg~k~r~Ad~~g~p~~ivvG~~E~~~g~V 429 (460)
T 3uh0_A 352 PVN-TKNVQQLDMCTALQKKLRNELEADDMEPVPLNDWHFNVDLDIR-NEPVGYRIKSAILKNYSYLIIVGDEEVQLQKY 429 (460)
T ss_dssp ESS-TTCHHHHHHHHHHHHHHHCCCCTTSSCCCCTTCCCCCEEECCC-SSCHHHHHHHHHHHTCSEEEEECHHHHHHTCE
T ss_pred Eec-CCcHHHHHHHHHHHHHHHcCcccccccccccCCCCEEEEEECC-CCCHHHHHHHHHHcCCCEEEEEcchhhhCCeE
Confidence 996 55 788999999999999 999998877 67999999999999999999999999999999
Q ss_pred EEEEcCCCc-ccccchHHHHHHHHHHHHh
Q 000993 1160 KVRHLDVKK-EKEVQRESLVRFLLDAIAS 1187 (1196)
Q Consensus 1160 ~vk~l~~g~-q~~v~~~el~~~l~~~l~~ 1187 (1196)
+||++++++ |..++++++++.|++++++
T Consensus 430 tvr~r~~~e~q~~v~~~el~~~l~~~~~~ 458 (460)
T 3uh0_A 430 NIRERDNRKSFEKLTMSQIWEKFIELEKN 458 (460)
T ss_dssp EEEEGGGTTSCEEECHHHHHHHHHHHHHT
T ss_pred EEEECCCCceeEEeeHHHHHHHHHHHHHh
Confidence 999999999 9999999999999998874
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-34 Score=361.01 Aligned_cols=244 Identities=23% Similarity=0.325 Sum_probs=192.9
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEcc-CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKL-DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~-~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
...++|++.+.||+|+||.||+|.+.. +|+.||||++... ........+.+|+.+++.++|||||+++++|.+.+.
T Consensus 77 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~-- 153 (681)
T 2pzi_A 77 IVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS-GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDR-- 153 (681)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECT--
T ss_pred EeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc-CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCC--
Confidence 344899999999999999999999976 7999999988643 334455678999999999999999999998854310
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
.....+|||||||+| +|.+++.. .+++.+++.++.||+.||+||
T Consensus 154 ---------------------------------~~~~~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~l 198 (681)
T 2pzi_A 154 ---------------------------------HGDPVGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYL 198 (681)
T ss_dssp ---------------------------------TSCEEEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCCceeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHH
Confidence 113457999999975 88887654 799999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+|||++.+ .+||+|||+++.... ....+||+.|+|||++.+. ++.+
T Consensus 199 H~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~-------------------~~~~~gt~~y~aPE~~~~~--~~~~ 256 (681)
T 2pzi_A 199 HSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS-------------------FGYLYGTPGFQAPEIVRTG--PTVA 256 (681)
T ss_dssp HHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTC-------------------CSCCCCCTTTSCTTHHHHC--SCHH
T ss_pred HHCCCeecccChHHeEEeCC-cEEEEecccchhccc-------------------CCccCCCccccCHHHHcCC--CCCc
Confidence 99999999999999999875 999999999975421 1345799999999999873 5899
Q ss_pred chhHHHHHHHHHhhcCCchhHHHHHHHHHhhhcCCCC--CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCC
Q 000993 616 ADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELP--PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 689 (1196)
Q Consensus 616 sDVwSlGviLyELltPf~~~~~~~~~~~~l~~~~~~p--~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~ 689 (1196)
+|||||||+||+|++++.+.... . ....+ ......++.+.+||.+||+.||.+||+..+.+.|+|+
T Consensus 257 sDi~slG~~l~~l~~g~~~~~~~------~--~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 324 (681)
T 2pzi_A 257 TDIYTVGRTLAALTLDLPTRNGR------Y--VDGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLT 324 (681)
T ss_dssp HHHHHHHHHHHHHHSCCCEETTE------E--CSSCCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred eehhhhHHHHHHHHhCCCCCccc------c--cccccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence 99999999999999854432210 0 01111 1122345688999999999999999998888887654
|
| >1nj1_A PROR, proline-tRNA synthetase, proline--tRNA ligase; protein-aminoacyladenylate complex class-II tRNA synthetase,; HET: 5CA; 2.55A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1nj2_A 1nj5_A* 1nj6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-33 Score=334.83 Aligned_cols=331 Identities=10% Similarity=0.069 Sum_probs=264.6
Q ss_pred ccccccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC---CcccccceEEEeecC----Cc
Q 000993 733 GTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD---CPQFKRNTVKLLTHG----GD 801 (1196)
Q Consensus 733 ~~l~~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~---~~~~~~~my~f~D~~----G~ 801 (1196)
+.+......+|+.|++|.++.+++.|++.+++.|++ ||++|.||+| ++.+. .+.+.++||+|.|.+ |+
T Consensus 52 glid~~~~~~G~~~~~P~g~~l~~~i~~~~~~~~~~-G~~ei~tP~l~~~~l~~~~sG~~~~f~~emy~~~d~g~~~~~~ 130 (501)
T 1nj1_A 52 EIIDQRYPVKGMHVWMPHGFMIRKNTLKILRRILDR-DHEEVLFPLLVPEDELAKEAIHVKGFEDEVYWVTHGGLSKLQR 130 (501)
T ss_dssp TCEECCCSSTTCCEECHHHHHHHHHHHHHHHHHHTT-TCEECCCCSEEEHHHHTTSHHHHHHTTTTCCEEEEETTEEEEE
T ss_pred CCccccCCCCceEEECccHHHHHHHHHHHHHHHHHc-CCEEEecCcEecHHHHhcccCCcccCCcceEEEecCCCcccCC
Confidence 333333456999999999999999999999999999 9999999999 34332 335689999999976 78
Q ss_pred eEeecCCCcHHHHHHHHhC----CCCceeEEEecCeeecCCC-CCC---Cccee-EeEEEEeCCCCccchHHH---HHHH
Q 000993 802 LLELSHELRLPFIRWAISN----QKSSFKRYEISSVYRRAIG-HSP---PNRYL-QGDFDIIGGASALTEAEV---LKVT 869 (1196)
Q Consensus 802 ~laLRPD~T~~iaR~~a~~----~~~P~r~~Y~G~VfR~e~~-~~~---~~ef~-Q~GvEiiG~~~~~aDaEv---I~la 869 (1196)
.++|||+.|++++|+++.+ +..|+|+||+|+|||+|++ +.+ .+||+ |++++++|.....+|+|+ |.++
T Consensus 131 ~l~LrPt~e~~i~~~~~~~~~s~~~LPlr~~q~g~~fR~E~~~~rGl~R~REF~~q~e~~~~~~~~e~a~~e~~~~l~~~ 210 (501)
T 1nj1_A 131 KLALRPTSETVMYPMFALWVRSHTDLPMRFYQVVNTFRYETKHTRPLIRVREITTFKEAHTIHATASEAEEQVERAVEIY 210 (501)
T ss_dssp EEEECSSSHHHHHHHHHHHCCBTTTCCEEEEEEEEEECCCCSCCBTTTBCSEEEEEEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred eeEEccCCCHHHHHHHHhhhcccccCCEEEEeecCEeeCCCCCCCCCceeEEEeeeeeEEEEECCHHHHHHHHHHHHHHH
Confidence 9999999999999999874 2569999999999999887 544 45699 999999998888888884 9999
Q ss_pred HHHHHHcCCCCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHH
Q 000993 870 MDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVN 949 (1196)
Q Consensus 870 ~~~L~~lgi~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~ 949 (1196)
.++|+.||+. +.+.++.. .++ +
T Consensus 211 ~~i~~~Lgl~--~~~~~~~~--------------------------~e~-----------------------~------- 232 (501)
T 1nj1_A 211 KEFFNSLGIP--YLITRRPP--------------------------WDK-----------------------F------- 232 (501)
T ss_dssp HHHHHHHTCC--CEEEECCT--------------------------TTS-----------------------C-------
T ss_pred HHHHHHCCCe--EEEEeCCc--------------------------hhh-----------------------c-------
Confidence 9999999995 88877531 000 0
Q ss_pred HHHHHHHHhcCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccc
Q 000993 950 RLQTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLV 1029 (1196)
Q Consensus 950 ~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~ 1029 (1196)
.+. ...+.++..++.|..|+.|.+|+.- .
T Consensus 233 ---------~~a--------------------------------~~~~die~~l~~g~~~ei~t~~~lg---~------- 261 (501)
T 1nj1_A 233 ---------PGS--------------------------------EYTVAFDTLMPDGKTLQIGTVHNLG---Q------- 261 (501)
T ss_dssp ---------TTC--------------------------------SEEEEEEEECTTSCEEEEEEEEEEE---T-------
T ss_pred ---------CCc--------------------------------ccceEEEEEcCCCCEEEEEEEEecc---c-------
Confidence 000 0124566666668888999998651 1
Q ss_pred cccccccccccchhhhhccccccccccCCCCCCCcceecccHHHHHhhccCC------CCCCCCCCCceEEEEEc-C-CC
Q 000993 1030 EGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVD------FKPVRNEAGTSVLVCSR-G-GG 1101 (1196)
Q Consensus 1030 ~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~------~~~~~~~~~~~vlv~~~-~-~~ 1101 (1196)
..+.+.|+||++- . |. ...++++||+++ +|++.+|.+. ...+....|.+|+|++. + ++
T Consensus 262 -~~a~~~~~ry~~~--~-g~---------~~~~h~~g~Gig-eRli~aliE~~~d~~Gl~~P~~laP~qV~Iipi~~~~~ 327 (501)
T 1nj1_A 262 -TFARTFEIKFETP--E-GD---------HEYVHQTCYGLS-DRVIASVIAIHGDESGLCLPPDVAAHQVVIVPIIFKKA 327 (501)
T ss_dssp -HHHHHHTCEEECT--T-SC---------EEECEEEEEEEC-THHHHHHHHHTCCSSSEECCTTTSSCSEEEEECCSSSS
T ss_pred -cchhhcCeEEECC--C-CC---------EEeeeeccccHH-HHHHHHHHHHcCcccCccCCccccCceEEEEEeccCCc
Confidence 1268899999873 1 22 123567899999 9999887421 11222346789999998 4 32
Q ss_pred --chHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHH
Q 000993 1102 --GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVR 1179 (1196)
Q Consensus 1102 --~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~el~~ 1179 (1196)
....+|.+++++||+.|++|+++.. +.++++++++|++.|+|++|+||++|+++|+|+||++++++|..++++++++
T Consensus 328 ~~~~~~~a~~l~~~Lr~~Gi~v~~D~~-~~s~g~k~~~a~~~G~p~~iiiG~~e~~~~~V~vr~r~t~eq~~v~~~el~~ 406 (501)
T 1nj1_A 328 AEEVMEACRELRSRLEAAGFRVHLDDR-DIRAGRKYYEWEMRGVPLRVEIGPRDLEKGAAVISRRDTGEKVTADLQGIEE 406 (501)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCEEECCC-SSCHHHHHHHHHHEECSEEEEECHHHHTTTEEEEEESSSCCEEEEETTTHHH
T ss_pred hHHHHHHHHHHHHHHHhCCCEEEEECC-CCCHHHHHHHHHhcCCCEEEEECcchhhCCEEEEEECCCCceEEEeHHHHHH
Confidence 5788999999999999999998876 5799999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh
Q 000993 1180 FLLDAIASQ 1188 (1196)
Q Consensus 1180 ~l~~~l~~~ 1188 (1196)
.|++.++..
T Consensus 407 ~l~~~l~~~ 415 (501)
T 1nj1_A 407 TLRELMKDI 415 (501)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 998776643
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-33 Score=314.69 Aligned_cols=222 Identities=14% Similarity=0.074 Sum_probs=177.2
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
..++|++.+.||+|+||.||+|++..+|+.||||++...... ......+.+|+.+++.++||||+++++++.+
T Consensus 29 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~------ 102 (286)
T 3uqc_A 29 ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT------ 102 (286)
T ss_dssp TTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE------
T ss_pred ecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE------
Confidence 346799999999999999999999999999999999765433 3445789999999999999999999998733
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+|||||+ ++|.+++... ....++..++.||+.||+|||
T Consensus 103 ----------------------------------~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~i~~ql~~aL~~lH 146 (286)
T 3uqc_A 103 ----------------------------------RAGGLVVAEWIRGGSLQEVADTS--PSPVGAIRAMQSLAAAADAAH 146 (286)
T ss_dssp ----------------------------------TTEEEEEEECCCEEEHHHHHTTC--CCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCcEEEEEEecCCCCHHHHHhcC--CChHHHHHHHHHHHHHHHHHH
Confidence 346899999997 5999998543 466678999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++.+||+++| |++| ++.++
T Consensus 147 ~~givH~Dikp~NIll~~~g~~kl~~~~-----------------------------------~~~~--------~~~~~ 183 (286)
T 3uqc_A 147 RAGVALSIDHPSRVRVSIDGDVVLAYPA-----------------------------------TMPD--------ANPQD 183 (286)
T ss_dssp HTTCCCCCCSGGGEEEETTSCEEECSCC-----------------------------------CCTT--------CCHHH
T ss_pred HCCCccCCCCcccEEEcCCCCEEEEecc-----------------------------------ccCC--------CCchh
Confidence 9999999999999999999999998443 3332 68899
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhh-hcCCCCC---ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLK-QKGELPP---SWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~-~~~~~p~---~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||||||++|||++ ||.............. .....++ .....++++.+||.+||+.||.+| |+.++++.
T Consensus 184 Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~ 259 (286)
T 3uqc_A 184 DIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNL 259 (286)
T ss_dssp HHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHH
Confidence 99999999999997 8865433211000000 0111111 123567789999999999999999 99999874
|
| >2zt5_A Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP, Gly-AMP, aminoacyl-tRNA synthetase, ATP-binding, charcot-marie-tooth disease, disease mutation; HET: B4P; 2.50A {Homo sapiens} PDB: 2pme_A* 2zt6_A* 2zt7_A* 2zt8_A* 2zxf_A* 2pmf_A 2q5h_A 2q5i_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=323.04 Aligned_cols=402 Identities=12% Similarity=0.037 Sum_probs=231.4
Q ss_pred hhccccccccc----CCCCcccccchhhhHhhHHHHHHHHHHHH-HcCCccccccce----ee--cCCCcccc-------
Q 000993 728 MKHHAGTLRLN----RDNTSSIQYSDLDTELRDYVVQVTKEMFR-QHCAKHLEIEPM----YL--LGDCPQFK------- 789 (1196)
Q Consensus 728 ~~~~~~~l~~~----~~~~G~~D~~p~ea~~~~~I~~~i~~~f~-~~Gy~~I~tP~~----~~--~~~~~~~~------- 789 (1196)
+....+++.-. ....|+.||+|.++++++.|++.|++.|. ..||.+|.||++ ++ +++.+.+.
T Consensus 73 l~~r~gf~~~~~eiy~g~~G~~d~lP~G~~l~~~Ie~~~r~~~~~~~g~~EV~tP~l~~~~lwk~SGH~~~f~d~m~~~~ 152 (693)
T 2zt5_A 73 TLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFMVKDV 152 (693)
T ss_dssp HHHHTTSEEETTGGGTCCTTCEEECHHHHHHHHHHHHHHHHHTHHHHTCEECCCCSEEEHHHHHHHTHHHHCEEEEEEBS
T ss_pred HHHhCCCcccchhhcCCCCCeEEECCChHHHHHHHHHHHHHHHHHhcCcEEEEeCCcccHHHHhhcCCcccccccceeec
Confidence 33344555433 23489999999999999999999999998 569999999999 22 23333332
Q ss_pred --cceEEEeec---------------------------------------------------------------------
Q 000993 790 --RNTVKLLTH--------------------------------------------------------------------- 798 (1196)
Q Consensus 790 --~~my~f~D~--------------------------------------------------------------------- 798 (1196)
++||+| |+
T Consensus 153 ~~~e~yr~-D~l~e~~~~~~~~~~~~~~~~~~e~~~~~~~l~~~~~eel~~li~~~~~~~P~~g~~~~~~~~fnlmf~t~ 231 (693)
T 2zt5_A 153 KNGECFRA-DHLLKAHLQKLMSDKKCSVEKKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPVSFNLMFKTF 231 (693)
T ss_dssp SSCCEEEH-HHHHHHHHHHHHHSTTCCHHHHHHHHHHHTTTTTCCHHHHHHHHHHTTCBCSSSCCBBCCCEEEECCCEEE
T ss_pred cCCceeec-cHhHHHHHHHhhccccccHHHHHHHHHHHhhccCCCHHHHHHHHHHcCCCCCCCCCCCCCcchhheeeecc
Confidence 456665 33
Q ss_pred ----CCceEeecCCCcHHH----HHHHHhC-CCCceeEEEecCeeecC-CCCCC---CcceeEeEEEEeCCCCcc-----
Q 000993 799 ----GGDLLELSHELRLPF----IRWAISN-QKSSFKRYEISSVYRRA-IGHSP---PNRYLQGDFDIIGGASAL----- 860 (1196)
Q Consensus 799 ----~G~~laLRPD~T~~i----aR~~a~~-~~~P~r~~Y~G~VfR~e-~~~~~---~~ef~Q~GvEiiG~~~~~----- 860 (1196)
+|+.+.||||.|.++ +|.+..+ +..|+|+||+|++||+| +|+.| .|||+|+++|+||.++..
T Consensus 232 igp~~~~~~~LRPEtaqg~f~~f~r~~~~~~~~LP~~~aqiG~~fRnEisPr~GLlR~REF~q~d~e~F~~p~~~~~~~y 311 (693)
T 2zt5_A 232 IGPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEKDHPKF 311 (693)
T ss_dssp CSSSSSSEEEECSCSHHHHHTTHHHHHHHTTTCSCEEEEEEEEEECCCSSCCSGGGSCSEEEEEEEEEEECTTCCCCTTG
T ss_pred ccCCCCcceeeccccchHHHHHHHHHHHHhCcCCCEEEEeecceecCCCCCCCCCccceeeEEccceEEeCcchhcchhH
Confidence 468899999999998 8988774 67799999999999998 77754 457999999999987765
Q ss_pred ---chHH------------------------------------HHHHHHHHHHHcCCCCceEEEeCcH--HHHHHHHH--
Q 000993 861 ---TEAE------------------------------------VLKVTMDIVTRFFHAESCDIHLNHG--DLLEAIWS-- 897 (1196)
Q Consensus 861 ---aDaE------------------------------------vI~la~~~L~~lgi~~~~~i~Lg~~--~i~~~~l~-- 897 (1196)
+|+| +|.++.++|..+|+.. ..+.+... .-......
T Consensus 312 ~~v~da~~~~~~~~~~~~~~~~~~~~~~ea~~~g~i~~e~~~~~i~~~~~f~~~lGi~~-~~~~~~~~~~~e~a~ya~~~ 390 (693)
T 2zt5_A 312 QNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFIGRIYLYLTKVGISP-DKLRFRQHMENEMAHYACDC 390 (693)
T ss_dssp GGTTTCEEEEECHHHHHTTCCCEEEEHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTCCG-GGEEEEECCGGGSCTTCSSE
T ss_pred HHHHHHHHhhhhhhhhccccccccchhhhhhhhcccchHHHHHHHHHHHHHHHHcCcCc-cEEEEeccCchhhccchhhh
Confidence 3433 8999999999999974 33333211 00000000
Q ss_pred -------HcC------CCHHHHHHHHHHHHH-hcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChh
Q 000993 898 -------WAG------IKAEHREKVAELLAM-MGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAAD 963 (1196)
Q Consensus 898 -------~lg------l~~~~~~~l~~~l~~-~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~ 963 (1196)
..| ..+...-.|...... ...+. ... +.......+... +..........+ ..++.
T Consensus 391 ~d~e~~~~~g~~e~~~~a~r~~~dL~~~~~~s~~~l~--~~~-~~~~p~~~~~~~----~~~~~~~~g~~i----~~~Ap 459 (693)
T 2zt5_A 391 WDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPLV--AEK-PLKEPKTVNVVQ----FEPSKGAIGKAY----KKDAK 459 (693)
T ss_dssp EEEEEEETTEEEEEEEEECCCSHHHHHHHHHHTCCCC--EEE-C------------------------------------
T ss_pred hhehhhccCChHHHHHHHHHHHHHHHHHHHHhccchh--hhc-ccCcccceeeee----ecCChHHHHHHH----Hhccc
Confidence 000 000000011111111 11010 000 000000000000 000000000000 00000
Q ss_pred hHHHHHhccCCCChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccc
Q 000993 964 QALPRLRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD 1041 (1196)
Q Consensus 964 ~~l~~l~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD 1041 (1196)
.+.+.|. ....+.++++ .|...|. -.+.+| |++|++..... +--||+
T Consensus 460 ~i~d~L~------~~~~~~~~~l~~~L~~~g~-i~i~vd-----------Gt~Fei~~~~~-------------~~~~y~ 508 (693)
T 2zt5_A 460 LVMEYLA------ICDECYITEMEMLLNEKGE-FTIETE-----------GKTFQLTKDMI-------------NVKRFQ 508 (693)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhh------hhhHHHHHHHHHHHHhcCC-EEEEEC-----------CEEEEeccccc-------------ceeeEE
Confidence 1111111 1122333333 4444551 123334 68888853210 011343
Q ss_pred hhhhhccccccccccCCCCCCCcc-eecccHHHHHhhccCC-------------CCCCCCCCCceEEEEEcCCC-chHHH
Q 000993 1042 YLLHRMWDREYVGYASRTNPPSGV-GASLALETIIQHYPVD-------------FKPVRNEAGTSVLVCSRGGG-GLLVE 1106 (1196)
Q Consensus 1042 ~L~~~fg~~~~~~~~g~~~~~pAv-Gfaiglerl~~~L~~~-------------~~~~~~~~~~~vlv~~~~~~-~~~~~ 1106 (1196)
.. ..|+ +.+|+| |+|+|++||+.+|.+. ...+...++.+|+|++.+.+ ....+
T Consensus 509 ~~--~~Gg----------ry~P~Vi~~s~GigRli~aLie~~~~~~~~~~~r~g~~~P~~lAP~qV~Vipl~~~~~~~~~ 576 (693)
T 2zt5_A 509 KT--LYVE----------EVVPNVIEPSFGLGRIMYTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPF 576 (693)
T ss_dssp -----CCE----------EECCEEEEEEEEHHHHHHHHHHHHEEECSSTTCCEEECCCTTTSSCSEEEEESCCSTTTHHH
T ss_pred ec--cCCc----------EecCcceeCeehHHHHHHHHHHHhccccccccccccccCCCCCCCCeEEEEEecCcHHHHHH
Confidence 21 1111 113888 9999999999887421 11122235789999999632 37899
Q ss_pred HHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcc--cCCeEEEEEcCCCcccccchHHHHHHHHHH
Q 000993 1107 RMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGA--QKGLVKVRHLDVKKEKEVQRESLVRFLLDA 1184 (1196)
Q Consensus 1107 a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~--~~g~v~vk~l~~g~q~~v~~~el~~~l~~~ 1184 (1196)
|.++++.||+.|++|++++. +.++++++++|++.|+||+|+||++|+ ++|+|+||++++++|..++++++++.|++.
T Consensus 577 A~~l~~~Lr~~Gi~v~~D~~-~~sigkk~k~Ad~~G~p~~IiIG~~El~~~~g~Vtvr~r~t~eq~~v~l~el~~~l~~~ 655 (693)
T 2zt5_A 577 VKELSEALTRHGVSHKVDDS-SGSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQDL 655 (693)
T ss_dssp HHHHHHHHHHTTCCEEECCC-CSCHHHHHHHHHHTTCCEEEEECHHHHTSSSCEEEEEETTTCCEEEEETTTHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEEcchhhhccCCEEEEEECCCCceEEEeHHHHHHHHHHH
Confidence 99999999999999998775 579999999999999999999999999 999999999999999999999999999877
Q ss_pred HH
Q 000993 1185 IA 1186 (1196)
Q Consensus 1185 l~ 1186 (1196)
++
T Consensus 656 l~ 657 (693)
T 2zt5_A 656 AN 657 (693)
T ss_dssp HT
T ss_pred Hh
Confidence 64
|
| >1ati_A Glycyl-tRNA synthetase; protein biosynthesis, ligase, aminoacyl-tRNA SYN; 2.75A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1b76_A* 1ggm_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.1e-29 Score=300.28 Aligned_cols=344 Identities=13% Similarity=0.045 Sum_probs=237.1
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHH--HcCCccccccce----ee--cCCCcccccceEE-----------------
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFR--QHCAKHLEIEPM----YL--LGDCPQFKRNTVK----------------- 794 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~--~~Gy~~I~tP~~----~~--~~~~~~~~~~my~----------------- 794 (1196)
.+.|+.||+|..+.+++.|++.+++.|. ++||.+|.||++ ++ +++.+.+.+.||+
T Consensus 27 ~~~G~~d~~P~G~~l~~~l~~~~r~~~~~~~~g~~ev~tP~l~~~~l~~~SGh~~~f~d~m~~~~~~~~~~r~d~l~~~~ 106 (505)
T 1ati_A 27 GLQGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRLVLHYSGHEATFADPMVDNRITKKRYRLDHLLKEQ 106 (505)
T ss_dssp CCTTCEEECHHHHHHHHHHHHHHHHHHTTSCSSEEEEBCCSEEETTHHHHTSHHHHCEEEEEEC----------------
T ss_pred CCCCcceeCccHHHHHHHHHHHHHHHHHHhhCCcEEEEccccCCHHHHHhcCChhhcCccceeccccccccchhhhhhhh
Confidence 4589999999999999999999999999 999999999999 11 2223333344443
Q ss_pred --------------------E------e-----------------ecC-------------------------CceEeec
Q 000993 795 --------------------L------L-----------------THG-------------------------GDLLELS 806 (1196)
Q Consensus 795 --------------------f------~-----------------D~~-------------------------G~~laLR 806 (1196)
| . +.+ ++.+.||
T Consensus 107 ~~~~~~~~~~~~~~~~e~~~~~~~~~i~~p~~~~~~m~~~~~~cp~~~~~~~~~~~~~fnlmf~t~~gpt~ee~~~~~LR 186 (505)
T 1ati_A 107 PEEVLKRLYRAMEVEEENLHALVQAMMQAPERAGGAMTAAGVLDPASGEPGDWTPPRYFNMMFQDLRGPRGGRGLLAYLR 186 (505)
T ss_dssp ----------------------------------------------------CCCCEEEECBEEEECSSCCCGGGEEEEC
T ss_pred hhhhccccccccccHHHHHHHHHhhccccccccccccccccccCCccCccccccccchhhhhhhcccCCccccccceeec
Confidence 3 2 112 4678999
Q ss_pred CCCcHHH----HHHHHhC-CCCceeEEEecCeeecC-CCCC---CCcceeEeEEEEeCCCCccc--hHHHHHHHHHHHHH
Q 000993 807 HELRLPF----IRWAISN-QKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASALT--EAEVLKVTMDIVTR 875 (1196)
Q Consensus 807 PD~T~~i----aR~~a~~-~~~P~r~~Y~G~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~~a--DaEvI~la~~~L~~ 875 (1196)
|+.|.++ +|.+.++ +..|+|+||+|++||+| +|+. |.|||+|.++|+||.++... +++++.++.++++.
T Consensus 187 PE~t~~i~~~~~~~~~sy~r~LP~rl~qig~~FR~E~~pr~GL~R~REF~q~d~~~f~~~e~~~~~~~~~i~~~~~i~~~ 266 (505)
T 1ati_A 187 PETAQGIFVNFKNVLDATSRKLGFGIAQIGKAFRNEITPRNFIFRVREFEQMEIEYFVRPGEDEYWHRYWVEERLKWWQE 266 (505)
T ss_dssp SSSHHHHHHTHHHHHHHHTCCSSEEEEEEEEEEBCCSSCCTGGGSCSEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHhcCCCCCEEEEEeeceeeCCCCCCCCCCcccceEEeeEEEEECHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 8888887 78899999999999998 7774 45579999999999888765 78999999999999
Q ss_pred cCCCCceEEEeCcHHHHHHHHHHcC-CCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHH
Q 000993 876 FFHAESCDIHLNHGDLLEAIWSWAG-IKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTV 954 (1196)
Q Consensus 876 lgi~~~~~i~Lg~~~i~~~~l~~lg-l~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l 954 (1196)
||+.. +.+.+.... . +.+. ..... ....... ..+|. + + .++
T Consensus 267 LGl~~-~~v~~~~~~--~---~~~~~~~~~~--------~d~E~~~------p~~~~----e-~--~g~----------- 308 (505)
T 1ati_A 267 MGLSR-ENLVPYQQP--P---ESSAHYAKAT--------VDILYRF------PHGSL----E-L--EGI----------- 308 (505)
T ss_dssp TTCCG-GGEEEEECC--T---TTSCTTCSEE--------EEEEEEE------TTEEE----E-E--EEE-----------
T ss_pred cCCCe-EEEEECCCC--h---HhhhcccHHH--------HhHHhhc------CCCCc----c-c--hhh-----------
Confidence 99974 455443310 0 0000 00000 0000000 00000 0 0 000
Q ss_pred HHHhcCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcccccccccc
Q 000993 955 GLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLL 1034 (1196)
Q Consensus 955 ~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I 1034 (1196)
..+++. .+..- .. ..+.. .++.+. ..+-|+++.|+++..
T Consensus 309 --~~~~d~--~L~~~---~~---------------~~~~~-~~~~~~----~~n~~~~~~~~y~d~-------------- 347 (505)
T 1ati_A 309 --AQRTDF--DLGSH---TK---------------DQEAL-GITARV----LRNEHSTQRLAYRDP-------------- 347 (505)
T ss_dssp --EECTTH--HHHHH---CS---------------STTTT-TCCSCC----CCCSCCCSCCCEECS--------------
T ss_pred --hcccce--ecchh---hc---------------ccccc-ceeeee----cccccceeEEEEEcC--------------
Confidence 000000 00000 00 00000 011111 123378888777532
Q ss_pred ccccccchhhhhccccccccccCCCCCCCcceecccHHHHHhhccCC---------C------CCCCCCCCceEEEEEcC
Q 000993 1035 AVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVD---------F------KPVRNEAGTSVLVCSRG 1099 (1196)
Q Consensus 1035 ~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~~---------~------~~~~~~~~~~vlv~~~~ 1099 (1196)
.+|+||- .+++|||+|+||++.+|.+. . ..+...++.+|+|++.+
T Consensus 348 ~g~~~y~--------------------p~vig~s~GieRli~alle~~~~~~~~~~gd~~~gl~~p~~laP~~v~Vip~~ 407 (505)
T 1ati_A 348 ETGKWFV--------------------PYVIEPSAGVDRGVLALLAEAFTREELPNGEERIVLKLKPQLAPIKVAVIPLV 407 (505)
T ss_dssp SSCCEEC--------------------CEEEEEEEEHHHHHHHHHHHHEEEEECTTSCEEEEECCCGGGCSCSEEEEESC
T ss_pred CCCeeec--------------------ceEEEEeeEHHHHHHHHHHHHhhhcccccccccccccCCcccCCceEEEEEcC
Confidence 1456762 13999999999998776521 1 11112367899999986
Q ss_pred CC---chHHHHHHHHHHHHHcC-CeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCccc---------CCeEEEEEcCC
Q 000993 1100 GG---GLLVERMELVAELWEEN-IKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQ---------KGLVKVRHLDV 1166 (1196)
Q Consensus 1100 ~~---~~~~~a~~~a~~Lr~~G-i~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~---------~g~v~vk~l~~ 1166 (1196)
+ +...+|.+++++||+.| ++|+++.. +++++++++|++.|+|++|+||++|++ +|+|+||++++
T Consensus 408 -~~~~~~~~~a~~l~~~Lr~~G~i~v~~D~~--~sig~k~~~ad~~g~p~~iivG~~el~~~~~~~~~~~g~V~vr~r~t 484 (505)
T 1ati_A 408 -KNRPEITEYAKRLKARLLALGLGRVLYEDT--GNIGKAYRRHDEVGTPFAVTVDYDTIGQSKDGTTRLKDTVTVRDRDT 484 (505)
T ss_dssp -SSCHHHHHHHHHHHHHHHTTCSSCEEECCC--SCHHHHHHHHHHTTCSEEEEECHHHHTCCTTSCCTTTTEEEEEETTT
T ss_pred -CccHHHHHHHHHHHHHHhccCCEEEEECCC--CCHHHHHHHHHHCCCCEEEEEChHHhhhccccccccCCEEEEEECCC
Confidence 4 57889999999999999 99997654 699999999999999999999999999 99999999999
Q ss_pred CcccccchHHHHHHHHHHH
Q 000993 1167 KKEKEVQRESLVRFLLDAI 1185 (1196)
Q Consensus 1167 g~q~~v~~~el~~~l~~~l 1185 (1196)
++|..++++++++.|++.+
T Consensus 485 ~~q~~v~~~el~~~l~~~l 503 (505)
T 1ati_A 485 MEQIRLHVDELEGFLRERL 503 (505)
T ss_dssp CCEEEEEHHHHHHHHHHHH
T ss_pred CceEEEEHHHHHHHHHHHh
Confidence 9999999999999998765
|
| >4hvc_A Bifunctional glutamate/proline--tRNA ligase; ligase-ligase inhibitor complex; HET: ANP HFG; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.9e-27 Score=281.29 Aligned_cols=325 Identities=9% Similarity=-0.021 Sum_probs=236.3
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec---CCCcccccceEEEeecCCc----eEeecCC
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL---GDCPQFKRNTVKLLTHGGD----LLELSHE 808 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~---~~~~~~~~~my~f~D~~G~----~laLRPD 808 (1196)
..+|+.+++|.++.+++.|++.+++.+.++||++|.||.| ++. ++.+.+.++||.|.|.+++ .++|||+
T Consensus 49 ~~~G~~~~lP~G~~i~~~L~~~~~~~~~~~Gy~ev~tP~l~~~~l~~k~sGh~~~f~~emy~~~d~g~~~l~e~l~LrPt 128 (519)
T 4hvc_A 49 DISGCYILRPWAYAIWEAIKDFFDAEIKKLGVENCYFPMFVSQSALEKEKTHVADFAPEVAWVTRSGKTELAEPIAIRPT 128 (519)
T ss_dssp SSTTCEEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHTTSCCSCGGGGGGCEEEEEETTEEEEEEEEECSS
T ss_pred CCCCeEEECccHHHHHHHHHHHHHHHHHHcCCEEEeccccccHHHHhcccCCcccccccceEEeccCCcccccceeeCCC
Confidence 5789999999999999999999999999999999999999 333 3456678999999998764 6999999
Q ss_pred CcHHHHHHHHhC----CCCceeEEEecCeeecC-CCCC---CCcceeEeEEEEeCCCCccchHHH---HHHHHHHHHHc-
Q 000993 809 LRLPFIRWAISN----QKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASALTEAEV---LKVTMDIVTRF- 876 (1196)
Q Consensus 809 ~T~~iaR~~a~~----~~~P~r~~Y~G~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~~aDaEv---I~la~~~L~~l- 876 (1196)
.|++++++++.. +.+|+|++|+|+|||+| +++. |.+||+|.++++|+.....+++|+ +.+..++++.|
T Consensus 129 se~~i~~~~~~~i~SyrdLPlrl~q~g~~fR~E~~~~~Gl~R~ReF~q~e~h~~~~~~e~a~~E~~~~l~~~~~i~~~ll 208 (519)
T 4hvc_A 129 SETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHPQPFLRTREFLWQEGHSAFATMEEAAEEVLQILDLYAQVYEELL 208 (519)
T ss_dssp SHHHHHHHHHHHCSSGGGCCEEEEEEEEEECCCCSCCBTTTBCSEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CcHHHHHHHHhhccccccCCeEEEEEcCeeeCCCCCCCCCcceeEEEEeeEEEEecCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999988773 34699999999999998 6554 445699999999888888888875 56678888886
Q ss_pred CCCCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 000993 877 FHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGL 956 (1196)
Q Consensus 877 gi~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~ 956 (1196)
|+. +.+.+.+. .++
T Consensus 209 ~lp--~~~~~~t~--------------------------~e~-------------------------------------- 222 (519)
T 4hvc_A 209 AIP--VVKGRKTE--------------------------KEK-------------------------------------- 222 (519)
T ss_dssp CCC--CEEEECCT--------------------------TTS--------------------------------------
T ss_pred CCc--ceeeecCC--------------------------ccc--------------------------------------
Confidence 664 54433210 010
Q ss_pred HhcCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEc---CCCCCCCCCccceEEEEEecCCCCccccccccc
Q 000993 957 RFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYID---ALMPPIESYHRNLFFQVFSVKEKYPATLVEGTL 1033 (1196)
Q Consensus 957 ~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~D---l~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~ 1033 (1196)
+.|.. ..+.++ +++.|.. -.|++|..
T Consensus 223 -~~Ga~--------------------------------~t~~iEa~~p~~gr~~--q~gT~~~L---------------- 251 (519)
T 4hvc_A 223 -FAGGD--------------------------------YTTTIEAFISASGRAI--QGGTSHHL---------------- 251 (519)
T ss_dssp -CTTSS--------------------------------EEEEEEEEETTTTEEE--EEEEEEEE----------------
T ss_pred -cCCch--------------------------------hheeeeeeeccCCCEE--eecccccc----------------
Confidence 00100 001111 1111111 13444332
Q ss_pred cccccccchhhhhccccccccc--cCCCCCCCcceecccHHHHHhhccC------CCCCCCCCCCceEEEEEcCC-----
Q 000993 1034 LAVGGRYDYLLHRMWDREYVGY--ASRTNPPSGVGASLALETIIQHYPV------DFKPVRNEAGTSVLVCSRGG----- 1100 (1196)
Q Consensus 1034 I~~GGRYD~L~~~fg~~~~~~~--~g~~~~~pAvGfaiglerl~~~L~~------~~~~~~~~~~~~vlv~~~~~----- 1100 (1196)
| +++.++|+-.- ... -|....+--.+|+++ +|++.+|.+ +...+...+|.+|+|++++.
T Consensus 252 ---g---~~~s~~~~i~y-~d~~~~g~~~~vh~~~~Gi~-~R~l~aliE~~~d~~gl~~P~~laP~qV~Iipi~~~~~~~ 323 (519)
T 4hvc_A 252 ---G---QNFSKMFEIVF-EDPKIPGEKQFAYQNSWGLT-TRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNALS 323 (519)
T ss_dssp ---E---THHHHHHTCEE-ECTTSTTCEEECEEEEEEEE-THHHHHHHHHHCBTTBCCCCTTTCSCSEEEEECCC---CC
T ss_pred ---c---chhhhhcCcEE-eccccCCCEEEEEEccccHH-HHHHHHHHHHhCccccccccccCCCeEEEEEEecCccccc
Confidence 1 23333343110 000 111121222367777 999888752 22233346788999999852
Q ss_pred ----CchHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHH
Q 000993 1101 ----GGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRES 1176 (1196)
Q Consensus 1101 ----~~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~e 1176 (1196)
+....+|.++++.||+.|++|++++...+++++++++|+..|+|++|+||++|+++|+|+||++++|++..+++++
T Consensus 324 ~~~~e~~~~~a~~l~~~L~~~Girv~~Ddr~~~s~G~K~~~ael~GiP~~ivIG~kele~g~V~vr~R~tgeq~~v~~~e 403 (519)
T 4hvc_A 324 EEDKEALIAKCNDYRRRLLSVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVRRDTGEKLTVAENE 403 (519)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEECCCSSSCHHHHHHHHHHTTCSEEEEECHHHHHHTEEEEEETTTCCEEEEEGGG
T ss_pred chhhHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHhcCCCEEEEECchhhcCCeEEEEECCCCCccceeHHH
Confidence 2456789999999999999999887743589999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhc
Q 000993 1177 LVRFLLDAIASQF 1189 (1196)
Q Consensus 1177 l~~~l~~~l~~~~ 1189 (1196)
+++.|++.++.+-
T Consensus 404 l~~~l~~ll~~i~ 416 (519)
T 4hvc_A 404 AETKLQAILEDIQ 416 (519)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999987776543
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-28 Score=300.29 Aligned_cols=186 Identities=18% Similarity=0.166 Sum_probs=133.0
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC--------chhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCccc
Q 000993 386 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS--------LPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 386 ~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~--------~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~~ 456 (1196)
....+.|++|.+..++....|+.||||++...... ....+++.+|+++|+++ .|+||+++++++.
T Consensus 239 ~~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~e------ 312 (569)
T 4azs_A 239 QNQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGE------ 312 (569)
T ss_dssp ECC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEE------
T ss_pred hhccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEE------
Confidence 34578899999999888889999999999754211 12335699999999999 7999999998872
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
+...+|||||||+| +|.++|...+++++. .|+.||+.||+||
T Consensus 313 ----------------------------------d~~~~yLVMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~yl 355 (569)
T 4azs_A 313 ----------------------------------NAQSGWLVMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAAL 355 (569)
T ss_dssp ----------------------------------CSSEEEEEEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHH
T ss_pred ----------------------------------ECCEEEEEEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHH
Confidence 35678999999976 999999998889875 4789999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++|||||||||+||||+.+|++||+|||+|+...... ...++.+||+.|||||++.+ .+..+
T Consensus 356 H~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~---------------~~~~t~vGTp~YmAPE~l~g--~~~~~ 418 (569)
T 4azs_A 356 EKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC---------------SWPTNLVQSFFVFVNELFAE--NKSWN 418 (569)
T ss_dssp HHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC------------------CCSHHHHHHHHHHHHHHC---------
T ss_pred HHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC---------------ccccCceechhhccHHHhCC--CCCCc
Confidence 99999999999999999999999999999998653221 12345689999999999987 46788
Q ss_pred chhHHHHHHHHHhhcC
Q 000993 616 ADMYSLGIVFFELWHP 631 (1196)
Q Consensus 616 sDVwSlGviLyELltP 631 (1196)
+|+||+|+++++|.++
T Consensus 419 ~d~~s~g~~~~~l~~~ 434 (569)
T 4azs_A 419 GFWRSAPVHPFNLPQP 434 (569)
T ss_dssp ----------CCCCTT
T ss_pred ccccccccchhhhccc
Confidence 9999999999998754
|
| >3ial_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, prors, cysrs, RS, translation, ATP-binding, nucleotide-binding; HET: PR8; 2.20A {Giardia lamblia atcc 50803} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.1e-25 Score=265.63 Aligned_cols=315 Identities=10% Similarity=0.068 Sum_probs=226.7
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecC---CCcccccceEEEeecC----CceEeecC
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG---DCPQFKRNTVKLLTHG----GDLLELSH 807 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~---~~~~~~~~my~f~D~~----G~~laLRP 807 (1196)
..++|+.+|+|.++.+++.|++.+++.++++||++|.||.| ++.. +.+.+.++||.|.|.+ |+.++|||
T Consensus 42 ~~~~G~~~~lP~G~~i~~~L~~~~~~~~~~~Gy~eV~tP~l~~~el~~k~sgh~~~f~~emy~v~d~g~~~~~~~l~LrP 121 (518)
T 3ial_A 42 YPVKGCVVFRPYGFFMENAIMRLCEEEYAKVGISQILFPTVIPESFLKKESDHIKGFEAECFWVEKGGLQPLEERLALRP 121 (518)
T ss_dssp SSSTTCCEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHTSSHHHHHHHGGGCEEEEEETTEEEEEEEEECS
T ss_pred CCCCCeEEECccHHHHHHHHHHHHHHHHHHcCCEEEEcccccCHHHHHhhcCCcccccccEEEEecCCCcccCcceeECC
Confidence 46799999999999999999999999999999999999999 3322 2455789999999976 68999999
Q ss_pred CCcHHHHHHHHhC----CCCceeEEEecCeeecC-CCCC---CCcceeEeEEEEeCCCCccchHHHHHH---HHHHH-HH
Q 000993 808 ELRLPFIRWAISN----QKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASALTEAEVLKV---TMDIV-TR 875 (1196)
Q Consensus 808 D~T~~iaR~~a~~----~~~P~r~~Y~G~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~~aDaEvI~l---a~~~L-~~ 875 (1196)
+.|++++++++.. +.+|+|+||+|+|||+| +++. |.+||+|.++++||.....++.|++.+ ..+++ +.
T Consensus 122 t~e~~i~~~~~~~i~SyrdLPlrl~q~~~~fR~E~~~~~GL~R~REF~q~e~h~f~~~~e~a~~e~~~~l~~~~~i~~~~ 201 (518)
T 3ial_A 122 TSETAIYSMFSKWVRSYKDLPLKIHQTCTIFRHETKNTKPLIRVREIHWNEAHCCHATAEDAVSQLSDYWKVIDTIFSDE 201 (518)
T ss_dssp SSHHHHHHHHHHHCCBGGGCCEEEEEEEEEECTTCCSCBTTTBCSEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCcHHHHHHHHhhhcccccCCeEEEEEeceecCCCCCCCCCceeeEEEEeeEEEEECCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999988763 35699999999999998 5654 455799999999998888888877655 58888 88
Q ss_pred cCCCCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHH
Q 000993 876 FFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVG 955 (1196)
Q Consensus 876 lgi~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~ 955 (1196)
||+. +.+..- ++ .++.
T Consensus 202 LGlp--~~~~~~--------------~~------------~e~~------------------------------------ 217 (518)
T 3ial_A 202 LCFK--GQKLRR--------------VC------------WDRF------------------------------------ 217 (518)
T ss_dssp TCCC--CEEEEE--------------CG------------GGCC------------------------------------
T ss_pred cCCc--EEeeec--------------Ch------------hhcc------------------------------------
Confidence 8885 443210 00 0100
Q ss_pred HHhcCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccc
Q 000993 956 LRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLA 1035 (1196)
Q Consensus 956 ~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~ 1035 (1196)
.|. ...+.+|.-+.-|-..-.|++|..
T Consensus 218 ---~gA--------------------------------~yt~~iE~~~pdgr~ie~gt~~~L------------------ 244 (518)
T 3ial_A 218 ---PGA--------------------------------DYSEVSDVVMPCGRVLQTAGIHNL------------------ 244 (518)
T ss_dssp ---TTC--------------------------------SEEEEEEEECTTSCEEEEEEEEEE------------------
T ss_pred ---CCC--------------------------------ccceEEEEEcCCCCEEEEeceecc------------------
Confidence 000 012233332221211223333321
Q ss_pred cccccchhhhhccccccccccCCCCCCCcc-eecccHHHHHhhccC------CCCCCCCCCCceEEEEEcCC--------
Q 000993 1036 VGGRYDYLLHRMWDREYVGYASRTNPPSGV-GASLALETIIQHYPV------DFKPVRNEAGTSVLVCSRGG-------- 1100 (1196)
Q Consensus 1036 ~GGRYD~L~~~fg~~~~~~~~g~~~~~pAv-Gfaiglerl~~~L~~------~~~~~~~~~~~~vlv~~~~~-------- 1100 (1196)
|- ++.++|+-. +...-|... .|-. -++++ +|++.+|.+ +...+...+|.+|.|+++..
T Consensus 245 -g~---~~s~rf~i~-y~d~~g~~~-~~h~~~~G~~-~R~iaaliE~~~de~Gl~lP~~LAP~qV~IiPi~~~~~~~~~~ 317 (518)
T 3ial_A 245 -GQ---RFSSTFDIL-YANKANESV-HPYLTCAGIS-TRVLACALSIHGDSGGLVLPPLIAPIHVVIIPIGCGKKNNQES 317 (518)
T ss_dssp -ET---HHHHHTTCC-EECTTCCEE-CCEEEEEEEE-THHHHHHHHHHCBTTBCCCCGGGCSCSEEEEEESCSCTTCHHH
T ss_pred -cc---hhhhhcCcE-EECCCCCEe-eeEEeccchH-HHHHHHHHHHhCCCCccccCCccceEEEEEEEeecCccccccc
Confidence 11 223334311 011112222 2322 22333 999877641 22333346788999999863
Q ss_pred -CchHHHHHHHHHHHHHc-CCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCc--ccccchHH
Q 000993 1101 -GGLLVERMELVAELWEE-NIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKK--EKEVQRES 1176 (1196)
Q Consensus 1101 -~~~~~~a~~~a~~Lr~~-Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~--q~~v~~~e 1176 (1196)
+....+|.++++.|++. |++|+++...+.+++++++.|+.+|+|+.|+||++|+++|+|+|+++++++ +..+++++
T Consensus 318 ~~~~~~~a~~l~~~L~~~~Girv~~Ddr~~~s~G~K~~~ael~GvP~~i~vG~ke~e~g~V~vr~Rd~~~~~k~~v~~~e 397 (518)
T 3ial_A 318 DQQVLGKVNEIADTLKSKLGLRVSIDDDFSKSMGDKLYYYELKGVPLRIEVGQRDLANGQCIVVPRDVGKDQKRVIPITE 397 (518)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCEEECCCTTSCHHHHHHHHHHTTCSEEEEEEHHHHHTTEEEEEETTTCGGGCEEEEHHH
T ss_pred hHHHHHHHHHHHHHHHhccCeEEEEECCCCCCHHHHHHHHHHcCCCEEEEECcchhhCCEEEEEECCCCccceeEeeHHH
Confidence 23567899999999999 999998776467999999999999999999999999999999999999999 99999999
Q ss_pred H
Q 000993 1177 L 1177 (1196)
Q Consensus 1177 l 1177 (1196)
+
T Consensus 398 l 398 (518)
T 3ial_A 398 V 398 (518)
T ss_dssp H
T ss_pred H
Confidence 9
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.3e-23 Score=255.46 Aligned_cols=185 Identities=21% Similarity=0.196 Sum_probs=133.7
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCch------hHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 385 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP------VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 385 ~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~------~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..+.||+|+||+||+|.+ .++.+|+|+...+..... ..+++.+|+.+|+.++||||+++..++..
T Consensus 340 ~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~------- 410 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD------- 410 (540)
T ss_dssp --------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE-------
T ss_pred CCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe-------
Confidence 356899999999999944 588999998765432221 13458999999999999999954433321
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
....|||||||+ ++|.+++.. +..++.||++||+|||+
T Consensus 411 ---------------------------------~~~~~lVmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~ 449 (540)
T 3en9_A 411 ---------------------------------LDNKRIMMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHK 449 (540)
T ss_dssp ---------------------------------TTTTEEEEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCccEEEEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHH
Confidence 123489999997 699999876 66899999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC-CCCCCcc
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKA 616 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~s~ks 616 (1196)
+||+||||||+|||++. ++||+|||+|+.......... +......+.+||+.|||||++... ..|+..+
T Consensus 450 ~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~--------~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~ 519 (540)
T 3en9_A 450 NDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAV--------DLIVFKKAVLSTHHEKFDEIWERFLEGYKSVY 519 (540)
T ss_dssp TTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHH--------HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHC
T ss_pred CcCccCCCCHHHEEECC--eEEEEECccCEECCCcccccc--------chhhhhhhhcCCCCcCCHHHHHHHHHHHHHHH
Confidence 99999999999999998 999999999987643211000 000012356899999999998751 2378889
Q ss_pred hhHHHHHHHHHhh
Q 000993 617 DMYSLGIVFFELW 629 (1196)
Q Consensus 617 DVwSlGviLyELl 629 (1196)
|+||..+-..+..
T Consensus 520 d~ws~vl~~l~~v 532 (540)
T 3en9_A 520 DRWEIILELMKDV 532 (540)
T ss_dssp TTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 9999887666554
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.1e-21 Score=218.75 Aligned_cols=133 Identities=21% Similarity=0.183 Sum_probs=106.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc----------------hhHHHHHHHHHHHHhcCCCCeeee
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----------------PVNDRILREVATLSRLQHQHVVRY 445 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~----------------~~~~~~~~Ev~iL~~L~HpnIV~l 445 (1196)
.|.+.+.||+|+||.||+|.+ .+|+.||||+++...... .....+.+|+.+|+.++ | +++
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v 166 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAV 166 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSS
T ss_pred EEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCc
Confidence 456679999999999999999 789999999996432211 13456889999999999 4 555
Q ss_pred eeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHH
Q 000993 446 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHL 524 (1196)
Q Consensus 446 ~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i 524 (1196)
++++ + ....|+|||||+| +|.+ +.. .....+
T Consensus 167 ~~~~-~----------------------------------------~~~~~lvmE~~~g~~L~~-l~~------~~~~~i 198 (282)
T 1zar_A 167 PKVY-A----------------------------------------WEGNAVLMELIDAKELYR-VRV------ENPDEV 198 (282)
T ss_dssp CCEE-E----------------------------------------EETTEEEEECCCCEEGGG-CCC------SCHHHH
T ss_pred CeEE-e----------------------------------------ccceEEEEEecCCCcHHH-cch------hhHHHH
Confidence 5543 1 1234899999975 8887 421 335579
Q ss_pred HHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcch
Q 000993 525 FRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 567 (1196)
Q Consensus 525 ~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~ 567 (1196)
+.||+.||+|||++||+||||||+|||++ ++.+||+|||+|+
T Consensus 199 ~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a~ 240 (282)
T 1zar_A 199 LDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQSV 240 (282)
T ss_dssp HHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTTCE
T ss_pred HHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCCCe
Confidence 99999999999999999999999999999 9999999999986
|
| >3ikl_A DNA polymerase subunit gamma-2, mitochondrial; transferase; HET: DNA; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-18 Score=204.06 Aligned_cols=310 Identities=15% Similarity=0.051 Sum_probs=197.9
Q ss_pred ccc-ccchhhhHhhHHHHHHHHHHHHH-cC-Ccccccccee---ecCCCcccccceEEEeecCCceEeecCCCcHHHHHH
Q 000993 743 SSI-QYSDLDTELRDYVVQVTKEMFRQ-HC-AKHLEIEPMY---LLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRW 816 (1196)
Q Consensus 743 G~~-D~~p~ea~~~~~I~~~i~~~f~~-~G-y~~I~tP~~~---~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~ 816 (1196)
|.. ||.|..+.+++.|++.++.-|.. .| +.+|+||... .+++++.+. ++||| +|+|..=.
T Consensus 94 g~~p~~gP~G~~l~~nl~~~w~~~~~~~~~~~~eV~tp~~~~~~~SGH~d~~~-------------~~LRP-eTaqg~~~ 159 (459)
T 3ikl_A 94 GCHPGFGPLGVELRKNLAAEWWTSVVVFREQVFPVDALHHKPGPLLPGDSAFR-------------GGLRE-NLLHGALE 159 (459)
T ss_dssp TCSCCBCHHHHHHHHHHHHHHHHHHTTSSCSCEECCCCSBCCSCCCSSCSCCT-------------TB-CS-CSHHHHHH
T ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhccCceEeeccccccccccCcchhhhc-------------ceECC-CCChhHHH
Confidence 444 99999999999999988877763 66 6669999972 233343333 89999 77765421
Q ss_pred H-----HhCC-CCceeEEEecCeeecCC----CC---CCCcceeEeEEEEeCCCCccch--HHHHHHHHHHHHHcCCCCc
Q 000993 817 A-----ISNQ-KSSFKRYEISSVYRRAI----GH---SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAES 881 (1196)
Q Consensus 817 ~-----a~~~-~~P~r~~Y~G~VfR~e~----~~---~~~~ef~Q~GvEiiG~~~~~aD--aEvI~la~~~L~~lgi~~~ 881 (1196)
. ..++ ..|+|++.+|++||+|. +. -|.+||+|+.+++|..++...+ ..++..+..+++.||+..
T Consensus 160 nfk~~~~s~r~~LP~~iaqig~~FR~E~g~~~~~~GL~RvrEFtq~E~~~F~~Pe~~~e~~~~~~~~~~~~~~~LGi~~- 238 (459)
T 3ikl_A 160 HYVNCLDLVNKRLPYGLAQIGVCFHPVFDTKQIRNGVKSIGEKTEASLVWFTPPRTSNQWLDFWLRHRLQWWRKFAMSP- 238 (459)
T ss_dssp HTTTTTGGGTTBSSEEEEEEEEEECCC----------CCCCEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHHCSSG-
T ss_pred HHhhhhhhccccCCeEEEEEeeeeecccccccCCCCcccccceeeeeEEEEeChhHHHHHHHHHHHHHHHHHHHhCCCh-
Confidence 1 1122 46999999999999984 22 3556799999999998766444 367777888888888752
Q ss_pred eEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCC
Q 000993 882 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 961 (1196)
Q Consensus 882 ~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~ 961 (1196)
..+.+.+. . +++ ..+
T Consensus 239 ~~~r~~~~----------~-~ee----------A~~-------------------------------------------- 253 (459)
T 3ikl_A 239 SNFSSSDC----------Q-DEE----------GRK-------------------------------------------- 253 (459)
T ss_dssp GGEEEEEE----------C-CSS----------SSC--------------------------------------------
T ss_pred hhEEEeec----------C-chH----------HHh--------------------------------------------
Confidence 22222210 0 000 000
Q ss_pred hhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccc
Q 000993 962 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD 1041 (1196)
Q Consensus 962 ~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD 1041 (1196)
.+.+...+.-| -+. |+..+.-..+ .........|=+|-
T Consensus 254 ----------------------------------~~DiE~~~p~G----~~E-~~g~sn~tDf---qL~~~~~~~~~~~~ 291 (459)
T 3ikl_A 254 ----------------------------------GNKLYYNFPWG----KEL-IETLWNLGDH---ELLHMYPGNVSKLH 291 (459)
T ss_dssp ----------------------------------EEEEEEECSSC----EEE-EEEEEEEETH---HHHHHSCSCSSSSC
T ss_pred ----------------------------------hcCeEEEcCCc----eEE-Eeeeeccchh---hhhccccccCceeE
Confidence 11111111101 000 0000000000 00000011111111
Q ss_pred hhhhhccccccccccCCCCCCCc-ceecccHHHHH-hhccCC------------------CCCCCCCCCceEEEEEcC--
Q 000993 1042 YLLHRMWDREYVGYASRTNPPSG-VGASLALETII-QHYPVD------------------FKPVRNEAGTSVLVCSRG-- 1099 (1196)
Q Consensus 1042 ~L~~~fg~~~~~~~~g~~~~~pA-vGfaiglerl~-~~L~~~------------------~~~~~~~~~~~vlv~~~~-- 1099 (1196)
..-|.++.+|. +.-++|++|++ .+|++. ...+...+|.+|.|+ ..
T Consensus 292 ------------~~dg~~k~~P~vi~~s~Gv~R~~~AiLe~~~de~~~~~~~~~~~~R~vl~lP~~LAP~qV~Ii-i~~~ 358 (459)
T 3ikl_A 292 ------------GRDGRKNVVPCVLSVNGDLDRGMLAYLYDSFQLTENSFTRKKNLHRKVLKLHPCLAPIKVALD-VGRG 358 (459)
T ss_dssp ------------CBSSSCBCCCEEEEEEEEHHHHHHHHHHTTCC-------------CCCCCCCTTTCSCCEEEE-ESSC
T ss_pred ------------ccCCCeeeeeEEEEecccHHHHHHHHHHHHhhhccccccccccccceEEEeCcccCCceEEEE-eCCC
Confidence 01122223454 47789999975 555421 122223578888888 43
Q ss_pred -CCchHHHHHHHHHHHHHcCCeEEEeeCC--CCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHH
Q 000993 1100 -GGGLLVERMELVAELWEENIKAQFVPVP--DPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRES 1176 (1196)
Q Consensus 1100 -~~~~~~~a~~~a~~Lr~~Gi~vel~~~~--~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q~~v~~~e 1176 (1196)
+++...+|.+++++||+.|++|++.++. +.++++++++|++.|+||+|+||++|+++|+|+||++++++|..+++++
T Consensus 359 ~~e~~~~~A~~L~~~Lr~~GIrV~~d~Ddr~~~siGkK~r~Ad~iGiPy~IiVG~kEle~g~VtVR~Rdtgeq~~v~lde 438 (459)
T 3ikl_A 359 PTLELRQVCQGLFNELLENGISVWPGYLETMQSSLEQLYSKYDEMSILFTVLVTETTLENGLIHLRSRDTTMKEMMHISK 438 (459)
T ss_dssp CSTTHHHHHHHHHHHHHHTSCCEECGGGSSSCCTTHHHHHHHGGGTCSEEEEECTTSTTSSEEEEEETTTCCCCCEETTH
T ss_pred CCHHHHHHHHHHHHHHHHCCCeEEEeecCCcCCCHHHHHHHHHHcCCCEEEEECchhhhCCEEEEEECCCCceEEEEHHH
Confidence 2567889999999999999999843332 4799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh
Q 000993 1177 LVRFLLDAIAS 1187 (1196)
Q Consensus 1177 l~~~l~~~l~~ 1187 (1196)
+++.|++.+++
T Consensus 439 li~~l~~~i~~ 449 (459)
T 3ikl_A 439 LKDFLIKYISS 449 (459)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999988775
|
| >1g5h_A Mitochondrial DNA polymerase accessory subunit; intermolecular four helix bundle, DNA binding protein; 1.95A {Mus musculus} SCOP: c.51.1.1 d.104.1.1 PDB: 1g5i_A 2g4c_A* 3ikm_B* | Back alignment and structure |
|---|
Probab=99.80 E-value=5e-20 Score=219.14 Aligned_cols=318 Identities=14% Similarity=0.065 Sum_probs=197.4
Q ss_pred ccc-ccchhhhHhhHHHHHHHHHH-H-HHcCCccccccce----eecCC--Cc-----ccccc----------eEEEe-e
Q 000993 743 SSI-QYSDLDTELRDYVVQVTKEM-F-RQHCAKHLEIEPM----YLLGD--CP-----QFKRN----------TVKLL-T 797 (1196)
Q Consensus 743 G~~-D~~p~ea~~~~~I~~~i~~~-f-~~~Gy~~I~tP~~----~~~~~--~~-----~~~~~----------my~f~-D 797 (1196)
|+. ||+|..+.+++.|++.+++. | .+.||.+|.||++ ++... +. .+.++ ||.+. +
T Consensus 52 G~~~~~~P~G~~l~~~i~~~~~~~~~~~~~g~~ev~tp~l~~~~~~~~s~~g~~~r~d~~~e~~~~~g~~~eem~~~~~~ 131 (454)
T 1g5h_A 52 GCHARFGPLGVELRKNLASQWWSSMVVFREQVFAVDSLHQEPGSSQPRDSAFRLVSPESIREILQDREPSKEQLVAFLEN 131 (454)
T ss_dssp CCSCCBCHHHHHHHHHHHHHHHHHHTTTCTTEEECCCCSEECCCCSSCCCCCEEECHHHHHHHHCC---CHHHHHHHHHH
T ss_pred cceeeeCchHHHHHHHHHHHHHHHHhhhcCCeEEEEcCccCChhhccccccCcccHHHHHHHHhhccCCCHHHHHHHHHh
Confidence 777 99999999999999988887 4 6999999999998 22211 11 22222 33221 1
Q ss_pred cCCceEeecCCCcHHH-----HHHHHhCC-CCceeEEEecCeee---cCC-CC---CCCcceeEeEEEEeCCCCccch--
Q 000993 798 HGGDLLELSHELRLPF-----IRWAISNQ-KSSFKRYEISSVYR---RAI-GH---SPPNRYLQGDFDIIGGASALTE-- 862 (1196)
Q Consensus 798 ~~G~~laLRPD~T~~i-----aR~~a~~~-~~P~r~~Y~G~VfR---~e~-~~---~~~~ef~Q~GvEiiG~~~~~aD-- 862 (1196)
..++.+.||| +|+|. .+.+..++ ..|++++++|++|| +|. +. .|.|||+|.++++|+..+...+
T Consensus 132 ~~~~~~~LRP-eta~g~~~~f~~~~~s~r~~LP~~~aqig~~fR~~~nE~s~~~Gl~R~REF~q~E~~~F~~pe~~~e~~ 210 (454)
T 1g5h_A 132 LLKTSGKLRA-TLLHGALEHYVNCLDLVNRKLPFGLAQIGVCFHPVSNSNQTPSSVTRVGEKTEASLVWFTPTRTSSQWL 210 (454)
T ss_dssp HHHHSCEECS-CSHHHHHHTHHHHHHHTTTBSCEEEEEEEEEEEEEC---------CEEEEEEEEEEEEEECHHHHHHHH
T ss_pred hcCcceeecc-cccHHHHHHHhhhHhhcccCCCEEEEEeeeeccCCcccccCCCCccccCceehhheEEEeCHhhHHHHH
Confidence 1246789999 77753 23333344 67999999999999 574 32 2445799999999985322111
Q ss_pred HHHHHHHHHHHHHcCCCCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcC
Q 000993 863 AEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELN 942 (1196)
Q Consensus 863 aEvI~la~~~L~~lgi~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~ 942 (1196)
..++.+..+++..||+.. ..+.+.. . -
T Consensus 211 ~~~~~~~~~~~~~lgi~~-~~~r~~~----------~----------------~-------------------------- 237 (454)
T 1g5h_A 211 DFWLRHRLLWWRKFAMSP-SNFSSAD----------C----------------Q-------------------------- 237 (454)
T ss_dssp HHHHHHHHHHHHTTCSSG-GGEEEEE----------E----------------E--------------------------
T ss_pred HHHHHHHHHHHHHcCCCc-eeEEecC----------C----------------H--------------------------
Confidence 123555556666666542 1111100 0 0
Q ss_pred CcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChHHHHHHHHHHHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCC
Q 000993 943 LAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKE 1022 (1196)
Q Consensus 943 l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~ 1022 (1196)
+. + + ...+.++..+. +.-+. |++.
T Consensus 238 -----------------~~--~----a------------------------~~~~~ie~~~p----~g~~e-~~g~---- 261 (454)
T 1g5h_A 238 -----------------DE--L----G------------------------RKGSKLYYSFP----WGKEP-IETL---- 261 (454)
T ss_dssp -----------------CT--T----S------------------------CEEEEEEEEET----TEEEE-EEEE----
T ss_pred -----------------HH--H----H------------------------hcCCCcEEecC----CCceE-EEEe----
Confidence 00 0 0 00111111110 11111 1111
Q ss_pred CCccccccccccccccccchh----hhhccccccccccCCC-CCCCcc-eecccHHHHH-hhccCCC-------------
Q 000993 1023 KYPATLVEGTLLAVGGRYDYL----LHRMWDREYVGYASRT-NPPSGV-GASLALETII-QHYPVDF------------- 1082 (1196)
Q Consensus 1023 ~~~~~~~~~~~I~~GGRYD~L----~~~fg~~~~~~~~g~~-~~~pAv-Gfaiglerl~-~~L~~~~------------- 1082 (1196)
..++=||-. .++|+ ..+.+.+ ..+|.| +.++|++|++ .+|.++.
T Consensus 262 ------------~~~td~~l~~~~~~s~~~----l~y~d~~~~~~P~vi~~s~Gv~R~i~aile~~~~~~~~~~~~g~d~ 325 (454)
T 1g5h_A 262 ------------WNLGDQELLHTYPGNVST----IQGRDGRKNVVPCVLSVSGDVDLGTLAYLYDSFQLAENSFARKKSL 325 (454)
T ss_dssp ------------EEEESHHHHHHSTTCGGG----SCEEETTEEECCEEEEEEEEHHHHHHHHHHHHEEC-----------
T ss_pred ------------cCCCHHHHHhccCCceee----EEEECCCCcEeeEEEeCcccHHHHHHHHHHHhcchhhcccccCCcc
Confidence 111111100 01111 1111112 235766 8899999996 5554211
Q ss_pred -----CCCCCCCCceEEEE-EcC-CCchHHHHHHHHHHHHHcCCeEE--EeeCCCCCHHHHHHHHHHCCCcEEEEEcCCc
Q 000993 1083 -----KPVRNEAGTSVLVC-SRG-GGGLLVERMELVAELWEENIKAQ--FVPVPDPSLTEQYEYASEHDIKCLVILTDTG 1153 (1196)
Q Consensus 1083 -----~~~~~~~~~~vlv~-~~~-~~~~~~~a~~~a~~Lr~~Gi~ve--l~~~~~~~l~k~~~~A~~~g~~~~iiig~~E 1153 (1196)
..+...+|.+|+|+ +.+ ++....+|.+++++||++|++|+ ++...+.++++++++|++.|+||+|+||++|
T Consensus 326 ~r~~l~~P~~lAP~qV~Ii~~~~~~e~~~~~A~~l~~~Lr~~Gi~v~~~~Ddr~~~sigkk~r~Ad~~GiP~~IiVG~~E 405 (454)
T 1g5h_A 326 QRKVLKLHPCLAPIKVALDVGKGPTVELRQVCQGLLNELLENGISVWPGYSETVHSSLEQLHSKYDEMSVLFSVLVTETT 405 (454)
T ss_dssp -CCEECCCTTTCSCCEEEEECSSCHHHHHHHHHHHHHHHHHTTCCEEEGGGSCCCSCHHHHHHHHHHTTCSEEEEECHHH
T ss_pred cceeEecCcccCCCeEEEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEEecCCCCCCHHHHHHHHHHcCCCEEEEECcch
Confidence 12223567899998 552 13567889999999999999996 4432256899999999999999999999999
Q ss_pred ccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 000993 1154 AQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1186 (1196)
Q Consensus 1154 ~~~g~v~vk~l~~g~q~~v~~~el~~~l~~~l~ 1186 (1196)
+++|+|+||++++++|..++++++++.|++.++
T Consensus 406 le~g~VtvR~r~t~eq~~v~l~el~~~l~~~l~ 438 (454)
T 1g5h_A 406 LENGLIQLRSRDTTMKEMMHISKLRDFLVKYLA 438 (454)
T ss_dssp HHHCEEEEEETTTCCEEEEETTSHHHHHHHHHH
T ss_pred hhCCEEEEEECCCCcEEEEEHHHHHHHHHHHHh
Confidence 999999999999999999999999999987765
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=2.6e-18 Score=190.85 Aligned_cols=137 Identities=21% Similarity=0.246 Sum_probs=107.2
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcE--EEEEEEecCCCCc----------------------hhHHHHHHHHHHHHhcC
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRH--YAVKKIRLKDKSL----------------------PVNDRILREVATLSRLQ 438 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~--vAVK~i~~~~~~~----------------------~~~~~~~~Ev~iL~~L~ 438 (1196)
|++.+.||+|+||.||+|.+..+|+. ||||+++...... .....+.+|+..|+.+.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 67889999999999999999778999 9999976432110 11236789999999999
Q ss_pred CCCe--eeeeeeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC--C----CHHHHH
Q 000993 439 HQHV--VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP--R----TLRQVF 510 (1196)
Q Consensus 439 HpnI--V~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~--g----sL~~~l 510 (1196)
|++| +.++.. ...++|||||+ | +|.++.
T Consensus 129 ~~~i~~p~~~~~--------------------------------------------~~~~lVmE~~g~~g~~~~~L~~~~ 164 (258)
T 1zth_A 129 EAGVSVPQPYTY--------------------------------------------MKNVLLMEFIGEDELPAPTLVELG 164 (258)
T ss_dssp HTTCCCCCEEEE--------------------------------------------ETTEEEEECCEETTEECCBHHHHG
T ss_pred hCCCCCCeEEEc--------------------------------------------CCCEEEEEecCCCCCccccHHHHh
Confidence 8865 222211 12389999995 3 677665
Q ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHH-hCCCcccCCCcCcEEecCCCCeEEeccCcchh
Q 000993 511 ESYDHFDKELAWHLFRQIVEGLAHIH-GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 568 (1196)
Q Consensus 511 ~~~~~l~e~~~~~i~~qIa~gL~yLH-s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~ 568 (1196)
.. .++..+..++.||+.||.||| ++||+||||||+|||++. .++|+|||+|..
T Consensus 165 ~~---~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~--~~~liDFG~a~~ 218 (258)
T 1zth_A 165 RE---LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID--KVYFIDMGQAVT 218 (258)
T ss_dssp GG---GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS--SEEECCCTTCEE
T ss_pred hc---cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC--cEEEEECccccc
Confidence 33 234567889999999999999 999999999999999998 999999999974
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.56 E-value=1.2e-15 Score=177.38 Aligned_cols=144 Identities=17% Similarity=0.206 Sum_probs=95.9
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC------------chhHHHHHHHHHHHHhcCCCCeeeeeeeee
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS------------LPVNDRILREVATLSRLQHQHVVRYYQAWF 450 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~------------~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~ 450 (1196)
|++.+.||.|+||.||+|.+. +|+.||||+++....+ .........++++.....|+|+++++...+
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 899999999999999999986 7999999998642111 001112222333333334445444432211
Q ss_pred ecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHH
Q 000993 451 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIV 529 (1196)
Q Consensus 451 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa 529 (1196)
... .. ......+|||||++| .|.++. ..+.+..++.||+
T Consensus 176 ~vp-----------------~p-----------------~~~~~~~LVME~i~G~~L~~l~------~~~~~~~l~~qll 215 (397)
T 4gyi_A 176 PVP-----------------EP-----------------IAQSRHTIVMSLVDALPMRQVS------SVPDPASLYADLI 215 (397)
T ss_dssp SCC-----------------CE-----------------EEEETTEEEEECCSCEEGGGCC------CCSCHHHHHHHHH
T ss_pred CCC-----------------ee-----------------eeccCceEEEEecCCccHhhhc------ccHHHHHHHHHHH
Confidence 000 00 000112799999987 665432 1234567889999
Q ss_pred HHHHHHHhCCCcccCCCcCcEEecCCCC----------eEEeccCcch
Q 000993 530 EGLAHIHGQGIIHRDLTPNNIFFDARND----------IKIGDFGLAK 567 (1196)
Q Consensus 530 ~gL~yLHs~gIiHrDLKp~NILld~~~~----------vKL~DFGlA~ 567 (1196)
.+|.|||++|||||||||.|||++.++. +.|+||+-+-
T Consensus 216 ~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V 263 (397)
T 4gyi_A 216 ALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMV 263 (397)
T ss_dssp HHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCE
T ss_pred HHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcc
Confidence 9999999999999999999999988763 8899999775
|
| >2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.51 E-value=2.2e-14 Score=169.32 Aligned_cols=143 Identities=13% Similarity=0.146 Sum_probs=120.5
Q ss_pred CCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----ee--cCCCcccccceEEEeecCCceEeecCCCcHHHH
Q 000993 741 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI 814 (1196)
Q Consensus 741 ~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia 814 (1196)
..|+.+++|..+.+++.|++.+++.+.++||++|.||.| .+ .++.+...++||++. ++.++|||+.|+|++
T Consensus 161 g~G~~~~~p~ga~l~~~L~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sG~~~~f~~emy~~~---~~~l~LrPt~e~~i~ 237 (425)
T 2dq3_A 161 GSRFTVIAGWGARLERALINFMLDLHTKKGYKEICPPHLVKPEILIGTGQLPKFEEDLYKCE---RDNLYLIPTAEVPLT 237 (425)
T ss_dssp CSSCCEEETHHHHHHHHHHHHHHHHHHHTTCEEEECCSEECHHHHHHHSCTTTTGGGSCBCT---TTCCEECSSTHHHHH
T ss_pred CCCceEECcHHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHHHhcCCCCcChhhheEec---CCeEEEcCCCcHHHH
Confidence 589999999999999999999999999999999999999 22 233456788999885 478999999999999
Q ss_pred HHHHhC----CCCceeEEEecCeeecCCCCC--------CCcceeEeEEEEeCCCCc--cchHHHHHHHHHHHHHcCCCC
Q 000993 815 RWAISN----QKSSFKRYEISSVYRRAIGHS--------PPNRYLQGDFDIIGGASA--LTEAEVLKVTMDIVTRFFHAE 880 (1196)
Q Consensus 815 R~~a~~----~~~P~r~~Y~G~VfR~e~~~~--------~~~ef~Q~GvEiiG~~~~--~aDaEvI~la~~~L~~lgi~~ 880 (1196)
++++.. ...|+|+||+|+|||+|.++. |.++|+|+++++||.++. ..+.|++.++.++|+.||+.
T Consensus 238 ~~~~~~i~s~~~LPlrl~~~g~~FR~E~~~~Gr~~~Gl~R~reF~q~E~~~f~~pe~s~~~~~e~i~~~~~il~~LGL~- 316 (425)
T 2dq3_A 238 NLYREEILKEENLPIYLTAYTPCYRREAGAYGKDIRGIIRQHQFDKVELVKIVHPDTSYDELEKLVKDAEEVLQLLGLP- 316 (425)
T ss_dssp GGGTTEEEETTTCCEEEEEEEEEECCCCSCCSSSCSSSSSCSEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHHTCC-
T ss_pred HHHHhhccccccCCeEEEEecCEecCCCCcccccccCcccccceEEeeEEEECCHHHHHHHHHHHHHHHHHHHHHCCCc-
Confidence 998763 356999999999999988542 445699999999998764 23479999999999999996
Q ss_pred ceE-EEeCc
Q 000993 881 SCD-IHLNH 888 (1196)
Q Consensus 881 ~~~-i~Lg~ 888 (1196)
|+ +.+..
T Consensus 317 -~rvv~l~~ 324 (425)
T 2dq3_A 317 -YRVVELCT 324 (425)
T ss_dssp -EEEEECCT
T ss_pred -eEEEEecC
Confidence 66 55544
|
| >2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.45 E-value=9e-14 Score=137.49 Aligned_cols=87 Identities=32% Similarity=0.420 Sum_probs=80.5
Q ss_pred CcceEeecCCCCCCCCccceeEEEEEeCCCCCCCCCceeeccCCCCCHHHHHHHHHHHHHHHHHhhhCCCeEEEeeHHHH
Q 000993 16 GRAQSKDHSSSTVDDNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAA 95 (1196)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~Gm~miftl~~~~ 95 (1196)
+++|+|.+.++.+++++.+.+.|.|+||++||+++|.+.|...++|++.++..|.+.|.+++++|+ ||+|||+||+.+
T Consensus 37 ~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~~~~l~~~~~~~L~~~L~~~~~e~~--G~~mif~lv~~l 114 (128)
T 2ebm_A 37 PPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFSQENLEDNDVSDILKLLALQAEENL--GMVMIFTLVTAV 114 (128)
T ss_dssp SCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEEESSCCHHHHHHHHHHHHHHHHHHT--TSCCHHHHHHHH
T ss_pred CCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhC--CCEEHHHHHHHH
Confidence 578999998876665567899999999999999999999999889999999999999999999999 999999999999
Q ss_pred HHHHHhhCC
Q 000993 96 QEFLSEIVP 104 (1196)
Q Consensus 96 ~e~l~~~~~ 104 (1196)
||+|++++.
T Consensus 115 qe~l~e~~~ 123 (128)
T 2ebm_A 115 QEKLNEIVD 123 (128)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998764
|
| >2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.3e-13 Score=138.09 Aligned_cols=90 Identities=20% Similarity=0.246 Sum_probs=80.5
Q ss_pred CCCCcC-CcceEeecCCCCCCCCccceeEEEEEeCCCCCCCCCceeeccCCCCCHHHHHHHHHHHHHHHHHhhhCCCeEE
Q 000993 10 SGRRSK-GRAQSKDHSSSTVDDNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMI 88 (1196)
Q Consensus 10 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~Gm~mi 88 (1196)
+||..+ +++|+|.+.+..+ ++..+.+.|.|+||++||+++|.+.|...+||++.++..|.+.|.+++++|+ ||+||
T Consensus 38 ~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~--G~~mi 114 (138)
T 2yz0_A 38 SSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKNVQNVMDSQLQMLKSEFKKIHNTSR--GQEII 114 (138)
T ss_dssp SSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEECCCSCCSHHHHHHHHHHHHHHHHST--TSCCH
T ss_pred ccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHhC--CCEEH
Confidence 466633 4799999987654 2346899999999999999999999999999999999999999999999999 99999
Q ss_pred EeeHHHHHHHHHhh
Q 000993 89 FNLVEAAQEFLSEI 102 (1196)
Q Consensus 89 ftl~~~~~e~l~~~ 102 (1196)
|+||+.+||||+++
T Consensus 115 f~lv~~lqe~l~~~ 128 (138)
T 2yz0_A 115 FEITSFTQEKLDEF 128 (138)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999998
|
| >1nnh_A Asparaginyl-tRNA synthetase-related peptide; structural genomics, PSI, protein structure initiative, southeast COLL for structural genomics; 1.65A {Pyrococcus furiosus} SCOP: d.104.1.1 PDB: 3p8t_A 3p8v_A 3p8y_A 3reu_A* 3rex_A* 3rl6_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=9.1e-13 Score=148.42 Aligned_cols=120 Identities=13% Similarity=0.114 Sum_probs=89.8
Q ss_pred chhhhHhhHHHHHHHHHHHHHcCCccccccceeec-----C--CCcccccceEEEeecCCceEeecCCCcHHHHHHHHhC
Q 000993 748 SDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLL-----G--DCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISN 820 (1196)
Q Consensus 748 ~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~-----~--~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~ 820 (1196)
.....+++..+.+.++++|.++||.+|+||++... . .++. .++|.+. ..|+.+.||..-.....+.++
T Consensus 11 ~~~~~~~rs~i~~~ir~~f~~~GF~EVeTP~l~~~~~~~~~~~~~e~--a~~f~~~-~~~~~~~L~~Spe~~~~~l~~-- 85 (294)
T 1nnh_A 11 ISPTLDIQTKILEYMTDFFVKEGFKWLLPVIISPITDPLWPDPAGEG--MEPAEVE-IYGVKMRLTHSMILHKQLAIA-- 85 (294)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCEEECCCCEESCCCCCCSCTTCCC--CCCCEEE-ETTEEEEECSCSHHHHHHHHH--
T ss_pred hHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEccchhccCCCCCc--ceeEEEE-cCCCCEEeccChHHHHHHHhh--
Confidence 34568899999999999999999999999999443 1 2222 5677653 346678887433333334443
Q ss_pred CCCceeEEEecCeeecCCCCC---CCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHcC
Q 000993 821 QKSSFKRYEISSVYRRAIGHS---PPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFF 877 (1196)
Q Consensus 821 ~~~P~r~~Y~G~VfR~e~~~~---~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lg 877 (1196)
..+.|+||+|+|||+|.||. +.+ ||+|+++|++|.+ +.|++.++.+.++.+.
T Consensus 86 -~g~~rvf~ig~~FR~E~pq~~~~RH~~EFtqle~e~~~~~----~~~l~~~~e~l~~~l~ 141 (294)
T 1nnh_A 86 -MGLKKIFVLSPNIRLESRQKDDGRHAYEFTQLDFEVERAK----MEDIMRLIERLVYGLF 141 (294)
T ss_dssp -TTCCEEEEEEEEECCCCGGGCSSSCCSEEEEEEEEEETCC----HHHHHHHHHHHHHHHH
T ss_pred -cCccceEEEEccEeCCCCCCCCCccccceeEEEEEecCCC----HHHHHHHHHHHHHHHH
Confidence 24789999999999999663 334 7999999999974 7899999999988763
|
| >2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A | Back alignment and structure |
|---|
Probab=99.40 E-value=2.5e-13 Score=134.33 Aligned_cols=86 Identities=21% Similarity=0.367 Sum_probs=76.3
Q ss_pred CCcceEeecCCCCCCC--CccceeEEEEEeCCCCCCCCCceeeccCCCCCHHHHHHHHHHHHHHHHHhhhCCCeEEEeeH
Q 000993 15 KGRAQSKDHSSSTVDD--NELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLV 92 (1196)
Q Consensus 15 ~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~Gm~miftl~ 92 (1196)
.+++|+|.+.+..+++ ...+.+.|.|+||++||+++|.+.+...++|++.++..|.+.|.+++++|+ ||+|||+||
T Consensus 38 ~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~~~L~~~~~~~L~~~L~~~~~e~~--G~~mif~lv 115 (128)
T 2day_A 38 SPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNPRGLSDEQIHTILQVLGHVAKAGL--GTAMLYELI 115 (128)
T ss_dssp CCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEEESSCHHHHHHHHHHHHHHHHHTT--TSCCHHHHH
T ss_pred CCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcCCCCCHHHHHHHHHHHHHHHHHhC--CCEEhHHHH
Confidence 3568888887654432 236899999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHhh
Q 000993 93 EAAQEFLSEI 102 (1196)
Q Consensus 93 ~~~~e~l~~~ 102 (1196)
+.+||||.+.
T Consensus 116 ~~lqe~l~~~ 125 (128)
T 2day_A 116 EKGKEILSGP 125 (128)
T ss_dssp HHHHHHHCCC
T ss_pred HHHHHHHHhc
Confidence 9999999753
|
| >1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A | Back alignment and structure |
|---|
Probab=99.39 E-value=5.9e-13 Score=156.80 Aligned_cols=142 Identities=8% Similarity=0.099 Sum_probs=118.0
Q ss_pred CCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----ee--cCCCcccccceEEEeecCCceEeecCCCcHHHH
Q 000993 741 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI 814 (1196)
Q Consensus 741 ~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia 814 (1196)
..|+.+|.|..+.+++.|++.+++.+.++||++|.||.| ++ .++.+.+.++||++.| +.++|||..|++++
T Consensus 155 g~G~~~~~p~ga~l~~aL~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sG~~~~f~~emy~~~d---~~l~L~Pt~e~~~~ 231 (421)
T 1ses_A 155 GSRSYALKGDLALYELALLRFAMDFMARRGFLPMTLPSYAREKAFLGTGHFPAYRDQVWAIAE---TDLYLTGTAEVVLN 231 (421)
T ss_dssp CSSCCCEETHHHHHHHHHHHHHHHHHHHTTCEEEECCSEEEHHHHHHHTCTTTTGGGSCBBTT---SSEEECSSTHHHHH
T ss_pred CCCeEEECcHHHHHHHHHHHHHHHHHHHcCCEEEeCCceecHHHHHhcCCCCcCchhcEEEcC---CeEEEeecCcHHHH
Confidence 479999999999999999999999999999999999999 22 2345567899999865 78999999999999
Q ss_pred HHHHhC----CCCceeEEEecCeeecC-----CCCCC---CcceeEeEEEEeCCCC-ccchH---HHHHHHHHHHHHcCC
Q 000993 815 RWAISN----QKSSFKRYEISSVYRRA-----IGHSP---PNRYLQGDFDIIGGAS-ALTEA---EVLKVTMDIVTRFFH 878 (1196)
Q Consensus 815 R~~a~~----~~~P~r~~Y~G~VfR~e-----~~~~~---~~ef~Q~GvEiiG~~~-~~aDa---EvI~la~~~L~~lgi 878 (1196)
+++... ...|+|+|++|+|||+| +++.| .++|+|+++..|+.++ ..++. |++.++.++|+.||+
T Consensus 232 ~~~~~~~~s~~~LPlr~~~~g~~FR~E~g~~Gr~~~GL~R~rqF~q~E~~~f~~p~~e~s~~~~~e~~~~~~~il~~LGL 311 (421)
T 1ses_A 232 ALHSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLEL 311 (421)
T ss_dssp HTTTTCEEEGGGCSEEEEEEEEEECCCCSCCCSCCCTTSSCSEEEEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHhcccccCchhCCEEEEecCCeecCCccccCcCCCCCeeeeeeeeeeEEEEeCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 988763 24699999999999998 55544 4569999999888762 23443 999999999999999
Q ss_pred CCceE-EEeC
Q 000993 879 AESCD-IHLN 887 (1196)
Q Consensus 879 ~~~~~-i~Lg 887 (1196)
. +. +.+.
T Consensus 312 ~--~rvv~l~ 319 (421)
T 1ses_A 312 P--YRLVEVA 319 (421)
T ss_dssp C--EEEEECC
T ss_pred c--eEEEEec
Confidence 5 66 4444
|
| >2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A | Back alignment and structure |
|---|
Probab=99.39 E-value=5.8e-13 Score=158.01 Aligned_cols=144 Identities=8% Similarity=0.034 Sum_probs=119.5
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecC--CCcccccceEEEeecCCceEeecCCCcHHH
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG--DCPQFKRNTVKLLTHGGDLLELSHELRLPF 813 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~--~~~~~~~~my~f~D~~G~~laLRPD~T~~i 813 (1196)
...|+.+++|..+.+++.|++.+++.+.++||++|.||.| ++.+ +.+.+.++||++.| +.++|||..|+++
T Consensus 181 ~g~G~~~~~p~ga~l~~aL~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sG~~~~f~~emy~~~d---~~l~LrPt~e~~~ 257 (455)
T 2dq0_A 181 SGSRFYYLLNEIVILDLALIRFALDRLIEKGFTPVIPPYMVRRFVEEGSTSFEDFEDVIYKVED---EDLYLIPTAEHPL 257 (455)
T ss_dssp TCTTCCEEEHHHHHHHHHHHHHHHHHHHHTTCEEEECCSEECHHHHHTTSCTTHHHHTCCBBTT---SSCEECSSTHHHH
T ss_pred cCCCeEEECCHHHHHHHHHHHHHHHHHHHcCCEEEeCCcccCHHHHHhcCCCCCChHhhCeecC---CcEEEcCcCcHHH
Confidence 3579999999999999999999999999999999999999 3333 34556889999864 6899999999999
Q ss_pred HHHHHhC----CCCceeEEEecCeeecCCCCC--------CCcceeEeEEEEeCCCCcc--chHHHHHHHHHHHHHcCCC
Q 000993 814 IRWAISN----QKSSFKRYEISSVYRRAIGHS--------PPNRYLQGDFDIIGGASAL--TEAEVLKVTMDIVTRFFHA 879 (1196)
Q Consensus 814 aR~~a~~----~~~P~r~~Y~G~VfR~e~~~~--------~~~ef~Q~GvEiiG~~~~~--aDaEvI~la~~~L~~lgi~ 879 (1196)
++++... ...|+|+|++|+|||+|.++. |.++|+|+.+.+|+.+... .-.|++.++.++|+.||+.
T Consensus 258 ~~~~~~~~~s~~~LPlr~~~~g~~FR~E~~~~G~~~~GL~R~rqF~kvE~~~f~~pe~s~~~~~e~l~~~~~il~~LGL~ 337 (455)
T 2dq0_A 258 AGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHEKIIRNAEELFQELEIP 337 (455)
T ss_dssp HHTTTTEEEETTTCSEEEEEEEEEECCCTTCSSCSCCSSSSCSEEEEEEEEEEECTTTHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHhCccCchhCCEEEEEecCcccCCCCccccccCCceeeeeeEeeeEEEecCHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 9988763 356999999999999998754 4456999999988877421 1129999999999999995
Q ss_pred CceEEEeCc
Q 000993 880 ESCDIHLNH 888 (1196)
Q Consensus 880 ~~~~i~Lg~ 888 (1196)
+.+....
T Consensus 338 --yrv~~~~ 344 (455)
T 2dq0_A 338 --YRVVNIC 344 (455)
T ss_dssp --EEEEECC
T ss_pred --eEEEECC
Confidence 7766654
|
| >1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3 | Back alignment and structure |
|---|
Probab=99.37 E-value=4.9e-13 Score=133.78 Aligned_cols=89 Identities=26% Similarity=0.404 Sum_probs=78.9
Q ss_pred CCcceEeecCCCCCC-CCccceeEEEEEeCCCCCCCCCceeeccCCCCCHHHHHHHHHHHHHHHHHhhhCCCeEEEeeHH
Q 000993 15 KGRAQSKDHSSSTVD-DNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVE 93 (1196)
Q Consensus 15 ~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~Gm~miftl~~ 93 (1196)
.+++|+|.+.+++++ .+..+.+.|.|+||++||+++|.+.|...++|++.++..|.+.|.+++++|+ ||+|||+||+
T Consensus 43 ~~~~~~i~l~~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~--G~~mif~lv~ 120 (137)
T 1ukx_A 43 EPPEINLVLYPQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKNAKGLSNESVNLLKSHLEELAKKQC--GEVMIFELAH 120 (137)
T ss_dssp CCCCEEEEECCTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEEEESSSSSHHHHHHHHHHHHHHHHT--TSCCHHHHHH
T ss_pred CCcEEEEEEecCCcCCcccceEEEEEEECCCCCCCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHhC--CCEEhHHHHH
Confidence 357999999875433 2236899999999999999999999988899999999999999999999999 9999999999
Q ss_pred HHHHHHHhhCCC
Q 000993 94 AAQEFLSEIVPL 105 (1196)
Q Consensus 94 ~~~e~l~~~~~~ 105 (1196)
.+||||+++..+
T Consensus 121 ~lqe~l~~~~~p 132 (137)
T 1ukx_A 121 HVQSFLSEHNKS 132 (137)
T ss_dssp HHHHHHHHHCCC
T ss_pred HHHHHHHhcCCC
Confidence 999999987643
|
| >3dsq_A Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-tRNA synthetase, ligase; 2.10A {Desulfitobacterium hafniense} PDB: 2znj_A 2zni_A | Back alignment and structure |
|---|
Probab=99.34 E-value=1.6e-12 Score=145.82 Aligned_cols=130 Identities=8% Similarity=-0.032 Sum_probs=102.0
Q ss_pred hHHHHHHHHHHHHHcCCcccccccee----ecCCCcccccceEEEeecCCceEeecCCCcHHHHHHHHhC---CCCceeE
Q 000993 755 RDYVVQVTKEMFRQHCAKHLEIEPMY----LLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISN---QKSSFKR 827 (1196)
Q Consensus 755 ~~~I~~~i~~~f~~~Gy~~I~tP~~~----~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~---~~~P~r~ 827 (1196)
.+.+++.++++|..+||++|.||.|+ +...+....++||++.++.++.++|||.+++..++++..+ +..|+|+
T Consensus 73 ~~~l~~~ir~~~~~~Gf~EV~tP~Le~~~l~~~~g~~~~~~m~~~~npl~e~~~LRp~l~p~l~~~~r~~~~~~~~Plrl 152 (288)
T 3dsq_A 73 LLELEEKLAKALHQQGFVQVVTPTIITKSALAKMTIGEDHPLFSQVFWLDGKKCLRPMLAPNLYTLWRELERLWDKPIRI 152 (288)
T ss_dssp HHHHHHHHHHHHHTTTCEECCCCSEEEHHHHHTTSSCC--CCTTTSCEEETTEEECSCSHHHHHHHHHHHTTTSCSCEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEECCeeecHHHHhhcCCCcccccEEeecccccchhhhhcChHHHHHHHHHHHhCCCCCEEE
Confidence 46899999999999999999999992 2222221122577666555577899999888877655442 4569999
Q ss_pred EEecCeeecCCCCC-CCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEE
Q 000993 828 YEISSVYRRAIGHS-PPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIH 885 (1196)
Q Consensus 828 ~Y~G~VfR~e~~~~-~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~ 885 (1196)
|++|+|||+|.++. +.+||+|++++++|..+...++|++.++.++|+.||+++ +.+.
T Consensus 153 feiG~vFR~E~~~~~r~~EF~qle~~i~g~~~~~~f~elkg~le~ll~~LGl~~-~~~~ 210 (288)
T 3dsq_A 153 FEIGTCYRKESQGAQHLNEFTMLNLTELGTPLEERHQRLEDMARWVLEAAGIRE-FELV 210 (288)
T ss_dssp EEEEEEECSCCSSSCCCSEEEEEEEEEETCCGGGHHHHHHHHHHHHHHHHTCCC-CEEE
T ss_pred EEEeeEEecCCCCCCcCccEEEEEEEEEcCCchhhHHHHHHHHHHHHHHcCCCC-cEEe
Confidence 99999999987764 445799999999999888889999999999999999964 5553
|
| >2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.32 E-value=9.5e-13 Score=130.12 Aligned_cols=86 Identities=21% Similarity=0.191 Sum_probs=77.0
Q ss_pred CcceEeecCCCCCCCCccceeEEEEEeCCCCCCCCCceeeccCCCCCHHHHHHHHHHHHHHHHHhhhCCCeEEEeeHHHH
Q 000993 16 GRAQSKDHSSSTVDDNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAA 95 (1196)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~Gm~miftl~~~~ 95 (1196)
+++|+|.+..+..+ +..+.+.|+|+||++||+++|.+.|. .++|++.++..|.+.|.+++++|+ ||+|||+||+.+
T Consensus 39 ~~~f~i~l~~~~~~-~~~~~~~L~~~~p~~YP~~~P~i~l~-~~~L~~~~~~~l~~~L~~~~~e~~--G~~mif~lv~~l 114 (128)
T 2ebk_A 39 GTVFRIHTKAEGFM-DADIPLELVFHLPVNYPSCLPGISIN-SEQLTRAQCVTVKEKLLEQAESLL--SEPMVHELVLWI 114 (128)
T ss_dssp CEEEEEEEECCTTT-TCCCEEEEEEEECSSTTSSCCCCCCC-CSSSCHHHHHHHHHHHHHHHHHTT--TSCHHHHHHHHH
T ss_pred CCeEEEEecCCCCC-CCCeEEEEEEECCCCCCCCCCeEEEE-hhhCCHHHHHHHHHHHHHHHHHhC--CcchHHHHHHHH
Confidence 46899998876532 23589999999999999999999998 589999999999999999999999 999999999999
Q ss_pred HHHHHhhCCC
Q 000993 96 QEFLSEIVPL 105 (1196)
Q Consensus 96 ~e~l~~~~~~ 105 (1196)
||+|++++..
T Consensus 115 qe~l~~~~~~ 124 (128)
T 2ebk_A 115 QQNLRHILSQ 124 (128)
T ss_dssp TTSHHHHHCC
T ss_pred HHHHHHHHhC
Confidence 9999998753
|
| >2cja_A Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE ATP; 2.2A {Methanosarcina barkeri} PDB: 2cim_A* 2cj9_A* 2cjb_A | Back alignment and structure |
|---|
Probab=99.29 E-value=2e-12 Score=154.81 Aligned_cols=147 Identities=7% Similarity=0.051 Sum_probs=119.2
Q ss_pred ccccccccCCCCcccccchhhhHhhHHHHHHHHH-HHHHcCCccccccce----ee--cCCCcccccceEEEe-----e-
Q 000993 731 HAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKE-MFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLL-----T- 797 (1196)
Q Consensus 731 ~~~~l~~~~~~~G~~D~~p~ea~~~~~I~~~i~~-~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~-----D- 797 (1196)
..+.+.- -...|+.+|.|..+.+++.|++.+++ ++.++||++|.||+| ++ .++.+.+.++||++. |
T Consensus 211 raG~i~~-~~~~G~y~~~P~G~~L~~~L~~~~~~e~~~~~G~~EV~tP~L~~~el~~~SGh~~~F~demy~v~~~~~Rd~ 289 (522)
T 2cja_A 211 KEGWLKR-GSSRGQWIHGPQSARIFRTFEKIVLEELLEPLGYREMIFPKLVTWEVWMKSGHAKGVYPEIYYVCPPQTRDP 289 (522)
T ss_dssp HTTSEEE-CSSTTCEEECHHHHHHHHHHHHHHHHHTHHHHTCEECBCCSEEEHHHHHHHTGGGTCGGGCCEEECBSCCCH
T ss_pred HCCCeee-eCCCCeEEECchHHHHHHHHHHHHHHHHHHHcCCEEEECCCcccHHHHhhcCCcCccccceeeeecCCccch
Confidence 3444432 26799999999999999999999996 589999999999999 22 344666789999995 3
Q ss_pred ------------------------cCCceEeecCCCcHHHHHHHHhC----CCCceeEEE-ecCeeecCCCC-----CCC
Q 000993 798 ------------------------HGGDLLELSHELRLPFIRWAISN----QKSSFKRYE-ISSVYRRAIGH-----SPP 843 (1196)
Q Consensus 798 ------------------------~~G~~laLRPD~T~~iaR~~a~~----~~~P~r~~Y-~G~VfR~e~~~-----~~~ 843 (1196)
.+++.++|||+.+.++++++... ...|+|+|+ +|++||+| ++ .|.
T Consensus 290 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~LrPt~e~~i~~~f~~~i~s~~~LPlrl~q~ig~~FR~E-pgs~~GL~R~ 368 (522)
T 2cja_A 290 DYWEEVADYYKVTHEVPTKLIKEKIAEPIGGMCYAQCPPFWMYVAGETLPNEEIPVKVFDRSGTSHRYE-SGGIHGIERV 368 (522)
T ss_dssp HHHHHHHHHHHHHSSCCHHHHHHHBCCCCEEECSSSSGGGGGGTTTCEECGGGCSEEEEECSSEEECCC-SSSCCCTTSC
T ss_pred hhhhhhhhhhhccccccccccccccCCCcEEEccCCcHHHHHHHHhcccccccCCeeEEEEcCceEeCC-CCCCCCCeEe
Confidence 14789999999999999988752 246999999 99999999 66 455
Q ss_pred cceeEeEEEEeCCCCccch--HHHH-HHHHHHHHHcCCC
Q 000993 844 NRYLQGDFDIIGGASALTE--AEVL-KVTMDIVTRFFHA 879 (1196)
Q Consensus 844 ~ef~Q~GvEiiG~~~~~aD--aEvI-~la~~~L~~lgi~ 879 (1196)
+||+|.++++||.++...+ .+++ ..+..+++.||+.
T Consensus 369 REF~q~E~~~F~~pe~s~ee~ee~i~~~~~~~l~~LGLp 407 (522)
T 2cja_A 369 DEFHRIEIVWIGTKEEVLKCAEELHDRYMHIFNDILDIE 407 (522)
T ss_dssp SEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred EEEEEeeEEEEeChHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 6799999999997655332 4678 8889999999996
|
| >3vbb_A Seryl-tRNA synthetase, cytoplasmic; coiled-coil, ligase; 2.89A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.3e-10 Score=138.14 Aligned_cols=144 Identities=10% Similarity=0.071 Sum_probs=115.0
Q ss_pred CCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----ee--cCCCcccccceEEEeec--------CCceEeec
Q 000993 741 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTH--------GGDLLELS 806 (1196)
Q Consensus 741 ~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~--------~G~~laLR 806 (1196)
..|+..|.|..+.+.+.+++.+++.+.++||++|.||.| ++ .++.+.+.++||++.|. .++.++|+
T Consensus 190 Gsgfy~l~p~GarL~raL~~f~~d~~~~~Gy~EV~~P~lv~~el~~~sG~l~~f~eemy~v~~~g~~~~~~~~~~~l~L~ 269 (522)
T 3vbb_A 190 GSRGYFLKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDDNSYDEKYLI 269 (522)
T ss_dssp STTCCEEETHHHHHHHHHHHHHHHHHHHTTCEEEECCSEEEHHHHHHHSCCC-CCSCCCEEC------------CCEEEC
T ss_pred CcceEEEcCHHHHHHHHHHHHHHHHHHHcCCEEEECCcccchHHHhhcCCcccCcccceEeecCCccccccccCcceeEc
Confidence 468899999999999999999999999999999999999 22 34467788999999876 36789999
Q ss_pred CCCcHHHHHHHHh----CCCCceeEEEecCeeecCCCCC--------CCcceeEeEEEEeCCCCc-cch---HHHHHHHH
Q 000993 807 HELRLPFIRWAIS----NQKSSFKRYEISSVYRRAIGHS--------PPNRYLQGDFDIIGGASA-LTE---AEVLKVTM 870 (1196)
Q Consensus 807 PD~T~~iaR~~a~----~~~~P~r~~Y~G~VfR~e~~~~--------~~~ef~Q~GvEiiG~~~~-~aD---aEvI~la~ 870 (1196)
|...+|++.++.. +..+|+|+|++|+|||+|.++. |.++|+|+++.+|+.+.. .++ .+++.++.
T Consensus 270 PTaE~~l~~l~~~ei~s~~dLPlr~~~~s~cFR~Eags~GrdtrGL~RvhQF~kvE~~~f~~pe~e~s~~e~e~ml~~~e 349 (522)
T 3vbb_A 270 ATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAE 349 (522)
T ss_dssp SSTHHHHHTTSTTCEECTTTCCEEEEEEEEEECSCCCC----CCCSSSCSEEEEEEEEEEECSSTTHHHHHHHHHHHHHH
T ss_pred ccCcHHHHHHHhhhecccccCCeeEEEecccccCCCCcCCccCCCcceeeeeEEEEEEEEeCCChHHHHHHHHHHHHHHH
Confidence 9888999887654 2356999999999999987531 344699999999998764 233 48899999
Q ss_pred HHHHHcCCCCceEEEe
Q 000993 871 DIVTRFFHAESCDIHL 886 (1196)
Q Consensus 871 ~~L~~lgi~~~~~i~L 886 (1196)
++|+.||+. |++..
T Consensus 350 ~il~~LGLp--yrvv~ 363 (522)
T 3vbb_A 350 EFYQSLGIP--YHIVN 363 (522)
T ss_dssp HHHHHTTCC--EEEEE
T ss_pred HHHHHcCCc--eEEEE
Confidence 999999995 66543
|
| >3qtc_A Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP B O-methyl tyrosine binding, magnesium binding, aminoacylatio esterification; HET: 0A1 ANP; 1.75A {Methanosarcina mazei} PDB: 2q7e_A* 2q7g_A* 2q7h_A* 2zim_A* 2zin_A* 2e3c_A* 2zcd_A* 2zce_A* 2zio_A* 3vqv_A* 3vqw_A* 3vqx_A* 3vqy_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=3.4e-10 Score=127.51 Aligned_cols=123 Identities=11% Similarity=0.126 Sum_probs=98.6
Q ss_pred hHHHHHHHHHHHHHcCCccccccceeecC--------CCcccccceEEEeecCCceEeecCCCcHHHHHHHHhC---CCC
Q 000993 755 RDYVVQVTKEMFRQHCAKHLEIEPMYLLG--------DCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISN---QKS 823 (1196)
Q Consensus 755 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~--------~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~---~~~ 823 (1196)
+..+.+.+++.|..+||.+|.||+|+... ......+.||.| ++..+|||++++++.+.++.+ ...
T Consensus 79 ~~~i~~~ir~~l~~~Gf~EV~Tp~l~~~~~~~~~~~~~~~p~~~~~~~~----~~~~~LR~slsp~L~~~l~~n~~~~~~ 154 (290)
T 3qtc_A 79 LGKLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDNDTELSKQIFRV----DKNFCLRPMLTPNLYNYLRKLDRALPD 154 (290)
T ss_dssp HHHHHHHHHHHHHHTTCEEECCCSEEETHHHHHTTCCTTSSGGGGCCEE----TTTEEECSCSHHHHHHHHHHHTTTSCS
T ss_pred HHHHHHHHHHHHHHCCCEEEECCceeeHHHHHhcCCCcCCchhhhheee----CCCeeEcccChHHHHHHHHHhhccCCC
Confidence 46899999999999999999999992211 122234567766 367999999999999988874 356
Q ss_pred ceeEEEecCeeecCCCCC-CCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEE
Q 000993 824 SFKRYEISSVYRRAIGHS-PPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIH 885 (1196)
Q Consensus 824 P~r~~Y~G~VfR~e~~~~-~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~ 885 (1196)
|.|+|++|+|||+|..+. +..||+|++++++|... .+.|+..++.++|+.+|++ +.+.
T Consensus 155 p~rlfeiG~vFR~E~~~~~~~~Ef~ql~~~~~g~~~--~f~elkg~le~ll~~lGl~--~~~~ 213 (290)
T 3qtc_A 155 PIKIFEIGPCYRKESDGKEHLEEFTMLVFWQMGSGC--TRENLESIITDFLNHLGID--FKIV 213 (290)
T ss_dssp SEEEEEEEEEECCCSCSSSCCSEEEEEEEEEESTTC--CHHHHHHHHHHHHHHHTCC--CEEE
T ss_pred CeEEEEEcCEEecCCCCCcCcchheEEEEEEEcCCh--HHHHHHHHHHHHHHHcCCC--cEEe
Confidence 999999999999986654 44579999999999763 5789999999999999983 6553
|
| >1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1 | Back alignment and structure |
|---|
Probab=99.08 E-value=4.1e-10 Score=109.52 Aligned_cols=102 Identities=7% Similarity=0.018 Sum_probs=92.8
Q ss_pred CCCCceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEEeeC-CCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcC
Q 000993 1087 NEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPV-PDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLD 1165 (1196)
Q Consensus 1087 ~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel~~~-~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~ 1165 (1196)
...|.++.|++++ +....+|.+++++|++.|++|+++.. ++.+|++.++.|...++||+++||++|.++++|+|+.+.
T Consensus 5 ~~~P~Qv~IlpVs-~~~~~YA~~V~~~L~~~GiRvevD~~r~~e~Lg~kIR~a~~~kvPy~lVVG~kE~e~~sVsVR~r~ 83 (130)
T 1v95_A 5 SSGPVDCSVIVVN-KQTKDYAESVGRKVRDLGMVVDLIFLNTEVSLSQALEDVSRGGSPFAIVITQQHQIHRSCTVNIMF 83 (130)
T ss_dssp CCCCCTEEEEESS-SGGGHHHHHHHHHHHTTTCCEEEEECTTSSCHHHHHHHHHHHTCSEEEEECHHHHHHTEEEEEECS
T ss_pred CCCCCeEEEEEeC-cchHHHHHHHHHHHHHCCCEEEEecCCCCCcHHHHHHHHHHcCCCEEEEEechHHhcCeeEEEecC
Confidence 3467899999996 78899999999999999999999884 257999999999999999999999999999999999999
Q ss_pred C--CcccccchHHHHHHHHHHHHhhc
Q 000993 1166 V--KKEKEVQRESLVRFLLDAIASQF 1189 (1196)
Q Consensus 1166 ~--g~q~~v~~~el~~~l~~~l~~~~ 1189 (1196)
. +++..+++++++..|.+.++.++
T Consensus 84 ~~~~e~~~m~lde~i~~l~~~~~~~~ 109 (130)
T 1v95_A 84 GTPQEHRNMPQADAMVLVARNYERYK 109 (130)
T ss_dssp SSCCEEEEEEHHHHHHHHHHHHHHHH
T ss_pred CCCCccCccCHHHHHHHHHHHHHHHh
Confidence 8 88899999999999988877664
|
| >1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.04 E-value=4.7e-10 Score=133.95 Aligned_cols=142 Identities=13% Similarity=0.111 Sum_probs=116.3
Q ss_pred CCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec--CCCccccc-ceEEEeecCCceEeecCCCcHHH
Q 000993 741 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKR-NTVKLLTHGGDLLELSHELRLPF 813 (1196)
Q Consensus 741 ~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~-~my~f~D~~G~~laLRPD~T~~i 813 (1196)
..|+..|.|..+.+.+.|++.+++.+.++||++|.||.| ++. +..+.+.+ +||++.|.+++.++|||.-++++
T Consensus 208 G~g~~~l~p~GarL~~aL~~~~~d~~~~~Gy~eV~~P~lv~~~l~~~sG~~~~f~e~emf~v~~~~~~~l~L~PTaE~~~ 287 (501)
T 1wle_A 208 GHRSYYLRGAGALLQHGLVNFTLNKLIHRGFTPMTVPDLLRGVVFEGCGMTPNAKPSQIYNIDPSRFEDLNLAGTAEVGL 287 (501)
T ss_dssp CTTCCEEETHHHHHHHHHHHHHHHHHHHTTCEEEECCSEECHHHHHHHTCCSSSSSCSSCBBCTTTSSSCEECSSHHHHH
T ss_pred cCceEEEcChHHHHHHHHHHHHHHHHHHcCCEEEeCCccccHHHHHhhcCCCccCccccEEEecCCCCeEEECCcCcHHH
Confidence 478888899999999999999999999999999999999 222 33444556 99999887788999999888899
Q ss_pred HHHHHh----CCCCceeEEEecCeeecCCC----CC---CCcceeEeEEEEeCCCC-cc---chHHHHHHHHHHHHHcCC
Q 000993 814 IRWAIS----NQKSSFKRYEISSVYRRAIG----HS---PPNRYLQGDFDIIGGAS-AL---TEAEVLKVTMDIVTRFFH 878 (1196)
Q Consensus 814 aR~~a~----~~~~P~r~~Y~G~VfR~e~~----~~---~~~ef~Q~GvEiiG~~~-~~---aDaEvI~la~~~L~~lgi 878 (1196)
+.++.. +..+|+|+|++|++||+|.. .. |.++|+|+++.+|+.+. .. .-.+++.++.++|+.||+
T Consensus 288 ~~l~~~~i~s~~~LPlrl~~~s~~FR~Ea~~G~d~~GL~RvhqF~kvE~~~f~~pe~e~s~~~~e~~l~~~~~il~~LgL 367 (501)
T 1wle_A 288 AGYFMDHSVAFRDLPIRMVCSSTCYRAETDTGKEPWGLYRVHHFTKVEMFGVTGPGLEQSSELLEEFLSLQMEILTELGL 367 (501)
T ss_dssp HHHHTTEEEEGGGCSEEEEEEEEEECCCCSCC--CCSSSSCSEEEEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHhhccCCcccCCeeEEeccCcccCCCCCCCCCcCceeeeeeeeeeEEEEeCCcHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 988865 23569999999999999865 22 33469999999999874 22 234889999999999999
Q ss_pred CCceEE
Q 000993 879 AESCDI 884 (1196)
Q Consensus 879 ~~~~~i 884 (1196)
. |.+
T Consensus 368 p--yrv 371 (501)
T 1wle_A 368 H--FRV 371 (501)
T ss_dssp C--EEE
T ss_pred c--EEE
Confidence 5 665
|
| >2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3 | Back alignment and structure |
|---|
Probab=99.03 E-value=2.4e-10 Score=116.28 Aligned_cols=87 Identities=20% Similarity=0.186 Sum_probs=72.5
Q ss_pred ceEeecCCCCCCCCccceeEEEEEeCCCCCCCCCceeeccCCCCCHHHHHHHHHHHHHHHH-HhhhCCCeEEEeeHHHHH
Q 000993 18 AQSKDHSSSTVDDNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQAN-SNAREGRVMIFNLVEAAQ 96 (1196)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~-enl~~Gm~miftl~~~~~ 96 (1196)
+|+|.++.+..+ +..+.+.|+|+||++||+++|.+.|.... ++..+...|.+.|.+.++ +|+ ||+|||++|+.+|
T Consensus 58 ~f~I~l~~~~~~-~~~~~l~L~v~lP~~YP~~~P~i~l~~~~-l~~~~~~~L~~~L~~~~~~~~~--G~~mif~lv~~lq 133 (152)
T 2dax_A 58 YFTINMNLDVSD-EKMAMFSLACILPFKYPAVLPEITVRSVL-LSRSQQTQLNTDLTAFLQKHCH--GDVCILNATEWVR 133 (152)
T ss_dssp EEEEEEEEECST-TCEEEEEEEEEECSSTTSSCCCCEEECTT-SCHHHHHHHHHHHHHHHHHSSC--SSCCSHHHHHHHH
T ss_pred EEEEEEecCCCC-ccCceEEEEEECCCCCCCCCCeEEEEccc-CCHHHHHHHHHHHHHHHHHhcC--CcchHHHHHHHHH
Confidence 777877654332 34688999999999999999999999865 677778888887888775 699 9999999999999
Q ss_pred HHHHhhCCCCcc
Q 000993 97 EFLSEIVPLGQS 108 (1196)
Q Consensus 97 e~l~~~~~~~~~ 108 (1196)
|++.+++.....
T Consensus 134 e~l~~~~~~~~~ 145 (152)
T 2dax_A 134 EHASGYVSRDTS 145 (152)
T ss_dssp HHHHHHCCCCCC
T ss_pred HHHHHHHhcccc
Confidence 999999876644
|
| >3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=7.3e-10 Score=131.04 Aligned_cols=143 Identities=10% Similarity=0.100 Sum_probs=116.1
Q ss_pred CCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----ee--cCCCcccccceEEEeecCCceEeecCCCcHHHH
Q 000993 741 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI 814 (1196)
Q Consensus 741 ~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia 814 (1196)
..|+..|.|..+.+.+.+++.+++...++||++|.||.| +. .++.+.+.++||++.+. ++.++|+|...+|++
T Consensus 197 Gsgf~~~~p~GarL~~aL~~f~~d~~~~~Gy~eV~~P~lv~~~l~~~sG~~~~f~e~mf~v~~~-~~~~~L~PTaE~~l~ 275 (484)
T 3lss_A 197 GGRSYVLKGGLVQLQVALVSYSLDFLVKRGYTPFYPPFFLNRDVMGEVAQLSQFDEELYQVSGD-GDKKYLIATSEMPIA 275 (484)
T ss_dssp CTTCCEEEHHHHHHHHHHHHHHHHHHHTTTCEEEECCSEEEHHHHHHHSCHHHHHHTCCEEESS-SSCEEECSSTHHHHH
T ss_pred CceEEEECCHHHHHHHHHHHHHHHHHHHcCCEEEecCccccHHHHHhcCCcccccccceEeecC-CcceEEeccCcHHHH
Confidence 456788899999999999999999999999999999999 22 34456678899999775 788999998888998
Q ss_pred HHHHh----CCCCceeEEEecCeeecCCCC-C-------CCcceeEeEEEEeCCCCc--cch--HHHHHHHHHHHHHcCC
Q 000993 815 RWAIS----NQKSSFKRYEISSVYRRAIGH-S-------PPNRYLQGDFDIIGGASA--LTE--AEVLKVTMDIVTRFFH 878 (1196)
Q Consensus 815 R~~a~----~~~~P~r~~Y~G~VfR~e~~~-~-------~~~ef~Q~GvEiiG~~~~--~aD--aEvI~la~~~L~~lgi 878 (1196)
-++.. +..+|+|+|.+|++||+|... + |.++|+|.++.+|+.+.. ..+ .+++.++.++|+.||+
T Consensus 276 ~l~~~~i~sy~dLPlr~~~~s~cFR~Eags~Grdt~GL~RvrqF~kvE~~~f~~pe~~~s~~e~e~~~~~~e~il~~LGL 355 (484)
T 3lss_A 276 AYHRGRWFTELKEPLKYAGMSTCFRKEAGAHGRDTLGIFRVHQFDKIEQFVVCSPRQEESWRHLEDMITTSEEFNKSLGL 355 (484)
T ss_dssp HHTTTCEESCCSSCEEEEEEEEEECCCTTCSSSCCSTTSSCSEEEEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHhccccchhhCCeeEEeecCccCCCCCcCCcccCCcceeeeEEEEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHcCC
Confidence 77654 245699999999999998732 2 444699999999998765 333 3789999999999999
Q ss_pred CCceEEEe
Q 000993 879 AESCDIHL 886 (1196)
Q Consensus 879 ~~~~~i~L 886 (1196)
. |++..
T Consensus 356 p--yrvv~ 361 (484)
T 3lss_A 356 P--YRVVN 361 (484)
T ss_dssp C--EEEEE
T ss_pred c--EEEEE
Confidence 5 66543
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=1.4e-09 Score=120.02 Aligned_cols=141 Identities=14% Similarity=0.122 Sum_probs=106.6
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCccc
Q 000993 378 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 378 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~ 456 (1196)
..+..|++...++.|+.+.||++... +..+++|+....... ....+.+|+.+|+.+. |.++.++++++..
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~--~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~----- 81 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKG--TTYDVEREKDMMLWLEGKLPVPKVLHFERH----- 81 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTT--STTCHHHHHHHHHHHTTTSCCCCEEEEEEE-----
T ss_pred HHhccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCC--CHHHHHHHHHHHHHHhcCCCCCeEEEEEec-----
Confidence 34578999999999999999998754 789999998642111 1235888999999984 6677778766521
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
....|+||||++| +|.+.+. +......++.+++.+|+.|
T Consensus 82 -----------------------------------~~~~~lv~e~i~G~~l~~~~~-----~~~~~~~~~~~l~~~l~~L 121 (263)
T 3tm0_A 82 -----------------------------------DGWSNLLMSEADGVLCSEEYE-----DEQSPEKIIELYAECIRLF 121 (263)
T ss_dssp -----------------------------------TTEEEEEEECCSSEEHHHHCC-----TTTCHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCceEEEEEecCCeehhhccC-----CcccHHHHHHHHHHHHHHH
Confidence 3457999999988 7766531 1223347788999999999
Q ss_pred Hh-----------------------------------------------------------CCCcccCCCcCcEEecCCC
Q 000993 536 HG-----------------------------------------------------------QGIIHRDLTPNNIFFDARN 556 (1196)
Q Consensus 536 Hs-----------------------------------------------------------~gIiHrDLKp~NILld~~~ 556 (1196)
|+ ..++|+|++|.|||++.+.
T Consensus 122 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~ 201 (263)
T 3tm0_A 122 HSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGK 201 (263)
T ss_dssp HHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTE
T ss_pred hCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCc
Confidence 98 3489999999999998765
Q ss_pred CeEEeccCcch
Q 000993 557 DIKIGDFGLAK 567 (1196)
Q Consensus 557 ~vKL~DFGlA~ 567 (1196)
.+.|+||+.+.
T Consensus 202 ~~~lIDwe~a~ 212 (263)
T 3tm0_A 202 VSGFIDLGRSG 212 (263)
T ss_dssp EEEECCCTTCE
T ss_pred EEEEEEchhcc
Confidence 56799999875
|
| >3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A | Back alignment and structure |
|---|
Probab=98.95 E-value=1.8e-09 Score=127.62 Aligned_cols=143 Identities=10% Similarity=0.086 Sum_probs=116.1
Q ss_pred CCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----ee--cCCCcccccceEEEeecCCceEeecCCCcHHHH
Q 000993 741 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI 814 (1196)
Q Consensus 741 ~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia 814 (1196)
..|+..|.|..+.+.+.+++.+++...++||++|.||.| +. .++.+.+.++||++.|. ++.++|+|-+.+|++
T Consensus 174 Gsg~~~l~p~GarL~~aL~~~~~d~~~~~Gy~eV~~P~lv~~~l~~~sG~l~~f~eemf~v~~~-~~~~~LipTaE~pl~ 252 (485)
T 3qne_A 174 GHRGYFLRNYGVFLNQALINYGLSFLSSKGYVPLQAPVMMNKEVMAKTAQLSQFDEELYKVIDG-EDEKYLIATSEQPIS 252 (485)
T ss_dssp CTTCCEECTHHHHHHHHHHHHHHHHHHTTTCEEEECCSEEEHHHHHHHSCHHHHTTTCCEEEET-TEEEEECSSTHHHHH
T ss_pred cceeEEEecHHHHHHHHHHHHHHHHHHHcCCEEEeCCccccHHHHhhcCCccccccceEEEeCC-CCeEEEeccccHHHH
Confidence 458889999999999999999999999999999999999 22 23456678899999875 678999999999999
Q ss_pred HHHHhC------CCCceeEEEecCeeecCCCC--------CCCcceeEeEEEEeCCCCccch--HHHHHHHHHHHHHcCC
Q 000993 815 RWAISN------QKSSFKRYEISSVYRRAIGH--------SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFH 878 (1196)
Q Consensus 815 R~~a~~------~~~P~r~~Y~G~VfR~e~~~--------~~~~ef~Q~GvEiiG~~~~~aD--aEvI~la~~~L~~lgi 878 (1196)
.++... ..+|+|++.+++|||+|... -|.++|+|.++.+|+.+....+ .+++.++.++|+.||+
T Consensus 253 ~l~~~ei~~S~y~dLPlr~~~~s~cfR~Eag~~Grdt~GL~RvhqF~kvE~~~f~~pe~s~~e~e~ml~~~e~il~~LgL 332 (485)
T 3qne_A 253 AYHAGEWFESPAEQLPVRYAGYSSCFRREAGSHGKDAWGIFRVHAFEKIEQFVLTEPEKSWEEFDRMIGCSEEFYQSLGL 332 (485)
T ss_dssp HHTTTCEESSHHHHCCEEEEEEEEEECSCCC-----CCSSSSCSEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHhccccccchhcCCeeEEEecccccCCCCCCCccCCCceeeeeeeeeeEEEEeCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 887652 23599999999999998743 2444699999999987654222 4889999999999999
Q ss_pred CCceEEEe
Q 000993 879 AESCDIHL 886 (1196)
Q Consensus 879 ~~~~~i~L 886 (1196)
. |.+..
T Consensus 333 p--yrvv~ 338 (485)
T 3qne_A 333 P--YRVVG 338 (485)
T ss_dssp C--EEEEE
T ss_pred c--EEEEE
Confidence 5 66543
|
| >3err_A Fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA...; coiled coil, ligase; HET: AMP; 2.27A {Mus musculus} PDB: 3j1t_A 3j1u_A | Back alignment and structure |
|---|
Probab=98.88 E-value=5.2e-09 Score=126.21 Aligned_cols=141 Identities=9% Similarity=0.085 Sum_probs=114.4
Q ss_pred CCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce------eecCCCcccccceEEEeecCCceEeecCCCcHHHH
Q 000993 741 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI 814 (1196)
Q Consensus 741 ~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia 814 (1196)
..|+..|.|..+.+.+.+++.+++.+.++||++|.||.+ .-.++.+.+.++||++.| +.++|+|.-.++++
T Consensus 264 G~g~~~~~p~Ga~l~~aL~~~~~~~~~~~Gy~ev~~P~lv~~~l~~~sG~~~~f~e~mf~~~~---~~~~L~PT~E~~~~ 340 (536)
T 3err_A 264 GSRSYALKGDLALYELALLRFAMDFMARRGFLPMTLPSYAREKAFLGTGHFPAYRDQVWAIAE---TDLYLTGTAEVVLN 340 (536)
T ss_dssp CSSCCCEEHHHHHHHHHHHHHHHHHHHHTTCEEEECCSEEEHHHHHHHTCTTTTGGGCCEETT---TTEEECSSTHHHHH
T ss_pred CCceeEEcCHHHHHHHHHHHHHHHHHHHcCCEEEeccccccHHHHHhcCCcccChhhceEecC---CCEEEccCCcHHHH
Confidence 468889999999999999999999999999999999999 223456677899999875 68999998778888
Q ss_pred HHHHh----CCCCceeEEEecCeeecCCCC--------CCCcceeEeEEEEeCCCC--ccch--HHHHHHHHHHHHHcCC
Q 000993 815 RWAIS----NQKSSFKRYEISSVYRRAIGH--------SPPNRYLQGDFDIIGGAS--ALTE--AEVLKVTMDIVTRFFH 878 (1196)
Q Consensus 815 R~~a~----~~~~P~r~~Y~G~VfR~e~~~--------~~~~ef~Q~GvEiiG~~~--~~aD--aEvI~la~~~L~~lgi 878 (1196)
-++.. ++..|+|++.+|++||+|... -|.++|+|.+..+|+.++ ...+ .+++.++.++|+.||+
T Consensus 341 ~l~~~~i~s~~~LPlr~~~~~~~fR~E~gs~Gr~~~GL~RvrqF~k~e~~~f~~pe~e~s~~~~e~~~~~~~~i~~~LgL 420 (536)
T 3err_A 341 ALHSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLEL 420 (536)
T ss_dssp HHTTTCEEEGGGCSEEEEEEEEEECCCTTCTTSSCSTTSSCSEEEEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHhcccccHhhCCeeEEEecccccCCccccCCCCCCceeeeeeEEEEEEEEECCchHHHHHHHHHHHHHHHHHHHHcCC
Confidence 76654 234699999999999998732 144469999999999887 3222 3788899999999999
Q ss_pred CCceEEEe
Q 000993 879 AESCDIHL 886 (1196)
Q Consensus 879 ~~~~~i~L 886 (1196)
. |++..
T Consensus 421 p--yrvv~ 426 (536)
T 3err_A 421 P--YRLVE 426 (536)
T ss_dssp C--EEEEE
T ss_pred c--EEEEE
Confidence 5 66543
|
| >2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3 | Back alignment and structure |
|---|
Probab=98.88 E-value=1.2e-09 Score=111.06 Aligned_cols=84 Identities=11% Similarity=0.009 Sum_probs=71.7
Q ss_pred ceEeecCCCCCCCCccceeEEEEEeCCCCCCCCCceeeccCCCCCHHHHHHHHHHHHHHHHHh-hhCCCeEEEeeHHHHH
Q 000993 18 AQSKDHSSSTVDDNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSN-AREGRVMIFNLVEAAQ 96 (1196)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~en-l~~Gm~miftl~~~~~ 96 (1196)
.|+|.++.++. ...+.|+|+||++||+++|.+.|... +++..+...|.+.|.+.+++| + ||+|||++|+.+|
T Consensus 63 ~~~i~l~~~~~----~~~i~L~v~lP~~YP~~~P~i~l~~~-~l~~~~~~~L~~~L~~~l~~~~l--G~~mif~lve~lq 135 (154)
T 2daw_A 63 EFVITLQIEEP----KVKIDLQVTMPHSYPYLALQLFGRSS-ELDRHQQLLLNKGLTSYIGTFDP--GELCVCAAIQWLQ 135 (154)
T ss_dssp EEEEEEEETTT----TEEEEEEEEECSSTTSSCCEEEEECS-SSCHHHHHHHHHHHHHHHTTSCT--TSCSHHHHHHHHH
T ss_pred EEEEEEecCCC----CceEEEEEEcCCCCCCCCCcEEEEeC-CCCHHHHHHHHHHHHHHHHHhcC--CCcHHHHHHHHHH
Confidence 56655544321 24899999999999999999999986 899999999999999999887 8 9999999999999
Q ss_pred HHHHhhCCCCcc
Q 000993 97 EFLSEIVPLGQS 108 (1196)
Q Consensus 97 e~l~~~~~~~~~ 108 (1196)
|++++++....+
T Consensus 136 e~~~~~l~~~~~ 147 (154)
T 2daw_A 136 DNSASYFLNRKL 147 (154)
T ss_dssp HTTHHHHCCCCC
T ss_pred HHHHHHHhCcCC
Confidence 999999887655
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=98.83 E-value=8.1e-09 Score=112.97 Aligned_cols=135 Identities=16% Similarity=0.064 Sum_probs=94.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCC--eeeeeeeeeecCccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH--VVRYYQAWFETGVAD 456 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~Hpn--IV~l~~~~~e~~~~~ 456 (1196)
++.++.+....+.|..+.||++.. .+|..+++|+.... ....+.+|+.+++.+.+.+ +.+++++...
T Consensus 18 ~~~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~-----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~----- 86 (264)
T 1nd4_A 18 RLFGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG-----ALNELQDEAARLSWLATTGVPCAAVLDVVTE----- 86 (264)
T ss_dssp TTTTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC-----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEEC-----
T ss_pred hcCCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc-----cchhhhHHHHHHHHHHhCCCCCCeEEEeccC-----
Confidence 445666655445666799999865 46788999987532 1235778999999885544 4446654311
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
....|+||||++| +|. .. ..+ ...++.+++..|+.|
T Consensus 87 -----------------------------------~~~~~~v~e~i~G~~l~--~~---~~~---~~~~~~~l~~~l~~l 123 (264)
T 1nd4_A 87 -----------------------------------AGRDWLLLGEVPGQDLL--SS---HLA---PAEKVSIMADAMRRL 123 (264)
T ss_dssp -----------------------------------SSCEEEEEECCSSEETT--TS---CCC---HHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCCCEEEEEecCCcccC--cC---cCC---HhHHHHHHHHHHHHH
Confidence 2346899999987 553 21 122 225677888888888
Q ss_pred HhCC----------------------------------------------------------CcccCCCcCcEEecCCCC
Q 000993 536 HGQG----------------------------------------------------------IIHRDLTPNNIFFDARND 557 (1196)
Q Consensus 536 Hs~g----------------------------------------------------------IiHrDLKp~NILld~~~~ 557 (1196)
|+.. ++|+|++|.|||++.++.
T Consensus 124 h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~ 203 (264)
T 1nd4_A 124 HTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRF 203 (264)
T ss_dssp TTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEE
T ss_pred hCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcE
Confidence 8753 999999999999987766
Q ss_pred eEEeccCcch
Q 000993 558 IKIGDFGLAK 567 (1196)
Q Consensus 558 vKL~DFGlA~ 567 (1196)
+.|+|||.+.
T Consensus 204 ~~liD~~~a~ 213 (264)
T 1nd4_A 204 SGFIDCGRLG 213 (264)
T ss_dssp EEECCCTTCE
T ss_pred EEEEcchhcc
Confidence 7799999875
|
| >1x54_A Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics, ligase; HET: 4AD; 1.45A {Pyrococcus horikoshii} PDB: 1x55_A* 1x56_A | Back alignment and structure |
|---|
Probab=98.71 E-value=3.5e-08 Score=116.65 Aligned_cols=114 Identities=11% Similarity=0.050 Sum_probs=91.5
Q ss_pred hhhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEeecCCceEeec--CCCcHHHHHHHHhCCCCceeE
Q 000993 750 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELS--HELRLPFIRWAISNQKSSFKR 827 (1196)
Q Consensus 750 ~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLR--PD~T~~iaR~~a~~~~~P~r~ 827 (1196)
.....+..+.+.++++|.++||.+|+||++..... +-..+||.+ +..|+.+.|| |+++... ++. .+.|+
T Consensus 133 ~~~~~rs~i~~~ir~~f~~~gF~eVeTP~l~~~~~--e~~~~~f~~-~~~~~~~~Lr~Spel~~~~--~~~----g~~rv 203 (434)
T 1x54_A 133 AIMKVKETLIMAAREWLLKDGWHEVFPPILVTGAV--EGGATLFKL-KYFDKYAYLSQSAQLYLEA--AIF----GLEKV 203 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESCCS--SCGGGCCEE-EETTEEEEECSCSHHHHHH--HHH----HHSEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEeCcEEEeecC--CCCceeEEE-eecCCcEEeccChHHHHHH--Hhc----Cccce
Confidence 34778889999999999999999999999853322 224578877 5678999999 8777543 222 37899
Q ss_pred EEecCeeecCCCCCC-Cc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHc
Q 000993 828 YEISSVYRRAIGHSP-PN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 876 (1196)
Q Consensus 828 ~Y~G~VfR~e~~~~~-~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l 876 (1196)
|++|+|||+|.++.+ .. ||+|+++|+.|.+ +.|++.++.+.++.+
T Consensus 204 f~ig~~FR~E~~~~~RH~pEFtqle~e~~~~~----~~dlm~~~e~ll~~l 250 (434)
T 1x54_A 204 WSLTPSFRAEKSRTRRHLTEFWHLELEAAWMD----LWDIMKVEEELVSYM 250 (434)
T ss_dssp EEEEEEECCCCCCCSSCCSEEEEEEEEEETCC----HHHHHHHHHHHHHHH
T ss_pred EEEecceecCCCCCcccccEEEEeeEEEcCCC----HHHHHHHHHHHHHHH
Confidence 999999999988764 44 8999999999974 789999998888775
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.70 E-value=2.8e-08 Score=115.00 Aligned_cols=142 Identities=17% Similarity=0.273 Sum_probs=100.5
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEe--cCCCCchhHHHHHHHHHHHHhcC--CCCeeeeeeeeeecCccccCCC
Q 000993 385 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR--LKDKSLPVNDRILREVATLSRLQ--HQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 385 ~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~--~~~~~~~~~~~~~~Ev~iL~~L~--HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.++.|+.|.++.||++... +..+++|+.. .... ......+.+|+.+++.+. +..+++++..+.+..
T Consensus 42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~-~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~------- 111 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKL-LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDES------- 111 (359)
T ss_dssp EEEECCC-CCSCEEEEECS--SCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTT-------
T ss_pred eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCC-CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCC-------
Confidence 3678999999999998764 5688899765 2211 122346888999999996 455777776652210
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh--
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-- 537 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs-- 537 (1196)
.....|+||||++| .+.+. ....++..+...++.+++..|+.||+
T Consensus 112 ------------------------------~~g~~~~vme~v~G~~l~~~--~~~~l~~~~~~~~~~~l~~~La~LH~~~ 159 (359)
T 3dxp_A 112 ------------------------------VIGRAFYIMEFVSGRVLWDQ--SLPGMSPAERTAIYDEMNRVIAAMHTVD 159 (359)
T ss_dssp ------------------------------TTSSCEEEEECCCCBCCCCT--TCTTCCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred ------------------------------ccCCeEEEEEecCCeecCCC--ccccCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 01235899999987 44321 12346788888999999999999997
Q ss_pred --------------------------------------------------------CCCcccCCCcCcEEecCCCC--eE
Q 000993 538 --------------------------------------------------------QGIIHRDLTPNNIFFDARND--IK 559 (1196)
Q Consensus 538 --------------------------------------------------------~gIiHrDLKp~NILld~~~~--vK 559 (1196)
..++|+|++|.|||++.++. +.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~ 239 (359)
T 3dxp_A 160 YQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLA 239 (359)
T ss_dssp TTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEE
T ss_pred chhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEE
Confidence 35899999999999997753 68
Q ss_pred EeccCcchh
Q 000993 560 IGDFGLAKF 568 (1196)
Q Consensus 560 L~DFGlA~~ 568 (1196)
|.||+.+..
T Consensus 240 viDwe~a~~ 248 (359)
T 3dxp_A 240 VLDWELSTL 248 (359)
T ss_dssp ECCCTTCEE
T ss_pred EECcccccc
Confidence 999999864
|
| >1wyd_A Hypothetical aspartyl-tRNA synthetase; archaea, LIGA; HET: EPE; 2.30A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.66 E-value=6.5e-08 Score=114.10 Aligned_cols=114 Identities=9% Similarity=0.083 Sum_probs=90.4
Q ss_pred hhhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEeecCCceEeec--CCCcHHHHHHHHhCCCCceeE
Q 000993 750 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELS--HELRLPFIRWAISNQKSSFKR 827 (1196)
Q Consensus 750 ~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLR--PD~T~~iaR~~a~~~~~P~r~ 827 (1196)
.-...+..+.+.+++.|..+||.+|+||++..... +-..++|.+ +..|+.+.|| |+++ ..| ++. .+.|+
T Consensus 132 ~~~~~rs~i~~~ir~ff~~~gF~eV~TP~l~~~~~--e~~~~~f~~-~~~~~~~~L~~Spql~--~~~-~~~---g~~rv 202 (429)
T 1wyd_A 132 AVIKIQSLALKAFRETLYKEGFIEIFTPKIIASAT--EGGAQLFPV-IYFGKEAFLAQSPQLY--KEL-MAG---VVERV 202 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESSCS--STTCCCCEE-EETTEEEEECSCCHHH--HHH-HHH---HHSEE
T ss_pred HHHHHHHHHHHHHHHHHhhCCCEEEECCEEEeeCC--CCCceeEEE-ecCCceEEecCCcHHH--HHH-HHh---CcCce
Confidence 34678889999999999999999999999853322 224578877 5678999999 7766 334 333 27799
Q ss_pred EEecCeeecCCCCCC-Cc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHc
Q 000993 828 YEISSVYRRAIGHSP-PN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 876 (1196)
Q Consensus 828 ~Y~G~VfR~e~~~~~-~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l 876 (1196)
|++|+|||+|.++.+ .. ||+|+++|+.|.+ ..|++.++.+.++.+
T Consensus 203 f~ig~~FR~E~~~~~RH~pEFtqle~e~~~~~----~~dlm~~~e~ll~~l 249 (429)
T 1wyd_A 203 FEVAPAWRAEESDTPFHLAEFISMDVEMAFAD----YNDVMQLLEKILHNI 249 (429)
T ss_dssp EEEEEEECCCCCCSSSCCSEEEEEEEEEETCC----HHHHHHHHHHHHHHH
T ss_pred EEEcccccccCCccccccceeeEeeeeecCCC----HHHHHHHHHHHHHHH
Confidence 999999999998764 44 8999999999974 688999888888764
|
| >1n9w_A Aspartyl-tRNA synthetase 2; biosynthetic protein; 2.30A {Thermus thermophilus} SCOP: b.40.4.1 d.104.1.1 PDB: 3kfu_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=3.4e-08 Score=116.21 Aligned_cols=115 Identities=12% Similarity=0.113 Sum_probs=64.8
Q ss_pred hhhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEeecCCceEeec--CCCcHHHHHHHHhCCCCceeE
Q 000993 750 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELS--HELRLPFIRWAISNQKSSFKR 827 (1196)
Q Consensus 750 ~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLR--PD~T~~iaR~~a~~~~~P~r~ 827 (1196)
.-...+..+.+.+++.|.++||.+|+||++..... +-..+||.+ +..|+.+.|| |+++. +.++ .. ..|+
T Consensus 123 ~~~~~rs~i~~~ir~~f~~~gF~EV~TPil~~~~~--e~~~~~f~~-~~~g~~~~L~~Spel~~---~~l~-~g--~~rv 193 (422)
T 1n9w_A 123 APLKVQAALVRGFRRYLDRQDFTEIFTPKVVRAGA--EGGSGLFGV-DYFEKRAYLAQSPQLYK---QIMV-GV--FERV 193 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCC-------------------------------CHHHH---HHHH-HH--HSEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEeCC--CCCceeEEE-eeCCCcEEeeeCHHHHH---HHHh-hC--CCce
Confidence 34678899999999999999999999999853322 223467877 5668889999 88774 3333 22 5699
Q ss_pred EEecCeeecCCCCCC-Cc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHc
Q 000993 828 YEISSVYRRAIGHSP-PN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 876 (1196)
Q Consensus 828 ~Y~G~VfR~e~~~~~-~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l 876 (1196)
|++|+|||+|.++.+ .. ||+|+++|+.|.++ ..|++.++.+.++.+
T Consensus 194 f~ig~~FR~E~~~~~RH~pEFtqle~e~~~~~d---~~dlm~l~e~ll~~l 241 (422)
T 1n9w_A 194 YEVAPVWRMEEHHTSRHLNEYLSLDVEMGFIAD---EEDLMRLEEALLAEM 241 (422)
T ss_dssp EEEEEC-------------CCEEEEEEEESCSS---HHHHHHHHHHHHHHH
T ss_pred eEEeCceECCCCCCCcccceeEEeeeeeeCCCC---HHHHHHHHHHHHHHH
Confidence 999999999998764 44 89999999999744 678999988888764
|
| >3mf2_A BLL0957 protein; aminoacyl-tRNA synthetase, seryl-tRNA synthetase, zinc ION, amino acid:[carrier protein] ligase; HET: AMP; 2.15A {Bradyrhizobium japonicum} PDB: 3mey_A* 3mf1_A* 3pzc_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=2.7e-07 Score=103.77 Aligned_cols=145 Identities=13% Similarity=0.124 Sum_probs=116.2
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eec--CCCcccccceEEEeecC--------------
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHG-------------- 799 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~-------------- 799 (1196)
...|+.-+.+.-+.+.+.+++.+++ ...+||++|.||.+ .+. ++...+.++||....-.
T Consensus 52 g~~g~y~~~g~~a~L~~aLe~~~~~-~~~~Gy~ev~~P~lv~~~~~e~SGhl~~F~e~mf~v~~~~~d~~e~~~ll~~~~ 130 (346)
T 3mf2_A 52 GSDGVYARTALYESIVERLAALITS-HREAGTEALRFPPVMSRAQLEKSGYLKSFPNLLGCVCGLHGTEREINAAVSRFD 130 (346)
T ss_dssp EETTEEEEEHHHHHHHHHHHHHHHH-TCCTTCEEEECCSEEEHHHHHHTTHHHHCGGGCEEEEEECSCHHHHHHHHHHHH
T ss_pred CCCceEEecchHHHHHHHHHHHHHh-hHhcCCeEEECCCccCHHHHHhcCCcccChhhcceeecccccchhhhhhhhhhc
Confidence 3467888889999999999999999 88999999999999 322 33566788999864422
Q ss_pred ----------CceEeecCCCcHHHHHHHHhC---CCCceeEEEecCeeecCCCCC--CCcceeEeEEEEeCCCCccch--
Q 000993 800 ----------GDLLELSHELRLPFIRWAISN---QKSSFKRYEISSVYRRAIGHS--PPNRYLQGDFDIIGGASALTE-- 862 (1196)
Q Consensus 800 ----------G~~laLRPD~T~~iaR~~a~~---~~~P~r~~Y~G~VfR~e~~~~--~~~ef~Q~GvEiiG~~~~~aD-- 862 (1196)
+..++|.|-..+|+.-++... ...|+|+.-.|+|||+|...+ |.++|+|..+.+||.++...+
T Consensus 131 ~~~~~~~~l~~~d~~LiPtacvpl~~~~~~eg~i~~~plr~~~~g~CFR~EaS~GL~RvhqF~kvE~v~~~tpEqs~~e~ 210 (346)
T 3mf2_A 131 AGGDWTTSLSPADLVLSPAACYPVYPIAASRGPLPKGGLRFDVAADCFRREPSKHLDRLQSFRMREYVCIGTPDDVSDFR 210 (346)
T ss_dssp TTSCGGGGEEEEEEEECSSSSTTHHHHHHTTCSCCTTCEEEEEEEEEECCCCCSSTTSCSEEEEEEEEEEESHHHHHHHH
T ss_pred cccccccccCCCCEEEcccccHHHHHHHccCCcccccCeEEEEECCccCCcCCCCCeeeeeeEEEEEEEEeCHHHHHHHH
Confidence 357999999999999988742 245999999999999987433 334599999999998765433
Q ss_pred HHHHHHHHHHHHHcCCCCceEEEeC
Q 000993 863 AEVLKVTMDIVTRFFHAESCDIHLN 887 (1196)
Q Consensus 863 aEvI~la~~~L~~lgi~~~~~i~Lg 887 (1196)
.+++.++.++|+.||+. |++.+.
T Consensus 211 e~l~~~ae~il~~LgLp--yrv~~~ 233 (346)
T 3mf2_A 211 ERWMVRAQAIARDLGLT--FRVDYA 233 (346)
T ss_dssp HHHHHHHHHHHHHTTCC--CEEEEC
T ss_pred HHHHHHHHHHHHHCCCC--EEEEEc
Confidence 38899999999999995 777765
|
| >1eov_A ASPRS, aspartyl-tRNA synthetase; aminoacyl tRNA synthetase, tRNA ligase, APO-enzyme, OB-fold,; 2.30A {Saccharomyces cerevisiae} SCOP: b.40.4.1 d.104.1.1 PDB: 1asy_A* 1asz_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=7.2e-07 Score=106.88 Aligned_cols=115 Identities=10% Similarity=0.074 Sum_probs=86.5
Q ss_pred hhhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEeecCCceEeec--CCCcHHHHHHHHhCCCCceeE
Q 000993 750 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELS--HELRLPFIRWAISNQKSSFKR 827 (1196)
Q Consensus 750 ~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLR--PD~T~~iaR~~a~~~~~P~r~ 827 (1196)
.-.+++..|.+.+++.|..+||.+|+||++.-...++ ..++|.+. ..|+.+.|| |++-. -++++ ..+-|+
T Consensus 176 ~~~~~rs~i~~~ir~~~~~~gF~EV~TPil~~~~~~~--ga~~f~~~-~~~~~~~L~~Spql~~--k~l~~---~g~~rv 247 (487)
T 1eov_A 176 AIFRIQAGVCELFREYLATKKFTEVHTPKLLGAPSEG--GSSVFEVT-YFKGKAYLAQSPQFNK--QQLIV---ADFERV 247 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESSCSSS--SSCCCEEE-ETTEEEEECSCTHHHH--HHHHH---TTCCEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCcEEEeCCEEEEecCCC--Ccccceec-cCCccEEcccChHHHH--HHHHh---cCCCce
Confidence 3467888999999999999999999999985432221 23578764 468999999 87743 23333 246799
Q ss_pred EEecCeeecCCCCCCC-c-ceeEeEEEE-eCCCCccchHHHHHHHHHHHHHc
Q 000993 828 YEISSVYRRAIGHSPP-N-RYLQGDFDI-IGGASALTEAEVLKVTMDIVTRF 876 (1196)
Q Consensus 828 ~Y~G~VfR~e~~~~~~-~-ef~Q~GvEi-iG~~~~~aDaEvI~la~~~L~~l 876 (1196)
||+|+|||+|.++.+| + ||+|+++|+ ||.+. .|++.++.+.++.+
T Consensus 248 y~ig~~FR~E~~~~~Rh~pEFt~le~e~af~~~~----~dlm~l~E~ll~~l 295 (487)
T 1eov_A 248 YEIGPVFRAENSNTHRHMTEFTGLDMEMAFEEHY----HEVLDTLSELFVFI 295 (487)
T ss_dssp EEEEEEECCCCCCCTTCCSEEEEEEEEEECSSCT----HHHHHHHHHHHHHH
T ss_pred EEEeccEecCCCCCCccchhhhhhhhhhhhhcCH----HHHHHHHHHHHHHH
Confidence 9999999999987544 4 899999998 77533 56777777777653
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.24 E-value=6.9e-07 Score=100.84 Aligned_cols=134 Identities=17% Similarity=0.215 Sum_probs=92.7
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCe--eeeeeeeeecCccccCCCCcC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHV--VRYYQAWFETGVADFDGDSMW 463 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnI--V~l~~~~~e~~~~~~~~~~~~ 463 (1196)
+.++.|.+..||++. ..+++|+... ......+.+|+.+|+.+. +..+ .+++......
T Consensus 26 ~~~~~G~~n~v~~v~-----~~~vlR~~~~----~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~----------- 85 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN-----RDFIFKFPKH----SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPS----------- 85 (304)
T ss_dssp CEEEECSSEEEEEST-----TSEEEEEESS----HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCC-----------
T ss_pred EecCCCCcceEEEEC-----CEEEEEecCC----cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCC-----------
Confidence 458999999999763 4688997542 234567889999999884 3332 2332211000
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh-----
Q 000993 464 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG----- 537 (1196)
Q Consensus 464 ~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs----- 537 (1196)
......|+||++++| .+..... ..++.++...++.+++..|+.||+
T Consensus 86 --------------------------~~~~~~~~vm~~i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~la~LH~~~~~~ 137 (304)
T 3sg8_A 86 --------------------------ETYQMSFAGFTKIKGVPLTPLLL--NNLPKQSQNQAAKDLARFLSELHSINISG 137 (304)
T ss_dssp --------------------------SSCSCSCEEEECCCCEECCHHHH--HTSCHHHHHHHHHHHHHHHHHHHHSCCTT
T ss_pred --------------------------CCCCcceEEEcccCCeECCcccc--ccCCHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 001123789999987 5544222 346777778888888888888886
Q ss_pred -----------------------------------------------------CCCcccCCCcCcEEecC--CCCeEEec
Q 000993 538 -----------------------------------------------------QGIIHRDLTPNNIFFDA--RNDIKIGD 562 (1196)
Q Consensus 538 -----------------------------------------------------~gIiHrDLKp~NILld~--~~~vKL~D 562 (1196)
..++|+|++|.||+++. ...+.|+|
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD 217 (304)
T 3sg8_A 138 FKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIID 217 (304)
T ss_dssp SCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECC
T ss_pred CCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEe
Confidence 13699999999999998 45678999
Q ss_pred cCcchh
Q 000993 563 FGLAKF 568 (1196)
Q Consensus 563 FGlA~~ 568 (1196)
|+.+..
T Consensus 218 ~~~~~~ 223 (304)
T 3sg8_A 218 FGDAAI 223 (304)
T ss_dssp CTTCEE
T ss_pred CCCCcc
Confidence 999864
|
| >3a74_A Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, ligase, protein biosynthesis, AMI tRNA synthetase, ATP-binding, magnesium; HET: B4P LYN; 1.80A {Geobacillus stearothermophilus} PDB: 3e9h_A* 3e9i_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=8.1e-06 Score=97.78 Aligned_cols=115 Identities=14% Similarity=0.134 Sum_probs=85.3
Q ss_pred hhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEe-ecCCceEeecCCCcHHHH--HHHHhCCCCceeE
Q 000993 751 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLL-THGGDLLELSHELRLPFI--RWAISNQKSSFKR 827 (1196)
Q Consensus 751 ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~-D~~G~~laLRPD~T~~ia--R~~a~~~~~P~r~ 827 (1196)
..+++..|...+++.|..+||.+|+||++.-...|. ..++|.+. +..|+.+.|| ..+++. |.++ ...-|+
T Consensus 173 ~~r~Rs~i~~~iR~ff~~~gF~EVeTPiL~~~~~Ga--~a~~F~~~~~~~~~~~yLr--~SpqLylk~l~v---~G~~rV 245 (493)
T 3a74_A 173 TFITRSLIIQSMRRYLDSHGYLEVETPMMHAVAGGA--AARPFITHHNALDMTLYMR--IAIELHLKRLIV---GGLEKV 245 (493)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSEESSCCSS--SSCCCEEEETTTTEEEEEC--SCSHHHHHHHHH---TTCCEE
T ss_pred HHHHHHHHHHHHHHHHHhCCeEEEECCeEEecCCCC--cccceEecccCCCceeEEe--cCHHHHHHHHhh---cccCce
Confidence 467888999999999999999999999985332232 34677765 6678999999 233332 3333 245699
Q ss_pred EEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHc
Q 000993 828 YEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 876 (1196)
Q Consensus 828 ~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l 876 (1196)
|++|++||+|..+.++. ||+|+++|..+.+ ..+++.++.+.++.+
T Consensus 246 yeig~~FR~E~~~~rH~pEFT~lE~e~af~d----~~dlm~l~E~ll~~l 291 (493)
T 3a74_A 246 YEIGRVFRNEGISTRHNPEFTMLELYEAYAD----FRDIMKLTENLIAHI 291 (493)
T ss_dssp EEEEEEECCCCCBTTBCSEEEEEEEEEETCC----HHHHHHHHHHHHHHH
T ss_pred EEECccccCCCCCcccCCceeEEEEEecCCC----HHHHHHHHHHHHHHH
Confidence 99999999988776554 7999999999864 556777766666554
|
| >1e1o_A Lysyl-tRNA synthetase, heat inducible; ligase, aminoacyl-tRNA synthetase, protein biosynthesis; HET: LYS; 2.12A {Escherichia coli} SCOP: b.40.4.1 d.104.1.1 PDB: 1e1t_A* 1e22_A* 1e24_A* 1lyl_A 1bbu_A* 1bbw_A 1krs_A 1krt_A | Back alignment and structure |
|---|
Probab=97.89 E-value=5.2e-05 Score=90.94 Aligned_cols=115 Identities=9% Similarity=0.060 Sum_probs=82.1
Q ss_pred hhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEe-ecCCceEeecCCCcHHHH--HHHHhCCCCceeE
Q 000993 751 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLL-THGGDLLELSHELRLPFI--RWAISNQKSSFKR 827 (1196)
Q Consensus 751 ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~-D~~G~~laLRPD~T~~ia--R~~a~~~~~P~r~ 827 (1196)
-.+++..|...+++.|..+||-+|+||++.-...|. ..++|.+. +..|+.+.||- .+++. |.++. ..-|+
T Consensus 182 ~~r~Rs~i~~~iR~f~~~~gFlEVeTPiL~~~~~Ga--~ar~F~t~~~~~~~~~yL~~--SpqLylk~L~v~---G~~rV 254 (504)
T 1e1o_A 182 TFVVRSKILAAIRQFMVARGFMEVETPMMQVIPGGA--SARPFITHHNALDLDMYLRI--APELYLKRLVVG---GFERV 254 (504)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEECCCCSEESSCCSS--CCCCCEEEETTTTEEEEECS--CSHHHHHHHHHH---TCCEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCeEEecCCCC--cccceEeccCCCCceEEecc--CHHHHHHHHhhc---CCCcE
Confidence 367888999999999999999999999985322232 23566554 45688999993 23332 43432 34599
Q ss_pred EEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHc
Q 000993 828 YEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 876 (1196)
Q Consensus 828 ~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l 876 (1196)
|++|++||+|..+.++. ||+|+++|..+.+ ..+++.++-+.++.+
T Consensus 255 yeIg~~FR~E~~~~rH~pEFt~lE~e~af~d----~~dlm~l~E~li~~~ 300 (504)
T 1e1o_A 255 FEINRNFRNEGISVRHNPEFTMMELYMAYAD----YHDLIELTESLFRTL 300 (504)
T ss_dssp EEEEEEECCCCCCC-CCSEEEEEEEEEESCC----HHHHHHHHHHHHHHH
T ss_pred EEEcccccCCCCCccccCceeeeeeeecCCC----HHHHHHHHHHHHHHH
Confidence 99999999988766554 7999999999864 445666666555543
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=0.00011 Score=83.12 Aligned_cols=133 Identities=18% Similarity=0.209 Sum_probs=87.2
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCC---CeeeeeeeeeecCccccCCCCc
Q 000993 386 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ---HVVRYYQAWFETGVADFDGDSM 462 (1196)
Q Consensus 386 ~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~Hp---nIV~l~~~~~e~~~~~~~~~~~ 462 (1196)
++.++.|....||+. |..+++|+-. .......+.+|+.+|+.+.+. .+.+++.+...
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~----~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~----------- 83 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPK----SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKR----------- 83 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEES----SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEEC-----------
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecC----CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeeccc-----------
Confidence 456889999999987 5678889742 223456789999999999653 23344332210
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---
Q 000993 463 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ--- 538 (1196)
Q Consensus 463 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~--- 538 (1196)
.....|++|+|++| .+.... ...++..+...++.+++..|+.||+.
T Consensus 84 ----------------------------~~g~~~~v~e~i~G~~l~~~~--~~~l~~~~~~~~~~~lg~~La~LH~~~~~ 133 (306)
T 3tdw_A 84 ----------------------------SDGNPFVGYRKVQGQILGEDG--MAVLPDDAKDRLALQLAEFMNELSAFPVE 133 (306)
T ss_dssp ----------------------------TTSCEEEEEECCCSEECHHHH--HTTSCHHHHHHHHHHHHHHHHHHHHSCHH
T ss_pred ----------------------------CCCceEEEEeccCCeECchhh--hhhCCHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 12235799999987 554421 11234444455555555555555532
Q ss_pred ---------------------------------------------------------CCcccCCCcCcEEecC---CCC-
Q 000993 539 ---------------------------------------------------------GIIHRDLTPNNIFFDA---RND- 557 (1196)
Q Consensus 539 ---------------------------------------------------------gIiHrDLKp~NILld~---~~~- 557 (1196)
.++|+|++|.|||++. ++.
T Consensus 134 ~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~ 213 (306)
T 3tdw_A 134 TAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPL 213 (306)
T ss_dssp HHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCE
T ss_pred cccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCce
Confidence 3599999999999987 455
Q ss_pred eEEeccCcchh
Q 000993 558 IKIGDFGLAKF 568 (1196)
Q Consensus 558 vKL~DFGlA~~ 568 (1196)
+.|+||+.+..
T Consensus 214 ~~~iD~~~a~~ 224 (306)
T 3tdw_A 214 TGIIDFGDAAI 224 (306)
T ss_dssp EEECCCTTCEE
T ss_pred EEEEehhhcCC
Confidence 48999998864
|
| >1b7y_A Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: d.104.1.1 PDB: 1b70_A* 1eiy_A 1jjc_A* 1pys_A 2iy5_A* 3hfz_A* 3teh_A* 2aly_A* 2akw_A* 2amc_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=0.00011 Score=84.16 Aligned_cols=121 Identities=15% Similarity=0.089 Sum_probs=84.4
Q ss_pred hHHHHHHHHHHHHHcCCccccccceee-----cCC-Ccc-----cccceEEEeecCC-----------ceEeecCCCcHH
Q 000993 755 RDYVVQVTKEMFRQHCAKHLEIEPMYL-----LGD-CPQ-----FKRNTVKLLTHGG-----------DLLELSHELRLP 812 (1196)
Q Consensus 755 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~-----~~~-~~~-----~~~~my~f~D~~G-----------~~laLRPD~T~~ 812 (1196)
...+.+.++++|...||.++.+|.+.- ... ... .....|.+..+.. +..+||+-+++.
T Consensus 103 ~~~~~~~Ir~~f~~~Gf~Ev~~p~v~~~~~nfd~L~~p~~hpar~~~dt~~l~nP~s~~~~~~~~~~~~~~vLRt~tsp~ 182 (350)
T 1b7y_A 103 ITLMERELVEIFRALGYQAVEGPEVESEFFNFDALNIPEHHPARDMWDTFWLTGEGFRLEGPLGEEVEGRLLLRTHTSPM 182 (350)
T ss_dssp HHHHHHHHHHHHHTTTCEECCCCSEEEHHHHTTTTTCCSSSTTTTSSCCCBEECSSCCCBCTTSCBCCSCEEECSSSTHH
T ss_pred HHHHHHHHHHHHHHCCCEEEECcchhcchhHHHhhCCCCCCccccccccEEEcCccccccccccccccccceeeccchHH
Confidence 457888999999999999999998811 111 111 0133455655443 678999999999
Q ss_pred HHHHHHhCCCCceeEEEecCeeecCC-CCCCCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHc-CC
Q 000993 813 FIRWAISNQKSSFKRYEISSVYRRAI-GHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF-FH 878 (1196)
Q Consensus 813 iaR~~a~~~~~P~r~~Y~G~VfR~e~-~~~~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l-gi 878 (1196)
.+|.++. +..|+|+|.+|+|||++. ......+|+|+..=++|..-.. ..+..++..+++.+ |.
T Consensus 183 llr~l~~-~~~piriFEiGrVFR~d~~d~tH~pEF~qlegl~~g~~v~f--~dLKg~le~ll~~lfG~ 247 (350)
T 1b7y_A 183 QVRYMVA-HTPPFRIVVPGRVFRFEQTDATHEAVFHQLEGLVVGEGIAM--AHLKGAIYELAQALFGP 247 (350)
T ss_dssp HHHHHHH-CCSSEEEEEEEEEECCCCCCSSCCSEEEEEEEEEEETTCCH--HHHHHHHHHHHHHHSCS
T ss_pred HHHHHHh-cCCCeeEEEeeeEEECCCCCCCCCChhHEEEEEEECCCCCH--HHHHHHHHHHHHhhcCC
Confidence 9999876 466999999999999854 3334458999999999863222 23445555556655 54
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=8.4e-05 Score=81.80 Aligned_cols=131 Identities=18% Similarity=0.178 Sum_probs=89.2
Q ss_pred eeccCCcE-EEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCccccCCCCcCCC
Q 000993 388 PLGHGGFG-HVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDGDSMWGS 465 (1196)
Q Consensus 388 ~LG~G~fG-~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~~~~~~~~~ 465 (1196)
.+..|..| .||+......+..+++|+-.. .....+.+|...|+.+. +--+.++++++.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~--------------- 90 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG-----SVANDVTDEMVRLNWLTAFMPLPTIKHFIR--------------- 90 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET-----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEE---------------
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC-----CCHhHHHHHHHHHHHhccCCCcCeEEEEEE---------------
Confidence 45556665 699888777788899998652 23457889999999884 223455554442
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC------
Q 000993 466 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ------ 538 (1196)
Q Consensus 466 g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~------ 538 (1196)
+....|+|||+++| ++.+..... ......+..+++..|+-||+.
T Consensus 91 -------------------------~~~~~~lvme~l~G~~~~~~~~~~----~~~~~~~~~~l~~~L~~Lh~~~~~~~~ 141 (272)
T 4gkh_A 91 -------------------------TPDDAWLLTTAIPGKTAFQVLEEY----PDSGENIVDALAVFLRRLHSIPVCNCP 141 (272)
T ss_dssp -------------------------ETTEEEEEEECCCSEEHHHHHHHC----GGGHHHHHHHHHHHHHHHHTSCGGGCC
T ss_pred -------------------------ECCeEEEEEEeeCCccccccccCC----HHHHHHHHHHHHHHHHHhcCCCcccCC
Confidence 12456899999987 665544321 122234555666666666631
Q ss_pred ----------------------------------------------------CCcccCCCcCcEEecCCCCeEEeccCcc
Q 000993 539 ----------------------------------------------------GIIHRDLTPNNIFFDARNDIKIGDFGLA 566 (1196)
Q Consensus 539 ----------------------------------------------------gIiHrDLKp~NILld~~~~vKL~DFGlA 566 (1196)
.++|+|+.|.|||++.++.+-|+||+.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a 221 (272)
T 4gkh_A 142 FNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRV 221 (272)
T ss_dssp BBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTC
T ss_pred cCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccc
Confidence 2689999999999998777779999988
Q ss_pred h
Q 000993 567 K 567 (1196)
Q Consensus 567 ~ 567 (1196)
.
T Consensus 222 ~ 222 (272)
T 4gkh_A 222 G 222 (272)
T ss_dssp E
T ss_pred c
Confidence 5
|
| >3l4g_A Phenylalanyl-tRNA synthetase alpha chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.80 E-value=9.2e-05 Score=88.03 Aligned_cols=129 Identities=12% Similarity=0.026 Sum_probs=89.4
Q ss_pred hhHHHHHHHHHHHHHcCCccccc-cce-----eecC--C-Ccccccc---eEEEeec-----------------------
Q 000993 754 LRDYVVQVTKEMFRQHCAKHLEI-EPM-----YLLG--D-CPQFKRN---TVKLLTH----------------------- 798 (1196)
Q Consensus 754 ~~~~I~~~i~~~f~~~Gy~~I~t-P~~-----~~~~--~-~~~~~~~---my~f~D~----------------------- 798 (1196)
-...+.+.++++|...||.++.| |.+ .|.. . .+...+. .|.+.++
T Consensus 226 Pl~~v~~~Ir~if~~mGF~Ev~t~~~ves~~~NFDaLn~P~dHPaR~~~Dtfyi~~P~~~~~~~e~~~~~v~~~He~g~~ 305 (508)
T 3l4g_A 226 PLLKVRSQFRQIFLEMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDTFFLRDPAEALQLPMDYVQRVKRTHSQGGY 305 (508)
T ss_dssp HHHHHHHHHHHHHHHTTCEECCCCCSEEEHHHHTGGGTCCSSSTTSSTTTSCBBSTTCBCSCCCHHHHHHHHHHHHTCBT
T ss_pred HHHHHHHHHHHHHHHCcCeEeccCCccccHHHHHHhcCCCCCCcccccCceEEEcCccccccccHHHHHhhhhhhhcccc
Confidence 35688899999999999999876 555 1111 1 1111222 2444432
Q ss_pred ------------CCceEeecCCCcHHHHHHHHhC----CCCceeEEEecCeeecCCCC-CCCcceeEeEEEEeCCCCccc
Q 000993 799 ------------GGDLLELSHELRLPFIRWAISN----QKSSFKRYEISSVYRRAIGH-SPPNRYLQGDFDIIGGASALT 861 (1196)
Q Consensus 799 ------------~G~~laLRPD~T~~iaR~~a~~----~~~P~r~~Y~G~VfR~e~~~-~~~~ef~Q~GvEiiG~~~~~a 861 (1196)
.++..+||+.+|+..+|+++.| ...|+|+|++|+|||++... ....+|+|++.-++|.. ..
T Consensus 306 ~s~g~~~~~~~~~~~~~vLRThtsp~~lr~l~~N~~~~~~~PiriFeiGrVFR~d~~DatHlpeFhQlegl~~~~~--v~ 383 (508)
T 3l4g_A 306 GSQGYKYNWKLDEARKNLLRTHTTSASARALYRLAQKKPFTPVKYFSIDRVFRNETLDATHLAEFHQIEGVVADHG--LT 383 (508)
T ss_dssp TBCCCCSCCCHHHHTBEEECCCTHHHHHHHHHHHHTSSSCCCEEEEEEEEEECCSCCCSSSCSEEEEEEEEEEEES--CC
T ss_pred CCccccccccccccccccccCCChHHHHHHHHHhhhhcCCCCceEEEEccEEecCCCCCCcCCeEEEEEEEEECCC--CC
Confidence 1257899999999999999863 34699999999999997644 44457999999887632 34
Q ss_pred hHHHHHHHHHHHHHcCCCCceEEE
Q 000993 862 EAEVLKVTMDIVTRFFHAESCDIH 885 (1196)
Q Consensus 862 DaEvI~la~~~L~~lgi~~~~~i~ 885 (1196)
-.++..++..+++.+|+.. +++.
T Consensus 384 f~dLKg~Le~~l~~lG~~~-~rfr 406 (508)
T 3l4g_A 384 LGHLMGVLREFFTKLGITQ-LRFK 406 (508)
T ss_dssp HHHHHHHHHHHHHTTTCCC-CEEE
T ss_pred HHHHHHHHHHHHHHcCCcc-eEee
Confidence 4567777888888887653 4443
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=6.9e-05 Score=87.67 Aligned_cols=53 Identities=25% Similarity=0.200 Sum_probs=34.8
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC----C-chhHHHHHHHHHHHHhcC
Q 000993 386 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK----S-LPVNDRILREVATLSRLQ 438 (1196)
Q Consensus 386 ~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~----~-~~~~~~~~~Ev~iL~~L~ 438 (1196)
.+.||.|.++.||++....+++.++||....... . .....++..|..+|+.+.
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~ 92 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQG 92 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHH
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhh
Confidence 5689999999999997765678999998653211 0 012345678999998874
|
| >3a5y_A GENX, putative lysyl-tRNA synthetase; aminoacyl-tRNA synthetase paralog, translation, lysyl- synthetase, lysyladenylate analog; HET: KAA; 1.90A {Escherichia coli} PDB: 3a5z_A* 3g1z_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00017 Score=82.52 Aligned_cols=120 Identities=9% Similarity=0.009 Sum_probs=79.9
Q ss_pred hhhhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEe--e---cCCceEeecCCCcHHHHHHHHhCCCC
Q 000993 749 DLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLL--T---HGGDLLELSHELRLPFIRWAISNQKS 823 (1196)
Q Consensus 749 p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~--D---~~G~~laLRPD~T~~iaR~~a~~~~~ 823 (1196)
-...+++..|...+++.|...||-+|+||++.-... ++...+.|++. + ..++.+-||---=.-.-|.++..
T Consensus 33 ~~~lr~Rs~i~~~iR~ff~~~gF~EVeTPiL~~~~~-~~a~~~~F~~~~~~~~~~~~~~~yL~~Spql~~k~l~~~g--- 108 (345)
T 3a5y_A 33 IPNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATV-TDIHLVPFETRFVGPGHSQGMNLWLMTSPEYHMKRLLVAG--- 108 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEECCCCSEESSCC-CCTTCCCCEEEECCSTTSCCEEEEECSCSHHHHHHHHHTT---
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEecCC-CCCccceEEEEecCcccccCCCEeecCCHHHHHHHHHHcC---
Confidence 346788999999999999999999999999843222 21233445432 1 11245557632222233455532
Q ss_pred ceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHc
Q 000993 824 SFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 876 (1196)
Q Consensus 824 P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l 876 (1196)
--|+|++|+|||+|....++. ||+|+++|..+.+ -.+++.++-+.++.+
T Consensus 109 ~~rvyqIg~~FR~E~~~~rH~pEFt~lE~e~af~d----~~d~m~~~E~li~~v 158 (345)
T 3a5y_A 109 CGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYD----MYRLMNEVDDLLQQV 158 (345)
T ss_dssp CCSEEEEEEEECCCCCBTTBCSEEEEEEEEEETCC----HHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcceeCCCCcccccchhheeeeeeeCCC----HHHHHHHHHHHHHHH
Confidence 249999999999988744443 7999999999863 345677776666664
|
| >2du3_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase/RNA complex; HET: SEP; 2.60A {Archaeoglobus fulgidus} PDB: 2du4_A 2du5_A* 2du6_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=7.3e-05 Score=89.28 Aligned_cols=76 Identities=13% Similarity=0.185 Sum_probs=58.8
Q ss_pred eEeecCCCcHHHHHHHHhC---CCCceeEEEecCeeecCCC-CC-CCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHc
Q 000993 802 LLELSHELRLPFIRWAISN---QKSSFKRYEISSVYRRAIG-HS-PPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 876 (1196)
Q Consensus 802 ~laLRPD~T~~iaR~~a~~---~~~P~r~~Y~G~VfR~e~~-~~-~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l 876 (1196)
..+||+.+++.+...+..| +..|+|+|++|+|||++.+ +. +..+|+|+++.+.|..... .++..++..+|+.|
T Consensus 180 ~svLRTsLlPgLL~~lr~N~~r~~~pvrLFEIG~VFr~d~~~d~th~~Ef~qLagli~G~~vdf--~dLKgilE~LL~~L 257 (534)
T 2du3_A 180 TLTLRSHMTTGWFITLSHIADKLPLPIKLFSIDRCFRREQGEDATRLYTYFSASCVLVDEELSV--DDGKAVAEALLRQF 257 (534)
T ss_dssp EEEECSSHHHHHHHHHHTTTTTSCSSEEEEEEEEEECCCTTCSSSCCSEEEEEEEEEECSSCCH--HHHHHHHHHHHGGG
T ss_pred ccccCccchhhHHHHHHHHHhCCCCCeeEEEEeeEEecCccccccccceeeEEEEEEECCCCCH--HHHHHHHHHHHHHc
Confidence 4799999999666555543 3569999999999998654 43 4568999999999974322 56888888888888
Q ss_pred CCC
Q 000993 877 FHA 879 (1196)
Q Consensus 877 gi~ 879 (1196)
|+.
T Consensus 258 Gi~ 260 (534)
T 2du3_A 258 GFE 260 (534)
T ss_dssp TCC
T ss_pred CCC
Confidence 875
|
| >3nem_A Aspartyl-tRNA synthetase; rossmann fold, OB fold, ligase; HET: AMO ATP; 1.89A {Thermococcus kodakarensis} PDB: 3nel_A* 3nen_A 1b8a_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00039 Score=82.03 Aligned_cols=116 Identities=12% Similarity=0.066 Sum_probs=79.8
Q ss_pred hhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEeecCCceEeecCCCcHHHHHHHHhCCCCceeEEEe
Q 000993 751 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEI 830 (1196)
Q Consensus 751 ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~~~~P~r~~Y~ 830 (1196)
-.+++..+...+++.|...||-+|+||++.-... +-..++|.+. .-|+.+.||..--.-.-|.++. .--|+|++
T Consensus 136 ~~~~Rs~i~~~iR~f~~~~gF~EVeTPiL~~~~~--eg~~~~f~~~-~~~~~~yL~~Spql~~q~l~~~---g~~rvf~i 209 (438)
T 3nem_A 136 IFKIRSSVFKAVRDFFHENGFIEIHTPKIIATAT--EGGTELFPMK-YFEEDAFLAQSPQLYKQIMMAS---GLDRVYEI 209 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSEESSCS--SCSSSCCEEE-ETTEEEEECSCSHHHHHHGGGT---TCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHCCcEEEeCCEEecCCC--CCCccceeEe-eCCccEEEecChHHHHHHHHhc---CCCceEEE
Confidence 4677889999999999999999999999844322 1122356553 3477889985333333344332 34599999
Q ss_pred cCeeecCCCCCCCc--ceeEeEEEEeCCCCccchHHHHHHHHHHHHH
Q 000993 831 SSVYRRAIGHSPPN--RYLQGDFDIIGGASALTEAEVLKVTMDIVTR 875 (1196)
Q Consensus 831 G~VfR~e~~~~~~~--ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~ 875 (1196)
|++||+|..+.+|. ||+|+++|..+.++.. +++.++-+.++.
T Consensus 210 ~~~FR~E~~~t~RH~pEFt~le~e~a~~~~~~---d~m~~~E~li~~ 253 (438)
T 3nem_A 210 APIFRAEEHNTTRHLNEAWSIDSEMAFIEDEE---EVMSFLERLVAH 253 (438)
T ss_dssp EEEECCCSSCCTTCCSEEEEEEEEEESCSSHH---HHHHHHHHHHHH
T ss_pred cceEECCCCCCcccccceeeeeeeeccCccHH---HHHHHHHHHHHH
Confidence 99999998765433 8999999999876432 355555554443
|
| >2xgt_A Asparaginyl-tRNA synthetase, cytoplasmic; ligase, ATP-binding, protein biosynthesis; HET: NSS; 1.90A {Brugia malayi} PDB: 2xti_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00051 Score=81.24 Aligned_cols=112 Identities=13% Similarity=0.041 Sum_probs=80.1
Q ss_pred hhhHhhHHHHHHHHHHHHHcCCccccccceeecCC-CcccccceEEEeecCCceEeec--CCCcHHHHHHHHhCCCCcee
Q 000993 750 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGD-CPQFKRNTVKLLTHGGDLLELS--HELRLPFIRWAISNQKSSFK 826 (1196)
Q Consensus 750 ~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~-~~~~~~~my~f~D~~G~~laLR--PD~T~~iaR~~a~~~~~P~r 826 (1196)
...+++..|...+++.|...||-+|+||+++-... |. .++|.+ +.-|+.+.|| |++-.. +.++ .--|
T Consensus 130 ~~~r~Rs~i~~~iR~ff~~~gFlEVeTPiL~~s~~eG~---~~~F~~-~~~g~~~~L~~SpqLylq--~l~~----g~~r 199 (435)
T 2xgt_A 130 ALLRLRAAATRAMREHFYNAGYVEVAPPTLVQTQVEGG---STLFNL-DYFGEQSFLTQSSQLYLE--TCIP----TLGD 199 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESCCSSCT---TSCCEE-EETTEEEEECSCSHHHHH--HHHH----HHCS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEECCeEeeccCCCc---hhceee-ccCCcccccCCChHHHHH--Hhhh----ccCc
Confidence 34788899999999999999999999999843322 22 234543 4557888898 444333 2332 1349
Q ss_pred EEEecCeeecCCCCC-CCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHH
Q 000993 827 RYEISSVYRRAIGHS-PPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTR 875 (1196)
Q Consensus 827 ~~Y~G~VfR~e~~~~-~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~ 875 (1196)
+|++|++||+|..+. +.. ||+|+++|..+.+ ..+++.++.+.++.
T Consensus 200 vfeIg~~FR~E~~~t~RH~~EFT~lE~e~af~d----~~d~m~~~E~li~~ 246 (435)
T 2xgt_A 200 VFCIAQSYRAEKSRTRRHLAEYAHVEAECPFIT----LDDLMEKIEELVCD 246 (435)
T ss_dssp EEEEEEEECCCSSCCTTCCSEEEEEEEEEESCC----HHHHHHHHHHHHHH
T ss_pred eEEEecceecCCCCccccccceeEEEEEEecCC----HHHHHHHHHHHHHH
Confidence 999999999998765 444 8999999999864 34566666666654
|
| >2du7_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase, structural genomics, NPPSFA; 3.60A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0006 Score=81.37 Aligned_cols=76 Identities=17% Similarity=0.212 Sum_probs=57.0
Q ss_pred ceEeecCCCcHHHHHHHHhC---CCCceeEEEecCeeecCC--CCCCCcceeEeEEEEeCCCCccchHHHHHHHHHHHHH
Q 000993 801 DLLELSHELRLPFIRWAISN---QKSSFKRYEISSVYRRAI--GHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTR 875 (1196)
Q Consensus 801 ~~laLRPD~T~~iaR~~a~~---~~~P~r~~Y~G~VfR~e~--~~~~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~ 875 (1196)
+..+||+.+++.+...+..| +..|+|+|.+|+|||.+. ...+..+|+|+++-+.|.. ..-.++..++..+|+.
T Consensus 191 e~svLRTsLlPGLL~~vr~N~~r~~~pvrlFEiGrVFr~D~~~d~th~~ef~qLaglv~G~~--vdF~DLKG~Le~ll~~ 268 (549)
T 2du7_A 191 TTLTLRSHMTSGWFITLSSLIKKRKLPLKLFSIDRCFRREQREDRSHLMSYHSASCVVVGED--VSVDDGKVVAEGLLAQ 268 (549)
T ss_dssp EEEECCSTTHHHHHHHHHTTTTTSCSSEEEEEEEEECCCCSSCSSSCCSCEEEEEEEEECTT--CCHHHHHHHHHHHHGG
T ss_pred cccccccccchhHHHHHHHHHhcCCCCeEEEEEeeEEecCCcccCcCCCcceEEEEEEECCC--CCHHHHHHHHHHHHHH
Confidence 46789999999655555443 456999999999999754 2334568999999999963 3345677777888888
Q ss_pred cCC
Q 000993 876 FFH 878 (1196)
Q Consensus 876 lgi 878 (1196)
||+
T Consensus 269 LGi 271 (549)
T 2du7_A 269 FGF 271 (549)
T ss_dssp GTC
T ss_pred cCC
Confidence 886
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0024 Score=67.68 Aligned_cols=133 Identities=17% Similarity=0.184 Sum_probs=90.5
Q ss_pred CHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHH-HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCC
Q 000993 505 TLRQVFESY-DHFDKELAWHLFRQIVEGLAHI-HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPT 582 (1196)
Q Consensus 505 sL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yL-Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~ 582 (1196)
+|.++|... .+++++++|.++.|.+.+|.-+ ++..-..+=+-|..|++..+|+|.+.+ ..+.
T Consensus 34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~--------------- 97 (229)
T 2yle_A 34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD--------------- 97 (229)
T ss_dssp EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C------------------
T ss_pred cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc---------------
Confidence 799999865 5799999999999999998876 222212344457999999999988763 1110
Q ss_pred CCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhcCCchhHHHHHHHHHhhhcCCCC-CccccCCHH
Q 000993 583 DTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELP-PSWVAKFSE 661 (1196)
Q Consensus 583 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELltPf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~ 661 (1196)
.....+.|||.... ..+.+.=|||||+++|.-+- ..++ ......++.
T Consensus 98 ------------~~~~~~~~pe~~~~--~~te~~~IysLG~tLY~ALD------------------ygL~e~eE~eLS~~ 145 (229)
T 2yle_A 98 ------------AGEPPPVAGKLGYS--QCMETEVIESLGIIIYKALD------------------YGLKENEERELSPP 145 (229)
T ss_dssp ---------------------CCSSS--SSCHHHHHHHHHHHHHHHHT------------------TTCCTTEEECCCHH
T ss_pred ------------ccccCCCChhhccc--cchHHHHHHHHHHHHHHHhh------------------cCCCcccchhhCHH
Confidence 11224668887642 35788999999999999872 2222 344567789
Q ss_pred HHHHHHHcccC-------------------------CCCCCCCHHHHHh
Q 000993 662 QESLLRRLMSP-------------------------SPSDRPSATELLQ 685 (1196)
Q Consensus 662 l~~LI~~cL~~-------------------------dP~~RPta~eiL~ 685 (1196)
+.+||..|... .+..|+++.+|++
T Consensus 146 LE~LL~~Mt~~~~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~ 194 (229)
T 2yle_A 146 LEQLIDHMANTVEADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMK 194 (229)
T ss_dssp HHHHHHHHTTCCC--------------------CCSCCCCCCSHHHHHH
T ss_pred HHHHHHHHHhcccccccccccccccccccccccccccccCcCCHHHHHH
Confidence 99999999866 2467888888876
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0023 Score=72.45 Aligned_cols=30 Identities=17% Similarity=0.309 Sum_probs=27.5
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAK 567 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~ 567 (1196)
..++|+|+++.|||++.++.+.|+||+.+.
T Consensus 222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp CCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred CceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 579999999999999888899999999875
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00089 Score=76.84 Aligned_cols=66 Identities=6% Similarity=-0.033 Sum_probs=40.4
Q ss_pred eEEeee-ccCCcEEEEEEEEc--c----CCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcC-C--CCeeeeeeee
Q 000993 384 EELQPL-GHGGFGHVVLCKNK--L----DGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQ-H--QHVVRYYQAW 449 (1196)
Q Consensus 384 ~~~~~L-G~G~fG~Vy~a~~~--~----~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~-H--pnIV~l~~~~ 449 (1196)
...+.| +.|....+|++... . ++..+++|+...... .......+.+|+.+|+.+. + -.+.+++..+
T Consensus 23 ~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~ 99 (357)
T 3ats_A 23 TVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIE 99 (357)
T ss_dssp EEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEE
T ss_pred EEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEc
Confidence 345678 88999999988653 1 166889997543210 0000134678888888874 2 3456666544
|
| >1c0a_A Aspartyl tRNA synthetase; protein-RNA complex, ligase/RNA complex; HET: 4SU H2U QUO G7M 5MU PSU AMP AMO; 2.40A {Escherichia coli} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1il2_A* 1eqr_A* | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0034 Score=76.77 Aligned_cols=99 Identities=13% Similarity=0.137 Sum_probs=69.4
Q ss_pred hhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEee--cCCceEeecCCCcHHHH--HHHHhCCCCcee
Q 000993 751 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLT--HGGDLLELSHELRLPFI--RWAISNQKSSFK 826 (1196)
Q Consensus 751 ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D--~~G~~laLRPD~T~~ia--R~~a~~~~~P~r 826 (1196)
-.++|..|...+|+.|...||-+|+||++.-...+. .+. |.... ..|..++||- .+++. |.++. .=-|
T Consensus 137 ~l~~Rs~i~~~iR~fl~~~gFlEVeTPiL~~s~~eG--Ar~-F~v~~~~~~~~~y~L~q--SPQl~kq~Lmv~---G~~r 208 (585)
T 1c0a_A 137 RLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEG--ARD-YLVPSRVHKGKFYALPQ--SPQLFKQLLMMS---GFDR 208 (585)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSSBCCCSSS--SCC-CEEECSSSTTCEEECCS--CSHHHHHHHHHT---TCCE
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEEeCCEEecCCCCC--Ccc-ceecccccCCceEeCcc--CHHHHHHHHHhc---CCCc
Confidence 467888999999999999999999999985332221 122 43322 3466777873 34444 33332 2249
Q ss_pred EEEecCeeecCCCCCCCc-ceeEeEEEEeCCC
Q 000993 827 RYEISSVYRRAIGHSPPN-RYLQGDFDIIGGA 857 (1196)
Q Consensus 827 ~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~ 857 (1196)
+|++|++||+|.....+. ||+|+++|.-+.+
T Consensus 209 vfqI~~~FR~E~~~t~r~pEFT~lE~e~af~d 240 (585)
T 1c0a_A 209 YYQIVKCFRDEDLRADRQPEFTQIDVETSFMT 240 (585)
T ss_dssp EEEEEEEECCCCCBTTBCSEEEEEEEEEESCC
T ss_pred eEEEeceeecCCCCCCcCcccceeeeeecCCC
Confidence 999999999987654444 8999999998864
|
| >1l0w_A Aspartyl-tRNA synthetase; space-grown crystal, dimeric enzyme, flexible domains, ligase; 2.01A {Thermus thermophilus} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1efw_A* 1g51_A | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0037 Score=76.27 Aligned_cols=99 Identities=11% Similarity=0.106 Sum_probs=69.5
Q ss_pred hhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEee--cCCceEeecCCCcHHHH--HHHHhCCCCcee
Q 000993 751 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLT--HGGDLLELSHELRLPFI--RWAISNQKSSFK 826 (1196)
Q Consensus 751 ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D--~~G~~laLRPD~T~~ia--R~~a~~~~~P~r 826 (1196)
-.++|..+...+|+.|...||-+|+||++.-...+. .+. |.... ..|..++||- .+++. |.++. .=-|
T Consensus 143 ~l~~Rs~i~~~iR~fl~~~gF~EVeTPiL~~s~~eG--Ar~-F~v~~~~~~~~~y~L~q--SPQl~kq~Lmv~---G~~r 214 (580)
T 1l0w_A 143 NLRLRHRVIKAIWDFLDREGFVQVETPFLTKSTPEG--ARD-FLVPYRHEPGLFYALPQ--SPQLFKQMLMVA---GLDR 214 (580)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSSBCCCSSS--SCC-CEEECTTSTTEEEECCS--CSHHHHHHHHHT---TCSE
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEEeCCEEecCCCCC--CCC-ccccccccCCceeECcc--CHHHHHHHHHHh---ccCC
Confidence 467888999999999999999999999985332221 122 43222 2466677883 44444 33332 2249
Q ss_pred EEEecCeeecCCCCCCCc-ceeEeEEEEeCCC
Q 000993 827 RYEISSVYRRAIGHSPPN-RYLQGDFDIIGGA 857 (1196)
Q Consensus 827 ~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~ 857 (1196)
+|++|+|||+|.....+. ||+|+++|.-+.+
T Consensus 215 vfqI~~~FR~E~~~~~r~pEFT~lE~e~af~d 246 (580)
T 1l0w_A 215 YFQIARCFRDEDLRADRQPDFTQLDLEMSFVE 246 (580)
T ss_dssp EEEEEEEECCCCCCSSCCSEEEEEEEEEESCC
T ss_pred eEEEeceeeCCCCCCCcCCCccceeeeecCCC
Confidence 999999999987665444 8999999998864
|
| >4ex5_A Lysine--tRNA ligase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LYS; 2.40A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0064 Score=73.02 Aligned_cols=102 Identities=10% Similarity=-0.005 Sum_probs=70.3
Q ss_pred hhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEE-eecCCceEeecCCCcHHHHHHHHhCCCCceeEEE
Q 000993 751 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKL-LTHGGDLLELSHELRLPFIRWAISNQKSSFKRYE 829 (1196)
Q Consensus 751 ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f-~D~~G~~laLRPD~T~~iaR~~a~~~~~P~r~~Y 829 (1196)
-.+++..|...+++.|...||-+|+||++.-. .++.. .+.|.. .+.-|..+.||---=.-.-|.++. .--|+|+
T Consensus 203 ~fr~Rs~i~~~iR~ff~~~gFlEVeTPiL~~~-~gGA~-a~pF~t~~n~~~~~~yL~~SpqLylk~L~v~---G~~rVye 277 (529)
T 4ex5_A 203 TFRARTKAIASIRKFMGDADFMEVETPMLHPI-PGGAA-AKPFVTHHNALDMEMFLRIAPELYLKRLIVG---GFERVFE 277 (529)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSEESS-CCSSS-SCCCEEEETTTTEEEEECSCSHHHHHHHHHT---TCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEeCCeeecc-CCCCc-ccccccccccCCcceecccCHHHHHHHHHhc---CCCcEEE
Confidence 46788899999999999999999999998532 22221 233322 234467788884222222355542 2359999
Q ss_pred ecCeeecCCCCCCCc-ceeEeEEEEeCCC
Q 000993 830 ISSVYRRAIGHSPPN-RYLQGDFDIIGGA 857 (1196)
Q Consensus 830 ~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~ 857 (1196)
+|++||+|....+.. ||+|+.+|.-+.+
T Consensus 278 Ig~~FR~E~~~~rH~pEFtmlE~e~af~d 306 (529)
T 4ex5_A 278 INRNFRNEGVSPRHNPEFTMMEFYAAYTD 306 (529)
T ss_dssp EEEEECCSCCBTTBCSEEEEEEEEEETCC
T ss_pred eehheecCCCCCCcccHhHhhhhhhhcCC
Confidence 999999987654333 7999999998753
|
| >3bju_A Lysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP- binding, cytoplasm, ligase, nucleotide-binding, phosphoprotein, polymorphism; HET: LYS ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0068 Score=73.07 Aligned_cols=100 Identities=10% Similarity=0.061 Sum_probs=71.1
Q ss_pred hhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEe-ecCCceEeecCCCcHHHH--HHHHhCCCCceeE
Q 000993 751 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLL-THGGDLLELSHELRLPFI--RWAISNQKSSFKR 827 (1196)
Q Consensus 751 ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~-D~~G~~laLRPD~T~~ia--R~~a~~~~~P~r~ 827 (1196)
-.+++..|...+++.|...||-+|+||++.-. .++. ..+.|... +.-|..+.||- .+++. |.++. .--|+
T Consensus 175 ~~r~Rs~i~~~iR~f~~~~gF~EVeTPiL~~~-~gGa-~a~~F~t~~~~~~~~~yL~~--SpqL~lk~liv~---g~~rV 247 (521)
T 3bju_A 175 KFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGGA-VAKPFITYHNELDMNLYMRI--APELYHKMLVVG---GIDRV 247 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSEESS-CCSS-SCCCCEEEETTTTEEEEECS--CSHHHHHHHHHT---TCCEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEeCceeecc-CCCc-cccceeeecccCCcceEeeC--CHHHHHHHHHhc---CcCce
Confidence 36778899999999999999999999998532 2222 13444332 33478889994 34443 45542 23499
Q ss_pred EEecCeeecCCCCCCCc-ceeEeEEEEeCCC
Q 000993 828 YEISSVYRRAIGHSPPN-RYLQGDFDIIGGA 857 (1196)
Q Consensus 828 ~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~ 857 (1196)
|++|++||+|....+.. ||+|+.+|.-+.+
T Consensus 248 yeig~~FR~E~~~trH~pEFtmlE~e~af~d 278 (521)
T 3bju_A 248 YEIGRQFRNEGIDLTHNPEFTTCEFYMAYAD 278 (521)
T ss_dssp EEEEEEECCSCCBTTBCSEEEEEEEEEETCC
T ss_pred EEEEcceeCCCCCCccchhhhhhhhhhhcCC
Confidence 99999999987654333 7999999998853
|
| >3pco_A Phenylalanyl-tRNA synthetase, alpha subunit; aminoacylation, tRNA-binding, DNA-binding domain, four-helix aminoacyl-tRNA synthetase, ATP-binding; HET: PHE AMP; 3.02A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0017 Score=73.48 Aligned_cols=96 Identities=11% Similarity=-0.043 Sum_probs=67.0
Q ss_pred hHHHHHHHHHHHHHcCCccccccceee-----cCC--Ccc-cc---cceEEEeecCCceEeecCCCcHHHHHHHHhCCCC
Q 000993 755 RDYVVQVTKEMFRQHCAKHLEIEPMYL-----LGD--CPQ-FK---RNTVKLLTHGGDLLELSHELRLPFIRWAISNQKS 823 (1196)
Q Consensus 755 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~-----~~~--~~~-~~---~~my~f~D~~G~~laLRPD~T~~iaR~~a~~~~~ 823 (1196)
...+.+.++++|...||.++.+|.+.- ..- ... .. ...|.+. +..+||..+++..+|.++. +..
T Consensus 109 ~~~~~~~Ir~if~~~Gf~ev~~~~ve~~~~nFd~Ln~p~dhpaR~~~dt~~i~----e~~vLRThtsp~~lr~l~~-~~~ 183 (327)
T 3pco_A 109 VTRTIDRIESFFGELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWFD----TTRLLRTQTSGVQIRTMKA-QQP 183 (327)
T ss_dssp HHHHHHHHHHHHHTTTCBCCCCCSEECTCCCCCTTTCCSSSHHHHHTTCCBSS----SSCEECSCTHHHHHHHHTT-CCS
T ss_pred HHHHHHHHHHHHHHCCCeEEECCCccCCHHHHHhhCCCCCChhhcccccEEeC----CCceecccCCHHHHHHHHh-CCC
Confidence 457888999999999999999998711 111 011 11 1234332 4579999888888998865 457
Q ss_pred ceeEEEecCeeecCCCCCCCcceeEeEEEEeC
Q 000993 824 SFKRYEISSVYRRAIGHSPPNRYLQGDFDIIG 855 (1196)
Q Consensus 824 P~r~~Y~G~VfR~e~~~~~~~ef~Q~GvEiiG 855 (1196)
|+|+|.+|+|||.+......-.|+|+..=++|
T Consensus 184 pirifeiGrVyR~d~d~th~p~fhqlegl~v~ 215 (327)
T 3pco_A 184 PIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVD 215 (327)
T ss_dssp SCCBCCEECCBCSCCBTTBCSBCCEEEEEEEE
T ss_pred CeeEEeeccEEecCCCcccCCcccEEEEEEEC
Confidence 99999999999986333333469998655555
|
| >2rhq_A Phenylalanyl-tRNA synthetase alpha chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_A* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0048 Score=69.17 Aligned_cols=118 Identities=9% Similarity=0.039 Sum_probs=78.3
Q ss_pred hHHHHHHHHHHHHHcCCccccccceee-----cCC-Ccc-c-c---cceEEEeecCCceEeecCCCcHHHHHHHHhCC-C
Q 000993 755 RDYVVQVTKEMFRQHCAKHLEIEPMYL-----LGD-CPQ-F-K---RNTVKLLTHGGDLLELSHELRLPFIRWAISNQ-K 822 (1196)
Q Consensus 755 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~-----~~~-~~~-~-~---~~my~f~D~~G~~laLRPD~T~~iaR~~a~~~-~ 822 (1196)
...+.+.++++|...||.|+.+|.+.- ... ... . . ...+.+. +..+||+-+++.+.|.++.|. .
T Consensus 55 ~~~~~~~iR~~l~~~Gf~Ev~~s~l~~~~~nf~~l~~~~~~par~~~d~~~l~----e~~vLRtsl~p~ll~~l~~N~~~ 130 (294)
T 2rhq_A 55 LTRTVEEIEDLFLGLGYEIVDGYEVEQDYYNFEALNLPKSHPARDMQDSFYIT----DEILMRTHTSPVQARTMEKRNGQ 130 (294)
T ss_dssp HHHHHHHHHHHHHTTTCEECCCCSEEEHHHHTGGGTCCTTCGGGCTTTSCBSS----SSEEECSSSHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHCCCEEEcCcceeeehhhHHhhCCCCCccccccCCcEEEc----CcceeeccCHHHHHHHHHhcCCC
Confidence 457888999999999999998777611 111 111 0 0 1123342 567999999999999998774 5
Q ss_pred CceeEEEecCeeecCC-CCCCCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHc-CC
Q 000993 823 SSFKRYEISSVYRRAI-GHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF-FH 878 (1196)
Q Consensus 823 ~P~r~~Y~G~VfR~e~-~~~~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l-gi 878 (1196)
.|+|+|.+|+|||++. ......||+|+.+=+.|..-.. .++..++..+++.+ |+
T Consensus 131 ~~~riFEiG~Vfr~d~~d~~h~~Ef~~Le~~~~g~~~df--~dlKg~le~ll~~l~g~ 186 (294)
T 2rhq_A 131 GPVKIICPGKVYRRDSDDATHSHQFTQIEGLVVDKNIKM--SDLKGTLELVAKKLFGA 186 (294)
T ss_dssp SCEEEEEEEEEECCCCCBTTBCSEEEEEEEEEEESSCCH--HHHHHHHHHHHHHHHCT
T ss_pred CCccEEEEcCEEecCCCCCCCCChhhEEEEEEECCCCCH--HHHHHHHHHHHHHHhCC
Confidence 6999999999999743 2222348999988888852111 23444455555555 55
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0031 Score=74.23 Aligned_cols=32 Identities=19% Similarity=0.372 Sum_probs=28.1
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchh
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 568 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~ 568 (1196)
+...++|+|++|.|||++.++ ++|+||+.+..
T Consensus 230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~ 261 (420)
T 2pyw_A 230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY 261 (420)
T ss_dssp BCCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred CCCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence 456799999999999998776 99999998864
|
| >3m4p_A Ehasnrs, asparaginyl-tRNA synthetase, putative; aminoacyl-tRNA synthetase, tRNA ligase, AARS, translation, ATP-binding, nucleotide-binding; HET: 4AD; 2.83A {Entamoeba histolytica} PDB: 3m4q_A | Back alignment and structure |
|---|
Probab=96.85 E-value=0.003 Score=74.88 Aligned_cols=113 Identities=14% Similarity=0.074 Sum_probs=77.3
Q ss_pred hhHhhHHHHHHHHHHHHHcCCccccccceeecCC-CcccccceEEEeecCCceEeecCCCcHHHHHHHHhCCCCceeEEE
Q 000993 751 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYE 829 (1196)
Q Consensus 751 ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~~~~P~r~~Y 829 (1196)
-.+++..|...+++.|...||-+|+||++.-... |. .++|.+ +.-|+.+.||----.-.-++++. --|+|+
T Consensus 155 ~lr~Rs~i~~~iR~ff~~~gF~EVeTPiL~~s~~eGg---~~~f~~-~~~~~~~~L~~SpqL~lq~l~~g----~~rVye 226 (456)
T 3m4p_A 155 VLQLRSEIQWYFRKYYHDNHFTEIQPPTIVKTQCEGG---STLFKL-QYFNEPAYLTQSSQLYLESVIAS----LGKSFC 226 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSEEC---------CCCCEE-EETTEEEEECSCCHHHHHTTHHH----HSSEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEeCCeeecCCCCCc---cccccc-cccCCCcccccCHHHHHHHHHhc----cCcEEE
Confidence 4678889999999999999999999999843322 22 123433 44477788886544444344431 359999
Q ss_pred ecCeeecCCCCCCCc--ceeEeEEEEeCCCCccchHHHHHHHHHHHHH
Q 000993 830 ISSVYRRAIGHSPPN--RYLQGDFDIIGGASALTEAEVLKVTMDIVTR 875 (1196)
Q Consensus 830 ~G~VfR~e~~~~~~~--ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~ 875 (1196)
+|++||+|.....|. ||+|+++|.-+.+ --+++.++-+.++.
T Consensus 227 ig~~FR~E~~~t~rH~pEFtmlE~e~af~d----~~d~m~~~E~li~~ 270 (456)
T 3m4p_A 227 MLSSYRAEQSRTVRHLAEYLHLEAELPFIS----FEDLLNHLEDLVCT 270 (456)
T ss_dssp EEEEECCCSCCCSSCCSEEEEEEEEEESCC----HHHHHHHHHHHHHH
T ss_pred EEhheecCCCCCCcchHHHHHhHHHHhcCC----HHHHHHHHHHHHHH
Confidence 999999987654333 8999999998863 23456666555544
|
| >3ig2_A Phenylalanyl-tRNA synthetase beta chain; phers, MCSG, structural genomics, midwest center for structural GE protein structure initiative; HET: MSE; 2.09A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0089 Score=63.75 Aligned_cols=125 Identities=14% Similarity=0.086 Sum_probs=85.2
Q ss_pred hHHHHHHHHHHHHHcCCccccccceeecC---C-CcccccceEEEeecCC-ceEeecCCCcHHHHHHHHhCCC---Ccee
Q 000993 755 RDYVVQVTKEMFRQHCAKHLEIEPMYLLG---D-CPQFKRNTVKLLTHGG-DLLELSHELRLPFIRWAISNQK---SSFK 826 (1196)
Q Consensus 755 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~---~-~~~~~~~my~f~D~~G-~~laLRPD~T~~iaR~~a~~~~---~P~r 826 (1196)
.+++++.+++.+...||.||.|-.|.-.. . .....+...++.++-. +.-+||+.+.+.+.+.++.|.. .++|
T Consensus 6 ~~~~~~~ir~~l~~~G~~Evitysf~~~~~~~~~~~~~~~~~v~l~NPls~e~~vmRtsLlpgLL~~~~~N~~r~~~~v~ 85 (213)
T 3ig2_A 6 SNKLQNLVAEQLVGCGFNEILNNSLTRAAYYDGLESYPSKNLVMLLNPLSADLNCMRQTLLFGGLESIAHNANRKNADLK 85 (213)
T ss_dssp HHHHHHHHHHHHHHTTCEECCCCSEECGGGGTTCSSSCGGGCEEBSSGGGCSCCEECSCSHHHHHHHHHHC------CCE
T ss_pred HHHHHHHHHHHHHHCCCeEEeccccCCHHHHHhhcccCcCCeEEEeCCcchhHHHHHHHhHHHHHHHHHHHhcCCCCCee
Confidence 45788889999999999999999983221 1 1112245677777764 4558999999999999988643 3689
Q ss_pred EEEecCeeecCCC-------CCCCcceeEeEEEEeCCC--------CccchH-HHHHHHHHHHHHcCCC
Q 000993 827 RYEISSVYRRAIG-------HSPPNRYLQGDFDIIGGA--------SALTEA-EVLKVTMDIVTRFFHA 879 (1196)
Q Consensus 827 ~~Y~G~VfR~e~~-------~~~~~ef~Q~GvEiiG~~--------~~~aDa-EvI~la~~~L~~lgi~ 879 (1196)
+|.+|+||+.+.. ..+..|..++++=+.|.. ....|. ++-.++..++..+|+.
T Consensus 86 lFEiG~Vf~~~~~~~~~~~~~~~~~e~~~la~~~~G~~~~~~w~~~~~~~df~dlKg~ve~ll~~lg~~ 154 (213)
T 3ig2_A 86 FFEFGNCYHFDAEKKNPEKVLAPYSEDYHLGLWVTGKMVSNSWAHADENTSVYELKAYVENIFKRLGLD 154 (213)
T ss_dssp EEEEEEEEEECC----------CEEEEEEEEEEEEEEECCSCC----CHHHHHHHHHHHHHHHHHTTBC
T ss_pred EEEeeeEEecCcccccccccccccchhHEEEEEEECCCccccCCCCCCCcCHHHHHHHHHHHHHHhCCC
Confidence 9999999997431 123356777887777732 123453 5566667777888875
|
| >2odr_B Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.01 Score=71.46 Aligned_cols=76 Identities=16% Similarity=0.254 Sum_probs=53.8
Q ss_pred eEeecCCCcHHHH---HHHHhCCCCceeEEEecCeeecCCC--CCCCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHc
Q 000993 802 LLELSHELRLPFI---RWAISNQKSSFKRYEISSVYRRAIG--HSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 876 (1196)
Q Consensus 802 ~laLRPD~T~~ia---R~~a~~~~~P~r~~Y~G~VfR~e~~--~~~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l 876 (1196)
..+||+.+++.+. |....++..|+|+|.+|+|||.+.. .....+|+|++.=+.|..-.. .++-.++..+++.|
T Consensus 199 ~sVLRTsLlPGLL~~vr~N~~R~~~pvRLFEIGrVFR~D~~lDath~~Ef~qLeGlv~G~~vdF--~DLKGvLE~LL~~L 276 (648)
T 2odr_B 199 KLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHLMTYHSASCAIAGEGVDI--NDGKAIAEGLLSQF 276 (648)
T ss_dssp SEEECCCTHHHHHHHHHHHTTTSCSCEEEEEEEEEECCCSCCCSSCCSEEEEEEEEEECTTCCH--HHHHHHHHHHHHTT
T ss_pred cCcccccchhhHHHHHHHHHhcCCCCeEEEEEeeEEecCccccccCCCcceEEEEEEECCCCCH--HHHHHHHHHHHHHc
Confidence 5689999988544 4443344679999999999997542 223468999999999973222 35666777777777
Q ss_pred CCC
Q 000993 877 FHA 879 (1196)
Q Consensus 877 gi~ 879 (1196)
|+.
T Consensus 277 Gi~ 279 (648)
T 2odr_B 277 GFT 279 (648)
T ss_dssp TCC
T ss_pred CCC
Confidence 863
|
| >2odr_A Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.01 Score=71.44 Aligned_cols=76 Identities=16% Similarity=0.254 Sum_probs=53.8
Q ss_pred eEeecCCCcHHHH---HHHHhCCCCceeEEEecCeeecCCC--CCCCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHc
Q 000993 802 LLELSHELRLPFI---RWAISNQKSSFKRYEISSVYRRAIG--HSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 876 (1196)
Q Consensus 802 ~laLRPD~T~~ia---R~~a~~~~~P~r~~Y~G~VfR~e~~--~~~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l 876 (1196)
..+||+.+++.+. |....++..|+|+|.+|+|||.+.. .....+|+|++.=+.|..-.. .++-.++..+++.|
T Consensus 199 ~sVLRTSLlPGLL~~lr~N~~R~~~pvRLFEIGrVFR~D~~lDath~~Ef~qLeGlv~G~~vdF--~DLKGvLE~LL~~L 276 (665)
T 2odr_A 199 KLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHLMTYHSASCAIAGEGVDI--NDGKAIAEGLLSQF 276 (665)
T ss_dssp SEEECCCTHHHHHHHHHHHTTTSCSCEEEEEEEEEECCCSCCCSSCCSEEEEEEEEEECTTCCH--HHHHHHHHHHHHTT
T ss_pred cCcccccchhhHHHHHHHHHhcCCCCeEEEEEeeEEecCccccccCCCcceEEEEEEECCCCCH--HHHHHHHHHHHHHc
Confidence 5689999988544 4443344679999999999997542 223468999999999973222 35666677777777
Q ss_pred CCC
Q 000993 877 FHA 879 (1196)
Q Consensus 877 gi~ 879 (1196)
|+.
T Consensus 277 Gi~ 279 (665)
T 2odr_A 277 GFT 279 (665)
T ss_dssp TCC
T ss_pred CCC
Confidence 863
|
| >2odr_D Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.011 Score=71.48 Aligned_cols=76 Identities=16% Similarity=0.254 Sum_probs=53.7
Q ss_pred eEeecCCCcHHHH---HHHHhCCCCceeEEEecCeeecCCC--CCCCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHc
Q 000993 802 LLELSHELRLPFI---RWAISNQKSSFKRYEISSVYRRAIG--HSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 876 (1196)
Q Consensus 802 ~laLRPD~T~~ia---R~~a~~~~~P~r~~Y~G~VfR~e~~--~~~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l 876 (1196)
..+||+.+++.+. |....++..|+|+|.+|+|||.+.. .....+|+|++.=+.|..-.. .++-.++..+++.|
T Consensus 199 ~sVLRTSLlPGLL~~vr~N~~R~~~pvRLFEIGrVFR~D~~lDath~~Ef~qLeGlv~G~~vDF--~DLKGvLE~LL~~L 276 (685)
T 2odr_D 199 KLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHLMTYHSASCAIAGEGVDI--NDGKAIAEGLLSQF 276 (685)
T ss_dssp SEEECCCTHHHHHHHHHHHTTTSCSCEEEEEEEEEECCCSCCCSSCCSEEEEEEEEEECTTCCH--HHHHHHHHHHHHTT
T ss_pred cCcccccchhhHHHHHHHHHhCCCCCeEEEEeccEEecCccccccCCCcceEEEEEEECCCCCH--HHHHHHHHHHHHHc
Confidence 5689999988544 4443344679999999999997542 223468999999999973222 35666677777777
Q ss_pred CCC
Q 000993 877 FHA 879 (1196)
Q Consensus 877 gi~ 879 (1196)
|+.
T Consensus 277 Gi~ 279 (685)
T 2odr_D 277 GFT 279 (685)
T ss_dssp TCC
T ss_pred CCC
Confidence 863
|
| >2odr_C Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.011 Score=71.37 Aligned_cols=76 Identities=16% Similarity=0.238 Sum_probs=53.7
Q ss_pred eEeecCCCcHHHHHHHHh---CCCCceeEEEecCeeecCCC--CCCCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHc
Q 000993 802 LLELSHELRLPFIRWAIS---NQKSSFKRYEISSVYRRAIG--HSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 876 (1196)
Q Consensus 802 ~laLRPD~T~~iaR~~a~---~~~~P~r~~Y~G~VfR~e~~--~~~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l 876 (1196)
..+||+.+++.+...+.. ++..|+|+|.+|+|||.+.. .....+|+|++.=+.|..-.. .++-.++..+++.|
T Consensus 199 ~sVLRTSLlPGLL~~vr~N~~R~~~pvRLFEIGrVFR~D~~lDath~~EfhqLeGlv~G~~vDF--~DLKGvLE~LL~~L 276 (701)
T 2odr_C 199 KLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHLMTYHSASCAIAGEGVDI--NDGKAIAEGLLSQF 276 (701)
T ss_dssp EEEECCCTHHHHHHHHHHHTTTSCSCEEEEEEEEEECCCSCCCSSCCSEEEEEEEEEECTTCCH--HHHHHHHHHHHHTT
T ss_pred cCcccccchhhHHHHHHHHHhCCCCCeEEEEEeeEEccCccccccCCCcceEEEEEEECCCCCH--HHHHHHHHHHHHHc
Confidence 568999998854443333 44679999999999997542 223468999999999973222 35666677777777
Q ss_pred CCC
Q 000993 877 FHA 879 (1196)
Q Consensus 877 gi~ 879 (1196)
|+.
T Consensus 277 Gi~ 279 (701)
T 2odr_C 277 GFT 279 (701)
T ss_dssp TCC
T ss_pred CCC
Confidence 763
|
| >4ah6_A Aspartate--tRNA ligase, mitochondrial; 3.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.016 Score=70.70 Aligned_cols=114 Identities=11% Similarity=0.141 Sum_probs=76.2
Q ss_pred hhHhhHHHHHHHHHHHH-HcCCccccccceeecCCCcccccceEEEe-ecCCceEeecCCCcHHHH--HHHHhCCCCcee
Q 000993 751 DTELRDYVVQVTKEMFR-QHCAKHLEIEPMYLLGDCPQFKRNTVKLL-THGGDLLELSHELRLPFI--RWAISNQKSSFK 826 (1196)
Q Consensus 751 ea~~~~~I~~~i~~~f~-~~Gy~~I~tP~~~~~~~~~~~~~~my~f~-D~~G~~laLRPD~T~~ia--R~~a~~~~~P~r 826 (1196)
..++|..+...+|+.|. ..||-+|+||++.-...+.. .. |.+. ...|..+.|+- .+++. +.++. .=-|
T Consensus 147 ~lr~Rs~i~~~iR~f~~~~~gF~EVeTPiL~~st~~GA--~~-F~v~~~~~g~~~~L~q--Spql~kq~l~v~---g~~r 218 (617)
T 4ah6_A 147 NLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGA--KE-FLVPSREPGKFYSLPQ--SPQQFKQLLMVG---GLDR 218 (617)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCEECCCCSSBCCCCSSS--CC-CEEECSSTTCEEECCS--STTHHHHHHHHT---SCSE
T ss_pred HHHHHHHHHHHHHHHHHhcCCeEEEeCCeeccCCCCCC--cC-ceeccccCCccccccc--CHHHHHHHHHhc---ccCc
Confidence 36788899999999996 79999999999843222221 12 3332 23477788874 23333 33332 2249
Q ss_pred EEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHc
Q 000993 827 RYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 876 (1196)
Q Consensus 827 ~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~l 876 (1196)
+|++|++||+|.....+. ||+|+++|.-+.+ --+++.++-+.+..+
T Consensus 219 vfqi~~~FR~E~~~t~r~pEFt~lE~e~af~d----~~d~m~~~E~l~~~~ 265 (617)
T 4ah6_A 219 YFQVARCYRDEGSRPDRQPEFTQIDIEMSFVD----QTGIQSLIEGLLQYS 265 (617)
T ss_dssp EEEEEEEECCCSSCSSSCSEEEEEEEEEESCC----HHHHHHHHHHHHHHH
T ss_pred EEEEEhheecccCCCCcCcceecceeeecCCC----HHHHHHHHHHHHHHH
Confidence 999999999987665444 7999999998753 234566665555554
|
| >3ica_A Phenylalanyl-tRNA synthetase beta chain; APC61692.1, phenylalanyl-tRNA SYNT beta subunit, structural genomics, PSI-2; HET: TAM; 2.44A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.011 Score=62.92 Aligned_cols=125 Identities=14% Similarity=0.020 Sum_probs=87.2
Q ss_pred hHHHHHHHHHHHHHcCCccccccceeecCC----CcccccceEEEeecCC-ceEeecCCCcHHHHHHHHhCC---CCcee
Q 000993 755 RDYVVQVTKEMFRQHCAKHLEIEPMYLLGD----CPQFKRNTVKLLTHGG-DLLELSHELRLPFIRWAISNQ---KSSFK 826 (1196)
Q Consensus 755 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~----~~~~~~~my~f~D~~G-~~laLRPD~T~~iaR~~a~~~---~~P~r 826 (1196)
.+.+++.+++.+...||.||.|-+|.-... .....+...++.++-. +.-+||+.+.+.+.+.++.|. ..++|
T Consensus 6 ~~~~~~~ir~~L~~~G~~Evitysf~s~~~~~~~~~~~~~~~v~l~NPls~e~~vmRtsLlpgLL~~~~~N~~r~~~~~~ 85 (213)
T 3ica_A 6 RYKWQTVVSEQLVGAGFNEILNNSLTAGSYYEGLKSHPREMAVELMNPLSQELNCMRQTLLFGGLETLSHNLRRKHLSLY 85 (213)
T ss_dssp HHHHHHHHHHHHHHTTCEECCCCSEEEGGGGTTCSSSCGGGCCBCSSBSCSSEEEECSSSHHHHHHHHHHHHTTTCSEEE
T ss_pred HHHHHHHHHHHHHHCCCceeeeccCCCHHHHhhhcccCcCCeEEecCCccHHHHHHHHHhHHHHHHHHHHHHcCCCCCee
Confidence 457888999999999999999999832211 1111234566777765 455899999999999888742 23699
Q ss_pred EEEecCeeecCCCC-------CCCcceeEeEEEEeCCC--------CccchH-HHHHHHHHHHHHcCCC
Q 000993 827 RYEISSVYRRAIGH-------SPPNRYLQGDFDIIGGA--------SALTEA-EVLKVTMDIVTRFFHA 879 (1196)
Q Consensus 827 ~~Y~G~VfR~e~~~-------~~~~ef~Q~GvEiiG~~--------~~~aDa-EvI~la~~~L~~lgi~ 879 (1196)
+|.+|+||+.+... ....|..++++=+.|.. ....|. ++-.++..++..+|+.
T Consensus 86 lFEiG~Vf~~~~~~~~~~~~~~~~~e~~~la~~~~G~~~~~~w~~~~~~~df~d~Kg~ve~ll~~lgi~ 154 (213)
T 3ica_A 86 LFEWGKCYRFHAAKRTDETPLAAYAEDDRLGIWICGQRVHNSWAHPEEPTSVFELKAVVEQVLCRVGIE 154 (213)
T ss_dssp EEEEEEEEEEECCCC--CCSSCEEEEEEEEEEEEEEBCCC-----CCCBCCHHHHHHHHHHHHHHTTCC
T ss_pred EEEeeeEEecCCccccccccccccchhhEEEEEEeCCCCcccCCCCCCCcCHHHHHHHHHHHHHHhCCC
Confidence 99999999974311 22356777877777742 234554 6666777778888886
|
| >3i7f_A Aspartyl-tRNA synthetase; tRNA ligase, APO, ATP-binding, aminoacyl-tRNA synthetase, LI nucleotide-binding, protein biosynthesis; 2.80A {Entamoeba histolytica} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0097 Score=71.62 Aligned_cols=97 Identities=9% Similarity=0.049 Sum_probs=60.6
Q ss_pred hhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEeecCCceEeecCCCcHHHH--HHHHhCCCCceeEE
Q 000993 751 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI--RWAISNQKSSFKRY 828 (1196)
Q Consensus 751 ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia--R~~a~~~~~P~r~~ 828 (1196)
-.+++..+...+++.|...||-+|+||++.-... + -..+.|.+ +.-|+.+.|+- .+++. |.++ ..--|+|
T Consensus 243 ~~r~Rs~i~~~iR~ff~~~gF~EVeTPiL~~~~~-e-gga~~F~v-~~~~~~~yL~~--Spql~~k~ll~---~g~~rVf 314 (548)
T 3i7f_A 243 IFRIQSACCGLFREFLTSQKFVEIHTPKLIGCSS-E-GGSNIFEV-KYFDRKAYLAQ--SPQLYKQMAIM---GDFRKVF 314 (548)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSBC----------------------CCBCS--CTHHHHHHHHT---TTCCEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEeCCEEecccC-C-CCcceeEE-ecCCCceEecc--CHHHHHHHHHh---cCcCcEE
Confidence 4678889999999999999999999999833322 1 11234432 22345567774 33444 4443 2345999
Q ss_pred EecCeeecCCCCCCC--cceeEeEEEE-eC
Q 000993 829 EISSVYRRAIGHSPP--NRYLQGDFDI-IG 855 (1196)
Q Consensus 829 Y~G~VfR~e~~~~~~--~ef~Q~GvEi-iG 855 (1196)
++|++||+|.....| -||+|+++|. |+
T Consensus 315 eI~~~FR~E~~~t~RHl~EFtmlE~e~af~ 344 (548)
T 3i7f_A 315 EVGPVFRAENSNTRRHLTEFEGLDIEMEIV 344 (548)
T ss_dssp EEEEECCCSCCCSSSCCSCEEEEEEEEECS
T ss_pred EEeeeEecCCCCCCCcchhhhchhhhhhhh
Confidence 999999998765433 3899999996 44
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.026 Score=62.96 Aligned_cols=29 Identities=21% Similarity=0.252 Sum_probs=24.9
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKF 568 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~ 568 (1196)
.++|+|+.|.||+ ..++.+.|+||..+..
T Consensus 174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 174 AACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 3799999999999 5667889999998863
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=96.05 E-value=0.034 Score=62.81 Aligned_cols=57 Identities=18% Similarity=0.123 Sum_probs=42.0
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC---CCCeeeeeee
Q 000993 385 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ---HQHVVRYYQA 448 (1196)
Q Consensus 385 ~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~---HpnIV~l~~~ 448 (1196)
-.+.|+.|.+..+|+... ++..+++|+.... ....+.+|+..|+.|. ...+++++..
T Consensus 40 ~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~ 99 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND--EVQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGI 99 (312)
T ss_dssp EEEEECCSSSSEEEEEES--SSCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEE
T ss_pred eeEEeCCccceeeeEEEE--CCCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEE
Confidence 357899999999999875 4778999986532 2456889999998883 2456666654
|
| >3l4g_B Phenylalanyl-tRNA synthetase beta chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.87 E-value=0.03 Score=68.78 Aligned_cols=121 Identities=9% Similarity=0.007 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHcCCccccccceeec----CC-C-cccccceEEEeecCC-ceEeecCCCcHHHHHHHHhCCC--Ccee
Q 000993 756 DYVVQVTKEMFRQHCAKHLEIEPMYLL----GD-C-PQFKRNTVKLLTHGG-DLLELSHELRLPFIRWAISNQK--SSFK 826 (1196)
Q Consensus 756 ~~I~~~i~~~f~~~Gy~~I~tP~~~~~----~~-~-~~~~~~my~f~D~~G-~~laLRPD~T~~iaR~~a~~~~--~P~r 826 (1196)
+.+.+.+++++...||.|+.|+.|.-. .. + .......+++.++-. +.-+||+.+.+.+.+.++.|.. .|+|
T Consensus 394 ~~~~~~ir~~l~~~Gf~Evitysf~s~~~~~~~l~~~~~~~~~v~L~NPis~e~svmRtsLlpgLL~~l~~N~~~~~~vr 473 (589)
T 3l4g_B 394 NKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLK 473 (589)
T ss_dssp HHHHHHHHHHHHHTTCEECCCCSEECHHHHTGGGTSCTTSSCCCBBSSCSSGGGSEECSCSHHHHHHHHHHTTTSCSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEecCcccCHHHHHHHhCCCCCCCCeEEEcCCCchhHhHHHHHHHHHHHHHHHHHhcCCCceE
Confidence 456788999999999999999999211 11 1 111134566777665 3458999999999999987643 4999
Q ss_pred EEEecCeeecCCC-CCCCcceeEeEEEEeCCCCccchHH-HHHHHHHHHHHcCCC
Q 000993 827 RYEISSVYRRAIG-HSPPNRYLQGDFDIIGGASALTEAE-VLKVTMDIVTRFFHA 879 (1196)
Q Consensus 827 ~~Y~G~VfR~e~~-~~~~~ef~Q~GvEiiG~~~~~aDaE-vI~la~~~L~~lgi~ 879 (1196)
+|.+|+|||.+.. ..+.+++.|+++=+.|... |.+ +=.++..+++.+|++
T Consensus 474 lFEiG~Vf~~d~~~~~~~~e~~~la~~~~g~~~---~f~~lkg~le~ll~~lg~~ 525 (589)
T 3l4g_B 474 LFEISDIVIKDSNTDVGAKNYRHLCAVYYNKNP---GFEIIHGLLDRIMQLLDVP 525 (589)
T ss_dssp EEEEEEEEEECTTSTTSEEEEEEEEEEEESSSC---CHHHHHHHHHHHHHHTTCC
T ss_pred EEEeeeEEecCCccccCCccccEEEEEEECCCC---CHHHHHHHHHHHHHHcCCC
Confidence 9999999997432 2234578899988888542 222 223333445555553
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=95.66 E-value=0.022 Score=64.48 Aligned_cols=31 Identities=26% Similarity=0.443 Sum_probs=27.0
Q ss_pred CCCcccCCCcCcEEecCC----CCeEEeccCcchh
Q 000993 538 QGIIHRDLTPNNIFFDAR----NDIKIGDFGLAKF 568 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~----~~vKL~DFGlA~~ 568 (1196)
..++|+|+.+.|||++.+ +.+.|+||+.+..
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 469999999999999875 6789999998864
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=95.50 E-value=0.13 Score=56.96 Aligned_cols=54 Identities=19% Similarity=0.172 Sum_probs=40.6
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 438 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~ 438 (1196)
+..-++.+|.|..+.||++... +|+.|++|+-..... .....+..|+..|+.|.
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~~--~~~~~~~~Ea~~L~~L~ 69 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAP--ALDGLFRAEALGLDWLG 69 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCC--CCTTHHHHHHHHHHHHT
T ss_pred CeEEEEecCCCCCeEEEEEEEC-CCCEEEEEEeCCCCc--chhhHHHHHHHHHHHHH
Confidence 3455788999999999999875 899999997653322 22345778999999884
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=95.41 E-value=0.047 Score=64.47 Aligned_cols=61 Identities=11% Similarity=0.264 Sum_probs=40.6
Q ss_pred EEeeeccCCcEEEEEEEEcc-------CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCe-eeeeeee
Q 000993 385 ELQPLGHGGFGHVVLCKNKL-------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV-VRYYQAW 449 (1196)
Q Consensus 385 ~~~~LG~G~fG~Vy~a~~~~-------~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnI-V~l~~~~ 449 (1196)
.++.|+.|-...||++.... ++..+++|+.... .. ...+.+|..+++.+...++ .++++.+
T Consensus 77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~---~~~li~E~~~l~~L~~~g~~P~l~~~~ 145 (429)
T 1nw1_A 77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ET---ESHLVAESVIFTLLSERHLGPKLYGIF 145 (429)
T ss_dssp EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CC---HHHHHHHHHHHHHHHHTTSSSCEEEEE
T ss_pred EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-Cc---HHHHHHHHHHHHHHHhCCCCCcEEEEe
Confidence 35678889999999998752 2578999987321 11 1455689999988843333 4555543
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=95.32 E-value=0.087 Score=59.22 Aligned_cols=47 Identities=28% Similarity=0.293 Sum_probs=32.3
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC
Q 000993 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 438 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~ 438 (1196)
..|+ |....||++... +|+.+++|..+.... ....+..|+.+++.+.
T Consensus 32 ~~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~~~---~~~~~~~E~~~~~~L~ 78 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDE-DRRRFVVKFYRPERW---TADQILEEHQFALQLV 78 (328)
T ss_dssp EEEC-CSSSEEEEECCT-TCCCEEEEEECTTTS---CHHHHHHHHHHHHHHH
T ss_pred Eeec-CcccceEEEEcC-CCCEEEEEEcCCCCC---CHHHHHHHHHHHHHHH
Confidence 4566 788899987653 566799998863222 2345677888888874
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=95.23 E-value=0.048 Score=61.22 Aligned_cols=41 Identities=29% Similarity=0.379 Sum_probs=31.1
Q ss_pred HHHHHHHHHh-------CCCcccCCCcCcEEecCCCCeEEeccCcchh
Q 000993 528 IVEGLAHIHG-------QGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 568 (1196)
Q Consensus 528 Ia~gL~yLHs-------~gIiHrDLKp~NILld~~~~vKL~DFGlA~~ 568 (1196)
+...+++++. .+++|+|+++.|||++.++.+.|+||+.+..
T Consensus 170 l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 170 IRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp HHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 3444555552 3689999999999998776568999998853
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=95.01 E-value=0.057 Score=62.63 Aligned_cols=60 Identities=15% Similarity=0.153 Sum_probs=33.8
Q ss_pred eeeccCCcEEEEEEEEcc-------CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeee
Q 000993 387 QPLGHGGFGHVVLCKNKL-------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAW 449 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~-------~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~ 449 (1196)
+.|..|-...+|++.... +++.|++|+... . ......+.+|..+++.+. +.-..++++.+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~--~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~ 123 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA--I-LQGVDSLVLESVMFAILAERSLGPQLYGVF 123 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC--c-cchHHHHHHHHHHHHHHHhcCCCCeEEEEc
Confidence 567778888899988642 357899997522 1 122455678999998884 32234555443
|
| >2rhq_B Phenylalanyl-tRNA synthetase beta chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_B* | Back alignment and structure |
|---|
Probab=94.74 E-value=0.13 Score=65.33 Aligned_cols=103 Identities=16% Similarity=0.096 Sum_probs=74.5
Q ss_pred hHHHHHHHHHHHHHcCCccccccceeecCCCcc--cccc-eEEEeecCC-ceEeecCCCcHHHHHHHHhC---CCCceeE
Q 000993 755 RDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQ--FKRN-TVKLLTHGG-DLLELSHELRLPFIRWAISN---QKSSFKR 827 (1196)
Q Consensus 755 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~--~~~~-my~f~D~~G-~~laLRPD~T~~iaR~~a~~---~~~P~r~ 827 (1196)
.+.+.+.+++.+...||.|+.|..|.-...... .... .+++.++-. +.-+||+.+.+...+.++.| +..|+|+
T Consensus 495 ~~~~~~~ir~~L~~~Gf~Evitysfvs~~~~~~l~~~~~~~v~L~NPis~e~svLRtsLlpgLL~~l~~N~~r~~~~vrl 574 (795)
T 2rhq_B 495 RQHKTRTLKETLEGAGLNQAITYSLVSKDHAKDFALQERPTISLLMPMSEAHATLRQSLLPHLIEATAYNVARKNKDVRL 574 (795)
T ss_dssp HHHHHHHHHHHHHHTTCEECCCCSEECTTTTTTTCSSCCCCEECSSCSCTTSSEECSCSHHHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEecCCccCHHHHHhhCCCCCceEEEcCCCchhhhhhhhccHHHHHHHHHHHhcCCCCCeEE
Confidence 456788899999999999999999832211110 1233 467777654 45589999999999988875 3569999
Q ss_pred EEecCeeecCCCCCCCcceeEeEEEEeCCC
Q 000993 828 YEISSVYRRAIGHSPPNRYLQGDFDIIGGA 857 (1196)
Q Consensus 828 ~Y~G~VfR~e~~~~~~~ef~Q~GvEiiG~~ 857 (1196)
|.+|+|||.+.......++.|+++=+.|..
T Consensus 575 FEiG~Vf~~d~~~~~~~e~~~la~l~~G~~ 604 (795)
T 2rhq_B 575 YEIGRVFFGNGEGELPDEVEYLSGILTGEY 604 (795)
T ss_dssp EEEEEEEECCCTTSCCEEEEEEEEEEESEE
T ss_pred EEEeeEEecCCcccCcchhhEEEEEEEecc
Confidence 999999996322101267999999888853
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=94.57 E-value=0.06 Score=61.87 Aligned_cols=28 Identities=29% Similarity=0.429 Sum_probs=24.1
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcch
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAK 567 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~ 567 (1196)
.++|+|+++.|||++.++ +.|+||..|.
T Consensus 213 ~l~HgDl~~~Nil~~~~~-~~lID~e~a~ 240 (369)
T 3c5i_A 213 VFCHNDLQENNIINTNKC-LRLIDFEYSG 240 (369)
T ss_dssp EEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred EEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence 589999999999997654 8999999875
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=94.21 E-value=0.26 Score=58.60 Aligned_cols=62 Identities=16% Similarity=0.178 Sum_probs=38.8
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCe-eeeeeee
Q 000993 385 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV-VRYYQAW 449 (1196)
Q Consensus 385 ~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnI-V~l~~~~ 449 (1196)
.++.|+.|-...+|++.....+..+++|+....... . -...+|..+++.|...++ .++++.+
T Consensus 112 ~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~--~-idR~~E~~vl~~L~~~gl~P~ll~~~ 174 (458)
T 2qg7_A 112 EFQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE--I-INREREKKISCILYNKNIAKKIYVFF 174 (458)
T ss_dssp EEEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS--C-SCHHHHHHHHHHHTTSSSBCCEEEEE
T ss_pred EEEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh--h-cCHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 356788899999999987643578999986432111 1 112579999998865554 4555544
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=94.08 E-value=0.25 Score=56.17 Aligned_cols=31 Identities=19% Similarity=0.312 Sum_probs=27.6
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchh
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 568 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~ 568 (1196)
..++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 3589999999999999888899999988764
|
| >1b7y_B Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: a.6.1.1 a.6.1.1 b.40.4.4 b.153.1.1 d.58.13.1 d.104.1.1 PDB: 1b70_B* 1eiy_B 1jjc_B* 1pys_B 2akw_B* 2aly_B* 2amc_B* 3hfz_B* 3teh_B* 2iy5_B* | Back alignment and structure |
|---|
Probab=93.87 E-value=0.18 Score=63.62 Aligned_cols=116 Identities=12% Similarity=0.004 Sum_probs=82.6
Q ss_pred hHHHHHHHHHHHHHcCCccccccceeecC---CCcccccceEEEeecCC-ceEeecCCCcHHHHHHHHhC---C-CCcee
Q 000993 755 RDYVVQVTKEMFRQHCAKHLEIEPMYLLG---DCPQFKRNTVKLLTHGG-DLLELSHELRLPFIRWAISN---Q-KSSFK 826 (1196)
Q Consensus 755 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~---~~~~~~~~my~f~D~~G-~~laLRPD~T~~iaR~~a~~---~-~~P~r 826 (1196)
.+.+.+.+++.+...||.|+.|-.|.-.. .... ....+++.++-. +.-+||+.+.+.+.+.++.| + ..|+|
T Consensus 491 ~~~~~~~ir~~L~~~Gf~Evitysfvs~~~~~~l~~-~~~~v~L~NPis~d~svLRtsLlpgLL~~l~~N~~r~~~~~vr 569 (785)
T 1b7y_B 491 PYRKEQRLREVLSGLGFQEVYTYSFMDPEDARRFRL-DPPRLLLLNPLAPEKAALRTHLFPGLVRVLKENLDLDRPERAL 569 (785)
T ss_dssp HHHHHHHHHHHHHHHTCEECCCCSEECTTHHHHTTC-CCCSCEESSCSSTTSSEECSCSHHHHHHHHHHHHHHSCCSCEE
T ss_pred HHHHHHHHHHHHHHCCCEEEecCcccCHHHHHhcCC-CCCeEEEcCCCchhhhhhhhhhHHHHHHHHHHHhhcCCCCCeE
Confidence 45678889999999999999999982221 1110 133466776654 44489999999999988875 3 57999
Q ss_pred EEEecCeeecCCCCCCCcceeEeEEEEeCCCCc-------cchH-HHHHHHHHHHHHcCC
Q 000993 827 RYEISSVYRRAIGHSPPNRYLQGDFDIIGGASA-------LTEA-EVLKVTMDIVTRFFH 878 (1196)
Q Consensus 827 ~~Y~G~VfR~e~~~~~~~ef~Q~GvEiiG~~~~-------~aDa-EvI~la~~~L~~lgi 878 (1196)
+|.+|+||| + .++.|+++=+.|.... ..|. ++-.++..+|..||+
T Consensus 570 lFEiG~Vf~-~------~e~~~lagl~~G~~~~~~w~~~~~vdf~dlKg~le~ll~~lgi 622 (785)
T 1b7y_B 570 LFEVGRVFR-E------REETHLAGLLFGEGVGLPWAKERLSGYFLLKGYLEALFARLGL 622 (785)
T ss_dssp EEEEEEEES-S------SEEEEEEEEEESSCBSCSSSSCCBCSHHHHHHHHHHHHHHHTC
T ss_pred EEEEeeeec-c------ChhhEEEEEEECCCcccccCccCCcCHHHHHHHHHHHHHHcCC
Confidence 999999999 2 6799999999996421 2343 445555555666665
|
| >3cmq_A Phenylalanyl-tRNA synthetase, mitochondrial; classii aarss fold, RRM domain, RNA recogntion, aminoacyl-tRNA synthetase, ATP-binding, ligase; HET: FA5; 2.20A {Homo sapiens} PDB: 3hfv_A* 3teg_A* 3tup_A | Back alignment and structure |
|---|
Probab=89.39 E-value=1.3 Score=51.75 Aligned_cols=92 Identities=13% Similarity=0.029 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHc--------CCccccc-cce-----eec--CC-Cccc---ccceEEEeecCCceEeecCCCcHHHHH
Q 000993 756 DYVVQVTKEMFRQH--------CAKHLEI-EPM-----YLL--GD-CPQF---KRNTVKLLTHGGDLLELSHELRLPFIR 815 (1196)
Q Consensus 756 ~~I~~~i~~~f~~~--------Gy~~I~t-P~~-----~~~--~~-~~~~---~~~my~f~D~~G~~laLRPD~T~~iaR 815 (1196)
..+.+.++++|... ||+++.+ |.+ .|. +- .+.. ....|.+ + +..+||...|+..+|
T Consensus 51 ~~~~~~i~~~f~~~~~~~~g~~Gf~e~~~~~~v~s~~~NFd~L~~p~dHpaR~~~Dtfyi-~---~~~vLRThts~~~~~ 126 (415)
T 3cmq_A 51 WLIKERVKEHFYKQYVGRFGTPLFSVYDNLSPVVTTWQNFDSLLIPADHPSRKKGDNYYL-N---RTHMLRAHTSAHQWD 126 (415)
T ss_dssp HHHHHHHHHHHHHHHHHCSSSCCCEEECCCCSEEEHHHHTGGGTCCTTCGGGCGGGSCBS-S---SSEEECSSGGGGHHH
T ss_pred HHHHHHHHHHHHhhhccccCCCCcEEEcCCCccccHHHHHHHhCCCCCCCcccccceEEe-c---CCeEEcCCCcHHHHH
Confidence 45666666676655 9999998 666 111 11 1111 1333433 2 457999999999999
Q ss_pred HHHhCCCCceeEEEecCeeecCC-CCCCCcceeEeE-EEEe
Q 000993 816 WAISNQKSSFKRYEISSVYRRAI-GHSPPNRYLQGD-FDII 854 (1196)
Q Consensus 816 ~~a~~~~~P~r~~Y~G~VfR~e~-~~~~~~ef~Q~G-vEii 854 (1196)
.+..+ .| |++.+|.|||++. ....+..|+|.. +-+|
T Consensus 127 ~l~~~--~~-k~~~~G~VyR~D~~da~h~n~fhQ~egv~lf 164 (415)
T 3cmq_A 127 LLHAG--LD-AFLVVGDVYRRDQIDSQHYPIFHQLEAVRLF 164 (415)
T ss_dssp HHHTT--CS-EEEEEEEEECCCCCBTTBCSEEEEEEEEEEE
T ss_pred HHHHC--CC-CEEEeeeEEeccchhhhhhHHhcCCCcEEEE
Confidence 98764 35 9999999999964 344555777765 5554
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=88.41 E-value=0.52 Score=55.35 Aligned_cols=29 Identities=28% Similarity=0.555 Sum_probs=25.9
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKF 568 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~ 568 (1196)
.++|+|+.+.||+ +.++.+.|+||..|..
T Consensus 263 ~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 263 VFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 4899999999999 7788999999998863
|
| >3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A* | Back alignment and structure |
|---|
Probab=85.86 E-value=2.2 Score=49.53 Aligned_cols=29 Identities=21% Similarity=0.488 Sum_probs=24.8
Q ss_pred CcccCCCcCcEEe------cCCCCeEEeccCcchh
Q 000993 540 IIHRDLTPNNIFF------DARNDIKIGDFGLAKF 568 (1196)
Q Consensus 540 IiHrDLKp~NILl------d~~~~vKL~DFGlA~~ 568 (1196)
++|+|+.+.|||+ +.+..++++||-+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 6899999999999 3456799999998863
|
| >3pco_B Phenylalanyl-tRNA synthetase, beta chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix aminoacyl-tRNA synthetase, ATP-binding; HET: PHE AMP; 3.02A {Escherichia coli} | Back alignment and structure |
|---|
Probab=82.42 E-value=2.3 Score=53.82 Aligned_cols=119 Identities=8% Similarity=-0.076 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHcCCccccccceeecC---C-CcccccceEEEeecCCce-EeecCCCcHHHHHHHHhCC---CCceeEEE
Q 000993 758 VVQVTKEMFRQHCAKHLEIEPMYLLG---D-CPQFKRNTVKLLTHGGDL-LELSHELRLPFIRWAISNQ---KSSFKRYE 829 (1196)
Q Consensus 758 I~~~i~~~f~~~Gy~~I~tP~~~~~~---~-~~~~~~~my~f~D~~G~~-laLRPD~T~~iaR~~a~~~---~~P~r~~Y 829 (1196)
..+.+++.+...||.|+.|-+|.-.. . + ..+...++.++-..+ =+||+.+-+.+...++.|. ..++|+|.
T Consensus 494 ~~~~~r~~l~~~G~~Evitysf~~~~~~~~~~--~~~~~v~l~NPis~e~svmRtsLlpgLL~~~~~N~~r~~~~v~lFE 571 (795)
T 3pco_B 494 SLKRVKTLLNDKGYQEVITYSFVDPKVQQMIH--PGVEALLLPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFE 571 (795)
T ss_dssp CHHHHHHHHHHTTCEECCCCSEECHHHHHHHS--SSCCCCBCSSCSCSTTCEECSSSHHHHHHHHHHHHTSSCCCCEEEE
T ss_pred HHHHHHHHHHHCCCeeeeccCcCCHHHHHhhC--CCCCeEEEcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCccEEE
Confidence 45678888899999999999982111 1 1 123445666766544 4799999999999888753 34799999
Q ss_pred ecCeeecCCC-CCCCcceeEeEEEEeCCCC--------ccchH-HHHHHHHHHHHHcCC
Q 000993 830 ISSVYRRAIG-HSPPNRYLQGDFDIIGGAS--------ALTEA-EVLKVTMDIVTRFFH 878 (1196)
Q Consensus 830 ~G~VfR~e~~-~~~~~ef~Q~GvEiiG~~~--------~~aDa-EvI~la~~~L~~lgi 878 (1196)
+|+||+.+.. ..+..|...+++=+.|... ...|. ++-.++..+|..||+
T Consensus 572 iG~Vf~~~~~~~~~~~e~~~la~~~~G~~~~~~w~~~~~~~dF~dlKg~ve~ll~~lg~ 630 (795)
T 3pco_B 572 SGLRFVPDTQAPLGIRQDLMLAGVICGNRYEEHWNLAKETVDFYDLKGDLESVLDLTGK 630 (795)
T ss_dssp EEEEEEECTTSSTTEEEEEEEEEEEESBSSCSCSSSCCCBCCHHHHHHHHHHHTTTSSC
T ss_pred eeeEEecCCCcccCcchhheEEEEEECCCcccccccCCCCCCHHHHHHHHHHHHHHcCC
Confidence 9999987432 2234567777777777532 23454 444455555666665
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1196 | ||||
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 1e-58 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 1e-55 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 4e-55 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 1e-54 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 5e-53 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 4e-52 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 1e-51 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 2e-51 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 4e-51 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 7e-51 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 9e-50 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 2e-49 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 2e-49 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 6e-49 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 2e-48 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 5e-48 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 6e-48 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 3e-46 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 3e-46 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 6e-46 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 9e-46 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 1e-45 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 1e-44 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 1e-44 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 3e-44 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 5e-44 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 5e-44 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 5e-44 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 7e-44 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 8e-44 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 9e-44 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 1e-43 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 2e-43 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 5e-43 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 7e-43 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 8e-43 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 1e-42 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 2e-42 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 3e-42 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 7e-42 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 8e-42 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 8e-42 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 9e-42 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 9e-42 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 1e-41 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 6e-41 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 7e-41 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 2e-40 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 2e-39 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 5e-39 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 7e-39 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 1e-38 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 2e-38 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 2e-38 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 4e-38 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 2e-37 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 1e-36 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 3e-36 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 2e-34 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 1e-33 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 3e-33 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 8e-25 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 3e-14 | |
| d1usya_ | 275 | d.104.1.1 (A:) ATP phosphoribosyltransferase regul | 2e-10 | |
| d1ukxa_ | 137 | d.20.1.3 (A:) EIF2-alpha kinase 4 (GCN2-like prote | 1e-09 | |
| d2daya1 | 115 | d.20.1.3 (A:8-122) E3 ubiquitin-protein ligase RNF | 4e-09 | |
| d1h4vb2 | 324 | d.104.1.1 (B:2-325) Histidyl-tRNA synthetase (HisR | 4e-08 | |
| d1wu7a2 | 327 | d.104.1.1 (A:3-329) Histidyl-tRNA synthetase (HisR | 7e-08 | |
| d2vgla_ | 584 | a.118.1.10 (A:) Adaptin alpha C subunit N-terminal | 1e-07 | |
| d1qe0a2 | 325 | d.104.1.1 (A:1-325) Histidyl-tRNA synthetase (HisR | 1e-05 | |
| d1kmma2 | 322 | d.104.1.1 (A:4-325) Histidyl-tRNA synthetase (HisR | 4e-05 | |
| d2daxa1 | 140 | d.20.1.3 (A:8-147) Uncharacterized protein C21orf6 | 2e-04 | |
| d1z7ma1 | 318 | d.104.1.1 (A:6-323) ATP phosphoribosyltransferase | 2e-04 | |
| d2dawa1 | 141 | d.20.1.3 (A:8-148) RWD domain-containing protein 2 | 8e-04 |
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 201 bits (511), Expect = 1e-58
Identities = 72/312 (23%), Positives = 124/312 (39%), Gaps = 58/312 (18%)
Query: 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 438
++ D++ +Q LG G +G V L N++ AVK + +++ + I +E+ L
Sbjct: 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEICINKMLN 61
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
H++VV++Y E Y+
Sbjct: 62 HENVVKFYGHRRE----------------------------------------GNIQYLF 81
Query: 499 MEYCPRTL-RQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
+EYC E + A F Q++ G+ ++HG GI HRD+ P N+ D R++
Sbjct: 82 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN 141
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617
+KI DFGLA + ++ GT Y APE+ + E D
Sbjct: 142 LKISDFGLATVFRYNNRERLL-------------NKMCGTLPYVAPELLKRREFHAEPVD 188
Query: 618 MYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 674
++S GIV + P+ + SD K+K W S +LL +++ +P
Sbjct: 189 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENP 248
Query: 675 SDRPSATELLQD 686
S R + ++ +D
Sbjct: 249 SARITIPDIKKD 260
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 192 bits (488), Expect = 1e-55
Identities = 71/312 (22%), Positives = 123/312 (39%), Gaps = 66/312 (21%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQ 438
L DFE +PLG G FG+V L + K A+K + + V ++ REV S L+
Sbjct: 5 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 64
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
H +++R Y + + +T +Y+
Sbjct: 65 HPNILRLYGYFHD----------------------------------------ATRVYLI 84
Query: 499 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 85 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 144
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617
+KI DFG + + GT Y PE+ +G DEK D
Sbjct: 145 LKIADFGWSVHAPSSRRTT-----------------LCGTLDYLPPEMIEGRM-HDEKVD 186
Query: 618 MYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 674
++SLG++ +E PF ++ + + P L+ RL+ +P
Sbjct: 187 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA---RDLISRLLKHNP 243
Query: 675 SDRPSATELLQD 686
S RP E+L+
Sbjct: 244 SQRPMLREVLEH 255
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 192 bits (489), Expect = 4e-55
Identities = 74/354 (20%), Positives = 127/354 (35%), Gaps = 75/354 (21%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN-DRILREVATLSRLQHQH 441
F +L+ +GHG FG V ++ + A+KK+ K I++EV L +L+H +
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
++Y + ++ MEY
Sbjct: 77 TIQYRGCYLREH----------------------------------------TAWLVMEY 96
Query: 502 CPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 560
C + + E + + + ++GLA++H +IHRD+ NI +K+
Sbjct: 97 CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKL 156
Query: 561 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP--KIDEKADM 618
GDFG A + VGT ++ APE+ + D K D+
Sbjct: 157 GDFGSASIMA-------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDV 197
Query: 619 YSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSP 674
+SLGI EL P + + E P +SE + + + P
Sbjct: 198 WSLGITCIELAERKPPLFNMNAMSAL--YHIAQNESPALQSGHWSEYFRNFVDSCLQKIP 255
Query: 675 SDRPSATELLQD-----ALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDE 723
DRP++ LL+ PP + +L+ + D Y K+ +F E
Sbjct: 256 QDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVR-ELDNLQYRKMKKILFQE 308
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 189 bits (481), Expect = 1e-54
Identities = 74/318 (23%), Positives = 129/318 (40%), Gaps = 69/318 (21%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
D+E L +G G +G + K DG+ K++ + ++ EV L L+H +
Sbjct: 5 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 64
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
+VRYY + +T LYI MEY
Sbjct: 65 IVRYYDRIIDR--------------------------------------TNTTLYIVMEY 86
Query: 502 CPRT-----LRQVFESYDHFDKELAWHLFRQIVEGLAHIH-----GQGIIHRDLTPNNIF 551
C + + + + D+E + Q+ L H G ++HRDL P N+F
Sbjct: 87 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVF 146
Query: 552 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611
D + ++K+GDFGLA+ L + + VGT +Y +PE
Sbjct: 147 LDGKQNVKLGDFGLARILNHD---------------TSFAKAFVGTPYYMSPEQMNRMS- 190
Query: 612 IDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRR 668
+EK+D++SLG + +EL PF+ ++++ + K P + E ++ R
Sbjct: 191 YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSD--ELNEIITR 248
Query: 669 LMSPSPSDRPSATELLQD 686
+++ RPS E+L++
Sbjct: 249 MLNLKDYHRPSVEEILEN 266
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 184 bits (469), Expect = 5e-53
Identities = 65/320 (20%), Positives = 112/320 (35%), Gaps = 67/320 (20%)
Query: 375 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATL 434
R+L F+ +G G F V + A +++ + + R E L
Sbjct: 6 NDGRFL-KFDIE--IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEML 62
Query: 435 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 494
LQH ++VR+Y +W T
Sbjct: 63 KGLQHPNIVRFYDSWESTVKGK------------------------------------KC 86
Query: 495 LYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH--GQGIIHRDLTPNNIF 551
+ + E TL+ + + ++ RQI++GL +H IIHRDL +NIF
Sbjct: 87 IVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIF 146
Query: 552 FDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610
+KIGD GLA + +GT + APE+ +
Sbjct: 147 ITGPTGSVKIGDLGLATLKRASFA-----------------KAVIGTPEFMAPEMYEE-- 187
Query: 611 KIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLL 666
K DE D+Y+ G+ E+ +P+S + + G P S+ + + ++
Sbjct: 188 KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVT-SGVKPASFDKVAIPEVKEII 246
Query: 667 RRLMSPSPSDRPSATELLQD 686
+ + +R S +LL
Sbjct: 247 EGCIRQNKDERYSIKDLLNH 266
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 182 bits (464), Expect = 4e-52
Identities = 61/316 (19%), Positives = 110/316 (34%), Gaps = 67/316 (21%)
Query: 375 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATL 434
P +Y + +G G G V + G+ A++++ L+ + P + I+ E+ +
Sbjct: 18 PKKKY----TRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVM 71
Query: 435 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 494
++ ++V Y ++
Sbjct: 72 RENKNPNIVNYLDSYLVGD----------------------------------------E 91
Query: 495 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 554
L++ MEY + D+ + R+ ++ L +H +IHRD+ +NI
Sbjct: 92 LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM 151
Query: 555 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614
+K+ DFG + EQ + + VGT ++ APE+
Sbjct: 152 DGSVKLTDFGFCAQITPEQSKR---------------STMVGTPYWMAPEVVTRKA-YGP 195
Query: 615 KADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLM 670
K D++SLGI+ E+ P+ + L + G K S L R +
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLIATNGTPELQNPEKLSAIFRDFLNRCL 254
Query: 671 SPSPSDRPSATELLQD 686
R SA ELLQ
Sbjct: 255 DMDVEKRGSAKELLQH 270
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 183 bits (466), Expect = 1e-51
Identities = 63/323 (19%), Positives = 125/323 (38%), Gaps = 67/323 (20%)
Query: 372 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREV 431
+ + L+ ++ + LG G FG V + G ++A K + +S + + +E+
Sbjct: 17 VEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK--ETVRKEI 74
Query: 432 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 491
T+S L+H +V + A+ +
Sbjct: 75 QTMSVLRHPTLVNLHDAFEDDN-------------------------------------- 96
Query: 492 STYLYIQMEYCPRT--LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 549
+ + E+ +V + ++ ++ A RQ+ +GL H+H +H DL P N
Sbjct: 97 --EMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPEN 154
Query: 550 IFFDARND--IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607
I F + +K+ DFGL L +Q + GT + APE+ +
Sbjct: 155 IMFTTKRSNELKLIDFGLTAHLDPKQSVKV----------------TTGTAEFAAPEVAE 198
Query: 608 GWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-E 663
G P + DM+S+G++ + L PF + + + + + S + SE +
Sbjct: 199 GKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGK 257
Query: 664 SLLRRLMSPSPSDRPSATELLQD 686
+R+L+ P+ R + + L+
Sbjct: 258 DFIRKLLLADPNTRMTIHQALEH 280
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 180 bits (459), Expect = 2e-51
Identities = 64/314 (20%), Positives = 111/314 (35%), Gaps = 66/314 (21%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
+E + LG G FG V +NK A K I K + + + E+ L+ H +
Sbjct: 13 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL--EDYMVEIDILASCDHPN 70
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
+V+ A++ L+I +E+
Sbjct: 71 IVKLLDAFYYEN----------------------------------------NLWILIEF 90
Query: 502 CPRTL--RQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
C + E + + +Q ++ L ++H IIHRDL NI F DIK
Sbjct: 91 CAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIK 150
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW----PKIDEK 615
+ DFG++ + +GT ++ APE+ D K
Sbjct: 151 LADFGVSAKNTRTIQRR---------------DSFIGTPYWMAPEVVMCETSKDRPYDYK 195
Query: 616 ADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 672
AD++SLGI E+ P +++L K + S + L++ +
Sbjct: 196 ADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEK 255
Query: 673 SPSDRPSATELLQD 686
+ R + ++LLQ
Sbjct: 256 NVDARWTTSQLLQH 269
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 181 bits (460), Expect = 4e-51
Identities = 66/351 (18%), Positives = 125/351 (35%), Gaps = 105/351 (29%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
+DFE++ LG G G V +K G A K I L+ K + ++I+RE+ L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA-IRNQIIRELQVLHECNSP 64
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
++V +Y A++ G + I ME
Sbjct: 65 YIVGFYGAFYSDG----------------------------------------EISICME 84
Query: 501 YCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH-GQGIIHRDLTPNNIFFDARNDI 558
+ +L QV + +++ + +++GL ++ I+HRD+ P+NI ++R +I
Sbjct: 85 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEI 144
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618
K+ DFG++ L VGT Y +PE QG ++D+
Sbjct: 145 KLCDFGVSGQLIDSMA-----------------NSFVGTRSYMSPERLQGTH-YSVQSDI 186
Query: 619 YSLGIVFFELW---HPFSTAMERQIV---------------------------------- 641
+S+G+ E+ +P +++
Sbjct: 187 WSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRP 246
Query: 642 ------LSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQ 685
L D P FS + + + + + +P++R +L+
Sbjct: 247 PMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 180 bits (457), Expect = 7e-51
Identities = 59/348 (16%), Positives = 115/348 (33%), Gaps = 76/348 (21%)
Query: 372 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREV 431
+ P ++ +E+L +G G FG V +++ G+ A+KK+ ++++ LRE+
Sbjct: 1 VECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREI 60
Query: 432 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 491
L L+H++VV +
Sbjct: 61 KILQLLKHENVVNLIEICRTKASPYNRCKG------------------------------ 90
Query: 492 STYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 550
+Y+ ++C + F + + ++ GL +IH I+HRD+ N+
Sbjct: 91 --SIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANV 148
Query: 551 FFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610
+K+ DFGLA+ L + Q + +V T +Y PE+ G
Sbjct: 149 LITRDGVLKLADFGLARAFSLAKNSQPNRYTN-----------RVVTLWYRPPELLLGER 197
Query: 611 KIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQE---- 663
D++ G + E+W E+ + + G + P E
Sbjct: 198 DYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEK 257
Query: 664 -------------------------SLLRRLMSPSPSDRPSATELLQD 686
L+ +L+ P+ R + + L
Sbjct: 258 LELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 305
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 175 bits (446), Expect = 9e-50
Identities = 74/316 (23%), Positives = 115/316 (36%), Gaps = 62/316 (19%)
Query: 375 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVAT 433
P + DF+ + LG G F VVL + R YA+K + + + RE
Sbjct: 2 PRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV 61
Query: 434 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLEST 493
+SRL H V+ Y + +
Sbjct: 62 MSRLDHPFFVKLYFTFQDDE---------------------------------------- 81
Query: 494 YLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
LY + Y L + FD+ +IV L ++HG+GIIHRDL P NI
Sbjct: 82 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 141
Query: 553 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612
+ I+I DFG AK L E A VGT Y +PE+
Sbjct: 142 NEDMHIQITDFGTAKVLSPESKQARA-------------NSFVGTAQYVSPELLTEKS-A 187
Query: 613 DEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRL 669
+ +D+++LG + ++L PF E I +K + + P + F + L+ +L
Sbjct: 188 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKF---FPKARDLVEKL 244
Query: 670 MSPSPSDRPSATELLQ 685
+ + R E+
Sbjct: 245 LVLDATKRLGCEEMEG 260
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 177 bits (449), Expect = 2e-49
Identities = 59/315 (18%), Positives = 116/315 (36%), Gaps = 67/315 (21%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 439
+ ++ L+ LG G FG V C K GR + K I + E++ +++L H
Sbjct: 28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPL--DKYTVKNEISIMNQLHH 85
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
++ + A+ + + + +
Sbjct: 86 PKLINLHDAFEDKY----------------------------------------EMVLIL 105
Query: 500 EYCP-RTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
E+ L + D+ + + RQ EGL H+H I+H D+ P NI + +
Sbjct: 106 EFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKA 165
Query: 558 --IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615
+KI DFGLA L +++ + T + APEI P +
Sbjct: 166 SSVKIIDFGLATKLNPDEIVKV----------------TTATAEFAAPEIVDREP-VGFY 208
Query: 616 ADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMS 671
DM+++G++ + L PF+ + + + + + E + S + + ++ L+
Sbjct: 209 TDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQ 268
Query: 672 PSPSDRPSATELLQD 686
P R + + L+
Sbjct: 269 KEPRKRLTVHDALEH 283
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (443), Expect = 2e-49
Identities = 62/315 (19%), Positives = 107/315 (33%), Gaps = 67/315 (21%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
Q +G G FG V K AVK + + + EV L + +H
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 64
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
+++ + + L I +
Sbjct: 65 NILLFMGYS-----------------------------------------TAPQLAIVTQ 83
Query: 501 YCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
+C +L + F+ + RQ +G+ ++H + IIHRDL NNIF +
Sbjct: 84 WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTV 143
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK--IDEKA 616
KIGDFGLA S G+ + APE+ + K ++
Sbjct: 144 KIGDFGLATVK-------------SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 617 DMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELP--PSWVAKFSEQ-ESLLRRLM 670
D+Y+ GIV +EL P+S R ++ + + P + + + L+ +
Sbjct: 191 DVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 250
Query: 671 SPSPSDRPSATELLQ 685
+RP ++L
Sbjct: 251 KKKRDERPLFPQILA 265
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 173 bits (439), Expect = 6e-49
Identities = 62/323 (19%), Positives = 113/323 (34%), Gaps = 74/323 (22%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-------VNDRILREVATL 434
++E + LG G V C +K + YAVK I + + + L+EV L
Sbjct: 4 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63
Query: 435 SRLQ-HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLEST 493
++ H ++++ +ET T
Sbjct: 64 RKVSGHPNIIQLKD-TYETN---------------------------------------T 83
Query: 494 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
+ ++ + + L ++ + R ++E + +H I+HRDL P NI
Sbjct: 84 FFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL 143
Query: 553 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--- 609
D +IK+ DFG + L + GT Y APEI +
Sbjct: 144 DDDMNIKLTDFGFSCQLDPGEKL----------------REVCGTPSYLAPEIIECSMND 187
Query: 610 --PKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-E 663
P ++ DM+S G++ + L PF + ++ + + +S+ +
Sbjct: 188 NHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK 247
Query: 664 SLLRRLMSPSPSDRPSATELLQD 686
L+ R + P R +A E L
Sbjct: 248 DLVSRFLVVQPQKRYTAEEALAH 270
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 172 bits (438), Expect = 2e-48
Identities = 66/351 (18%), Positives = 130/351 (37%), Gaps = 69/351 (19%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
+ ++ LG G F V+L ++K + A+K I K + E+A L +++H
Sbjct: 9 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIA-KKALEGKEGSMENEIAVLHKIKHP 67
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
++V + G +LY+ M+
Sbjct: 68 NIVALDDIYESGG----------------------------------------HLYLIMQ 87
Query: 501 YCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND-- 557
L + + A L Q+++ + ++H GI+HRDL P N+ + + ++
Sbjct: 88 LVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDS 147
Query: 558 -IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616
I I DFGL+K + + GT Y APE+ P +
Sbjct: 148 KIMISDFGLSKMEDPGSVL----------------STACGTPGYVAPEVLAQKP-YSKAV 190
Query: 617 DMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSP 672
D +S+G++ + L PF + ++ LK + E + S+ + +R LM
Sbjct: 191 DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEK 250
Query: 673 SPSDRPSATELLQD---ALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSI 720
P R + + LQ A ++ + ++ + + S + + ++
Sbjct: 251 DPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFAKSKWKQAFNAT 301
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 170 bits (432), Expect = 5e-48
Identities = 70/314 (22%), Positives = 117/314 (37%), Gaps = 55/314 (17%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-VNDRILREVATLSRLQH 439
+ +E + LG GG V L ++ R AVK +R P R RE + L H
Sbjct: 7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 66
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
+V Y + YI M
Sbjct: 67 PAIVAVYDTG------------------------------------EAETPAGPLPYIVM 90
Query: 500 EYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
EY TLR + + + A + + L H GIIHRD+ P NI A N +
Sbjct: 91 EYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAV 150
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618
K+ DFG+A+ + D+G +GT Y +PE +G +D ++D+
Sbjct: 151 KVMDFGIARAIA------------DSGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDV 197
Query: 619 YSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSP 674
YSLG V +E+ PF+ + +++ P + S ++++ + ++ +P
Sbjct: 198 YSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNP 257
Query: 675 SDRPSATELLQDAL 688
+R ++ L
Sbjct: 258 ENRYQTAAEMRADL 271
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 171 bits (435), Expect = 6e-48
Identities = 58/313 (18%), Positives = 109/313 (34%), Gaps = 68/313 (21%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 441
+ + LG G FG V C + Y K +++K + +E++ L+ +H++
Sbjct: 6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD---QVLVKKEISILNIARHRN 62
Query: 442 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 501
++ ++++ L + E+
Sbjct: 63 ILHLHESFESME----------------------------------------ELVMIFEF 82
Query: 502 CP-RTLRQ-VFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND-- 557
+ + + S ++ Q+ E L +H I H D+ P NI + R
Sbjct: 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSST 142
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617
IKI +FG A+ LK + Y APE+ Q + D
Sbjct: 143 IKIIEFGQARQLKPGD----------------NFRLLFTAPEYYAPEVHQHDV-VSTATD 185
Query: 618 MYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPS 673
M+SLG + + L +PF +QI+ + + + + S + + RL+
Sbjct: 186 MWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKE 245
Query: 674 PSDRPSATELLQD 686
R +A+E LQ
Sbjct: 246 RKSRMTASEALQH 258
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 164 bits (417), Expect = 3e-46
Identities = 50/312 (16%), Positives = 106/312 (33%), Gaps = 67/312 (21%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
D L+ LG G FG V K + A+K I+ S D + E + L H+
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHE 59
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
+V+ Y + ++I E
Sbjct: 60 KLVQLYGVCTKQR----------------------------------------PIFIITE 79
Query: 501 YCPR--TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
Y L + E F + + + + E + ++ + +HRDL N + + +
Sbjct: 80 YMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVV 139
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618
K+ DFGL++++ ++ G ++ PE+ K K+D+
Sbjct: 140 KVSDFGLSRYVLDDEYTSS--------------VGSKFPVRWSPPEVLMY-SKFSSKSDI 184
Query: 619 YSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 674
++ G++ +E++ P+ + + P ++ + +++
Sbjct: 185 WAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE--KVYTIMYSCWHEKA 242
Query: 675 SDRPSATELLQD 686
+RP+ LL +
Sbjct: 243 DERPTFKILLSN 254
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 166 bits (420), Expect = 3e-46
Identities = 70/319 (21%), Positives = 117/319 (36%), Gaps = 70/319 (21%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK----DKSLPVNDRILREVATLSR 436
+ ++ + LG G F V C+ K G YA K I+ + + + I REV+ L
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 437 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 496
+QH +V+ ++ + T +
Sbjct: 70 IQHPNVITLHEVY----------------------------------------ENKTDVI 89
Query: 497 IQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 555
+ +E L + +E A +QI+ G+ ++H I H DL P NI R
Sbjct: 90 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 149
Query: 556 ND----IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611
N IKI DFGLA + GT + APEI P
Sbjct: 150 NVPKPRIKIIDFGLAHKIDFGNEF----------------KNIFGTPEFVAPEIVNYEP- 192
Query: 612 IDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLR 667
+ +ADM+S+G++ + L PF +++ + + E + + S + +R
Sbjct: 193 LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIR 252
Query: 668 RLMSPSPSDRPSATELLQD 686
RL+ P R + + LQ
Sbjct: 253 RLLVKDPKKRMTIQDSLQH 271
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 166 bits (420), Expect = 6e-46
Identities = 79/358 (22%), Positives = 129/358 (36%), Gaps = 68/358 (18%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN-DRILREVATLSR-L 437
+ DF + LG G FG V L + K + +A+K ++ + + + + E LS
Sbjct: 1 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 60
Query: 438 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
+H + + + L+
Sbjct: 61 EHPFLTHMFCTFQTKE----------------------------------------NLFF 80
Query: 498 QMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 556
MEY L +S FD A +I+ GL +H +GI++RDL +NI D
Sbjct: 81 VMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG 140
Query: 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616
IKI DFG+ K L GT Y APEI G +
Sbjct: 141 HIKIADFGMCKENMLGDAKT---------------NTFCGTPDYIAPEILLGQK-YNHSV 184
Query: 617 DMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 673
D +S G++ +E+ PF E ++ ++ P W+ K E + LL +L
Sbjct: 185 DWWSFGVLLYEMLIGQSPFHGQDEEEL-FHSIRMDNPFYPRWLEK--EAKDLLVKLFVRE 241
Query: 674 PSDRPSAT-ELLQDALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMKH 730
P R ++ Q L ++ +E L+ + + + S FD+E L+ K
Sbjct: 242 PEKRLGVRGDIRQHPLFREINWEELER--KEIDPPFRPKVKSPFDCSNFDKEFLNEKP 297
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 163 bits (414), Expect = 9e-46
Identities = 61/313 (19%), Positives = 107/313 (34%), Gaps = 73/313 (23%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 439
+ + + LQ +G G FG V+L + G AVK I+ + L E + +++L+H
Sbjct: 6 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATA----QAFLAEASVMTQLRH 59
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
++V+ E E LYI
Sbjct: 60 SNLVQLLGVIVE---------------------------------------EKGGLYIVT 80
Query: 500 EYCPR-TLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 556
EY + +L S + + E + ++ G +HRDL N+ N
Sbjct: 81 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN 140
Query: 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616
K+ DFGL K S +TAPE + K K+
Sbjct: 141 VAKVSDFGLTKEA------------------SSTQDTGKLPVKWTAPEALREK-KFSTKS 181
Query: 617 DMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 672
D++S GI+ +E++ P+ + +V +KG + +++
Sbjct: 182 DVWSFGILLWEIYSFGRVPYPRIPLKDVV--PRVEKGYKMDAPDGCPPAVYEVMKNCWHL 239
Query: 673 SPSDRPSATELLQ 685
+ RPS +L +
Sbjct: 240 DAAMRPSFLQLRE 252
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 163 bits (414), Expect = 1e-45
Identities = 71/333 (21%), Positives = 115/333 (34%), Gaps = 83/333 (24%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL----KDKSLPVNDRILREVATLSR 436
+ ++ LG GGFG V D A+K + LP R+ EV L +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 437 LQHQH--VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 494
+ V+R +
Sbjct: 64 VSSGFSGVIRLLDWFERPD----------------------------------------S 83
Query: 495 LYIQMEYCP--RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 552
+ +E + L +ELA F Q++E + H H G++HRD+ NI
Sbjct: 84 FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 143
Query: 553 DA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611
D R ++K+ DFG LK T GT Y+ PE +
Sbjct: 144 DLNRGELKLIDFGSGALLKDTVY-----------------TDFDGTRVYSPPEWIRYHRY 186
Query: 612 IDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRR 668
A ++SLGI+ +++ PF + +I+ + + + E + L+R
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEH--DEEIIRGQVFFRQRVSS-------ECQHLIRW 237
Query: 669 LMSPSPSDRPSATELL-----QDALPPQMEYEL 696
++ PSDRP+ E+ QD L PQ E+
Sbjct: 238 CLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 270
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 161 bits (408), Expect = 1e-44
Identities = 63/335 (18%), Positives = 106/335 (31%), Gaps = 87/335 (25%)
Query: 384 EELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP---VNDRILREVATLSRLQHQ 440
E+L LG G F V ++K + A+KKI+L +S +N LRE+ L L H
Sbjct: 1 EKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHP 60
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
+++ A+ + + +
Sbjct: 61 NIIGLLDAFGHKS----------------------------------------NISLVFD 80
Query: 501 YCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
+ + ++ ++GL ++H I+HRDL PNN+ D +K
Sbjct: 81 FMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLK 140
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619
+ DFGLAK T QV T +Y APE+ G DM+
Sbjct: 141 LADFGLAKSFGSPNRAY---------------THQVVTRWYRAPELLFGARMYGVGVDMW 185
Query: 620 SLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQE------------- 663
++G + EL + + + G
Sbjct: 186 AVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPL 245
Query: 664 ------------SLLRRLMSPSPSDRPSATELLQD 686
L++ L +P R +AT+ L+
Sbjct: 246 HHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 280
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 161 bits (409), Expect = 1e-44
Identities = 59/332 (17%), Positives = 111/332 (33%), Gaps = 73/332 (21%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHY---AVKKIRLKDKSLPVNDRILREVATLSR 436
++ + Q +G G FG V KL G+ A+K ++ + L E + + +
Sbjct: 25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLK-SGYTEKQRRDFLSEASIMGQ 83
Query: 437 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 496
H +V+ + ST +
Sbjct: 84 FDHPNVIHLEGVVTK----------------------------------------STPVM 103
Query: 497 IQMEYCPRTLRQVF--ESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 554
I E+ F ++ F + R I G+ ++ +HRDL NI ++
Sbjct: 104 IITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNS 163
Query: 555 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614
K+ DFGL++FL+ + G +TAPE Q K
Sbjct: 164 NLVCKVSDFGLSRFLE----------DDTSDPTYTSALGGKIPIRWTAPEAIQYR-KFTS 212
Query: 615 KADMYSLGIVFFEL----WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 670
+D++S GIV +E+ P+ + ++ + ++ P + S L+
Sbjct: 213 ASDVWSYGIVMWEVMSYGERPYWDMTNQDVI--NAIEQDYRLPPPMDCPSALHQLMLDCW 270
Query: 671 SPSPSDRPSATELLQDALPPQMEYELLDNILR 702
+ RP +++ LD ++R
Sbjct: 271 QKDRNHRPKFGQIVNT----------LDKMIR 292
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 161 bits (409), Expect = 3e-44
Identities = 75/382 (19%), Positives = 131/382 (34%), Gaps = 84/382 (21%)
Query: 372 MSLPSSRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILRE 430
+ + + ++D++ Q LG G G V+ NK +A+K ++ + RE
Sbjct: 2 LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-------KARRE 54
Query: 431 VATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENK 489
V R Q H+VR + +
Sbjct: 55 VELHWRASQCPHIVRIVDVY------------------------------------ENLY 78
Query: 490 LESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 546
L I ME L + F + A + + I E + ++H I HRD+
Sbjct: 79 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 138
Query: 547 PNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 603
P N+ + ++ +K+ DFG AK + T +Y AP
Sbjct: 139 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY----------------TPYYVAP 182
Query: 604 EIEQGWPKIDEKADMYSLGIVFFELW---HPF----STAMERQIVLSDLKQKGELPPSWV 656
E+ D+ DM+SLG++ + L PF A+ + + E P
Sbjct: 183 EVLGPEK-YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 241
Query: 657 AKFSEQ-ESLLRRLMSPSPSDRPSATELL------QDALPPQMEYELLDNILRMMHSSED 709
++ SE+ + L+R L+ P+ R + TE + Q PQ + ED
Sbjct: 242 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWED 301
Query: 710 T--SIYDKVVSSIFDEETLDMK 729
+ + + D E + +K
Sbjct: 302 VKEEMTSALATMRVDYEQIKIK 323
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 159 bits (402), Expect = 5e-44
Identities = 69/312 (22%), Positives = 101/312 (32%), Gaps = 69/312 (22%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
+ ++ LG G FG V + AVK ++ S D L E + +LQHQ
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQ 68
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
+VR Y + +YI E
Sbjct: 69 RLVRLYAVVTQEP-----------------------------------------IYIITE 87
Query: 501 YCPRTLRQVF---ESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
Y F S + QI EG+A I + IHRDL NI
Sbjct: 88 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 147
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617
KI DFGLA+ ++ + G +TAPE K+D
Sbjct: 148 CKIADFGLARLIEDNEYTAR--------------EGAKFPIKWTAPEAINYGT-FTIKSD 192
Query: 618 MYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPS 673
++S GI+ E+ M V+ +L++ + P + E L+R
Sbjct: 193 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE--ELYQLMRLCWKER 250
Query: 674 PSDRPSATELLQ 685
P DRP+ L
Sbjct: 251 PEDRPTFDYLRS 262
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 161 bits (409), Expect = 5e-44
Identities = 70/364 (19%), Positives = 119/364 (32%), Gaps = 79/364 (21%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND----RILREVATLS 435
+NDF + +G GGFG V C+ G+ YA+K + K + + ++ +S
Sbjct: 3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 62
Query: 436 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 495
+V A+ L
Sbjct: 63 TGDCPFIVCMSYAFHTPD----------------------------------------KL 82
Query: 496 YIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 554
++ L + F + +I+ GL H+H + +++RDL P NI D
Sbjct: 83 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE 142
Query: 555 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614
++I D GLA ++ VGT+ Y APE+ Q D
Sbjct: 143 HGHVRISDLGLACDFSKKKP-----------------HASVGTHGYMAPEVLQKGVAYDS 185
Query: 615 KADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 671
AD +SLG + F+L PF + D + E SLL L+
Sbjct: 186 SADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQ 245
Query: 672 PSPSDRPS-----ATELLQDALPPQMEYELLDN------ILRMMHSSEDTSIYDKVVSSI 720
+ R A E+ + ++++++ ++ +D
Sbjct: 246 RDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFD---IGS 302
Query: 721 FDEE 724
FDEE
Sbjct: 303 FDEE 306
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 160 bits (404), Expect = 5e-44
Identities = 53/314 (16%), Positives = 104/314 (33%), Gaps = 41/314 (13%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLS 435
N+ E ++ +G G FG V + AVK ++ ++ S + RE A ++
Sbjct: 13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLK-EEASADMQADFQREAALMA 71
Query: 436 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 495
+ ++V+ + M G L S T
Sbjct: 72 EFDNPNIVKLLGVCAVGKPMCLLFEYMAY-GDLNEFLRSMS--------------PHTVC 116
Query: 496 YIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 555
+ R + RQ+ G+A++ + +HRDL N
Sbjct: 117 SLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGEN 176
Query: 556 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615
+KI DFGL++ + + + PE +
Sbjct: 177 MVVKIADFGLSRNI-------------YSADYYKADGNDAIPIRWMPPESIFYNR-YTTE 222
Query: 616 ADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 671
+D+++ G+V +E++ P+ +++ + G + E +L+R S
Sbjct: 223 SDVWAYGVVLWEIFSYGLQPYYGMAHEEVI--YYVRDGNILACPENCPLELYNLMRLCWS 280
Query: 672 PSPSDRPSATELLQ 685
P+DRPS + +
Sbjct: 281 KLPADRPSFCSIHR 294
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 158 bits (400), Expect = 7e-44
Identities = 56/311 (18%), Positives = 104/311 (33%), Gaps = 67/311 (21%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
++ +Q +G G FG V L + A+K IR + + + E + +L H
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHP 60
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
+V+ Y E + + E
Sbjct: 61 KLVQLYGVCLEQA----------------------------------------PICLVFE 80
Query: 501 YCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
+ L + F E + + EG+A++ +IHRDL N I
Sbjct: 81 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVI 140
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618
K+ DFG+ +F+ +Q TG + +PE+ + K+D+
Sbjct: 141 KVSDFGMTRFVLDDQYTSS--------------TGTKFPVKWASPEVFSFS-RYSSKSDV 185
Query: 619 YSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSP 674
+S G++ +E++ V+ D+ L P + ++ P
Sbjct: 186 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAST--HVYQIMNHCWKERP 243
Query: 675 SDRPSATELLQ 685
DRP+ + LL+
Sbjct: 244 EDRPAFSRLLR 254
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 159 bits (404), Expect = 8e-44
Identities = 71/359 (19%), Positives = 124/359 (34%), Gaps = 74/359 (20%)
Query: 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRLKDKSLPVNDRILREVATLSRLQ 438
+F++++ LG G FG V +G + K + S N IL E ++ +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
+ HV R + + +
Sbjct: 70 NPHVCRLLGICLTST-----------------------------------------VQLI 88
Query: 499 MEYCPR--TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 556
+ P L V E D+ + + QI +G+ ++ + ++HRDL N+
Sbjct: 89 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ 148
Query: 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616
+KI DFGLAK L E+ + A G + A E ++
Sbjct: 149 HVKITDFGLAKLLGAEEKEYHA-------------EGGKVPIKWMALESILHRI-YTHQS 194
Query: 617 DMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 672
D++S G+ +EL P+ +I + +KGE P + ++ +
Sbjct: 195 DVWSYGVTVWELMTFGSKPYDGIPASEIS--SILEKGERLPQPPICTIDVYMIMVKCWMI 252
Query: 673 SPSDRPSATELLQD----ALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLD 727
RP EL+ + A PQ Y ++ RM S S + ++ DEE +D
Sbjct: 253 DADSRPKFRELIIEFSKMARDPQ-RYLVIQGDERMHLPSPTDSNFY---RALMDEEDMD 307
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 159 bits (402), Expect = 9e-44
Identities = 73/338 (21%), Positives = 122/338 (36%), Gaps = 86/338 (25%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 439
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
++V+ LY+
Sbjct: 61 PNIVKLLDVIHTEN----------------------------------------KLYLVF 80
Query: 500 EYCPRTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
E+ + L++ ++ L Q+++GLA H ++HRDL P N+ +
Sbjct: 81 EFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 140
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617
IK+ DFGLA+ + T +V T +Y APEI G D
Sbjct: 141 IKLADFGLARAFGVPVRTY---------------THEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 618 MYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELP-----------------PSWVA 657
++SLG +F E+ F E + + G P W
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 245
Query: 658 KF---------SEQESLLRRLMSPSPSDRPSATELLQD 686
+ + SLL +++ P+ R SA L
Sbjct: 246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 160 bits (405), Expect = 1e-43
Identities = 67/359 (18%), Positives = 115/359 (32%), Gaps = 91/359 (25%)
Query: 362 KPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL 421
K + +P P + + + +G+G FG V K G A+KK+ +
Sbjct: 2 KVTTVVATPGQG-PDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-- 58
Query: 422 PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSA 481
RE+ + +L H ++VR ++ +G
Sbjct: 59 ----FKNRELQIMRKLDHCNIVRLRYFFYSSG---------------------------- 86
Query: 482 DVTGQENKLESTYLYIQMEYCP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537
K + YL + ++Y P R R + Q+ LA+IH
Sbjct: 87 ------EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 538 QGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 596
GI HRD+ P N+ D +K+ DFG AK L + + +
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----------------YIC 184
Query: 597 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPP 653
+ +Y APE+ G D++S G V EL F ++ +K G
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 654 SWVAKFSEQE--------------------------SLLRRLMSPSPSDRPSATELLQD 686
+ + + +L RL+ +P+ R + E
Sbjct: 245 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 157 bits (397), Expect = 2e-43
Identities = 55/304 (18%), Positives = 104/304 (34%), Gaps = 63/304 (20%)
Query: 389 LGHGGFGHVVLC--KNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 446
LG G FG V + K + AVK ++ + + D +L E + +L + ++VR
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 447 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-T 505
G+ + + + ME
Sbjct: 75 ------GICEAES-----------------------------------WMLVMEMAELGP 93
Query: 506 LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGL 565
L + + H + L Q+ G+ ++ +HRDL N+ ++ KI DFGL
Sbjct: 94 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 153
Query: 566 AKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVF 625
+K L+ ++ A T + APE + K+D++S G++
Sbjct: 154 SKALRADENYYKA------------QTHGKWPVKWYAPECINYYK-FSSKSDVWSFGVLM 200
Query: 626 FELW----HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT 681
+E + P+ ++ + +KGE E L+ + +RP
Sbjct: 201 WEAFSYGQKPYRGMKGSEVT--AMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFA 258
Query: 682 ELLQ 685
+
Sbjct: 259 AVEL 262
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 157 bits (398), Expect = 5e-43
Identities = 78/366 (21%), Positives = 135/366 (36%), Gaps = 84/366 (22%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQ 438
L DF+ L+ LG G FG V L +++ +GR+YA+K ++ + L + E LS +
Sbjct: 3 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT 62
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
H ++R + + + +++
Sbjct: 63 HPFIIRMWGTFQDAQ----------------------------------------QIFMI 82
Query: 499 MEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
M+Y L + F +A ++ L ++H + II+RDL P NI D
Sbjct: 83 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGH 142
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617
IKI DFG AK++ GT Y APE+ P ++ D
Sbjct: 143 IKITDFGFAKYVPDVT------------------YTLCGTPDYIAPEVVSTKP-YNKSID 183
Query: 618 MYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 674
+S GI+ +E+ PF + + L + PP + + LL RL++
Sbjct: 184 WWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKD---LLSRLITRDL 240
Query: 675 SDR-----PSATELLQDALPPQMEYELLDN-------ILRMMHSSEDTSIYDKVVSSIFD 722
S R ++ ++ +E L + + DTS +DK +
Sbjct: 241 SQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFDK-----YP 295
Query: 723 EETLDM 728
EE ++
Sbjct: 296 EEDINY 301
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 156 bits (396), Expect = 7e-43
Identities = 61/350 (17%), Positives = 110/350 (31%), Gaps = 56/350 (16%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN-DRILREVATLSRL- 437
ND + +G G FG V+ + K DG R+K+ + + E+ L +L
Sbjct: 9 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG 68
Query: 438 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
H +++ A G + L
Sbjct: 69 HHPNIINLLGACEHRGYLYLAIEYAPHG-----------------------NLLDFLRKS 105
Query: 498 QMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
++ + + H + G+ ++ + IHRDL NI
Sbjct: 106 RVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYV 165
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617
KI DFGL++ + V V T + A E +D
Sbjct: 166 AKIADFGLSRGQE----------------VYVKKTMGRLPVRWMAIESLNYSV-YTTNSD 208
Query: 618 MYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 674
++S G++ +E+ M + L Q G + E L+R+ P
Sbjct: 209 VWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-GYRLEKPLNCDDEVYDLMRQCWREKP 267
Query: 675 SDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEE 724
+RPS ++L L+ +L + +T++Y+K + D
Sbjct: 268 YERPSFAQILVS----------LNRMLEERKTYVNTTLYEKFTYAGIDCS 307
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 156 bits (394), Expect = 8e-43
Identities = 62/337 (18%), Positives = 123/337 (36%), Gaps = 86/337 (25%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 439
+ + L+ +G G +G V +N G +A+KKIRL+ + + +RE++ L L+H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
++V+ Y L +
Sbjct: 60 SNIVKLYDVIHT----------------------------------------KKRLVLVF 79
Query: 500 EYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
E+ + L+++ + + + A Q++ G+A+ H + ++HRDL P N+ + ++
Sbjct: 80 EHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGEL 139
Query: 559 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618
KI DFGLA+ + ++ T +Y AP++ G K D+
Sbjct: 140 KIADFGLARAFGIPVRKYT---------------HEIVTLWYRAPDVLMGSKKYSTTIDI 184
Query: 619 YSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQE------------ 663
+S+G +F E+ F E ++ + G +E
Sbjct: 185 WSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPL 244
Query: 664 --------------SLLRRLMSPSPSDRPSATELLQD 686
LL +++ P+ R +A + L+
Sbjct: 245 PWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 155 bits (392), Expect = 1e-42
Identities = 61/316 (19%), Positives = 108/316 (34%), Gaps = 65/316 (20%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLP-VNDRILREVATLS 435
D L+ LG G FG V + AVK ++ S P D +REV +
Sbjct: 7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMH 66
Query: 436 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 495
L H++++R Y + +
Sbjct: 67 SLDHRNLIRLYGVV-----------------------------------------LTPPM 85
Query: 496 YIQMEYCPR--TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 553
+ E P L ++ + HF Q+ EG+ ++ + IHRDL N+
Sbjct: 86 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLA 145
Query: 554 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613
R+ +KIGDFGL + L V + + + APE +
Sbjct: 146 TRDLVKIGDFGLMRALP------------QNDDHYVMQEHRKVPFAWCAPESLKTRT-FS 192
Query: 614 EKADMYSLGIVFFEL----WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRL 669
+D + G+ +E+ P+ + +L + ++GE P + +++ +
Sbjct: 193 HASDTWMFGVTLWEMFTYGQEPWI-GLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQC 251
Query: 670 MSPSPSDRPSATELLQ 685
+ P DRP+ L
Sbjct: 252 WAHKPEDRPTFVALRD 267
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 154 bits (391), Expect = 2e-42
Identities = 67/346 (19%), Positives = 110/346 (31%), Gaps = 75/346 (21%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
N + + +G G FG + L + G A+K +K K + ++ E +Q
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGG 62
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
+ + G Y + ME
Sbjct: 63 VGIPTIRWCGAEG---------------------------------------DYNVMVME 83
Query: 501 YCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF---DARN 556
+L +F F + L Q++ + +IH + IHRD+ P+N N
Sbjct: 84 LLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGN 143
Query: 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616
+ I DFGLAK + + Q + + GT Y + G +
Sbjct: 144 LVYIIDFGLAKKYRDARTHQHIPYRENKNL--------TGTARYASINTHLGIE-QSRRD 194
Query: 617 DMYSLGIVFFEL------WHPFSTAMERQIVLSDLKQKGELPPSWVAKF--SEQESLLRR 668
D+ SLG V W A +RQ ++K P + K SE + L
Sbjct: 195 DLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNF 254
Query: 669 LMSPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIYD 714
S D+P + L +L N+ S D ++D
Sbjct: 255 CRSLRFDDKPDYSYL----------RQLFRNLFHRQGFSYD-YVFD 289
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 156 bits (394), Expect = 3e-42
Identities = 60/335 (17%), Positives = 109/335 (32%), Gaps = 80/335 (23%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+ L +G G +G V + ++ A+KKI + R LRE+ L R +H+++
Sbjct: 10 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHENI 68
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
+ + +Y+
Sbjct: 69 IGINDIIRAPTIEQMK-----------------------------------DVYLVTHLM 93
Query: 503 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 562
L ++ ++ H + + QI+ GL +IH ++HRDL P+N+ + D+KI D
Sbjct: 94 GADLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 152
Query: 563 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 622
FGLA+ + T V T +Y APEI + D++S+G
Sbjct: 153 FGLARVADPDHDHTGF------------LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 200
Query: 623 IVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKF-------------------- 659
+ E+ F + L G +
Sbjct: 201 CILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPW 260
Query: 660 --------SEQESLLRRLMSPSPSDRPSATELLQD 686
S+ LL ++++ +P R + L
Sbjct: 261 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 295
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 154 bits (390), Expect = 7e-42
Identities = 57/316 (18%), Positives = 113/316 (35%), Gaps = 44/316 (13%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGR-----HYAVKKIRLKDKSLPVNDRILREVATLS 435
+ E + LG G FG V+ + AVK ++ + + ++ E+ ++
Sbjct: 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLK-EKADSSEREALMSELKMMT 95
Query: 436 RL-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 494
+L H+++V A +G + G L + S R S D
Sbjct: 96 QLGSHENIVNLLGACTLSGPIYLIFEYCCY-GDLLNYLRSKREKFSED------------ 142
Query: 495 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 554
++EY + + E + E Q+ +G+ + + +HRDL N+
Sbjct: 143 ---EIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTH 199
Query: 555 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614
+KI DFGLA+ + + V + APE
Sbjct: 200 GKVVKICDFGLARDI-------------MSDSNYVVRGNARLPVKWMAPESLFEGI-YTI 245
Query: 615 KADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRL 669
K+D++S GI+ +E++ +P+ ++ ++ P + + E +++
Sbjct: 246 KSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATE--EIYIIMQSC 303
Query: 670 MSPSPSDRPSATELLQ 685
+ RPS L
Sbjct: 304 WAFDSRKRPSFPNLTS 319
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 152 bits (386), Expect = 8e-42
Identities = 61/333 (18%), Positives = 110/333 (33%), Gaps = 69/333 (20%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 439
D LG G +G V K AVK ++ + + L+E A + ++H
Sbjct: 16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKH 72
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
++V+ YI
Sbjct: 73 PNLVQLLGVCTREP----------------------------------------PFYIIT 92
Query: 500 EYCPRTLRQVF---ESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 556
E+ + + + ++ QI + ++ + IHRDL N +
Sbjct: 93 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH 152
Query: 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616
+K+ DFGL++ + TG G +TAPE K K+
Sbjct: 153 LVKVADFGLSRLM--------------TGDTYTAHAGAKFPIKWTAPESLAYN-KFSIKS 197
Query: 617 DMYSLGIVFFELW---HPFSTAMERQIVLSDLKQ--KGELPPSWVAKFSEQESLLRRLMS 671
D+++ G++ +E+ ++ V L++ + E P K E L+R
Sbjct: 198 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE---LMRACWQ 254
Query: 672 PSPSDRPSATELLQDALPPQMEYELLDNILRMM 704
+PSDRPS E+ Q E + D + + +
Sbjct: 255 WNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 287
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 153 bits (386), Expect = 8e-42
Identities = 69/346 (19%), Positives = 117/346 (33%), Gaps = 89/346 (25%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 439
+ +E+L+ +G G +G V KN+ A+K++RL D V LRE+ L L+H
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
+++VR + + +
Sbjct: 61 KNIVRLHDVLHS---------------------------------------DKKLTLVFE 81
Query: 500 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 559
+ D E+ Q+++GL H + ++HRDL P N+ + ++K
Sbjct: 82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELK 141
Query: 560 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619
+ +FGLA+ + + +V T +Y P++ G DM+
Sbjct: 142 LANFGLARAFGIPVRCY---------------SAEVVTLWYRPPDVLFGAKLYSTSIDMW 186
Query: 620 SLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPS---------------------- 654
S G +F EL P + L + + P
Sbjct: 187 SAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATT 246
Query: 655 ----WVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQ-----DALPP 690
V K + LL+ L+ +P R SA E LQ D PP
Sbjct: 247 SLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 154 bits (390), Expect = 9e-42
Identities = 69/316 (21%), Positives = 110/316 (34%), Gaps = 69/316 (21%)
Query: 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN-DRILREVATLSRLQ 438
+NDF+ L+ LG G FG V+L + K GR+YA+K +R + + E L +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
H + A+ L
Sbjct: 64 HPFLTALKYAFQTHD----------------------------------------RLCFV 83
Query: 499 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
MEY L F +E A +IV L ++H + +++RD+ N+ D
Sbjct: 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH 143
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617
IKI DFGL K + GT Y APE+ + D
Sbjct: 144 IKITDFGLCKEGISDGATMK---------------TFCGTPEYLAPEVLEDND-YGRAVD 187
Query: 618 MYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 674
+ LG+V +E+ PF ++ L ++ P + + +SLL L+ P
Sbjct: 188 WWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA---KSLLAGLLKKDP 244
Query: 675 SDRPS-----ATELLQ 685
R A E+++
Sbjct: 245 KQRLGGGPSDAKEVME 260
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 154 bits (391), Expect = 9e-42
Identities = 71/337 (21%), Positives = 124/337 (36%), Gaps = 84/337 (24%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
+ +LQP+G G +G V + G A+KK+ +S R RE+ L ++H+
Sbjct: 18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE 77
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
+V+ + E + T Y+ M
Sbjct: 78 NVIGLLDVFTP----------------------------------DETLDDFTDFYLVMP 103
Query: 501 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 560
+ L ++ + ++ ++ L Q+++GL +IH GIIHRDL P N+ + ++KI
Sbjct: 104 FMGTDLGKLMK-HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKI 162
Query: 561 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620
DFGLA+ E TG V T +Y APE+ W + + D++S
Sbjct: 163 LDFGLARQADSEM------------------TGYVVTRWYRAPEVILNWMRYTQTVDIWS 204
Query: 621 LGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQES------------- 664
+G + E+ F + + +K G P +V + E+
Sbjct: 205 VGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKK 264
Query: 665 ---------------LLRRLMSPSPSDRPSATELLQD 686
LL +++ R +A E L
Sbjct: 265 DFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 301
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 152 bits (385), Expect = 1e-41
Identities = 59/311 (18%), Positives = 98/311 (31%), Gaps = 67/311 (21%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
LG G FG V + A+K ++ S + L+E + +L+H+
Sbjct: 17 ESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHE 72
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
+V+ Y +YI E
Sbjct: 73 KLVQLYAVV-----------------------------------------SEEPIYIVTE 91
Query: 501 YCPR---TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 557
Y + E+ + + QI G+A++ +HRDL NI
Sbjct: 92 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 151
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617
K+ DFGLA+ ++ + G +TAPE + K+D
Sbjct: 152 CKVADFGLARLIEDNEYTAR--------------QGAKFPIKWTAPEAALYG-RFTIKSD 196
Query: 618 MYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 674
++S GI+ EL M + VL D ++G P L+ + P
Sbjct: 197 VWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKEP 255
Query: 675 SDRPSATELLQ 685
+RP+ L
Sbjct: 256 EERPTFEYLQA 266
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 150 bits (380), Expect = 6e-41
Identities = 50/305 (16%), Positives = 94/305 (30%), Gaps = 65/305 (21%)
Query: 389 LGHGGFGHVVLCKNKL--DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 446
LG G FG V ++ A+K ++ + + ++RE + +L + ++VR
Sbjct: 17 LGCGNFGSVRQGVYRMRKKQIDVAIKVLK-QGTEKADTEEMMREAQIMHQLDNPYIVRLI 75
Query: 447 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-T 505
++ L + ME
Sbjct: 76 GVC-----------------------------------------QAEALMLVMEMAGGGP 94
Query: 506 LRQV-FESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFG 564
L + + L Q+ G+ ++ + +HRDL N+ R+ KI DFG
Sbjct: 95 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFG 154
Query: 565 LAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 624
L+K L + + APE ++D++S G+
Sbjct: 155 LSKAL------------GADDSYYTARSAGKWPLKWYAPECINFRK-FSSRSDVWSYGVT 201
Query: 625 FFEL----WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA 680
+E P+ +++ + K P E +L+ DRP
Sbjct: 202 MWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP--ELYALMSDCWIYKWEDRPDF 259
Query: 681 TELLQ 685
+ Q
Sbjct: 260 LTVEQ 264
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 151 bits (381), Expect = 7e-41
Identities = 58/332 (17%), Positives = 110/332 (33%), Gaps = 65/332 (19%)
Query: 363 PSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHV---VLCKNKLDGRHYAVKKIRLKDK 419
P + ++ + S + F E+ +G G FG V L N H AVK + +
Sbjct: 11 PELVQAVQHVVIGPSSLIVHFNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RIT 67
Query: 420 SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAAS 479
+ + L E + H +V+ +
Sbjct: 68 DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS--------------------------- 100
Query: 480 SADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAW--HLFRQIVEGLAHIHG 537
+ + Y + F + + + Q+ +G+ +
Sbjct: 101 ------------EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 148
Query: 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 597
+ +HRDL N D + +K+ DFGLA+ + ++ D + TG
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS-----------VHNKTGAKLP 197
Query: 598 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELPP 653
+ A E Q K+D++S G++ +EL P+ I + L+ + L P
Sbjct: 198 VKWMALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 256
Query: 654 SWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685
+ ++ + P RPS +EL+
Sbjct: 257 EYCPD--PLYEVMLKCWHPKAEMRPSFSELVS 286
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 149 bits (378), Expect = 2e-40
Identities = 67/322 (20%), Positives = 120/322 (37%), Gaps = 69/322 (21%)
Query: 380 LNDFEELQPLGHGGFGHVVLCK---NKLDGRHYAVKKIRLKD--KSLPVNDRILREVATL 434
+ +FE L+ LG G +G V L + G+ YA+K ++ + + E L
Sbjct: 23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 82
Query: 435 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 494
++ + F+T T
Sbjct: 83 EHIRQSPFLVTLHYAFQTE---------------------------------------TK 103
Query: 495 LYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 553
L++ ++Y L + F + +IV L H+H GII+RD+ NI D
Sbjct: 104 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD 163
Query: 554 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK-I 612
+ + + DFGL+K ++ ++ F GT Y AP+I +G
Sbjct: 164 SNGHVVLTDFGLSKEFVADETERAYDFC--------------GTIEYMAPDIVRGGDSGH 209
Query: 613 DEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRR 668
D+ D +SLG++ +EL PF+ E+ ++ + P + + S + L++R
Sbjct: 210 DKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQR 269
Query: 669 LMSPSPSDRPS-----ATELLQ 685
L+ P R A E+ +
Sbjct: 270 LLMKDPKKRLGCGPRDADEIKE 291
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 146 bits (369), Expect = 2e-39
Identities = 51/346 (14%), Positives = 106/346 (30%), Gaps = 77/346 (22%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
++ + +G G FG + N L+ + A+K + + ++ E T L
Sbjct: 7 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA----PQLRDEYRTYKLLAGCTG 62
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
+ + + G + + ++
Sbjct: 63 IPNVYYFGQEG---------------------------------------LHNVLVIDLL 83
Query: 503 PRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-----RN 556
+L + + F + +Q++ + IH + +++RD+ P+N N
Sbjct: 84 GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNAN 143
Query: 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616
I + DFG+ KF + T + GT Y + G +
Sbjct: 144 MIYVVDFGMVKFYR--------DPVTKQHIPYREKKNLSGTARYMSINTHLGRE-QSRRD 194
Query: 617 DMYSLGIVFFEL-----WHPFSTAMERQIVLSDLKQKGELPP--SWVAKFSEQ-ESLLRR 668
D+ +LG VF A + + +K + P A F E+ +
Sbjct: 195 DLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHY 254
Query: 669 LMSPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIYD 714
+ + P L L +L ++++ED +D
Sbjct: 255 ARNLAFDATPDYDYL----------QGLFSKVLERLNTTED-ENFD 289
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 144 bits (364), Expect = 5e-39
Identities = 57/315 (18%), Positives = 103/315 (32%), Gaps = 68/315 (21%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRL 437
E + +G G FG V A+K + S V ++ L+E T+ +
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQF 65
Query: 438 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 497
H H+V+ E ++I
Sbjct: 66 DHPHIVKLIGVITEN-----------------------------------------PVWI 84
Query: 498 QMEYCPR-TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 555
ME C LR + + D Q+ LA++ + +HRD+ N+ +
Sbjct: 85 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN 144
Query: 556 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615
+ +K+GDFGL+++++ + + APE +
Sbjct: 145 DCVKLGDFGLSRYME--------------DSTYYKASKGKLPIKWMAPESINFR-RFTSA 189
Query: 616 ADMYSLGIVFFEL----WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 671
+D++ G+ +E+ PF ++ + GE P SL+ + +
Sbjct: 190 SDVWMFGVCMWEILMHGVKPFQGVKNNDVI--GRIENGERLPMPPNCPPTLYSLMTKCWA 247
Query: 672 PSPSDRPSATELLQD 686
PS RP TEL
Sbjct: 248 YDPSRRPRFTELKAQ 262
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 144 bits (364), Expect = 7e-39
Identities = 53/314 (16%), Positives = 97/314 (30%), Gaps = 64/314 (20%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDG----RHYAVKKIRLKDKSLPVNDRILREVATLSR 436
+ + +G G FG V K A+K ++ + L E + +
Sbjct: 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLK-AGYTEKQRVDFLGEAGIMGQ 65
Query: 437 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 496
H +++R + +
Sbjct: 66 FSHHNIIRLEGVISKYK----------------------------------------PMM 85
Query: 497 IQMEYCPRTLRQVF--ESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 554
I EY F E F + R I G+ ++ +HRDL NI ++
Sbjct: 86 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNS 145
Query: 555 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614
K+ DFGL++ L+ D + +G +TAPE K
Sbjct: 146 NLVCKVSDFGLSRVLE------------DDPEATYTTSGGKIPIRWTAPEAISYR-KFTS 192
Query: 615 KADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 671
+D++S GIV +E+ + V+ + G P+ + S L+ +
Sbjct: 193 ASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIND-GFRLPTPMDCPSAIYQLMMQCWQ 251
Query: 672 PSPSDRPSATELLQ 685
+ RP +++
Sbjct: 252 QERARRPKFADIVS 265
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 144 bits (363), Expect = 1e-38
Identities = 71/344 (20%), Positives = 120/344 (34%), Gaps = 85/344 (24%)
Query: 376 SSRYLNDFEELQPLGHGGFGHVVLCKN-KLDGRHYAVKKIRLKDKSLPVNDRILREVATL 434
R +E + +G G +G V ++ K GR A+K++R++ + +REVA L
Sbjct: 2 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 61
Query: 435 SRL---QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 491
L +H +VVR + DV
Sbjct: 62 RHLETFEHPNVVRLF-----------------------------------DVCTVSRTDR 86
Query: 492 STYLYIQMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 549
T L + E+ + L + E + Q++ GL +H ++HRDL P N
Sbjct: 87 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQN 146
Query: 550 IFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609
I + IK+ DFGLA+ + T V T +Y APE+
Sbjct: 147 ILVTSSGQIKLADFGLARIYSFQM----------------ALTSVVVTLWYRAPEVLLQS 190
Query: 610 PKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKG----------------- 649
D++S+G +F E++ F + + + L G
Sbjct: 191 S-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA 249
Query: 650 ------ELPPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQD 686
+ +V E + LL + ++ +P+ R SA L
Sbjct: 250 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 293
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 145 bits (366), Expect = 2e-38
Identities = 88/418 (21%), Positives = 150/418 (35%), Gaps = 120/418 (28%)
Query: 358 SQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK 417
+QF+ SV+ G ++ L ++ L+P+G G G V + + R+ A+KK+
Sbjct: 1 NQFY--SVEVGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 53
Query: 418 DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRA 477
++ R RE+ + + H++++ + +
Sbjct: 54 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLE--------------------- 92
Query: 478 ASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537
E +Y+ ME L QV + D E +L Q++ G+ H+H
Sbjct: 93 -------------EFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHS 137
Query: 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 597
GIIHRDL P+NI + +KI DFGLA+ + T V T
Sbjct: 138 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM----------------TPYVVT 181
Query: 598 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPS 654
+Y APE+ G E D++S+G + E+ F ++Q G P
Sbjct: 182 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 240
Query: 655 WVAKF---------------------------------------SEQESLLRRLMSPSPS 675
++ K S+ LL +++ P+
Sbjct: 241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 300
Query: 676 DRPSATELLQD-------------ALPPQMEYELLDNILRMMHSSED--TSIYDKVVS 718
R S + LQ A PPQ+ + LD H+ E+ IY +V++
Sbjct: 301 KRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDE---REHTIEEWKELIYKEVMN 355
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 145 bits (366), Expect = 2e-38
Identities = 70/337 (20%), Positives = 112/337 (33%), Gaps = 84/337 (24%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 440
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H+
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 441 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 500
+V+ DV LE +
Sbjct: 78 NVIGLL-----------------------------------DVFTPARSLEEFNDVYLVT 102
Query: 501 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 560
+ + L QI+ GL +IH IIHRDL P+N+ + ++KI
Sbjct: 103 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 162
Query: 561 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620
DFGLA+ E TG V T +Y APEI W ++ D++S
Sbjct: 163 LDFGLARHTDDEM------------------TGYVATRWYRAPEIMLNWMHYNQTVDIWS 204
Query: 621 LGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQES------------- 664
+G + EL F + L+ G + K S + +
Sbjct: 205 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKM 264
Query: 665 ---------------LLRRLMSPSPSDRPSATELLQD 686
LL +++ R +A + L
Sbjct: 265 NFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 301
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 144 bits (363), Expect = 4e-38
Identities = 74/391 (18%), Positives = 130/391 (33%), Gaps = 83/391 (21%)
Query: 355 SRVSQFWKPSVDSGSPNMSLPSSRY--LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK 412
V +F + + PS L+ F+ ++ LG G FG V+L K+K G HYA+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 413 KIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASS 471
+ + L + L E L + +V+ ++ +
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN------------------- 113
Query: 472 TFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEG 531
S + + F + A QIV
Sbjct: 114 --------------------SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 532 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG 591
++H +I+RDL P N+ D + I++ DFG AK +K
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT------------------ 195
Query: 592 TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQK 648
GT APEI ++ D ++LG++ +E+ PF QI + K
Sbjct: 196 WTLCGTPEALAPEIILSKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 649 GELPPSWVAKFSEQESLLRRLMSPSPSDR-----PSATELLQDALPPQMEYELLDN---- 699
P + S+ + LLR L+ + R ++ ++ +
Sbjct: 255 VRFPSHF---SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVE 311
Query: 700 --ILRMMHSSEDTSIYDKVVSSIFDEETLDM 728
+ DTS +D ++EE + +
Sbjct: 312 APFIPKFKGPGDTSNFDD-----YEEEEIRV 337
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 141 bits (355), Expect = 2e-37
Identities = 62/314 (19%), Positives = 100/314 (31%), Gaps = 45/314 (14%)
Query: 381 NDFEELQPLGHGGFGHVVLCK-----NKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 435
N + LG G FG VV AVK ++ L + ++ E+ LS
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-PSAHLTEREALMSELKVLS 81
Query: 436 RL-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 494
L H ++V A G + G L + R + T +
Sbjct: 82 YLGNHMNIVNLLGACTIGGPTLVITEYCCY-GDLLNFLRRKRDSFICSKTSPAIMEDDEL 140
Query: 495 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 554
D E Q+ +G+A + + IHRDL NI
Sbjct: 141 --------------------ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH 180
Query: 555 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614
KI DFGLA+ +K V + APE
Sbjct: 181 GRITKICDFGLARDIK-------------NDSNYVVKGNARLPVKWMAPESIFNCV-YTF 226
Query: 615 KADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 671
++D++S GI +EL+ M + ++G S +E +++
Sbjct: 227 ESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWD 286
Query: 672 PSPSDRPSATELLQ 685
P RP+ +++Q
Sbjct: 287 ADPLKRPTFKQIVQ 300
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (348), Expect = 1e-36
Identities = 60/336 (17%), Positives = 116/336 (34%), Gaps = 89/336 (26%)
Query: 386 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRY 445
+ +G G FG V + K G AVK +++ + E+ L+H++++ +
Sbjct: 8 QESIGKGRFGEV--WRGKWRGEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGF 62
Query: 446 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR- 504
A ++ T L++ +Y
Sbjct: 63 IAAD------------------------------------NKDNGTWTQLWLVSDYHEHG 86
Query: 505 TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ--------GIIHRDLTPNNIFFDARN 556
+L Y E L GLAH+H + I HRDL NI
Sbjct: 87 SLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG 145
Query: 557 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP-----K 611
I D GLA + T + + +VGT Y APE+ +
Sbjct: 146 TCCIADLGLAVR-----------HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE 194
Query: 612 IDEKADMYSLGIVFFELW-------------HPFSTAMERQIVLSDLKQ---KGELPPSW 655
++AD+Y++G+VF+E+ P+ + + ++++ + +L P+
Sbjct: 195 SFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNI 254
Query: 656 VAKFSEQES------LLRRLMSPSPSDRPSATELLQ 685
++ E+ ++R + + R +A + +
Sbjct: 255 PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 138 bits (348), Expect = 3e-36
Identities = 55/347 (15%), Positives = 110/347 (31%), Gaps = 103/347 (29%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-H 439
+D++ ++ LG G + V N + VK ++ K +I RE+ L L+
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK-----KKIKREIKILENLRGG 89
Query: 440 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 499
+++ + S +
Sbjct: 90 PNIITLADIVKDP--------------------------------------VSRTPALVF 111
Query: 500 EYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-D 557
E+ +Q++++ +I++ L + H GI+HRD+ P+N+ D +
Sbjct: 112 EHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK 168
Query: 558 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617
+++ D+GLA+F Q + +V + ++ PE+ + D D
Sbjct: 169 LRLIDWGLAEFYHPGQ----------------EYNVRVASRYFKGPELLVDYQMYDYSLD 212
Query: 618 MYSLGIVFFELW---HPFSTAMERQIVLSDL--------------KQKGELPPSWVAKFS 660
M+SLG + + PF + L + K EL P +
Sbjct: 213 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILG 272
Query: 661 EQE---------------------SLLRRLMSPSPSDRPSATELLQD 686
L +L+ R +A E ++
Sbjct: 273 RHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 319
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 131 bits (331), Expect = 2e-34
Identities = 62/316 (19%), Positives = 108/316 (34%), Gaps = 50/316 (15%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLS 435
+ + +PLG G FG V+ R AVK ++ + + + ++ E+ L
Sbjct: 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK-EGATHSEHRALMSELKILI 71
Query: 436 RLQHQH-VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 494
+ H VV A + G G L++ S R
Sbjct: 72 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR------------------ 113
Query: 495 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 554
E+ P + D E Q+ +G+ + + IHRDL NI
Sbjct: 114 ----NEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 169
Query: 555 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614
+N +KI DFGLA+ + V + APE
Sbjct: 170 KNVVKICDFGLARDI-------------YKDPDYVRKGDARLPLKWMAPETIFDRV-YTI 215
Query: 615 KADMYSLGIVFFEL----WHPFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRL 669
++D++S G++ +E+ P+ + LK+ + P + E +
Sbjct: 216 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDC 273
Query: 670 MSPSPSDRPSATELLQ 685
PS RP+ +EL++
Sbjct: 274 WHGEPSQRPTFSELVE 289
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 130 bits (327), Expect = 1e-33
Identities = 52/325 (16%), Positives = 91/325 (28%), Gaps = 77/325 (23%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLS 435
+ LG G FG V K A+K + + S+ L E + +
Sbjct: 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMK 78
Query: 436 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 495
HVVR +
Sbjct: 79 EFNCHHVVRLLGVVSQGQ----------------------------------------PT 98
Query: 496 YIQMEYCP-----------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 544
+ ME R + +I +G+A+++ +HRD
Sbjct: 99 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 158
Query: 545 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 604
L N +KIGDFG+ + + G + + +PE
Sbjct: 159 LAARNCMVAEDFTVKIGDFGMTRDI-------------YETDYYRKGGKGLLPVRWMSPE 205
Query: 605 IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELPPSWVAKFS 660
+ +D++S G+V +E+ P+ Q++ +G L
Sbjct: 206 SLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL--RFVMEGGLLDKPDNCPD 262
Query: 661 EQESLLRRLMSPSPSDRPSATELLQ 685
L+R +P RPS E++
Sbjct: 263 MLFELMRMCWQYNPKMRPSFLEIIS 287
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 128 bits (322), Expect = 3e-33
Identities = 56/351 (15%), Positives = 107/351 (30%), Gaps = 94/351 (26%)
Query: 381 NDFEELQPLGHGGFGHVVLCKNKLDGRH-------YAVKKIRLKDKSLPVNDRILREVAT 433
+ +PLG G FG VVL + + AVK ++ D + ++ E+
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-SDATEKDLSDLISEMEM 71
Query: 434 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLEST 493
+ + +
Sbjct: 72 MKMIGKHKNIINLLGACTQD---------------------------------------G 92
Query: 494 YLYIQMEYCPRT-----------------LRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536
LY+ +EY + + + Q+ G+ ++
Sbjct: 93 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA 152
Query: 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 596
+ IHRDL N+ N +KI DFGLA+ + T
Sbjct: 153 SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-------------HHIDYYKKTTNGRL 199
Query: 597 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP 652
+ APE ++D++S G++ +E++ P+ ++ L ++G
Sbjct: 200 PVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF--KLLKEGHRM 256
Query: 653 PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRM 703
+E ++R PS RP+ +L++D LD I+ +
Sbjct: 257 DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED----------LDRIVAL 297
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 105 bits (262), Expect = 8e-25
Identities = 64/361 (17%), Positives = 111/361 (30%), Gaps = 104/361 (28%)
Query: 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442
+ ++ LG G F V L K+ ++ H A+K +R + E+ L R+
Sbjct: 15 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVR---GDKVYTEAAEDEIKLLQRVNDADN 71
Query: 443 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 502
+ + D ++ + E
Sbjct: 72 TKEDSMGANHILKLLD-------------------------HFNHKGPNGVHVVMVFEVL 106
Query: 503 PRTLRQVFESYDHFDKEL--AWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARN--- 556
L + + Y+H L + +Q++ GL ++H + GIIH D+ P N+ + +
Sbjct: 107 GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPE 166
Query: 557 ---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613
IKI D G A + + T Y +PE+ G P
Sbjct: 167 NLIQIKIADLGNACWYDEHYTNSI------------------QTREYRSPEVLLGAP-WG 207
Query: 614 EKADMYSLGIVFFELW---HPF------STAMERQIVLSDLKQKGELPPSWVA------- 657
AD++S + FEL F S + + ++ GELP +
Sbjct: 208 CGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRT 267
Query: 658 ---------------------------KFSEQES-----LLRRLMSPSPSDRPSATELLQ 685
KFS+ E+ L ++ P R A L+
Sbjct: 268 FFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 327
Query: 686 D 686
Sbjct: 328 H 328
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 70.2 bits (171), Expect = 3e-14
Identities = 25/191 (13%), Positives = 49/191 (25%), Gaps = 52/191 (27%)
Query: 387 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL--------PVNDRILREVATLSRLQ 438
+ +G G V C ++ VK ++ S + +R +
Sbjct: 6 KLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNE 64
Query: 439 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 498
+ + + A +
Sbjct: 65 FRALQKLQGLAVPKVYAWEGN------------------------------------AVL 88
Query: 499 MEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 558
ME + E + I+E +A + +GI+H DL+ N+ I
Sbjct: 89 MELID------AKELYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGI 141
Query: 559 KIGDFGLAKFL 569
I DF + +
Sbjct: 142 WIIDFPQSVEV 152
|
| >d1usya_ d.104.1.1 (A:) ATP phosphoribosyltransferase regulatory subunit HisZ {Thermotoga maritima [TaxId: 2336]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: ATP phosphoribosyltransferase regulatory subunit HisZ species: Thermotoga maritima [TaxId: 2336]
Score = 60.6 bits (146), Expect = 2e-10
Identities = 36/249 (14%), Positives = 74/249 (29%), Gaps = 35/249 (14%)
Query: 798 HGGDLLELSHELRLPFIRWAISNQKSS-FKRYEISSVYRRAIGHSPPNRYLQGDFDIIGG 856
G+L + + + S K + VYR + S Q + +
Sbjct: 43 RKGNLFSIREDFTKTVLNHRKRYSPDSQIKVWYADFVYRYS--GSDLVAEYQLGLEKVPR 100
Query: 857 ASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMM 916
S EVL++ ++ + FF + + H + E + + EKV L+
Sbjct: 101 NSLDDSLEVLEIIVESASEFFE-GPVIVEIGHTGVYEDLLKEIPK--DLHEKVLNLI--- 154
Query: 917 GSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPAD 976
+K + L + + V ++ + + P +
Sbjct: 155 ----------DTKNLAEIEFLSHMKKIDLSRVEKI------IEDSIYRRSPEHLKTMDLP 198
Query: 977 KPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLL 1034
R+ L +L+ ++ ID + + L F ++ +
Sbjct: 199 LSVREDLLSASSFLQEKFPTVSVEIDLTLARTIEEYCGLIFTIYDTSSSRL--------V 250
Query: 1035 AVGGRYDYL 1043
A GG Y
Sbjct: 251 AAGGEYTVN 259
|
| >d1ukxa_ d.20.1.3 (A:) EIF2-alpha kinase 4 (GCN2-like protein) {Mouse (Mus musculus) [TaxId: 10090]} Length = 137 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: RWD domain domain: EIF2-alpha kinase 4 (GCN2-like protein) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 55.4 bits (133), Expect = 1e-09
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 23 HSSSTVDDNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAR 82
+ + + E+ C P YP P++ + KGL+ + L L++ A
Sbjct: 52 YPQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKNAKGLSNESVNLLKSHLEELAKKQC- 110
Query: 83 EGRVMIFNLVEAAQEFLSE 101
G VMIF L Q FLSE
Sbjct: 111 -GEVMIFELAHHVQSFLSE 128
|
| >d2daya1 d.20.1.3 (A:8-122) E3 ubiquitin-protein ligase RNF25 {Human (Homo sapiens) [TaxId: 9606]} Length = 115 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: RWD domain domain: E3 ubiquitin-protein ligase RNF25 species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.4 bits (128), Expect = 4e-09
Identities = 16/76 (21%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 24 SSSTVDDNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNARE 83
+++ D++ + + YP++ P++ I +GL+ +L +L A +
Sbjct: 42 ATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNPRGLSDEQIHTILQVLGHVAKAGL-- 99
Query: 84 GRVMIFNLVEAAQEFL 99
G M++ L+E +E L
Sbjct: 100 GTAMLYELIEKGKEIL 115
|
| >d1h4vb2 d.104.1.1 (B:2-325) Histidyl-tRNA synthetase (HisRS) {Thermus thermophilus [TaxId: 274]} Length = 324 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Histidyl-tRNA synthetase (HisRS) species: Thermus thermophilus [TaxId: 274]
Score = 54.2 bits (129), Expect = 4e-08
Identities = 38/339 (11%), Positives = 88/339 (25%), Gaps = 53/339 (15%)
Query: 751 DTELRDYVVQVTKEMFRQHCAKHLE---IEPMYLLG-----DCPQFKRNTVKLLTHGGDL 802
+ + +V +++ A L E + ++ GG
Sbjct: 15 ELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAATDIVRKEMFTFQDRGGRS 74
Query: 803 LELSHELRLPFIRWAISNQKSS-----FKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGA 857
L L E +R + + ++ Q +++ +G
Sbjct: 75 LTLRPEGTAAMVRAYLEHGMKVWPQPVRLWMAGPMFRAERPQKGRYRQFHQVNYEALGSE 134
Query: 858 SALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMG 917
+ + +AE + + + + + + L+ E + E E L+
Sbjct: 135 NPILDAEAVVLLYECL-KELGLRRLKVKLSSVGDPEDRARYNAYLREVLSPHREALSEDS 193
Query: 918 SLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADK 977
R + + + R + + + L +
Sbjct: 194 KERLEENPMRILDSKSERD---------------------QALLKELGVRPMLDFLGEEA 232
Query: 978 PTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVG 1037
E +L + ++ + Y+ F+V + + L G
Sbjct: 233 RAHLKEVERHLERLSV--PYELEPALVRGLDYYVRTAFEVHH------EEIGAQSALGGG 284
Query: 1038 GRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQ 1076
GRYD L + GVG + +E +
Sbjct: 285 GRYDGLSELLGGPRV----------PGVGFAFGVERVAL 313
|
| >d1wu7a2 d.104.1.1 (A:3-329) Histidyl-tRNA synthetase (HisRS) {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 327 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Histidyl-tRNA synthetase (HisRS) species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 53.6 bits (127), Expect = 7e-08
Identities = 48/333 (14%), Positives = 99/333 (29%), Gaps = 41/333 (12%)
Query: 751 DTELRDYVVQVTKEMFRQHCAKHLE---IEP--MYLLGDCPQFKRNTVKLLTHGGDLLEL 805
D ++ ++ + +E + ++ +E +Y + + + T + GG + L
Sbjct: 17 DMDVEKFIFKTAEEAAEAFGFRRIDFPSLEYLDLYRIKSGEELLQQTYSFVDKGGREVTL 76
Query: 806 SHELRLPFIRWAISNQ---KSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALTE 862
E +R S + + + Q + DI G S +
Sbjct: 77 IPEATPSTVRMVTSRKDLQRPLRWYSFPKVWRYEEPQAGRYREHYQFNADIFGSDSPEAD 136
Query: 863 AEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQ 922
AEV+ + I+ R + +I +N ++E I G+ + V + +
Sbjct: 137 AEVIALASSILDRLGLQDIYEIRINSRKIMEEII--GGMTSSDPFSV-FSIIDRYHKISR 193
Query: 923 SSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKA 982
+ + R R G + + + R+
Sbjct: 194 EEFVDQLRSAGIGEDGVSMIADLCSGTRGIDEMARITGKSSEEIARMAAVEDL------- 246
Query: 983 LDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDY 1042
L ++ R D + SY+ + F+ + ++ A + GGRYD
Sbjct: 247 LASYGVKNVRY------DFSIVRGLSYYTGIVFEAYDRSGQFRA-------ILGGGRYDN 293
Query: 1043 LLHRMWDREYVGYASRTNPPSGVGASLALETII 1075
L M VG + I
Sbjct: 294 LASLMSGESV----------PAVGFGMGDAVIS 316
|
| >d1qe0a2 d.104.1.1 (A:1-325) Histidyl-tRNA synthetase (HisRS) {Staphylococcus aureus [TaxId: 1280]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Histidyl-tRNA synthetase (HisRS) species: Staphylococcus aureus [TaxId: 1280]
Score = 46.5 bits (109), Expect = 1e-05
Identities = 48/344 (13%), Positives = 99/344 (28%), Gaps = 53/344 (15%)
Query: 747 YSDLDTELRDYVVQVTKEMFRQHCAKHLE---IEPMYLLG-----DCPQFKRNTVKLLTH 798
D++ Y+ E+ + K + E L ++
Sbjct: 11 ILPEDSKKWRYIENQLDELMTFYNYKEIRTPIFESTDLFARGVGDSTDVVQKEMYTFKDK 70
Query: 799 GGDLLELSHELRLPFIRWAISN-----QKSSFKRYEISSVYRRAIGHSPPNR-YLQGDFD 852
G + L E +R I + K Y ++R R + Q +
Sbjct: 71 GDRSITLRPEGTAAVVRSYIEHKMQGNPNQPIKLYYNGPMFRYERKQKGRYRQFNQFGVE 130
Query: 853 IIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAEL 912
IG + +AEVL + M I F + +N + + + +H E V
Sbjct: 131 AIGAENPSVDAEVLAMVMHIYQSFGLKH-LKLVINSVGDMASRKEYNEALVKHFEPVIHE 189
Query: 913 LAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGA 972
R + R L +++ + + + + +++
Sbjct: 190 FCSDCQSRLHTDPM--------RILDCKVDRDKEAIKTAPRITDFLNEESKAYYEQVKAY 241
Query: 973 LPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGT 1032
L + D + Y+ + F++ Y +
Sbjct: 242 LDD-----------------LGIPYTEDPNLVRGLDYYTHTAFELMMDNPNYDGAITT-- 282
Query: 1033 LLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQ 1076
L GGRY+ LL + +G+G +L++E ++
Sbjct: 283 -LCGGGRYNGLLELLDGPSE----------TGIGFALSIERLLL 315
|
| >d1kmma2 d.104.1.1 (A:4-325) Histidyl-tRNA synthetase (HisRS) {Escherichia coli [TaxId: 562]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Histidyl-tRNA synthetase (HisRS) species: Escherichia coli [TaxId: 562]
Score = 45.0 bits (105), Expect = 4e-05
Identities = 50/338 (14%), Positives = 96/338 (28%), Gaps = 53/338 (15%)
Query: 751 DTELRDYVVQVTKEMFRQHCAKHLE---IEPMYLLG-----DCPQFKRNTVKLLTHGGDL 802
+T + + K + + + +E L ++ GD
Sbjct: 15 ETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTFEDRNGDS 74
Query: 803 LELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSP----PNRYLQGDFDIIGGAS 858
L L E +R I + + + + P ++ Q ++ G
Sbjct: 75 LTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQFHQLGCEVFGLQG 134
Query: 859 ALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGS 918
+AE++ +T +E + LN LEA ++ E+ E L
Sbjct: 135 PDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARANYRDALVAFLEQHKEKL----- 189
Query: 919 LRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKP 978
+ K + ++L N A P L L +
Sbjct: 190 ----DEDCKRRMYTNPLRVLDSKN--------------PEVQALLNDAPALGDYLDEESR 231
Query: 979 TRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGG 1038
A L I ++ + Y+ F+ + T+ GG
Sbjct: 232 EHFAGLCKLLESAGI--AYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTV------CAGG 283
Query: 1039 RYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQ 1076
RYD L+ ++ R VG ++ LE ++
Sbjct: 284 RYDGLVEQLGGRAT----------PAVGFAMGLERLVL 311
|
| >d2daxa1 d.20.1.3 (A:8-147) Uncharacterized protein C21orf6 {Human (Homo sapiens) [TaxId: 9606]} Length = 140 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: RWD domain domain: Uncharacterized protein C21orf6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.9 bits (95), Expect = 2e-04
Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 2/81 (2%)
Query: 23 HSSSTVDDNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAR 82
+ + V D ++ + + YP P++ + L++S L L +
Sbjct: 55 NMNLDVSDEKMAMFSLACILPFKYPAVLPEITV-RSVLLSRSQQTQLNTDLTAFLQKHCH 113
Query: 83 EGRVMIFNLVEAAQEFLSEIV 103
G V I N E +E S V
Sbjct: 114 -GDVCILNATEWVREHASGYV 133
|
| >d1z7ma1 d.104.1.1 (A:6-323) ATP phosphoribosyltransferase regulatory subunit HisZ {Lactococcus lactis [TaxId: 1358]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: ATP phosphoribosyltransferase regulatory subunit HisZ species: Lactococcus lactis [TaxId: 1358]
Score = 42.7 bits (99), Expect = 2e-04
Identities = 44/336 (13%), Positives = 99/336 (29%), Gaps = 48/336 (14%)
Query: 751 DTELRDYVVQVTKEMFRQHCAKHLE---IEPMYLL-----GDCPQFKRNTVKLLTHGGDL 802
+ + +++F + + E L + + + H G
Sbjct: 14 QVKSLRQIEGRLRKLFSLKNYQEVMPPSFEYTQLYTALESNGKTFNQEKMFQFIKHEGQS 73
Query: 803 LELSHELRLPFIRWAISNQKSSFKRYEISSVYRRA--IGHSPPNRYLQGDFDIIGGASAL 860
+ L ++ LP +R + S+ RY R Q ++ G ++
Sbjct: 74 ITLRYDFTLPLVRLYSQIKDSTSARYSYFGKIFRKEKRHKGRSTENYQIGIELFGESADK 133
Query: 861 TEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLR 920
+E E+L + + ++ + + + + + A E ++ L
Sbjct: 134 SELEILSLALQVIEQLGLNK-TVFEIGSAKFFQRLCQLADGSTELLTEL---LLKKDLSG 189
Query: 921 PQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTR 980
+ K+ + R LL+ + + + + + +
Sbjct: 190 LNAFIEKNNFSKELRGLLK------------EIFITNELSRLENLVTNTKDDVLISSFDQ 237
Query: 981 KALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRY 1040
L + + D M P Y+ +L F+ +S P + GGRY
Sbjct: 238 LKEFSEKLSMIKPIII---DLGMVPKMDYYTDLMFKAYSSAANQP--------ILSGGRY 286
Query: 1041 DYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQ 1076
D LL +G ++TI++
Sbjct: 287 DQLLSNF-----------QEEAFAIGFCCHMDTILK 311
|
| >d2dawa1 d.20.1.3 (A:8-148) RWD domain-containing protein 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 141 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: RWD domain domain: RWD domain-containing protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.9 bits (90), Expect = 8e-04
Identities = 9/74 (12%), Positives = 22/74 (29%), Gaps = 2/74 (2%)
Query: 30 DNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIF 89
+ + ++ YPY +L L + L L + G + +
Sbjct: 64 EEPKVKIDLQVTMPHSYPYLALQLFGR-SSELDRHQQLLLNKGLTSYIGTFDP-GELCVC 121
Query: 90 NLVEAAQEFLSEIV 103
++ Q+ +
Sbjct: 122 AAIQWLQDNSASYF 135
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1196 | |||
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1wu7a2 | 327 | Histidyl-tRNA synthetase (HisRS) {Archaeon Thermop | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1z7ma1 | 318 | ATP phosphoribosyltransferase regulatory subunit H | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1h4vb2 | 324 | Histidyl-tRNA synthetase (HisRS) {Thermus thermoph | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1qe0a2 | 325 | Histidyl-tRNA synthetase (HisRS) {Staphylococcus a | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1kmma2 | 322 | Histidyl-tRNA synthetase (HisRS) {Escherichia coli | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1usya_ | 275 | ATP phosphoribosyltransferase regulatory subunit H | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.84 | |
| d1kmma1 | 99 | Histidyl-tRNA synthetase (HisRS), C-terminal domai | 99.53 | |
| d1wu7a1 | 97 | Histidyl-tRNA synthetase (HisRS), C-terminal domai | 99.5 | |
| d1qf6a1 | 110 | Threonyl-tRNA synthetase (ThrRS), C-terminal domai | 99.48 | |
| d1h4vb1 | 96 | Histidyl-tRNA synthetase (HisRS), C-terminal domai | 99.48 | |
| d1qe0a1 | 95 | Histidyl-tRNA synthetase (HisRS), C-terminal domai | 99.47 | |
| d1nyra1 | 113 | Threonyl-tRNA synthetase (ThrRS), C-terminal domai | 99.43 | |
| d2daya1 | 115 | E3 ubiquitin-protein ligase RNF25 {Human (Homo sap | 99.36 | |
| d1ukxa_ | 137 | EIF2-alpha kinase 4 (GCN2-like protein) {Mouse (Mu | 99.24 | |
| d1nj1a1 | 127 | Prolyl-tRNA synthetase (ProRS) domain {Arhaeon (Me | 99.23 | |
| d1qf6a4 | 291 | Threonyl-tRNA synthetase (ThrRS) {Escherichia coli | 99.22 | |
| d1nj8a3 | 268 | Prolyl-tRNA synthetase (ProRS) {Archaeon (Methanoc | 99.2 | |
| d1nyra4 | 291 | Threonyl-tRNA synthetase (ThrRS) {Staphylococcus a | 99.18 | |
| d1g5ha1 | 127 | The aaRS-like accessory subunit of mitochondrial p | 99.17 | |
| d1nj8a1 | 126 | Prolyl-tRNA synthetase (ProRS) domain {Archaeon (M | 99.09 | |
| d1atia1 | 111 | Glycyl-tRNA synthetase (GlyRS), C-terminal domain | 99.06 | |
| d1b76a2 | 331 | Glycyl-tRNA synthetase (GlyRS) {Thermus thermophil | 98.98 | |
| d1hc7a1 | 127 | Prolyl-tRNA synthetase (ProRS) domain {Thermus the | 98.94 | |
| d1nj1a3 | 265 | Prolyl-tRNA synthetase (ProRS) {Arhaeon (Methanoth | 98.94 | |
| d1hc7a2 | 272 | Prolyl-tRNA synthetase (ProRS) {Thermus thermophil | 98.86 | |
| d2daxa1 | 140 | Uncharacterized protein C21orf6 {Human (Homo sapie | 98.76 | |
| d2dawa1 | 141 | RWD domain-containing protein 2 {Human (Homo sapie | 98.59 | |
| d1e1oa2 | 342 | Lysyl-tRNA synthetase (LysRS) {Escherichia coli, g | 98.04 | |
| d1g5ha2 | 290 | The aaRS-like accessory subunit of mitochondrial p | 98.03 | |
| d1seta2 | 311 | Seryl-tRNA synthetase (SerRS) {Thermus thermophilu | 97.75 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 97.58 | |
| d1atia2 | 394 | Glycyl-tRNA synthetase (GlyRS) {Thermus thermophil | 97.41 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.31 | |
| d1jjca_ | 266 | Phenyl-tRNA synthetase (PheRS) alpha subunit, PheS | 97.18 | |
| d1c0aa3 | 346 | Aspartyl-tRNA synthetase (AspRS) {Escherichia coli | 97.16 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 96.96 | |
| d1eova2 | 353 | Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (S | 96.8 | |
| d1l0wa3 | 356 | Aspartyl-tRNA synthetase (AspRS) {Thermus thermoph | 96.73 | |
| d1b8aa2 | 335 | Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococ | 96.73 | |
| d1nnha_ | 293 | Hypothetical protein PF1951 {Archaeon Pyrococcus f | 96.68 | |
| d1n9wa2 | 304 | Aspartyl-tRNA synthetase (AspRS) {Thermus thermoph | 95.85 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 95.5 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 94.73 | |
| d1v95a_ | 130 | Nuclear receptor coactivator 5 (KIAA1637) {Human ( | 94.7 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 92.49 | |
| d1jjcb5 | 207 | Phenyl-tRNA synthetase (PheRS) beta subunit, PheT, | 91.59 |
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-51 Score=460.60 Aligned_cols=260 Identities=28% Similarity=0.481 Sum_probs=218.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
++++|++++.||+|+||+||+|+++.+|+.||||+++.... ....+++.+|+.+|+.++|||||++++++.+
T Consensus 3 f~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~------- 74 (271)
T d1nvra_ 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRRE------- 74 (271)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHTCCCTTBCCEEEEEEE-------
T ss_pred CCcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc-chHHHHHHHHHHHHHhCCCCCEeeEeeeecc-------
Confidence 56899999999999999999999999999999999975432 2334578999999999999999999998843
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|||||||+| +|.+++.....+++.+++.++.||++||+|||+
T Consensus 75 ---------------------------------~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~ 121 (271)
T d1nvra_ 75 ---------------------------------GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 121 (271)
T ss_dssp ---------------------------------TTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CceeEEEEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4578999999974 999999888899999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++++||+|||+|+....... ....+..+||+.|||||++.+...++.++|
T Consensus 122 ~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~-------------~~~~~~~~GT~~Y~APE~~~~~~~~~~~~D 188 (271)
T d1nvra_ 122 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-------------ERLLNKMCGTLPYVAPELLKRREFHAEPVD 188 (271)
T ss_dssp TTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTE-------------ECCBCCCCSCGGGSCTHHHHCSSBCHHHHH
T ss_pred cCCccCcccHHHEEECCCCCEEEccchhheeeccCCc-------------cccccceeeCcCccCHhHhcCCCCCCCcee
Confidence 9999999999999999999999999999987643221 112345689999999999988554578999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||||||+||||++ ||...................++.+...++++.+||++||+.||.+|||++++|+||||++.
T Consensus 189 iwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~ 266 (271)
T d1nvra_ 189 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 266 (271)
T ss_dssp HHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred eeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCcC
Confidence 9999999999997 88655444344444444555555667788999999999999999999999999999999753
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-50 Score=447.11 Aligned_cols=250 Identities=29% Similarity=0.497 Sum_probs=215.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+++|++.+.||+|+||+||+|+++.+|+.||||++..... .......+.+|+.+|+.++|||||+++++|.+
T Consensus 5 l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~------- 77 (263)
T d2j4za1 5 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD------- 77 (263)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------
T ss_pred hhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEE-------
Confidence 5799999999999999999999999999999999874321 12235678899999999999999999998832
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|||||||+ |+|.+++.....+++..++.++.||+.||+|||+
T Consensus 78 ---------------------------------~~~~~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~ 124 (263)
T d2j4za1 78 ---------------------------------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 124 (263)
T ss_dssp ---------------------------------SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 457899999997 5999999998999999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++++||+|||+|+..... .....+||+.|||||++.+ ..|+.++|
T Consensus 125 ~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~-----------------~~~~~~Gt~~Y~APE~~~~-~~~~~~~D 186 (263)
T d2j4za1 125 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----------------RRTTLCGTLDYLPPEMIEG-RMHDEKVD 186 (263)
T ss_dssp TTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC-----------------CCEETTEEGGGCCHHHHTT-CCCCTTHH
T ss_pred CCeeeeeeccccceecCCCCEeecccceeeecCCC-----------------cccccCCCCcccCHHHHcC-CCCCchhh
Confidence 99999999999999999999999999999754311 1234589999999999998 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
||||||+||||++ ||......+....+......+|. ..++++++||.+||+.||.+|||++++|+||||.
T Consensus 187 iwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~ 259 (263)
T d2j4za1 187 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 259 (263)
T ss_dssp HHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHH
T ss_pred hhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCc---cCCHHHHHHHHHHccCCHhHCcCHHHHHcCcCcC
Confidence 9999999999997 88877666665555544444443 4567999999999999999999999999999875
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-49 Score=443.02 Aligned_cols=253 Identities=24% Similarity=0.382 Sum_probs=213.7
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCc
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 462 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~ 462 (1196)
|++.++||+|+||+||+|+++.+++.||+|++..........+.+.+|+++|++++|||||+++++|....
T Consensus 11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--------- 81 (270)
T d1t4ha_ 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV--------- 81 (270)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES---------
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeecc---------
Confidence 46778899999999999999999999999999876656566678999999999999999999999984321
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC--
Q 000993 463 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG-- 539 (1196)
Q Consensus 463 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g-- 539 (1196)
.....+|+|||||+ |+|.+++.+...+++..++.++.||++||+|||+++
T Consensus 82 ---------------------------~~~~~~~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~ 134 (270)
T d1t4ha_ 82 ---------------------------KGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPP 134 (270)
T ss_dssp ---------------------------SSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSC
T ss_pred ---------------------------ccCCEEEEEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 12467899999997 599999999899999999999999999999999999
Q ss_pred CcccCCCcCcEEecC-CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 540 IIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 540 IiHrDLKp~NILld~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
|+||||||+|||++. ++.+||+|||+|+..... ...+.+||+.|||||++.+ .|+.++||
T Consensus 135 IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~-----------------~~~~~~GT~~Y~aPE~~~~--~~~~~~DI 195 (270)
T d1t4ha_ 135 IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-----------------FAKAVIGTPEFMAPEMYEE--KYDESVDV 195 (270)
T ss_dssp CCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT-----------------SBEESCSSCCCCCGGGGGT--CCCTHHHH
T ss_pred EEeCCcChhhceeeCCCCCEEEeecCcceeccCC-----------------ccCCcccCccccCHHHhCC--CCCCcCch
Confidence 999999999999974 789999999999753211 1234689999999999986 48999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
|||||+||||++ ||............+......+......++++++||.+||+.||++|||++|+|+||||+
T Consensus 196 wSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk 270 (270)
T d1t4ha_ 196 YAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 270 (270)
T ss_dssp HHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred hhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence 999999999997 887665555444444433332333445678999999999999999999999999999985
|
| >d1wu7a2 d.104.1.1 (A:3-329) Histidyl-tRNA synthetase (HisRS) {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Histidyl-tRNA synthetase (HisRS) species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=2.8e-49 Score=453.28 Aligned_cols=307 Identities=16% Similarity=0.199 Sum_probs=249.4
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-CcccccceEEEeecCCceEeecCCCcHHH
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPF 813 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~i 813 (1196)
+.++|++|++|.++..++++++.++++|++|||++|.||+| .+... +++..++||+|.|++|+.++||||+|+|+
T Consensus 5 ~~~~G~~D~~p~~~~~~~~i~~~l~~~f~~~Gy~~I~tP~lE~~d~~~~~~g~~~~~~~~~f~D~~g~~l~LRpD~T~~i 84 (327)
T d1wu7a2 5 EKIRGFRDFYPEDMDVEKFIFKTAEEAAEAFGFRRIDFPSLEYLDLYRIKSGEELLQQTYSFVDKGGREVTLIPEATPST 84 (327)
T ss_dssp CCCTTCCCBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEETHHHHTTSCTTGGGGSCEEECTTSCEEEECSCSHHHH
T ss_pred CCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCeEeECCccchHhhccccCchhHHHHHhhhhcccchhhcccccccchh
Confidence 56899999999999999999999999999999999999999 33334 78889999999999999999999999999
Q ss_pred HHHHHhCC--CCceeEEEecCeeecCCCCCCC-cceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEeCcHH
Q 000993 814 IRWAISNQ--KSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGD 890 (1196)
Q Consensus 814 aR~~a~~~--~~P~r~~Y~G~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~~~ 890 (1196)
||+++++. ..|+|+||+|+|||+++++.++ +||+|+|+|+||..+..+|+|+|.++.++|+.+|+.+.+.|.|||+.
T Consensus 85 ar~~~~~~~~~~p~k~~y~g~VfR~~~~~~g~~re~~Q~G~EiiG~~~~~~D~Eii~l~~~~l~~~~~~~~~~i~l~~~~ 164 (327)
T d1wu7a2 85 VRMVTSRKDLQRPLRWYSFPKVWRYEEPQAGRYREHYQFNADIFGSDSPEADAEVIALASSILDRLGLQDIYEIRINSRK 164 (327)
T ss_dssp HHHHTTCTTCCSSEEEEECCEEECCCCSCSSCCSEEEEEEEEEESCCSHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHH
T ss_pred hhHhhhhhhccccceeeccCcceeccccccCCcchhhhhhhhhcCCcchHHHHHHHHHHHHHHhccccccceeecccchh
Confidence 99988754 4599999999999998888655 46999999999999999999999999999999999656899999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHHHh
Q 000993 891 LLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLR 970 (1196)
Q Consensus 891 i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~ 970 (1196)
+++.+++.++.+.. ..+...++++++. ....+.+++ ...+...+....+..+.. .. ..++.+.
T Consensus 165 i~~~~l~~l~~~~~--~~~~~~~~~~~~~---------~~~~~~~~l-~~~~~~~~~~~~l~~~~~-~~----~~l~~~~ 227 (327)
T d1wu7a2 165 IMEEIIGGMTSSDP--FSVFSIIDRYHKI---------SREEFVDQL-RSAGIGEDGVSMIADLCS-GT----RGIDEMA 227 (327)
T ss_dssp HHHHHHHTTCSSCH--HHHHHHHHTTTTS---------CHHHHHHHH-HHTTCCHHHHHHHHHHHH-SC----BCHHHHH
T ss_pred hHHHHHHhhhhhHH--HHHHHHHHHHHhh---------ccchhhhhh-hhhhhhhHHHhhhhhhcc-cc----hhhhHHH
Confidence 99999998877643 3445566666643 334443333 335666666666666652 11 2233344
Q ss_pred ccCCCChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchhhhhcc
Q 000993 971 GALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMW 1048 (1196)
Q Consensus 971 ~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg 1048 (1196)
..........+.++.+ .+..+++ +.|.||++++|+++||||+||++|..+.. ..+||+|||||+|++.||
T Consensus 228 ~~~~~~~~~~~~l~~l~~~l~~~~~-~~i~~D~~~~r~~~YYtGivFe~~~~~~~-------~~~i~~GGRYD~L~~~f~ 299 (327)
T d1wu7a2 228 RITGKSSEEIARMAAVEDLLASYGV-KNVRYDFSIVRGLSYYTGIVFEAYDRSGQ-------FRAILGGGRYDNLASLMS 299 (327)
T ss_dssp HHTTCCCHHHHHHHHHHHHHHHTTC-CCCEECTTCCTTTTTCSSEEEEEEETTSS-------CSCSSEEEECTTHHHHHH
T ss_pred hhhchhhhHHHHHHHHHHHHHhcCC-cceeEccccCCCCCCcCCeEEEEEecCCC-------cceeeecccchHHHHhcC
Confidence 3344445555666666 7788887 46999999999999999999999986422 237999999999999996
Q ss_pred ccccccccCCCCCCCcceecccHHHHHhhccC
Q 000993 1049 DREYVGYASRTNPPSGVGASLALETIIQHYPV 1080 (1196)
Q Consensus 1049 ~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~ 1080 (1196)
++ ++||||||+++|||+.+|++
T Consensus 300 g~----------~~pAvGfsl~~~~l~~~l~~ 321 (327)
T d1wu7a2 300 GE----------SVPAVGFGMGDAVISLLLKR 321 (327)
T ss_dssp SC----------CCCEEEEEEEHHHHHHHHHH
T ss_pred CC----------CCCeEEEEeeHHHHHHHHHh
Confidence 53 46999999999999998873
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-49 Score=443.92 Aligned_cols=254 Identities=30% Similarity=0.545 Sum_probs=206.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++++.||+|+||+||+|+++.+|+.||||+++....+....+.+.+|+.+|+.++|||||+++++|.+.
T Consensus 3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~------- 75 (269)
T d2java1 3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR------- 75 (269)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC--------
T ss_pred chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeC-------
Confidence 4799999999999999999999999999999999987666666667899999999999999999999988542
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
....+|||||||+ |+|.+++.. ...+++..++.++.||+.||+|
T Consensus 76 -------------------------------~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~y 124 (269)
T d2java1 76 -------------------------------TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 124 (269)
T ss_dssp ----------------------------------CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------CCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHH
Confidence 2346899999997 599998864 4579999999999999999999
Q ss_pred HHhCC-----CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 535 IHGQG-----IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 535 LHs~g-----IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
||++| |+||||||+||||+.++.+||+|||+|+.+.... ...++.+||+.|||||++.+
T Consensus 125 lH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~---------------~~~~~~~gt~~Y~APE~l~~- 188 (269)
T d2java1 125 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT---------------SFAKAFVGTPYYMSPEQMNR- 188 (269)
T ss_dssp HHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC--------------------------CCCSCCCHHHHTT-
T ss_pred HHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecccCC---------------CccccCCCCcccCCHHHHcC-
Confidence 99976 9999999999999999999999999998764321 11245689999999999987
Q ss_pred CCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 610 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 610 ~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
..|+.++|||||||++|||++ ||......+....+.. ...++.+...++++.+||++||+.||.+|||+.++++|
T Consensus 189 ~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~h 266 (269)
T d2java1 189 MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE--GKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN 266 (269)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH--TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHc--CCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 579999999999999999997 8887666555444433 33334445677899999999999999999999999999
Q ss_pred cCC
Q 000993 687 ALP 689 (1196)
Q Consensus 687 ~~~ 689 (1196)
||.
T Consensus 267 p~i 269 (269)
T d2java1 267 PLI 269 (269)
T ss_dssp TTC
T ss_pred CcC
Confidence 984
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-49 Score=447.01 Aligned_cols=262 Identities=24% Similarity=0.350 Sum_probs=219.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
+.|++++.||+|+||+||+|+++.+|+.||||+++... ....+.+.+|+.+|+.++|||||+++++|.+
T Consensus 12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~--------- 80 (288)
T d2jfla1 12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS--EEELEDYMVEIDILASCDHPNIVKLLDAFYY--------- 80 (288)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSS--SGGGGGTHHHHHHHHHCCCTTBCCEEEEEEE---------
T ss_pred cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEee---------
Confidence 56899999999999999999999999999999997543 3345678999999999999999999998843
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+|||||+ |+|.+++.. ...+++.+++.++.||+.||+|||++
T Consensus 81 -------------------------------~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~ 129 (288)
T d2jfla1 81 -------------------------------ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 129 (288)
T ss_dssp -------------------------------TTEEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -------------------------------CCeEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 457899999997 589988765 45699999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC----CCCCCC
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKIDE 614 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~s~ 614 (1196)
||+||||||+|||++.++++||+|||+|+...... ....+.+||+.|||||++.+ ...|+.
T Consensus 130 ~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~---------------~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~ 194 (288)
T d2jfla1 130 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI---------------QRRDSFIGTPYWMAPEVVMCETSKDRPYDY 194 (288)
T ss_dssp TEECCCCSGGGEEECTTSCEEECCCTTCEECHHHH---------------HHHTCCCSCCTTCCHHHHTTCSTTTSSTTT
T ss_pred CEEEeecChhheeECCCCCEEEEechhhhccCCCc---------------ccccccccccccCCHHHHhhcccCCCCCCh
Confidence 99999999999999999999999999997653221 01234689999999999853 245899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
++|||||||+||||++ ||......+....+........+.+...++++++||++||+.||.+|||+.++++|||+..
T Consensus 195 k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~ 274 (288)
T d2jfla1 195 KADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV 274 (288)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCC
T ss_pred hhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence 9999999999999996 8887776666666655444444455677889999999999999999999999999999986
Q ss_pred chHHHHHH
Q 000993 692 MEYELLDN 699 (1196)
Q Consensus 692 ~~~~~~~~ 699 (1196)
.....++.
T Consensus 275 ~~~~p~~~ 282 (288)
T d2jfla1 275 DSNKPIRE 282 (288)
T ss_dssp CCCHHHHH
T ss_pred CCCCCcHH
Confidence 54443433
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-49 Score=447.57 Aligned_cols=252 Identities=22% Similarity=0.390 Sum_probs=215.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|+++++||+|+||+||+|+++.+|+.||||+++..... ..+.+.+|+.+|+.++|||||+++++|.+
T Consensus 20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~HpnIv~~~~~~~~--------- 88 (293)
T d1yhwa1 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLV--------- 88 (293)
T ss_dssp TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHHCCCTTBCCEEEEEEE---------
T ss_pred cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccCh--HHHHHHHHHHHHHhCCCCCEeeEeEEEEE---------
Confidence 5799999999999999999999999999999999865433 34679999999999999999999998843
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
..++|||||||+ |+|.+++.. ..+++.+++.++.||+.||+|||++|
T Consensus 89 -------------------------------~~~~~ivmEy~~gg~L~~~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~ 136 (293)
T d1yhwa1 89 -------------------------------GDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ 136 (293)
T ss_dssp -------------------------------TTEEEEEEECCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -------------------------------CCEEEEEEEecCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 457899999997 588887654 57999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+|||++.++++||+|||+|+.+.... ......+||+.|||||++.+ ..|+.++|||
T Consensus 137 iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~---------------~~~~~~~gt~~Y~aPE~~~~-~~~~~~~Diw 200 (293)
T d1yhwa1 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---------------SKRSTMVGTPYWMAPEVVTR-KAYGPKVDIW 200 (293)
T ss_dssp EECCCCSGGGEEECTTCCEEECCCTTCEECCSTT---------------CCBCCCCSCGGGCCHHHHSS-SCBCTHHHHH
T ss_pred CcccCCcHHHeEECCCCcEeeccchhheeecccc---------------ccccccccCCCccChhhhcC-CCCCchhcee
Confidence 9999999999999999999999999998653221 12245689999999999998 5789999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
||||++|||++ ||....................+.+...++++++||.+||+.||.+|||+.++|+||||+.
T Consensus 201 SlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~ 275 (293)
T d1yhwa1 201 SLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275 (293)
T ss_dssp HHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGG
T ss_pred hHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCC
Confidence 99999999997 8877666665555554443334455667889999999999999999999999999999964
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-49 Score=447.03 Aligned_cols=259 Identities=29% Similarity=0.467 Sum_probs=218.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.++|++.+.||+|+||+||+|+++.+|+.||||+++.... .....+.+.+|+.+|++++|||||+++++|.
T Consensus 7 p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~-------- 78 (288)
T d1uu3a_ 7 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ-------- 78 (288)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEE--------
T ss_pred CCCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEE--------
Confidence 4789999999999999999999999999999999975321 1223467899999999999999999999873
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
+...+|+|||||+ |+|.+++...+.+++..++.++.||+.||+|||+
T Consensus 79 --------------------------------~~~~~~ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~ 126 (288)
T d1uu3a_ 79 --------------------------------DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 126 (288)
T ss_dssp --------------------------------CSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------ECCEEEEEEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhcc
Confidence 2467899999997 4999999999999999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++++||+|||+|+.+..... .....+.+||+.|||||++.+ ..|+.++|
T Consensus 127 ~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~-------------~~~~~~~~GT~~Y~APE~~~~-~~~~~~~D 192 (288)
T d1uu3a_ 127 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-------------QARANSFVGTAQYVSPELLTE-KSACKSSD 192 (288)
T ss_dssp TTEECSCCSGGGEEECTTSCEEECCCTTCEECC-----------------------CCCCGGGCCHHHHHT-CCCCHHHH
T ss_pred ccEEcCcCCccccccCCCceEEecccccceecccCCc-------------ccccccccCCccccCceeecc-CCCCcccc
Confidence 9999999999999999999999999999987542210 112345689999999999998 57999999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHH------HHhccC
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE------LLQDAL 688 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~e------iL~~~~ 688 (1196)
||||||+||||++ ||......+....+......+|. ..++++++||++||+.||.+|||++| +++|||
T Consensus 193 iwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpf 269 (288)
T d1uu3a_ 193 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE---KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 269 (288)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCT---TCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGG
T ss_pred eehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCCCCc---cCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCc
Confidence 9999999999996 89877776666665554444443 46789999999999999999999987 588999
Q ss_pred CCCchHH
Q 000993 689 PPQMEYE 695 (1196)
Q Consensus 689 ~~~~~~~ 695 (1196)
|....++
T Consensus 270 f~~i~w~ 276 (288)
T d1uu3a_ 270 FESVTWE 276 (288)
T ss_dssp GTTCCCT
T ss_pred cCCCCHH
Confidence 9887665
|
| >d1z7ma1 d.104.1.1 (A:6-323) ATP phosphoribosyltransferase regulatory subunit HisZ {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: ATP phosphoribosyltransferase regulatory subunit HisZ species: Lactococcus lactis [TaxId: 1358]
Probab=100.00 E-value=1.5e-48 Score=445.45 Aligned_cols=300 Identities=15% Similarity=0.241 Sum_probs=241.0
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccceee----c---CCCc-ccccceEEEeecCCceEeecCCCcH
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYL----L---GDCP-QFKRNTVKLLTHGGDLLELSHELRL 811 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~----~---~~~~-~~~~~my~f~D~~G~~laLRPD~T~ 811 (1196)
.|+|++|+.|.++..++++++.++++|++|||++|.||+|.. . +.+. ...++||+|.|++|+.++||||+|+
T Consensus 3 lP~g~~d~~~~~~~~~~~i~~~l~~~f~~~Gy~~I~tP~~E~~d~~~~~~~~~~~~~~~~~~~~~d~~g~~l~LRpD~T~ 82 (318)
T d1z7ma1 3 LPEESAEMTLNQVKSLRQIEGRLRKLFSLKNYQEVMPPSFEYTQLYTALESNGKTFNQEKMFQFIKHEGQSITLRYDFTL 82 (318)
T ss_dssp CCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEHHHHHHHHCSSSCCCTTSCCEEECTTCCEEEECCCSHH
T ss_pred CCCchhhhCHHHHHHHHHHHHHHHHHHHHcCCEEEECCccchHHHhhccCCCcccccccceeEeecCCccEEEeeccccc
Confidence 589999999999999999999999999999999999999922 2 2233 3468999999999999999999999
Q ss_pred HHHHHHHhCC-CCceeEEEecCeeecCCCCCC-CcceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEeCcH
Q 000993 812 PFIRWAISNQ-KSSFKRYEISSVYRRAIGHSP-PNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHG 889 (1196)
Q Consensus 812 ~iaR~~a~~~-~~P~r~~Y~G~VfR~e~~~~~-~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~~ 889 (1196)
|+||+++++. ..|.|+||+|+|||+++++.+ .+||+|+|+|+||.++..+|+|||.+++++|+.+|+++ ++|+|||+
T Consensus 83 ~iaR~~~~~~~~~~~r~~Y~g~vfR~~~~~~~r~rE~~Q~g~EiiG~~~~~ad~Eii~l~~e~l~~lgi~~-~~i~i~~~ 161 (318)
T d1z7ma1 83 PLVRLYSQIKDSTSARYSYFGKIFRKEKRHKGRSTENYQIGIELFGESADKSELEILSLALQVIEQLGLNK-TVFEIGSA 161 (318)
T ss_dssp HHHHHHHTCCSCCCEEEEEEEECCCCCC-------CCEEEEEEEESSCHHHHHHHHHHHHHHHHHHHTCSS-EEEEEEEH
T ss_pred hHHHHHHHhcccCCcccccccceeEEccccccccchhhhhheeccccchhhHHHHHHHHHHHHHHHhhhcc-ccccchhh
Confidence 9999998754 469999999999999887765 45799999999999999999999999999999999986 99999999
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHHH
Q 000993 890 DLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRL 969 (1196)
Q Consensus 890 ~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l 969 (1196)
++++.+++..+.+.+ .+.+++++++. .++ .+++...++.......+..+. ..+......+.+
T Consensus 162 ~l~~~ll~~~~~~~e---~~~~~l~~k~~------------~~l-~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~ 223 (318)
T d1z7ma1 162 KFFQRLCQLADGSTE---LLTELLLKKDL------------SGL-NAFIEKNNFSKELRGLLKEIF--ITNELSRLENLV 223 (318)
T ss_dssp HHHHHHHHHTTTCHH---HHHHHHHTTCH------------HHH-HHHHTTSCCCHHHHHHHHHHT--TCCCHHHHHHHH
T ss_pred hHHHHHHHhhhhhhh---hhHHHHHhhhc------------cch-hhhhhhhhhHHHHHHHHhhcc--cchhhHHHHHHh
Confidence 999999998887754 35556666551 122 345555666666655555443 233333332222
Q ss_pred hccCCCChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchhhhhc
Q 000993 970 RGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRM 1047 (1196)
Q Consensus 970 ~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~f 1047 (1196)
.. ..++...+.+++| +++.+++...+.||++++|+++||||+||++|..+.+. +||+|||||+|++.|
T Consensus 224 ~~--~~~~~~~~~l~~l~~~~~~~~~~~~i~~d~~~~r~~~YYtG~vF~~~~~~~~~--------~i~~GGRYD~L~~~~ 293 (318)
T d1z7ma1 224 TN--TKDDVLISSFDQLKEFSEKLSMIKPIIIDLGMVPKMDYYTDLMFKAYSSAANQ--------PILSGGRYDQLLSNF 293 (318)
T ss_dssp HH--TTCHHHHHHHHHHHHHHHHHTTTSCCEECTTCCCSSTTCCSEEEEEEETTEEE--------EEEEEEECHHHHHTS
T ss_pred hh--hhHHHHHHhHHHHhhHHHHhhhccccccCccccCCCcCCCCeEEEEEECCCCC--------eEEECcchHHHHHhc
Confidence 22 2345677788888 78888888889999999999999999999999876443 799999999999888
Q ss_pred cccccccccCCCCCCCcceecccHHHHHhhcc
Q 000993 1048 WDREYVGYASRTNPPSGVGASLALETIIQHYP 1079 (1196)
Q Consensus 1048 g~~~~~~~~g~~~~~pAvGfaiglerl~~~L~ 1079 (1196)
|. ++||||||+++|||+.+|+
T Consensus 294 g~-----------~~~avGfsi~ld~i~~~l~ 314 (318)
T d1z7ma1 294 QE-----------EAFAIGFCCHMDTILKALE 314 (318)
T ss_dssp SS-----------CCCCEEEEEEHHHHHHHHH
T ss_pred CC-----------CCCEEEEEeeHHHHHHHHH
Confidence 54 3699999999999998875
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-48 Score=448.76 Aligned_cols=260 Identities=27% Similarity=0.386 Sum_probs=223.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
.+++|++++.||+|+||+||+|+++.+|+.||||+++.... ......++.+|+.+|+.++|||||+++++|.
T Consensus 3 ~l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~------- 75 (337)
T d1o6la_ 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ------- 75 (337)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEE-------
T ss_pred chHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeec-------
Confidence 36899999999999999999999999999999999975321 1223567899999999999999999999883
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
+..++|+|||||+ |+|.+++...+.+++..++.++.||+.||+|||
T Consensus 76 ---------------------------------~~~~~~iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH 122 (337)
T d1o6la_ 76 ---------------------------------THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122 (337)
T ss_dssp ---------------------------------CSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------cccccccceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhh
Confidence 3567899999997 599999999999999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.+|++||+|||+|+...... ......+||+.|||||++.+ ..|+.++
T Consensus 123 ~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~---------------~~~~~~~GT~~Y~aPE~~~~-~~y~~~~ 186 (337)
T d1o6la_ 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---------------ATMKTFCGTPEYLAPEVLED-NDYGRAV 186 (337)
T ss_dssp HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT---------------CCBCCCEECGGGCCGGGGSS-SCBCTTH
T ss_pred hcCccccccCHHHeEecCCCCEEEeecccccccccCC---------------cccccceeCHHHhhhhhccC-CCCChhh
Confidence 9999999999999999999999999999998643211 12345789999999999998 5689999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhccC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDAL 688 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~~~ 688 (1196)
|||||||++|||++ ||......+....+......+| ...++++++||++||++||.+||+ +.++++|||
T Consensus 187 DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p---~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~ 263 (337)
T d1o6la_ 187 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263 (337)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGG
T ss_pred cccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCC---ccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcc
Confidence 99999999999996 8887777666665555444444 356789999999999999999994 999999999
Q ss_pred CCCchHHHH
Q 000993 689 PPQMEYELL 697 (1196)
Q Consensus 689 ~~~~~~~~~ 697 (1196)
|.+..++.+
T Consensus 264 f~~i~~~~l 272 (337)
T d1o6la_ 264 FLSINWQDV 272 (337)
T ss_dssp GTTCCHHHH
T ss_pred cccCCHHHH
Confidence 999876543
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=8.8e-49 Score=444.96 Aligned_cols=253 Identities=25% Similarity=0.397 Sum_probs=203.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
+.|++.+.||+|+||+||+|+++.+|+.||||++...... .....+.+|+.+|+.++|||||+++++|.
T Consensus 9 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~---------- 77 (307)
T d1a06a_ 9 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE-GKEGSMENEIAVLHKIKHPNIVALDDIYE---------- 77 (307)
T ss_dssp GTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC-----------CHHHHHHHTCCCTTBCCEEEEEE----------
T ss_pred cceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhh-hHHHHHHHHHHHHHhCCCCCCCcEEEEEE----------
Confidence 5699999999999999999999999999999999754432 23456889999999999999999999873
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
+..++|||||||+ |+|.+++...+.+++.+++.++.||+.||+|||++|
T Consensus 78 ------------------------------~~~~~~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~ 127 (307)
T d1a06a_ 78 ------------------------------SGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG 127 (307)
T ss_dssp ------------------------------CSSEEEEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ------------------------------ECCEEEEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhce
Confidence 2457899999997 699999999889999999999999999999999999
Q ss_pred CcccCCCcCcEEec---CCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 540 IIHRDLTPNNIFFD---ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 540 IiHrDLKp~NILld---~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
|+||||||+|||+. .++.+||+|||+|+...... ...+.+||+.|||||++.+ ..|+.++
T Consensus 128 iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~----------------~~~~~~GT~~y~APE~~~~-~~~~~~~ 190 (307)
T d1a06a_ 128 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS----------------VLSTACGTPGYVAPEVLAQ-KPYSKAV 190 (307)
T ss_dssp CCCSCCCGGGEEESSSSTTCCEEECCC----------------------------------CTTSCHHHHTT-CCCCTHH
T ss_pred eeeEEecccceeecccCCCceEEEeccceeEEccCCC----------------eeeeeeeCccccCcHHHcC-CCCCcHH
Confidence 99999999999995 47899999999998653221 1234689999999999998 5799999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
|||||||+||||++ ||......+....+.......+ +.+...++++.+||++||+.||.+|||++|+++||||.+
T Consensus 191 DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~ 269 (307)
T d1a06a_ 191 DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG 269 (307)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTS
T ss_pred HhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCC
Confidence 99999999999996 8987777666666655444443 344567889999999999999999999999999999975
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-49 Score=449.90 Aligned_cols=255 Identities=26% Similarity=0.417 Sum_probs=209.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|+++++||+|+||+||+|+++.+|+.||+|+++... ......++.+|+.+|+.++|||||+++++|.+
T Consensus 5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-------- 75 (322)
T d1s9ja_ 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-------- 75 (322)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC-CTTHHHHHHHHGGGGGGCCCTTBCCEEEEEEC--------
T ss_pred ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE--------
Confidence 378999999999999999999999999999999997543 33456789999999999999999999999843
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh-
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG- 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs- 537 (1196)
...+|||||||+| +|.+++.+.+.+++..++.++.||+.||.|||+
T Consensus 76 --------------------------------~~~~~iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~ 123 (322)
T d1s9ja_ 76 --------------------------------DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123 (322)
T ss_dssp --------------------------------SSEEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCEEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 4568999999975 999999988999999999999999999999997
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+||||+.++++||+|||+|+.+.... .++.+||+.|||||++.+ ..|+.++|
T Consensus 124 ~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~-----------------~~~~~GT~~Y~APEvl~~-~~y~~~~D 185 (322)
T d1s9ja_ 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----------------ANSFVGTRSYMSPERLQG-THYSVQSD 185 (322)
T ss_dssp HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHT-----------------C---CCSSCCCCHHHHHC-SCCCTTHH
T ss_pred CCEEccccCHHHeeECCCCCEEEeeCCCccccCCCc-----------------cccccCCccccCchHHcC-CCCCcHHH
Confidence 599999999999999999999999999998764221 245689999999999998 57999999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHH--------------------------------------hh-hcCCCCCcc
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSD--------------------------------------LK-QKGELPPSW 655 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~--------------------------------------l~-~~~~~p~~~ 655 (1196)
|||+||++|||++ ||......+..... .. .....++..
T Consensus 186 iWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (322)
T d1s9ja_ 186 IWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKL 265 (322)
T ss_dssp HHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------------------CCCCHHHHHHHHHTSCCCCC
T ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCccC
Confidence 9999999999996 88643321110000 00 000111111
Q ss_pred --ccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 656 --VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 656 --~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
...++++.+||++||+.||.+|||++|+|+||||++..
T Consensus 266 ~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~~ 305 (322)
T d1s9ja_ 266 PSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD 305 (322)
T ss_dssp CBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcCC
Confidence 12467899999999999999999999999999987643
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1e-48 Score=444.66 Aligned_cols=250 Identities=24% Similarity=0.394 Sum_probs=211.6
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
.|+.++.||+|+||+||+|+++.+|+.||||+++..... ....+.+.+|+.+|+.++|||||+++++|.+
T Consensus 16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~--------- 86 (309)
T d1u5ra_ 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR--------- 86 (309)
T ss_dssp HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE---------
T ss_pred hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEE---------
Confidence 499999999999999999999999999999999865433 3344679999999999999999999999843
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
...+|+|||||.+ +|..++....++++.+++.++.||+.||+|||++|
T Consensus 87 -------------------------------~~~~~iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~ 135 (309)
T d1u5ra_ 87 -------------------------------EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN 135 (309)
T ss_dssp -------------------------------TTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -------------------------------CCEEEEEEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4578999999986 56666667788999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC--CCCCCcch
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PKIDEKAD 617 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~~s~ksD 617 (1196)
|+||||||+|||++.++++||+|||+|+.... ....+||+.|||||++.+. ..|+.++|
T Consensus 136 iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~-------------------~~~~~GT~~Y~APE~~~~~~~~~y~~~~D 196 (309)
T d1u5ra_ 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVD 196 (309)
T ss_dssp CBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-------------------BCCCCSCGGGCCHHHHTTTTSCCBCTHHH
T ss_pred EeccCCCcceEEECCCCCEEEeecccccccCC-------------------CCccccCccccCHHHHhccCCCCcCchhh
Confidence 99999999999999999999999999975321 2345899999999998752 35899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCC
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
||||||++|||++ ||......+........ ...+......++++++||.+||+.||.+|||++++|+|||+.+
T Consensus 197 iwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~ 272 (309)
T d1u5ra_ 197 VWSLGITCIELAERKPPLFNMNAMSALYHIAQN-ESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 272 (309)
T ss_dssp HHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS-CCCCCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred hhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC-CCCCCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcC
Confidence 9999999999996 88776666655554442 2222233456789999999999999999999999999999854
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.1e-48 Score=443.59 Aligned_cols=256 Identities=27% Similarity=0.447 Sum_probs=222.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+++|++++.||+|+||+||+|+++.+|+.||||+++.... .....+.+.+|+.+|+.++|||||+++++|.+
T Consensus 3 l~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~------- 75 (316)
T d1fota_ 3 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD------- 75 (316)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC-------
T ss_pred hhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEee-------
Confidence 5799999999999999999999999999999999974321 12235678999999999999999999998842
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+|||||. |+|..++.....+++..++.++.||+.||+|||+
T Consensus 76 ---------------------------------~~~~~ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~ 122 (316)
T d1fota_ 76 ---------------------------------AQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS 122 (316)
T ss_dssp ---------------------------------SSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHT
T ss_pred ---------------------------------CCeeeeEeeecCCccccccccccccccccHHHHHHHHHHHhhhhhcc
Confidence 467899999997 5899999998999999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+||||+.++++||+|||+|+..... .++.+||+.|||||++.+ ..|+.++|
T Consensus 123 ~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~------------------~~~~~Gt~~Y~APE~l~~-~~y~~~~D 183 (316)
T d1fota_ 123 KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV------------------TYTLCGTPDYIAPEVVST-KPYNKSID 183 (316)
T ss_dssp TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC------------------BCCCCSCTTTCCHHHHTT-CCBCTTHH
T ss_pred CcEEccccCchheeEcCCCCEEEecCccceEeccc------------------cccccCcccccCHHHHcC-CCCCchhh
Confidence 99999999999999999999999999999864311 235689999999999988 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccCC
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALP 689 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~~ 689 (1196)
||||||+||||++ ||......+....+......+|+ ..+++++++|++||..||.+|| |++++++||||
T Consensus 184 iwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f 260 (316)
T d1fota_ 184 WWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP---FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWF 260 (316)
T ss_dssp HHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGG
T ss_pred ccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCccc
Confidence 9999999999997 99887777766666655444443 4567999999999999999996 99999999999
Q ss_pred CCchHHHH
Q 000993 690 PQMEYELL 697 (1196)
Q Consensus 690 ~~~~~~~~ 697 (1196)
++..++.+
T Consensus 261 ~~i~~~~l 268 (316)
T d1fota_ 261 KEVVWEKL 268 (316)
T ss_dssp SSCCHHHH
T ss_pred ccCCHHHH
Confidence 99987643
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-48 Score=435.96 Aligned_cols=257 Identities=26% Similarity=0.398 Sum_probs=218.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC----chhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS----LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~----~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
+.|++.+.||+|+||+||+|+++.+|+.||||+++..... ....+.+.+|+.+|+.++|||||+++++|.
T Consensus 10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~------ 83 (293)
T d1jksa_ 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE------ 83 (293)
T ss_dssp GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE------
T ss_pred cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEE------
Confidence 5699999999999999999999999999999999754322 223578999999999999999999999883
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
+...+|||||||+ |+|.+++...+.+++..++.++.||+.||+||
T Consensus 84 ----------------------------------~~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yL 129 (293)
T d1jksa_ 84 ----------------------------------NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 129 (293)
T ss_dssp ----------------------------------CSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------ECCEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhh
Confidence 2467899999997 59999999888999999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCC----CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 536 HGQGIIHRDLTPNNIFFDARN----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
|++||+||||||+|||++.++ .+||+|||+|+...... ...+..||+.|||||++.+ ..
T Consensus 130 H~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~----------------~~~~~~~t~~y~APE~~~~-~~ 192 (293)
T d1jksa_ 130 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----------------EFKNIFGTPEFVAPEIVNY-EP 192 (293)
T ss_dssp HHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSC----------------BCSCCCCCGGGCCHHHHTT-CC
T ss_pred hhcceeecccccceEEEecCCCcccceEecchhhhhhcCCCc----------------cccccCCCCcccCHHHHcC-CC
Confidence 999999999999999998776 49999999998653221 1245689999999999988 57
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
|+.++|||||||+||||++ ||......+....+.......++ .+...++++++||++||+.||.+|||++++++||
T Consensus 193 ~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp 272 (293)
T d1jksa_ 193 LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 272 (293)
T ss_dssp BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHST
T ss_pred CCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 8999999999999999996 88877776666555554444443 3456788999999999999999999999999999
Q ss_pred CCCCchH
Q 000993 688 LPPQMEY 694 (1196)
Q Consensus 688 ~~~~~~~ 694 (1196)
||+...+
T Consensus 273 ~~~~~~~ 279 (293)
T d1jksa_ 273 WIKPKDT 279 (293)
T ss_dssp TTCC---
T ss_pred ccCCCCh
Confidence 9987543
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=8.2e-48 Score=444.55 Aligned_cols=259 Identities=23% Similarity=0.410 Sum_probs=220.5
Q ss_pred CCCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCc
Q 000993 375 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 375 ~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~ 454 (1196)
.....+++|++++.||+|+||+||+|+++.+|+.||||++.... ....+.+.+|+.+|+.++|||||+++++|.+
T Consensus 20 ~~~~il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~--~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~--- 94 (350)
T d1koaa2 20 KHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFED--- 94 (350)
T ss_dssp BCSCGGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEEE---
T ss_pred CCCCCccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccc--hhhHHHHHHHHHHHHhCCCCCCCcEEEEEEE---
Confidence 33456789999999999999999999999999999999986432 3345678999999999999999999998843
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHh-hcCCCCHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFE-SYDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~-~~~~l~e~~~~~i~~qIa~gL 532 (1196)
...+|||||||+ |+|.+++. ..+++++.+++.++.||+.||
T Consensus 95 -------------------------------------~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL 137 (350)
T d1koaa2 95 -------------------------------------DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGL 137 (350)
T ss_dssp -------------------------------------TTEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence 457899999997 59999885 456799999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecC--CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDA--RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~--~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 610 (1196)
+|||++||+||||||+|||++. ++.+||+|||+|+.+.... ...+.+||+.|||||++.+ .
T Consensus 138 ~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~----------------~~~~~~gT~~Y~aPEv~~~-~ 200 (350)
T d1koaa2 138 CHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ----------------SVKVTTGTAEFAAPEVAEG-K 200 (350)
T ss_dssp HHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTS----------------CEEEECSCTTTCCHHHHHT-C
T ss_pred HHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheeccccc----------------ccceecCcccccCHHHHcC-C
Confidence 9999999999999999999964 5789999999998653221 1234689999999999998 5
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.|+.++|||||||++|||++ ||......+....+.......+. .+...++++++||++||+.||.+|||++++|+|
T Consensus 201 ~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 280 (350)
T d1koaa2 201 PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 280 (350)
T ss_dssp CBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred CCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 68999999999999999996 88877766666666555554443 445678899999999999999999999999999
Q ss_pred cCCCCc
Q 000993 687 ALPPQM 692 (1196)
Q Consensus 687 ~~~~~~ 692 (1196)
|||...
T Consensus 281 p~~~~~ 286 (350)
T d1koaa2 281 PWLTPG 286 (350)
T ss_dssp TTTSCT
T ss_pred cccCCC
Confidence 999764
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=1.4e-47 Score=442.98 Aligned_cols=258 Identities=22% Similarity=0.363 Sum_probs=220.0
Q ss_pred CCcccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 376 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 376 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
.+...++|++++.||+|+||+||+|+++.+|+.||||+++... ......+.+|+.+|+.++|||||+++++|.+
T Consensus 24 ~~~~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~---- 97 (352)
T d1koba_ 24 QGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFED---- 97 (352)
T ss_dssp CSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC----
T ss_pred CCCcccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcc--hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEE----
Confidence 3445688999999999999999999999999999999997533 2345678899999999999999999998832
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLA 533 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~ 533 (1196)
...+|||||||+ |+|.+.+... .++++.+++.++.||+.||+
T Consensus 98 ------------------------------------~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ 141 (352)
T d1koba_ 98 ------------------------------------KYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLK 141 (352)
T ss_dssp ------------------------------------SSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 467899999997 5998887654 46999999999999999999
Q ss_pred HHHhCCCcccCCCcCcEEec--CCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCC
Q 000993 534 HIHGQGIIHRDLTPNNIFFD--ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 611 (1196)
Q Consensus 534 yLHs~gIiHrDLKp~NILld--~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 611 (1196)
|||++||+||||||+||||+ .++.+||+|||+|+.+.... ......||+.|||||++.+ ..
T Consensus 142 ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~~ 204 (352)
T d1koba_ 142 HMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE----------------IVKVTTATAEFAAPEIVDR-EP 204 (352)
T ss_dssp HHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS----------------CEEEECSSGGGCCHHHHTT-CC
T ss_pred HHHHCCeeecccccccccccccCCCeEEEeecccceecCCCC----------------ceeeccCcccccCHHHHcC-CC
Confidence 99999999999999999998 56899999999998753221 1234579999999999988 56
Q ss_pred CCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 612 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 612 ~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
|+.++|||||||+||||++ ||......+....+.......+. .+...++++.+||++||+.||.+|||+.++|+||
T Consensus 205 ~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp 284 (352)
T d1koba_ 205 VGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHP 284 (352)
T ss_dssp BCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTST
T ss_pred CCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCH
Confidence 9999999999999999997 89877777666666555555443 4456788999999999999999999999999999
Q ss_pred CCCCc
Q 000993 688 LPPQM 692 (1196)
Q Consensus 688 ~~~~~ 692 (1196)
||++.
T Consensus 285 ~~~~~ 289 (352)
T d1koba_ 285 WLKGD 289 (352)
T ss_dssp TTSSC
T ss_pred hhCCC
Confidence 99764
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=3.5e-47 Score=425.52 Aligned_cols=258 Identities=24% Similarity=0.422 Sum_probs=220.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc-------hhHHHHHHHHHHHHhcC-CCCeeeeeeeee
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-------PVNDRILREVATLSRLQ-HQHVVRYYQAWF 450 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~-------~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~ 450 (1196)
|.++|++.+.||+|+||+||+|+++.+|+.||||+++...... ...+.+.+|+.+|++++ |||||+++++|.
T Consensus 1 f~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 80 (277)
T d1phka_ 1 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 80 (277)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred CcccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecc
Confidence 3579999999999999999999999999999999998654321 12346889999999997 999999999883
Q ss_pred ecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHH
Q 000993 451 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIV 529 (1196)
Q Consensus 451 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa 529 (1196)
+..++|||||||+ |+|.+++...+++++.+++.++.||+
T Consensus 81 ----------------------------------------~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~ 120 (277)
T d1phka_ 81 ----------------------------------------TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 120 (277)
T ss_dssp ----------------------------------------CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred ----------------------------------------cCcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 2467899999996 59999999989999999999999999
Q ss_pred HHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccC-
Q 000993 530 EGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG- 608 (1196)
Q Consensus 530 ~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~- 608 (1196)
.||+|||++||+||||||+|||++.++.+||+|||+|+.+.... ..+..+||+.|+|||++.+
T Consensus 121 ~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~gt~~y~~PE~~~~~ 184 (277)
T d1phka_ 121 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE----------------KLREVCGTPSYLAPEIIECS 184 (277)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC----------------CBCCCCSCGGGCCHHHHHHH
T ss_pred HHHHHHHHcCCcccccccceEEEcCCCCeEEccchheeEccCCC----------------ceeeeeccCCCCCHHHhhcc
Confidence 99999999999999999999999999999999999998753221 1234689999999999863
Q ss_pred ----CCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCCH
Q 000993 609 ----WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSA 680 (1196)
Q Consensus 609 ----~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPta 680 (1196)
...++.++||||+||+||||++ ||...........+.......+ +.+...++++++||++||++||.+|||+
T Consensus 185 ~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~ 264 (277)
T d1phka_ 185 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTA 264 (277)
T ss_dssp HCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCH
T ss_pred ccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCH
Confidence 2457899999999999999996 8988777666655555444433 3556788999999999999999999999
Q ss_pred HHHHhccCCCCc
Q 000993 681 TELLQDALPPQM 692 (1196)
Q Consensus 681 ~eiL~~~~~~~~ 692 (1196)
+++|+|+||++.
T Consensus 265 ~eil~h~~~~~~ 276 (277)
T d1phka_ 265 EEALAHPFFQQY 276 (277)
T ss_dssp HHHTTSGGGCTT
T ss_pred HHHHcCHHHHHh
Confidence 999999999863
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.7e-47 Score=444.37 Aligned_cols=261 Identities=25% Similarity=0.332 Sum_probs=211.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC----CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK----SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~----~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
+++|++++.||+|+||+||+|+++.+|+.||||++..... .........+|+.+++.++|||||+++++|.+
T Consensus 3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~---- 78 (364)
T d1omwa3 3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT---- 78 (364)
T ss_dssp STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC----
T ss_pred HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEE----
Confidence 6899999999999999999999999999999999964321 11112223345777777899999999998732
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|+|||||+ |+|.+++.....+++..++.++.||+.||+|
T Consensus 79 ------------------------------------~~~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~y 122 (364)
T d1omwa3 79 ------------------------------------PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 122 (364)
T ss_dssp ------------------------------------SSEEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHH
Confidence 457899999997 6999999999999999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++.+||+|||+|+.+... .....+||+.|||||++.+...|+.
T Consensus 123 lH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~-----------------~~~~~~GT~~y~APE~~~~~~~~~~ 185 (364)
T d1omwa3 123 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-----------------KPHASVGTHGYMAPEVLQKGVAYDS 185 (364)
T ss_dssp HHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSS-----------------CCCSCCSCGGGCCHHHHSTTCCCCT
T ss_pred HHHCCccceeeccceeEEcCCCcEEEeeeceeeecCCC-----------------cccccccccccchhHHhhcCCCCCc
Confidence 99999999999999999999999999999999864321 1234589999999999976467999
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCC-----HHHHHhc
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQD 686 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPt-----a~eiL~~ 686 (1196)
++|||||||+||||++ ||...................+..+...++++++||.+||+.||.+||| ++++++|
T Consensus 186 ~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H 265 (364)
T d1omwa3 186 SADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 265 (364)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred ccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence 9999999999999997 8865432211111111112222333457889999999999999999999 8999999
Q ss_pred cCCCCchHHHH
Q 000993 687 ALPPQMEYELL 697 (1196)
Q Consensus 687 ~~~~~~~~~~~ 697 (1196)
|||+++.+..+
T Consensus 266 p~f~~i~~~~~ 276 (364)
T d1omwa3 266 PFFRSLDWQMV 276 (364)
T ss_dssp GGGTTCCHHHH
T ss_pred ccccCCCHHHH
Confidence 99999987644
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.4e-47 Score=442.76 Aligned_cols=256 Identities=27% Similarity=0.404 Sum_probs=220.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+++|++++.||+|+||+||+|+++.+|+.||||++.... ......+.+.+|+.+|+.++|||||+++++|.+
T Consensus 40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~------- 112 (350)
T d1rdqe_ 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD------- 112 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------
T ss_pred ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccc-------
Confidence 589999999999999999999999999999999997432 112335678999999999999999999998732
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+|||||. |+|.+++...+.+++.+++.++.||+.||.|||+
T Consensus 113 ---------------------------------~~~~~~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~ 159 (350)
T d1rdqe_ 113 ---------------------------------NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159 (350)
T ss_dssp ---------------------------------SSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------ccccccccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 457899999996 5899999988999999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+|||||||||+|||++.++++||+|||+|+.+... ....+||+.|||||++.+ ..|+.++|
T Consensus 160 ~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~------------------~~~~~Gt~~Y~APE~~~~-~~~~~~~D 220 (350)
T d1rdqe_ 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------------------TWTLCGTPEALAPEIILS-KGYNKAVD 220 (350)
T ss_dssp TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC------------------BCCCEECGGGCCHHHHTT-CCBCTHHH
T ss_pred CCEecCcCCHHHcccCCCCCEEeeeceeeeecccc------------------cccccCccccCCHHHHcC-CCCCcccc
Confidence 99999999999999999999999999999865311 234689999999999998 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----CHHHHHhccCC
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALP 689 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP-----ta~eiL~~~~~ 689 (1196)
||||||+||||++ ||...........+.......| ...++++.+||++||+.||.+|+ |++++++||||
T Consensus 221 iwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p---~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f 297 (350)
T d1rdqe_ 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP---SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297 (350)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC---TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGG
T ss_pred ccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCCC---ccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccc
Confidence 9999999999997 8987766666555555443333 35678999999999999999994 99999999999
Q ss_pred CCchHHHH
Q 000993 690 PQMEYELL 697 (1196)
Q Consensus 690 ~~~~~~~~ 697 (1196)
....+..+
T Consensus 298 ~~~~~~~~ 305 (350)
T d1rdqe_ 298 ATTDWIAI 305 (350)
T ss_dssp TTCCHHHH
T ss_pred cCCCHHHH
Confidence 99887654
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-46 Score=424.90 Aligned_cols=259 Identities=27% Similarity=0.460 Sum_probs=210.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|+++++||+|+||+||+|+++.+|+.||||+++..........++.+|+.+|++++|||||+++++|.+
T Consensus 1 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~-------- 72 (298)
T d1gz8a_ 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-------- 72 (298)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEE--------
T ss_pred CCCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEecccccc--------
Confidence 479999999999999999999999999999999997654433345689999999999999999999999843
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~--~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
...+|+|||||++++.+++.. ...+++..++.++.||+.||+|||+
T Consensus 73 --------------------------------~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~ 120 (298)
T d1gz8a_ 73 --------------------------------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120 (298)
T ss_dssp --------------------------------TTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------ccceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhc
Confidence 457899999999887776643 4569999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+|||||||||+|||++.++++||+|||+|+...... ......+||+.|+|||++.....++.++|
T Consensus 121 ~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~---------------~~~~~~~gt~~y~apE~~~~~~~~~~~~D 185 (298)
T d1gz8a_ 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---------------RTYTHEVVTLWYRAPEILLGCKYYSTAVD 185 (298)
T ss_dssp TTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCS---------------BCTTCCBCCCTTCCHHHHTTCSSCCTHHH
T ss_pred CCEEccccCchheeecccCcceeccCCcceeccCCc---------------ccceeecccceeeehhhhccccCCCcccc
Confidence 999999999999999999999999999998753221 12344589999999999888666789999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC--------------------------CccccCCHHHHHHHHH
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP--------------------------PSWVAKFSEQESLLRR 668 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p--------------------------~~~~~~~~~l~~LI~~ 668 (1196)
||||||++|+|++ ||...........+....+... ......++++.+||++
T Consensus 186 iwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~ 265 (298)
T d1gz8a_ 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQ 265 (298)
T ss_dssp HHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHH
T ss_pred ccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHH
Confidence 9999999999996 8876655554443322111100 0112345788999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCch
Q 000993 669 LMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||..||.+|||+.|+|+|+||++..
T Consensus 266 mL~~dP~~R~t~~ell~H~ff~~~~ 290 (298)
T d1gz8a_ 266 MLHYDPNKRISAKAALAHPFFQDVT 290 (298)
T ss_dssp HTCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred HccCChhHCcCHHHHhCCHhhccCC
Confidence 9999999999999999999998753
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-47 Score=432.60 Aligned_cols=259 Identities=28% Similarity=0.407 Sum_probs=218.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHH-hcCCCCeeeeeeeeeecCcccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLS-RLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~-~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
+++|++++.||+|+||+||+|+++.+|+.||||+++.... .......+.+|..++. .++|||||+++++|.+
T Consensus 1 iddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~------ 74 (320)
T d1xjda_ 1 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT------ 74 (320)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC------
T ss_pred CCCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEcc------
Confidence 4789999999999999999999999999999999974321 1123455667777665 6899999999998843
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|||||||+ |+|.+++.....+++.+++.++.||+.||+|||
T Consensus 75 ----------------------------------~~~~yivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH 120 (320)
T d1xjda_ 75 ----------------------------------KENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH 120 (320)
T ss_dssp ----------------------------------SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCceeEEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 457899999997 599999999999999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++++||+|||+|+...... ...+..+||+.|+|||++.+ ..|+.++
T Consensus 121 ~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~ 184 (320)
T d1xjda_ 121 SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD---------------AKTNTFCGTPDYIAPEILLG-QKYNHSV 184 (320)
T ss_dssp HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT---------------CCBCCCCSCGGGCCHHHHTT-CCBCTHH
T ss_pred hCCeeeccCcccceeecCCCceeccccchhhhccccc---------------ccccccCCCCCcCCHHHHcC-CCCCchh
Confidence 9999999999999999999999999999998643211 12345689999999999998 5799999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHH-HHHhccCCCCc
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT-ELLQDALPPQM 692 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~-eiL~~~~~~~~ 692 (1196)
|||||||++|||++ ||.+....+....+......+| ...++++.+||++||+.||.+|||+. ++++||||.+.
T Consensus 185 DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p---~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~~ 261 (320)
T d1xjda_ 185 DWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP---RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 261 (320)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred hhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC---ccCCHHHHHHHHHhcccCCCCCcCHHHHHHhCchhccC
Confidence 99999999999996 8987777666655554443333 34678999999999999999999995 89999999998
Q ss_pred hHHHH
Q 000993 693 EYELL 697 (1196)
Q Consensus 693 ~~~~~ 697 (1196)
.++.+
T Consensus 262 ~~~~l 266 (320)
T d1xjda_ 262 NWEEL 266 (320)
T ss_dssp CHHHH
T ss_pred CHHHH
Confidence 76533
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-46 Score=425.20 Aligned_cols=254 Identities=26% Similarity=0.361 Sum_probs=201.3
Q ss_pred eEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc---hhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 384 EELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL---PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 384 ~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~---~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
+.+++||+|+||+||+|+++.+|+.||||+++...... .....+.+|+.+|+.++|||||+++++|..
T Consensus 1 E~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~--------- 71 (299)
T d1ua2a_ 1 EKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH--------- 71 (299)
T ss_dssp CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC---------
T ss_pred CcceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeecc---------
Confidence 35789999999999999999999999999997543321 123468899999999999999999998832
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHH-HHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQ-VFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~-~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
..++|||||||.+++.. +......+++..++.++.||+.||+|||++|
T Consensus 72 -------------------------------~~~~~ivmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ 120 (299)
T d1ua2a_ 72 -------------------------------KSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW 120 (299)
T ss_dssp -------------------------------TTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred -------------------------------CCceeehhhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccc
Confidence 34579999999875544 4445667999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+|||++.++.+||+|||+|+...... ......+||+.|||||++.+...|+.++|||
T Consensus 121 iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diw 185 (299)
T d1ua2a_ 121 ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN---------------RAYTHQVVTRWYRAPELLFGARMYGVGVDMW 185 (299)
T ss_dssp CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC---------------CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHH
T ss_pred eecccCCcceEEecCCCccccccCccccccCCCc---------------ccccceecChhhccHHHHccCCCCChhhhhh
Confidence 9999999999999999999999999997643221 1123468999999999988756789999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC--------------------CCC-----ccccCCHHHHHHHHHccc
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGE--------------------LPP-----SWVAKFSEQESLLRRLMS 671 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~--------------------~p~-----~~~~~~~~l~~LI~~cL~ 671 (1196)
||||++|||++ ||....+.+....+....+. .+. .+...++++.+||++||+
T Consensus 186 SlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~ 265 (299)
T d1ua2a_ 186 AVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFL 265 (299)
T ss_dssp HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHC
T ss_pred hcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHcc
Confidence 99999999997 77666555444333221110 000 112456789999999999
Q ss_pred CCCCCCCCHHHHHhccCCCCc
Q 000993 672 PSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 672 ~dP~~RPta~eiL~~~~~~~~ 692 (1196)
.||++|||++|+|+||||++.
T Consensus 266 ~dP~~R~sa~e~L~Hp~f~~~ 286 (299)
T d1ua2a_ 266 FNPCARITATQALKMKYFSNR 286 (299)
T ss_dssp SSTTTSCCHHHHHTSGGGTSS
T ss_pred CChhhCcCHHHHhCCHhhCCC
Confidence 999999999999999999864
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-46 Score=429.83 Aligned_cols=254 Identities=23% Similarity=0.354 Sum_probs=217.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
..++|++.+.||+|+||+||+|+++.+|+.||||+++... .....+.+|+.+|+.++|||||+++++|.+
T Consensus 3 ~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~---~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~------- 72 (321)
T d1tkia_ 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG---TDQVLVKKEISILNIARHRNILHLHESFES------- 72 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT---HHHHHHHHHHHHHHHSCCTTBCCEEEEEEE-------
T ss_pred CccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc---ccHHHHHHHHHHHHhCCCCCCCeEEEEEEE-------
Confidence 3578999999999999999999999999999999997532 334568899999999999999999998843
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
..++|||||||+ |+|.+++...+ .+++.+++.++.||+.||+|||
T Consensus 73 ---------------------------------~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH 119 (321)
T d1tkia_ 73 ---------------------------------MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119 (321)
T ss_dssp ---------------------------------TTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 457899999997 59999998665 7999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCC--CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 537 GQGIIHRDLTPNNIFFDAR--NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~--~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
++||+||||||+|||++.+ ..+||+|||+++...... .....+||+.|+|||.+.+ ..|+.
T Consensus 120 ~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~----------------~~~~~~~t~~y~ape~~~~-~~~~~ 182 (321)
T d1tkia_ 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD----------------NFRLLFTAPEYYAPEVHQH-DVVST 182 (321)
T ss_dssp HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC----------------EEEEEESCGGGSCHHHHTT-CEECH
T ss_pred HcCCCcccccccceeecCCCceEEEEcccchhhccccCC----------------cccccccccccccchhccC-CCCCc
Confidence 9999999999999999854 479999999998643211 1234579999999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCC
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 690 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~ 690 (1196)
++|||||||++|+|++ ||......+....+......++. .+...++++++||++||..||.+|||++++++||||.
T Consensus 183 ~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~ 262 (321)
T d1tkia_ 183 ATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLK 262 (321)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred hhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhc
Confidence 9999999999999996 89887777766666655544443 3456788999999999999999999999999999986
Q ss_pred Cc
Q 000993 691 QM 692 (1196)
Q Consensus 691 ~~ 692 (1196)
+.
T Consensus 263 ~~ 264 (321)
T d1tkia_ 263 QK 264 (321)
T ss_dssp SC
T ss_pred cC
Confidence 53
|
| >d1h4vb2 d.104.1.1 (B:2-325) Histidyl-tRNA synthetase (HisRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Histidyl-tRNA synthetase (HisRS) species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=9.1e-47 Score=431.78 Aligned_cols=298 Identities=14% Similarity=0.149 Sum_probs=214.3
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-Cc---ccccceEEEeecCCceEeecCCCc
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CP---QFKRNTVKLLTHGGDLLELSHELR 810 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~---~~~~~my~f~D~~G~~laLRPD~T 810 (1196)
+..+|++|++|.++.+++++++.++++|++|||++|+||+| ++..+ |. ...+.||+|.|.+|+.++||||+|
T Consensus 3 ~~~kG~rD~~p~~~~~~~~i~~~l~~~f~~~Gy~~I~tP~lE~~d~l~~~~g~~~~~~~~~~~~~~d~~g~~l~LRpD~T 82 (324)
T d1h4vb2 3 RAVRGTKDLFGKELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAATDIVRKEMFTFQDRGGRSLTLRPEGT 82 (324)
T ss_dssp CCCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEGGGGCCCSCC------CCSCEEECTTSCEEEECCCSH
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHHHHHHHHcCCeEeeCCccccHHHhhcccCCchhHHHHHHhhhhccCCcccccccccc
Confidence 56789999999999999999999999999999999999999 33333 33 357899999999999999999999
Q ss_pred HHHHHHHHhCC----CCceeEEEecCeeecCCCCCCC-cceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEE
Q 000993 811 LPFIRWAISNQ----KSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIH 885 (1196)
Q Consensus 811 ~~iaR~~a~~~----~~P~r~~Y~G~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~ 885 (1196)
+|+||+++.++ ..|+|+||+|+|||+++++.++ +||+|+|+|+||.++..+|+|+|.+++++|+.+|+.+ +.+.
T Consensus 83 ~~iar~~~~~~~~~~~~p~r~~Y~g~VfR~~~~~~gr~re~~Q~g~EiiG~~~~~ad~Eii~l~~~~l~~l~~~~-~~~~ 161 (324)
T d1h4vb2 83 AAMVRAYLEHGMKVWPQPVRLWMAGPMFRAERPQKGRYRQFHQVNYEALGSENPILDAEAVVLLYECLKELGLRR-LKVK 161 (324)
T ss_dssp HHHHHHHHHTTGGGSSSSEEEEEEEEEECCCCC----CCEEEEEEEEEESCCCHHHHHHHHHHHHHHHHHTTCCS-CEEE
T ss_pred cHHHHHHHHhhhhhhchhhhheeeCcccccCcccCCCcceeccccccccCCCChHHHHHHHHHHHHHHHHhcccC-ccee
Confidence 99999887643 4699999999999998887655 5699999999999999999999999999999999996 9999
Q ss_pred eCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHhcCChh
Q 000993 886 LNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLA--EAVVNRLQTVGLRFCGAAD 963 (1196)
Q Consensus 886 Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~--~~~~~~l~~l~~~~~g~~~ 963 (1196)
|+|.+++..+....++..+.. ..... ... .+....+ .+..+. ....+....++......
T Consensus 162 i~~~~~~~~~~~~~~~~~~~~-------~~~~~--------~~~-~~~~~~l-~~~~~~~~~~~~~~~~~ll~~~~~~-- 222 (324)
T d1h4vb2 162 LSSVGDPEDRARYNAYLREVL-------SPHRE--------ALS-EDSKERL-EENPMRILDSKSERDQALLKELGVR-- 222 (324)
T ss_dssp EEECCCHHHHHHHHHHHHHHH-------GGGGG--------GSC-HHHHHHH-HHCGGGGGGCCCHHHHHHHHHHCCC--
T ss_pred eeccCchhHHHHHHHHHHHHH-------HHHHH--------hhh-HHHHHHH-HhhhhhhhhhhhHHHHHHHHhhcCc--
Confidence 999887776665443322211 11110 000 0000111 111100 00011112222111111
Q ss_pred hHHHHHhccCCCChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccc
Q 000993 964 QALPRLRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD 1041 (1196)
Q Consensus 964 ~~l~~l~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD 1041 (1196)
.+++ ..+....+.++++ .++.+++ .+.||++++||++||||+||++|+.+.+. ..+||+|||||
T Consensus 223 ~~~~------~l~~~~~~~~~~~~~~~~~l~~--~i~iD~~~~rg~~YYtG~vFe~~~~~~g~------~~~i~~GGRYD 288 (324)
T d1h4vb2 223 PMLD------FLGEEARAHLKEVERHLERLSV--PYELEPALVRGLDYYVRTAFEVHHEEIGA------QSALGGGGRYD 288 (324)
T ss_dssp CGGG------GCCHHHHHHHHHHHHHHHHTTC--CEEECTTCCCCSTTCEEEEEEEEC------------CEEEEEEECT
T ss_pred hHHH------HHhHHHHHHHHHHHHHHhhcce--EEEEccccccCCccccCeEEEEEECCCCc------cCeeecCCccH
Confidence 0000 1245566667776 5666666 69999999999999999999999986432 24799999999
Q ss_pred hhhhhccccccccccCCCCCCCcceecccHHHHHhhccC
Q 000993 1042 YLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV 1080 (1196)
Q Consensus 1042 ~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~ 1080 (1196)
+|+++||++ ++||||||+++|||+.+|.+
T Consensus 289 ~L~~~f~~~----------~~pAvGfsi~ld~l~~~l~~ 317 (324)
T d1h4vb2 289 GLSELLGGP----------RVPGVGFAFGVERVALALEA 317 (324)
T ss_dssp THHHHTTCC----------CCCEEEEEEEHHHHHHHHHH
T ss_pred HHHHhcCCC----------CCCeEEEEeeHHHHHHHHHh
Confidence 999999654 46999999999999999873
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.9e-46 Score=421.82 Aligned_cols=247 Identities=22% Similarity=0.290 Sum_probs=205.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.++||+|+||+||+|+++.+|+.||||+++.... ..+++.+|+.+|+.++|||||+++++|.+
T Consensus 16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~---~~~~~~~E~~il~~l~HpnIv~~~~~~~~-------- 84 (287)
T d1opja_ 16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTR-------- 84 (287)
T ss_dssp GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccc---hHHHHHHHHHHHHhCCCCCEecCCccEee--------
Confidence 3689999999999999999999999999999999864332 35679999999999999999999999843
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|||||||+ |+|.+++... ..+++..++.++.||+.||+|||
T Consensus 85 --------------------------------~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH 132 (287)
T d1opja_ 85 --------------------------------EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 132 (287)
T ss_dssp --------------------------------SSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHH
Confidence 345699999997 6999998654 56899999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+|||++.++++||+|||+|+...... ........||+.|||||++.+ ..|+.++
T Consensus 133 ~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~--------------~~~~~~~~g~~~y~aPE~~~~-~~~~~k~ 197 (287)
T d1opja_ 133 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--------------YTAHAGAKFPIKWTAPESLAY-NKFSIKS 197 (287)
T ss_dssp HTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSS--------------SEEETTEEECGGGCCHHHHHH-CCCSHHH
T ss_pred HCCcccCccccCeEEECCCCcEEEccccceeecCCCC--------------ceeeccccccccccChHHHcC-CCCCchh
Confidence 9999999999999999999999999999998653221 111234568999999999988 5799999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
|||||||++|||++ ||............+. ....++.+...++++.+||.+||+.||.+|||+.++++
T Consensus 198 DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~ 268 (287)
T d1opja_ 198 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 268 (287)
T ss_dssp HHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHh-cCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 99999999999996 5554444444444433 33344445567789999999999999999999999986
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-46 Score=419.20 Aligned_cols=249 Identities=24% Similarity=0.353 Sum_probs=201.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||+|+||+||+|+++ ..||||+++....+....+.|.+|+.+|++++|||||++++++.
T Consensus 8 ~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~---------- 74 (276)
T d1uwha_ 8 GQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST---------- 74 (276)
T ss_dssp TCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC----------
T ss_pred ccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe----------
Confidence 67899999999999999999764 36999999876666666788999999999999999999998762
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|||||||+ |+|.+++... ..+++..+..++.||++||+|||++
T Consensus 75 -------------------------------~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~ 123 (276)
T d1uwha_ 75 -------------------------------APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123 (276)
T ss_dssp -------------------------------SSSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -------------------------------ccEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 124689999997 6999999754 5699999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC--CCCCCcc
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PKIDEKA 616 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~~s~ks 616 (1196)
+||||||||+|||++.++++||+|||+|+....... ....++..||+.|||||++.+. ..|+.++
T Consensus 124 ~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~-------------~~~~~~~~gt~~y~APE~l~~~~~~~~~~~s 190 (276)
T d1uwha_ 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-------------SHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190 (276)
T ss_dssp TCCCSCCCGGGEEEETTSSEEECCCCCSCC-------------------------CCCCGGGCCHHHHTTCSSCCCCHHH
T ss_pred CEeccccCHHHEEEcCCCCEEEccccceeeccccCC-------------cccccccccCcccCCHHHHhcccCCCCCchh
Confidence 999999999999999999999999999986532210 1123456899999999998753 3489999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC---CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP---PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p---~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||||||+||||+| ||............+......| ......++++.+||.+||+.||.+|||+.+|+++
T Consensus 191 DiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~ 266 (276)
T d1uwha_ 191 DVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266 (276)
T ss_dssp HHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 99999999999997 8876655544444444332222 2234567899999999999999999999999976
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-46 Score=412.74 Aligned_cols=245 Identities=22% Similarity=0.394 Sum_probs=192.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++++.||+|+||+||+|+++ +++.||||+++.... ..+++.+|+.+++.++|||||+++++|.+
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~---~~~~~~~E~~~l~~l~HpnIv~~~g~~~~--------- 71 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLE--------- 71 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS---------
T ss_pred HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcC---cHHHHHHHHHHHHhcCCCCcccccceecc---------
Confidence 58999999999999999999987 678899999874332 34679999999999999999999999843
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+|||||+ |+|.+++... ..+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~ 120 (263)
T d1sm2a_ 72 -------------------------------QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 120 (263)
T ss_dssp -------------------------------SSSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -------------------------------CCceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhcc
Confidence 234689999996 6999988654 5689999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
+|+||||||+|||++.++++||+|||+|+....... .......||+.|||||++.+ ..|+.++||
T Consensus 121 ~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~--------------~~~~~~~gt~~y~aPE~l~~-~~~~~k~DV 185 (263)
T d1sm2a_ 121 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY--------------TSSTGTKFPVKWASPEVFSF-SRYSSKSDV 185 (263)
T ss_dssp TCCCTTCSGGGEEECGGGCEEECSCC--------------------------------CTTSCCHHHHTT-CCCCHHHHH
T ss_pred ceeecccchhheeecCCCCeEecccchheeccCCCc--------------eeecceecCcccCChHHhcC-CCCCchhhh
Confidence 999999999999999999999999999986543211 11234579999999999998 579999999
Q ss_pred HHHHHHHHHhhc---C-CchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 619 YSLGIVFFELWH---P-FSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 619 wSlGviLyELlt---P-f~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||||+||||+| | |......+.. ..+.. +..++.+...++++.+||.+||+.||.+|||+++|+++
T Consensus 186 wS~Gvil~el~t~~~~~~~~~~~~~~~-~~i~~-~~~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 255 (263)
T d1sm2a_ 186 WSFGVLMWEVFSEGKIPYENRSNSEVV-EDIST-GFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ 255 (263)
T ss_dssp HHHHHHHHHHHTTSCCTTCSCCHHHHH-HHHHH-TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cchHHHHHHHHHCCCCCCCCCCHHHHH-HHHHh-cCCCCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 999999999996 4 4433333333 33332 23333344567899999999999999999999999986
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-46 Score=415.65 Aligned_cols=244 Identities=27% Similarity=0.354 Sum_probs=200.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||+|+||+||+|+++ +++.||||+++.... ..+.+.+|+.+|++++|||||++++++.+
T Consensus 13 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~---~~~~~~~E~~~l~~l~HpnIv~~~g~~~~--------- 79 (272)
T d1qpca_ 13 ETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLVRLYAVVTQ--------- 79 (272)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS---------
T ss_pred HHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcC---CHHHHHHHHHHHHhCCCCCEeEEEeeecc---------
Confidence 68999999999999999999987 678999999974332 34679999999999999999999997622
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
..+|+|||||+ |+|.+++... .++++.+++.++.||+.||+|||+
T Consensus 80 --------------------------------~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~ 127 (272)
T d1qpca_ 80 --------------------------------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127 (272)
T ss_dssp --------------------------------SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 23589999997 6898877543 369999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
++|+||||||+||||+.++.+||+|||+|+.+.... ........||+.|||||++.+ ..|+.++|
T Consensus 128 ~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~--------------~~~~~~~~gt~~y~APE~~~~-~~~~~~sD 192 (272)
T d1qpca_ 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE--------------YTAREGAKFPIKWTAPEAINY-GTFTIKSD 192 (272)
T ss_dssp TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC--------------EECCTTCCCCTTTSCHHHHHH-CEECHHHH
T ss_pred CCcccCccchhheeeecccceeeccccceEEccCCc--------------cccccccCCcccccChHHHhC-CCCCchhh
Confidence 999999999999999999999999999998653221 112345579999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
||||||+||||+| |+............+. .+..++.+...++++.+||++||+.||++|||+++|++
T Consensus 193 vwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~-~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~ 262 (272)
T d1qpca_ 193 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 262 (272)
T ss_dssp HHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHH-hcCCCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 9999999999997 4444333333333333 33334444567789999999999999999999999987
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.4e-45 Score=414.25 Aligned_cols=256 Identities=25% Similarity=0.447 Sum_probs=207.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|+++++||+|+||+||+|+++ +|+.||||+++..........++.+|+.+|+.++|||||+++++|..
T Consensus 1 ~~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-------- 71 (286)
T d1ob3a_ 1 MEKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT-------- 71 (286)
T ss_dssp CCSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC--------
T ss_pred CCCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeeccc--------
Confidence 478999999999999999999997 88999999997654444445789999999999999999999998843
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVF-ESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l-~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|++|||+.+++...+ ...+.+++..++.++.||+.||+|||++
T Consensus 72 --------------------------------~~~~~i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~ 119 (286)
T d1ob3a_ 72 --------------------------------KKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119 (286)
T ss_dssp --------------------------------SSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCceeEEEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccC
Confidence 3567999999987655554 5567899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+|....... .......||+.|+|||.+.+...++.++||
T Consensus 120 ~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~---------------~~~~~~~~~~~y~~pE~~~~~~~~~~~~Di 184 (286)
T d1ob3a_ 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV---------------RKYTHEIVTLWYRAPDVLMGSKKYSTTIDI 184 (286)
T ss_dssp TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------------------------CCCTTCCHHHHTTCCSCCTHHHH
T ss_pred cEEecCCCCceeeEcCCCCEEecccccceecccCc---------------cccceecccchhhhHHHHhCCCCCCcceee
Confidence 99999999999999999999999999998754321 112345789999999999876678999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC--------------------------CCccccCCHHHHHHHHHc
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL--------------------------PPSWVAKFSEQESLLRRL 669 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~--------------------------p~~~~~~~~~l~~LI~~c 669 (1196)
|||||++|||++ ||....+.+.........+.. +......++.+.+||++|
T Consensus 185 wslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~ 264 (286)
T d1ob3a_ 185 WSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKM 264 (286)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHH
T ss_pred hhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHH
Confidence 999999999996 887665544433322211110 011234567899999999
Q ss_pred ccCCCCCCCCHHHHHhccCCCC
Q 000993 670 MSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 670 L~~dP~~RPta~eiL~~~~~~~ 691 (1196)
|+.||++|||+.|+|+||||++
T Consensus 265 L~~dP~~R~s~~ell~Hp~f~~ 286 (286)
T d1ob3a_ 265 LKLDPNQRITAKQALEHAYFKE 286 (286)
T ss_dssp TCSSTTTSCCHHHHHTSGGGGC
T ss_pred ccCChhHCcCHHHHhcCcccCc
Confidence 9999999999999999999974
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.8e-45 Score=416.21 Aligned_cols=253 Identities=23% Similarity=0.327 Sum_probs=194.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
.++|++.+.||+|+||+||+|+++.+|+ .||||++... ......+.|.+|+.+|++++|||||+++++|.+
T Consensus 25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~----- 98 (299)
T d1jpaa_ 25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG-YTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTK----- 98 (299)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSS-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-----
T ss_pred hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcc-cCHHHHHHHHHHHHHHHhCCCCCCccEEEEEee-----
Confidence 3679999999999999999999987765 5888887533 344456789999999999999999999999843
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+|+|||||+ |+|.+++... +.+++.+++.++.||++||+|
T Consensus 99 -----------------------------------~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~y 143 (299)
T d1jpaa_ 99 -----------------------------------STPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKY 143 (299)
T ss_dssp -----------------------------------SSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHH
Confidence 345699999997 5899988764 569999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||+++|+||||||+||||+.++++||+|||+|+.+....... .........||+.|||||++.+ ..|+.
T Consensus 144 LH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~----------~~~~~~~~~~t~~y~aPE~~~~-~~~~~ 212 (299)
T d1jpaa_ 144 LADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP----------TYTSALGGKIPIRWTAPEAIQY-RKFTS 212 (299)
T ss_dssp HHHTTCCCSCCCGGGEEECTTCCEEECCC---------------------------------CGGGSCHHHHHS-CCCCH
T ss_pred HhhCCCccCccccceEEECCCCcEEECCcccceEccCCCCcc----------eeeecccccCCccccCHHHHhc-CCCCc
Confidence 999999999999999999999999999999998764322110 0111234568999999999987 57999
Q ss_pred cchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 615 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 615 ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++|||||||+||||+| ||......+...... ....++.+...++++.+||.+||+.||.+|||+.+|+++
T Consensus 213 ~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~ 286 (299)
T d1jpaa_ 213 ASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE--QDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286 (299)
T ss_dssp HHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred ccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHH--cCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 9999999999999986 787666655544332 233344455678899999999999999999999999864
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-45 Score=414.95 Aligned_cols=263 Identities=25% Similarity=0.381 Sum_probs=207.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccC-CcEEEEEEEecCCCCchhHHHHHHHHHHHHhc---CCCCeeeeeeeeeecCc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLD-GRHYAVKKIRLKDKSLPVNDRILREVATLSRL---QHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~-g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L---~HpnIV~l~~~~~e~~~ 454 (1196)
..++|+++++||+|+||+||+|++..+ ++.||||+++...........+.+|+.+|+.| +|||||+++++|....
T Consensus 5 ~~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~- 83 (305)
T d1blxa_ 5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR- 83 (305)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE-
T ss_pred CcCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccc-
Confidence 357999999999999999999999765 67899999976543333334566777777665 8999999999985321
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHh--hcCCCCHHHHHHHHHHHHHHH
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE--SYDHFDKELAWHLFRQIVEGL 532 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~--~~~~l~e~~~~~i~~qIa~gL 532 (1196)
.....++|++||||++++..+.. ....+++..++.++.||+.||
T Consensus 84 ----------------------------------~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL 129 (305)
T d1blxa_ 84 ----------------------------------TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 129 (305)
T ss_dssp ----------------------------------CSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHH
T ss_pred ----------------------------------cccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHH
Confidence 02346789999999986655443 345699999999999999999
Q ss_pred HHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCC
Q 000993 533 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 612 (1196)
Q Consensus 533 ~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 612 (1196)
+|||++||+||||||+|||++.++.+||+|||+++...... .....+||+.|||||++.+ ..|
T Consensus 130 ~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~gT~~Y~APE~~~~-~~y 192 (305)
T d1blxa_ 130 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM----------------ALTSVVVTLWYRAPEVLLQ-SSY 192 (305)
T ss_dssp HHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGG----------------GGCCCCCCCTTCCHHHHTT-CCC
T ss_pred HHHHhCCEEecCCCccEEEEcCCCCeeecchhhhhhhcccc----------------cCCCcccChhhcCcchhcC-CCC
Confidence 99999999999999999999999999999999987543221 2345689999999999988 579
Q ss_pred CCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCC------------------------CCccccCCHHHHHH
Q 000993 613 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL------------------------PPSWVAKFSEQESL 665 (1196)
Q Consensus 613 s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~------------------------p~~~~~~~~~l~~L 665 (1196)
+.++|||||||++|||++ ||......+....+....+.. +..+...++.+.+|
T Consensus 193 ~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dl 272 (305)
T d1blxa_ 193 ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDL 272 (305)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHH
T ss_pred ChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHH
Confidence 999999999999999996 887766555444332211110 01123456789999
Q ss_pred HHHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 666 LRRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 666 I~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
|++||+.||.+|||+.|+|+||||+.+.
T Consensus 273 i~~mL~~dP~~R~sa~e~L~Hpff~~i~ 300 (305)
T d1blxa_ 273 LLKCLTFNPAKRISAYSALSHPYFQDLE 300 (305)
T ss_dssp HHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred HHHHCcCChhHCcCHHHHhcChhhcCch
Confidence 9999999999999999999999998764
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-45 Score=413.47 Aligned_cols=243 Identities=22% Similarity=0.295 Sum_probs=197.1
Q ss_pred eeeccCCcEEEEEEEEcc--CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCcCC
Q 000993 387 QPLGHGGFGHVVLCKNKL--DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 464 (1196)
Q Consensus 387 ~~LG~G~fG~Vy~a~~~~--~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~~~ 464 (1196)
++||+|+||+||+|.++. +++.||||+++....+....+++.+|+.+|++++|||||+++++|..
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~------------- 79 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA------------- 79 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-------------
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-------------
Confidence 479999999999998753 45789999997655555566789999999999999999999998721
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 000993 465 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 543 (1196)
Q Consensus 465 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gIiHr 543 (1196)
...|||||||+ |+|.+++.....+++.+++.++.||+.||+|||+++|+||
T Consensus 80 ----------------------------~~~~lvmE~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHr 131 (277)
T d1xbba_ 80 ----------------------------ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 131 (277)
T ss_dssp ----------------------------SSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred ----------------------------CCEEEEEEcCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccC
Confidence 23589999997 5999999998999999999999999999999999999999
Q ss_pred CCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHHHHH
Q 000993 544 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 623 (1196)
Q Consensus 544 DLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGv 623 (1196)
||||+|||++.++.+||+|||+|+.+..... .........||+.|||||++.+ ..|+.++|||||||
T Consensus 132 DlKp~Nill~~~~~~kl~DFGla~~~~~~~~------------~~~~~~~~~gt~~y~APE~l~~-~~~~~~sDiwS~Gv 198 (277)
T d1xbba_ 132 DLAARNVLLVTQHYAKISDFGLSKALRADEN------------YYKAQTHGKWPVKWYAPECINY-YKFSSKSDVWSFGV 198 (277)
T ss_dssp CCSGGGEEEEETTEEEECCCTTCEECCTTCS------------EEEC----CCCGGGCCHHHHHH-CEEEHHHHHHHHHH
T ss_pred CCcchhhcccccCcccccchhhhhhcccccc------------ccccccccCCCceecCchhhcC-CCCCchhhhccchh
Confidence 9999999999999999999999986532211 0112234579999999999987 56899999999999
Q ss_pred HHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 624 VFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 624 iLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
++|||++ ||......+...... .+..++.+...++++.+||.+||+.||.+|||+.+|++
T Consensus 199 ~l~ellt~g~~Pf~~~~~~~~~~~i~--~~~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~ 262 (277)
T d1xbba_ 199 LMWEAFSYGQKPYRGMKGSEVTAMLE--KGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 262 (277)
T ss_dssp HHHHHHTTTCCSSTTCCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred hhhHHhhCCCCCCCCCCHHHHHHHHH--cCCCCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 9999985 887766555443332 33444445567789999999999999999999999854
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.7e-46 Score=414.39 Aligned_cols=248 Identities=26% Similarity=0.367 Sum_probs=205.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCc----hhHHHHHHHHHHHHhcC--CCCeeeeeeeeeecC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----PVNDRILREVATLSRLQ--HQHVVRYYQAWFETG 453 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~----~~~~~~~~Ev~iL~~L~--HpnIV~l~~~~~e~~ 453 (1196)
.++|++.+.||+|+||+||+|+++.+|+.||||+++...... ....++.+|+.+|+.++ |||||+++++|.
T Consensus 3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~--- 79 (273)
T d1xwsa_ 3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE--- 79 (273)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE---
T ss_pred CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEe---
Confidence 368999999999999999999999999999999997543221 11234678999999996 899999999873
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC--CHHHHHhhcCCCCHHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR--TLRQVFESYDHFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g--sL~~~l~~~~~l~e~~~~~i~~qIa~g 531 (1196)
+...+|+||||+.+ ++.+++.....+++.+++.++.||+.|
T Consensus 80 -------------------------------------~~~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~a 122 (273)
T d1xwsa_ 80 -------------------------------------RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 122 (273)
T ss_dssp -------------------------------------CSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHH
T ss_pred -------------------------------------eCCeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHH
Confidence 24578999999963 788888888899999999999999999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCC-CCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 610 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 610 (1196)
|+|||++||+||||||+|||++.+ +.+||+|||+|+..... ..++.+||+.|||||++.+..
T Consensus 123 l~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~-----------------~~~~~~GT~~y~aPE~~~~~~ 185 (273)
T d1xwsa_ 123 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----------------VYTDFDGTRVYSPPEWIRYHR 185 (273)
T ss_dssp HHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCSS-----------------CBCCCCSCGGGSCHHHHHHSC
T ss_pred HHHHHHCCCccccCcccceEEecCCCeEEECccccceecccc-----------------cccccccCCCcCCHHHHcCCC
Confidence 999999999999999999999855 78999999999754211 124568999999999998755
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhcc
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 687 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~ 687 (1196)
.++.++|||||||++|||++ ||..... .......++ ...++++++||++||+.||.+|||++++++||
T Consensus 186 ~~~~~~DiwSlGvilyell~g~~Pf~~~~~------i~~~~~~~~---~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp 256 (273)
T d1xwsa_ 186 YHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFR---QRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 256 (273)
T ss_dssp BCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHHCCCCCS---SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred CCCcccccccceeeehhHhhCCCCCCCchH------HhhcccCCC---CCCCHHHHHHHHHHccCCHhHCcCHHHHhcCH
Confidence 56788999999999999997 8865432 122222233 34678999999999999999999999999999
Q ss_pred CCCCch
Q 000993 688 LPPQME 693 (1196)
Q Consensus 688 ~~~~~~ 693 (1196)
||++..
T Consensus 257 ~~~~~~ 262 (273)
T d1xwsa_ 257 WMQDVL 262 (273)
T ss_dssp GGSSCC
T ss_pred hhCCCC
Confidence 998753
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-45 Score=421.78 Aligned_cols=261 Identities=25% Similarity=0.405 Sum_probs=208.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
-++|+++++||+|+||+||+|+++.+|+.||||+++....+....+.+.+|+.+|+.++|||||+++++|...+.
T Consensus 17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~----- 91 (346)
T d1cm8a_ 17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDET----- 91 (346)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSS-----
T ss_pred CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcc-----
Confidence 468999999999999999999999999999999998655555667789999999999999999999999854321
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
......+|+|||||+.+|..++. ..++++..++.++.||+.||+|||++|
T Consensus 92 -----------------------------~~~~~~~~lv~e~~~~~l~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~ 141 (346)
T d1cm8a_ 92 -----------------------------LDDFTDFYLVMPFMGTDLGKLMK-HEKLGEDRIQFLVYQMLKGLRYIHAAG 141 (346)
T ss_dssp -----------------------------TTTCCCCEEEEECCSEEHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -----------------------------ccccceEEEEEecccccHHHHHH-hccccHHHHHHHHHHHHHHHHHHHhCC
Confidence 01234679999999878877664 467999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+|||++.++.+||+|||+|+.... ..+..+||+.|+|||++.+...++.++|||
T Consensus 142 IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw 203 (346)
T d1cm8a_ 142 IIHRDLKPGNLAVNEDCELKILDFGLARQADS------------------EMTGYVVTRWYRAPEVILNWMRYTQTVDIW 203 (346)
T ss_dssp EECCCCCGGGEEECTTCCEEECCCTTCEECCS------------------SCCSSCSCGGGCCTHHHHTTTCCCTTHHHH
T ss_pred CcccccCcchhhcccccccccccccceeccCC------------------ccccccccccccCHHHHcCCCCCCccchhh
Confidence 99999999999999999999999999976421 124568999999999998766789999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC----------------------------CCCccccCCHHHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGE----------------------------LPPSWVAKFSEQESLLRR 668 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~----------------------------~p~~~~~~~~~l~~LI~~ 668 (1196)
|+||++|||++ ||................+. ........++.+.+||++
T Consensus 204 SlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~ 283 (346)
T d1cm8a_ 204 SVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEK 283 (346)
T ss_dssp HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHH
T ss_pred cchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHH
Confidence 99999999996 77655443332222111111 111223456789999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCch
Q 000993 669 LMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
||..||.+|||+.++|+||||++..
T Consensus 284 mL~~dP~~R~ta~eiL~Hp~f~~~~ 308 (346)
T d1cm8a_ 284 MLVLDAEQRVTAGEALAHPYFESLH 308 (346)
T ss_dssp HSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred HCcCChhHCcCHHHHhcChhhCcCC
Confidence 9999999999999999999998764
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=5.1e-45 Score=407.94 Aligned_cols=257 Identities=26% Similarity=0.414 Sum_probs=207.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.++|++.+.||+|+||+||+|+++.+|+.||||+++.... .......+.+|+.+|+.++|||||++++++....
T Consensus 6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~----- 80 (277)
T d1o6ya_ 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET----- 80 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEC-----
T ss_pred cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeecc-----
Confidence 4679999999999999999999999999999999976543 3445567999999999999999999999885431
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
.....+|+|||||+| +|.+++...+++++.+++.++.||+.||+|||+
T Consensus 81 -------------------------------~~~~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~ 129 (277)
T d1o6ya_ 81 -------------------------------PAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ 129 (277)
T ss_dssp -------------------------------SSSEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------CCCceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 123568999999974 899999998999999999999999999999999
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 617 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksD 617 (1196)
+||+||||||+|||++.++.++|+|||.++....... ........+||+.|||||++.+ ..|+.++|
T Consensus 130 ~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~------------~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~~~D 196 (277)
T d1o6ya_ 130 NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN------------SVTQTAAVIGTAQYLSPEQARG-DSVDARSD 196 (277)
T ss_dssp TTEECCCCSGGGEEEETTSCEEECCCTTCEECC----------------------------TTCCHHHHTT-CCCCHHHH
T ss_pred CCccCccccCcccccCccccceeehhhhhhhhccccc------------cccccccccCcccccCHHHHcC-CCCCccee
Confidence 9999999999999999999999999999875432210 1112345689999999999988 57999999
Q ss_pred hHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHcccCCCCCCC-CHHHHHh
Q 000993 618 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRP-SATELLQ 685 (1196)
Q Consensus 618 VwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~~l~~LI~~cL~~dP~~RP-ta~eiL~ 685 (1196)
||||||++|||+| ||......+.....+......+. .+...++++.+||++||++||.+|| |+++++.
T Consensus 197 iwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~ 269 (277)
T d1o6ya_ 197 VYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 269 (277)
T ss_dssp HHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred cccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHH
Confidence 9999999999997 89887777776666654443332 2345778999999999999999999 6666653
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-45 Score=421.52 Aligned_cols=256 Identities=27% Similarity=0.392 Sum_probs=206.0
Q ss_pred CCcccCCceEEe-eeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecC
Q 000993 376 SSRYLNDFEELQ-PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 453 (1196)
Q Consensus 376 ~~~~~~~y~~~~-~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~ 453 (1196)
....+++|+++. .||+|+||+||+|+++.+|+.||||+++. ...+.+|+.++.++ +|||||+++++|...
T Consensus 6 ~~~i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-------~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~- 77 (335)
T d2ozaa1 6 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENL- 77 (335)
T ss_dssp CSCGGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEE-
T ss_pred CCCcccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-------cHHHHHHHHHHHHhcCCCCCCeEEEEEeec-
Confidence 344578999986 59999999999999999999999999863 24577899987655 899999999987431
Q ss_pred ccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--CCCCHHHHHHHHHHHHH
Q 000993 454 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVE 530 (1196)
Q Consensus 454 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qIa~ 530 (1196)
.....++|||||||+ |+|.+++... ..+++.+++.++.||+.
T Consensus 78 -----------------------------------~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~ 122 (335)
T d2ozaa1 78 -----------------------------------YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 122 (335)
T ss_dssp -----------------------------------ETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHH
T ss_pred -----------------------------------ccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHH
Confidence 012467899999997 5999999764 46999999999999999
Q ss_pred HHHHHHhCCCcccCCCcCcEEecC---CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhcc
Q 000993 531 GLAHIHGQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 607 (1196)
Q Consensus 531 gL~yLHs~gIiHrDLKp~NILld~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 607 (1196)
||+|||++||+||||||+|||++. ++.+||+|||+|+...... .....+||+.|||||++.
T Consensus 123 al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~ 186 (335)
T d2ozaa1 123 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN----------------SLTTPCYTPYYVAPEVLG 186 (335)
T ss_dssp HHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCC----------------CCCCCSCCCSSCCCCCCC
T ss_pred HHHHHHHcCCccccccccccccccccccccccccccceeeeccCCC----------------ccccccCCcccCCcHHHc
Confidence 999999999999999999999986 4679999999998653221 124468999999999998
Q ss_pred CCCCCCCcchhHHHHHHHHHhhc---CCchhHHHHHHHH----HhhhcCCCC-CccccCCHHHHHHHHHcccCCCCCCCC
Q 000993 608 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLS----DLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPS 679 (1196)
Q Consensus 608 ~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~~~~~~----~l~~~~~~p-~~~~~~~~~l~~LI~~cL~~dP~~RPt 679 (1196)
+ ..|+.++|||||||+||+|+| ||........... +......+| +.+...++++.+||++||+.||.+|||
T Consensus 187 ~-~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s 265 (335)
T d2ozaa1 187 P-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMT 265 (335)
T ss_dssp G-GGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCC
T ss_pred C-CCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcC
Confidence 8 569999999999999999997 8866543222111 111122233 345567889999999999999999999
Q ss_pred HHHHHhccCCCC
Q 000993 680 ATELLQDALPPQ 691 (1196)
Q Consensus 680 a~eiL~~~~~~~ 691 (1196)
+.++++||||.+
T Consensus 266 ~~eil~hp~~~~ 277 (335)
T d2ozaa1 266 ITEFMNHPWIMQ 277 (335)
T ss_dssp HHHHHHSHHHHT
T ss_pred HHHHHcCHHhhC
Confidence 999999999754
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-45 Score=419.87 Aligned_cols=250 Identities=22% Similarity=0.281 Sum_probs=202.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc-----EEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGR-----HYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~-----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~ 454 (1196)
++|++.++||+|+||+||+|+++.+++ .||+|++.... .......+.+|+.+|+++ +|||||+++++|.+
T Consensus 37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~--- 112 (325)
T d1rjba_ 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTL--- 112 (325)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEecccc-CHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEee---
Confidence 689999999999999999999986554 69999886433 223446789999999998 89999999999843
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc--------------------
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------------------- 513 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------------------- 513 (1196)
...+|+|||||+ |+|.+++...
T Consensus 113 -------------------------------------~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 155 (325)
T d1rjba_ 113 -------------------------------------SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 155 (325)
T ss_dssp -------------------------------------SSSCEEEEECCTTCBHHHHHHTTTTCC----------------
T ss_pred -------------------------------------CCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccc
Confidence 345799999996 6999999654
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCcccc
Q 000993 514 ---DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 590 (1196)
Q Consensus 514 ---~~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~ 590 (1196)
..+++..++.++.||+.||+|||+++|+||||||+|||++.++++||+|||+|+....... ...
T Consensus 156 ~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~-------------~~~ 222 (325)
T d1rjba_ 156 EDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN-------------YVV 222 (325)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT-------------SEE
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccCCeEEEeeccccccccCCCc-------------eee
Confidence 2488999999999999999999999999999999999999999999999999986532210 111
Q ss_pred CcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHH
Q 000993 591 GTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLL 666 (1196)
Q Consensus 591 ~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI 666 (1196)
..+..||+.|||||++.+ ..|+.++|||||||+||||+| ||......+.....+. ....++.+...++++++||
T Consensus 223 ~~~~~gt~~y~aPE~l~~-~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~-~~~~~~~p~~~~~~l~~li 300 (325)
T d1rjba_ 223 RGNARLPVKWMAPESLFE-GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQ-NGFKMDQPFYATEEIYIIM 300 (325)
T ss_dssp ETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH-TTCCCCCCTTCCHHHHHHH
T ss_pred eccccCCCccCChHHHcC-CCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHh-cCCCCCCCCcCCHHHHHHH
Confidence 234578999999999987 579999999999999999985 7876554444444444 3333444456778999999
Q ss_pred HHcccCCCCCCCCHHHHHhc
Q 000993 667 RRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 667 ~~cL~~dP~~RPta~eiL~~ 686 (1196)
.+||+.||++|||+++|++|
T Consensus 301 ~~cl~~dP~~RPt~~ei~~~ 320 (325)
T d1rjba_ 301 QSCWAFDSRKRPSFPNLTSF 320 (325)
T ss_dssp HHHTCSSGGGSCCHHHHHHH
T ss_pred HHHcCCChhHCcCHHHHHHH
Confidence 99999999999999999986
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-44 Score=406.12 Aligned_cols=251 Identities=20% Similarity=0.282 Sum_probs=195.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCC----cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDG----RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
++|++.+.||+|+||+||+|.++.++ ..||||+++.. .......++.+|+.+|+.++|||||+++++|.+
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~----- 80 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG-YTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK----- 80 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-----
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcc-cChHHHHHHHHHHHHHHhcCCCCEeeeeEEEec-----
Confidence 57899999999999999999988654 47999998643 334455679999999999999999999999843
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhc-CCCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qIa~gL~y 534 (1196)
...+++|||||.+ ++.+++... ..+++.++..++.||+.||+|
T Consensus 81 -----------------------------------~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~ 125 (283)
T d1mqba_ 81 -----------------------------------YKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKY 125 (283)
T ss_dssp -----------------------------------SSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhh
Confidence 3457999999975 777776544 579999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||+++|+||||||+||||+.++++||+|||+|+.+..... .........||+.|||||++.+ ..|+.
T Consensus 126 lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~------------~~~~~~~~~gt~~Y~APE~l~~-~~~~~ 192 (283)
T d1mqba_ 126 LANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE------------ATYTTSGGKIPIRWTAPEAISY-RKFTS 192 (283)
T ss_dssp HHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------------------CCCGGGSCHHHHHS-CCCCH
T ss_pred ccccccccCccccceEEECCCCeEEEcccchhhcccCCCc------------cceEeccCCCCccccCHHHHcc-CCCCC
Confidence 9999999999999999999999999999999987543210 0112344578999999999988 67999
Q ss_pred cchhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 615 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 615 ksDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++|||||||+||||++ ||............+. .+..++.....++++.+||.+||+.||++|||+.+|++.
T Consensus 193 ~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~ 266 (283)
T d1mqba_ 193 ASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN-DGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSI 266 (283)
T ss_dssp HHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH-TTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred cccccccHHHHHHHHhCCCCccccCCHHHHHHHHh-ccCCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHH
Confidence 9999999999999986 5444433333344443 334444455677899999999999999999999999863
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-44 Score=401.28 Aligned_cols=245 Identities=20% Similarity=0.365 Sum_probs=206.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.++||+|+||+||+|+++ +++.||||+++..... .+++.+|+.+++.++|||||+++++|.+
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~Ev~~~~~l~HpnIv~~~g~~~~--------- 70 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVCTK--------- 70 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSSC---HHHHHHHHHHHHTCCCTTBCCEEEEECC---------
T ss_pred HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcCC---HHHHHHHHHHHHhcCCCceeeEEEEEee---------
Confidence 68999999999999999999996 7889999999854433 4679999999999999999999998832
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFE-SYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~-~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...+|+|||||+ |+|.+++. ....+++..+++++.||++||+|||++
T Consensus 71 -------------------------------~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~ 119 (258)
T d1k2pa_ 71 -------------------------------QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 119 (258)
T ss_dssp -------------------------------SSSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -------------------------------CCceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhc
Confidence 345799999997 68888865 456799999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+|+.+.... ........||+.|+|||++.+ ..|+.++||
T Consensus 120 ~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~--------------~~~~~~~~~t~~y~aPE~~~~-~~~~~ksDi 184 (258)
T d1k2pa_ 120 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--------------YTSSVGSKFPVRWSPPEVLMY-SKFSSKSDI 184 (258)
T ss_dssp TBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSS--------------CCCCCCSCCCGGGCCHHHHHH-CCCCHHHHH
T ss_pred CcccccccceeEEEcCCCcEEECcchhheeccCCC--------------ceeecccCCCCCcCCcHHhcC-CCCCcceee
Confidence 99999999999999999999999999997653221 112234679999999999988 569999999
Q ss_pred HHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 619 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 619 wSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||||++|||+| ||......+....... +..++.+...++++.+||++||+.||.+|||+.+|++|
T Consensus 185 wS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~--~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 254 (258)
T d1k2pa_ 185 WAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ--GLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN 254 (258)
T ss_dssp HHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHT--TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred cccchhhHhHHhcCCCCCCCCCHHHHHHHHHh--CCCCCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 999999999986 7877766655444432 33334445667899999999999999999999999987
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.7e-45 Score=408.10 Aligned_cols=248 Identities=20% Similarity=0.274 Sum_probs=202.6
Q ss_pred CCceEEe-eeccCCcEEEEEEEEcc--CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQ-PLGHGGFGHVVLCKNKL--DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~-~LG~G~fG~Vy~a~~~~--~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
++|.+.+ +||+|+||+||+|.++. ++..||||+++.. ......++|.+|+.+|++++|||||+++++|..
T Consensus 8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~------ 80 (285)
T d1u59a_ 8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------ 80 (285)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES------
T ss_pred cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChh-cCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc------
Confidence 5677877 49999999999998864 3558999998743 344556789999999999999999999998721
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
..+|+|||||+ |+|.+++.. ...+++..++.++.||+.||+||
T Consensus 81 -----------------------------------~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yl 125 (285)
T d1u59a_ 81 -----------------------------------EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL 125 (285)
T ss_dssp -----------------------------------SSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CeEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHH
Confidence 23689999997 599998765 45799999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|++||+||||||+|||++.++.+||+|||+|+.+...... .......+||+.|||||++.+ ..++.+
T Consensus 126 H~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~-~~~~~k 192 (285)
T d1u59a_ 126 EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY------------YTARSAGKWPLKWYAPECINF-RKFSSR 192 (285)
T ss_dssp HHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE------------ECCCCSSCCCGGGCCHHHHHH-CEECHH
T ss_pred HhCCeecCcCchhheeeccCCceeeccchhhhcccccccc------------cccccccccCccccChHHHhC-CCCCcc
Confidence 9999999999999999999999999999999875432111 112345579999999999987 579999
Q ss_pred chhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 616 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 616 sDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
+|||||||++|||+| ||......+....+ . .+..++.+...++++.+||.+||+.||++|||+.+|++
T Consensus 193 sDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i-~-~~~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~ 264 (285)
T d1u59a_ 193 SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI-E-QGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ 264 (285)
T ss_dssp HHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHH-H-TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred chhhcchHHHHHHHhCCCCCCCCCCHHHHHHHH-H-cCCCCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 999999999999985 78766555443333 2 34444445567889999999999999999999999975
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-44 Score=412.35 Aligned_cols=269 Identities=22% Similarity=0.389 Sum_probs=208.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|+++++||+|+||+||+|+++.+|+.||||++...........++.+|+.+|+.++||||+++++++......
T Consensus 9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~---- 84 (318)
T d3blha1 9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASP---- 84 (318)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccc----
Confidence 5899999999999999999999999999999999976655545567789999999999999999999988543100
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVF-ESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l-~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
.......+|++||||++++.... .....+++..++.++.||+.||.|||++
T Consensus 85 ----------------------------~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~ 136 (318)
T d3blha1 85 ----------------------------YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN 136 (318)
T ss_dssp ----------------------------------CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ----------------------------ccccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccC
Confidence 00123568999999987655544 4566799999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++.+||+|||+|+.+....... .....+.+||+.|+|||++.+...|+.++||
T Consensus 137 ~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~-----------~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~Di 205 (318)
T d3blha1 137 KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ-----------PNRYTNRVVTLWYRPPELLLGERDYGPPIDL 205 (318)
T ss_dssp TEECCCCCGGGEEECTTSCEEECCCTTCEECCC----------------CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHH
T ss_pred CEEecCcCchheeecCCCcEEeeecceeeecccccccc-----------cccccceecCHHHhhHHHHcCCCCCCcHHHc
Confidence 99999999999999999999999999998654322111 0112346899999999999876679999999
Q ss_pred HHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCcc-----------------------------ccCCHHHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW-----------------------------VAKFSEQESLL 666 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~-----------------------------~~~~~~l~~LI 666 (1196)
|||||++|||++ ||.+..............+..++.. ...++.+.+||
T Consensus 206 wSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl 285 (318)
T d3blha1 206 WGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLI 285 (318)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHH
T ss_pred ccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHH
Confidence 999999999996 8876555444333322222211110 11245778999
Q ss_pred HHcccCCCCCCCCHHHHHhccCCCC
Q 000993 667 RRLMSPSPSDRPSATELLQDALPPQ 691 (1196)
Q Consensus 667 ~~cL~~dP~~RPta~eiL~~~~~~~ 691 (1196)
.+||+.||++|||++|+|+||||..
T Consensus 286 ~~mL~~dP~~R~sa~elL~Hpff~~ 310 (318)
T d3blha1 286 DKLLVLDPAQRIDSDDALNHDFFWS 310 (318)
T ss_dssp HHHSCSSTTTSCCHHHHHHSGGGSS
T ss_pred HHHCcCChhHCcCHHHHHcChhhcc
Confidence 9999999999999999999999975
|
| >d1qe0a2 d.104.1.1 (A:1-325) Histidyl-tRNA synthetase (HisRS) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Histidyl-tRNA synthetase (HisRS) species: Staphylococcus aureus [TaxId: 1280]
Probab=100.00 E-value=3e-45 Score=419.35 Aligned_cols=298 Identities=15% Similarity=0.157 Sum_probs=210.3
Q ss_pred cCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC-Cc---ccccceEEEeecCCceEeecCCC
Q 000993 738 NRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CP---QFKRNTVKLLTHGGDLLELSHEL 809 (1196)
Q Consensus 738 ~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~---~~~~~my~f~D~~G~~laLRPD~ 809 (1196)
-+.|+|++|++|.++..++++++.++++|++|||++|.||+| ++... |+ ...++||+|.|+.|+.++||||+
T Consensus 2 ~~lP~G~rD~lp~~~~~~~~i~~~l~~~f~~~Gy~~I~tP~lE~~d~l~~~~g~~~~~~~~~~~~~~d~~~~~~~lr~d~ 81 (325)
T d1qe0a2 2 IKIPRGTQDILPEDSKKWRYIENQLDELMTFYNYKEIRTPIFESTDLFARGVGDSTDVVQKEMYTFKDKGDRSITLRPEG 81 (325)
T ss_dssp CCCCTTCCCBCHHHHHHHHHHHHHHHHHHHHHTCEECBCCSEEEHHHHCC-----------CCEEECHHHHCCEEECSCS
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHcCCeEeeCcccccHHHhccccCCchhHHHHHHhhhhccccccccccccc
Confidence 468999999999999999999999999999999999999999 33332 33 35789999999999999999999
Q ss_pred cHHHHHHHHhCC-----CCceeEEEecCeeecCCCCCCC-cceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceE
Q 000993 810 RLPFIRWAISNQ-----KSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCD 883 (1196)
Q Consensus 810 T~~iaR~~a~~~-----~~P~r~~Y~G~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~ 883 (1196)
|+|++|.++.+. ..|+|+||+|+|||+++++.++ +||+|+|+|+||..++.+|+|+|.++.++++.+|+++ +.
T Consensus 82 t~~~~r~~~~~~~~~~~~~p~R~~Y~g~VfR~~~~~~~~~rE~~Q~G~EiiG~~~~~ad~Eii~l~~~~l~~~g~~~-~~ 160 (325)
T d1qe0a2 82 TAAVVRSYIEHKMQGNPNQPIKLYYNGPMFRYERKQKGRYRQFNQFGVEAIGAENPSVDAEVLAMVMHIYQSFGLKH-LK 160 (325)
T ss_dssp HHHHHHHHHHTTGGGCSSCSEEEEEEEEEECC-------CCEEEEEEEEEESCCCHHHHHHHHHHHHHHHHHTTCCC-EE
T ss_pred cccHHHHHHhhccccccccchhhheecceeeeccccCCccceeeecceeecCCcCcHHHHHHHHHHHHHHHhhCCcC-cc
Confidence 999999877642 3599999999999998877655 5699999999999999999999999999999999986 99
Q ss_pred EEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHhcCC
Q 000993 884 IHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLA--EAVVNRLQTVGLRFCGA 961 (1196)
Q Consensus 884 i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~--~~~~~~l~~l~~~~~g~ 961 (1196)
+.|||.+++..+++......+ .+....... . + +. ........+. ....+...
T Consensus 161 i~i~~~~~~~~~~~~~~~~~~-------~~~~~~~~~---~--~----~~-~~~~~~~~~~~~~~~~~~~~--------- 214 (325)
T d1qe0a2 161 LVINSVGDMASRKEYNEALVK-------HFEPVIHEF---C--S----DC-QSRLHTDPMRILDCKVDRDK--------- 214 (325)
T ss_dssp EEEEECCCHHHHHHHHHHHHH-------HHGGGGGGS---C--H----HH-HHTTTTCGGGGC-----------------
T ss_pred eeecccccHHHHHHHHHHHHH-------HHHHHHHHH---H--H----Hh-hhhhhcchhhhhhhhcchhH---------
Confidence 999999888777665432111 111111000 0 0 00 0000000000 00011111
Q ss_pred hhhHHHHHhccC-CCChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCcccccccccccccc
Q 000993 962 ADQALPRLRGAL-PADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGG 1038 (1196)
Q Consensus 962 ~~~~l~~l~~~~-~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GG 1038 (1196)
..++.+.... .......+.++.+ .+..+++ .+.+|++++||++||||+||++|+.+.+. .+..++||+||
T Consensus 215 --~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~D~s~~rg~~YYTGivFe~~~~~~~~---~g~~~~i~~GG 287 (325)
T d1qe0a2 215 --EAIKTAPRITDFLNEESKAYYEQVKAYLDDLGI--PYTEDPNLVRGLDYYTHTAFELMMDNPNY---DGAITTLCGGG 287 (325)
T ss_dssp ------CCCCGGGCCCTTHHHHHHHHHHHHHHHTC--CCEECTTCCCCCTTEEEEEEEEEEECTTS---TTSEEEEEEEE
T ss_pred --HHHHhhhhhhhhhhhhHHHHHHHHHHHHHhhhh--hhhcccccccCCCCcCCeEEEEEecCCCC---CCccCceeccc
Confidence 1111111111 1223345556666 5666665 68899999999999999999999987543 12335799999
Q ss_pred ccchhhhhccccccccccCCCCCCCcceecccHHHHHhhcc
Q 000993 1039 RYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYP 1079 (1196)
Q Consensus 1039 RYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~ 1079 (1196)
|||+|+++||++ +.||||||+++|||+.+|+
T Consensus 288 RYD~L~~~f~~~----------~~pAvGfsi~ld~L~~~l~ 318 (325)
T d1qe0a2 288 RYNGLLELLDGP----------SETGIGFALSIERLLLALE 318 (325)
T ss_dssp EEESHHHHTTCC----------CCEEEEEEEEHHHHHHHHH
T ss_pred cHHHHHHHcCCC----------CCCeEEEEeeHHHHHHHHH
Confidence 999999999653 4699999999999999986
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-44 Score=414.44 Aligned_cols=257 Identities=26% Similarity=0.390 Sum_probs=206.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
-+|+.+++||+|+||+||+|+++.+|+.||||+++..... ..+|+.+|+.++|||||+++++|...+.
T Consensus 20 ~~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~------~~~Ei~il~~l~h~niv~~~~~~~~~~~------ 87 (350)
T d1q5ka_ 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF------KNRELQIMRKLDHCNIVRLRYFFYSSGE------ 87 (350)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS------CCHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred CCcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH------HHHHHHHHHhcCCCCCCcEEEEEEecCc------
Confidence 4799999999999999999999999999999999754322 3479999999999999999999865321
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE----SYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~----~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
..+..++|+|||||++++.+.+. ....+++.+++.++.||+.||+|||
T Consensus 88 ----------------------------~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH 139 (350)
T d1q5ka_ 88 ----------------------------KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139 (350)
T ss_dssp ----------------------------CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------cCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 12356789999999987655543 4557999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCC-CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 537 GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
++||+||||||+|||++.++ .+||+|||+|+...... ...+.+||+.|+|||.+.+...|+.+
T Consensus 140 ~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~~~~~ 203 (350)
T d1q5ka_ 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------PNVSYICSRYYRAPELIFGATDYTSS 203 (350)
T ss_dssp TTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTS----------------CCCSCCSCTTSCCHHHHTTCSSCCTH
T ss_pred hcCCcccCCCcceEEEecCCCceeEecccchhhccCCc----------------ccccccccccccChHHhhcccCCCcc
Confidence 99999999999999999875 89999999998653221 12346899999999998876679999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcC-----------------CCC---------CccccCCHHHHHHH
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG-----------------ELP---------PSWVAKFSEQESLL 666 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~-----------------~~p---------~~~~~~~~~l~~LI 666 (1196)
+||||+||++|||++ ||...........+....+ .++ ......++++.+||
T Consensus 204 ~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl 283 (350)
T d1q5ka_ 204 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALC 283 (350)
T ss_dssp HHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHH
T ss_pred eeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHH
Confidence 999999999999996 7876554443333221100 111 01224567899999
Q ss_pred HHcccCCCCCCCCHHHHHhccCCCCch
Q 000993 667 RRLMSPSPSDRPSATELLQDALPPQME 693 (1196)
Q Consensus 667 ~~cL~~dP~~RPta~eiL~~~~~~~~~ 693 (1196)
++||..||.+|||+.|+|+||||+++.
T Consensus 284 ~~mL~~dP~~R~ta~e~L~Hp~f~~~~ 310 (350)
T d1q5ka_ 284 SRLLEYTPTARLTPLEACAHSFFDELR 310 (350)
T ss_dssp HHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred HHHccCChhHCcCHHHHhcCHhhcccc
Confidence 999999999999999999999998653
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.5e-44 Score=401.07 Aligned_cols=258 Identities=26% Similarity=0.436 Sum_probs=211.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|+++++||+|+||+||+|+++.+|+.||||+++..........++.+|+.+|+.++|||||+++++|.+
T Consensus 1 ~~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~-------- 72 (292)
T d1unla_ 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-------- 72 (292)
T ss_dssp CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC--------
T ss_pred CCCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeecccccc--------
Confidence 478999999999999999999999999999999998766555667889999999999999999999988843
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
...++++|+++.+ +|..++...+.+++..++.++.|++.||+|||++
T Consensus 73 --------------------------------~~~~~iv~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~ 120 (292)
T d1unla_ 73 --------------------------------DKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120 (292)
T ss_dssp --------------------------------SSEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------ccceeEEeeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcC
Confidence 4567999999976 6777777888899999999999999999999999
Q ss_pred CCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchh
Q 000993 539 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 618 (1196)
Q Consensus 539 gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDV 618 (1196)
||+||||||+|||++.++++||+|||.|+...... .......+++.|+|||++.+...++.++||
T Consensus 121 ~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~---------------~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di 185 (292)
T d1unla_ 121 NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV---------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDM 185 (292)
T ss_dssp TEECCCCSGGGEEECTTCCEEECCCTTCEECCSCC---------------SCCCSCCSCGGGCCHHHHTTCSCCCTHHHH
T ss_pred CEeeecccCcccccccCCceeeeecchhhcccCCC---------------ccceeeccccchhhhhHhccCCCCCchhhc
Confidence 99999999999999999999999999998653221 112344678999999999876668999999
Q ss_pred HHHHHHHHHhhc---CCchhH-HHHHHHHHhhhcC--------------------------CCCCccccCCHHHHHHHHH
Q 000993 619 YSLGIVFFELWH---PFSTAM-ERQIVLSDLKQKG--------------------------ELPPSWVAKFSEQESLLRR 668 (1196)
Q Consensus 619 wSlGviLyELlt---Pf~~~~-~~~~~~~~l~~~~--------------------------~~p~~~~~~~~~l~~LI~~ 668 (1196)
|||||++|||++ ||.... ..+.......... .........++.+.+||++
T Consensus 186 wSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~ 265 (292)
T d1unla_ 186 WSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQN 265 (292)
T ss_dssp HHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHH
T ss_pred cccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHH
Confidence 999999999997 654332 2222221111111 0111223345788999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCc
Q 000993 669 LMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||+.||.+|||++|+|+||||++.
T Consensus 266 mL~~dP~~R~sa~e~L~Hp~f~~~ 289 (292)
T d1unla_ 266 LLKCNPVQRISAEEALQHPYFSDF 289 (292)
T ss_dssp HSCSSGGGSCCHHHHTTSGGGSSC
T ss_pred HccCChhHCcCHHHHhcChhhcCC
Confidence 999999999999999999999864
|
| >d1kmma2 d.104.1.1 (A:4-325) Histidyl-tRNA synthetase (HisRS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Histidyl-tRNA synthetase (HisRS) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.6e-44 Score=410.98 Aligned_cols=298 Identities=16% Similarity=0.156 Sum_probs=207.8
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccceee----cCC-C---cccccceEEEeecCCceEeecCCCc
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYL----LGD-C---PQFKRNTVKLLTHGGDLLELSHELR 810 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~----~~~-~---~~~~~~my~f~D~~G~~laLRPD~T 810 (1196)
+.++|++|++|.++.+++++++.++++|++|||++|.||+|++ ... | +...+.+|+|.|.+|+.++||||+|
T Consensus 3 ~~~~G~~D~lp~~~~~~~~i~~~l~~~f~~~Gy~~I~tP~lE~~d~~~~~~g~~~~~~~~~~~~~~d~~g~~l~Lr~D~T 82 (322)
T d1kmma2 3 QAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTFEDRNGDSLTLRPEGT 82 (322)
T ss_dssp CCCTTCCCBCHHHHHHHHHHHHHHHHHHHTTTCEECBCCSEEEHHHHHHHHCTTSHHHHHTCEEEECTTSCEEEECSCSH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeEeECcccccHHHhhcccCcchhhhHHHHhhhhhccccccccccccc
Confidence 4679999999999999999999999999999999999999932 222 2 3357899999999999999999999
Q ss_pred HHHHHHHHhCC---CCceeEEEecCeeecCCCCCCCc-ceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEe
Q 000993 811 LPFIRWAISNQ---KSSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHL 886 (1196)
Q Consensus 811 ~~iaR~~a~~~---~~P~r~~Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~L 886 (1196)
+|+||+++++. ..|.|+||+|+|||+++++.++. ||+|+|+|+||.++..+|+|+|.++.++|+.+|+.+...+.+
T Consensus 83 ~~iaR~~~~~~~~~~~p~r~~y~g~v~r~~~~~~gr~re~~Q~g~EiiG~~~~~ad~Eii~l~~~~l~~lgl~~~~~~~~ 162 (322)
T d1kmma2 83 AGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLEL 162 (322)
T ss_dssp HHHHHHHHHTTCSTTCCEEEEEEEEEECCCCCBTTBCSEEEEEEEEEESCCSHHHHHHHHHHHHHHHHHHTCGGGCEEEE
T ss_pred chhhHHHHhhhhhhhhhhhHhhcccccccCCCCCCccchhhhhhHHHhccccchhHHHHHHHHHHHHHhcCCCceeEEec
Confidence 99999998864 45999999999999988876554 699999999999999999999999999999999986444455
Q ss_pred CcHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHH
Q 000993 887 NHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQAL 966 (1196)
Q Consensus 887 g~~~i~~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l 966 (1196)
++........ .....+.+.+........ + ....... ...+..+. ...+......
T Consensus 163 ~~~~~~~~~~-------~~~~~l~~~~~~~~~~l~-----~----~~~~~~~---------~~~~~~l~-~~~~~~~~~~ 216 (322)
T d1kmma2 163 NSIGSLEARA-------NYRDALVAFLEQHKEKLD-----E----DCKRRMY---------TNPLRVLD-SKNPEVQALL 216 (322)
T ss_dssp EECCCHHHHH-------HHHHHHHHHHHHC--------------------------------------------------
T ss_pred cccchHHHHH-------HHHHHHHHHHHHHHHhhh-----H----HHHHHHh---------hhhhhhhh-ccchHHHHHH
Confidence 5533222111 122333333333211000 0 0000000 00011111 0001101111
Q ss_pred HHHhccC-CCChHHHHHHHHH--HHHHcCCCceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchh
Q 000993 967 PRLRGAL-PADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1043 (1196)
Q Consensus 967 ~~l~~~~-~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L 1043 (1196)
+.+.... .......+.+..+ .+...++ .+.+|++++|+++||||+||++|+.+.+. .++||+|||||+|
T Consensus 217 ~~~~~~~~~~~~~~~~~l~~~~~~l~~~~i--~~~id~~~~r~~~YYtGivFe~~~~~~g~------~~~i~~GGRYD~L 288 (322)
T d1kmma2 217 NDAPALGDYLDEESREHFAGLCKLLESAGI--AYTVNQRLVRGLDYYNRTVFEWVTNSLGS------QGTVCAGGRYDGL 288 (322)
T ss_dssp ----CGGGTCCHHHHHHHHHHHHHHHHHTC--CEEECTTCCCSSSCCCSEEEEEECTTCSS------SSEEEEEEECTTH
T ss_pred HHHhhcchhhhhHHHHHHHHHHHHhhhcce--eeeeecccccCCCCCCCcEEEEEeCCCCC------cCeeecccchHHH
Confidence 1111111 1122333444444 6666776 68999999999999999999999987543 2479999999999
Q ss_pred hhhccccccccccCCCCCCCcceecccHHHHHhhccC
Q 000993 1044 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV 1080 (1196)
Q Consensus 1044 ~~~fg~~~~~~~~g~~~~~pAvGfaiglerl~~~L~~ 1080 (1196)
+++||++ ++||||||+++|||+.+|++
T Consensus 289 ~~~f~g~----------~~pAvGfsi~ld~l~~~l~~ 315 (322)
T d1kmma2 289 VEQLGGR----------ATPAVGFAMGLERLVLLVQA 315 (322)
T ss_dssp HHHTTSC----------CCCEEEEEEEHHHHHHHHHH
T ss_pred HHhcCCC----------CCCeEEEEecHHHHHHHHHh
Confidence 9999654 46999999999999998863
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-44 Score=404.52 Aligned_cols=251 Identities=24% Similarity=0.342 Sum_probs=196.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~-----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~ 454 (1196)
++|++.++||+|+||+||+|++.. +++.||||+++.. ......+.+.+|+..+.++ +|||||.+++++.+.
T Consensus 13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~-- 89 (299)
T d1ywna1 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP-- 89 (299)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC-----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST--
T ss_pred HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccc-cCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccC--
Confidence 689999999999999999999864 3578999998643 3334556788888888887 689999999887432
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------------CCCC
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DHFD 517 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~l~ 517 (1196)
...+++|||||+ |+|.+++... ..++
T Consensus 90 -------------------------------------~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~ 132 (299)
T d1ywna1 90 -------------------------------------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 132 (299)
T ss_dssp -------------------------------------TSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBC
T ss_pred -------------------------------------CCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCC
Confidence 345799999997 6999998643 2488
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcccc
Q 000993 518 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 597 (1196)
Q Consensus 518 e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT 597 (1196)
+.+++.++.||++||+|||++||+||||||+||||+.++++||+|||+|+....... ....+..+||
T Consensus 133 ~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~-------------~~~~~~~~gt 199 (299)
T d1ywna1 133 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-------------YVRKGDARLP 199 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECC------CCSCTT-------------SCCTTSCCCG
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCCCcEEEccCcchhhcccccc-------------ccccCceeeC
Confidence 999999999999999999999999999999999999999999999999986432210 1123456899
Q ss_pred ccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCC
Q 000993 598 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 673 (1196)
Q Consensus 598 ~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~d 673 (1196)
+.|||||++.+ ..|+.++|||||||++|||++ ||......+.....+. .+..++.+...++++.+||.+||+.|
T Consensus 200 ~~y~APE~l~~-~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~d 277 (299)
T d1ywna1 200 LKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK-EGTRMRAPDYTTPEMYQTMLDCWHGE 277 (299)
T ss_dssp GGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHH-HTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred ccccchhHhhc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHh-cCCCCCCCccCCHHHHHHHHHHcCCC
Confidence 99999999988 679999999999999999985 6665544444444444 33344444567789999999999999
Q ss_pred CCCCCCHHHHHhc
Q 000993 674 PSDRPSATELLQD 686 (1196)
Q Consensus 674 P~~RPta~eiL~~ 686 (1196)
|.+|||+.++++|
T Consensus 278 P~~Rpt~~eil~~ 290 (299)
T d1ywna1 278 PSQRPTFSELVEH 290 (299)
T ss_dssp GGGSCCHHHHHHH
T ss_pred hhHCcCHHHHHHH
Confidence 9999999999987
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.5e-44 Score=399.89 Aligned_cols=251 Identities=23% Similarity=0.319 Sum_probs=198.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||+||+|+++ +++.||||+++.... ..+.|.+|+.+|++++|||||+++++|.+
T Consensus 16 ~~~~~i~~~iG~G~fg~Vy~~~~~-~~~~vAiK~l~~~~~---~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-------- 83 (285)
T d1fmka3 16 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-------- 83 (285)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEECCTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred HHHEEEeeEEeeCCCeEEEEEEEC-CCCEEEEEEECcccC---CHHHHHHHHHHHHhcccCCEeEEEEEEec--------
Confidence 378999999999999999999997 456799999874433 34679999999999999999999998722
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
..+|+|||||+ |+|..++.. ...+++.+++.++.||+.||+|||
T Consensus 84 ---------------------------------~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH 130 (285)
T d1fmka3 84 ---------------------------------EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 130 (285)
T ss_dssp ---------------------------------SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHh
Confidence 23589999997 578877754 357999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
++||+||||||+||||+.++++||+|||+|+.+..... .......||+.|+|||++.. ..++.++
T Consensus 131 ~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~-~~~~~ks 195 (285)
T d1fmka3 131 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY--------------TARQGAKFPIKWTAPEAALY-GRFTIKS 195 (285)
T ss_dssp HTTCCCSCCSGGGEEECGGGCEEECCCCTTC----------------------------CCGGGSCHHHHHH-CCCCHHH
T ss_pred hhheecccccceEEEECCCCcEEEcccchhhhccCCCc--------------eeeccccccccccChHHHhC-CCCCcHH
Confidence 99999999999999999999999999999986532211 12234579999999999987 6789999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh--ccCCCC
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ--DALPPQ 691 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~--~~~~~~ 691 (1196)
|||||||+||||++ ||............+. ....++.....++++.+||.+||+.||++|||+++|++ ++|+..
T Consensus 196 DI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~ 274 (285)
T d1fmka3 196 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 274 (285)
T ss_dssp HHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-TTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred hhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHH-hcCCCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcC
Confidence 99999999999996 4444333333333333 23334455567789999999999999999999999987 555543
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-43 Score=407.96 Aligned_cols=263 Identities=23% Similarity=0.335 Sum_probs=206.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++++.||+|+||+||+|+++.+|+.||||+++... .....+++.+|+.+|+.++||||+++++++....
T Consensus 8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~------- 79 (345)
T d1pmea_ 8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPT------- 79 (345)
T ss_dssp TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTT-CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSS-------
T ss_pred CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhc-ChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeecc-------
Confidence 56999999999999999999999999999999997433 3445668899999999999999999999884321
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
.....++|++|++++++|.+++.. .++++..++.++.||+.||+|||++||
T Consensus 80 ----------------------------~~~~~~~~l~~~~~~g~L~~~l~~-~~l~~~~i~~i~~qil~al~yLH~~~i 130 (345)
T d1pmea_ 80 ----------------------------IEQMKDVYLVTHLMGADLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 130 (345)
T ss_dssp ----------------------------TTTCCCEEEEEECCCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred ----------------------------ccccceEEEEEeecCCchhhhhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 012345677777777899999865 479999999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+||||||+|||++.++.+||+|||+|+......... ......+||+.|+|||++.....|+.++||||
T Consensus 131 iHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwS 198 (345)
T d1pmea_ 131 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT------------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 198 (345)
T ss_dssp ECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBC------------CTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHH
T ss_pred cCCCCCcceEEECCCCCEEEcccCceeeccCCCccc------------eeeccccccceechHHHhhcCCCCCchhhhhc
Confidence 999999999999999999999999998654332111 11245689999999999876567899999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhh------------------------cCCCC----CccccCCHHHHHHHHHc
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQ------------------------KGELP----PSWVAKFSEQESLLRRL 669 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~------------------------~~~~p----~~~~~~~~~l~~LI~~c 669 (1196)
+||++|||++ ||............... ....+ ..+...++++.+||.+|
T Consensus 199 lG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~ 278 (345)
T d1pmea_ 199 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 278 (345)
T ss_dssp HHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHH
T ss_pred cCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHH
Confidence 9999999996 88654433222211110 00011 12334567899999999
Q ss_pred ccCCCCCCCCHHHHHhccCCCCc
Q 000993 670 MSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 670 L~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
|+.||.+|||+.++|+||||.+.
T Consensus 279 L~~dP~~R~ta~e~L~hpf~~~~ 301 (345)
T d1pmea_ 279 LTFNPHKRIEVEQALAHPYLEQY 301 (345)
T ss_dssp SCSSTTTSCCHHHHHTSGGGTTT
T ss_pred ccCChhHCcCHHHHhcCHhhccC
Confidence 99999999999999999998865
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.9e-44 Score=399.18 Aligned_cols=247 Identities=23% Similarity=0.336 Sum_probs=193.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCC---cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDG---RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g---~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~ 457 (1196)
++|++.+.||+|+||+||+|++..++ ..||||+++.. ......+.+.+|+.+|+.++|||||+++++|.+
T Consensus 7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~------ 79 (273)
T d1mp8a_ 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVITE------ 79 (273)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT-TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS------
T ss_pred HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccc-cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec------
Confidence 68999999999999999999987543 46888887532 334445679999999999999999999998721
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHI 535 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yL 535 (1196)
..+|+|||||+ |+|.+++.. ...+++..++.++.||++||+||
T Consensus 80 -----------------------------------~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~yl 124 (273)
T d1mp8a_ 80 -----------------------------------NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 124 (273)
T ss_dssp -----------------------------------SSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhh
Confidence 34689999997 588887654 45699999999999999999999
Q ss_pred HhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 536 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 536 Hs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
|+++|+||||||+||+++.++.+||+|||+|+...... ....+...||+.|+|||++.+ ..|+.+
T Consensus 125 H~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~--------------~~~~~~~~gt~~y~apE~l~~-~~~~~~ 189 (273)
T d1mp8a_ 125 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST--------------YYKASKGKLPIKWMAPESINF-RRFTSA 189 (273)
T ss_dssp HHTTCCCSCCSGGGEEEEETTEEEECC---------------------------------CCGGGCCHHHHHH-CCCSHH
T ss_pred cccCeeccccchhheeecCCCcEEEccchhheeccCCc--------------ceeccceecCcccchhhHhcc-CCCCCc
Confidence 99999999999999999999999999999998654221 112234578999999999987 579999
Q ss_pred chhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 616 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 616 sDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
+|||||||++|||++ ||......+...... .+..++.+...++++.+||.+||+.||.+|||+.+|+++
T Consensus 190 ~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~ 262 (273)
T d1mp8a_ 190 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE--NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 262 (273)
T ss_dssp HHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cccccchHHHHHHHhcCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 999999999999985 776665555444333 334445556778899999999999999999999999976
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.9e-44 Score=405.30 Aligned_cols=248 Identities=24% Similarity=0.360 Sum_probs=195.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc----EEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGR----HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
++|+++++||+|+||+||+|++..+|+ .||+|+++.. .+....+++.+|+.+|+.++|||||+++++|.+.
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~---- 83 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---- 83 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC-----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS----
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccc-cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC----
Confidence 579999999999999999999988876 5788877533 3334567899999999999999999999998431
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
..+++||||. ++|.+.+.. ...+++..++.++.||+.||+|
T Consensus 84 -------------------------------------~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~y 126 (317)
T d1xkka_ 84 -------------------------------------TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 126 (317)
T ss_dssp -------------------------------------SEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CeeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHH
Confidence 2467777775 688887765 4579999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++++||+|||+|+....... ........||+.|||||++.+ ..|+.
T Consensus 127 LH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-------------~~~~~~~~gt~~y~APE~l~~-~~~~~ 192 (317)
T d1xkka_ 127 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK-------------EYHAEGGKVPIKWMALESILH-RIYTH 192 (317)
T ss_dssp HHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC---------------------CCTTTSCHHHHHH-CCCCH
T ss_pred HHHcCcccCcchhhcceeCCCCCeEeeccccceecccccc-------------cccccccccCccccChHHHhc-CCCCh
Confidence 9999999999999999999999999999999987643211 112234578999999999988 57999
Q ss_pred cchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 615 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 615 ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
++|||||||+||||+| ||......+. ...+. .+..++.+...++++.+||.+||+.||.+|||+.+|++|
T Consensus 193 ~sDvwS~Gvil~el~t~g~~p~~~~~~~~~-~~~i~-~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 266 (317)
T d1xkka_ 193 QSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILE-KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 266 (317)
T ss_dssp HHHHHHHHHHHHHHHTTSCCTTTTSCGGGH-HHHHH-HTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHCCCCCCCCCCHHHH-HHHHH-cCCCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence 9999999999999996 6655443333 22332 334444445677899999999999999999999999987
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.5e-43 Score=400.84 Aligned_cols=248 Identities=21% Similarity=0.320 Sum_probs=205.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~-----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
++|++++.||+|+||+||+|+++. +++.||||+++.. .......++.+|+.+|+.++||||++++++|.+
T Consensus 13 ~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~-~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~---- 87 (301)
T d1lufa_ 13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE-ASADMQADFQREAALMAEFDNPNIVKLLGVCAV---- 87 (301)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS----
T ss_pred HHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChh-cChHHHHHHHHHHHHHHhcCCCCcccceeeecc----
Confidence 689999999999999999999863 5679999998743 344456789999999999999999999998843
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--------------------
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-------------------- 514 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-------------------- 514 (1196)
...++++||||+ |+|.+++....
T Consensus 88 ------------------------------------~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 131 (301)
T d1lufa_ 88 ------------------------------------GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS 131 (301)
T ss_dssp ------------------------------------SSSCEEEEECCTTCBHHHHHHHTCC-------------------
T ss_pred ------------------------------------CCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccc
Confidence 345689999996 69999886432
Q ss_pred ----CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCcccc
Q 000993 515 ----HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 590 (1196)
Q Consensus 515 ----~l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~ 590 (1196)
.+++..++.++.||+.||+|||+++||||||||+|||++.++++||+|||+|+........ ..
T Consensus 132 ~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~-------------~~ 198 (301)
T d1lufa_ 132 PGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY-------------KA 198 (301)
T ss_dssp ---CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCB-------------C-
T ss_pred cCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEECCCCcEEEccchhheeccCCccc-------------cc
Confidence 3888999999999999999999999999999999999999999999999999876433211 12
Q ss_pred CcCccccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHH
Q 000993 591 GTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLL 666 (1196)
Q Consensus 591 ~~~~~GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI 666 (1196)
.++..||+.|||||.+.+ ..|+.++|||||||+||||++ ||......+...... .+..++.+...++++.+||
T Consensus 199 ~~~~~~~~~y~aPE~~~~-~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~--~~~~~~~p~~~~~~~~~li 275 (301)
T d1lufa_ 199 DGNDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVR--DGNILACPENCPLELYNLM 275 (301)
T ss_dssp ---CCBCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH--TTCCCCCCTTCCHHHHHHH
T ss_pred cCCCCcCcCcCCHHHHcc-CCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHH--cCCCCCCCccchHHHHHHH
Confidence 245679999999999998 579999999999999999985 676666665554433 3445555567788999999
Q ss_pred HHcccCCCCCCCCHHHHHh
Q 000993 667 RRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 667 ~~cL~~dP~~RPta~eiL~ 685 (1196)
.+||+.||++|||+.+|++
T Consensus 276 ~~cl~~~P~~RPt~~ev~~ 294 (301)
T d1lufa_ 276 RLCWSKLPADRPSFCSIHR 294 (301)
T ss_dssp HHHTCSSGGGSCCHHHHHH
T ss_pred HHHcCCChhHCcCHHHHHH
Confidence 9999999999999999976
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-43 Score=401.85 Aligned_cols=248 Identities=23% Similarity=0.351 Sum_probs=201.2
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcE--EEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCcc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRH--YAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~--vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~~ 455 (1196)
..++|++.++||+|+||+||+|+++.+|.. ||||+++.. ......+.+.+|+.+|+++ +|||||+++++|.+
T Consensus 8 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~---- 82 (309)
T d1fvra_ 8 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH---- 82 (309)
T ss_dssp CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEE----
T ss_pred CHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcc-cChHHHHHHHHHHHHHHhccCCCCEeeEEEEEec----
Confidence 457999999999999999999999988875 667776532 2223456799999999999 79999999999843
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------------CCCCH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DHFDK 518 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~l~e 518 (1196)
...+|+|||||+ |+|.++++.. ..+++
T Consensus 83 ------------------------------------~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 126 (309)
T d1fvra_ 83 ------------------------------------RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 126 (309)
T ss_dssp ------------------------------------TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCH
T ss_pred ------------------------------------CCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCH
Confidence 456899999997 6999998654 56999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccc
Q 000993 519 ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTY 598 (1196)
Q Consensus 519 ~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~ 598 (1196)
.+++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||+|+...... ......||+
T Consensus 127 ~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~----------------~~~~~~gt~ 190 (309)
T d1fvra_ 127 QQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV----------------KKTMGRLPV 190 (309)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEEC----------------CC----CCT
T ss_pred HHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCceEEccccccccccccc----------------cccceecCC
Confidence 9999999999999999999999999999999999999999999999997543211 123457899
Q ss_pred cCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCC
Q 000993 599 FYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 674 (1196)
Q Consensus 599 ~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP 674 (1196)
.|+|||.+.+ ..|+.++|||||||++|||++ ||......+.... +. .+..++.+...++++++||.+||+.||
T Consensus 191 ~y~aPE~l~~-~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~-i~-~~~~~~~~~~~~~~~~~li~~cl~~dP 267 (309)
T d1fvra_ 191 RWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK-LP-QGYRLEKPLNCDDEVYDLMRQCWREKP 267 (309)
T ss_dssp TTCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH-GG-GTCCCCCCTTBCHHHHHHHHHHTCSSG
T ss_pred cccchHHhcc-CCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHH-HH-hcCCCCCCccCCHHHHHHHHHHcCCCh
Confidence 9999999988 579999999999999999986 5655544444433 33 334455556678899999999999999
Q ss_pred CCCCCHHHHHhc
Q 000993 675 SDRPSATELLQD 686 (1196)
Q Consensus 675 ~~RPta~eiL~~ 686 (1196)
++|||+.+|+++
T Consensus 268 ~~RPs~~eil~~ 279 (309)
T d1fvra_ 268 YERPSFAQILVS 279 (309)
T ss_dssp GGSCCHHHHHHH
T ss_pred hHCcCHHHHHHH
Confidence 999999999976
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-43 Score=408.94 Aligned_cols=260 Identities=28% Similarity=0.382 Sum_probs=201.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
+++|+++++||+|+||+||+|+++.+|+.||||+++....+.....++.+|+.+|+.++|||||+++++|...+.
T Consensus 16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~----- 90 (355)
T d2b1pa1 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKT----- 90 (355)
T ss_dssp ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCS-----
T ss_pred cCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccc-----
Confidence 478999999999999999999999999999999998766665666789999999999999999999999854321
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
.....++|+|||||.+++.+.+. ..+++..++.++.||+.||+|||++|
T Consensus 91 -----------------------------~~~~~~~~iv~Ey~~~~l~~~~~--~~~~~~~i~~~~~qil~gl~~LH~~g 139 (355)
T d2b1pa1 91 -----------------------------LEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG 139 (355)
T ss_dssp -----------------------------TTTCCEEEEEEECCSEEHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -----------------------------cccCceeEEEEeccchHHHHhhh--cCCCHHHHHHHHHHHHHHHHHhhhcc
Confidence 12357899999999988777664 46899999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+|||++.++.+|++|||+++...... ..+..+||+.|+|||++.+ ..++.++|||
T Consensus 140 iiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~----------------~~~~~~~t~~y~aPE~l~~-~~~~~~~Diw 202 (355)
T d2b1pa1 140 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF----------------MMTPYVVTRYYRAPEVILG-MGYKENVDIW 202 (355)
T ss_dssp CCCSCCCGGGEEECTTCCEEECCCCC-------------------------------CCTTCCHHHHTT-CCCCTTHHHH
T ss_pred cccccCCccccccccccceeeechhhhhcccccc----------------ccccccccccccChhhhcC-CCCCCCcccc
Confidence 9999999999999999999999999988643221 2345679999999999998 5799999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCC----------------------C--------------C---Ccccc
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGE----------------------L--------------P---PSWVA 657 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~----------------------~--------------p---~~~~~ 657 (1196)
|+||++|||++ ||.................. . + .....
T Consensus 203 SlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (355)
T d2b1pa1 203 SVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKL 282 (355)
T ss_dssp HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHH
T ss_pred cccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCcccccccccccccccccccccccccc
Confidence 99999999996 77654433322222111100 0 0 00111
Q ss_pred CCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 658 KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 658 ~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
.++++.+||++||..||++|||++|+|+||||+..
T Consensus 283 ~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~ 317 (355)
T d2b1pa1 283 KASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 317 (355)
T ss_dssp HHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred CCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence 23568899999999999999999999999999864
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=2.5e-43 Score=403.60 Aligned_cols=254 Identities=20% Similarity=0.320 Sum_probs=202.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCcccc
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADF 457 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~ 457 (1196)
..++|+++++||+|+||+||+|+++.+|+.||||+++.. ...++.+|+.+|+.++ ||||++++++|...
T Consensus 33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~-----~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~----- 102 (328)
T d3bqca1 33 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDP----- 102 (328)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECT-----
T ss_pred CCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH-----HHHHHHHHHHHHHhccCCCCCcEEEEEEEec-----
Confidence 347899999999999999999999999999999998632 2457889999999995 99999999987421
Q ss_pred CCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 000993 458 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 458 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...++|+|||||++ +|..+ ...+++..++.++.||+.||+|||
T Consensus 103 ---------------------------------~~~~~~~v~e~~~~~~L~~~---~~~l~e~~i~~i~~qil~aL~~LH 146 (328)
T d3bqca1 103 ---------------------------------VSRTPALVFEHVNNTDFKQL---YQTLTDYDIRFYMYEILKALDYCH 146 (328)
T ss_dssp ---------------------------------TTCSEEEEEECCCSCBGGGT---TTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCCceeEEEeecCCCcHHHH---hcCCCHHHHHHHHHHHHHHHHHHh
Confidence 23568999999975 66554 356999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCC-CeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCc
Q 000993 537 GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 615 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~k 615 (1196)
++||+||||||+|||++.++ .+||+|||+|+...... .....+||+.|+|||.+.+...|+.+
T Consensus 147 ~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~----------------~~~~~~~t~~y~aPE~~~~~~~~~~~ 210 (328)
T d3bqca1 147 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ----------------EYNVRVASRYFKGPELLVDYQMYDYS 210 (328)
T ss_dssp HTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTC----------------CCCSCCSCGGGCCHHHHTTCCCCCTH
T ss_pred hcccccccccccceEEcCCCCeeeecccccceeccCCC----------------cccccccCccccCcccccCCCCCCcc
Confidence 99999999999999999765 59999999998653221 12456899999999999886678999
Q ss_pred chhHHHHHHHHHhhc---CCchhHHHH-HHHHHhh-----------h--cC---------------------CCCCcccc
Q 000993 616 ADMYSLGIVFFELWH---PFSTAMERQ-IVLSDLK-----------Q--KG---------------------ELPPSWVA 657 (1196)
Q Consensus 616 sDVwSlGviLyELlt---Pf~~~~~~~-~~~~~l~-----------~--~~---------------------~~p~~~~~ 657 (1196)
+||||+||++|||++ ||....... ....... . .. ........
T Consensus 211 ~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (328)
T d3bqca1 211 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHL 290 (328)
T ss_dssp HHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGG
T ss_pred cchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhccccccccc
Confidence 999999999999996 775432211 1000000 0 00 01112234
Q ss_pred CCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCchH
Q 000993 658 KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 694 (1196)
Q Consensus 658 ~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~~~ 694 (1196)
.++++.+||++||..||.+|||++|+|+||||+.+.+
T Consensus 291 ~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v~~ 327 (328)
T d3bqca1 291 VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK 327 (328)
T ss_dssp CCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTSCC
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCC
Confidence 5678999999999999999999999999999998654
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-43 Score=406.47 Aligned_cols=260 Identities=26% Similarity=0.405 Sum_probs=207.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|+++++||+|+||+||+|+++.+|+.||||+++....+....+++.+|+.+|+.++|||||+++++|.....
T Consensus 17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~----- 91 (348)
T d2gfsa1 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----- 91 (348)
T ss_dssp ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSS-----
T ss_pred CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccc-----
Confidence 368999999999999999999999999999999998666666667789999999999999999999988743210
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
..+...+|++|++++|+|.+++.. +++++.+++.++.||+.||+|||++|
T Consensus 92 -----------------------------~~~~~~~~i~~~~~gg~L~~~~~~-~~l~e~~~~~i~~qil~aL~~LH~~g 141 (348)
T d2gfsa1 92 -----------------------------LEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSAD 141 (348)
T ss_dssp -----------------------------TTTCCCCEEEEECCSEEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -----------------------------cccCceEEEEEeecCCchhhhccc-ccccHHHHHHHHHHHHHHHHHHHhCC
Confidence 012233455555556799998854 57999999999999999999999999
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhH
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 619 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVw 619 (1196)
|+||||||+|||++.++.+|++|||+|..... ...+..||+.|+|||++.+...++.++|||
T Consensus 142 iiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~------------------~~~~~~g~~~y~apE~~~~~~~~~~~~Diw 203 (348)
T d2gfsa1 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIW 203 (348)
T ss_dssp CCCCCCCGGGEEECTTCCEEECCC----CCTG------------------GGSSSCHHHHTSCHHHHTTCSCCCTTHHHH
T ss_pred CcccccCCccccccccccccccccchhcccCc------------------ccccccccccccCchhhcCCccCCcccchh
Confidence 99999999999999999999999999975422 124568999999999988766789999999
Q ss_pred HHHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCC----------------------------CccccCCHHHHHHHHH
Q 000993 620 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP----------------------------PSWVAKFSEQESLLRR 668 (1196)
Q Consensus 620 SlGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p----------------------------~~~~~~~~~l~~LI~~ 668 (1196)
||||++|+|++ ||...........+.......+ ..+...++++.+||++
T Consensus 204 SlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~ 283 (348)
T d2gfsa1 204 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEK 283 (348)
T ss_dssp HHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHH
T ss_pred hhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHH
Confidence 99999999996 7876554443333322211111 0123467789999999
Q ss_pred cccCCCCCCCCHHHHHhccCCCCc
Q 000993 669 LMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 669 cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
||..||.+|||+.|+|+||||.+.
T Consensus 284 mL~~dP~~R~ta~elL~Hp~f~~~ 307 (348)
T d2gfsa1 284 MLVLDSDKRITAAQALAHAYFAQY 307 (348)
T ss_dssp HSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred HCcCChhhCcCHHHHhcCHhhCCC
Confidence 999999999999999999999875
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-43 Score=392.51 Aligned_cols=241 Identities=24% Similarity=0.383 Sum_probs=194.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~ 459 (1196)
.++|++.+.||+|+||.||+|+++ |+.||||+++.. ...+.+.+|+.++++++|||||+++++|.+.
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~----~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~------- 72 (262)
T d1byga_ 6 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE------- 72 (262)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC----C--HHHHHTHHHHTTCCCTTBCCEEEEECCC-------
T ss_pred HHHeEEeEEEecCCCeEEEEEEEC--CeEEEEEEECcH----HHHHHHHHHHHHHHhCCCCCEeeEEEEEEec-------
Confidence 578999999999999999999985 889999998632 2346789999999999999999999988542
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 536 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qIa~gL~yLH 536 (1196)
...+|+|||||+ |+|.+++.... .+++..++.++.||+.||+|||
T Consensus 73 --------------------------------~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH 120 (262)
T d1byga_ 73 --------------------------------KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 120 (262)
T ss_dssp ----------------------------------CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccc
Confidence 234699999996 59999986543 5999999999999999999999
Q ss_pred hCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 537 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 537 s~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
+++|+||||||+|||++.++++||+|||+++..... .....+|+.|+|||++.+ ..++.++
T Consensus 121 ~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~------------------~~~~~~~~~y~aPE~l~~-~~~t~~s 181 (262)
T d1byga_ 121 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST------------------QDTGKLPVKWTAPEALRE-KKFSTKS 181 (262)
T ss_dssp HTTCCCSCCSGGGEEECTTSCEEECCCCC------------------------------CCTTTSCHHHHHH-CCCCHHH
T ss_pred cCceeccccchHhheecCCCCEeecccccceecCCC------------------CccccccccCCChHHHhC-CCCChHH
Confidence 999999999999999999999999999999864311 133468899999999987 5799999
Q ss_pred hhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 617 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 617 DVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
|||||||++|||+| ||......+....+ . .+..|+.....++++++||++||+.||.+|||+.+++++
T Consensus 182 DIwSfG~il~el~t~~~~p~~~~~~~~~~~~i-~-~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~ 253 (262)
T d1byga_ 182 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-E-KGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ 253 (262)
T ss_dssp HHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHH-T-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHH-H-cCCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence 99999999999986 55554444443332 2 334455555677899999999999999999999999875
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-43 Score=393.16 Aligned_cols=250 Identities=25% Similarity=0.365 Sum_probs=195.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC-C--cEEEEEEEecCCC-CchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLD-G--RHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 456 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~-g--~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~ 456 (1196)
++|++++.||+|+||+||+|++..+ + ..||||+++.... .....++|.+|+.+|+.++|||||+++++|.+
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~----- 82 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT----- 82 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-----
Confidence 6899999999999999999987633 3 3689999875432 33445789999999999999999999998732
Q ss_pred cCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHH
Q 000993 457 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAH 534 (1196)
Q Consensus 457 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~y 534 (1196)
..+++|||||+ |++.+.+.. ...+++..++.++.||+.||+|
T Consensus 83 ------------------------------------~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~y 126 (273)
T d1u46a_ 83 ------------------------------------PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126 (273)
T ss_dssp ------------------------------------SSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------cchheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHH
Confidence 23589999997 588877654 4569999999999999999999
Q ss_pred HHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCC
Q 000993 535 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 614 (1196)
Q Consensus 535 LHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ 614 (1196)
||++||+||||||+|||++.++.+||+|||+++.+..... .........||+.|+|||++.+ ..++.
T Consensus 127 lH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~------------~~~~~~~~~~~~~~~aPE~~~~-~~~~~ 193 (273)
T d1u46a_ 127 LESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD------------HYVMQEHRKVPFAWCAPESLKT-RTFSH 193 (273)
T ss_dssp HHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CC------------EEEC-----CCGGGCCHHHHHH-CEEEH
T ss_pred hhhCCEeeeeecHHHhccccccceeeccchhhhhcccCCC------------cceecCccccCcccCCHHHHhC-CCCCc
Confidence 9999999999999999999999999999999987543211 1112234568899999999998 57999
Q ss_pred cchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 615 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 615 ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
++|||||||++|||+| ||......+....... ....++.+...++++.+||.+||+.||++|||+.+|+.
T Consensus 194 ~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~ 267 (273)
T d1u46a_ 194 ASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK-EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD 267 (273)
T ss_dssp HHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT-SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred chhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHh-CCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 9999999999999985 8877766665554444 44455555677889999999999999999999999874
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-43 Score=402.09 Aligned_cols=260 Identities=27% Similarity=0.422 Sum_probs=210.7
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCC--CchhHHHHHHHHHHHHhcCC-CCeeeeeeeeeec
Q 000993 379 YLNDFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRLQH-QHVVRYYQAWFET 452 (1196)
Q Consensus 379 ~~~~y~~~~~LG~G~fG~Vy~a~~~---~~g~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~L~H-pnIV~l~~~~~e~ 452 (1196)
.+++|++++.||+|+||+||+|++. .+|+.||||+++.... .....+.+.+|+.+|++++| |||+++++++.+
T Consensus 22 ~l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~- 100 (322)
T d1vzoa_ 22 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT- 100 (322)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE-
T ss_pred chhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeecc-
Confidence 4689999999999999999999984 4689999999864321 12234568899999999976 899999988732
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHH
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEG 531 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~g 531 (1196)
...+|++||||. |+|.+++.....+.+..++.++.||+.|
T Consensus 101 ---------------------------------------~~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~a 141 (322)
T d1vzoa_ 101 ---------------------------------------ETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLA 141 (322)
T ss_dssp ---------------------------------------TTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHH
T ss_pred ---------------------------------------CCceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHH
Confidence 457899999996 5999999999999999999999999999
Q ss_pred HHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCC-
Q 000993 532 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP- 610 (1196)
Q Consensus 532 L~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~- 610 (1196)
|+|||++||+||||||+|||++.++.+||+|||+|+.+..... ....+..||+.|+|||.+.+..
T Consensus 142 l~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~--------------~~~~~~~g~~~~~~pe~~~~~~~ 207 (322)
T d1vzoa_ 142 LEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET--------------ERAYDFCGTIEYMAPDIVRGGDS 207 (322)
T ss_dssp HHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGG--------------GGGCGGGSCCTTCCHHHHTTCC-
T ss_pred HHHhhcCCEEeccCCccceeecCCCCEEEeeccchhhhccccc--------------ccccccccccccchhHHhhcCCc
Confidence 9999999999999999999999999999999999986533221 1123468999999999997643
Q ss_pred CCCCcchhHHHHHHHHHhhc---CCchhHHHH----HHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCC-----
Q 000993 611 KIDEKADMYSLGIVFFELWH---PFSTAMERQ----IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP----- 678 (1196)
Q Consensus 611 ~~s~ksDVwSlGviLyELlt---Pf~~~~~~~----~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RP----- 678 (1196)
.++.++|||||||+||||++ ||....... +....... .++.+...++++.+||++||++||.+||
T Consensus 208 ~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~---~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~ 284 (322)
T d1vzoa_ 208 GHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS---EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPR 284 (322)
T ss_dssp --CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHC---CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTT
T ss_pred CCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccC---CCCCcccCCHHHHHHHHHHcccCHHHcCCCCcc
Confidence 47889999999999999996 886543322 22222221 2233345778999999999999999999
Q ss_pred CHHHHHhccCCCCchHH
Q 000993 679 SATELLQDALPPQMEYE 695 (1196)
Q Consensus 679 ta~eiL~~~~~~~~~~~ 695 (1196)
|++|+++||||++..+.
T Consensus 285 t~~eil~Hpff~~i~~~ 301 (322)
T d1vzoa_ 285 DADEIKEHLFFQKINWD 301 (322)
T ss_dssp THHHHHTSGGGTTCCHH
T ss_pred cHHHHHcCHhhcCCCHH
Confidence 58999999999987654
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.2e-42 Score=389.17 Aligned_cols=248 Identities=21% Similarity=0.262 Sum_probs=196.5
Q ss_pred EeeeccCCcEEEEEEEEccCC---cEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCCCc
Q 000993 386 LQPLGHGGFGHVVLCKNKLDG---RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 462 (1196)
Q Consensus 386 ~~~LG~G~fG~Vy~a~~~~~g---~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~~~ 462 (1196)
.++||+|+||+||+|++..++ ..||||+++. ........+|.+|+.+|++++|||||+++++|.+.
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~-~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~---------- 100 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS---------- 100 (311)
T ss_dssp EEEEEEETTEEEEEEEECC----CEEEEEEEECC-CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEET----------
T ss_pred ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECc-ccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEec----------
Confidence 478999999999999987543 3689999863 33445567899999999999999999999988542
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 000993 463 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGI 540 (1196)
Q Consensus 463 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qIa~gL~yLHs~gI 540 (1196)
...+++|||||+ ++|.+++... ..+++..++.++.||+.||.|||+.+|
T Consensus 101 -----------------------------~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~i 151 (311)
T d1r0pa_ 101 -----------------------------EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 151 (311)
T ss_dssp -----------------------------TTEEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred -----------------------------CCceEEEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCc
Confidence 346799999997 5888888754 457888999999999999999999999
Q ss_pred cccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcchhHH
Q 000993 541 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 620 (1196)
Q Consensus 541 iHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ksDVwS 620 (1196)
+||||||+||||++++.+||+|||+++......... ........||+.|+|||.+.+ ..++.++||||
T Consensus 152 iHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~-----------~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDI~S 219 (311)
T d1r0pa_ 152 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS-----------VHNKTGAKLPVKWMALESLQT-QKFTTKSDVWS 219 (311)
T ss_dssp CCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCC-----------TTCTTCSSCCGGGSCHHHHHH-CCCCHHHHHHH
T ss_pred ccCCccHHhEeECCCCCEEEecccchhhcccccccc-----------ceecccccccccccChHHHhc-CCCCChhHhhh
Confidence 999999999999999999999999998754322111 112344579999999999987 57999999999
Q ss_pred HHHHHHHhhc---CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHhc
Q 000993 621 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 621 lGviLyELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
||++||||++ ||............+. .+..++.....++++.+||.+||+.||++|||+.+|+++
T Consensus 220 fGivl~El~t~~~p~~~~~~~~~~~~~i~-~g~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~ 287 (311)
T d1r0pa_ 220 FGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 287 (311)
T ss_dssp HHHHHHHHHTTSCCSCC------CHHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHHHHHHHHCCCCCCCCCCHHHHHHHHH-cCCCCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 9999999996 6654443332223222 334444445667899999999999999999999999976
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.3e-42 Score=387.11 Aligned_cols=249 Identities=23% Similarity=0.365 Sum_probs=199.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCC-------cEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeec
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDG-------RHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFET 452 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g-------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~ 452 (1196)
++|++.+.||+|+||.||+|++..++ ..||||+++.. .......++.+|+..+.++ +|||||+++++|.+
T Consensus 13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~- 90 (299)
T d1fgka_ 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ- 90 (299)
T ss_dssp GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcc-cChHHHHHHHHHHHHHHHhcCCCeEEeccccccc-
Confidence 78999999999999999999987554 47999998743 3444567889999999888 89999999999843
Q ss_pred CccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------------CC
Q 000993 453 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DH 515 (1196)
Q Consensus 453 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~ 515 (1196)
...+|+|||||. |+|.+++... ..
T Consensus 91 ---------------------------------------~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~ 131 (299)
T d1fgka_ 91 ---------------------------------------DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 131 (299)
T ss_dssp ---------------------------------------SSSCEEEECCCTTCBHHHHHHTTSCC------------CCC
T ss_pred ---------------------------------------CCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCcccc
Confidence 345799999996 6999999654 34
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcc
Q 000993 516 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 595 (1196)
Q Consensus 516 l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (1196)
+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....... ........
T Consensus 132 l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~ 198 (299)
T d1fgka_ 132 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY-------------YKKTTNGR 198 (299)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCT-------------TCCCTTSC
T ss_pred CCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCCCCeEeccchhhcccccccc-------------ccccccCC
Confidence 89999999999999999999999999999999999999999999999999987643221 11234567
Q ss_pred ccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccc
Q 000993 596 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 671 (1196)
Q Consensus 596 GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~ 671 (1196)
||+.|+|||.+.+ ..|+.++|||||||++|||++ ||......+.. ..+. .+..++.+...++++.+||.+||+
T Consensus 199 ~~~~y~aPE~l~~-~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~-~~i~-~~~~~~~p~~~~~~l~~li~~cl~ 275 (299)
T d1fgka_ 199 LPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF-KLLK-EGHRMDKPSNCTNELYMMMRDCWH 275 (299)
T ss_dssp CGGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH-HHHH-TTCCCCCCSSCCHHHHHHHHHHTC
T ss_pred CChhhhhhhHhcC-CCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHH-HHHH-cCCCCCCCccchHHHHHHHHHHcc
Confidence 9999999999988 679999999999999999985 66555444433 3333 344455556678899999999999
Q ss_pred CCCCCCCCHHHHHhc
Q 000993 672 PSPSDRPSATELLQD 686 (1196)
Q Consensus 672 ~dP~~RPta~eiL~~ 686 (1196)
.||.+|||+.+|++.
T Consensus 276 ~dP~~Rps~~eil~~ 290 (299)
T d1fgka_ 276 AVPSQRPTFKQLVED 290 (299)
T ss_dssp SSGGGSCCHHHHHHH
T ss_pred CCHhHCcCHHHHHHH
Confidence 999999999999973
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-42 Score=390.67 Aligned_cols=249 Identities=24% Similarity=0.296 Sum_probs=203.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhc-CCCCeeeeeeeeeecCc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 454 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~-----~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L-~HpnIV~l~~~~~e~~~ 454 (1196)
++|++.++||+|+||.||+|++. .+++.||||+++... .......+.+|+.+++.+ +|||||+++++|.+
T Consensus 23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~--- 98 (311)
T d1t46a_ 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHMNIVNLLGACTI--- 98 (311)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc-CHHHHHHHHHHHHHHHhccCCCCEEEEEEEEee---
Confidence 79999999999999999999874 456799999997543 344556799999999999 79999999999832
Q ss_pred cccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcC------------------C
Q 000993 455 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD------------------H 515 (1196)
Q Consensus 455 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~------------------~ 515 (1196)
...+|++||||+ |+|.+++.... .
T Consensus 99 -------------------------------------~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 141 (311)
T d1t46a_ 99 -------------------------------------GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 141 (311)
T ss_dssp -------------------------------------SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CC
T ss_pred -------------------------------------CCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccC
Confidence 345799999997 58999886542 5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCcc
Q 000993 516 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 595 (1196)
Q Consensus 516 l~e~~~~~i~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (1196)
+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++...... ........+
T Consensus 142 l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~-------------~~~~~~~~~ 208 (311)
T d1t46a_ 142 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS-------------NYVVKGNAR 208 (311)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCT-------------TSEECSSSE
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccccccCcccccccchheeccCCC-------------cceEeeecc
Confidence 8899999999999999999999999999999999999999999999999998653221 112234568
Q ss_pred ccccCCCchhccCCCCCCCcchhHHHHHHHHHhhc---C-CchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccc
Q 000993 596 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---P-FSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 671 (1196)
Q Consensus 596 GT~~Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---P-f~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~ 671 (1196)
||+.|+|||++.+ ..++.++|||||||++|||+| | |............+. .+..+......++++.+||.+||+
T Consensus 209 gt~~y~aPE~~~~-~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~l~~Li~~cl~ 286 (311)
T d1t46a_ 209 LPVKWMAPESIFN-CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK-EGFRMLSPEHAPAEMYDIMKTCWD 286 (311)
T ss_dssp ECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHH-HTCCCCCCTTSCHHHHHHHHHHTC
T ss_pred cChHHcCHHHhcC-CCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHh-cCCCCCCcccccHHHHHHHHHHcC
Confidence 9999999999987 579999999999999999996 4 444333333333333 333444445567899999999999
Q ss_pred CCCCCCCCHHHHHh
Q 000993 672 PSPSDRPSATELLQ 685 (1196)
Q Consensus 672 ~dP~~RPta~eiL~ 685 (1196)
.||.+|||+.+|++
T Consensus 287 ~dP~~RPs~~~il~ 300 (311)
T d1t46a_ 287 ADPLKRPTFKQIVQ 300 (311)
T ss_dssp SSGGGSCCHHHHHH
T ss_pred CChhHCcCHHHHHH
Confidence 99999999999996
|
| >d1usya_ d.104.1.1 (A:) ATP phosphoribosyltransferase regulatory subunit HisZ {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: ATP phosphoribosyltransferase regulatory subunit HisZ species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.7e-42 Score=384.78 Aligned_cols=261 Identities=17% Similarity=0.191 Sum_probs=202.2
Q ss_pred HHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEeecCCceEeecCCCcHHHHHHHHhCC-CCceeEEEecCeee
Q 000993 757 YVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQ-KSSFKRYEISSVYR 835 (1196)
Q Consensus 757 ~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~~-~~P~r~~Y~G~VfR 835 (1196)
++.. +.+.++++||++|.||+|++... ..... |.|++|+.++||||+|+|+||+++++. ..|.|+||+|+|||
T Consensus 8 k~~s-f~~~~~~~Gy~~i~tP~~E~~e~---~~~~~--F~D~~g~~l~LRpD~T~~iaR~~~~~~~~~p~k~~Y~g~VfR 81 (275)
T d1usya_ 8 KVFS-FYSKATKKGFSPFFVPALEKAEE---PAGNF--FLDRKGNLFSIREDFTKTVLNHRKRYSPDSQIKVWYADFVYR 81 (275)
T ss_dssp HHHH-HHHHHHHTTCEECCCCSEEECSS---CCSSC--EEETTSCEEEECCCHHHHHHHHHTTCTTCCCEEEECCEEEEE
T ss_pred HHHH-HHHHHHHcCCceeecCccccccc---cccce--eEcCCCCEEEECCCCcHHHHHHHHHcCCCCCeeeeEEeeEEE
Confidence 3444 55677899999999999965443 11122 789999999999999999999998754 45999999999999
Q ss_pred cCCCCCCCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCCCCceEEEeCcHHHHHHHHHHcCCCHHHHHHHHHHHHH
Q 000993 836 RAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAM 915 (1196)
Q Consensus 836 ~e~~~~~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi~~~~~i~Lg~~~i~~~~l~~lgl~~~~~~~l~~~l~~ 915 (1196)
+++++ .+||+|+|+|+||.+++.+|+|||.+++++|+.+|+++ ++|+|||+++++.+++.+ +.+.++++..++++
T Consensus 82 ~~~~~--~re~~Q~G~EiiG~~~~~aD~Evi~l~~~~l~~lgi~~-~~i~l~~~~i~~~ll~~l--~~~~~~~l~~~l~~ 156 (275)
T d1usya_ 82 YSGSD--LVAEYQLGLEKVPRNSLDDSLEVLEIIVESASEFFEGP-VIVEIGHTGVYEDLLKEI--PKDLHEKVLNLIDT 156 (275)
T ss_dssp EETTE--EEEEEEEEEEEESCCSHHHHHHHHHHHHHHHHHHCCSC-EEEEEEETTHHHHHHTTS--CGGGHHHHHHHHHT
T ss_pred eCCCc--ccceeecCceeechhhHHHHHHHHHHHHHHHHhhcccc-cEEEecCcchHHHHhhhc--cchHHHHHHHHHHh
Confidence 97664 57899999999999999999999999999999999986 999999999999999965 44556678888887
Q ss_pred hcCCCCCcccccccHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChHHHHHHHHH--HHHHcCC
Q 000993 916 MGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDEL--YLRIWRI 993 (1196)
Q Consensus 916 ~d~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L--~l~~~g~ 993 (1196)
++. .++ +.+....+++...+..+.... .+.+..+ .+. . ........+.+.++ .++..+.
T Consensus 157 k~~------------~~l-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~l~---~-~~~~~~~~~~L~~~~~~l~~~~~ 217 (275)
T d1usya_ 157 KNL------------AEI-EFLSHMKKIDLSRVEKIIEDS-IYRRSPE-HLK---T-MDLPLSVREDLLSASSFLQEKFP 217 (275)
T ss_dssp TCH------------HHH-HHHHHHTCCCCTHHHHHHHHH-HHCCSGG-GGG---T-SCCCHHHHHHHHHHHHHHHHHCS
T ss_pred cch------------hhH-HHHHhhcCCCHHHHHHHhhhh-hhccChh-hhh---h-hHHHHHHHHHHHHHHHHHHhhCC
Confidence 762 122 344445666666666666665 3455432 111 1 22233344445555 6667666
Q ss_pred CceEEEcCCCCCCCCCccceEEEEEecCCCCccccccccccccccccchhhhhccccccccccCCCCCCCcceecccHH
Q 000993 994 EKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALE 1072 (1196)
Q Consensus 994 ~~~i~~Dl~lvrgl~YYTG~vFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaigle 1072 (1196)
..+|.||++++|+++||||+||++|..+.+. +||+|||||.|. .+|||||+++|
T Consensus 218 ~~~i~~D~~~~rgldYYtGivFe~~~~~~~~--------~I~~GGRYD~l~-----------------e~~~G~si~ld 271 (275)
T d1usya_ 218 TVSVEIDLTLARTIEEYCGLIFTIYDTSSSR--------LVAAGGEYTVNG-----------------EKGVGGSIFLE 271 (275)
T ss_dssp SSEEEECCCCGGGGGTCSSEEEEEEETTTTE--------EEEEEEEEEETT-----------------EEEEEEEEEEE
T ss_pred CceEEEcccccCCCcccCCeEEEEEECCCCC--------eEEecccccCCC-----------------CEeeeEEEEee
Confidence 7789999999999999999999999987554 699999999882 16999999976
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-41 Score=386.74 Aligned_cols=249 Identities=21% Similarity=0.288 Sum_probs=205.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCcc
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 455 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~-----~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~ 455 (1196)
++|++.+.||+|+||+||+|.++. +++.||||+++.. ........+.+|+.++++++|||||+++++|..
T Consensus 20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~-~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~---- 94 (308)
T d1p4oa_ 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ---- 94 (308)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT-SCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS----
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcc-cChHHHHHHHHHHHHHHHcCCCCEeeeeeEEec----
Confidence 789999999999999999999863 3578999998743 344455679999999999999999999998832
Q ss_pred ccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhc----------CCCCHHHHHHH
Q 000993 456 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------DHFDKELAWHL 524 (1196)
Q Consensus 456 ~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------~~l~e~~~~~i 524 (1196)
...+++|||||+ |+|.+++... ..+++..+..+
T Consensus 95 ------------------------------------~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i 138 (308)
T d1p4oa_ 95 ------------------------------------GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQM 138 (308)
T ss_dssp ------------------------------------SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHH
T ss_pred ------------------------------------CCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHH
Confidence 345699999996 6999987542 24788999999
Q ss_pred HHHHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCch
Q 000993 525 FRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 604 (1196)
Q Consensus 525 ~~qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 604 (1196)
+.||++||.|||+++|+||||||+|||++.++++||+|||+|+....... .......+||+.|+|||
T Consensus 139 ~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~-------------~~~~~~~~~t~~y~aPe 205 (308)
T d1p4oa_ 139 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY-------------YRKGGKGLLPVRWMSPE 205 (308)
T ss_dssp HHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGC-------------EEGGGSSEECGGGCCHH
T ss_pred HHHHHHHHHHHhhCCeeeceEcCCceeecCCceEEEeecccceeccCCcc-------------eeeccceecccccCCHH
Confidence 99999999999999999999999999999999999999999987643321 12234457999999999
Q ss_pred hccCCCCCCCcchhHHHHHHHHHhhc----CCchhHHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcccCCCCCCCCH
Q 000993 605 IEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA 680 (1196)
Q Consensus 605 ~l~~~~~~s~ksDVwSlGviLyELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta 680 (1196)
.+.+ ..++.++|||||||++|||+| ||......+...... .+..++.....++.+.+||.+||+.||.+|||+
T Consensus 206 ~l~~-~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~--~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~ 282 (308)
T d1p4oa_ 206 SLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM--EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 282 (308)
T ss_dssp HHHH-CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred HHcc-CCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHH--hCCCCCCcccchHHHHHHHHHHcCCChhHCcCH
Confidence 9998 578999999999999999985 666655555544333 334455555677899999999999999999999
Q ss_pred HHHHhc
Q 000993 681 TELLQD 686 (1196)
Q Consensus 681 ~eiL~~ 686 (1196)
.+|+++
T Consensus 283 ~~il~~ 288 (308)
T d1p4oa_ 283 LEIISS 288 (308)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999974
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.3e-40 Score=375.94 Aligned_cols=253 Identities=23% Similarity=0.250 Sum_probs=195.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCeeeeeeeeeecCccccCCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 460 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~~~ 460 (1196)
++|++.+.||+|+||+||+|+++.+|+.||||++...... .++.+|+++++.++|+|+|..+..+..
T Consensus 7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~E~~i~~~l~~~~~i~~~~~~~~--------- 73 (299)
T d1ckia_ 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGA--------- 73 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTS----CCHHHHHHHHHHSTTSTTCCCEEEEEE---------
T ss_pred CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccC----HHHHHHHHHHHHccCCCcccEEEEEEe---------
Confidence 5699999999999999999999999999999998764332 347789999999998887766655532
Q ss_pred CcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 000993 461 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQG 539 (1196)
Q Consensus 461 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qIa~gL~yLHs~g 539 (1196)
.....++|||||+++|.+.+.. ...+++..+..++.||+.||+|||++|
T Consensus 74 ------------------------------~~~~~~ivme~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 123 (299)
T d1ckia_ 74 ------------------------------EGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN 123 (299)
T ss_dssp ------------------------------ETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ------------------------------cCCEEEEEEEEcCCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCC
Confidence 2456799999999988877654 457999999999999999999999999
Q ss_pred CcccCCCcCcEEecC---CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCCCcc
Q 000993 540 IIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 616 (1196)
Q Consensus 540 IiHrDLKp~NILld~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s~ks 616 (1196)
|+||||||+|||++. +..+||+|||+|+.+......... ........+||+.|||||++.+ ..|+.++
T Consensus 124 iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~--------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~ 194 (299)
T d1ckia_ 124 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHI--------PYRENKNLTGTARYASINTHLG-IEQSRRD 194 (299)
T ss_dssp EECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBC--------CCCBCCSCCCCSSSCCHHHHTT-BCCCHHH
T ss_pred eeeccCCHhhccccccCCCceeeeeccCcceeccccccccce--------eccccCCcCCCccccCHHHHhC-CCCCChh
Confidence 999999999999764 457999999999876533211110 1123456689999999999998 5699999
Q ss_pred hhHHHHHHHHHhhc---CCchhHHHHHHHHH---hhh--cCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 617 DMYSLGIVFFELWH---PFSTAMERQIVLSD---LKQ--KGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 617 DVwSlGviLyELlt---Pf~~~~~~~~~~~~---l~~--~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
|||||||++|||++ ||............ ... ....+......++++.+||.+||+.||.+||++.++.+
T Consensus 195 DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~ 271 (299)
T d1ckia_ 195 DLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 271 (299)
T ss_dssp HHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHH
T ss_pred hEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 99999999999997 88654332222111 111 11111123456788999999999999999999987753
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-40 Score=375.53 Aligned_cols=251 Identities=23% Similarity=0.306 Sum_probs=186.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHH--HHHHHHHhcCCCCeeeeeeeeeecCccccC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRIL--REVATLSRLQHQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~--~Ev~iL~~L~HpnIV~l~~~~~e~~~~~~~ 458 (1196)
.+|.+.+.||+|+||.||+|++ +|+.||||+++... ...+. .|+..++.++|||||+++++|.+.+
T Consensus 3 ~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~-----~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~----- 70 (303)
T d1vjya_ 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRHENILGFIAADNKDN----- 70 (303)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-----
T ss_pred cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc-----hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCC-----
Confidence 5788999999999999999987 58999999986422 23333 4555556789999999999986532
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
.....+|+|||||+ |+|.+++++. .+++...+.++.|++.||+|||+
T Consensus 71 -------------------------------~~~~~~~lv~Ey~~~g~L~~~l~~~-~l~~~~~~~~~~~ia~gl~~lH~ 118 (303)
T d1vjya_ 71 -------------------------------GTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHM 118 (303)
T ss_dssp -------------------------------SSSEEEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHC
T ss_pred -------------------------------CcceEEEEEEecccCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 12356899999996 6999999764 69999999999999999999996
Q ss_pred --------CCCcccCCCcCcEEecCCCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCC
Q 000993 538 --------QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 609 (1196)
Q Consensus 538 --------~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 609 (1196)
+||+||||||+||||+.++++||+|||+++........ ........+||+.|||||++.+.
T Consensus 119 ~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~-----------~~~~~~~~~gt~~y~aPE~~~~~ 187 (303)
T d1vjya_ 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT-----------IDIAPNHRVGTKRYMAPEVLDDS 187 (303)
T ss_dssp CBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTE-----------ECC----CCSCGGGCCHHHHTTC
T ss_pred hhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCCCcc-----------eeccccceecccCcCChhhcccc
Confidence 59999999999999999999999999999876432211 11123456899999999998763
Q ss_pred C-----CCCCcchhHHHHHHHHHhhc---CCchh--------------HHHHHHHHHhhhcCCC---CCcccc--CCHHH
Q 000993 610 P-----KIDEKADMYSLGIVFFELWH---PFSTA--------------MERQIVLSDLKQKGEL---PPSWVA--KFSEQ 662 (1196)
Q Consensus 610 ~-----~~s~ksDVwSlGviLyELlt---Pf~~~--------------~~~~~~~~~l~~~~~~---p~~~~~--~~~~l 662 (1196)
. .++.++|||||||+||||+| ||... ................ |..+.. ....+
T Consensus 188 ~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l 267 (303)
T d1vjya_ 188 INMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVM 267 (303)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHH
T ss_pred ccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHH
Confidence 2 25678999999999999996 33110 0111122222222222 222211 12357
Q ss_pred HHHHHHcccCCCCCCCCHHHHHhc
Q 000993 663 ESLLRRLMSPSPSDRPSATELLQD 686 (1196)
Q Consensus 663 ~~LI~~cL~~dP~~RPta~eiL~~ 686 (1196)
.+|+.+||+.||.+|||+.+|+++
T Consensus 268 ~~li~~cl~~dp~~Rps~~ei~~~ 291 (303)
T d1vjya_ 268 AKIMRECWYANGAARLTALRIKKT 291 (303)
T ss_dssp HHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHcccCHhHCcCHHHHHHH
Confidence 899999999999999999999875
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=4.5e-39 Score=362.54 Aligned_cols=252 Identities=18% Similarity=0.219 Sum_probs=196.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCC-CCeeeeeeeeeecCccccCC
Q 000993 381 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH-QHVVRYYQAWFETGVADFDG 459 (1196)
Q Consensus 381 ~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~H-pnIV~l~~~~~e~~~~~~~~ 459 (1196)
++|++.++||+|+||+||+|++..+|+.||||+++..... ..+.+|++.++.++| +||+.+++++.+
T Consensus 5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~e~~~~~~l~~~~~i~~~~~~~~~-------- 72 (293)
T d1csna_ 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA----PQLRDEYRTYKLLAGCTGIPNVYYFGQE-------- 72 (293)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS----CCHHHHHHHHHHTTTCTTCCCEEEEEEE--------
T ss_pred CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCc----HHHHHHHHHHHHhcCCCCCCEEEEEeec--------
Confidence 5799999999999999999999999999999998654322 346788899999965 899999877632
Q ss_pred CCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 000993 460 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 538 (1196)
Q Consensus 460 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qIa~gL~yLHs~ 538 (1196)
....|+|||||+++|.+++...+ .++...+..++.|++.||+|||++
T Consensus 73 --------------------------------~~~~~~vme~~~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~ 120 (293)
T d1csna_ 73 --------------------------------GLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK 120 (293)
T ss_dssp --------------------------------TTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred --------------------------------CCccEEEEEecCCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHC
Confidence 45679999999999999987654 699999999999999999999999
Q ss_pred CCcccCCCcCcEEecC-----CCCeEEeccCcchhccccccccCCCCCCCCCCccccCcCccccccCCCchhccCCCCCC
Q 000993 539 GIIHRDLTPNNIFFDA-----RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 613 (1196)
Q Consensus 539 gIiHrDLKp~NILld~-----~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~s 613 (1196)
||+||||||+|||++. ++.+||+|||+|+........... ......+.+||+.|||||++.+ ..++
T Consensus 121 giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~--------~~~~~~~~~GT~~y~aPE~~~~-~~~~ 191 (293)
T d1csna_ 121 SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHI--------PYREKKNLSGTARYMSINTHLG-REQS 191 (293)
T ss_dssp TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBC--------CCCCCCCCCSCTTTCCHHHHTT-CCCC
T ss_pred CceeccCCccceeecCcccccCCceEEcccceeEEcccCccccce--------eecccCceEEchhhcCHHHhcC-CCCC
Confidence 9999999999999974 567999999999876432211100 0122345689999999999998 5799
Q ss_pred CcchhHHHHHHHHHhhc---CCchhH---HHHHHHHHhh--hcCCCCCccccCCHHHHHHHHHcccCCCCCCCCHHHHHh
Q 000993 614 EKADMYSLGIVFFELWH---PFSTAM---ERQIVLSDLK--QKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 685 (1196)
Q Consensus 614 ~ksDVwSlGviLyELlt---Pf~~~~---~~~~~~~~l~--~~~~~p~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~ 685 (1196)
.++|||||||++|||++ ||.... .......... .....+......++++.+++..|+..+|.+||++..+.+
T Consensus 192 ~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~ 271 (293)
T d1csna_ 192 RRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 271 (293)
T ss_dssp HHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred hHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 99999999999999997 775321 1121111111 111111122345678999999999999999999887753
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=7.9e-37 Score=353.62 Aligned_cols=251 Identities=22% Similarity=0.323 Sum_probs=186.9
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-----------CCCeeeeeeeee
Q 000993 382 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-----------HQHVVRYYQAWF 450 (1196)
Q Consensus 382 ~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-----------HpnIV~l~~~~~ 450 (1196)
+|+++++||+|+||+||+|+++.+|+.||||+++.. ....+.+.+|+.+++.++ |||||++++++.
T Consensus 14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~---~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~ 90 (362)
T d1q8ya_ 14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 90 (362)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecc---ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEee
Confidence 599999999999999999999999999999999732 233467788999998885 467888887763
Q ss_pred ecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecC--CCHHHHH--hhcCCCCHHHHHHHHH
Q 000993 451 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP--RTLRQVF--ESYDHFDKELAWHLFR 526 (1196)
Q Consensus 451 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~--gsL~~~l--~~~~~l~e~~~~~i~~ 526 (1196)
.. .....+++|.++. ++..... .....+++..++.++.
T Consensus 91 ~~--------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 132 (362)
T d1q8ya_ 91 HK--------------------------------------GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISK 132 (362)
T ss_dssp EE--------------------------------------ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHH
T ss_pred ec--------------------------------------cccceeeeeeecccccccccccccccccCCcHHHHHHHHH
Confidence 32 1344566666663 3433333 3445799999999999
Q ss_pred HHHHHHHHHHh-CCCcccCCCcCcEEecCCCC------eEEeccCcchhccccccccCCCCCCCCCCccccCcCcccccc
Q 000993 527 QIVEGLAHIHG-QGIIHRDLTPNNIFFDARND------IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 599 (1196)
Q Consensus 527 qIa~gL~yLHs-~gIiHrDLKp~NILld~~~~------vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 599 (1196)
||+.||+|||+ +||+||||||+||||+.++. +|++|||.|+.... .....+||+.
T Consensus 133 qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~------------------~~~~~~gt~~ 194 (362)
T d1q8ya_ 133 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE------------------HYTNSIQTRE 194 (362)
T ss_dssp HHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTB------------------CCCSCCSCGG
T ss_pred HHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeeccccccccc------------------cccccccccc
Confidence 99999999998 89999999999999987654 99999999875321 1234689999
Q ss_pred CCCchhccCCCCCCCcchhHHHHHHHHHhhc---CCchhHHH------HHHHHHhhhcCCC-------------------
Q 000993 600 YTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMER------QIVLSDLKQKGEL------------------- 651 (1196)
Q Consensus 600 Y~APE~l~~~~~~s~ksDVwSlGviLyELlt---Pf~~~~~~------~~~~~~l~~~~~~------------------- 651 (1196)
|+|||++.+ ..|+.++||||+||++++|++ ||.+.... ..........+..
T Consensus 195 y~aPE~~~~-~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 273 (362)
T d1q8ya_ 195 YRSPEVLLG-APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRG 273 (362)
T ss_dssp GCCHHHHHT-CCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--
T ss_pred ccChhhccc-cCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccch
Confidence 999999987 568999999999999999996 66533211 0111100000000
Q ss_pred -----C---------------CccccCCHHHHHHHHHcccCCCCCCCCHHHHHhccCCCCc
Q 000993 652 -----P---------------PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 692 (1196)
Q Consensus 652 -----p---------------~~~~~~~~~l~~LI~~cL~~dP~~RPta~eiL~~~~~~~~ 692 (1196)
+ ......++++.+||.+||..||.+|||++|+|+||||+..
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~ 334 (362)
T d1q8ya_ 274 LLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT 334 (362)
T ss_dssp CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred hhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCC
Confidence 0 0011223578899999999999999999999999999854
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.84 E-value=1.5e-21 Score=204.43 Aligned_cols=135 Identities=21% Similarity=0.162 Sum_probs=105.0
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC----------------chhHHHHHHHHHHHHhcCCCCeeeee
Q 000993 383 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS----------------LPVNDRILREVATLSRLQHQHVVRYY 446 (1196)
Q Consensus 383 y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~----------------~~~~~~~~~Ev~iL~~L~HpnIV~l~ 446 (1196)
+.+.++||+|+||+||+|++. +|+.||||+++....+ ........+|+..+.++.|++++..+
T Consensus 2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~ 80 (191)
T d1zara2 2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVY 80 (191)
T ss_dssp SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEE
T ss_pred chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEE
Confidence 357899999999999999986 7999999987642111 01123455789999999999998877
Q ss_pred eeeeecCccccCCCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCCCHHHHHhhcCCCCHHHHHHHHH
Q 000993 447 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFR 526 (1196)
Q Consensus 447 ~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~ 526 (1196)
++. ..+++|||+++... ..++...+..++.
T Consensus 81 ~~~--------------------------------------------~~~lvme~~~~~~~------~~l~~~~~~~i~~ 110 (191)
T d1zara2 81 AWE--------------------------------------------GNAVLMELIDAKEL------YRVRVENPDEVLD 110 (191)
T ss_dssp EEE--------------------------------------------TTEEEEECCCCEEG------GGCCCSCHHHHHH
T ss_pred Eec--------------------------------------------CCEEEEEeeccccc------cchhhHHHHHHHH
Confidence 442 01689999987321 1245566778999
Q ss_pred HHHHHHHHHHhCCCcccCCCcCcEEecCCCCeEEeccCcchhc
Q 000993 527 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 569 (1196)
Q Consensus 527 qIa~gL~yLHs~gIiHrDLKp~NILld~~~~vKL~DFGlA~~~ 569 (1196)
||+.+|+|||++||+||||||+|||++.+ .++|+|||+|...
T Consensus 111 ql~~~l~~lH~~giiHrDiKP~NILv~~~-~~~liDFG~a~~~ 152 (191)
T d1zara2 111 MILEEVAKFYHRGIVHGDLSQYNVLVSEE-GIWIIDFPQSVEV 152 (191)
T ss_dssp HHHHHHHHHHHTTEECSCCSTTSEEEETT-EEEECCCTTCEET
T ss_pred HHHHHHHHHhhCCEEEccCChhheeeeCC-CEEEEECCCcccC
Confidence 99999999999999999999999999865 5899999999754
|
| >d1kmma1 c.51.1.1 (A:326-424) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Anticodon-binding domain-like superfamily: Class II aaRS ABD-related family: Anticodon-binding domain of Class II aaRS domain: Histidyl-tRNA synthetase (HisRS), C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.53 E-value=1e-14 Score=135.25 Aligned_cols=95 Identities=17% Similarity=0.263 Sum_probs=89.2
Q ss_pred CCceEEEEEcCCCchHHHHHHHHHHHHHc--CCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCC
Q 000993 1089 AGTSVLVCSRGGGGLLVERMELVAELWEE--NIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDV 1166 (1196)
Q Consensus 1089 ~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~--Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~ 1166 (1196)
+.+||+|++.+ ++...+|+.++++||++ |++|++++. ++++++++++|++.|+||++++|++|.++|+|+||||.+
T Consensus 2 p~vdv~vi~~~-~~~~~~a~~la~~LR~~~~gi~v~~~~~-~~~l~kq~k~A~~~~~~~~iiiG~~E~~~~~v~vk~l~~ 79 (99)
T d1kmma1 2 PVVDIYLVASG-ADTQSAAMALAERLRDELPGVKLMTNHG-GGNFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRS 79 (99)
T ss_dssp CSCSEEEECCS-TTHHHHHHHHHHHHHHHSTTCCEEECCS-CCCHHHHHHHHHHHTCSEEEECCHHHHHTTEEEEEETTT
T ss_pred CCCEEEEEECC-HHHHHHHHHHHHHHHhcCCCeEEEEeCC-CCCHHHHHHHHHHhCCChhhhcCchhhhccEEEEEECCC
Confidence 36789999996 78899999999999998 999998887 679999999999999999999999999999999999999
Q ss_pred CcccccchHHHHHHHHHHH
Q 000993 1167 KKEKEVQRESLVRFLLDAI 1185 (1196)
Q Consensus 1167 g~q~~v~~~el~~~l~~~l 1185 (1196)
|+|..+++++++++|++.|
T Consensus 80 ~~q~~v~~~el~~~l~~~L 98 (99)
T d1kmma1 80 GEQTAVAQDSVAAHLRTLL 98 (99)
T ss_dssp CCEEEEEHHHHHHHHHHHH
T ss_pred CCEEEEeHHHHHHHHHHHh
Confidence 9999999999999999875
|
| >d1wu7a1 c.51.1.1 (A:330-426) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Anticodon-binding domain-like superfamily: Class II aaRS ABD-related family: Anticodon-binding domain of Class II aaRS domain: Histidyl-tRNA synthetase (HisRS), C-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.50 E-value=2.9e-14 Score=131.68 Aligned_cols=93 Identities=23% Similarity=0.328 Sum_probs=87.3
Q ss_pred CceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcc
Q 000993 1090 GTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKE 1169 (1196)
Q Consensus 1090 ~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q 1169 (1196)
..+|+||+.+ +....+|+++++.||+.|++|++++. ++++++++++|++.|+||+|++|++|+++|+|+||||.+|+|
T Consensus 3 ~~~V~i~~~g-~~~~~~~~~l~~~Lr~~gi~v~~d~~-~~~l~kq~~~A~~~~~~~~iiiG~~E~~~~~v~ik~l~~~~q 80 (97)
T d1wu7a1 3 KKSVYICRVG-KINSSIMNEYSRKLRERGMNVTVEIM-ERGLSAQLKYASAIGADFAVIFGERDLERGVVTIRNMYTGSQ 80 (97)
T ss_dssp SCEEEEEEES-SCCHHHHHHHHHHHHTTTCEEEECCS-CCCHHHHHHHHHHTTCSEEEEEEHHHHHTTEEEEEETTTCCE
T ss_pred CceEEEEEeC-HHHHHHHHHHHHHHHHCCCEEEEECC-CCcHHHHHHHHHhcCCCeEEecCCccccCCceEEEECCCCCE
Confidence 4589999997 77889999999999999999998887 679999999999999999999999999999999999999999
Q ss_pred cccchHHHHHHHHHH
Q 000993 1170 KEVQRESLVRFLLDA 1184 (1196)
Q Consensus 1170 ~~v~~~el~~~l~~~ 1184 (1196)
..+++++++++|...
T Consensus 81 ~~v~~~~l~~~l~~~ 95 (97)
T d1wu7a1 81 ENVGLDSVVEHLISQ 95 (97)
T ss_dssp EEEEGGGHHHHHHHC
T ss_pred EEEeHHHHHHHHHhc
Confidence 999999999998754
|
| >d1qf6a1 c.51.1.1 (A:533-642) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Anticodon-binding domain-like superfamily: Class II aaRS ABD-related family: Anticodon-binding domain of Class II aaRS domain: Threonyl-tRNA synthetase (ThrRS), C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.48 E-value=1.1e-13 Score=130.82 Aligned_cols=101 Identities=15% Similarity=0.095 Sum_probs=93.4
Q ss_pred CCCceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCC
Q 000993 1088 EAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVK 1167 (1196)
Q Consensus 1088 ~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g 1167 (1196)
.+|.+|+|++.+ ++...+|.++++.||+.|++|++++. +.++++++++|+..|+||+|++|++|+++|+|+||+|+++
T Consensus 5 laP~Qv~iipi~-~~~~~~a~~i~~~Lr~~gi~v~~d~~-~~~l~~ki~~a~~~g~p~~iiiG~~E~~~~~V~ir~~~~~ 82 (110)
T d1qf6a1 5 LAPVQVVIMNIT-DSQSEYVNELTQKLSNAGIRVKADLR-NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGK 82 (110)
T ss_dssp TCSSCEEEEESS-HHHHHHHHHHHHHHHTTTCCEEEECC-SSCHHHHHHHHHHTTCSEEEEECTTTGGGCCEEEEESSSC
T ss_pred cCCceEEEEecc-HHHHHHHHHHHHHHHHhhccccccCC-ccchhHHHHHHHHcCCCEEEEECchHHhCCEEEEEECCCC
Confidence 468899999996 67788999999999999999998877 6799999999999999999999999999999999999999
Q ss_pred cccccchHHHHHHHHHHHHhhcc
Q 000993 1168 KEKEVQRESLVRFLLDAIASQFR 1190 (1196)
Q Consensus 1168 ~q~~v~~~el~~~l~~~l~~~~~ 1190 (1196)
+|..++++++++.|++.+++...
T Consensus 83 ~q~~i~~~e~i~~l~~~i~~r~~ 105 (110)
T d1qf6a1 83 DLGSMDVNEVIEKLQQEIRSRSL 105 (110)
T ss_dssp EEEEECHHHHHHHHHHHHHTTCS
T ss_pred ceEEeeHHHHHHHHHHHHHHHHH
Confidence 99999999999999999886543
|
| >d1h4vb1 c.51.1.1 (B:326-421) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Anticodon-binding domain-like superfamily: Class II aaRS ABD-related family: Anticodon-binding domain of Class II aaRS domain: Histidyl-tRNA synthetase (HisRS), C-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=99.48 E-value=2.6e-14 Score=131.79 Aligned_cols=93 Identities=17% Similarity=0.257 Sum_probs=86.7
Q ss_pred CceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCcc
Q 000993 1090 GTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKE 1169 (1196)
Q Consensus 1090 ~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~q 1169 (1196)
.+||+|++.+ ++...+|+++++.||+ |++|++++. ++++++++++|++.|+||+||+|++|+++|+|+||||.+|+|
T Consensus 3 ~pdv~iv~~~-~~~~~~a~~i~~~LR~-~~~~~~~~~-~~~l~kq~k~A~~~~~~~~iiiG~~E~~~~~v~vK~l~~~~q 79 (96)
T d1h4vb1 3 GPDLYLIPLT-EEAVAEAFYLAEALRP-RLRAEYALA-PRKPAKGLEEALKRGAAFAGFLGEDELRAGEVTLKRLATGEQ 79 (96)
T ss_dssp CCSEEEEESS-HHHHHHHHHHHHHHTT-TSCEEECSS-CCCHHHHHHHHHHTTCSEEEEECHHHHHHTEEEEEETTTCCE
T ss_pred CCEEEEEEcC-HHHHHHHHHHHHHHHc-CceEEEECC-CCCHHHHHHHHHHcCCCEEEEecchhHhcCcEEEEECCCCcE
Confidence 4689999996 7889999999999985 999998877 679999999999999999999999999999999999999999
Q ss_pred cccchHHHHHHHHHHH
Q 000993 1170 KEVQRESLVRFLLDAI 1185 (1196)
Q Consensus 1170 ~~v~~~el~~~l~~~l 1185 (1196)
..+++++++++|++.+
T Consensus 80 ~~v~~~el~~~l~~~l 95 (96)
T d1h4vb1 80 VRLSREEVPGYLLQAL 95 (96)
T ss_dssp EEEEGGGHHHHHHHHC
T ss_pred EEEEHHHHHHHHHHhh
Confidence 9999999999998764
|
| >d1qe0a1 c.51.1.1 (A:326-420) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Anticodon-binding domain-like superfamily: Class II aaRS ABD-related family: Anticodon-binding domain of Class II aaRS domain: Histidyl-tRNA synthetase (HisRS), C-terminal domain species: Staphylococcus aureus [TaxId: 1280]
Probab=99.47 E-value=3.1e-14 Score=131.01 Aligned_cols=93 Identities=14% Similarity=0.251 Sum_probs=87.0
Q ss_pred CCceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCCc
Q 000993 1089 AGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKK 1168 (1196)
Q Consensus 1089 ~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g~ 1168 (1196)
...||+|++.+ ++...+|+++++.||+.|++|++++. ..++++++++|++.|+||++++|++|+++|+|+||+|.+++
T Consensus 3 ~~~dv~ii~~~-~~~~~~a~~i~~~Lr~~gi~v~~d~~-~~~l~kq~~~A~~~~~~~~iiiG~~E~~~~~v~vk~l~~~~ 80 (95)
T d1qe0a1 3 ENLDLFIVTMG-DQADRYAVKLLNHLRHNGIKADKDYL-QRKIKGQMKQADRLGAKFTIVIGDQELENNKIDVKNMTTGE 80 (95)
T ss_dssp CCCSEEEEECH-HHHHHHHHHHHHHHHTTTCCEEECCS-CCCHHHHHHHHHHTTCSEEEEECHHHHHHTCEEEEETTTCC
T ss_pred CCCeEEEEEeC-HHHHHHHHHHHHHHHHCCCcEEecCC-CCCHHHHHHHHHhcCCCEEEEEccchhhCCEEEEEECCCCC
Confidence 45789999996 77899999999999999999998877 67999999999999999999999999999999999999999
Q ss_pred ccccchHHHHHHHHH
Q 000993 1169 EKEVQRESLVRFLLD 1183 (1196)
Q Consensus 1169 q~~v~~~el~~~l~~ 1183 (1196)
|..+++++++++|++
T Consensus 81 q~~i~~~el~~~l~k 95 (95)
T d1qe0a1 81 SETIELDALVEYFKK 95 (95)
T ss_dssp EEEECTTHHHHHHHC
T ss_pred EEEEeHHHHHHHhcC
Confidence 999999999998863
|
| >d1nyra1 c.51.1.1 (A:533-645) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Anticodon-binding domain-like superfamily: Class II aaRS ABD-related family: Anticodon-binding domain of Class II aaRS domain: Threonyl-tRNA synthetase (ThrRS), C-terminal domain species: Staphylococcus aureus [TaxId: 1280]
Probab=99.43 E-value=1.5e-13 Score=130.41 Aligned_cols=100 Identities=15% Similarity=0.159 Sum_probs=91.0
Q ss_pred CCCCceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCC
Q 000993 1087 NEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDV 1166 (1196)
Q Consensus 1087 ~~~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~ 1166 (1196)
..+|.+|.|++.+.+....+|.++++.||+.|++|++++. +.++++++++|+..|+||+|+||++|+++|+|+||++.+
T Consensus 10 ~lAP~qv~iipi~~~~~~~~a~~l~~~Lr~~gi~v~~D~~-~~~~g~k~~~a~~~g~p~~iiiG~~E~~~~~v~vr~~~~ 88 (113)
T d1nyra1 10 WLAPKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDDR-NEKMGYKIREAQMQKIPYQIVVGDKEVENNQVNVRQYGS 88 (113)
T ss_dssp TTCSSCEEEEESSHHHHHHHHHHHHHHHHTTTCCEEECCS-SCCHHHHHHHHHHHTCSEEEEECHHHHHTTEEEEEETTS
T ss_pred ccCCceEEEEEeCcHHHhhhHHHHHHHhhhhccceeeccc-ccccchHHHHHHHhCceEEEEEccccccCCEEEEEECCC
Confidence 3578899999986344567899999999999999998877 678999999999999999999999999999999999999
Q ss_pred CcccccchHHHHHHHHHHHHh
Q 000993 1167 KKEKEVQRESLVRFLLDAIAS 1187 (1196)
Q Consensus 1167 g~q~~v~~~el~~~l~~~l~~ 1187 (1196)
++|..++++++++.|.+.++.
T Consensus 89 ~~q~~v~~~e~i~~l~~ei~~ 109 (113)
T d1nyra1 89 QDQETVEKDEFIWNLVDEIRL 109 (113)
T ss_dssp SCCCEEEHHHHHHHHHHHHHT
T ss_pred CcEEEEeHHHHHHHHHHHHHH
Confidence 999999999999999988864
|
| >d2daya1 d.20.1.3 (A:8-122) E3 ubiquitin-protein ligase RNF25 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: RWD domain domain: E3 ubiquitin-protein ligase RNF25 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.36 E-value=4e-13 Score=127.92 Aligned_cols=82 Identities=21% Similarity=0.389 Sum_probs=73.5
Q ss_pred CcceEeecCCCCCCC--CccceeEEEEEeCCCCCCCCCceeeccCCCCCHHHHHHHHHHHHHHHHHhhhCCCeEEEeeHH
Q 000993 16 GRAQSKDHSSSTVDD--NELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVE 93 (1196)
Q Consensus 16 ~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~Gm~miftl~~ 93 (1196)
...++|.+....+++ ...+.+.|+|+||++||+++|.+.+...+|+++.++..|.+.|.+++++|+ ||+|||+||+
T Consensus 32 ~~~~~i~~~~~~~~~~~~~~~~v~L~~~~p~~YP~~~P~i~~~~~~~l~~~~~~~L~~~l~~~~~e~~--G~~mif~lv~ 109 (115)
T d2daya1 32 PWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNPRGLSDEQIHTILQVLGHVAKAGL--GTAMLYELIE 109 (115)
T ss_dssp CEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEEESSCHHHHHHHHHHHHHHHHHTT--TSCCHHHHHH
T ss_pred CeEEEEEEecCCCCCCcccceEEEEEEEcCCCCCCCCCcEEeeccCCCCHHHHHHHHHHHHHHHHHcC--CCEEHHHHHH
Confidence 346777777655432 336899999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHH
Q 000993 94 AAQEFL 99 (1196)
Q Consensus 94 ~~~e~l 99 (1196)
++||||
T Consensus 110 ~~qE~L 115 (115)
T d2daya1 110 KGKEIL 115 (115)
T ss_dssp HHHHHH
T ss_pred HHHhhC
Confidence 999997
|
| >d1ukxa_ d.20.1.3 (A:) EIF2-alpha kinase 4 (GCN2-like protein) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: RWD domain domain: EIF2-alpha kinase 4 (GCN2-like protein) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.24 E-value=4.9e-12 Score=124.09 Aligned_cols=91 Identities=27% Similarity=0.436 Sum_probs=79.5
Q ss_pred CCCCcCCcceEeecCCCCCCC-CccceeEEEEEeCCCCCCCCCceeeccCCCCCHHHHHHHHHHHHHHHHHhhhCCCeEE
Q 000993 10 SGRRSKGRAQSKDHSSSTVDD-NELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMI 88 (1196)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~Gm~mi 88 (1196)
.+....+.+++|.+....+++ ...+.+.|.|+||++||+++|.+.+...++|++..+..|.+.|++.+++|+ ||+||
T Consensus 38 ~~~~~~~~~~~i~i~~~~~~~~~~~~~i~L~~~lp~~YP~~~P~i~~~~~~~l~~~~~~~L~~~l~~~~~e~~--G~~mi 115 (137)
T d1ukxa_ 38 RGRVREPPEINLVLYPQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKNAKGLSNESVNLLKSHLEELAKKQC--GEVMI 115 (137)
T ss_dssp SSSCCCCCCEEEEECCTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEEEESSSSSHHHHHHHHHHHHHHHHT--TSCCH
T ss_pred cccccCCCeEEEEEeccCCCCccceEEEEEEEECCCCCCcccceEEEecCCCCCHHHHHHHHHHHHHHHHHcC--CCEeH
Confidence 344445567888877765543 336889999999999999999999999999999999999999999999999 99999
Q ss_pred EeeHHHHHHHHHhh
Q 000993 89 FNLVEAAQEFLSEI 102 (1196)
Q Consensus 89 ftl~~~~~e~l~~~ 102 (1196)
|+||+.+||||++.
T Consensus 116 f~lv~~lqe~L~e~ 129 (137)
T d1ukxa_ 116 FELAHHVQSFLSEH 129 (137)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999876
|
| >d1nj1a1 c.51.1.1 (A:284-410) Prolyl-tRNA synthetase (ProRS) domain {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Anticodon-binding domain-like superfamily: Class II aaRS ABD-related family: Anticodon-binding domain of Class II aaRS domain: Prolyl-tRNA synthetase (ProRS) domain species: Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]
Probab=99.23 E-value=5.5e-12 Score=122.01 Aligned_cols=104 Identities=12% Similarity=0.078 Sum_probs=91.6
Q ss_pred CCCCCceEEEEEcCC----CchHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEE
Q 000993 1086 RNEAGTSVLVCSRGG----GGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKV 1161 (1196)
Q Consensus 1086 ~~~~~~~vlv~~~~~----~~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~v 1161 (1196)
..-+|.+|.|++... ++...+|.++++.|++.|++|++++. +.++++++++|+..|+|++|++|++|+++|+|+|
T Consensus 7 ~~iAP~qV~Iipi~~~~~~e~~~~~a~~l~~~L~~~gi~v~~D~r-~~~~g~K~~~a~~~giP~~iiiG~ke~~~~~v~l 85 (127)
T d1nj1a1 7 PDVAAHQVVIVPIIFKKAAEEVMEACRELRSRLEAAGFRVHLDDR-DIRAGRKYYEWEMRGVPLRVEIGPRDLEKGAAVI 85 (127)
T ss_dssp TTTSSCSEEEEECCSSSSHHHHHHHHHHHHHHHHTTTCCEEECCC-SSCHHHHHHHHHHEECSEEEEECHHHHTTTEEEE
T ss_pred cccCCceEEEEEccCCCchHHHHHHHHHHHHHHHhcCCceEEEec-cchHHHHHHHHHhhcCchheeecccccccCEEEE
Confidence 345788999998742 23567899999999999999998877 6799999999999999999999999999999999
Q ss_pred EEcCCCcccccchHHHHHHHHHHHHhhcc
Q 000993 1162 RHLDVKKEKEVQRESLVRFLLDAIASQFR 1190 (1196)
Q Consensus 1162 k~l~~g~q~~v~~~el~~~l~~~l~~~~~ 1190 (1196)
|++++|++..++++++++++++.+.....
T Consensus 86 ~~r~~~~~~~v~~~~~~~~i~~ll~~i~~ 114 (127)
T d1nj1a1 86 SRRDTGEKVTADLQGIEETLRELMKDILE 114 (127)
T ss_dssp EESSSCCEEEEETTTHHHHHHHHHHHHHH
T ss_pred EEcCCCcEEEeeHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999887776543
|
| >d1qf6a4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Threonyl-tRNA synthetase (ThrRS) species: Escherichia coli [TaxId: 562]
Probab=99.22 E-value=1.3e-11 Score=135.99 Aligned_cols=152 Identities=9% Similarity=0.080 Sum_probs=123.6
Q ss_pred cccCCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce------eecCCCcccccceEEEeecCCceEeecCCC
Q 000993 736 RLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHEL 809 (1196)
Q Consensus 736 ~~~~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~laLRPD~ 809 (1196)
.+++...|+..|+|..+++++.|++.+++.+.+.||++|.||.+ .-+++.+...++||.+.+. ++.++|||--
T Consensus 14 ~~~~~~~G~~~~lP~G~~l~~~L~~~i~e~~~~~G~~eV~~P~L~~~~l~~~sG~~~~~~~~~~~~~~~-~~~~~L~Pt~ 92 (291)
T d1qf6a4 14 HMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSE-NREYCIKPMN 92 (291)
T ss_dssp ECCTTSTTCCEECHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEETHHHHHHSHHHHHGGGCEEEEET-TEEEEECSSS
T ss_pred cccCCCCcceEEccCHHHHHHHHHHHHHHHHHHcCCEEEEcccccchhHHhhhchhhhccchhcccccc-chhhcccccC
Confidence 34566899999999999999999999999999999999999999 2233456678899987654 6899999966
Q ss_pred cHHHHHHHHh----CCCCceeEEEecCeeecCC-CC----CCCcceeEeEEEEeCCCCccchH--HHHHHHHHHHHHcCC
Q 000993 810 RLPFIRWAIS----NQKSSFKRYEISSVYRRAI-GH----SPPNRYLQGDFDIIGGASALTEA--EVLKVTMDIVTRFFH 878 (1196)
Q Consensus 810 T~~iaR~~a~----~~~~P~r~~Y~G~VfR~e~-~~----~~~~ef~Q~GvEiiG~~~~~aDa--EvI~la~~~L~~lgi 878 (1196)
.++++.++.. ++..|+|+|+++++||+|. +. .|.++|+|.++.+|+.+...++. +++.++.++++.+|+
T Consensus 93 e~~~~~~~~~~~~sy~~LPl~~~q~~~~fR~E~~~~~~Gl~R~reF~~~d~h~f~~~e~~~~e~~~~~~~~~~i~~~lGl 172 (291)
T d1qf6a4 93 CPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGF 172 (291)
T ss_dssp HHHHHHHHTTSCEEGGGCSEEEEEEEEEECCCCGGGCBTTTBCSEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHGGGTC
T ss_pred cHHHHHHHHccccchhhcCeeEeecceeeecccccccccccccccceeccceeEecchhhHHHHHHHHHHHHHHHHHcCC
Confidence 6677777755 3356999999999999984 32 25567999999999987654332 788999999999999
Q ss_pred CCceEEEeCcH
Q 000993 879 AESCDIHLNHG 889 (1196)
Q Consensus 879 ~~~~~i~Lg~~ 889 (1196)
+. +.+.++.+
T Consensus 173 ~~-~~v~~s~~ 182 (291)
T d1qf6a4 173 EK-IVVKLSTR 182 (291)
T ss_dssp CC-CEEEEECC
T ss_pred ce-EEEEEecC
Confidence 85 88887753
|
| >d1nj8a3 d.104.1.1 (A:0-267) Prolyl-tRNA synthetase (ProRS) {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Prolyl-tRNA synthetase (ProRS) species: Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]
Probab=99.20 E-value=5e-11 Score=130.08 Aligned_cols=141 Identities=11% Similarity=0.094 Sum_probs=108.0
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----ee--cC-CCcccccceEEEeec----CCceEeecC
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LG-DCPQFKRNTVKLLTH----GGDLLELSH 807 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~-~~~~~~~~my~f~D~----~G~~laLRP 807 (1196)
...+|+..|+|...++++.|++.+++.+.++||++|.||.+ ++ ++ +.....++||.+.+. .++.++|||
T Consensus 22 ~~v~G~~~~lP~G~~i~~~i~~~i~~~~~~~G~~ev~~P~l~~~~l~~ks~~~~~~~~~~~~~~~~~~~~~~~~~~~L~P 101 (268)
T d1nj8a3 22 YPIKGCGVYLPYGFKIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKEAEHIKGFEDEVYWVTHGGKTQLDVKLALRP 101 (268)
T ss_dssp STTSSCCBBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHHHHCSSSGGGGGGCEEEEESSSSEEEEEEEECS
T ss_pred CCCCccEEECccHHHHHHHHHHHHHHHHHHcCCeEEeehhhhhhHhhhccCCCccccccceeEEeccccccchhhhhccc
Confidence 34479999999999999999999999999999999999998 22 22 245567888887643 356799999
Q ss_pred CCcHHHHHHHHh----CCCCceeEEEecCeeecCCCC----CCCccee-EeEEEEeCCCCccchH---HHHHHHHHHHHH
Q 000993 808 ELRLPFIRWAIS----NQKSSFKRYEISSVYRRAIGH----SPPNRYL-QGDFDIIGGASALTEA---EVLKVTMDIVTR 875 (1196)
Q Consensus 808 D~T~~iaR~~a~----~~~~P~r~~Y~G~VfR~e~~~----~~~~ef~-Q~GvEiiG~~~~~aDa---EvI~la~~~L~~ 875 (1196)
..+++++++++. ++.+|+|+|++|+|||+|... -|++||+ |-++.++......++. +++....++++.
T Consensus 102 ~~~~~~~~i~~~~~~Syr~LP~r~~e~~~~fR~E~~~~~GllR~reF~~~dd~~~~~~~~~~~~~~~~~~~~~y~~if~~ 181 (268)
T d1nj8a3 102 TSETPIYYMMKLWVKVHTDLPIKIYQIVNTFRYETKHTRPLIRLREIMTFKEAHTAHSTKEEAENQVKEAISIYKKFFDT 181 (268)
T ss_dssp SSHHHHHHHHHTTCCBTTSCCCCEEEEECCBCCCCSCCBTTTBCSBCSCEEEEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCchhHHhhhhhccchhhhheEEeeccccccccccccccceeEEEEeeechhceeccccchhhHHHHHHHHHHHHHHHh
Confidence 999999998876 335699999999999998533 2556787 4556777655444443 345556677888
Q ss_pred cCCC
Q 000993 876 FFHA 879 (1196)
Q Consensus 876 lgi~ 879 (1196)
+|+.
T Consensus 182 l~l~ 185 (268)
T d1nj8a3 182 LGIP 185 (268)
T ss_dssp HTCC
T ss_pred cCcc
Confidence 8886
|
| >d1nyra4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Threonyl-tRNA synthetase (ThrRS) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.18 E-value=1.8e-11 Score=134.77 Aligned_cols=148 Identities=9% Similarity=0.059 Sum_probs=120.2
Q ss_pred CCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce------eecCCCcccccceEEEeec-CCceEeecCCCcHH
Q 000993 740 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTH-GGDLLELSHELRLP 812 (1196)
Q Consensus 740 ~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~-~G~~laLRPD~T~~ 812 (1196)
...|+..|+|..+.+++.|++.+++.+.++||++|.||.+ .-+++.+...++||++.+. +++.++|||--.++
T Consensus 18 ~g~G~~~~~p~G~~l~~~L~~~~~~~~~~~G~~eV~~P~l~~~~l~~~sG~~~~~~~~~~~~~~~~~~~~~~L~pt~e~~ 97 (291)
T d1nyra4 18 VGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPMNCPH 97 (291)
T ss_dssp TEEEEEEECHHHHHHHHHHHHHHHHHHHHTTEEECBCCSEEETHHHHHHTHHHHCTTSSCCCEEETTTEEEEECSSSHHH
T ss_pred ccCcceEEehhHHHHHHHHHHHHHHHHHHcCCEEEECccccchhHhhhhccccccccceEEEeeccccccccccccchhH
Confidence 4689999999999999999999999999999999999999 2233466778999987654 58899999966666
Q ss_pred HHHHHHhC----CCCceeEEEecCeeecCCCC-----CCCcceeEeEEEEeCCCCccch--HHHHHHHHHHHHHcCCCCc
Q 000993 813 FIRWAISN----QKSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAES 881 (1196)
Q Consensus 813 iaR~~a~~----~~~P~r~~Y~G~VfR~e~~~-----~~~~ef~Q~GvEiiG~~~~~aD--aEvI~la~~~L~~lgi~~~ 881 (1196)
++.++... +..|+|+|.++++||+|... .|.++|+|.++.+|+.++...+ .+++.++.++++.||+..
T Consensus 98 ~~~~~~~~~~sy~dLPlr~~~~~~~fR~E~~~~~~Gl~Rvr~F~~~d~~~f~~~eq~~~e~~~~~~~~~~i~~~lGl~~- 176 (291)
T d1nyra4 98 HMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFED- 176 (291)
T ss_dssp HHHHHHTSCCBGGGCCEEEEEEEEEECCCCTTTCBTTTBCSEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHTTCCC-
T ss_pred HHHhhhcEeccccccceEEeeccceeecCCCcccccccceeeeeeeeheeecCCcccHHHHHHHHHHHHHHhhhcCcCc-
Confidence 66666542 34699999999999998753 2455699999999997665333 378999999999999985
Q ss_pred eEEEeCc
Q 000993 882 CDIHLNH 888 (1196)
Q Consensus 882 ~~i~Lg~ 888 (1196)
+.+.++.
T Consensus 177 ~~v~~~~ 183 (291)
T d1nyra4 177 YSFRLSY 183 (291)
T ss_dssp EEEEEEE
T ss_pred eEEEEec
Confidence 7777655
|
| >d1g5ha1 c.51.1.1 (A:343-469) The aaRS-like accessory subunit of mitochondrial polymerase gamma, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Anticodon-binding domain-like superfamily: Class II aaRS ABD-related family: Anticodon-binding domain of Class II aaRS domain: The aaRS-like accessory subunit of mitochondrial polymerase gamma, C-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.17 E-value=2.5e-11 Score=117.28 Aligned_cols=103 Identities=23% Similarity=0.189 Sum_probs=89.1
Q ss_pred CCCCceEEEEEcCCC--chHHHHHHHHHHHHHcCCeEEEee--CCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEE
Q 000993 1087 NEAGTSVLVCSRGGG--GLLVERMELVAELWEENIKAQFVP--VPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVR 1162 (1196)
Q Consensus 1087 ~~~~~~vlv~~~~~~--~~~~~a~~~a~~Lr~~Gi~vel~~--~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk 1162 (1196)
.-+|.+|.|++.... +....|.++++.|++.|++|.... ..+.++++++++|++.|+||+|++|++|+++|+|+||
T Consensus 9 ~lAP~qV~Ii~~~~~~~e~~~~a~~l~~~L~~~gi~v~~~~~D~~~~~lg~k~~~a~~~giP~~iiiG~~e~~~~~V~ir 88 (127)
T d1g5ha1 9 CLAPIKVALDVGKGPTVELRQVCQGLLNELLENGISVWPGYSETVHSSLEQLHSKYDEMSVLFSVLVTETTLENGLIQLR 88 (127)
T ss_dssp TTCSCCEEEEECSSCHHHHHHHHHHHHHHHHHTTCCEEEGGGSCCCSCHHHHHHHHHHTTCSEEEEECHHHHHHCEEEEE
T ss_pred ccCCceEEEEecCCCCHHHHHHHHHHHHHHHHhcCceeeeeecCCCcCHHHHHHHHHHhCCcEEEEEcCCccccCEEEEE
Confidence 456888999887422 345668899999999999998643 2246899999999999999999999999999999999
Q ss_pred EcCCCcccccchHHHHHHHHHHHHhhc
Q 000993 1163 HLDVKKEKEVQRESLVRFLLDAIASQF 1189 (1196)
Q Consensus 1163 ~l~~g~q~~v~~~el~~~l~~~l~~~~ 1189 (1196)
++++|+|..++++++.++|.+.+.+..
T Consensus 89 ~r~t~~q~~i~i~~l~~~l~~~l~~~~ 115 (127)
T d1g5ha1 89 SRDTTMKEMMHISKLRDFLVKYLASAS 115 (127)
T ss_dssp ETTTCCEEEEETTSHHHHHHHHHHHHH
T ss_pred ECCCCceEEEEHHHHHHHHHHHHHccc
Confidence 999999999999999999999988754
|
| >d1nj8a1 c.51.1.1 (A:268-393) Prolyl-tRNA synthetase (ProRS) domain {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Anticodon-binding domain-like superfamily: Class II aaRS ABD-related family: Anticodon-binding domain of Class II aaRS domain: Prolyl-tRNA synthetase (ProRS) domain species: Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]
Probab=99.09 E-value=1.1e-10 Score=112.63 Aligned_cols=103 Identities=8% Similarity=0.035 Sum_probs=88.4
Q ss_pred CCCCCceEEEEEcCCC----chHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEE
Q 000993 1086 RNEAGTSVLVCSRGGG----GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKV 1161 (1196)
Q Consensus 1086 ~~~~~~~vlv~~~~~~----~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~v 1161 (1196)
...+|.+|.|++.... ....+|.++++.|+ .|++|.++.. +.+++++++.|+..|+|++|++|++|+++|+|+|
T Consensus 7 ~~lAP~qv~Iipi~~~~~~~~~~~~a~~l~~~L~-~~i~v~~D~~-~~~~g~k~~~a~~~giP~~iiiG~ke~~~~~v~l 84 (126)
T d1nj8a1 7 PIVAPIQVVIVPLIFKGKEDIVMEKAKEIYEKLK-GKFRVHIDDR-DIRPGRKFNDWEIKGVPLRIEVGPKDIENKKITL 84 (126)
T ss_dssp TTSCSSSEEEEECCCSSCHHHHHHHHHHHHHHHH-TTSCEEECCS-CSCHHHHHHHHHHTTCSEEEEECHHHHHTTEEEE
T ss_pred hhhCCceEEEEeccCCCchHHHHHHHHHHHHHhc-cceeEEeecc-cchHHHHHHHHHHHHHHHHHhcccchhhCCEEEE
Confidence 3457889999987422 23467888889885 5999998777 6799999999999999999999999999999999
Q ss_pred EEcCCCcccccchHHHHHHHHHHHHhhcc
Q 000993 1162 RHLDVKKEKEVQRESLVRFLLDAIASQFR 1190 (1196)
Q Consensus 1162 k~l~~g~q~~v~~~el~~~l~~~l~~~~~ 1190 (1196)
|+++++++..++++++++.+.+.+.....
T Consensus 85 r~R~~~~~~~v~~~~l~~~i~~~l~~~~~ 113 (126)
T d1nj8a1 85 FRRDTMEKFQVDETQLMEVVEKTLNNIME 113 (126)
T ss_dssp EETTTCCEEEEETTSHHHHHHHHHHHHHH
T ss_pred EEcCCCceEEEcHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888775443
|
| >d1atia1 c.51.1.1 (A:395-505) Glycyl-tRNA synthetase (GlyRS), C-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Anticodon-binding domain-like superfamily: Class II aaRS ABD-related family: Anticodon-binding domain of Class II aaRS domain: Glycyl-tRNA synthetase (GlyRS), C-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=99.06 E-value=2.3e-10 Score=107.67 Aligned_cols=96 Identities=17% Similarity=0.119 Sum_probs=86.3
Q ss_pred CCceEEEEEcCC--CchHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCC---------
Q 000993 1089 AGTSVLVCSRGG--GGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKG--------- 1157 (1196)
Q Consensus 1089 ~~~~vlv~~~~~--~~~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g--------- 1157 (1196)
+|.+|.|++... ++...+|.++++.|++.|++|.++.. +.+++++++.|+..|+|++|+||++|+++|
T Consensus 3 AP~qv~Iipi~~~~~~~~~~a~~l~~~L~~~gi~v~~Ddr-~~~~G~K~~~~~~~gvP~~iiIG~kel~~g~~~~~~~~n 81 (111)
T d1atia1 3 APIKVAVIPLVKNRPEITEYAKRLKARLLALGLGRVLYED-TGNIGKAYRRHDEVGTPFAVTVDYDTIGQSKDGTTRLKD 81 (111)
T ss_dssp CSCSEEEEESCSSCHHHHHHHHHHHHHHHTTCSSCEEECC-CSCHHHHHHHHHHTTCSEEEEECHHHHTCCTTSCCTTTT
T ss_pred CCcEEEEEEccCCCHHHHHHHHHHHhhhccccceeEeecC-CCCHHHHHHHHHHcCCCEEEEECcHHhhcccccccccCc
Confidence 578899998852 35678899999999999999998876 679999999999999999999999999875
Q ss_pred eEEEEEcCCCcccccchHHHHHHHHHHH
Q 000993 1158 LVKVRHLDVKKEKEVQRESLVRFLLDAI 1185 (1196)
Q Consensus 1158 ~v~vk~l~~g~q~~v~~~el~~~l~~~l 1185 (1196)
+|+||+++++++..+++++++++|++.|
T Consensus 82 tV~ir~Rd~~~~~~v~i~e~~~~l~~~l 109 (111)
T d1atia1 82 TVTVRDRDTMEQIRLHVDELEGFLRERL 109 (111)
T ss_dssp EEEEEETTTCCEEEEEHHHHHHHHHHHH
T ss_pred eEEEEEcCCCceEEEEHHHHHHHHHHHh
Confidence 7999999999999999999999998876
|
| >d1b76a2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Glycyl-tRNA synthetase (GlyRS) species: Thermus thermophilus [TaxId: 274]
Probab=98.98 E-value=2.8e-10 Score=127.64 Aligned_cols=145 Identities=13% Similarity=0.069 Sum_probs=112.6
Q ss_pred CcccccchhhhHhhHHHHHHHHHHH--HHcCCccccccce------eecCCCcccccceEEEeec---------------
Q 000993 742 TSSIQYSDLDTELRDYVVQVTKEMF--RQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTH--------------- 798 (1196)
Q Consensus 742 ~G~~D~~p~ea~~~~~I~~~i~~~f--~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~--------------- 798 (1196)
.|+.||.|..+++++.|++.|++-| .+.||.+|.||++ ..+++.+.+.+.||...+.
T Consensus 29 ~G~y~ygP~G~~l~~~i~~~wr~~~v~~~~~~~ev~tp~i~~~~lw~~SGH~~~f~d~m~~~~~~~~~~~~~~~~~~~~~ 108 (331)
T d1b76a2 29 QGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRLVLHYSGHEATFADPMVDNAKARYWTPPRYFNMMFQD 108 (331)
T ss_dssp TTCEEECHHHHHHHHHHHHHHHHHHTTSCSSEEEEBCCSEEEHHHHHHTSHHHHCEEEECBSSSCBCCCCCEEEECCEEE
T ss_pred eeEeccCCcHHHHHHHHHHHHHHHHHhccCCeEEEeccccCChHHhccCccccccCCceeeecccccccCccchhhcccc
Confidence 8999999999999999999999987 6899999999999 3344555566666654331
Q ss_pred -------CCceEeecCCCcHHHH----HH-HHhCCCCceeEEEecCeeecCCCC----CCCcceeEeEEEEeCCCCccch
Q 000993 799 -------GGDLLELSHELRLPFI----RW-AISNQKSSFKRYEISSVYRRAIGH----SPPNRYLQGDFDIIGGASALTE 862 (1196)
Q Consensus 799 -------~G~~laLRPD~T~~ia----R~-~a~~~~~P~r~~Y~G~VfR~e~~~----~~~~ef~Q~GvEiiG~~~~~aD 862 (1196)
.+...-|||.++.++. +. ...++.+|+|++++|.+||+|... .|.|||+|.++++|+.++...+
T Consensus 109 ~~~~~~~~~~~~~lr~~t~~~~~~~~~~~~~~syk~LP~~~aqig~~fR~E~s~~~gl~RvReFtq~D~~~F~~~~q~~~ 188 (331)
T d1b76a2 109 LRGPRGGRGLLAYLRPETAQGIFVNFKNVLDATSRKLGFGIAQIGKAFRNEITPRNFIFRVREFEQMEIEYFVRPGEDEY 188 (331)
T ss_dssp ECSSSCCGGGEEEECSCTHHHHHTTHHHHHHHHTCCSSEEEEEEEEEECCCSSCCTTTTSCSEEEEEEEEEEECGGGHHH
T ss_pred ccccccccCCcccccCcchhhHHHHHHhHHhccccccchhhhhccceecccccccccccccchhhhhhhhhhcCCcchhH
Confidence 2567789998887653 32 234778899999999999997532 3566799999999998776544
Q ss_pred --HHHHHHHHHHHHHcCCCCceEEEeC
Q 000993 863 --AEVLKVTMDIVTRFFHAESCDIHLN 887 (1196)
Q Consensus 863 --aEvI~la~~~L~~lgi~~~~~i~Lg 887 (1196)
..++..+.+.+..+|+.. +.+...
T Consensus 189 ~~~~~~~~~~~~~~~~g~~~-~~lr~~ 214 (331)
T d1b76a2 189 WHRYWVEERLKWWQEMGLSR-ENLVPY 214 (331)
T ss_dssp HHHHHHHHHHHHHHHTTCCG-GGEEEE
T ss_pred HHHHHHHHHHHHHHHhhccc-hheeee
Confidence 477888999999999875 555544
|
| >d1hc7a1 c.51.1.1 (A:277-403) Prolyl-tRNA synthetase (ProRS) domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Anticodon-binding domain-like superfamily: Class II aaRS ABD-related family: Anticodon-binding domain of Class II aaRS domain: Prolyl-tRNA synthetase (ProRS) domain species: Thermus thermophilus [TaxId: 274]
Probab=98.94 E-value=2.4e-09 Score=103.09 Aligned_cols=102 Identities=10% Similarity=0.016 Sum_probs=86.7
Q ss_pred CCCCCceEEEEEcCCCc----hHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEE
Q 000993 1086 RNEAGTSVLVCSRGGGG----LLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKV 1161 (1196)
Q Consensus 1086 ~~~~~~~vlv~~~~~~~----~~~~a~~~a~~Lr~~Gi~vel~~~~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~v 1161 (1196)
...+|.+|.|++...+. ...+|.+++..|++.|++|.+++....+++++++.|+..|+|++|+||++|+++|+|+|
T Consensus 7 ~~lAP~qv~Iipi~~~~~~~~~~~~a~~i~~~L~~~girv~~Dd~~~~~~g~K~~~a~~~giP~~iiiG~~e~~~~~v~v 86 (127)
T d1hc7a1 7 PRLAPIQVVIVPIYKDESRERVLEAAQGLRQALLAQGLRVHLDDRDQHTPGYKFHEWELKGVPFRVELGPKDLEGGQAVL 86 (127)
T ss_dssp TTTCSCSEEEEECCCTTTHHHHHHHHHHHHHHHHHTTCCEEECCCSSSCHHHHHHHHHHTTCSEEEEECHHHHHTTEEEE
T ss_pred hhhCCeeEEEEEecCChhhHHHHHHHHHHHHHHHHcCCeeEEecccchhHHHHHHHHHhhcCCeeEEechhhhcCceEEE
Confidence 34578899999885322 24678899999999999999887756679999999999999999999999999999999
Q ss_pred EEcCCCcccccchHHHHHHHHHHHHhh
Q 000993 1162 RHLDVKKEKEVQRESLVRFLLDAIASQ 1188 (1196)
Q Consensus 1162 k~l~~g~q~~v~~~el~~~l~~~l~~~ 1188 (1196)
+.+++ ++..++++++++.|.+.+...
T Consensus 87 ~~R~~-~k~~i~~~~~~~~i~~~l~~i 112 (127)
T d1hc7a1 87 ASRLG-GKETLPLAALPEALPGKLDAF 112 (127)
T ss_dssp EETTS-CCCEEEGGGHHHHHHHHHHHH
T ss_pred EeccC-CCceeeHHHHHHHHHHHHHHH
Confidence 99865 466799999999998877643
|
| >d1nj1a3 d.104.1.1 (A:19-283) Prolyl-tRNA synthetase (ProRS) {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Prolyl-tRNA synthetase (ProRS) species: Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]
Probab=98.94 E-value=1.3e-09 Score=118.68 Aligned_cols=140 Identities=7% Similarity=0.023 Sum_probs=103.4
Q ss_pred CCCCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecC---CCcccccceEEEe----ecCCceEeecC
Q 000993 739 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG---DCPQFKRNTVKLL----THGGDLLELSH 807 (1196)
Q Consensus 739 ~~~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~---~~~~~~~~my~f~----D~~G~~laLRP 807 (1196)
+..+|+..|+|..+.+++.|++.+++.. ..||++|.||++ .+.. +.+...++||++. |+.++.++|||
T Consensus 20 ~~~~G~~~~lP~G~~i~~~i~~~~~~~~-~~G~~ev~~P~l~~~~~l~~~sgh~~~~~~e~f~~~~~~~~~~~~~~~L~p 98 (265)
T d1nj1a3 20 YPVKGMHVWMPHGFMIRKNTLKILRRIL-DRDHEEVLFPLLVPEDELAKEAIHVKGFEDEVYWVTHGGLSKLQRKLALRP 98 (265)
T ss_dssp CSSTTCCEECHHHHHHHHHHHHHHHHHH-TTTCEECCCCSEEEHHHHTTSHHHHHHTTTTCCEEEEETTEEEEEEEEECS
T ss_pred CCCCceEEEcccHHHHHHHHHHHHHHHH-HhcCceehhhhhhhhhhhhhcccccccccccceeeeccCccccceeEEeec
Confidence 4557999999999999999999998875 569999999987 2322 2456788999887 45578899999
Q ss_pred CCcHHHHHHHHh----CCCCceeEEEecCeeecCCCC----CCCcceeEeEEEEeCCCC-ccchH---HHHHHHHHHHHH
Q 000993 808 ELRLPFIRWAIS----NQKSSFKRYEISSVYRRAIGH----SPPNRYLQGDFDIIGGAS-ALTEA---EVLKVTMDIVTR 875 (1196)
Q Consensus 808 D~T~~iaR~~a~----~~~~P~r~~Y~G~VfR~e~~~----~~~~ef~Q~GvEiiG~~~-~~aDa---EvI~la~~~L~~ 875 (1196)
.-.++++.+++. ++.+|+|+|++|++||+|... .|.++|+|.....+...+ ..++. .++....+++..
T Consensus 99 t~~~~~~~~~~~~~~SyrdLPlr~~q~~~~fR~E~~~~~Gl~R~reF~~~~d~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 178 (265)
T d1nj1a3 99 TSETVMYPMFALWVRSHTDLPMRFYQVVNTFRYETKHTRPLIRVREITTFKEAHTIHATASEAEEQVERAVEIYKEFFNS 178 (265)
T ss_dssp SSHHHHHHHHHHHCCBTTTCCEEEEEEEEEECCCCSCCBTTTBCSEEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccceEEeeeeeeccccccceEEEeeccceeeecccCcCCEEEEEEEEeccceeecCCHHHHHHHhhhhHHHHHHHHhh
Confidence 666667677665 345799999999999998432 255679887555443333 33443 456666677777
Q ss_pred cCCC
Q 000993 876 FFHA 879 (1196)
Q Consensus 876 lgi~ 879 (1196)
+|+.
T Consensus 179 l~l~ 182 (265)
T d1nj1a3 179 LGIP 182 (265)
T ss_dssp HTCC
T ss_pred cCCc
Confidence 7775
|
| >d1hc7a2 d.104.1.1 (A:5-276) Prolyl-tRNA synthetase (ProRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Prolyl-tRNA synthetase (ProRS) species: Thermus thermophilus [TaxId: 274]
Probab=98.86 E-value=6.8e-09 Score=113.01 Aligned_cols=137 Identities=12% Similarity=0.110 Sum_probs=103.5
Q ss_pred CCcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCC---CcccccceEEEeecCC----ceEeecCCC
Q 000993 741 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD---CPQFKRNTVKLLTHGG----DLLELSHEL 809 (1196)
Q Consensus 741 ~~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~---~~~~~~~my~f~D~~G----~~laLRPD~ 809 (1196)
.+|+..|+|..+++++.|++.+++.+.++||++|.||.+ ++... .+...++||.+.+.++ +.++|||.-
T Consensus 29 ~~G~~~~lP~G~~l~~~l~~~~~~~~~~~G~~eV~~P~l~~~~l~~~sg~~~~~~~~~m~~~~~~~~~~~~~~~~L~pt~ 108 (272)
T d1hc7a2 29 VRGTIVVRPYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFLRKEAEHVEGFSPELAVVTHAGGEELEEPLAVRPTS 108 (272)
T ss_dssp STTCEEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEESTTC---------CCTTCEEEEEESSSEEEEEEEECSCS
T ss_pred CCCeEEECccHHHHHHHHHHHHHHHHHHcCCeEEeeccccchHHhhhcccchhhcccceeeeeccccccccchhhccccc
Confidence 469999999999999999999999999999999999988 22222 4557889999887764 569999988
Q ss_pred cHHHHHHHHhC----CCCceeEEEecCeeecCCCC---CCCcceeEeEEEEeCCCCccchHH---HHHHHHHHHHHcC
Q 000993 810 RLPFIRWAISN----QKSSFKRYEISSVYRRAIGH---SPPNRYLQGDFDIIGGASALTEAE---VLKVTMDIVTRFF 877 (1196)
Q Consensus 810 T~~iaR~~a~~----~~~P~r~~Y~G~VfR~e~~~---~~~~ef~Q~GvEiiG~~~~~aDaE---vI~la~~~L~~lg 877 (1196)
+++++.++... +.+|+|+|+++.+||+|... .++++|.|.+++.+......++.| ++....+.+..++
T Consensus 109 e~~~~~~~~~~~~s~~~LPlr~~~~~~~fR~E~~~~g~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (272)
T d1hc7a2 109 ETVIGYMWSKWIRSWRDLPQLLNQWGNVVRWEMRTRPFLRTSEFLWQEGHTAHATREEAEEEVRRMLSIYARLAREYA 186 (272)
T ss_dssp HHHHHHHHHHHCCBGGGCCEEEEEEEEEECCCSSCBTTTBCSEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceeehhhceeccccccceeeeecccccccccccccccceEEEEEEhhhhhhcccccchhHHHHHHHHHHHHHHHhc
Confidence 88888877662 35699999999999998644 234459999999998766555543 3334444444443
|
| >d2daxa1 d.20.1.3 (A:8-147) Uncharacterized protein C21orf6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: RWD domain domain: Uncharacterized protein C21orf6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.76 E-value=5.4e-09 Score=102.22 Aligned_cols=88 Identities=19% Similarity=0.191 Sum_probs=74.1
Q ss_pred ceEeecCCCCCCCCccceeEEEEEeCCCCCCCCCceeeccCCCCCHHHHHHHHHHHHHHHHHh-hhCCCeEEEeeHHHHH
Q 000993 18 AQSKDHSSSTVDDNELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSN-AREGRVMIFNLVEAAQ 96 (1196)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~en-l~~Gm~miftl~~~~~ 96 (1196)
+|.+.+..+.. ++..+.+.|+|++|++||+++|.+.+... +++......|++.|.+++++| + |++|||++|+.+|
T Consensus 51 ~~~i~l~~~~~-~~~~~~l~L~~~lP~~YP~~~P~i~l~~~-~l~~~~~~~l~~~l~~~~~~~~~--Ge~~if~lve~lq 126 (140)
T d2daxa1 51 YFTINMNLDVS-DEKMAMFSLACILPFKYPAVLPEITVRSV-LLSRSQQTQLNTDLTAFLQKHCH--GDVCILNATEWVR 126 (140)
T ss_dssp EEEEEEEEECS-TTCEEEEEEEEEECSSTTSSCCCCEEECT-TSCHHHHHHHHHHHHHHHHHSSC--SSCCSHHHHHHHH
T ss_pred eEEEeeccCcc-cccCceEEEEEEecCcCCCcCCceeccCC-CCCHHHHHHHHHHHHHHHHHhcC--CCcHHHHHHHHHH
Confidence 55555554333 23468999999999999999999999875 788889999999999999887 6 9999999999999
Q ss_pred HHHHhhCCCCccc
Q 000993 97 EFLSEIVPLGQSN 109 (1196)
Q Consensus 97 e~l~~~~~~~~~~ 109 (1196)
|.+..++..+.+.
T Consensus 127 e~~~~~~~~~~~~ 139 (140)
T d2daxa1 127 EHASGYVSRDTSS 139 (140)
T ss_dssp HHHHHHCCCCCCC
T ss_pred HHHHHHhccCCCC
Confidence 9999999887653
|
| >d2dawa1 d.20.1.3 (A:8-148) RWD domain-containing protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: RWD domain domain: RWD domain-containing protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.59 E-value=1.5e-08 Score=99.16 Aligned_cols=74 Identities=12% Similarity=0.056 Sum_probs=66.7
Q ss_pred ccceeEEEEEeCCCCCCCCCceeeccCCCCCHHHHHHHHHHHHHHHHHh-hhCCCeEEEeeHHHHHHHHHhhCCCCcc
Q 000993 32 ELLSEEITALCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSN-AREGRVMIFNLVEAAQEFLSEIVPLGQS 108 (1196)
Q Consensus 32 ~~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~en-l~~Gm~miftl~~~~~e~l~~~~~~~~~ 108 (1196)
..+.+.|.|++|++||+++|.+.+.+ .+++......|.+.|.+.+++| + ||+|||++|+.+||-+..++-+.+.
T Consensus 66 ~~~~i~L~~~lp~~YP~~~P~i~~~~-~~l~~~~~~~l~~~l~~~~~e~~~--Ge~mif~lv~~lqe~~~~~l~~~~~ 140 (141)
T d2dawa1 66 PKVKIDLQVTMPHSYPYLALQLFGRS-SELDRHQQLLLNKGLTSYIGTFDP--GELCVCAAIQWLQDNSASYFLNRKL 140 (141)
T ss_dssp TTEEEEEEEEECSSTTSSCCEEEEEC-SSSCHHHHHHHHHHHHHHHTTSCT--TSCSHHHHHHHHHHTTHHHHCCCCC
T ss_pred ccceEEEEEEeCCCCCCCCCCceeec-cccCHHHHHHHHHHHHHHHHHhcC--CccHHHHHHHHHHHHHHHHHhhccC
Confidence 35889999999999999999999887 6799999999999999999887 8 9999999999999999888765543
|
| >d1e1oa2 d.104.1.1 (A:161-502) Lysyl-tRNA synthetase (LysRS) {Escherichia coli, gene lysU [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Lysyl-tRNA synthetase (LysRS) species: Escherichia coli, gene lysU [TaxId: 562]
Probab=98.04 E-value=6.3e-05 Score=83.75 Aligned_cols=102 Identities=9% Similarity=0.016 Sum_probs=68.7
Q ss_pred hhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEe-ecCCceEeecCCCcHHHHHHHHhCCCCceeEEE
Q 000993 751 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLL-THGGDLLELSHELRLPFIRWAISNQKSSFKRYE 829 (1196)
Q Consensus 751 ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~-D~~G~~laLRPD~T~~iaR~~a~~~~~P~r~~Y 829 (1196)
-.+++..+...+++.|.+.||-+|.||++.....+.. .+.|.+. +..+...-|+.---...-+.++.. --|+|+
T Consensus 22 ~~r~Rs~i~~~iR~ff~~~gFiEV~TPil~~~~~~~~--~~~f~~~~~~~~~~~yL~~Spql~~k~~l~~g---~~~vf~ 96 (342)
T d1e1oa2 22 TFVVRSKILAAIRQFMVARGFMEVETPMMQVIPGGAS--ARPFITHHNALDLDMYLRIAPELYLKRLVVGG---FERVFE 96 (342)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEECCCCSEESSCCSSC--CCCCEEEETTTTEEEEECSCSHHHHHHHHHHT---CCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCCccccCCCCC--CcceeecccCCCcccccchhhHHHHHHHhhhc---ccceee
Confidence 3678899999999999999999999999743322221 2333332 344666667663333333445432 349999
Q ss_pred ecCeeecCCCCCCC-cceeEeEEEEeCCC
Q 000993 830 ISSVYRRAIGHSPP-NRYLQGDFDIIGGA 857 (1196)
Q Consensus 830 ~G~VfR~e~~~~~~-~ef~Q~GvEiiG~~ 857 (1196)
+|+|||.|....+. .||+|+.+|.-+.+
T Consensus 97 i~p~FR~E~~~~rHl~EFtmlE~e~a~~~ 125 (342)
T d1e1oa2 97 INRNFRNEGISVRHNPEFTMMELYMAYAD 125 (342)
T ss_dssp EEEEECCCCCCC-CCSEEEEEEEEEESCC
T ss_pred eccccccccccccchHHHHHHHHHHHhhh
Confidence 99999987544333 37999999998864
|
| >d1g5ha2 d.104.1.1 (A:41-330) The aaRS-like accessory subunit of mitochondrial polymerase gamma, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: The aaRS-like accessory subunit of mitochondrial polymerase gamma, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.03 E-value=1.3e-06 Score=95.12 Aligned_cols=137 Identities=9% Similarity=0.003 Sum_probs=89.1
Q ss_pred Cccc-ccchhhhHhhHHHHHHHHHHHHHcCCccccccce----eecCCCcccccceEE--------------------E-
Q 000993 742 TSSI-QYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQFKRNTVK--------------------L- 795 (1196)
Q Consensus 742 ~G~~-D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~~~~~my~--------------------f- 795 (1196)
.|.. ||.|..+.+++.|++.|++.|.. .+..|.+|.. .+...+......+.. |
T Consensus 27 ~g~~~dyGP~G~~Lk~ni~~~w~~~~v~-~~~~v~~~d~~~~~~~~~sgh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (290)
T d1g5ha2 27 SGCHARFGPLGVELRKNLASQWWSSMVV-FREQVFAVDSLHQEPGSSQPRDSAFRLVSPESIREILQDREPSKEQLVAFL 105 (290)
T ss_dssp HCCSCCBCHHHHHHHHHHHHHHHHHHTT-TCTTEEECCCCSEECCCCSSCCCCCEEECHHHHHHHHCC---CHHHHHHHH
T ss_pred cccccccCCcHHHHHHHHHHHHHHHHHh-ccCceeeccccccccCCCccccchhhhccccccccccccccchhhhhhcce
Confidence 3444 99999999999999999998743 3456666654 111111111100000 0
Q ss_pred eecCCceEeecCCCcHH-----HHHHH-HhCCCCceeEEEecCeeecCCCC-------CCCcceeEeEEEEeCCCCccch
Q 000993 796 LTHGGDLLELSHELRLP-----FIRWA-ISNQKSSFKRYEISSVYRRAIGH-------SPPNRYLQGDFDIIGGASALTE 862 (1196)
Q Consensus 796 ~D~~G~~laLRPD~T~~-----iaR~~-a~~~~~P~r~~Y~G~VfR~e~~~-------~~~~ef~Q~GvEiiG~~~~~aD 862 (1196)
..-++....||| +|+| +.+.. .+++..|++++++|++||+|... -|.+||+|+.+|+|+.++...+
T Consensus 106 ~~~~~~~~yLRP-etaqg~~~~fkn~~~~~~~~LPf~iaq~g~~fR~E~~~~~~~~gl~RvReF~q~E~~~F~~pe~~~~ 184 (290)
T d1g5ha2 106 ENLLKTSGKLRA-TLLHGALEHYVNCLDLVNRKLPFGLAQIGVCFHPVSNSNQTPSSVTRVGEKTEASLVWFTPTRTSSQ 184 (290)
T ss_dssp HHHHHHSCEECS-CSHHHHHHTHHHHHHHTTTBSCEEEEEEEEEEEEEC---------CEEEEEEEEEEEEEECHHHHHH
T ss_pred eccccccceecc-ccchhHHHHHHHHHhhccCCCCcEEEEeccccccccccCCcccccceeeEeEeeeeEEEeCCcchHH
Confidence 011234567999 4544 33433 23567799999999999975321 2345799999999998765433
Q ss_pred --HHHHHHHHHHHHHcCCCC
Q 000993 863 --AEVLKVTMDIVTRFFHAE 880 (1196)
Q Consensus 863 --aEvI~la~~~L~~lgi~~ 880 (1196)
...+..+.++++.||+..
T Consensus 185 ~~~~~~~~~~~~~~~lGi~~ 204 (290)
T d1g5ha2 185 WLDFWLRHRLLWWRKFAMSP 204 (290)
T ss_dssp HHHHHHHHHHHHHHTTCSSG
T ss_pred HHHHHHHHHHHHHHHcCCCh
Confidence 478999999999999875
|
| >d1seta2 d.104.1.1 (A:111-421) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Seryl-tRNA synthetase (SerRS) species: Thermus thermophilus, strain hb27 [TaxId: 274]
Probab=97.75 E-value=5.1e-05 Score=82.86 Aligned_cols=139 Identities=9% Similarity=0.104 Sum_probs=103.8
Q ss_pred CcccccchhhhHhhHHHHHHHHHHHHHcCCccccccce----ee--cCCCcccccceEEEeecCCceEeecCCCcHHHHH
Q 000993 742 TSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIR 815 (1196)
Q Consensus 742 ~G~~D~~p~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR 815 (1196)
.+...+.+..+.+.+.+.+.+.+...+.||++|.+|.| .+ .+..+..++++|+.. ++.+.|+|---++++-
T Consensus 46 ~rfy~l~g~~a~Le~AL~~~~ld~~~~~gy~~v~~P~lv~~~~~~~~G~~p~f~~~~y~~~---~~~~~LipTsE~~l~~ 122 (311)
T d1seta2 46 SRSYALKGDLALYELALLRFAMDFMARRGFLPMTLPSYAREKAFLGTGHFPAYRDQVWAIA---ETDLYLTGTAEVVLNA 122 (311)
T ss_dssp SSCCCEEHHHHHHHHHHHHHHHHHHHHTTCEEEECCSEEEHHHHHHHTCTTTTGGGSCBBT---TSSEEECSSTHHHHHH
T ss_pred CceEEEECHHHHHHHHHHHHHHHhhhcccceEEeechhhccchhhhccccccccccccccc---ccceeecccccchhhh
Confidence 34445556778889999999999999999999999999 22 233556778899764 3568999966677766
Q ss_pred HHHhC----CCCceeEEEecCeeecCCCC--------CCCcceeEeEEEEeCCCCcc-ch---HHHHHHHHHHHHHcCCC
Q 000993 816 WAISN----QKSSFKRYEISSVYRRAIGH--------SPPNRYLQGDFDIIGGASAL-TE---AEVLKVTMDIVTRFFHA 879 (1196)
Q Consensus 816 ~~a~~----~~~P~r~~Y~G~VfR~e~~~--------~~~~ef~Q~GvEiiG~~~~~-aD---aEvI~la~~~L~~lgi~ 879 (1196)
+.... ..+|+|++..+++||+|... -|.++|..+...+++..++. ++ .|++..+.++++.|++.
T Consensus 123 ~~~~~i~~~~~LPlr~~~~s~cfR~Eag~~g~~trGL~RvhQF~kvE~~~~~~~~~e~s~~~~~~~~~~~~~~~~~L~lp 202 (311)
T d1seta2 123 LHSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLELP 202 (311)
T ss_dssp TTTTCEEEGGGCSEEEEEEEEEECCCCSCTTSSCSTTSSCSEEEEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hhhhhhhhhhhccceEEeecccchhhhccccccchhhhhhcccchhhhheeeccccccchhHHHHHHHHHHHHHHhhCCc
Confidence 55431 23699999999999997533 13345888888888876653 33 37899999999999995
Q ss_pred CceEEE
Q 000993 880 ESCDIH 885 (1196)
Q Consensus 880 ~~~~i~ 885 (1196)
|++.
T Consensus 203 --yrvv 206 (311)
T d1seta2 203 --YRLV 206 (311)
T ss_dssp --EEEE
T ss_pred --chhc
Confidence 6654
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=97.58 E-value=6.8e-05 Score=79.47 Aligned_cols=139 Identities=14% Similarity=0.111 Sum_probs=85.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeeeeecCccccC
Q 000993 380 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFD 458 (1196)
Q Consensus 380 ~~~y~~~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~~e~~~~~~~ 458 (1196)
+..|+..+..+.++.+.||+... +++.+++|........ ....+.+|+..++.+. +--+.+++...-
T Consensus 13 ~~~~~~~~~~~G~s~~~v~rv~~--~~~~~vlk~~~~~~~~--~~~~~~~E~~~l~~l~~~vpvP~vl~~~~-------- 80 (263)
T d1j7la_ 13 IEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKG--TTYDVEREKDMMLWLEGKLPVPKVLHFER-------- 80 (263)
T ss_dssp HTTSEEEECSCCCSSSEEEEEEC--SSCEEEEEEECGGGTT--STTCHHHHHHHHHHHTTTSCCCCEEEEEE--------
T ss_pred hhceEEEEcCCCCCCCcEEEEEe--CCCeEEEEEcCCCccc--chhhHHHHHHHHHHHhccCCCCcEEEEEe--------
Confidence 45677777655555678998753 5777888977533211 1234677888887773 322444443321
Q ss_pred CCCcCCCCcccccccccccccccccccccccccccEEEEEeeecCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 000993 459 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 537 (1196)
Q Consensus 459 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qIa~gL~yLHs 537 (1196)
.....|+||++++| .+...... ......++.+++..++.||+
T Consensus 81 --------------------------------~~~~~~lv~~~l~G~~~~~~~~~-----~~~~~~~~~~l~~~l~~lH~ 123 (263)
T d1j7la_ 81 --------------------------------HDGWSNLLMSEADGVLCSEEYED-----EQSPEKIIELYAECIRLFHS 123 (263)
T ss_dssp --------------------------------ETTEEEEEEECCSSEEHHHHTTT-----CSCHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------cCCceEEEEEecccccccccccc-----cccHHHHHHHHHHHHHHHhc
Confidence 13456899999987 55443211 11122234444445555552
Q ss_pred -----------------------------------------------------------CCCcccCCCcCcEEecCCCCe
Q 000993 538 -----------------------------------------------------------QGIIHRDLTPNNIFFDARNDI 558 (1196)
Q Consensus 538 -----------------------------------------------------------~gIiHrDLKp~NILld~~~~v 558 (1196)
..++|+|+.|.|||++.++.+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~ 203 (263)
T d1j7la_ 124 IDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVS 203 (263)
T ss_dssp SCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEE
T ss_pred cCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceE
Confidence 127899999999999977666
Q ss_pred EEeccCcch
Q 000993 559 KIGDFGLAK 567 (1196)
Q Consensus 559 KL~DFGlA~ 567 (1196)
-|.||+.+.
T Consensus 204 ~lIDwe~a~ 212 (263)
T d1j7la_ 204 GFIDLGRSG 212 (263)
T ss_dssp EECCCTTCE
T ss_pred EEeechhcc
Confidence 799999885
|
| >d1atia2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Glycyl-tRNA synthetase (GlyRS) species: Thermus thermophilus [TaxId: 274]
Probab=97.41 E-value=0.00025 Score=78.51 Aligned_cols=140 Identities=13% Similarity=0.045 Sum_probs=93.9
Q ss_pred CCcccccchhhhHhhHHHHHHHHHHHH--HcCCccccccce------eecCC--------------C---------c---
Q 000993 741 NTSSIQYSDLDTELRDYVVQVTKEMFR--QHCAKHLEIEPM------YLLGD--------------C---------P--- 786 (1196)
Q Consensus 741 ~~G~~D~~p~ea~~~~~I~~~i~~~f~--~~Gy~~I~tP~~------~~~~~--------------~---------~--- 786 (1196)
-.|+.||.|..+++++.|.+.|++-|- +-+..+|++|++ ..++| + +
T Consensus 28 laG~yDyGPlG~~LK~Ni~~~Ww~~fv~~~e~~~~id~~ii~p~~V~kASGHv~~F~D~mv~c~~~~~~~RaD~l~e~~~ 107 (394)
T d1atia2 28 LQGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRLVLHYSGHEATFADPMVDNRITKKRYRLDHLLKEQP 107 (394)
T ss_dssp CTTCEEECHHHHHHHHHHHHHHHHHHTTSCSSEEEEBCCSEEETTHHHHTSHHHHCEEEEEEC-----------------
T ss_pred cccccCcCccHHHHHHHHHHHHHHHHhhccCCEEEecccccCCHHHhhhcCCCCCCcccccccCCCCceecchhHHhhhh
Confidence 479999999999999999999988774 578888999988 00010 0 0
Q ss_pred -------------------------------------------------------ccccceEEE-eecC---CceEeecC
Q 000993 787 -------------------------------------------------------QFKRNTVKL-LTHG---GDLLELSH 807 (1196)
Q Consensus 787 -------------------------------------------------------~~~~~my~f-~D~~---G~~laLRP 807 (1196)
-.-+.||+. +... +...-|||
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~~g~~~~~t~~~~FNLMF~T~iGp~~~~~~~~yLRP 187 (394)
T d1atia2 108 EEVLKRLYRAMEVEEENLHALVQAMMQAPERAGGAMTAAGVLDPASGEPGDWTPPRYFNMMFQDLRGPRGGRGLLAYLRP 187 (394)
T ss_dssp ---------------------------------------------------CCCCEEEECBEEEECSSCCCGGGEEEECS
T ss_pred hhhhhhhhhhhhhhhhhHHHHHHHHhhChHhhhhhHHhhCCCCCCCCCcCCcCccchhhhhccccccccccccceeEECh
Confidence 001233331 1121 12456999
Q ss_pred CCcH----HHHHHHHh-CCCCceeEEEecCeeecCCC-C---CCCcceeEeEEEEeCCCCccch--HHHHHHHHHHHHHc
Q 000993 808 ELRL----PFIRWAIS-NQKSSFKRYEISSVYRRAIG-H---SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRF 876 (1196)
Q Consensus 808 D~T~----~iaR~~a~-~~~~P~r~~Y~G~VfR~e~~-~---~~~~ef~Q~GvEiiG~~~~~aD--aEvI~la~~~L~~l 876 (1196)
|..- .+.+++-. +...|+-+.++|++||+|.. + -|.|||+|+-+|+|..++...+ ..-+.-.+..+..+
T Consensus 188 ETAQGiFvnF~~~l~~~r~KlPFGiAQIGk~FRNEIsPr~~l~R~REF~q~EiE~Fv~P~~~~~~~~yw~~~~~~f~~~l 267 (394)
T d1atia2 188 ETAQGIFVNFKNVLDATSRKLGFGIAQIGKAFRNEITPRNFIFRVREFEQMEIEYFVRPGEDEYWHRYWVEERLKWWQEM 267 (394)
T ss_dssp SSHHHHHHTHHHHHHHHTCCSSEEEEEEEEEEBCCSSCCTGGGSCSEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHT
T ss_pred hhhhHHHHHHHHHHHHcccCCCceeeeeccccccccCcccCCcccccceeeeeEEEEeCCcchHHHHHHHHHHHHHHHHh
Confidence 8763 35565544 45679999999999999763 3 3677899999999987654332 23355556666666
Q ss_pred CCCC
Q 000993 877 FHAE 880 (1196)
Q Consensus 877 gi~~ 880 (1196)
|+..
T Consensus 268 Gi~~ 271 (394)
T d1atia2 268 GLSR 271 (394)
T ss_dssp TCCG
T ss_pred cCCc
Confidence 6653
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.31 E-value=0.00028 Score=79.89 Aligned_cols=62 Identities=23% Similarity=0.208 Sum_probs=37.7
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecC----CC-CchhHHHHHHHHHHHHhcC-C--CCeeeeee
Q 000993 386 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK----DK-SLPVNDRILREVATLSRLQ-H--QHVVRYYQ 447 (1196)
Q Consensus 386 ~~~LG~G~fG~Vy~a~~~~~g~~vAVK~i~~~----~~-~~~~~~~~~~Ev~iL~~L~-H--pnIV~l~~ 447 (1196)
.+.||.|....||++....+++.++||.-... .. ......+...|+..|+.+. + ..+++++.
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~ 100 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFY 100 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEE
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEE
Confidence 45789999999999988777889999975421 11 1112345667888887762 2 33555553
|
| >d1jjca_ d.104.1.1 (A:) Phenyl-tRNA synthetase (PheRS) alpha subunit, PheS {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Phenyl-tRNA synthetase (PheRS) alpha subunit, PheS species: Thermus thermophilus [TaxId: 274]
Probab=97.18 E-value=0.0012 Score=69.49 Aligned_cols=120 Identities=14% Similarity=0.170 Sum_probs=81.6
Q ss_pred hHHHHHHHHHHHHHcCCccccccce-----ee----c--CC-CcccccceEEEeecC-----------CceEeecCCCcH
Q 000993 755 RDYVVQVTKEMFRQHCAKHLEIEPM-----YL----L--GD-CPQFKRNTVKLLTHG-----------GDLLELSHELRL 811 (1196)
Q Consensus 755 ~~~I~~~i~~~f~~~Gy~~I~tP~~-----~~----~--~~-~~~~~~~my~f~D~~-----------G~~laLRPD~T~ 811 (1196)
...+.+.++++|.+.||++++.|.+ .| . .+ .-.. ...|-+.+.. ...++||.-.|+
T Consensus 19 l~~~~~~i~~if~~~GF~~~~gp~ies~~~NFDaLn~P~dHPAR~~-~DTfYi~~~~~~~~~~~~~~~~~~~lLRTHTS~ 97 (266)
T d1jjca_ 19 ITLMERELVEIFRALGYQAVEGPEVESEFFNFDALNIPEHHPARDM-WDTFWLTGEGFRLEGPLGEEVEGRLLLRTHTSP 97 (266)
T ss_dssp HHHHHHHHHHHHHTTTCEECCCCSEEEHHHHTGGGTCCTTSGGGGG-SCCCBEECSSCCEECTTSCEECSCEEECSSSTH
T ss_pred HHHHHHHHHHHHHHcCCeEeeCCccccchhhhhcccCCcccchhcc-cceEEEecccccccCcccccchhhhhhccCCcH
Confidence 3577888999999999999999988 11 1 11 1112 2234343321 245799999998
Q ss_pred HHHHHHHhCCCCceeEEEecCeeecCC-CCCCCcceeEeEEEEeCCCCccchHHHHHHHHHHHHHcCC
Q 000993 812 PFIRWAISNQKSSFKRYEISSVYRRAI-GHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFH 878 (1196)
Q Consensus 812 ~iaR~~a~~~~~P~r~~Y~G~VfR~e~-~~~~~~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~lgi 878 (1196)
--+|.+..+ ..|+|+++.|+|||++. .......|+|+..=+++..-..+ .+...+.++++.++.
T Consensus 98 ~q~r~~~~~-~~p~~~~~~g~VyRrd~iD~tH~p~FhQ~eg~~vd~~~~~~--~Lk~~l~~~~~~~f~ 162 (266)
T d1jjca_ 98 MQVRYMVAH-TPPFRIVVPGRVFRFEQTDATHEAVFHQLEGLVVGEGIAMA--HLKGAIYELAQALFG 162 (266)
T ss_dssp HHHHHHHHS-CSSEEEEEEEEEECCSCCCSSCCSEEEEEEEEEEETTCCHH--HHHHHHHHHHHHHHC
T ss_pred HHHHHHhcc-CCCceEEecccceecCCCCCcccccceeeeeeeccccccHH--HHHHHHHHHHHHhcC
Confidence 888887654 56999999999999965 44455579999998887654443 344555566655533
|
| >d1c0aa3 d.104.1.1 (A:107-287,A:421-585) Aspartyl-tRNA synthetase (AspRS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Aspartyl-tRNA synthetase (AspRS) species: Escherichia coli [TaxId: 562]
Probab=97.16 E-value=0.0012 Score=73.10 Aligned_cols=102 Identities=14% Similarity=0.105 Sum_probs=72.3
Q ss_pred hhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEE-eecCCceEeecCCCcHHHHHHHHhCCCCceeEEE
Q 000993 751 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKL-LTHGGDLLELSHELRLPFIRWAISNQKSSFKRYE 829 (1196)
Q Consensus 751 ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f-~D~~G~~laLRPD~T~~iaR~~a~~~~~P~r~~Y 829 (1196)
-.+++..|.+.+|+.|...||-+|+||++.-... +. ....+.+ ....|+..-|+---....-|.++.. --|+|+
T Consensus 31 ilr~Rs~i~~~iR~ff~~~gFlEV~TPiL~~~~~-~g-~~~~~~~~~~~~~~~~~L~~Spel~lk~ll~~g---~~~Vf~ 105 (346)
T d1c0aa3 31 RLKTRAKITSLVRRFMDDHGFLDIETPMLTKATP-EG-ARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSG---FDRYYQ 105 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSSBCCCS-SS-SCCCEEECSSSTTCEEECCSCSHHHHHHHHHTT---CCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCccCCCCC-cc-ccccccccccCCCccccCCcCHHHHHHHHhhcC---CCceEE
Confidence 3578899999999999999999999999833322 11 1223332 3345777778876555555666532 249999
Q ss_pred ecCeeecCCCCCCC-cceeEeEEEEeCCC
Q 000993 830 ISSVYRRAIGHSPP-NRYLQGDFDIIGGA 857 (1196)
Q Consensus 830 ~G~VfR~e~~~~~~-~ef~Q~GvEiiG~~ 857 (1196)
+|+|||+|....++ .||+++.+|.-+.+
T Consensus 106 i~~~FR~E~~~~~H~~EFtmLE~e~a~~~ 134 (346)
T d1c0aa3 106 IVKCFRDEDLRADRQPEFTQIDVETSFMT 134 (346)
T ss_dssp EEEEECCCCCBTTBCSEEEEEEEEEESCC
T ss_pred EeeeccccccCchhhhHhhhhcccccccc
Confidence 99999997655443 38999999987753
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=96.96 E-value=0.00097 Score=69.80 Aligned_cols=28 Identities=21% Similarity=0.164 Sum_probs=25.0
Q ss_pred CcccCCCcCcEEecCCCCeEEeccCcch
Q 000993 540 IIHRDLTPNNIFFDARNDIKIGDFGLAK 567 (1196)
Q Consensus 540 IiHrDLKp~NILld~~~~vKL~DFGlA~ 567 (1196)
++|+|+.|.|||++.+..+-|+||+.+.
T Consensus 177 liHgD~~~~Nvl~~~~~~~~iID~~~~~ 204 (255)
T d1nd4a_ 177 VTHGDACLPNIMVENGRFSGFIDCGRLG 204 (255)
T ss_dssp EECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred EEeCCCCCcceEEeCCceEEEEEchhcc
Confidence 7999999999999987667899999875
|
| >d1eova2 d.104.1.1 (A:205-557) Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Aspartyl-tRNA synthetase (AspRS) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.80 E-value=0.003 Score=70.03 Aligned_cols=102 Identities=9% Similarity=0.067 Sum_probs=69.6
Q ss_pred hhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEeecCCceEeecCCCcHHHHHHHHhCCCCceeEEEe
Q 000993 751 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEI 830 (1196)
Q Consensus 751 ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~~~~P~r~~Y~ 830 (1196)
-.++|..|.+.+|+.|.+.||-||+||++.-...+. ..+.|...-. +...-||----...-|.++.. =-|+|++
T Consensus 43 ilr~Rs~i~~~iR~ff~~~gflEV~TPiL~~~~~eg--~~~~f~~~~~-~~~~yL~~Spel~lk~ll~~g---~~~vf~I 116 (353)
T d1eova2 43 IFRIQAGVCELFREYLATKKFTEVHTPKLLGAPSEG--GSSVFEVTYF-KGKAYLAQSPQFNKQQLIVAD---FERVYEI 116 (353)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSEESSCSSS--SSCCCEEEET-TEEEEECSCTHHHHHHHHHTT---CCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCccCCCCCcc--hhccccceee-CCcceeccchhhhhhhhhhcc---cccceee
Confidence 367788999999999999999999999984332211 2234443322 334447764434444666532 2389999
Q ss_pred cCeeecCCCCCC-C-cceeEeEEEEeCCCC
Q 000993 831 SSVYRRAIGHSP-P-NRYLQGDFDIIGGAS 858 (1196)
Q Consensus 831 G~VfR~e~~~~~-~-~ef~Q~GvEiiG~~~ 858 (1196)
|++||+|..... . -||+|+.+|.-+.+.
T Consensus 117 ~~~FR~E~~~~~rH~pEFtmLE~y~a~~d~ 146 (353)
T d1eova2 117 GPVFRAENSNTHRHMTEFTGLDMEMAFEEH 146 (353)
T ss_dssp EEEECCCCCCCTTCCSEEEEEEEEEECSSC
T ss_pred chhhhccccccccccchhcccccccccchh
Confidence 999999765543 3 389999999877543
|
| >d1l0wa3 d.104.1.1 (A:105-294,A:415-580) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-1 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Aspartyl-tRNA synthetase (AspRS) species: Thermus thermophilus, AspRS-1 [TaxId: 274]
Probab=96.73 E-value=0.0047 Score=68.47 Aligned_cols=103 Identities=12% Similarity=0.076 Sum_probs=72.5
Q ss_pred hhhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEE-eecCCceEeecCCCcHHHHHHHHhCCCCceeEE
Q 000993 750 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKL-LTHGGDLLELSHELRLPFIRWAISNQKSSFKRY 828 (1196)
Q Consensus 750 ~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f-~D~~G~~laLRPD~T~~iaR~~a~~~~~P~r~~ 828 (1196)
.-.+++..+.+.+++.|.+.||-+|.||++.-... +. ....+.. .+..|...-|+----...-|.++.. --|+|
T Consensus 38 ~ilr~Rs~i~~~iR~ff~~~gfiEV~TP~L~~~~~-eg-~~~~~~~~~~~~~~~~yL~~Spel~lk~ll~~g---~~~Vf 112 (356)
T d1l0wa3 38 ENLRLRHRVIKAIWDFLDREGFVQVETPFLTKSTP-EG-ARDFLVPYRHEPGLFYALPQSPQLFKQMLMVAG---LDRYF 112 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSSBCCCS-SS-SCCCEEECTTSTTEEEECCSCSHHHHHHHHHTT---CSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEECCccccCCC-cc-cccchhhhhcccccccCCCcChhHHHHHhhhcc---cCcEE
Confidence 34678899999999999999999999999733222 11 1223332 3455776667764444455555532 24999
Q ss_pred EecCeeecCCCCCCCc-ceeEeEEEEeCCC
Q 000993 829 EISSVYRRAIGHSPPN-RYLQGDFDIIGGA 857 (1196)
Q Consensus 829 Y~G~VfR~e~~~~~~~-ef~Q~GvEiiG~~ 857 (1196)
++|+|||.|....+.. ||+++.+|..+.+
T Consensus 113 ~i~~~FRaE~~~t~H~~EFtmLE~e~~~~~ 142 (356)
T d1l0wa3 113 QIARCFRDEDLRADRQPDFTQLDLEMSFVE 142 (356)
T ss_dssp EEEEEECCCCCCSSCCSEEEEEEEEEESCC
T ss_pred EEeccccccccCCcchhhhhHHHHhhhHHH
Confidence 9999999976554443 7999999999864
|
| >d1b8aa2 d.104.1.1 (A:104-438) Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococcus kodakaraensis [TaxId: 311400]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Aspartyl-tRNA synthetase (AspRS) species: Archaeon Pyrococcus kodakaraensis [TaxId: 311400]
Probab=96.73 E-value=0.0042 Score=68.26 Aligned_cols=100 Identities=12% Similarity=0.040 Sum_probs=71.8
Q ss_pred hhhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEeecCCceEeecCCCcHHHHHHHHhCCCCceeEEE
Q 000993 750 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYE 829 (1196)
Q Consensus 750 ~ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~~~~P~r~~Y 829 (1196)
.-.++|..|.+.+|+.|.+.||-||+||++.....+. ..+.|.+. ..++.+-||-.--...-|.++.. --|+|+
T Consensus 32 ~~l~~Rs~i~~~iR~ff~~~gflEV~TPil~~~~~~~--~~~~f~~~-~~~~~~yL~~SpE~~lkrll~~g---~~~if~ 105 (335)
T d1b8aa2 32 AIFKIRSSVFKAVRDFFHENGFIEIHTPKIIATATEG--GTELFPMK-YFEEDAFLAESPQLYKEIMMASG---LDRVYE 105 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESCCCSS--SSSCCEEE-ETTEEEEECSCSHHHHHHGGGTT---CCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEECCccCccCCch--hhhhcccc-ccccccccccChHHHHHHHHhhh---hhhHHH
Confidence 3467889999999999999999999999984333211 22334443 34677889976666666776642 349999
Q ss_pred ecCeeecCCCCC--CCcceeEeEEEEeC
Q 000993 830 ISSVYRRAIGHS--PPNRYLQGDFDIIG 855 (1196)
Q Consensus 830 ~G~VfR~e~~~~--~~~ef~Q~GvEiiG 855 (1196)
+|+|||+|.... ...||+|...+.-.
T Consensus 106 i~~~FR~e~~~~~rh~~Ef~~le~~~~~ 133 (335)
T d1b8aa2 106 IAPIFRAEEHNTTRHLNEAWSIDSEMAF 133 (335)
T ss_dssp EEEEECCCSSCCSSCCSEEEEEEEEEES
T ss_pred hhcccccccccccccchHHHhhhHHHHH
Confidence 999999976553 23489999777654
|
| >d1nnha_ d.104.1.1 (A:) Hypothetical protein PF1951 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Hypothetical protein PF1951 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=96.68 E-value=0.0038 Score=67.24 Aligned_cols=117 Identities=12% Similarity=0.069 Sum_probs=75.4
Q ss_pred hhHhhHHHHHHHHHHHHHcCCcccccccee--ecCC---CcccccceEEEeecCCceEeecCCCcHHHHHHHHhCCCCce
Q 000993 751 DTELRDYVVQVTKEMFRQHCAKHLEIEPMY--LLGD---CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSF 825 (1196)
Q Consensus 751 ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~--~~~~---~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~~~~P~ 825 (1196)
-.+++..|.+.+|+.|.+.||-+|.||++. ..+. +....-..++ .+.-|+.+-|+.---.-.-|.++... -
T Consensus 13 il~~Rs~i~~~iR~ff~~~gf~EV~tPil~~~~~~~~~~~~~~~~~~~~-~~~~~~~~yL~~SPel~lk~lla~g~---~ 88 (293)
T d1nnha_ 13 TLDIQTKILEYMTDFFVKEGFKWLLPVIISPITDPLWPDPAGEGMEPAE-VEIYGVKMRLTHSMILHKQLAIAMGL---K 88 (293)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEECCCCEESCCCCCCSCTTCCCCCCCE-EEETTEEEEECSCSHHHHHHHHHTTC---C
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEcCCcccccCCCCCCccccCcccccc-ccCCCceeecccChhhhHHHHHHhcc---c
Confidence 367788999999999999999999999982 1111 1111111222 24457888898644444445665322 3
Q ss_pred eEEEecCeeecCCCC--CCC--cceeEeEEEEeCCCCccchHHHHHHHHHHHHH
Q 000993 826 KRYEISSVYRRAIGH--SPP--NRYLQGDFDIIGGASALTEAEVLKVTMDIVTR 875 (1196)
Q Consensus 826 r~~Y~G~VfR~e~~~--~~~--~ef~Q~GvEiiG~~~~~aDaEvI~la~~~L~~ 875 (1196)
|+|++|+|||+|... .+| -||+|+.+|.-+.+ . -+++.++-+.++.
T Consensus 89 ~Vf~I~~~FR~E~~~s~t~RH~~EFtmLE~e~~~~d-~---~d~m~~~e~li~~ 138 (293)
T d1nnha_ 89 KIFVLSPNIRLESRQKDDGRHAYEFTQLDFEVERAK-M---EDIMRLIERLVYG 138 (293)
T ss_dssp EEEEEEEEECCCCGGGCSSSCCSEEEEEEEEEETCC-H---HHHHHHHHHHHHH
T ss_pred cceeechhhhcCcccCCCCccchhhhhhcccccccc-H---HHHHHHHHHHHHH
Confidence 899999999987432 222 38999999976532 1 1466666665543
|
| >d1n9wa2 d.104.1.1 (A:111-414) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-2 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Aspartyl-tRNA synthetase (AspRS) species: Thermus thermophilus, AspRS-2 [TaxId: 274]
Probab=95.85 E-value=0.0061 Score=65.99 Aligned_cols=100 Identities=14% Similarity=0.103 Sum_probs=48.9
Q ss_pred hhHhhHHHHHHHHHHHHHcCCccccccceeecCCCcccccceEEEeecCCceEeecCCCcHHHHHHHHhCCCCceeEEEe
Q 000993 751 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEI 830 (1196)
Q Consensus 751 ea~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~a~~~~~P~r~~Y~ 830 (1196)
-.++|.+|...+|+.|...||-||.||++.-.+. +.....|.. +.-|+.+-|+.-... ..|.++.. --|+|++
T Consensus 14 ~l~~Rs~i~~~iR~ff~~~gf~Ev~TP~l~~~~~--e~~~~~f~~-~~~~~~~~L~~Spel-~k~ll~~g---~~~if~i 86 (304)
T d1n9wa2 14 PLKVQAALVRGFRRYLDRQDFTEIFTPKVVRAGA--EGGSGLFGV-DYFEKRAYLAQSPQL-YKQIMVGV---FERVYEV 86 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCC-------------------------------CHH-HHHHHHHH---HSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCccCCCCC--CCCCceECC-cccccchhccccHHH-HHHHhhcc---cccceee
Confidence 3677889999999999999999999999833222 112233432 333455556654443 35655542 2389999
Q ss_pred cCeeecCCCCCC--CcceeEeEEEEeCCC
Q 000993 831 SSVYRRAIGHSP--PNRYLQGDFDIIGGA 857 (1196)
Q Consensus 831 G~VfR~e~~~~~--~~ef~Q~GvEiiG~~ 857 (1196)
|+|||.|..... ..||+|+.++.-...
T Consensus 87 ~~~FR~ee~~~~rh~~EF~~le~~~~~~~ 115 (304)
T d1n9wa2 87 APVWRMEEHHTSRHLNEYLSLDVEMGFIA 115 (304)
T ss_dssp EEC-------------CCEEEEEEEESCS
T ss_pred hhhcccccccccccccHHHHHHHHHhhhh
Confidence 999998754432 348999999987543
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=95.50 E-value=0.011 Score=64.24 Aligned_cols=44 Identities=27% Similarity=0.335 Sum_probs=31.7
Q ss_pred EEEEEEEEccCCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcCCCCe
Q 000993 395 GHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 442 (1196)
Q Consensus 395 G~Vy~a~~~~~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~HpnI 442 (1196)
-.||++... +|..|++|+.+....+ ..++..|...+..|....|
T Consensus 36 N~vy~v~~~-dg~~~VlK~~rp~~~s---~~~i~~E~~~l~~L~~~gi 79 (325)
T d1zyla1 36 NRVYQFQDE-DRRRFVVKFYRPERWT---ADQILEEHQFALQLVNDEV 79 (325)
T ss_dssp SEEEEECCT-TCCCEEEEEECTTTSC---HHHHHHHHHHHHHHHHTTC
T ss_pred ceeEEEEcC-CCCEEEEEEeCCCCCC---HHHHHHHHHHHHHHHhcCC
Confidence 579998775 7899999987643332 4567889988888854333
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=94.73 E-value=0.048 Score=60.69 Aligned_cols=60 Identities=10% Similarity=0.194 Sum_probs=39.3
Q ss_pred EeeeccCCcEEEEEEEEcc-------CCcEEEEEEEecCCCCchhHHHHHHHHHHHHhcC-CCCeeeeeeee
Q 000993 386 LQPLGHGGFGHVVLCKNKL-------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAW 449 (1196)
Q Consensus 386 ~~~LG~G~fG~Vy~a~~~~-------~g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~L~-HpnIV~l~~~~ 449 (1196)
++.|+.|-.-.+|++.... ..+.|.+++.. . ... .....+|..+++.+. +.-..++++++
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~-~~~--~idr~~E~~i~~~ls~~gl~Pkll~~~ 114 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-N-PET--ESHLVAESVIFTLLSERHLGPKLYGIF 114 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-S-CCC--HHHHHHHHHHHHHHHHTTSSSCEEEEE
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-C-cch--hhHHHHHHHHHHHHHhCCCCCeEEEEc
Confidence 4678889999999998753 24567777764 2 221 234568999998884 43334666554
|
| >d1v95a_ c.51.1.1 (A:) Nuclear receptor coactivator 5 (KIAA1637) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Anticodon-binding domain-like superfamily: Class II aaRS ABD-related family: Anticodon-binding domain of Class II aaRS domain: Nuclear receptor coactivator 5 (KIAA1637) species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.70 E-value=0.1 Score=47.11 Aligned_cols=97 Identities=7% Similarity=0.028 Sum_probs=77.7
Q ss_pred CCceEEEEEcCCCchHHHHHHHHHHHHHcCCeEEEeeC-CCCCHHHHHHHHHHCCCcEEEEEcCCcccCCeEEEEEcCCC
Q 000993 1089 AGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPV-PDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVK 1167 (1196)
Q Consensus 1089 ~~~~vlv~~~~~~~~~~~a~~~a~~Lr~~Gi~vel~~~-~~~~l~k~~~~A~~~g~~~~iiig~~E~~~g~v~vk~l~~g 1167 (1196)
.|.|.-|+..+ .+...+|-.+-..||+.|+.|++.+- ++-.+.+.+....+.|.+|+|++..+...-..+||.-|-.-
T Consensus 7 ~P~DCeIivvn-k~~~~YAe~Ie~rL~~~Gl~vd~lf~n~dv~l~~aL~~vs~~G~~faIlVt~qn~~~~S~TvnIL~g~ 85 (130)
T d1v95a_ 7 GPVDCSVIVVN-KQTKDYAESVGRKVRDLGMVVDLIFLNTEVSLSQALEDVSRGGSPFAIVITQQHQIHRSCTVNIMFGT 85 (130)
T ss_dssp CCCTEEEEESS-SGGGHHHHHHHHHHHTTTCCEEEEECTTSSCHHHHHHHHHHHTCSEEEEECHHHHHHTEEEEEECSSS
T ss_pred CCcceEEEEEC-CccchHHHHHHHHHHhcCCEEEEEecCCcccHHHHHHHHHhCCCceEEEEeccchhhcceEeeeecCC
Confidence 34555566664 56788999999999999999997664 34579999999999999999999999888888999877553
Q ss_pred --cccccchHHHHHHHHHHHH
Q 000993 1168 --KEKEVQRESLVRFLLDAIA 1186 (1196)
Q Consensus 1168 --~q~~v~~~el~~~l~~~l~ 1186 (1196)
+....|+++.+..+.+...
T Consensus 86 pqEHRNMPleDAl~lva~~f~ 106 (130)
T d1v95a_ 86 PQEHRNMPQADAMVLVARNYE 106 (130)
T ss_dssp CCEEEEEEHHHHHHHHHHHHH
T ss_pred hHHHHCCCHHHHHHHHHHHHH
Confidence 3457889998888766554
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=92.49 E-value=0.16 Score=54.19 Aligned_cols=30 Identities=37% Similarity=0.513 Sum_probs=27.0
Q ss_pred CCCcccCCCcCcEEecCCCCeEEeccCcch
Q 000993 538 QGIIHRDLTPNNIFFDARNDIKIGDFGLAK 567 (1196)
Q Consensus 538 ~gIiHrDLKp~NILld~~~~vKL~DFGlA~ 567 (1196)
.|+||+|+.++||+++.+...-|.||+.|.
T Consensus 183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 183 AGVIHADLFQDNVFFLGDELSGLIDFYFAC 212 (316)
T ss_dssp EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred cccccCCcchhhhhcccccceeEecccccc
Confidence 379999999999999988777899999986
|
| >d1jjcb5 d.104.1.1 (B:475-681) Phenyl-tRNA synthetase (PheRS) beta subunit, PheT, central domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Phenyl-tRNA synthetase (PheRS) beta subunit, PheT, central domain species: Thermus thermophilus [TaxId: 274]
Probab=91.59 E-value=0.54 Score=47.04 Aligned_cols=120 Identities=13% Similarity=0.043 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHcCCccccccceeecC---CCcccccceEEEeecCCceE-eecCCCcHHHHHHHHhCC----CCceeEE
Q 000993 757 YVVQVTKEMFRQHCAKHLEIEPMYLLG---DCPQFKRNTVKLLTHGGDLL-ELSHELRLPFIRWAISNQ----KSSFKRY 828 (1196)
Q Consensus 757 ~I~~~i~~~f~~~Gy~~I~tP~~~~~~---~~~~~~~~my~f~D~~G~~l-aLRPD~T~~iaR~~a~~~----~~P~r~~ 828 (1196)
..++++++.+...||.||.|-+|.-.. .... .+...++..+-.+++ +||+.+.+++.+.++.|. ...+|+|
T Consensus 19 ~~~~~ir~~L~~~Gf~Ev~tysf~s~~~~~~~~~-~~~~i~l~NPis~e~~~lR~sLlpgLL~~~~~N~~r~~~~~~~lF 97 (207)
T d1jjcb5 19 RKEQRLREVLSGLGFQEVYTYSFMDPEDARRFRL-DPPRLLLLNPLAPEKAALRTHLFPGLVRVLKENLDLDRPERALLF 97 (207)
T ss_dssp HHHHHHHHHHHHHTCEECCCCSEECTTHHHHTTC-CCCSCEESSCSSGGGSEECSCSHHHHHHHHHHHHHHSCCSEEEEE
T ss_pred HHHHHHHHHHHHCCcchhcCCCcCCHHHHHhhcC-CCCcEEEeCCcchhhhhhhhhcchHHHHHHHhCcccccccceeeE
Confidence 456778999999999999999982211 1111 233457777655444 799999999999888742 2358999
Q ss_pred EecCeeecCCCCCCCcceeEeEEEEeCCC-------CccchH-HHHHHHHHHHHHcCCCCceEEEe
Q 000993 829 EISSVYRRAIGHSPPNRYLQGDFDIIGGA-------SALTEA-EVLKVTMDIVTRFFHAESCDIHL 886 (1196)
Q Consensus 829 Y~G~VfR~e~~~~~~~ef~Q~GvEiiG~~-------~~~aDa-EvI~la~~~L~~lgi~~~~~i~L 886 (1196)
.+|+||+.. .+-..+++ +.|.. ....|. ++-.++..++..+|+. +.+.-
T Consensus 98 EiG~vf~~~------~~~~~~~~-~~g~~~~~~~~~~~~~df~~~Kg~v~~ll~~lg~~--~~~~~ 154 (207)
T d1jjcb5 98 EVGRVFRER------EETHLAGL-LFGEGVGLPWAKERLSGYFLLKGYLEALFARLGLA--FRVEA 154 (207)
T ss_dssp EEEEEESSS------EEEEEEEE-EEESCBSCTTSSCCBCHHHHHHHHHHHHHHHHTCC--EEEEE
T ss_pred eeeeeeecc------ccccchhh-hhhcccccccccccchhHHHHHHHHHHHHHhhhcc--ccccc
Confidence 999999752 12233333 33321 112343 5666777777888874 44443
|