Citrus Sinensis ID: 001236
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1117 | 2.2.26 [Sep-21-2011] | |||||||
| Q15751 | 4861 | Probable E3 ubiquitin-pro | yes | no | 0.321 | 0.073 | 0.334 | 1e-49 | |
| Q9FN03 | 440 | Ultraviolet-B receptor UV | no | no | 0.283 | 0.720 | 0.352 | 2e-44 | |
| Q9VR91 | 4912 | Probable E3 ubiquitin-pro | yes | no | 0.290 | 0.066 | 0.345 | 2e-44 | |
| O95714 | 4834 | E3 ubiquitin-protein liga | no | no | 0.304 | 0.070 | 0.330 | 2e-43 | |
| Q4U2R1 | 4836 | E3 ubiquitin-protein liga | no | no | 0.304 | 0.070 | 0.330 | 3e-43 | |
| Q5GLZ8 | 1057 | Probable E3 ubiquitin-pro | no | no | 0.301 | 0.318 | 0.307 | 4e-38 | |
| Q5PQN1 | 1057 | Probable E3 ubiquitin-pro | no | no | 0.301 | 0.318 | 0.302 | 4e-37 | |
| Q6PAV2 | 1057 | Probable E3 ubiquitin-pro | no | no | 0.301 | 0.318 | 0.302 | 4e-37 | |
| Q15034 | 1050 | Probable E3 ubiquitin-pro | no | no | 0.278 | 0.296 | 0.323 | 2e-34 | |
| F2Z461 | 1003 | E3 ISG15--protein ligase | no | no | 0.296 | 0.330 | 0.286 | 8e-30 |
| >sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1 PE=1 SV=2 | Back alignment and function desciption |
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Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/406 (33%), Positives = 198/406 (48%), Gaps = 47/406 (11%)
Query: 231 SAPDDCDALG--DVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHI 288
S P+D G DVY+WG + +AG + V P + +
Sbjct: 3986 SRPEDWHLGGKCDVYLWGAGRHGQLAEAGRNVMV-------------PAAAPSFSQAQQV 4032
Query: 289 ACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVT-----CG 343
CG ++ G V GE S GRLG G D+ H+L ++ VT CG
Sbjct: 4033 ICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---HVLTVISALQGFVVTQLVTSCG 4089
Query: 344 -EFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHT 402
+ H+ A+T +GE+++WGDG + G LGHG P++I L+G +V ++CG H+
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHS 4146
Query: 403 ALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIV 462
A++TS G+LFTFG+G +G LG G+ N P V +L G + VACG+ HT AV
Sbjct: 4147 AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----- 4201
Query: 463 TQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTT 522
S ++ +GDGD +LG G+ + P + L KVACG +V LT
Sbjct: 4202 -----SADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTK 4256
Query: 523 SGHVFTMGSTVY-----GQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNE 577
GHV+T G G+ N N ++P LAG +E++A GA H L S +
Sbjct: 4257 DGHVYTFGQDRLIGLPEGRARNHNRPQQIPV-----LAGVIIEDVAVGAEHTLALASNGD 4311
Query: 578 VYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
VY WG + G+LG G + P LV L+ ++V+ I+ G +SAA
Sbjct: 4312 VYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAA 4357
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Involved in membrane trafficking via some guanine nucleotide exchange factor (GEF) activity and its ability to bind clathrin. Acts as a GEF for Arf and Rab, by exchanging bound GDP for free GTP. Binds phosphatidylinositol 4,5-bisphosphate, which is required for GEF activity. May also act as a E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Homo sapiens (taxid: 9606) EC: 6EC: .EC: 3EC: .EC: 2EC: .EC: - |
| >sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster GN=HERC2 PE=1 SV=3 | Back alignment and function description |
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| >sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus GN=Herc4 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3 PE=1 SV=1 | Back alignment and function description |
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| >sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1117 | ||||||
| 255570334 | 1114 | Ran GTPase binding protein, putative [Ri | 0.994 | 0.997 | 0.855 | 0.0 | |
| 224062918 | 1114 | predicted protein [Populus trichocarpa] | 0.993 | 0.996 | 0.848 | 0.0 | |
| 225463891 | 1129 | PREDICTED: uncharacterized protein LOC10 | 0.994 | 0.984 | 0.836 | 0.0 | |
| 356534059 | 1120 | PREDICTED: uncharacterized protein LOC10 | 0.990 | 0.987 | 0.808 | 0.0 | |
| 356559685 | 1120 | PREDICTED: uncharacterized protein LOC10 | 0.991 | 0.989 | 0.790 | 0.0 | |
| 356499563 | 1120 | PREDICTED: uncharacterized protein LOC10 | 0.991 | 0.989 | 0.794 | 0.0 | |
| 356576039 | 1098 | PREDICTED: uncharacterized protein LOC10 | 0.972 | 0.989 | 0.808 | 0.0 | |
| 449462158 | 1120 | PREDICTED: uncharacterized protein LOC10 | 0.994 | 0.991 | 0.789 | 0.0 | |
| 357443735 | 1238 | Lateral signaling target protein-like pr | 0.973 | 0.878 | 0.704 | 0.0 | |
| 224085093 | 1061 | predicted protein [Populus trichocarpa] | 0.945 | 0.995 | 0.766 | 0.0 |
| >gi|255570334|ref|XP_002526126.1| Ran GTPase binding protein, putative [Ricinus communis] gi|223534503|gb|EEF36202.1| Ran GTPase binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 1927 bits (4991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 956/1118 (85%), Positives = 1025/1118 (91%), Gaps = 7/1118 (0%)
Query: 1 MADLVSYGNADRDIEQALIALKKGAQLLKYGRKGKPKFYPFRLSNDETSLIWISSSGERS 60
MADLVS+GNA+RDIEQALIALKKGAQLLKYGRKGKPKF PFRLSNDET+LIWISSSGERS
Sbjct: 1 MADLVSFGNAERDIEQALIALKKGAQLLKYGRKGKPKFCPFRLSNDETTLIWISSSGERS 60
Query: 61 LKLASVSKIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEAEVWIAGLK 120
LKLASVSKIIPGQRTAVFQRYLRPEKDYLSFSLIYN+GKRSLDLICKDKVEAEVWIAGLK
Sbjct: 61 LKLASVSKIIPGQRTAVFQRYLRPEKDYLSFSLIYNDGKRSLDLICKDKVEAEVWIAGLK 120
Query: 121 ALISSGQGGRSKIDGWNDGGLYLEDSRDLTSNSASDSSVSLTRDISSPEVSVSLNHPISS 180
ALISSGQGGRSKIDGW+DGGLYL+D RDLTSNSASDSS+S+TR+ISSP++SVS N P S
Sbjct: 121 ALISSGQGGRSKIDGWSDGGLYLDDGRDLTSNSASDSSISVTREISSPDISVSFN-PNIS 179
Query: 181 PTSFQTEGSISVNSERSHVASDNTNMQVKGSGSDVFRVSVSSAPSTSSHGSAPDDCDALG 240
P S + E S NS+RSHVASDNTNMQVKGSGSD FRVSVSSAPSTSSHGSAPDDCDALG
Sbjct: 180 PRSSRPENS--PNSDRSHVASDNTNMQVKGSGSDAFRVSVSSAPSTSSHGSAPDDCDALG 237
Query: 241 DVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTR 300
DVYIWGEVI DN VK GADKN NY+ TRADVLLPRPLESNVVLDVHHIACGVRHAALVTR
Sbjct: 238 DVYIWGEVIYDNAVKIGADKNANYVSTRADVLLPRPLESNVVLDVHHIACGVRHAALVTR 297
Query: 301 QGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWG 360
QGEVFTWGEESGGRLGHGVGKD++QP L+ESL +++VDFV CGEFHTCAVTMAGE+YTWG
Sbjct: 298 QGEVFTWGEESGGRLGHGVGKDVIQPRLVESLAVSTVDFVACGEFHTCAVTMAGEIYTWG 357
Query: 361 DGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFG 420
DGTHNAGLLGHG DVSHWIPKRISGPLEGLQVASVTCGPWHTAL+TSTGQLFTFGDGTFG
Sbjct: 358 DGTHNAGLLGHGNDVSHWIPKRISGPLEGLQVASVTCGPWHTALVTSTGQLFTFGDGTFG 417
Query: 421 VLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDG 480
VLGHGDR+NV+YPREVESLSGLRTIA ACGVWHTAAVVEVIVTQSS+S+SSGKLFTWGDG
Sbjct: 418 VLGHGDRENVAYPREVESLSGLRTIAAACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDG 477
Query: 481 DKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNP 540
DKNRLGHGDKEPRLKPTCVPALIDYNFHK+ACGHSLTVGLTTSGHVF MGSTVYGQLGNP
Sbjct: 478 DKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGHVFAMGSTVYGQLGNP 537
Query: 541 NADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTP 600
ADGKLPCLVEDKL+GESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGD+EDRK P
Sbjct: 538 YADGKLPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDIEDRKAP 597
Query: 601 ALVEALKDRHVKYIACGSNYSAAICLHKWVSSAEQLQCSACRQAFGFTRKRHNCYNCGLV 660
LVEALKDRHVKYIACG+NY+AAICLHK VS AEQ QCS+CRQAFGFTRKRHNCYNCGLV
Sbjct: 598 ILVEALKDRHVKYIACGANYTAAICLHKLVSGAEQSQCSSCRQAFGFTRKRHNCYNCGLV 657
Query: 661 HCHSCSSRKALRAALAPNPGKPYRVCDCCFAKLNKVSEAS--NRRNSLPRLSGENKDRLD 718
HCHSCSSRKA RAALAPNPGKPYRVCD CF KLNKVS+AS NRRNS+PRLSGENKDRLD
Sbjct: 658 HCHSCSSRKATRAALAPNPGKPYRVCDSCFVKLNKVSDASNHNRRNSVPRLSGENKDRLD 717
Query: 719 KSDLKLSKSAMPSNVDLIKQLDCKAAKQGKKADAFSLVRSSQAPSLLQLKDVVLTTAADL 778
K++++LSKS +PSN+DLIKQLD KAAKQGKKAD FSLVRSSQAPSLLQLKDVV ++A DL
Sbjct: 718 KAEIRLSKSTLPSNMDLIKQLDTKAAKQGKKADTFSLVRSSQAPSLLQLKDVVFSSAIDL 777
Query: 779 RRTTPKPILAPSGVSSRSVSPFSRRPSPPRSATPVPTTSGLSFSKSITDSLKKTNELLNQ 838
R PKP+L PSGV+SRSVSPFSRRPSPPRSATPVPTTSGLSFSKS+TDSL+KTNELLNQ
Sbjct: 778 RAKVPKPVLTPSGVNSRSVSPFSRRPSPPRSATPVPTTSGLSFSKSVTDSLRKTNELLNQ 837
Query: 839 EVLKLRAQVESLRQRCEFQELELQKSTKKAQEAMAVAAEESSKAKAAKDVIKSLTAQLKD 898
EV+KLRAQVESL+QRC+FQELELQKS KK QEAMA+AAEESSK+KAAKDVIKSLTAQLKD
Sbjct: 838 EVIKLRAQVESLKQRCDFQELELQKSAKKVQEAMALAAEESSKSKAAKDVIKSLTAQLKD 897
Query: 899 MAERLPPGVYDPENMRPAYIPNGLETNGVHYSDMNGERHSRSDSVSSSILAFPTGVDSVS 958
MAERLPPGV D ENM+PAY+ NGLE NG+HY D NGERHSRSDS+S + LA PTG DS
Sbjct: 898 MAERLPPGVSDSENMKPAYLTNGLEPNGIHYVDANGERHSRSDSISLTSLASPTGNDSTL 957
Query: 959 NNGTGGLSQFLRETTGASGRDDQPVIRLPNGSVGVLANSSCVSESSEGKESMPLQDSENG 1018
+NG G + R++ +GRDD P RL NG G + +S VSE +GKES LQD ENG
Sbjct: 958 SNGAQGPAYSFRDSFPTNGRDDHPDARLSNG--GGVQSSHNVSEGVDGKESRSLQDGENG 1015
Query: 1019 TRPRSPALSVSSHQVEAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAETWW 1078
R R AL+ SS+QVEAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAETWW
Sbjct: 1016 IRSRDSALAASSNQVEAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAETWW 1075
Query: 1079 SENREKVYERYNVRGLDKSSASGQAARRPEGTLSPTSQ 1116
SENREKVYE+YNVRG DKSS SGQAARR EG +S +SQ
Sbjct: 1076 SENREKVYEKYNVRGSDKSSVSGQAARRSEGAMSSSSQ 1113
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224062918|ref|XP_002300931.1| predicted protein [Populus trichocarpa] gi|222842657|gb|EEE80204.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225463891|ref|XP_002264093.1| PREDICTED: uncharacterized protein LOC100246114 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356534059|ref|XP_003535575.1| PREDICTED: uncharacterized protein LOC100783270 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356559685|ref|XP_003548128.1| PREDICTED: uncharacterized protein LOC100813700 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356499563|ref|XP_003518608.1| PREDICTED: uncharacterized protein LOC100805364 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356576039|ref|XP_003556142.1| PREDICTED: uncharacterized protein LOC100811999 [Glycine max] | Back alignment and taxonomy information |
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| >gi|449462158|ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222741 [Cucumis sativus] gi|449506967|ref|XP_004162897.1| PREDICTED: uncharacterized LOC101222741 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|357443735|ref|XP_003592145.1| Lateral signaling target protein-like protein [Medicago truncatula] gi|355481193|gb|AES62396.1| Lateral signaling target protein-like protein [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|224085093|ref|XP_002307488.1| predicted protein [Populus trichocarpa] gi|222856937|gb|EEE94484.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1117 | ||||||
| TAIR|locus:2025277 | 1103 | PRAF1 "AT1G76950" [Arabidopsis | 0.976 | 0.989 | 0.678 | 0.0 | |
| TAIR|locus:2165770 | 1073 | AT5G42140 "AT5G42140" [Arabido | 0.888 | 0.925 | 0.693 | 0.0 | |
| TAIR|locus:2086253 | 1045 | AT3G23270 "AT3G23270" [Arabido | 0.519 | 0.555 | 0.608 | 3.3e-278 | |
| TAIR|locus:505006603 | 1075 | AT5G12350 "AT5G12350" [Arabido | 0.516 | 0.536 | 0.585 | 2.1e-276 | |
| TAIR|locus:2009739 | 1006 | AT1G65920 [Arabidopsis thalian | 0.611 | 0.678 | 0.458 | 7.1e-178 | |
| TAIR|locus:2079147 | 954 | AT3G47660 "AT3G47660" [Arabido | 0.605 | 0.708 | 0.483 | 9.2e-178 | |
| TAIR|locus:2163986 | 440 | UVR8 "UVB-RESISTANCE 8" [Arabi | 0.329 | 0.836 | 0.335 | 2.3e-46 | |
| UNIPROTKB|J9NWD8 | 4118 | HERC1 "Uncharacterized protein | 0.322 | 0.087 | 0.337 | 2.5e-43 | |
| UNIPROTKB|Q15751 | 4861 | HERC1 "Probable E3 ubiquitin-p | 0.322 | 0.074 | 0.337 | 2.9e-43 | |
| UNIPROTKB|E2QYQ5 | 4863 | HERC1 "Uncharacterized protein | 0.322 | 0.074 | 0.337 | 3.7e-43 |
| TAIR|locus:2025277 PRAF1 "AT1G76950" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 3841 (1357.2 bits), Expect = 0., P = 0.
Identities = 755/1113 (67%), Positives = 853/1113 (76%)
Query: 1 MADLVSYGNADRDIEQALIALKKGAQLLKYGRKGKPKFYPFRLSNDETSLIWISSSGERS 60
MADLV+Y NAD ++EQALI LKKG QLLKYGRKGKPKFYPFRLS+DE SLIWISSSGE+
Sbjct: 1 MADLVTYSNADHNLEQALITLKKGTQLLKYGRKGKPKFYPFRLSSDEKSLIWISSSGEKR 60
Query: 61 LKLASVSKIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEAEVWIAGLK 120
LKLASVSKI+PGQRTAVFQRYLRPEKDYLSFSL+YN K+SLDLICKDKVEAE+WI GLK
Sbjct: 61 LKLASVSKIVPGQRTAVFQRYLRPEKDYLSFSLLYNGKKKSLDLICKDKVEAEIWIGGLK 120
Query: 121 ALISSGQGGRSKIDGWNDGGLYLEDSRDLTSNSASDSSVSLTRDISSPEVSVSLNHPISS 180
LIS+GQGGRSKIDGW+ GGL ++ SR+LTS+S S SS S +R SSP +++ PI+S
Sbjct: 121 TLISTGQGGRSKIDGWSGGGLSVDASRELTSSSPSSSSASASRGHSSPGTPFNID-PITS 179
Query: 181 PTSFQTEGSISVNSERSHVASDNTNMQVKGSGSDVFRVXXXXXXXXXXXXXAPDDCDALG 240
P S + E +SE+SHVA DN NMQ K SGSD FRV A DD DALG
Sbjct: 180 PKSAEPEVP-PTDSEKSHVALDNKNMQTKVSGSDGFRVSVSSAQSSSSHGSAADDSDALG 238
Query: 241 DVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTR 300
DVYIWGEVICDNVVK G DKN +YL TR DVL+P+PLESN+VLDVH IACGVRHAA VTR
Sbjct: 239 DVYIWGEVICDNVVKVGIDKNASYLTTRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTR 298
Query: 301 QGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTS-VDFVTCGEFHTCAVTMAGELYTW 359
QGE+FTWGEESGGRLGHG+GKD+ P L+ESLT TS VDFV CGEFHTCAVT+AGELYTW
Sbjct: 299 QGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVTLAGELYTW 358
Query: 360 GDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTF 419
GDGTHN GLLGHG+D+SHWIPKRI+G LEGL VASV+CGPWHTALITS G+LFTFGDGTF
Sbjct: 359 GDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTF 418
Query: 420 GVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQS-SASVSSGKLFTWG 478
GVLGHGD++ V YPREVESLSGLRTIAV+CGVWHTAAVVE+IVTQS S+SVSSGKLFTWG
Sbjct: 419 GVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWG 478
Query: 479 DGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG 538
DGDKNRLGHGDK+PRLKPTCVPALIDYNFHK+ACGHSLTVGLTTSG VFTMGSTVYGQLG
Sbjct: 479 DGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLG 538
Query: 539 NPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRK 598
N DGKLPCLVEDKLA E VEEI+CGAYHVA LTSRNEVYTWGKGANGRLGHGD+EDRK
Sbjct: 539 NLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRK 598
Query: 599 TPALVEALKDRHVKYIACGSNYSAAICLHKWVSSAEQLQCSACRQAFGFTRKRHNCYNCG 658
P +VEALKDRHVKYIACGSNY+AAICLHKWVS AEQ QCS CR AFGFTRKRHNCYNCG
Sbjct: 599 VPTIVEALKDRHVKYIACGSNYTAAICLHKWVSGAEQSQCSTCRLAFGFTRKRHNCYNCG 658
Query: 659 LVHCHSCSSRKALRAALAPNPGKPYRVCDCCFAKLNKVSEAS--NRRNS-LPRLSGENKD 715
LVHCHSCSS+KA RAALAP+ G+ YRVCD C+ KL+KVSE + NRRNS +PRLSGEN+D
Sbjct: 659 LVHCHSCSSKKAFRAALAPSAGRLYRVCDSCYVKLSKVSEINDTNRRNSAVPRLSGENRD 718
Query: 716 RLDKSDLKLSKSAMPSNVDLIKQLDCKAAKQGKKADAFSLVRSSQAPSLLQLKDVVLTTA 775
RLDKS+++L+K SN+DLIKQLD KAAKQGKK D FSL R+SQ PSLLQLKD V +
Sbjct: 719 RLDKSEIRLAKFGT-SNMDLIKQLDSKAAKQGKKTDTFSLGRNSQLPSLLQLKDAVQSNI 777
Query: 776 ADLRRTTPKPILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLSFSKSITDSLKKTNEL 835
D+RR TPK A GL F I D++KKTNE+
Sbjct: 778 GDMRRATPKLAQAPSGISSRSVSPFSRRSSPPRSATPMPSTSGLYFPVGIADNMKKTNEI 837
Query: 836 LNQEVLKLRAQVESLRQRCEFQELELQKSTXXXXXXXXXXXXXXXXXXXXXDVIKSLTAQ 895
LNQE++KLR QV+SL Q+CEFQE+ELQ S + IKSL AQ
Sbjct: 838 LNQEIVKLRTQVDSLTQKCEFQEVELQNSVKKTQEALALAEEESAKSRAAKEAIKSLIAQ 897
Query: 896 LKDMAERLPPGVYDPENMRPAYIPNGLETNGVHYSDMNGERHXXXXXXXXXILAFPTGVD 955
LKD+AE+LPPG E+++ A + NGL+ NG H+ + NG H ++ D
Sbjct: 898 LKDVAEKLPPG----ESVKLACLQNGLDQNGFHFPEENGF-HPSRSESMTSSISSVAPFD 952
Query: 956 SVSNNGTGGLSQFLRETTGASGRDDQPVIRLPNGSVGVLANSSCVSESSEGKESMPLQDS 1015
N + Q ++T AS R+ P S ++ S +SE E P Q
Sbjct: 953 FAFANASWSNLQSPKQTPRASERNSNAYPADPRLS----SSGSVISERIE-----PFQFQ 1003
Query: 1016 ENGTRPRSPALSVSSHQVEAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAE 1075
N S +++QVEAEWIEQYEPGVYITLVAL DGTRDL+RVRFSRRRFGEHQAE
Sbjct: 1004 NNSDNGSSQTGVNNTNQVEAEWIEQYEPGVYITLVALHDGTRDLRRVRFSRRRFGEHQAE 1063
Query: 1076 TWWSENREKVYERYNVRGLDKSSASGQAARRPE 1108
TWWSENREKVYE+YNVR +KS+AS R E
Sbjct: 1064 TWWSENREKVYEKYNVRVSEKSTASQTHRDRDE 1096
|
|
| TAIR|locus:2165770 AT5G42140 "AT5G42140" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2086253 AT3G23270 "AT3G23270" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:505006603 AT5G12350 "AT5G12350" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2009739 AT1G65920 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2079147 AT3G47660 "AT3G47660" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2163986 UVR8 "UVB-RESISTANCE 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|J9NWD8 HERC1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q15751 HERC1 "Probable E3 ubiquitin-protein ligase HERC1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2QYQ5 HERC1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | estExt_Genewise1_v1.C_LG_II2421 | hypothetical protein (1114 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1117 | |||
| cd13365 | 115 | cd13365, PH_PLC_plant-like, Plant-like Phospholipa | 4e-48 | |
| pfam08381 | 59 | pfam08381, BRX, Transcription factor regulating ro | 2e-35 | |
| COG5184 | 476 | COG5184, ATS1, Alpha-tubulin suppressor and relate | 1e-28 | |
| cd01248 | 108 | cd01248, PH_PLC_ELMO1, Phospholipase C and Engulfm | 5e-27 | |
| COG5184 | 476 | COG5184, ATS1, Alpha-tubulin suppressor and relate | 1e-24 | |
| COG5184 | 476 | COG5184, ATS1, Alpha-tubulin suppressor and relate | 3e-21 | |
| pfam01363 | 68 | pfam01363, FYVE, FYVE zinc finger | 8e-21 | |
| smart00064 | 68 | smart00064, FYVE, Protein present in Fab1, YOTB, V | 3e-20 | |
| COG5184 | 476 | COG5184, ATS1, Alpha-tubulin suppressor and relate | 4e-20 | |
| cd00065 | 57 | cd00065, FYVE, FYVE domain; Zinc-binding domain; t | 6e-17 | |
| pfam00415 | 50 | pfam00415, RCC1, Regulator of chromosome condensat | 2e-14 | |
| pfam00415 | 50 | pfam00415, RCC1, Regulator of chromosome condensat | 2e-14 | |
| pfam13713 | 39 | pfam13713, BRX_N, Transcription factor BRX N-termi | 6e-13 | |
| pfam00415 | 50 | pfam00415, RCC1, Regulator of chromosome condensat | 4e-11 | |
| pfam00415 | 50 | pfam00415, RCC1, Regulator of chromosome condensat | 8e-10 | |
| cd13364 | 108 | cd13364, PH_PLC_eta, Phospholipase C-eta (PLC-eta) | 6e-08 | |
| pfam00415 | 50 | pfam00415, RCC1, Regulator of chromosome condensat | 9e-08 | |
| pfam00415 | 50 | pfam00415, RCC1, Regulator of chromosome condensat | 2e-07 | |
| cd13363 | 117 | cd13363, PH_PLC_delta, Phospholipase C-delta (PLC- | 5e-07 | |
| pfam13540 | 30 | pfam13540, RCC1_2, Regulator of chromosome condens | 8e-05 | |
| pfam13540 | 30 | pfam13540, RCC1_2, Regulator of chromosome condens | 4e-04 | |
| pfam13540 | 30 | pfam13540, RCC1_2, Regulator of chromosome condens | 7e-04 | |
| pfam13540 | 30 | pfam13540, RCC1_2, Regulator of chromosome condens | 0.003 |
| >gnl|CDD|241519 cd13365, PH_PLC_plant-like, Plant-like Phospholipase C (PLC) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
Score = 166 bits (422), Expect = 4e-48
Identities = 63/115 (54%), Positives = 83/115 (72%), Gaps = 2/115 (1%)
Query: 12 RDIEQALIALKKGAQLLKYGRKGKPKFYPFRLSNDETSLIWISSSG--ERSLKLASVSKI 69
RD+E+A+ LK G+ LLKYGR+GKP F FRLS DE +L W S E+ ++L+SVS+I
Sbjct: 1 RDVEEAITQLKIGSNLLKYGRRGKPHFRYFRLSPDELTLYWSSPKKGSEKRVRLSSVSRI 60
Query: 70 IPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEAEVWIAGLKALIS 124
IPGQRT VF+R P + SFS+IY +G+RSLDL CKD+ E + W GL+AL+S
Sbjct: 61 IPGQRTVVFERPPPPGLEEQSFSIIYADGERSLDLTCKDRQEFDTWFTGLRALLS 115
|
PLC-gamma (PLCgamma) was the second class of PLC discovered. PLC-gamma consists of an N-terminal PH domain, a EF hand domain, a catalytic domain split into X and Y halves internal to which is a PH domain split by two SH2 domains and a single SH3 domain, and a C-terminal C2 domain. PLCs (EC 3.1.4.3) play a role in the initiation of cellular activation, proliferation, differentiation and apoptosis. They are central to inositol lipid signalling pathways, facilitating intracellular Ca2+ release and protein kinase C (PKC) activation. Specificaly, PLCs catalyze the cleavage of phosphatidylinositol-4,5-bisphosphate (PIP2) and result in the release of 1,2-diacylglycerol (DAG) and inositol 1,4,5-triphosphate (IP3). These products trigger the activation of protein kinase C (PKC) and the release of Ca2+ from intracellular stores. There are fourteen kinds of mammalian phospholipase C proteins which are are classified into six isotypes (beta, gamma, delta, epsilon, zeta, eta). This cd contains PLC members from fungi and plants. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 115 |
| >gnl|CDD|203924 pfam08381, BRX, Transcription factor regulating root and shoot growth via Pin3 | Back alignment and domain information |
|---|
| >gnl|CDD|227511 COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|241279 cd01248, PH_PLC_ELMO1, Phospholipase C and Engulfment and cell motility protein 1 pleckstrin homology domain | Back alignment and domain information |
|---|
| >gnl|CDD|227511 COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|227511 COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|216454 pfam01363, FYVE, FYVE zinc finger | Back alignment and domain information |
|---|
| >gnl|CDD|214499 smart00064, FYVE, Protein present in Fab1, YOTB, Vac1, and EEA1 | Back alignment and domain information |
|---|
| >gnl|CDD|227511 COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|238022 cd00065, FYVE, FYVE domain; Zinc-binding domain; targets proteins to membrane lipids via interaction with phosphatidylinositol-3-phosphate, PI3P; present in Fab1, YOTB, Vac1, and EEA1; | Back alignment and domain information |
|---|
| >gnl|CDD|201217 pfam00415, RCC1, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|201217 pfam00415, RCC1, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|205888 pfam13713, BRX_N, Transcription factor BRX N-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|201217 pfam00415, RCC1, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|201217 pfam00415, RCC1, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|241518 cd13364, PH_PLC_eta, Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|201217 pfam00415, RCC1, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|201217 pfam00415, RCC1, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|241517 cd13363, PH_PLC_delta, Phospholipase C-delta (PLC-delta) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|205718 pfam13540, RCC1_2, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|205718 pfam13540, RCC1_2, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|205718 pfam13540, RCC1_2, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|205718 pfam13540, RCC1_2, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1117 | |||
| COG5184 | 476 | ATS1 Alpha-tubulin suppressor and related RCC1 dom | 100.0 | |
| COG5184 | 476 | ATS1 Alpha-tubulin suppressor and related RCC1 dom | 100.0 | |
| KOG1427 | 443 | consensus Uncharacterized conserved protein, conta | 100.0 | |
| KOG1427 | 443 | consensus Uncharacterized conserved protein, conta | 100.0 | |
| PF08381 | 59 | BRX: Transcription factor regulating root and shoo | 99.97 | |
| KOG0783 | 1267 | consensus Uncharacterized conserved protein, conta | 99.93 | |
| KOG0783 | 1267 | consensus Uncharacterized conserved protein, conta | 99.91 | |
| KOG1428 | 3738 | consensus Inhibitor of type V adenylyl cyclases/Ne | 99.85 | |
| KOG1428 | 3738 | consensus Inhibitor of type V adenylyl cyclases/Ne | 99.82 | |
| cd01248 | 115 | PH_PLC Phospholipase C (PLC) pleckstrin homology ( | 99.82 | |
| PF12814 | 123 | Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin | 99.7 | |
| KOG0169 | 746 | consensus Phosphoinositide-specific phospholipase | 99.37 | |
| PF13713 | 39 | BRX_N: Transcription factor BRX N-terminal domain | 99.29 | |
| KOG1264 | 1267 | consensus Phospholipase C [Lipid transport and met | 99.22 | |
| PF00415 | 51 | RCC1: Regulator of chromosome condensation (RCC1) | 99.07 | |
| PF01363 | 69 | FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc f | 99.06 | |
| KOG0941 | 850 | consensus E3 ubiquitin protein ligase [Posttransla | 99.0 | |
| KOG1818 | 634 | consensus Membrane trafficking and cell signaling | 98.99 | |
| PF00415 | 51 | RCC1: Regulator of chromosome condensation (RCC1) | 98.93 | |
| smart00064 | 68 | FYVE Protein present in Fab1, YOTB, Vac1, and EEA1 | 98.88 | |
| KOG2999 | 713 | consensus Regulator of Rac1, required for phagocyt | 98.84 | |
| KOG0941 | 850 | consensus E3 ubiquitin protein ligase [Posttransla | 98.79 | |
| KOG1729 | 288 | consensus FYVE finger containing protein [General | 98.77 | |
| PTZ00303 | 1374 | phosphatidylinositol kinase; Provisional | 98.71 | |
| PF13540 | 30 | RCC1_2: Regulator of chromosome condensation (RCC1 | 98.63 | |
| PF13540 | 30 | RCC1_2: Regulator of chromosome condensation (RCC1 | 98.62 | |
| KOG1819 | 990 | consensus FYVE finger-containing proteins [General | 98.59 | |
| cd00065 | 57 | FYVE FYVE domain; Zinc-binding domain; targets pro | 98.36 | |
| KOG1842 | 505 | consensus FYVE finger-containing protein [General | 97.59 | |
| KOG1841 | 1287 | consensus Smad anchor for receptor activation [Def | 97.55 | |
| cd01244 | 98 | PH_RasGAP_CG9209 RAS_GTPase activating protein (GA | 97.53 | |
| KOG1409 | 404 | consensus Uncharacterized conserved protein, conta | 97.38 | |
| cd01235 | 101 | PH_SETbf Set binding factor Pleckstrin Homology (P | 97.24 | |
| cd01238 | 106 | PH_Tec Tec pleckstrin homology (PH) domain. Tec pl | 97.16 | |
| cd01266 | 108 | PH_Gab Gab (Grb2-associated binder) pleckstrin hom | 96.91 | |
| smart00233 | 102 | PH Pleckstrin homology domain. Domain commonly fou | 96.88 | |
| cd01236 | 104 | PH_outspread Outspread Pleckstrin homology (PH) do | 96.83 | |
| PF00169 | 104 | PH: PH domain; InterPro: IPR001849 The pleckstrin | 96.81 | |
| KOG1843 | 473 | consensus Uncharacterized conserved protein [Funct | 96.8 | |
| cd01265 | 95 | PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain | 96.75 | |
| cd01264 | 101 | PH_melted Melted pleckstrin homology (PH) domain. | 96.65 | |
| cd01233 | 100 | Unc104 Unc-104 pleckstrin homology (PH) domain. Un | 96.56 | |
| cd00821 | 96 | PH Pleckstrin homology (PH) domain. Pleckstrin hom | 96.39 | |
| cd01219 | 101 | PH_FGD FGD (faciogenital dysplasia protein) plecks | 96.33 | |
| cd01247 | 91 | PH_GPBP Goodpasture antigen binding protein (GPBP) | 96.26 | |
| cd01220 | 99 | PH_CDEP Chondrocyte-derived ezrin-like domain cont | 96.19 | |
| cd01251 | 103 | PH_centaurin_alpha Centaurin alpha Pleckstrin homo | 95.55 | |
| cd01250 | 94 | PH_centaurin Centaurin Pleckstrin homology (PH) do | 95.33 | |
| cd00900 | 99 | PH-like Pleckstrin homology-like domain. Pleckstri | 95.22 | |
| cd01246 | 91 | PH_oxysterol_bp Oxysterol binding protein (OSBP) P | 95.1 | |
| cd01256 | 110 | PH_dynamin Dynamin pleckstrin homology (PH) domain | 95.01 | |
| KOG3669 | 705 | consensus Uncharacterized conserved protein, conta | 94.91 | |
| KOG4424 | 623 | consensus Predicted Rho/Rac guanine nucleotide exc | 94.76 | |
| cd01257 | 101 | PH_IRS Insulin receptor substrate (IRS) pleckstrin | 94.71 | |
| PF11725 | 1774 | AvrE: Pathogenicity factor; InterPro: IPR021085 Th | 94.5 | |
| cd01241 | 102 | PH_Akt Akt pleckstrin homology (PH) domain. Akt pl | 94.45 | |
| PF15409 | 89 | PH_8: Pleckstrin homology domain | 94.35 | |
| cd01252 | 125 | PH_cytohesin Cytohesin Pleckstrin homology (PH) do | 94.14 | |
| KOG1265 | 1189 | consensus Phospholipase C [Lipid transport and met | 93.39 | |
| cd01260 | 96 | PH_CNK Connector enhancer of KSR (Kinase suppresso | 93.24 | |
| KOG1811 | 1141 | consensus Predicted Zn2+-binding protein, contains | 91.37 | |
| PF15413 | 112 | PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FE | 91.11 | |
| cd01261 | 112 | PH_SOS Son of Sevenless (SOS) Pleckstrin homology | 91.1 | |
| cd01218 | 104 | PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain | 89.67 | |
| cd01245 | 98 | PH_RasGAP_CG5898 RAS GTPase-activating protein (GA | 89.24 | |
| cd01254 | 121 | PH_PLD Phospholipase D (PLD) pleckstrin homology ( | 88.39 | |
| KOG3669 | 705 | consensus Uncharacterized conserved protein, conta | 88.14 | |
| cd01242 | 112 | PH_ROK Rok (Rho- associated kinase) pleckstrin hom | 87.43 | |
| KOG2059 | 800 | consensus Ras GTPase-activating protein [Signal tr | 87.3 | |
| PLN02153 | 341 | epithiospecifier protein | 85.9 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 85.13 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 84.92 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 84.83 | |
| PF03904 | 230 | DUF334: Domain of unknown function (DUF334); Inter | 84.73 | |
| PF03962 | 188 | Mnd1: Mnd1 family; InterPro: IPR005647 This family | 84.68 | |
| PF08458 | 110 | PH_2: Plant pleckstrin homology-like region; Inter | 84.35 | |
| PF12325 | 120 | TMF_TATA_bd: TATA element modulatory factor 1 TATA | 84.28 | |
| PRK09973 | 85 | putative outer membrane lipoprotein; Provisional | 84.0 | |
| KOG0943 | 3015 | consensus Predicted ubiquitin-protein ligase/hyper | 83.67 | |
| cd01237 | 106 | Unc112 Unc-112 pleckstrin homology (PH) domain. Un | 83.41 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 83.36 | |
| PRK15396 | 78 | murein lipoprotein; Provisional | 83.27 | |
| KOG2391 | 365 | consensus Vacuolar sorting protein/ubiquitin recep | 82.54 | |
| cd01232 | 114 | PH_TRIO Trio pleckstrin homology (PH) domain. Trio | 82.29 | |
| KOG0230 | 1598 | consensus Phosphatidylinositol-4-phosphate 5-kinas | 82.26 | |
| PF02318 | 118 | FYVE_2: FYVE-type zinc finger; InterPro: IPR003315 | 81.82 | |
| COG3074 | 79 | Uncharacterized protein conserved in bacteria [Fun | 80.59 | |
| PF02403 | 108 | Seryl_tRNA_N: Seryl-tRNA synthetase N-terminal dom | 80.48 |
| >COG5184 ATS1 Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-45 Score=411.75 Aligned_cols=362 Identities=25% Similarity=0.457 Sum_probs=289.6
Q ss_pred ccCCCCCEEEecCCCCCCcccCCCCCCccccCcccccccccccccC--CCCCEEEEEecCceEEEEEcCCcEEEEeCCCC
Q 001236 235 DCDALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESN--VVLDVHHIACGVRHAALVTRQGEVFTWGEESG 312 (1117)
Q Consensus 235 ~~~s~G~Vy~WG~n~~~g~LG~G~~~~~~~~~~~~~~~~P~~l~s~--~~~~I~~Ia~G~~Hs~~LT~dG~VyswG~N~~ 312 (1117)
.....++||+||.| ..++||.|.+.. .+..|...... ....|.+++||+.|+++|++||.||+||.|..
T Consensus 63 ~~~~~~~v~~~Gsn-~~~eLGlg~de~--------~~~~P~~~~~~~~d~~~i~~~acGg~hsl~ld~Dg~lyswG~N~~ 133 (476)
T COG5184 63 LLVKMASVYSWGSN-GMNELGLGNDET--------KVDRPQLNPFGRIDKASIIKIACGGNHSLGLDHDGNLYSWGDNDD 133 (476)
T ss_pred hhhheeeeEEEecC-cceeeccCCchh--------cccCceecCcccccceeeEEeecCCceEEeecCCCCEEEeccCcc
Confidence 45667899999998 679999998531 13444443333 45789999999999999999999999999999
Q ss_pred CccCCCCC----------------CceeccEEecc----CCCCCeEEEEecCCeEEEEEcCCcEEEEcCCCCCCCccCCC
Q 001236 313 GRLGHGVG----------------KDIVQPHLLES----LTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHG 372 (1117)
Q Consensus 313 GQLG~g~~----------------~~~~~P~~V~~----l~~~~I~~Va~G~~hs~aLT~dG~VysWG~n~~~~GqLG~g 372 (1117)
|+||.... .....|..|.. ....+|++++||++++++|+++|+||.||.+ ..+.++.+
T Consensus 134 G~Lgr~~~~~~~~~~~~~~~~~~~~~~~tP~~v~~~s~~~s~~~vv~l~cg~e~svil~~~G~V~~~gt~--r~~e~~~g 211 (476)
T COG5184 134 GALGRDIHKDICDQNNDIIDFDDYELESTPFKVPGGSSAKSHLRVVKLACGWEISVILTADGRVYSWGTF--RCGELGQG 211 (476)
T ss_pred cccccccccccccccccccccchhhcccCCceeeccccccCChheEEeecCCceEEEEccCCcEEEecCc--cccccccc
Confidence 99998761 12457777776 2234799999999999999999999999998 44555555
Q ss_pred C--Ccc----eeeeeeecCCCCCCcEEEEEecCCeeEEEccCCcEEEEeCCCCCCcCCCCCCCcccceeecccccc-eEE
Q 001236 373 T--DVS----HWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGL-RTI 445 (1117)
Q Consensus 373 ~--~~~----~~~P~~V~~~l~~~~Iv~Va~G~~HtlaLt~dG~Vy~wG~N~~GQLG~g~~~~~~~P~~V~~l~~~-kI~ 445 (1117)
. ... .++|.+++ ...|+++++|.+|.++|+++|+||+||+|.+||||....+....+..+..+... .|.
T Consensus 212 ~~~~s~k~~~~~~p~~v~----~~~i~qla~G~dh~i~lt~~G~vy~~Gs~qkgqlG~~~~e~~~~~~lv~~~f~i~~i~ 287 (476)
T COG5184 212 SYKNSQKTSIQFTPLKVP----KKAIVQLAAGADHLIALTNEGKVYGWGSNQKGQLGRPTSERLKLVVLVGDPFAIRNIK 287 (476)
T ss_pred cccccccceeeeeeeecC----chheeeeccCCceEEEEecCCcEEEecCCcccccCCchhhhcccccccCChhhhhhhh
Confidence 2 222 24454443 457999999999999999999999999999999999887777666666544333 368
Q ss_pred EEeeCCceEEEEEEeeecccccccCCceEEEecCCCCCCCCCCCC----CCcccceeecccCCCCEEEEEecCcEEEEEe
Q 001236 446 AVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK----EPRLKPTCVPALIDYNFHKVACGHSLTVGLT 521 (1117)
Q Consensus 446 ~VacG~~Ht~aL~e~~~~~~~~~t~~G~Ly~WG~n~~GQLG~g~~----~~~~~P~~V~~l~~~~I~~Ia~G~~htlaLT 521 (1117)
.|+||.+|++|| ..+|++|+||.|.+||||.+.. .....|.....+....|..|++|..|+++|.
T Consensus 288 ~vacG~~h~~al-----------~~~G~i~a~G~n~fgqlg~~~~~~~~a~~tk~~~~~~~~~~~i~~is~ge~H~l~L~ 356 (476)
T COG5184 288 YVACGKDHSLAL-----------DEDGEIYAWGVNIFGQLGAGSDGEIGALTTKPNYKQLLSGVTICSISAGESHSLILR 356 (476)
T ss_pred hcccCcceEEEE-----------cCCCeEEEeccchhcccccCcccccceeeccccccccCCCceEEEEecCcceEEEEe
Confidence 899999999999 5699999999999999999822 1235566666677778999999999999999
Q ss_pred cCCeEEEEeCCCCCCCCCCCCCC---CcceeeecccCCCCeEEEEeCCCcceeeecCCeEEEEeCCCCCCCCCCCCC-CC
Q 001236 522 TSGHVFTMGSTVYGQLGNPNADG---KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVE-DR 597 (1117)
Q Consensus 522 ~dG~Vy~wGsN~~GQLG~~~~~~---~~P~~v~~~l~~~~V~~Is~G~~Ht~aLT~dG~Vy~WG~n~~GQLG~G~~~-~~ 597 (1117)
.+|.||+||.+..||||.+.... ..|..+. ...++++|+||.+|+++.+.+|+||.||.|++|+||.|+.. +.
T Consensus 357 ~~G~l~a~Gr~~~~qlg~~~~~~~~~~~~~~ls---~~~~~~~v~~gt~~~~~~t~~gsvy~wG~ge~gnlG~g~~~~~~ 433 (476)
T COG5184 357 KDGTLYAFGRGDRGQLGIQEEITIDVSTPTKLS---VAIKLEQVACGTHHNIARTDDGSVYSWGWGEHGNLGNGPKEADV 433 (476)
T ss_pred cCceEEEecCCccccccCcccceeecCCccccc---cccceEEEEecCccceeeccCCceEEecCchhhhccCCchhhhc
Confidence 99999999999999999876321 1222222 13579999999999999999999999999999999999765 55
Q ss_pred cccEEecc--ccCceEEEeecCCCcceeEE
Q 001236 598 KTPALVEA--LKDRHVKYIACGSNYSAAIC 625 (1117)
Q Consensus 598 ~~Pt~V~~--l~~~~V~~VacG~~hT~aL~ 625 (1117)
..|+++.. +....++..-||.++.+...
T Consensus 434 ~~pt~i~~~~~~~~~~i~~g~~~~~~v~~~ 463 (476)
T COG5184 434 LVPTLIRQPLLSGHNIILAGYGNQFSVIEE 463 (476)
T ss_pred cccccccccccCCCceEEeccCcceEEEec
Confidence 78888874 66777888888887777664
|
|
| >COG5184 ATS1 Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1427 consensus Uncharacterized conserved protein, contains RCC1 domain [Function unknown] | Back alignment and domain information |
|---|
| >KOG1427 consensus Uncharacterized conserved protein, contains RCC1 domain [Function unknown] | Back alignment and domain information |
|---|
| >PF08381 BRX: Transcription factor regulating root and shoot growth via Pin3; InterPro: IPR013591 This is a short domain, approximately 35 residues in length that is found near the C terminus in a number of plant proteins, being repeated in some members | Back alignment and domain information |
|---|
| >KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] | Back alignment and domain information |
|---|
| >KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] | Back alignment and domain information |
|---|
| >KOG1428 consensus Inhibitor of type V adenylyl cyclases/Neuronal presynaptic protein Highwire/PAM/RPM-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1428 consensus Inhibitor of type V adenylyl cyclases/Neuronal presynaptic protein Highwire/PAM/RPM-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis | Back alignment and domain information |
|---|
| >KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF13713 BRX_N: Transcription factor BRX N-terminal domain | Back alignment and domain information |
|---|
| >KOG1264 consensus Phospholipase C [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PF00415 RCC1: Regulator of chromosome condensation (RCC1) repeat; InterPro: IPR000408 The regulator of chromosome condensation (RCC1) [] is a eukaryotic protein which binds to chromatin and interacts with ran, a nuclear GTP-binding protein IPR002041 from INTERPRO, to promote the loss of bound GDP and the uptake of fresh GTP, thus acting as a guanine-nucleotide dissociation stimulator (GDS) | Back alignment and domain information |
|---|
| >PF01363 FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >KOG0941 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1818 consensus Membrane trafficking and cell signaling protein HRS, contains VHS and FYVE domains [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF00415 RCC1: Regulator of chromosome condensation (RCC1) repeat; InterPro: IPR000408 The regulator of chromosome condensation (RCC1) [] is a eukaryotic protein which binds to chromatin and interacts with ran, a nuclear GTP-binding protein IPR002041 from INTERPRO, to promote the loss of bound GDP and the uptake of fresh GTP, thus acting as a guanine-nucleotide dissociation stimulator (GDS) | Back alignment and domain information |
|---|
| >smart00064 FYVE Protein present in Fab1, YOTB, Vac1, and EEA1 | Back alignment and domain information |
|---|
| >KOG2999 consensus Regulator of Rac1, required for phagocytosis and cell migration [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0941 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1729 consensus FYVE finger containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >PTZ00303 phosphatidylinositol kinase; Provisional | Back alignment and domain information |
|---|
| >PF13540 RCC1_2: Regulator of chromosome condensation (RCC1) repeat; PDB: 3QI0_D 1JTD_B 3QHY_B | Back alignment and domain information |
|---|
| >PF13540 RCC1_2: Regulator of chromosome condensation (RCC1) repeat; PDB: 3QI0_D 1JTD_B 3QHY_B | Back alignment and domain information |
|---|
| >KOG1819 consensus FYVE finger-containing proteins [General function prediction only] | Back alignment and domain information |
|---|
| >cd00065 FYVE FYVE domain; Zinc-binding domain; targets proteins to membrane lipids via interaction with phosphatidylinositol-3-phosphate, PI3P; present in Fab1, YOTB, Vac1, and EEA1; | Back alignment and domain information |
|---|
| >KOG1842 consensus FYVE finger-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1841 consensus Smad anchor for receptor activation [Defense mechanisms] | Back alignment and domain information |
|---|
| >cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown] | Back alignment and domain information |
|---|
| >cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain | Back alignment and domain information |
|---|
| >cd01238 PH_Tec Tec pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >smart00233 PH Pleckstrin homology domain | Back alignment and domain information |
|---|
| >cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ] | Back alignment and domain information |
|---|
| >KOG1843 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01264 PH_melted Melted pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd00821 PH Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd00900 PH-like Pleckstrin homology-like domain | Back alignment and domain information |
|---|
| >cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG3669 consensus Uncharacterized conserved protein, contains dysferlin, TECPR and PH domains [General function prediction only] | Back alignment and domain information |
|---|
| >KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF11725 AvrE: Pathogenicity factor; InterPro: IPR021085 This family is secreted by Gram-negative Gammaproteobacteria such as Pseudomonas syringae of tomato and Erwinia amylovora (Fire blight bacteria), amongst others | Back alignment and domain information |
|---|
| >cd01241 PH_Akt Akt pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF15409 PH_8: Pleckstrin homology domain | Back alignment and domain information |
|---|
| >cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG1265 consensus Phospholipase C [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG1811 consensus Predicted Zn2+-binding protein, contains FYVE domain [General function prediction only] | Back alignment and domain information |
|---|
| >PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C | Back alignment and domain information |
|---|
| >cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain | Back alignment and domain information |
|---|
| >cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG3669 consensus Uncharacterized conserved protein, contains dysferlin, TECPR and PH domains [General function prediction only] | Back alignment and domain information |
|---|
| >cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PLN02153 epithiospecifier protein | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >PF03904 DUF334: Domain of unknown function (DUF334); InterPro: IPR005602 This is a family of proteins found in Staphylococcus aureus plasmid with no characterised function | Back alignment and domain information |
|---|
| >PF03962 Mnd1: Mnd1 family; InterPro: IPR005647 This family of proteins includes meiotic nuclear division protein 1 (MND1) from Saccharomyces cerevisiae (Baker's yeast) | Back alignment and domain information |
|---|
| >PF08458 PH_2: Plant pleckstrin homology-like region; InterPro: IPR013666 This domain describes a pleckstrin homology (PH)-like region found in several plant proteins of unknown function | Back alignment and domain information |
|---|
| >PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes [] | Back alignment and domain information |
|---|
| >PRK09973 putative outer membrane lipoprotein; Provisional | Back alignment and domain information |
|---|
| >KOG0943 consensus Predicted ubiquitin-protein ligase/hyperplastic discs protein, HECT superfamily [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PRK15396 murein lipoprotein; Provisional | Back alignment and domain information |
|---|
| >KOG2391 consensus Vacuolar sorting protein/ubiquitin receptor VPS23 [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd01232 PH_TRIO Trio pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF02318 FYVE_2: FYVE-type zinc finger; InterPro: IPR003315 This entry represents the zinc-binding domain found in rabphilin Rab3A | Back alignment and domain information |
|---|
| >COG3074 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PF02403 Seryl_tRNA_N: Seryl-tRNA synthetase N-terminal domain; InterPro: IPR015866 The aminoacyl-tRNA synthetases (6 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1117 | ||||
| 4d9s_A | 406 | Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv | 4e-45 | ||
| 4d9s_A | 406 | Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv | 7e-26 | ||
| 4d9s_A | 406 | Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv | 1e-11 | ||
| 4dnw_A | 374 | Crystal Structure Of Uvb-Resistance Protein Uvr8 Le | 6e-45 | ||
| 4dnw_A | 374 | Crystal Structure Of Uvb-Resistance Protein Uvr8 Le | 1e-25 | ||
| 4dnw_A | 374 | Crystal Structure Of Uvb-Resistance Protein Uvr8 Le | 1e-11 | ||
| 4dnv_A | 370 | Crystal Structure Of The W285f Mutant Of Uvb-Resist | 6e-45 | ||
| 4dnv_A | 370 | Crystal Structure Of The W285f Mutant Of Uvb-Resist | 1e-25 | ||
| 4dnv_A | 370 | Crystal Structure Of The W285f Mutant Of Uvb-Resist | 1e-11 | ||
| 4dnu_A | 372 | Crystal Structure Of The W285a Mutant Of Uvb-Resist | 6e-44 | ||
| 4dnu_A | 372 | Crystal Structure Of The W285a Mutant Of Uvb-Resist | 1e-25 | ||
| 3kci_A | 389 | The Third Rld Domain Of Herc2 Length = 389 | 2e-39 | ||
| 3kci_A | 389 | The Third Rld Domain Of Herc2 Length = 389 | 5e-20 | ||
| 1a12_A | 413 | Regulator Of Chromosome Condensation (Rcc1) Of Huma | 2e-16 | ||
| 1a12_A | 413 | Regulator Of Chromosome Condensation (Rcc1) Of Huma | 3e-05 | ||
| 1i2m_B | 402 | Ran-Rcc1-So4 Complex Length = 402 | 3e-16 | ||
| 1i2m_B | 402 | Ran-Rcc1-So4 Complex Length = 402 | 4e-05 | ||
| 3mvd_K | 423 | Crystal Structure Of The Chromatin Factor Rcc1 In C | 2e-14 | ||
| 3of7_A | 473 | The Crystal Structure Of Prp20p From Saccharomyces | 4e-11 | ||
| 3of7_A | 473 | The Crystal Structure Of Prp20p From Saccharomyces | 1e-06 | ||
| 3of7_A | 473 | The Crystal Structure Of Prp20p From Saccharomyces | 6e-04 | ||
| 1hyi_A | 65 | Solution Structure Of The Eea1 Fyve Domain Complexe | 8e-10 | ||
| 1joc_A | 125 | Eea1 Homodimer Of C-Terminal Fyve Domain Bound To I | 8e-10 | ||
| 2yqm_A | 89 | Solution Structure Of The Fyve Domain In Zinc Finge | 9e-07 | ||
| 3t7l_A | 90 | Crystal Structure Of The Fyve Domain Of Endofin (Zf | 1e-06 | ||
| 2yw8_A | 82 | Crystal Structure Of Human Run And Fyve Domain-Cont | 2e-06 | ||
| 3zyq_A | 226 | Crystal Structure Of The Tandem Vhs And Fyve Domain | 9e-06 | ||
| 1dvp_A | 220 | Crystal Structure Of The Vhs And Fyve Tandem Domain | 2e-05 | ||
| 1mai_A | 131 | Structure Of The Pleckstrin Homology Domain From Ph | 1e-04 | ||
| 3mpx_A | 434 | Crystal Structure Of The Dh And Ph-1 Domains Of Hum | 6e-04 |
| >pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv Resistance Locus 8) Length = 406 | Back alignment and structure |
|
| >pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv Resistance Locus 8) Length = 406 | Back alignment and structure |
| >pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv Resistance Locus 8) Length = 406 | Back alignment and structure |
| >pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8 Length = 374 | Back alignment and structure |
| >pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8 Length = 374 | Back alignment and structure |
| >pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8 Length = 374 | Back alignment and structure |
| >pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance Protein Uvr8 Length = 370 | Back alignment and structure |
| >pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance Protein Uvr8 Length = 370 | Back alignment and structure |
| >pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance Protein Uvr8 Length = 370 | Back alignment and structure |
| >pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance Protein Uvr8 Length = 372 | Back alignment and structure |
| >pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance Protein Uvr8 Length = 372 | Back alignment and structure |
| >pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2 Length = 389 | Back alignment and structure |
| >pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2 Length = 389 | Back alignment and structure |
| >pdb|1A12|A Chain A, Regulator Of Chromosome Condensation (Rcc1) Of Human Length = 413 | Back alignment and structure |
| >pdb|1A12|A Chain A, Regulator Of Chromosome Condensation (Rcc1) Of Human Length = 413 | Back alignment and structure |
| >pdb|1I2M|B Chain B, Ran-Rcc1-So4 Complex Length = 402 | Back alignment and structure |
| >pdb|1I2M|B Chain B, Ran-Rcc1-So4 Complex Length = 402 | Back alignment and structure |
| >pdb|3MVD|K Chain K, Crystal Structure Of The Chromatin Factor Rcc1 In Complex With The Nucleosome Core Particle Length = 423 | Back alignment and structure |
| >pdb|3OF7|A Chain A, The Crystal Structure Of Prp20p From Saccharomyces Cerevisiae And Its Binding Properties To Gsp1p And Histones Length = 473 | Back alignment and structure |
| >pdb|3OF7|A Chain A, The Crystal Structure Of Prp20p From Saccharomyces Cerevisiae And Its Binding Properties To Gsp1p And Histones Length = 473 | Back alignment and structure |
| >pdb|3OF7|A Chain A, The Crystal Structure Of Prp20p From Saccharomyces Cerevisiae And Its Binding Properties To Gsp1p And Histones Length = 473 | Back alignment and structure |
| >pdb|1HYI|A Chain A, Solution Structure Of The Eea1 Fyve Domain Complexed With Inositol 1,3-Bisphosphate Length = 65 | Back alignment and structure |
| >pdb|1JOC|A Chain A, Eea1 Homodimer Of C-Terminal Fyve Domain Bound To Inositol 1,3-Diphosphate Length = 125 | Back alignment and structure |
| >pdb|2YQM|A Chain A, Solution Structure Of The Fyve Domain In Zinc Finger Fyve Domain-Containing Protein 12 Length = 89 | Back alignment and structure |
| >pdb|3T7L|A Chain A, Crystal Structure Of The Fyve Domain Of Endofin (Zfyve16) At 1.1a Resolution Length = 90 | Back alignment and structure |
| >pdb|2YW8|A Chain A, Crystal Structure Of Human Run And Fyve Domain-Containing Protein Length = 82 | Back alignment and structure |
| >pdb|3ZYQ|A Chain A, Crystal Structure Of The Tandem Vhs And Fyve Domains Of Hepatocyte Growth Factor-Regulated Tyrosine Kinase Substrate (Hgs-Hrs) At 1.48 A Resolution Length = 226 | Back alignment and structure |
| >pdb|1DVP|A Chain A, Crystal Structure Of The Vhs And Fyve Tandem Domains Of Hrs, A Protein Involved In Membrane Trafficking And Signal Transduction Length = 220 | Back alignment and structure |
| >pdb|1MAI|A Chain A, Structure Of The Pleckstrin Homology Domain From Phospholipase C Delta In Complex With Inositol Trisphosphate Length = 131 | Back alignment and structure |
| >pdb|3MPX|A Chain A, Crystal Structure Of The Dh And Ph-1 Domains Of Human Fgd5 Length = 434 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens} Length = 389 | Back alignment and structure |
|---|
Score = 437 bits (1126), Expect = e-144
Identities = 129/397 (32%), Positives = 185/397 (46%), Gaps = 36/397 (9%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNY---LGTRADVLLPRPLESNVVLDVHHIACGVRHAA 296
G +Y WG N A V +P P E+ L + G +
Sbjct: 20 GTIYGWGH-------------NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF 66
Query: 297 LVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFV--TCGEFHTCAVTMAG 354
VT G+++ G +GGRLG G + + P LLES+ + V G H A++ G
Sbjct: 67 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 126
Query: 355 ELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTF 414
E+Y+WG+ G LGHG P+ I L G++V V G H+A +T+ G L+T+
Sbjct: 127 EVYSWGEAED--GKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTW 183
Query: 415 GDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVW--HTAAVVEVIVTQSSASVSSG 472
G G +G LGH D ++ P+ VE+L G R + +ACG T +
Sbjct: 184 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT-----------DDD 232
Query: 473 KLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGST 532
+++WGDGD +LG G + P + +L KV CG +V LT SG V+T G
Sbjct: 233 TVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 292
Query: 533 VYGQLGNPNADGKL-PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGH 591
Y +LG+ + D P V+ L G+ V IA G+ H T EVYTWG G+LG
Sbjct: 293 DYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGD 351
Query: 592 GDVEDRKTPALVEALKDRHVKYIACGSNYSAAICLHK 628
G + P LV AL+ + V +ACGS ++ A K
Sbjct: 352 GTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSK 388
|
| >3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens} Length = 389 | Back alignment and structure |
|---|
| >3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens} Length = 389 | Back alignment and structure |
|---|
| >4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A Length = 406 | Back alignment and structure |
|---|
| >3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} Length = 423 | Back alignment and structure |
|---|
| >3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} Length = 423 | Back alignment and structure |
|---|
| >3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} Length = 423 | Back alignment and structure |
|---|
| >3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} Length = 423 | Back alignment and structure |
|---|
| >1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B Length = 413 | Back alignment and structure |
|---|
| >1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B Length = 413 | Back alignment and structure |
|---|
| >3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae} Length = 473 | Back alignment and structure |
|---|
| >3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae} Length = 473 | Back alignment and structure |
|---|
| >3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae} Length = 473 | Back alignment and structure |
|---|
| >3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae} Length = 473 | Back alignment and structure |
|---|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B Length = 282 | Back alignment and structure |
|---|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B Length = 282 | Back alignment and structure |
|---|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B Length = 282 | Back alignment and structure |
|---|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B Length = 282 | Back alignment and structure |
|---|
| >1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1 Length = 131 | Back alignment and structure |
|---|
| >1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A Length = 125 | Back alignment and structure |
|---|
| >2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A Length = 82 | Back alignment and structure |
|---|
| >1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major} Length = 84 | Back alignment and structure |
|---|
| >1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1 Length = 88 | Back alignment and structure |
|---|
| >3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens} Length = 90 | Back alignment and structure |
|---|
| >3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A Length = 203 | Back alignment and structure |
|---|
| >1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 84 | Back alignment and structure |
|---|
| >1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1 Length = 73 | Back alignment and structure |
|---|
| >1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1 Length = 220 | Back alignment and structure |
|---|
| >3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A* Length = 226 | Back alignment and structure |
|---|
| >3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens} Length = 434 | Back alignment and structure |
|---|
| >1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1 Length = 120 | Back alignment and structure |
|---|
| >3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} Length = 885 | Back alignment and structure |
|---|
| >2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B Length = 799 | Back alignment and structure |
|---|
| >3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A Length = 816 | Back alignment and structure |
|---|
| >2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A Length = 406 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1 Length = 134 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1117 | |||
| 3kci_A | 389 | Probable E3 ubiquitin-protein ligase HERC2; WD40, | 100.0 | |
| 4d9s_A | 406 | UVB-resistance protein UVR8; UV resistance, UV-B p | 100.0 | |
| 1a12_A | 413 | RCC1, regulator of chromosome condensation 1; guan | 100.0 | |
| 3mvd_K | 423 | Regulator of chromosome condensation; protein-DNA | 100.0 | |
| 3of7_A | 473 | Regulator of chromosome condensation; beta-propell | 100.0 | |
| 4d9s_A | 406 | UVB-resistance protein UVR8; UV resistance, UV-B p | 100.0 | |
| 3kci_A | 389 | Probable E3 ubiquitin-protein ligase HERC2; WD40, | 100.0 | |
| 3mvd_K | 423 | Regulator of chromosome condensation; protein-DNA | 100.0 | |
| 1a12_A | 413 | RCC1, regulator of chromosome condensation 1; guan | 100.0 | |
| 3of7_A | 473 | Regulator of chromosome condensation; beta-propell | 100.0 | |
| 3qhy_B | 282 | Beta-lactamase inhibitory protein II; enyzme-inhib | 100.0 | |
| 3qhy_B | 282 | Beta-lactamase inhibitory protein II; enyzme-inhib | 100.0 | |
| 1mai_A | 131 | Phospholipase C delta-1; pleckstrin, inositol tris | 99.91 | |
| 2zkm_X | 799 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 99.5 | |
| 3ohm_B | 885 | 1-phosphatidylinositol-4,5-bisphosphate phosphodi | 99.5 | |
| 3a98_B | 203 | Engulfment and cell motility protein 1; protein-pr | 99.48 | |
| 3qr0_A | 816 | Phospholipase C-beta (PLC-beta); PH domain, EF han | 99.45 | |
| 1x4u_A | 84 | Zinc finger, FYVE domain containing 27 isoform B; | 99.35 | |
| 1z2q_A | 84 | LM5-1; membrane protein, FYVE domain, zinc-finger; | 99.24 | |
| 2yw8_A | 82 | RUN and FYVE domain-containing protein 1; structur | 99.23 | |
| 1joc_A | 125 | EEA1, early endosomal autoantigen 1; FYVE domain, | 99.18 | |
| 1vfy_A | 73 | Phosphatidylinositol-3-phosphate binding FYVE doma | 99.16 | |
| 3t7l_A | 90 | Zinc finger FYVE domain-containing protein 16; str | 99.16 | |
| 1wfk_A | 88 | Zinc finger, FYVE domain containing 19; riken stru | 99.09 | |
| 3zyq_A | 226 | Hepatocyte growth factor-regulated tyrosine kinas | 98.96 | |
| 1dvp_A | 220 | HRS, hepatocyte growth factor-regulated tyrosine k | 98.95 | |
| 1y02_A | 120 | CARP2, FYVE-ring finger protein sakura; zinc-bindi | 98.9 | |
| 3mpx_A | 434 | FYVE, rhogef and PH domain-containing protein 5; s | 98.68 | |
| 2lul_A | 164 | Tyrosine-protein kinase TEC; structural genomics, | 97.48 | |
| 1v5u_A | 117 | SBF1, SET binding factor 1; MTMR5, the pleckstrin | 97.18 | |
| 1btk_A | 169 | Bruton'S tyrosine kinase; transferase, PH domain, | 97.14 | |
| 2d9v_A | 130 | Pleckstrin homology domain-containing protein fami | 97.12 | |
| 1fao_A | 126 | Dual adaptor of phosphotyrosine and 3- phosphoinos | 96.9 | |
| 2dhk_A | 119 | TBC1 domain family member 2; PH domain, paris-1, s | 96.87 | |
| 2cod_A | 115 | Centaurin-delta 1; ARF GAP and RHO GAP with ankyri | 96.76 | |
| 2rlo_A | 128 | Centaurin-gamma 1; split PH domain, alternative sp | 96.7 | |
| 1v89_A | 118 | Hypothetical protein KIAA0053; pleckstrin homology | 96.67 | |
| 2d9x_A | 120 | Oxysterol binding protein-related protein 11; PH d | 96.65 | |
| 1eaz_A | 125 | Tandem PH domain containing protein-1; lipid-bindi | 96.56 | |
| 1pls_A | 113 | Pleckstrin homology domain; phosphorylation; NMR { | 96.53 | |
| 2cof_A | 107 | Protein KIAA1914; PH domain, structural genomics, | 96.46 | |
| 1x05_A | 129 | Pleckstrin; PH domain, structural genomics, NPPSFA | 96.39 | |
| 2dn6_A | 115 | KIAA0640 protein; PH domain, structural genomics, | 96.36 | |
| 2i5f_A | 109 | Pleckstrin; PH domain, protein-inositol phosphate | 96.32 | |
| 2da0_A | 114 | 130-kDa phosphatidylinositol 4,5-biphosphate- depe | 96.3 | |
| 1x1g_A | 129 | Pleckstrin 2; PH domain, structural genomics, rike | 96.27 | |
| 1fgy_A | 127 | GRP1; PH domain, signaling protein; HET: 4IP; 1.50 | 96.18 | |
| 1qqg_A | 264 | IRS-1, insulin receptor substrate 1; beta-sandwhic | 96.17 | |
| 3rcp_A | 103 | Pleckstrin homology domain-containing family A ME; | 96.13 | |
| 1wgq_A | 109 | FYVE, rhogef and PH domain containing 6; ethanol d | 96.1 | |
| 2rsg_A | 94 | Collagen type IV alpha-3-binding protein; pleckstr | 96.06 | |
| 1wg7_A | 150 | Dedicator of cytokinesis protein 9; pleckstrin hom | 95.94 | |
| 1v5p_A | 126 | Pleckstrin homology domain-containing, family A; T | 95.93 | |
| 1dyn_A | 125 | Dynamin; signal transduction protein; 2.20A {Homo | 95.81 | |
| 2w2x_D | 124 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 95.77 | |
| 1unq_A | 125 | RAC-alpha serine/threonine kinase; transferase, pl | 95.51 | |
| 1u5d_A | 108 | SKAP55, SRC kinase-associated phosphoprotein of 55 | 95.4 | |
| 2d9y_A | 117 | Pleckstrin homology domain-containing protein fami | 95.32 | |
| 2rov_A | 117 | RHO-associated protein kinase 2; ATP-binding, coil | 95.3 | |
| 3aj4_A | 112 | Pleckstrin homology domain-containing family B ME; | 95.29 | |
| 1x1f_A | 149 | Signal-transducing adaptor protein 1; docking prot | 95.26 | |
| 3tfm_A | 228 | Myosin X; split PH domain, motor protein; 2.53A {R | 95.22 | |
| 1u5f_A | 148 | SRC-associated adaptor protein; PH domain of SKAP- | 95.17 | |
| 1u5e_A | 211 | SRC-associated adaptor protein; novel dimerization | 95.12 | |
| 2j59_M | 168 | RHO-GTPase activating protein 10; ARF, ARF1, ARFBD | 95.05 | |
| 2y7b_A | 134 | Actin-binding protein anillin; cell cycle; 1.90A { | 95.02 | |
| 1upq_A | 123 | PEPP1; PH domain, phosphoinositide binding, signal | 94.71 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 94.67 | |
| 1wjm_A | 123 | Beta-spectrin III; PH domain, signal transduction, | 94.45 | |
| 2dkp_A | 128 | Pleckstrin homology domain-containing family A mem | 94.39 | |
| 1v88_A | 130 | Oxysterol binding protein-related protein 8; vesic | 94.31 | |
| 2yry_A | 122 | Pleckstrin homology domain-containing family A mem | 94.3 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 94.24 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 94.05 | |
| 3lju_X | 386 | ARF-GAP with dual PH domain-containing protein 1; | 93.83 | |
| 1wi1_A | 126 | Calcium-dependent activator protein for secretion, | 93.38 | |
| 2coc_A | 112 | FYVE, rhogef and PH domain containing protein 3; s | 92.43 | |
| 4gbf_A | 400 | Phikz131; 7-bladed beta-propeller, possibly partic | 92.09 | |
| 1btn_A | 106 | Beta-spectrin; signal transduction protein; HET: I | 91.96 | |
| 3cxb_B | 112 | Pleckstrin homology domain-containing family M mem | 91.91 | |
| 3lju_X | 386 | ARF-GAP with dual PH domain-containing protein 1; | 91.88 | |
| 4a6h_A | 120 | Phosphatidylinositol 4,5-bisphosphate-binding Pro | 91.78 | |
| 4gbf_A | 400 | Phikz131; 7-bladed beta-propeller, possibly partic | 91.77 | |
| 2r09_A | 347 | Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-ph | 91.75 | |
| 2vrw_B | 406 | P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP | 91.45 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 91.41 | |
| 4h8s_A | 407 | DCC-interacting protein 13-beta; BAR domain, pleck | 90.15 | |
| 1dro_A | 122 | Beta-spectrin; cytoskeleton; NMR {Drosophila melan | 90.13 | |
| 3tca_A | 291 | Amyloid beta A4 precursor protein-binding family 1 | 90.03 | |
| 3a8p_A | 263 | T-lymphoma invasion and metastasis-inducing protei | 89.43 | |
| 2eqb_B | 97 | RAB guanine nucleotide exchange factor SEC2; coile | 89.35 | |
| 2q13_A | 385 | DCC-interacting protein 13 alpha; APPL1, BAR domai | 89.18 | |
| 3u1c_A | 101 | Tropomyosin alpha-1 chain; anti-parallel coiled co | 88.91 | |
| 3no0_A | 276 | DNA gyrase subunit A; DNA topology, topoisomerase, | 88.73 | |
| 1v61_A | 132 | RAC/CDC42 guanine nucleotide exchange factor (GEF) | 88.58 | |
| 2p0d_A | 129 | RHO GTPase-activating protein 9; protein-phosphoin | 88.45 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 87.62 | |
| 2fjl_A | 150 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 87.57 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 87.34 | |
| 3a2a_A | 58 | Voltage-gated hydrogen channel 1; voltage-gated pr | 84.17 | |
| 3pp2_A | 124 | RHO GTPase-activating protein 27; PH domain, GTPas | 84.11 | |
| 3mq7_A | 121 | Bone marrow stromal antigen 2; HIV, antiviral prot | 82.53 | |
| 3fx7_A | 94 | Putative uncharacterized protein; double helix, un | 82.4 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 81.7 | |
| 3u59_A | 101 | Tropomyosin beta chain; muscle contraction, actin, | 80.95 |
| >3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-65 Score=598.67 Aligned_cols=372 Identities=34% Similarity=0.608 Sum_probs=333.1
Q ss_pred cccccCCCCCEEEecCCCCCCcccCCCCCCccccCcccccccccccccCCCCCEEEEEecCceEEEEEcCCcEEEEeCCC
Q 001236 232 APDDCDALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEES 311 (1117)
Q Consensus 232 ~~~~~~s~G~Vy~WG~n~~~g~LG~G~~~~~~~~~~~~~~~~P~~l~s~~~~~I~~Ia~G~~Hs~~LT~dG~VyswG~N~ 311 (1117)
.+.+++++|.||+||.| ..||||.+. ..+...|.+++.....+|++|+||..|+++|+++|+||+||.|.
T Consensus 12 ~~~~l~~~G~v~~wG~n-~~GqLG~~~---------~~~~~~p~~v~~~~~~~i~~i~~G~~~~~~l~~~G~v~~wG~n~ 81 (389)
T 3kci_A 12 ENLYFQGSGTIYGWGHN-HRGQLGGIE---------GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 81 (389)
T ss_dssp ---------CEEEEEEC-TTSTTSSCS---------CSEEEEEEECHHHHHTCEEEEEEETTEEEEEETTSCEEEEECCG
T ss_pred cceeECCCCeEEEeeCC-CCccCCCCc---------CccccCCEecccccCCceEEEEeCCCeEEEEcCCCcEEEEECCC
Confidence 35789999999999999 689999875 24556788887777789999999999999999999999999999
Q ss_pred CCccCCCCCCceeccEEeccCCCCCe--EEEEecCCeEEEEEcCCcEEEEcCCCCCCCccCCCCCcceeeeeeecCCCCC
Q 001236 312 GGRLGHGVGKDIVQPHLLESLTMTSV--DFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEG 389 (1117)
Q Consensus 312 ~GQLG~g~~~~~~~P~~V~~l~~~~I--~~Va~G~~hs~aLT~dG~VysWG~n~~~~GqLG~g~~~~~~~P~~V~~~l~~ 389 (1117)
+||||++.......|.++..+....| ++|+||.+|+++|+++|+||+||.| .+||||++.......|.+|.. +.+
T Consensus 82 ~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n--~~GqLG~g~~~~~~~p~~v~~-l~~ 158 (389)
T 3kci_A 82 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA--EDGKLGHGNRSPCDRPRVIES-LRG 158 (389)
T ss_dssp GGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECC--GGGTTCSSSCCCEEEEEECGG-GTT
T ss_pred CCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCC--CCCcCCCCCCccCcCCeEecc-cCC
Confidence 99999999989999999998876654 6788999999999999999999999 789999999988889999874 567
Q ss_pred CcEEEEEecCCeeEEEccCCcEEEEeCCCCCCcCCCCCCCcccceeecccccceEEEEeeCC--ceEEEEEEeeeccccc
Q 001236 390 LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGV--WHTAAVVEVIVTQSSA 467 (1117)
Q Consensus 390 ~~Iv~Va~G~~HtlaLt~dG~Vy~wG~N~~GQLG~g~~~~~~~P~~V~~l~~~kI~~VacG~--~Ht~aL~e~~~~~~~~ 467 (1117)
.+|++|+||..|+++|+++|+||+||.|.+||||+++......|+.+..+.+.+|++|+||. .|+++|
T Consensus 159 ~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l---------- 228 (389)
T 3kci_A 159 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL---------- 228 (389)
T ss_dssp SCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEE----------
T ss_pred CeEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEE----------
Confidence 79999999999999999999999999999999999999999999999999999999999995 899999
Q ss_pred ccCCceEEEecCCCCCCCCCCCCCCcccceeecccCCCCEEEEEecCcEEEEEecCCeEEEEeCCCCCCCCCCCCCC-Cc
Q 001236 468 SVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KL 546 (1117)
Q Consensus 468 ~t~~G~Ly~WG~n~~GQLG~g~~~~~~~P~~V~~l~~~~I~~Ia~G~~htlaLT~dG~Vy~wGsN~~GQLG~~~~~~-~~ 546 (1117)
+.+|+||+||.|.+||||.++......|+.|..+.+.+|++|+||.+|++||+++|+||+||.|.+||||.+.... ..
T Consensus 229 -~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~ 307 (389)
T 3kci_A 229 -TDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 307 (389)
T ss_dssp -ETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEE
T ss_pred -ccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccC
Confidence 5599999999999999999999889999999998888999999999999999999999999999999999986443 45
Q ss_pred ceeeecccCCCCeEEEEeCCCcceeeecCCeEEEEeCCCCCCCCCCCCCCCcccEEeccccCceEEEeecCCCcceeEEe
Q 001236 547 PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICL 626 (1117)
Q Consensus 547 P~~v~~~l~~~~V~~Is~G~~Ht~aLT~dG~Vy~WG~n~~GQLG~G~~~~~~~Pt~V~~l~~~~V~~VacG~~hT~aL~~ 626 (1117)
|..+.. +.+.+|++|+||.+|+++|+++|+||+||.|.+||||+|+..+...|++|+.+.+.+|.+|+||.+||+||+.
T Consensus 308 P~~v~~-l~~~~v~~ia~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~~~~~~v~~va~G~~ht~al~~ 386 (389)
T 3kci_A 308 PRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWST 386 (389)
T ss_dssp EEECGG-GTTCCEEEEEECSSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCCCEEEEETTEEEEECC
T ss_pred CeEecc-CCCCCEEEEEeccCeEEEECCCCCEEEeeCCCCCcCCCCCCCCccCcEEecccCCCCEEEEEecCCcEEEEec
Confidence 776664 5678899999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred ee
Q 001236 627 HK 628 (1117)
Q Consensus 627 ~k 628 (1117)
.+
T Consensus 387 ~~ 388 (389)
T 3kci_A 387 SK 388 (389)
T ss_dssp --
T ss_pred CC
Confidence 53
|
| >4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A | Back alignment and structure |
|---|
| >1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B | Back alignment and structure |
|---|
| >3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A | Back alignment and structure |
|---|
| >3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
| >3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B | Back alignment and structure |
|---|
| >3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B | Back alignment and structure |
|---|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B | Back alignment and structure |
|---|
| >1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B | Back alignment and structure |
|---|
| >3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
| >3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A | Back alignment and structure |
|---|
| >3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A | Back alignment and structure |
|---|
| >1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major} | Back alignment and structure |
|---|
| >2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A | Back alignment and structure |
|---|
| >1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A | Back alignment and structure |
|---|
| >1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1 | Back alignment and structure |
|---|
| >3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens} | Back alignment and structure |
|---|
| >1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1 | Back alignment and structure |
|---|
| >3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A* | Back alignment and structure |
|---|
| >1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1 | Back alignment and structure |
|---|
| >1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1 | Back alignment and structure |
|---|
| >3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
| >2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A* | Back alignment and structure |
|---|
| >2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
| >1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A | Back alignment and structure |
|---|
| >2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A | Back alignment and structure |
|---|
| >2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A | Back alignment and structure |
|---|
| >2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A* | Back alignment and structure |
|---|
| >1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A* | Back alignment and structure |
|---|
| >3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A | Back alignment and structure |
|---|
| >1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A | Back alignment and structure |
|---|
| >2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A | Back alignment and structure |
|---|
| >1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A | Back alignment and structure |
|---|
| >1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus} | Back alignment and structure |
|---|
| >3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A | Back alignment and structure |
|---|
| >1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus} | Back alignment and structure |
|---|
| >1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A | Back alignment and structure |
|---|
| >1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A | Back alignment and structure |
|---|
| >2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A | Back alignment and structure |
|---|
| >2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
| >1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A* | Back alignment and structure |
|---|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
| >1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
| >3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C* | Back alignment and structure |
|---|
| >1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >4gbf_A Phikz131; 7-bladed beta-propeller, possibly participates in binding of phage to the HOST cell, viral protein; 1.95A {Pseudomonas phage phikz} | Back alignment and structure |
|---|
| >1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A | Back alignment and structure |
|---|
| >3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B | Back alignment and structure |
|---|
| >3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C* | Back alignment and structure |
|---|
| >4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A | Back alignment and structure |
|---|
| >4gbf_A Phikz131; 7-bladed beta-propeller, possibly participates in binding of phage to the HOST cell, viral protein; 1.95A {Pseudomonas phage phikz} | Back alignment and structure |
|---|
| >2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A* | Back alignment and structure |
|---|
| >2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A | Back alignment and structure |
|---|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
| >4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
| >1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus} | Back alignment and structure |
|---|
| >3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A | Back alignment and structure |
|---|
| >2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1 | Back alignment and structure |
|---|
| >2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A | Back alignment and structure |
|---|
| >3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A | Back alignment and structure |
|---|
| >3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A* | Back alignment and structure |
|---|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
| >2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1 | Back alignment and structure |
|---|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
| >3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens} | Back alignment and structure |
|---|
| >3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A | Back alignment and structure |
|---|
| >3fx7_A Putative uncharacterized protein; double helix, unknown function; 1.65A {Helicobacter pylori} SCOP: a.25.5.1 PDB: 2gts_A | Back alignment and structure |
|---|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
| >3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1117 | ||||
| d1a12a_ | 401 | b.69.5.1 (A:) Regulator of chromosome condensation | 1e-40 | |
| d1a12a_ | 401 | b.69.5.1 (A:) Regulator of chromosome condensation | 5e-32 | |
| d1a12a_ | 401 | b.69.5.1 (A:) Regulator of chromosome condensation | 9e-23 | |
| d1a12a_ | 401 | b.69.5.1 (A:) Regulator of chromosome condensation | 1e-22 | |
| d1a12a_ | 401 | b.69.5.1 (A:) Regulator of chromosome condensation | 7e-21 | |
| d1a12a_ | 401 | b.69.5.1 (A:) Regulator of chromosome condensation | 2e-19 | |
| d1a12a_ | 401 | b.69.5.1 (A:) Regulator of chromosome condensation | 1e-18 | |
| d1a12a_ | 401 | b.69.5.1 (A:) Regulator of chromosome condensation | 4e-15 | |
| d1a12a_ | 401 | b.69.5.1 (A:) Regulator of chromosome condensation | 7e-14 | |
| d1maia_ | 119 | b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus | 1e-29 | |
| d1wfka_ | 88 | g.50.1.1 (A:) Zinc finger FYVE domain containing p | 2e-19 | |
| d1joca1 | 64 | g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) | 2e-19 | |
| d2zkmx3 | 131 | b.55.1.1 (X:11-141) Phospholipase C-beta-2 {Human | 2e-19 | |
| d1dvpa2 | 72 | g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila me | 2e-17 | |
| d1vfya_ | 67 | g.50.1.1 (A:) vps27p protein {Baker's yeast (Sacch | 8e-17 | |
| d1jtdb_ | 273 | b.69.5.2 (B:) beta-lactamase inhibitor protein-II, | 1e-16 | |
| d1jtdb_ | 273 | b.69.5.2 (B:) beta-lactamase inhibitor protein-II, | 2e-08 | |
| d1jtdb_ | 273 | b.69.5.2 (B:) beta-lactamase inhibitor protein-II, | 4e-07 | |
| d1jtdb_ | 273 | b.69.5.2 (B:) beta-lactamase inhibitor protein-II, | 5e-05 | |
| d1y02a2 | 51 | g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger pro | 3e-13 | |
| d1zbdb_ | 124 | g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat | 1e-12 |
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 401 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: RCC1/BLIP-II family: Regulator of chromosome condensation RCC1 domain: Regulator of chromosome condensation RCC1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 153 bits (386), Expect = 1e-40
Identities = 86/408 (21%), Positives = 152/408 (37%), Gaps = 49/408 (12%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G V G+ G + + P + DV G H ++
Sbjct: 15 GLVLTLGQ---------GDVGQLGLGENVMERKKPALVSIPE--DVVQAEAGGMHTVCLS 63
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTW 359
+ G+V+++G G LG + + + V V+ G+ HT A+T G ++ W
Sbjct: 64 KSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLW 123
Query: 360 GDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTF 419
G N G++G + + + V V G H ++T+ G L+T G G
Sbjct: 124 GSFRDNNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQ 181
Query: 420 GVLGHGDRKNVS----------------YPREVESLSGLRTIAVACGVWHTAAVVEVIVT 463
G LG + + S +R CG + T A+
Sbjct: 182 GQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISH---- 237
Query: 464 QSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVA--CGHSLTVGLT 521
G ++ +G + ++LG E P + + + V G TV +
Sbjct: 238 -------EGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMD 290
Query: 522 TSGHVFTMGSTVYGQLGNP--NADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVY 579
+ G +++G YG+LG + +P L+ +V +ACGA +T V+
Sbjct: 291 SEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISR---LPAVSSVACGASVGYAVTKDGRVF 347
Query: 580 TWGKGANGRLGHGDVEDRKTPALV--EALKDRHVKYIACGSNYSAAIC 625
WG G N +LG G ED +P + + L++R V ++ G ++ +
Sbjct: 348 AWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLV 395
|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 401 | Back information, alignment and structure |
|---|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 401 | Back information, alignment and structure |
|---|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 401 | Back information, alignment and structure |
|---|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 401 | Back information, alignment and structure |
|---|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 401 | Back information, alignment and structure |
|---|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 401 | Back information, alignment and structure |
|---|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 401 | Back information, alignment and structure |
|---|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 401 | Back information, alignment and structure |
|---|
| >d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 119 | Back information, alignment and structure |
|---|
| >d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]} Length = 88 | Back information, alignment and structure |
|---|
| >d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]} Length = 64 | Back information, alignment and structure |
|---|
| >d2zkmx3 b.55.1.1 (X:11-141) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 131 | Back information, alignment and structure |
|---|
| >d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 72 | Back information, alignment and structure |
|---|
| >d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 67 | Back information, alignment and structure |
|---|
| >d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]} Length = 273 | Back information, alignment and structure |
|---|
| >d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]} Length = 273 | Back information, alignment and structure |
|---|
| >d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]} Length = 273 | Back information, alignment and structure |
|---|
| >d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]} Length = 273 | Back information, alignment and structure |
|---|
| >d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]} Length = 51 | Back information, alignment and structure |
|---|
| >d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1117 | |||
| d1a12a_ | 401 | Regulator of chromosome condensation RCC1 {Human ( | 100.0 | |
| d1a12a_ | 401 | Regulator of chromosome condensation RCC1 {Human ( | 100.0 | |
| d1jtdb_ | 273 | beta-lactamase inhibitor protein-II, BLIP-II {Stre | 100.0 | |
| d1jtdb_ | 273 | beta-lactamase inhibitor protein-II, BLIP-II {Stre | 99.97 | |
| d1maia_ | 119 | Phospholipase C delta-1 {Rat (Rattus norvegicus) [ | 99.88 | |
| d2zkmx3 | 131 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 99.73 | |
| d1joca1 | 64 | Eea1 {Human (Homo sapiens) [TaxId: 9606]} | 99.29 | |
| d1dvpa2 | 72 | Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7 | 99.12 | |
| d1vfya_ | 67 | vps27p protein {Baker's yeast (Saccharomyces cerev | 99.07 | |
| d1wfka_ | 88 | Zinc finger FYVE domain containing protein 19 {Mou | 99.05 | |
| d1y02a2 | 51 | Rififylin (FYVE-RING finger protein Sakura) {Human | 98.49 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 97.73 | |
| d1zbdb_ | 124 | Effector domain of rabphilin-3a {Rat (Rattus norve | 97.5 | |
| d1v5ua_ | 117 | SET binding factor 1, Sbf1 {Mouse (Mus musculus) [ | 97.39 | |
| d1btka_ | 169 | Bruton's tyrosine kinase {Human (Homo sapiens) [Ta | 97.24 | |
| d1x1ga1 | 116 | Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]} | 96.87 | |
| d2coaa1 | 112 | Protein kinase c, d2 type {Human (Homo sapiens) [T | 96.75 | |
| d1faoa_ | 100 | Dual adaptor of phosphotyrosine and 3-phosphoinosi | 96.71 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 96.57 | |
| d1v5pa_ | 126 | Tapp2 {Mouse (Mus musculus) [TaxId: 10090]} | 96.51 | |
| d1u5da1 | 106 | Src kinase-associated phosphoprotein SKAP55 (SCAP1 | 96.48 | |
| d1u5fa1 | 111 | Src-associated adaptor protein Skap2 {Mouse (Mus m | 96.48 | |
| d2coda1 | 102 | Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 96 | 96.43 | |
| d1v89a_ | 118 | Rho-GTPase-activating protein 25 (KIAA0053) {Human | 96.42 | |
| d2i5fa1 | 104 | Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | 96.35 | |
| d1eaza_ | 103 | Tapp1 {Human (Homo sapiens) [TaxId: 9606]} | 96.33 | |
| d1x1fa1 | 136 | Signal-transducing adaptor protein 1, STAP-1 {Huma | 96.23 | |
| d2coca1 | 99 | FYVE, RhoGEF and PH domain containing protein 3, F | 96.22 | |
| d1omwa2 | 119 | G-protein coupled receptor kinase 2 (beta-adrenerg | 96.18 | |
| d1wi1a_ | 126 | Calcium-dependent activator protein for secretion, | 96.16 | |
| d1v5ma_ | 136 | SH2 and PH domain-containing adapter protein APS { | 96.1 | |
| d2elba2 | 101 | DCC-interacting protein 13-alpha, APPL1 {Human (Ho | 95.93 | |
| d1wg7a_ | 150 | Dedicator of cytokinesis protein 9, DOCK9 {Human ( | 95.92 | |
| d2fjla1 | 101 | Phosphoinositide phospholipase C, PLC-gamma-1 {Rat | 95.85 | |
| d2cofa1 | 95 | KIAA1914 {Human (Homo sapiens) [TaxId: 9606]} | 95.71 | |
| d1plsa_ | 113 | Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | 95.69 | |
| d1unqa_ | 118 | Rac-alpha serine/threonine kinase {Human (Homo sap | 95.51 | |
| d1qqga1 | 103 | Insulin receptor substrate 1, IRS-1 {Human (Homo s | 95.51 | |
| d1upqa_ | 107 | Phosphoinositol 3-phosphate binding protein-1, PEP | 95.2 | |
| d1wjma_ | 123 | beta-spectrin {Human (Homo sapiens), brain 2 isofo | 95.16 | |
| d1u5ea1 | 209 | Src-associated adaptor protein Skap2 {Mouse (Mus m | 95.04 | |
| d1wgqa_ | 109 | FYVE, RhoGEF and PH domain containing protein 6, F | 94.91 | |
| d2dyna_ | 111 | Dynamin {Human (Homo sapiens) [TaxId: 9606]} | 94.79 | |
| d1w1ha_ | 147 | 3-phosphoinositide dependent protein kinase-1 {Hum | 93.99 | |
| d1v88a_ | 130 | Oxysterol binding protein-related protein 8 (ORP-8 | 93.98 | |
| d1fgya_ | 127 | Grp1 {Mouse (Mus musculus) [TaxId: 10090]} | 93.37 | |
| d1kz7a2 | 147 | Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId | 93.08 | |
| d2dfka2 | 162 | Rho guanine nucleotide exchange factor 9, Collybis | 93.06 | |
| d1v61a_ | 132 | Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [ | 92.52 | |
| d1btna_ | 106 | beta-spectrin {Mouse (Mus musculus), brain [TaxId: | 92.46 | |
| d1droa_ | 122 | beta-spectrin {Fruit fly (Drosophila melanogaster) | 92.08 | |
| d1ntya2 | 121 | Triple functional domain protein TRIO {Human (Homo | 90.22 | |
| d2j59m1 | 133 | Rho GTPase-activating protein 21 {Human (Homo sapi | 88.97 | |
| d1xcga2 | 140 | Rho guanine nucleotide exchange factor 11, PDZ-Rho | 87.33 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 87.32 | |
| d1txda2 | 114 | Rho guanine nucleotide exchange factor 12 {Human ( | 85.38 | |
| d1zc3b1 | 109 | Exocyst complex protein EXO84 {Rat (Rattus norvegi | 82.59 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 80.06 |
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: RCC1/BLIP-II family: Regulator of chromosome condensation RCC1 domain: Regulator of chromosome condensation RCC1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-54 Score=497.58 Aligned_cols=368 Identities=24% Similarity=0.384 Sum_probs=306.4
Q ss_pred cccCCCCCEEEecCCCCCCcccCCCCCCccccCcccccccccccccCCCCCEEEEEecCceEEEEEcCCcEEEEeCCCCC
Q 001236 234 DDCDALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGG 313 (1117)
Q Consensus 234 ~~~~s~G~Vy~WG~n~~~g~LG~G~~~~~~~~~~~~~~~~P~~l~s~~~~~I~~Ia~G~~Hs~~LT~dG~VyswG~N~~G 313 (1117)
.+++.+|+||+||.| ..||||.|.. ..+...|.+++. ..+|++|+||..|+++|+++|+||+||.|.+|
T Consensus 9 ~~~~~~G~vy~wG~n-~~GqLG~g~~--------~~~~~~P~~v~~--~~~i~~ia~G~~h~~al~~~G~vy~wG~n~~G 77 (401)
T d1a12a_ 9 SHSTEPGLVLTLGQG-DVGQLGLGEN--------VMERKKPALVSI--PEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEG 77 (401)
T ss_dssp TCCCCCBEEEEEEEC-TTSTTCSCTT--------CCEEEEEEEECC--SSCEEEEEECSSEEEEEETTSCEEEEECCTTS
T ss_pred EEECCCCEEEEEeCC-CCCCCCCCCC--------CceeccCEEeCC--CCCeEEEEeCCCEEEEEeCCCEEEEEeCCCCC
Confidence 458999999999998 6899999862 133456666654 34699999999999999999999999999999
Q ss_pred ccCCCCCCceeccEEeccCCCCCeEEEEecCCeEEEEEcCCcEEEEcCCCCCCCccCCCCCcceeeeeeecCCCCCCcEE
Q 001236 314 RLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVA 393 (1117)
Q Consensus 314 QLG~g~~~~~~~P~~V~~l~~~~I~~Va~G~~hs~aLT~dG~VysWG~n~~~~GqLG~g~~~~~~~P~~V~~~l~~~~Iv 393 (1117)
|||++.......|.++......+|++|+||..|+++++++|+||+||.+.+..++++.........+.... ..+.+|+
T Consensus 78 QLG~g~~~~~~~~~~~~~~~~~~i~~i~~g~~~~~~~~~~g~v~~wG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~ 155 (401)
T d1a12a_ 78 ALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQV--QLDVPVV 155 (401)
T ss_dssp TTCSCCCSTTGGGSCEECCCCSCEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESSBBTBCEEEEEEE--CCSSCEE
T ss_pred CCCcccccccccccccccccccceeeecccccceeeccccccceeccccccccccccccCCccccceeeee--ccCCcee
Confidence 99999888777777776666789999999999999999999999999985555666655554443333222 2345899
Q ss_pred EEEecCCeeEEEccCCcEEEEeCCCCCCcCCCCCCC-----------cccceeec-----ccccceEEEEeeCCceEEEE
Q 001236 394 SVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKN-----------VSYPREVE-----SLSGLRTIAVACGVWHTAAV 457 (1117)
Q Consensus 394 ~Va~G~~HtlaLt~dG~Vy~wG~N~~GQLG~g~~~~-----------~~~P~~V~-----~l~~~kI~~VacG~~Ht~aL 457 (1117)
+|+||..|+++++.+|++|+||.|.+||||.+.... ...|..+. .....+|.+|+||..|+++|
T Consensus 156 ~i~~g~~~~~~~~~~g~~~~~G~n~~gqlg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~~v~~g~~~~~~l 235 (401)
T d1a12a_ 156 KVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAI 235 (401)
T ss_dssp EEEECSSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGGGHHHHHSCEECCCBCSSCCSBCCEEEEEEETTEEEEE
T ss_pred EEEecccceeeeecCCcccccccCCccccCCCCccccccCCccccccccccceeeccccCCCCCceEEEEEecCCeEEEE
Confidence 999999999999999999999999999999864321 12343332 23446899999999999999
Q ss_pred EEeeecccccccCCceEEEecCCCCCCCCCCCCCCcccceeecccCC--CCEEEEEecCcEEEEEecCCeEEEEeCCCCC
Q 001236 458 VEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALID--YNFHKVACGHSLTVGLTTSGHVFTMGSTVYG 535 (1117)
Q Consensus 458 ~e~~~~~~~~~t~~G~Ly~WG~n~~GQLG~g~~~~~~~P~~V~~l~~--~~I~~Ia~G~~htlaLT~dG~Vy~wGsN~~G 535 (1117)
+.+|+||+||.|.++++|.........+..+..+.. ..|+.|++|..|+++|+.+|+||+||.|.+|
T Consensus 236 -----------~~~g~v~~~g~n~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~l~~~g~v~~wG~n~~g 304 (401)
T d1a12a_ 236 -----------SHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYG 304 (401)
T ss_dssp -----------ETTCCEEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCEEEEEECSSEEEEEETTSCEEEEECCGGG
T ss_pred -----------ecCCeEeeecccceecccccccccceeccccccccccceeEEEEeeeccceeeeccCCCEEEecccccC
Confidence 459999999999999999998888777777765543 5799999999999999999999999999999
Q ss_pred CCCCCCCCC--CcceeeecccCCCCeEEEEeCCCcceeeecCCeEEEEeCCCCCCCCCCCCCCCcccEEecc--ccCceE
Q 001236 536 QLGNPNADG--KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEA--LKDRHV 611 (1117)
Q Consensus 536 QLG~~~~~~--~~P~~v~~~l~~~~V~~Is~G~~Ht~aLT~dG~Vy~WG~n~~GQLG~G~~~~~~~Pt~V~~--l~~~~V 611 (1117)
|||.+.... ..|..+.. ...|++|+||.+|+++||++|+||+||.|.+||||+|+..++..|++|.. +.+.+|
T Consensus 305 qlG~g~~~~~~~~P~~i~~---~~~i~~Is~G~~hs~alt~dG~v~~WG~n~~GQLG~G~~~~~~~P~~v~~~~~~~~~v 381 (401)
T d1a12a_ 305 RLGLGEGAEEKSIPTLISR---LPAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVV 381 (401)
T ss_dssp TTCSCTTCCCEEEEEECCS---SSSEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCSCEEEEEECCSTTTTTEEE
T ss_pred ccCCCcccccccCCEEcCC---CCCeEEEEeeCCEEEEEeCCCeEEEEecCCCCCCCCCCCCCEecCEEeeccCCCCCEE
Confidence 999875433 35666543 35799999999999999999999999999999999999999999999864 567789
Q ss_pred EEeecCCCcceeEEeee
Q 001236 612 KYIACGSNYSAAICLHK 628 (1117)
Q Consensus 612 ~~VacG~~hT~aL~~~k 628 (1117)
++|+||.+||++|+.++
T Consensus 382 ~~v~~G~~hs~~l~~d~ 398 (401)
T d1a12a_ 382 LSVSSGGQHTVLLVKDK 398 (401)
T ss_dssp EEEEECSSEEEEEEEEC
T ss_pred EEEEEccceEEEEEECC
Confidence 99999999999999763
|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
| >d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
| >d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d2zkmx3 b.55.1.1 (X:11-141) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
| >d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2coaa1 b.55.1.1 (A:8-119) Protein kinase c, d2 type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
| >d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1x1fa1 b.55.1.1 (A:8-143) Signal-transducing adaptor protein 1, STAP-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein APS {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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| >d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2 isoform [TaxId: 9606]} | Back information, alignment and structure |
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| >d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1w1ha_ b.55.1.1 (A:) 3-phosphoinositide dependent protein kinase-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1kz7a2 b.55.1.1 (A:819-965) Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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| >d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain [TaxId: 10090]} | Back information, alignment and structure |
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| >d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
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| >d1ntya2 b.55.1.1 (A:1415-1535) Triple functional domain protein TRIO {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1xcga2 b.55.1.1 (A:942-1081) Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
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| >d1txda2 b.55.1.1 (A:1020-1133) Rho guanine nucleotide exchange factor 12 {Human (Homo sapiens), gamma isoform [TaxId: 9606]} | Back information, alignment and structure |
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| >d1zc3b1 b.55.1.1 (B:171-279) Exocyst complex protein EXO84 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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