Citrus Sinensis ID: 001322

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100

MASEDSIPGVGLRYVQMQQETSSFFTSVGSGPEPEPARIFDELPKASIVSVSRPDAGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGDHMAVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGRQHSMSDRAKVAMQQYLNHFLGNMDIVNSREVCKFLEASKLSFSPEYGPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAGLRPPEGWCHPHRFGSFAPPRGMTDDGSQAQWFVDGKAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFHNHASSRLDALLEAKAKQGVQIYILLYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFASGVYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTFEHKIGDNPPLIWPGKDYYNPRESEPNSWEDTMRDELDRGKYPRMPWHDIHCALWGPPCRDVARHFVQRWNYAKRNKAPNEETIPLLMPQHQMVIPHYMGRSREVEVESKNVEDNSKSIKRQDSFTFRSSLQDIPLLLPQEPEVLDDSSRGLIPNGLDYTTTKSASFRYQKAKIEPVVTDMPMKGFVDDRDSPHHHLKTSLDVMTLPGTKSSDIEWWETQERGDQVGSTDETGQVGPRASCRCQIIRSVSQWSAGTSQLEESIHCAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPLLPGFQGGVDDGGAASVRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLRAYGRLFEDGPVATSQVYVHSKVMIIDDSIALIGSANINDRSLLGSRDSEIGVLIEDKESVDSFMGGKPWKAGKLCLSLRLSLWSEHLGLRSREVNQIIDPVIDSTYKDIWVATARMNTTIYQDVFSCVPNDLIHTRAAIRQNIAFWKEKLGHTTIDLGIAPRNLESYQNGDIQKTDPLERLQAVRGHLVSFPLDFMCKEDLRPVFNESEYYAAQVFY

cccccccccccccEEEccccccccccccccccccccccccccccEEEEEEEEccccccccccEEEEEEEEEEEEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccccccccccccccEEEEEEEEcccccccccccccccccccccccccccEEEEEEcccEEEEEEccccccccEEEEEccccccccccccccccHHHHHcccccccccEEEccEEEEEEEcccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccEEEccHHHHHHHHHHHHHHcccEEEEEEEEEccEEEEccccccccccHHHHHHHHHHHcccEEEEEEccHHHHHHHccccHHHHHHHHccccccEEEccccccccccEEcccccEEEEcccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccccccccccccEEEEccEEEEEccEEEEEccccccccccccccccccEEEcccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccHHccHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHccccEEEEEccccHHHHccccccccccccccccccc

cccccccccccccEEEccccHHHHHccccccccccccEHcccccEEEEEEEEcccccccccccEEEEEEEEcccEEEEEEEcHHHHHHHHHHHHHHHHHHcccccccccEEHHHccccccccccccccccccccccccccccccccccccccccccccHccccHHHHHHHHHHHHHHHHHHHccccHccccHHHEHEEcccccccHcccccccccEEEEEcccccEEEccccccEEEEEEEEEccccccEEEEEEccEEEEEccccccEEEEEEEEcccHHHccccEEEEEEEEcccccccccccEEEEcccEEEEEEEccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHEEccHHHHHHHHHHHHHHHcEEEEEccEEcccEEEEccccccccccHHHHHHHHHHcccEEEEEEEccccEEEEcccccccccHHcccccEEEEcccccccccEEEEEcccEEEEEEcEEEEEcccEcccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHcccccccHHcccHcccccccccHHHcccccccccccccccccccccccccEEEEEcccccccccccccccHHHHHHHcccccccccEEEccccccccEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHcHHHHHHcHccccccccccccccccccEEEEEEEEccccccccccccHHHHHHHHHHHHHHcccEEEEEcEEEEccccccHHHHcHHHHHHHHHHHHHHHccccEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHEEEEEcccccccccccccEEEEEEEEcEEEEEcccEEEEEEccccccccccccccEEEEEEEccccHHHHccccccccccHHHHHHHHHHHHHHcccccccHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccccccHHcccHHHHHcccccccccccHHHHHHHHcccEEEccHHHHHHccccccccccEEcccHHcc

masedsipgvGLRYVQMQQETSsfftsvgsgpepeparifdelpkasivsvsrpdagdispmLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQnlgmgdhmavvqeddegdeiavnhdesskkrdvpanaalpvirpalgrqhsmSDRAKVAMQQYLNHFLGNMDIVNSREVCKFLEAsklsfspeygpklkeDYVMAKhlpkisrnddsrkccccplftccndnWQKVWAVLKPGFlalladpfdtkpmdiivfdvlpasdgngegRVSLATEvkernplrhafKVTCgvrsirlrtrtgaKVRDWVAAINdaglrppegwchphrfgsfapprgmtddgsqaqwfVDGKAAFEAIASSIEDAKSeificgwwlcpelylrrpfhnhaSSRLDALLEAKAKQGVQIYILLYKEVALALKINSVYSKRKLLsihenvrvlrypdhfasGVYLWSHHEKLVIVDYQICFiggldlcfgrydtfehkigdnppliwpgkdyynpresepnswedtmrdeldrgkyprmpwhdihcalwgppcrdVARHFVQRWNYakrnkapneetipllmpqhqmviphymgrsrEVEVEsknvednsksikrqdsftfrsslqdiplllpqepevlddssrglipngldytttksasfryqkakiepvvtdmpmkgfvddrdsphhhlktsldvmtlpgtkssdiewwetqergdqvgstdetgqvgprascrcqiIRSVSQWSAGTSQLEESIHCAYCSLIEKAEHFIYIENqffisglsgdEIIRNRVLESLYRRILRAYNEKKCFRVIIVIpllpgfqggvddggAASVRAIMHWQYRTICRGQNSILHNLYallgpkthdyisFYGLRaygrlfedgpvatsqvyVHSKVMIIDDSIALIgsanindrsllgsrdseigvliedkesvdsfmggkpwkagKLCLSLRLSLWSehlglrsrevnqiidpvidsTYKDIWVATARMNTTIYQDvfscvpndlIHTRAAIRQNIAFWKEKLghttidlgiaprnlesyqngdiqktdplERLQAVRGHLvsfpldfmckedlrpvfneseYYAAQVFY

MASEDSIPGVGLRYVQMQQETSSFFTSVGSGPEPEPARIFDELPKASIVSVSRPDAGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGDHMAVVQEDDEGDEIAVNHdesskkrdvpanaalpvirpalgrqhSMSDRAKVAMQQYLNHFLGNMDIVNSREVCKFLEASklsfspeygpKLKEDYVMAKHLPkisrnddsrKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRVSLatevkernplrhafkvtcgvrsirlrtrtgakvrdWVAAINDAGLRPPEGWCHPHRFGSFAPPRGMTDDGSQAQWFVDGKAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFHNHASSRLDALLEAKAKQGVQIYILLYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFASGVYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTFEhkigdnppliwpgkdyynpresepnswedtmRDELDRGKYPRMPWHDIHCALWGPPCRDVARHFVQRWNYAKrnkapneetipllmpqhQMVIPHYMGRSREVEVesknvednsksikrqdsftfrssLQDIPLLLPQEPEVlddssrglipngldytttksasfryqkakiepvvtdmPMKGFVDDRDSPHHHLktsldvmtlpgtKSSDIEWWETqergdqvgstdetgqvgprasCRCQIIRSVSQWSAGTSQLEESIHCAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPLLPGFQGGVDDGGAASVRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLRAYGRLFEDGPVATSQVYVHSKVMIIDDSIALIGSAnindrsllgsrdSEIGVLIEDKESVDSFMGGKPWKAGKLCLSLRLSLWSEHLGlrsrevnqiidpviDSTYKDIWVATARMNTTIYQDVFSCVPNDLIHTRAAIRQNIAFWKEKLGHTTIDLGIAPRNLESYQNGDIQKTDPLERLQAVRGHLVSFPLDFMCKEDLRPVFNESEYYAAQVFY

MASEDSIPGVGLRYVQMQQETSSFFTSVGSGPEPEPARIFDELPKASIVSVSRPDAGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFeeiqekqeqvkeWLQNLGMGDHMAVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGRQHSMSDRAKVAMQQYLNHFLGNMDIVNSREVCKFLEASKLSFSPEYGPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAGLRPPEGWCHPHRFGSFAPPRGMTDDGSQAQWFVDGKAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFHNHASSRLDALLEAKAKQGVQIYILLYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFASGVYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTFEHKIGDNPPLIWPGKDYYNPRESEPNSWEDTMRDELDRGKYPRMPWHDIHCALWGPPCRDVARHFVQRWNYAKRNKAPNEETIPLLMPQHQMVIPHYMGRSREVEVESKNVEDNSKSIKRQDSFTFRSSLQDIPLLLPQEPEVLDDSSRGLIPNGLDYTTTKSASFRYQKAKIEPVVTDMPMKGFVDDRDSPHHHLKTSLDVMTLPGTKSSDIEWWETQERGDQVGSTDETGQVGPRASCRCQIIRSVSQWSAGTSQLEESIHCAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPLLPGFQGGVDDGGAASVRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLRAYGRLFEDGPVATSQVYVHSKVMIIDDSIALIGSANINDRSLLGSRDSEIGVLIEDKESVDSFMGGKPWKAGKLCLSLRLSLWSEHLGLRSREVNQIIDPVIDSTYKDIWVATARMNTTIYQDVFSCVPNDLIHTRAAIRQNIAFWKEKLGHTTIDLGIAPRNLESYQNGDIQKTDPLERLQAVRGHLVSFPLDFMCKEDLRPVFNESEYYAAQVFY

********************************************************GDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGDHMA***********************************************KVAMQQYLNHFLGNMDIVNSREVCKFLEASKLSFSPEYGPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPAS*******VSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAGLRPPEGWCHPHRFGSFA**********QAQWFVDGKAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFHNHASSRLDALLEAKAKQGVQIYILLYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFASGVYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTFEHKIGDNPPLIWPGKDYY*********************KYPRMPWHDIHCALWGPPCRDVARHFVQRWNYAKRN*******IPLLMPQHQMVIPHY********************************************************NGLDYTTT**ASFRYQKAKIEPVVT**********************************IEWW*********************ASCRCQIIRSVSQWSAGTSQLEESIHCAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPLLPGFQGGVDDGGAASVRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLRAYGRLFEDGPVATSQVYVHSKVMIIDDSIALIGSANINDRSLLGSRDSEIGVLIEDKESVDSFMGGKPWKAGKLCLSLRLSLWSEHLGLRSREVNQIIDPVIDSTYKDIWVATARMNTTIYQDVFSCVPNDLIHTRAAIRQNIAFWKEKLGHTTIDLGIAPRNLESYQNGDIQKTDPLERLQAVRGHLVSFPLDFMCKEDLRPVFNESEYYAAQV**

********************************EPEPARIFDELPKASIVSVSRP**G*ISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFF*************************************************************************AMQQYLNHFLGNMDIVNSREVCKFLEASKLSFSPEYGPKLKEDYVMAKHL*****NDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPAS*****************NPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAGLRPPEGWCHPHRFGSFAPPRGMTDDGSQAQWFVDGKAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFHNHASSRLDALLEAKAKQGVQIYILLYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFASGVYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTFEHKIGDNPPLIWPGKDYYNPRESEPNSWEDTMRDELDRGKYPRMPWHDIHCALWGPPCRDVARHFVQRWNYAKRNKAPNEETIPLLMPQHQMVIPHYMGRSREVEVESKNVEDNSKSIKRQDSFTFRSSLQDIPLLLPQEPEVLDDSSRGLIPNGLDYTTTKSASFRYQKAKIEPVVTDMPMKGFVDDRDSPHHHLKTSLDVMTLPGTKSSDIEWWETQE*************VGPRASCRCQIIRSVSQWSAGTSQLEESIHCAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPLLPGFQGGVDDGGAASVRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLRAYGRLFEDGPVATSQVYVHSKVMIIDDSIALIGSANINDRSL*GSRDSEIGVLIEDKESV*****G*PWKAGKLCLSLRLSLWSEHLGLRSREVNQIIDPVIDSTYKDIWVATARMNTTIYQDVFSCVPNDLIHTRAAIRQNIAFWK***************************TDPLERLQAVRGHLVSFPLDFMCKEDLRPVFNESEYYAAQVFY

MASEDSIPGVGLRYVQMQQETSS***********EPARIFDELPKASIVSVSRPDAGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGDHMAVVQEDDEGDEIAVN*********VPANAALPVIRPALGRQHSMSDRAKVAMQQYLNHFLGNMDIVNSREVCKFLEASKLSFSPEYGPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAGLRPPEGWCHPHRFGSFAPPRGMTDDGSQAQWFVDGKAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFHNHASSRLDALLEAKAKQGVQIYILLYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFASGVYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTFEHKIGDNPPLIWPGKDYYNPRESEPNSWEDTMRDELDRGKYPRMPWHDIHCALWGPPCRDVARHFVQRWNYAKRNKAPNEETIPLLMPQHQMVIPHYMGRSR**************SIKRQDSFTFRSSLQDIPLLLPQEPEVLDDSSRGLIPNGLDYTTTKSASFRYQKAKIEPVVTDMPMKGFVDDRDSPHHHLKTSLDVMTLPGTKSSDIEWWET******************RASCRCQIIRSVSQWSAGTSQLEESIHCAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPLLPGFQGGVDDGGAASVRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLRAYGRLFEDGPVATSQVYVHSKVMIIDDSIALIGSANINDRSLLGSRDSEIGVLIEDKESVDSFMGGKPWKAGKLCLSLRLSLWSEHLGLRSREVNQIIDPVIDSTYKDIWVATARMNTTIYQDVFSCVPNDLIHTRAAIRQNIAFWKEKLGHTTIDLGIAPRNLESYQNGDIQKTDPLERLQAVRGHLVSFPLDFMCKEDLRPVFNESEYYAAQVFY

************RYVQMQQETSSFFTSVGSGPEPEPARIFDELPKASIVSVSRPDAGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLG***************************************RPALGRQHSMSDRAKVAMQQYLNHFLGNMDIVNSREVCKFLEASKLSFSPEYGPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAGLRPPEGWCHPHRFGSFAPPRGMTDDGSQAQWFVDGKAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFHNHASSRLDALLEAKAKQGVQIYILLYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFASGVYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTFEHKIGDNPPLIWPGKDYYNPRESEPNSWEDTMRDELDRGKYPRMPWHDIHCALWGPPCRDVARHFVQRWNYAKRNKAPNEETIPLLMPQHQMVIPHYMGRSREVEVES****DNSKSIKRQDSFTFRSSLQDIPLLLPQEPEVLDDSSRGLIPNGLDYTTTKSASFRYQKAKIEPVVTDMPMKGFVDDRDSPHHHLKTSLDVMTLPGTKSSDIEWWETQERGDQVGSTDETGQVGPRASCRCQIIRSVSQWSAGTSQLEESIHCAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPLLPGFQGGVDDGGAASVRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLRAYGRLFEDGPVATSQVYVHSKVMIIDDSIALIGSANINDRSLLGSRDSEIGVLIEDKESVDSFMGGKPWKAGKLCLSLRLSLWSEHLGLRSREVNQIIDPVIDSTYKDIWVATARMNTTIYQDVFSCVPNDLIHTRAAIRQNIAFWKEKLGHTTIDLGIAPRNLESYQNGDIQKTDPLERLQAVRGHLVSFPLDFMCKEDLRPVFNESEYYAAQVFY

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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MASEDSIPGVGLRYVQMQQETSSFFTSVGSGPEPEPARIFDELPKASIVSVSRPDAGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKxxxxxxxxxxxxxxxxxxxxxLGMGDHMAVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGRQHSMSDRAKVAMQQYLNHFLGNMDIVNSREVCKFLEASKLSFSPEYGPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAGLRPPEGWCHPHRFGSFAPPRGMTDDGSQAQWFVDGKAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFHNHASSRLDALLEAKAKQGVQIYILLYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFASGVYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTFEHKIGDNPPLIWPGKDYYNPRESEPNSWEDTMRDELDRGKYPRMPWHDIHCALWGPPCRDVARHFVQRWNYAKRNKAPNEETIPLLMPQHQMVIPHYMGRSREVEVESKNVEDNSKSIKRQDSFTFRSSLQDIPLLLPQEPEVLDDSSRGLIPNGLDYTTTKSASFRYQKAKIEPVVTDMPMKGFVDDRDSPHHHLKTSLDVMTLPGTKSSDIEWWETQERGDQVGSTDETGQVGPRASCRCQIIRSVSQWSAGTSQLEESIHCAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPLLPGFQGGVDDGGAASVRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLRAYGRLFEDGPVATSQVYVHSKVMIIDDSIALIGSANINDRSLLGSRDSEIGVLIEDKESVDSFMGGKPWKAGKLCLSLRLSLWSEHLGLRSREVNQIIDPVIDSTYKDIWVATARMNTTIYQDVFSCVPNDLIHTRAAIRQNIAFWKEKLGHTTIDLGIAPRNLESYQNGDIQKTDPLERLQAVRGHLVSFPLDFMCKEDLRPVFNESEYYAAQVFY

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		1100	2.2.26 [Sep-21-2011]
Q9LRZ5		1096	Phospholipase D p1 OS=Ara	yes	no	0.987	0.990	0.756	0.0
Q9M9W8		1046	Phospholipase D p2 OS=Ara	no	no	0.900	0.947	0.628	0.0
Q13393		1074	Phospholipase D1 OS=Homo	yes	no	0.3	0.307	0.430	2e-78
P70496		1074	Phospholipase D1 OS=Rattu	yes	no	0.3	0.307	0.438	3e-78
Q9Z280		1074	Phospholipase D1 OS=Mus m	yes	no	0.3	0.307	0.438	3e-78
O08684		1036	Phospholipase D1 OS=Crice	yes	no	0.3	0.318	0.433	1e-77
Q0V8L6		933	Phospholipase D2 OS=Bos t	no	no	0.289	0.340	0.432	2e-70
P97813		933	Phospholipase D2 OS=Mus m	no	no	0.297	0.350	0.419	7e-70
O14939		933	Phospholipase D2 OS=Homo	no	no	0.295	0.348	0.422	7e-70
P70498		933	Phospholipase D2 OS=Rattu	no	no	0.291	0.344	0.426	1e-69

>sp\|Q9LRZ5\|PLDP1_ARATH Phospholipase D p1 OS=Arabidopsis thaliana GN=PLDP1 PE=2 SV=1	Back alignment and function desciption

 Score = 1663 bits (4306), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 840/1110 (75%), Positives = 944/1110 (85%), Gaps = 24/1110 (2%)

Query: 1    MASED--SIPGVGLRYVQMQQE-----TSSFFTSVGSGPEPEPARIFDELPKASIVSVSR 53
            MASE   S    G RY QMQ E      SS F S    P  E  RIF+ELPKA IVSVSR
Sbjct: 1    MASEQLMSPASGGGRYFQMQPEQFPSMVSSLF-SFAPAPTQETNRIFEELPKAVIVSVSR 59

Query: 54   PDAGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWL 113
            PDAGDISP+LLSYTIE QYKQFKW+LVKKASQVFYLHFALK+RAF EEI EKQEQVKEWL
Sbjct: 60   PDAGDISPVLLSYTIECQYKQFKWQLVKKASQVFYLHFALKKRAFIEEIHEKQEQVKEWL 119

Query: 114  QNLGMGDHMAVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGRQHSMSDRAKVA 173
            QNLG+GDH  VVQ++D  DE+ ++ DES+K RDVP++AALPVIRP LGRQ S+S R K A
Sbjct: 120  QNLGIGDHPPVVQDED-ADEVPLHQDESAKNRDVPSSAALPVIRP-LGRQQSISVRGKHA 177

Query: 174  MQQYLNHFLGNMDIVNSREVCKFLEASKLSFSPEYGPKLKEDYVMAKHLPKISR-NDDSR 232
            MQ+YLNHFLGN+DIVNSREVC+FLE S LSFSPEYGPKLKEDY+M KHLPK S+ +DDS 
Sbjct: 178  MQEYLNHFLGNLDIVNSREVCRFLEVSMLSFSPEYGPKLKEDYIMVKHLPKFSKSDDDSN 237

Query: 233  KCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRVSL 292
            +CC C  F CCNDNWQKVW VLKPGFLALL DPFD K +DIIVFDVLP S+GN    +SL
Sbjct: 238  RCCGCCWFCCCNDNWQKVWGVLKPGFLALLEDPFDAKLLDIIVFDVLPVSNGNDGVDISL 297

Query: 293  ATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAGLRPPEGWCHPHRFGSF 352
            A E+K+ NPLRHAFKVT G RSIR+R +  AKV+DWVA+INDA LRPPEGWCHPHRFGS+
Sbjct: 298  AVELKDHNPLRHAFKVTSGNRSIRIRAKNSAKVKDWVASINDAALRPPEGWCHPHRFGSY 357

Query: 353  APPRGMTDDGSQAQWFVDGKAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFHNHASS 412
            APPRG+TDDGSQAQWFVDG AAF AIA++IE+AKSEIFICGWW+CPELYLRRPF  H SS
Sbjct: 358  APPRGLTDDGSQAQWFVDGGAAFAAIAAAIENAKSEIFICGWWVCPELYLRRPFDPHTSS 417

Query: 413  RLDALLEAKAKQGVQIYILLYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFASGVY 472
            RLD LLE KAKQGVQIYIL+YKEVALALKINSVYSKR+LL IHENVRVLRYPDHF+SGVY
Sbjct: 418  RLDNLLENKAKQGVQIYILIYKEVALALKINSVYSKRRLLGIHENVRVLRYPDHFSSGVY 477

Query: 473  LWSHHEKLVIVDYQICFIGGLDLCFGRYDTFEHKIGDNPPLIWPGKDYYNPRESEPNSWE 532
            LWSHHEKLVIVD Q+CFIGGLDLCFGRYDTFEHK+GDNP + WPGKDYYNPRESEPN+WE
Sbjct: 478  LWSHHEKLVIVDNQVCFIGGLDLCFGRYDTFEHKVGDNPSVTWPGKDYYNPRESEPNTWE 537

Query: 533  DTMRDELDRGKYPRMPWHDIHCALWGPPCRDVARHFVQRWNYAKRNKAPNEETIPLLMPQ 592
            D ++DEL+R K+PRMPWHD+HCALWGPPCRDVARHFVQRWNYAKRNKAP E++IPLLMPQ
Sbjct: 538  DALKDELERKKHPRMPWHDVHCALWGPPCRDVARHFVQRWNYAKRNKAPYEDSIPLLMPQ 597

Query: 593  HQMVIPHYMGRSREVEVESKNVEDNSKSIKRQDSFTFRSSLQDIPLLLPQEPEVLDDSSR 652
            H MVIPHYMGR  E ++ESK  ED+ + I+R DSF+ RSSLQDIPLLLP EP   D SS 
Sbjct: 598  HHMVIPHYMGRQEESDIESKKEEDSIRGIRRDDSFSSRSSLQDIPLLLPHEPVDQDGSSG 657

Query: 653  GLIPNGLDYTTTKSASFRYQKAKIEPVVTDMPMKGFVDDRDSPHHHLKTSLDV-MTLPGT 711
            G   NG   T  ++  F ++K+KIEPV  D PM+GFVDDR+         LD+ +   G+
Sbjct: 658  GHKENG---TNNRNGPFSFRKSKIEPVDGDTPMRGFVDDRN--------GLDLPVAKRGS 706

Query: 712  KSSDIEWWETQERGDQVGSTDETGQVGPRASCRCQIIRSVSQWSAGTSQLEESIHCAYCS 771
             + D EWWETQ+   QVGS DETGQVGPR SCRCQIIRSVSQWSAGTSQ+EESIH AY S
Sbjct: 707  NAIDSEWWETQDHDYQVGSPDETGQVGPRTSCRCQIIRSVSQWSAGTSQVEESIHSAYRS 766

Query: 772  LIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPLLPGF 831
            LI+KAEHFIYIENQFFISGLSGD+ ++NRVLE+LY+RILRA+NEKK FRV++VIPLLPGF
Sbjct: 767  LIDKAEHFIYIENQFFISGLSGDDTVKNRVLEALYKRILRAHNEKKIFRVVVVIPLLPGF 826

Query: 832  QGGVDDGGAASVRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLRAYGRLFED 891
            QGG+DD GAASVRAIMHWQYRTI RG NSIL NLY  +G K HDYISFYGLRAYG+L ED
Sbjct: 827  QGGIDDSGAASVRAIMHWQYRTIYRGHNSILTNLYNTIGVKAHDYISFYGLRAYGKLSED 886

Query: 892  GPVATSQVYVHSKVMIIDDSIALIGSANINDRSLLGSRDSEIGVLIEDKESVDSFMGGKP 951
            GPVATSQVYVHSK+MI+DD  ALIGSANINDRSLLGSRDSEIGVLIED E VDS M GKP
Sbjct: 887  GPVATSQVYVHSKIMIVDDRAALIGSANINDRSLLGSRDSEIGVLIEDTELVDSRMAGKP 946

Query: 952  WKAGKLCLSLRLSLWSEHLGLRSREVNQIIDPVIDSTYKDIWVATARMNTTIYQDVFSCV 1011
            WKAGK   SLRLSLWSEHLGLR+ E++QIIDPV DSTYK+IW+ATA+ NT IYQDVFSCV
Sbjct: 947  WKAGKFSSSLRLSLWSEHLGLRTGEIDQIIDPVSDSTYKEIWMATAKTNTMIYQDVFSCV 1006

Query: 1012 PNDLIHTRAAIRQNIAFWKEKLGHTTIDLGIAPRNLESYQNGDIQKTDPLERLQAVRGHL 1071
            PNDLIH+R A RQ++++WKEKLGHTTIDLGIAP  LESY NGDI+++DP++RL+A++GHL
Sbjct: 1007 PNDLIHSRMAFRQSLSYWKEKLGHTTIDLGIAPEKLESYHNGDIKRSDPMDRLKAIKGHL 1066

Query: 1072 VSFPLDFMCKEDLRPVFNESEYYAA-QVFY 1100
            VSFPLDFMCKEDLRPVFNESEYYA+ QVF+
Sbjct: 1067 VSFPLDFMCKEDLRPVFNESEYYASPQVFH 1096

Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. Phosphatidylcholine-selective.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 4EC: .EC: 4

>sp\|Q9M9W8\|PLDP2_ARATH Phospholipase D p2 OS=Arabidopsis thaliana GN=PLDP2 PE=2 SV=2	Back alignment and function description

>sp\|Q13393\|PLD1_HUMAN Phospholipase D1 OS=Homo sapiens GN=PLD1 PE=1 SV=1	Back alignment and function description

>sp\|P70496\|PLD1_RAT Phospholipase D1 OS=Rattus norvegicus GN=Pld1 PE=1 SV=3	Back alignment and function description

>sp\|Q9Z280\|PLD1_MOUSE Phospholipase D1 OS=Mus musculus GN=Pld1 PE=1 SV=1	Back alignment and function description

>sp\|O08684\|PLD1_CRIGR Phospholipase D1 OS=Cricetulus griseus GN=PLD1 PE=2 SV=1	Back alignment and function description

>sp\|Q0V8L6\|PLD2_BOVIN Phospholipase D2 OS=Bos taurus GN=PLD2 PE=2 SV=1	Back alignment and function description

>sp\|P97813\|PLD2_MOUSE Phospholipase D2 OS=Mus musculus GN=Pld2 PE=1 SV=2	Back alignment and function description

>sp\|O14939\|PLD2_HUMAN Phospholipase D2 OS=Homo sapiens GN=PLD2 PE=1 SV=2	Back alignment and function description

>sp\|P70498\|PLD2_RAT Phospholipase D2 OS=Rattus norvegicus GN=Pld2 PE=1 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1100
255551857		1117	phospholipase d zeta, putative [Ricinus	0.986	0.971	0.813	0.0
225431806		1098	PREDICTED: phospholipase D p1-like [Viti	0.990	0.992	0.795	0.0
224130480		1096	predicted protein [Populus trichocarpa]	0.971	0.975	0.814	0.0
224110328		1120	predicted protein [Populus trichocarpa]	0.988	0.970	0.792	0.0
449464746		1113	PREDICTED: phospholipase D p1-like [Cucu	0.997	0.985	0.769	0.0
356556110		1123	PREDICTED: phospholipase D p1-like [Glyc	0.997	0.976	0.759	0.0
356532545		1126	PREDICTED: phospholipase D p1-like [Glyc	0.997	0.974	0.756	0.0
296083321		1121	unnamed protein product [Vitis vinifera]	0.955	0.937	0.741	0.0
297830290		1097	hypothetical protein ARALYDRAFT_897998 [	0.987	0.989	0.761	0.0
22331122		1096	phospholipase D P1 [Arabidopsis thaliana	0.987	0.990	0.756	0.0

>gi\|255551857\|ref\|XP_002516974.1\| phospholipase d zeta, putative [Ricinus communis] gi\|223544062\|gb\|EEF45588.1\| phospholipase d zeta, putative [Ricinus communis]	Back alignment and taxonomy information

 Score = 1860 bits (4818), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 903/1110 (81%), Positives = 986/1110 (88%), Gaps = 25/1110 (2%)

Query: 11   GLRYVQMQQETSS------------------FFTSVGSGPEPEPARIFDELPKASIVSVS 52
            G RYVQMQ E S+                   F S   G  PE  RIFDELP A+IVSVS
Sbjct: 13   GPRYVQMQSEPSTPQHNQQQLQQQHPSSMLSSFFSFTHGVTPESTRIFDELPTATIVSVS 72

Query: 53   RPDAGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEW 112
            RPDAGDISP+LL+YTIE     FKW+L KKA+QVFYLHFALKRRAFFEEI EKQEQVKEW
Sbjct: 73   RPDAGDISPVLLTYTIE-----FKWQLSKKAAQVFYLHFALKRRAFFEEIHEKQEQVKEW 127

Query: 113  LQNLGMGDHMAVVQEDDEG--DEIAVNHDESSKKRDVPANAALPVIRPALGRQHSMSDRA 170
            LQNLG+GDH  VVQ+DD+   + I ++++ES+K R+VP+ AALPVIRPALGRQHSMSDRA
Sbjct: 128  LQNLGIGDHTPVVQDDDDADDETILLHNEESAKNRNVPSRAALPVIRPALGRQHSMSDRA 187

Query: 171  KVAMQQYLNHFLGNMDIVNSREVCKFLEASKLSFSPEYGPKLKEDYVMAKHLPKISRNDD 230
            KVAMQ+YLNHFLGN+DIVNSREVCKFLE SKLSFS EYGPKLKEDYVMA+HLP I  NDD
Sbjct: 188  KVAMQEYLNHFLGNLDIVNSREVCKFLEVSKLSFSLEYGPKLKEDYVMARHLPPIPTNDD 247

Query: 231  SRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRV 290
            S KCC C  F+CCNDNWQKVWAVLKPGFLALLADPFD KP+DIIVFDVLPASDG+GEGR+
Sbjct: 248  SGKCCACHWFSCCNDNWQKVWAVLKPGFLALLADPFDAKPLDIIVFDVLPASDGSGEGRI 307

Query: 291  SLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAGLRPPEGWCHPHRFG 350
            SLA E KERNPLRHAFKVTCGVRSI+LRT+TGA+V+DWVAAINDAGLRPPEGWCHPHRFG
Sbjct: 308  SLAMETKERNPLRHAFKVTCGVRSIKLRTKTGARVKDWVAAINDAGLRPPEGWCHPHRFG 367

Query: 351  SFAPPRGMTDDGSQAQWFVDGKAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFHNHA 410
            SFAPPRG+T+DGSQAQWF+DG AAF+AIASSIEDAKSEIFICGWWLCPELYLRRPFH HA
Sbjct: 368  SFAPPRGLTEDGSQAQWFIDGMAAFDAIASSIEDAKSEIFICGWWLCPELYLRRPFHAHA 427

Query: 411  SSRLDALLEAKAKQGVQIYILLYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFASG 470
            SSRLD LLEAKAKQGVQIYILLYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHF+SG
Sbjct: 428  SSRLDDLLEAKAKQGVQIYILLYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFSSG 487

Query: 471  VYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTFEHKIGDNPPLIWPGKDYYNPRESEPNS 530
            VYLWSHHEKLVIVDYQICFIGGLDLCFGRYDT EH++GD PP +WPGKDYYNPRESEPNS
Sbjct: 488  VYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTREHRVGDCPPFVWPGKDYYNPRESEPNS 547

Query: 531  WEDTMRDELDRGKYPRMPWHDIHCALWGPPCRDVARHFVQRWNYAKRNKAPNEETIPLLM 590
            WEDTM+DELDR KYPRMPWHD+HCALWGPPCRDVARHFVQRWNYAKRNKAP EE IPLLM
Sbjct: 548  WEDTMKDELDRKKYPRMPWHDVHCALWGPPCRDVARHFVQRWNYAKRNKAPYEEAIPLLM 607

Query: 591  PQHQMVIPHYMGRSREVEVESKNVEDNSKSIKRQDSFTFRSSLQDIPLLLPQEPEVLDDS 650
            PQH MVIPHY G S+++EVE+KN ED+SK IKR+DSF+ RSSLQDIPLLLPQE E  D S
Sbjct: 608  PQHHMVIPHYRGSSKDLEVETKNGEDDSKGIKREDSFSSRSSLQDIPLLLPQEAEGTDGS 667

Query: 651  SRGLIPNGLDYTTTKSASFRYQKAKIEPVVTDMPMKGFVDDRDSPHHHLKTSLDVMTLPG 710
             RG   NGLD T  +S S+ ++K+K E VV D PMKGFVDD +    H+K S D++   G
Sbjct: 668  GRGPKLNGLDSTPGRSRSYAFRKSKFEAVVPDTPMKGFVDDHNILDLHVKISPDILPQSG 727

Query: 711  TKSSDIEWWETQERGDQVGSTDETGQVGPRASCRCQIIRSVSQWSAGTSQLEESIHCAYC 770
            TK+S +EWWETQERGDQVG  DETGQVGPR SCRCQ+IRSVSQWSAGTSQ+EESIHCAY 
Sbjct: 728  TKTSHLEWWETQERGDQVGFGDETGQVGPRTSCRCQVIRSVSQWSAGTSQVEESIHCAYR 787

Query: 771  SLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPLLPG 830
            SLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRI+RA+NEKKCFRVIIVIPL+PG
Sbjct: 788  SLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRIMRAHNEKKCFRVIIVIPLIPG 847

Query: 831  FQGGVDDGGAASVRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLRAYGRLFE 890
            FQGG+DD GAASVRAIMHWQYRTICRGQNSI HNLY +LGPKTHDYISFYGLRAYG+LF+
Sbjct: 848  FQGGLDDSGAASVRAIMHWQYRTICRGQNSIFHNLYDVLGPKTHDYISFYGLRAYGKLFD 907

Query: 891  DGPVATSQVYVHSKVMIIDDSIALIGSANINDRSLLGSRDSEIGVLIEDKESVDSFMGGK 950
             GPVATSQVYVHSK+MIIDD   LIGSANINDRSLLGSRDSEI VLIEDKE VDSFMGG+
Sbjct: 908  GGPVATSQVYVHSKIMIIDDCATLIGSANINDRSLLGSRDSEIAVLIEDKEMVDSFMGGR 967

Query: 951  PWKAGKLCLSLRLSLWSEHLGLRSREVNQIIDPVIDSTYKDIWVATARMNTTIYQDVFSC 1010
             WKAGK  LSLRLSLWSEHLGL ++E+ QIIDPVIDSTYKDIW+ATA+ NTTIYQDVFSC
Sbjct: 968  HWKAGKFSLSLRLSLWSEHLGLNAKEMKQIIDPVIDSTYKDIWIATAKTNTTIYQDVFSC 1027

Query: 1011 VPNDLIHTRAAIRQNIAFWKEKLGHTTIDLGIAPRNLESYQNGDIQKTDPLERLQAVRGH 1070
            +PNDL+H+RAA+RQN+AFWKE+LGHTTIDLGIAP  LESY+NGDI+K DP+ERLQAVRGH
Sbjct: 1028 IPNDLMHSRAALRQNMAFWKERLGHTTIDLGIAPEKLESYENGDIKKHDPMERLQAVRGH 1087

Query: 1071 LVSFPLDFMCKEDLRPVFNESEYYAAQVFY 1100
            LVSFPLDFMC+EDLRPVFNESEYYA+QVFY
Sbjct: 1088 LVSFPLDFMCREDLRPVFNESEYYASQVFY 1117

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|225431806\|ref\|XP_002272864.1\| PREDICTED: phospholipase D p1-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224130480\|ref\|XP_002328619.1\| predicted protein [Populus trichocarpa] gi\|222838601\|gb\|EEE76966.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|224110328\|ref\|XP_002315486.1\| predicted protein [Populus trichocarpa] gi\|222864526\|gb\|EEF01657.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|449464746\|ref\|XP_004150090.1\| PREDICTED: phospholipase D p1-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356556110\|ref\|XP_003546370.1\| PREDICTED: phospholipase D p1-like [Glycine max]	Back alignment and taxonomy information

>gi\|356532545\|ref\|XP_003534832.1\| PREDICTED: phospholipase D p1-like [Glycine max]	Back alignment and taxonomy information

>gi\|296083321\|emb\|CBI22957.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|297830290\|ref\|XP_002883027.1\| hypothetical protein ARALYDRAFT_897998 [Arabidopsis lyrata subsp. lyrata] gi\|297328867\|gb\|EFH59286.1\| hypothetical protein ARALYDRAFT_897998 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi|22331122|ref|NP_188302.2| phospholipase D P1 [Arabidopsis thaliana] gi|20139230|sp|Q9LRZ5.1|PLDP1_ARATH RecName: Full=Phospholipase D p1; Short=AtPLDp1; AltName: Full=Phospholipase D zeta 1; Short=PLDzeta1; AltName: Full=Phospholipase D1 PHOX and PX-containing domain protein gi|15723315|gb|AAL06337.1|AF411833_1 phospholipase D zeta1 [Arabidopsis thaliana] gi|11994476|dbj|BAA95772.2| phospholipase D-like protein [Arabidopsis thaliana] gi|332642344|gb|AEE75865.1| phospholipase D P1 [Arabidopsis thaliana]

Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1100
TAIR\|locus:2086750		1096	PLDP1 "phospholipase D P1" [Ar	0.987	0.990	0.746	0.0
TAIR\|locus:2078037		1046	PLDP2 "phospholipase D P2" [Ar	0.592	0.623	0.605	0.0
UNIPROTKB\|Q13393		1074	PLD1 "Phospholipase D1" [Homo	0.261	0.268	0.477	1.6e-144
UNIPROTKB\|F1SH14		1074	PLD1 "Uncharacterized protein"	0.262	0.269	0.469	6.8e-144
MGI\|MGI:109585		1074	Pld1 "phospholipase D1" [Mus m	0.261	0.268	0.484	1.8e-143
UNIPROTKB\|D4A318		1037	Pld1 "Phospholipase D1" [Rattu	0.261	0.277	0.487	3.4e-143
RGD\|3349		1074	Pld1 "phospholipase D1" [Rattu	0.261	0.268	0.487	1.6e-142
UNIPROTKB\|P70496		1074	Pld1 "Phospholipase D1" [Rattu	0.261	0.268	0.487	1.6e-142
UNIPROTKB\|A6QR57		1034	PRKCSH "Uncharacterized protei	0.262	0.279	0.476	3.5e-141
ZFIN\|ZDB-GENE-070510-3		1042	pld1b "phospholipase D1b" [Dan	0.245	0.259	0.465	2e-133

TAIR\|locus:2086750 PLDP1 "phospholipase D P1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 4384 (1548.3 bits), Expect = 0., P = 0.
 Identities = 829/1110 (74%), Positives = 934/1110 (84%)

Query:     1 MASEDSI-PGVGL-RYVQMQQE-----TSSFFTSVGSGPEPEPARIFDELPKASIVSVSR 53
             MASE  + P  G  RY QMQ E      SS F S    P  E  RIF+ELPKA IVSVSR
Sbjct:     1 MASEQLMSPASGGGRYFQMQPEQFPSMVSSLF-SFAPAPTQETNRIFEELPKAVIVSVSR 59

Query:    54 PDAGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFXXXXXXXXXXXXWL 113
             PDAGDISP+LLSYTIE QYKQFKW+LVKKASQVFYLHFALK+RAF             WL
Sbjct:    60 PDAGDISPVLLSYTIECQYKQFKWQLVKKASQVFYLHFALKKRAFIEEIHEKQEQVKEWL 119

Query:   114 QNLGMGDHMAVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGRQHSMSDRAKVA 173
             QNLG+GDH  VVQ++D  DE+ ++ DES+K RDVP++AALPVIRP LGRQ S+S R K A
Sbjct:   120 QNLGIGDHPPVVQDED-ADEVPLHQDESAKNRDVPSSAALPVIRP-LGRQQSISVRGKHA 177

Query:   174 MQQYLNHFLGNMDIVNSREVCKFLEASKLSFSPEYGPKLKEDYVMAKHLPKISRNDD-SR 232
             MQ+YLNHFLGN+DIVNSREVC+FLE S LSFSPEYGPKLKEDY+M KHLPK S++DD S 
Sbjct:   178 MQEYLNHFLGNLDIVNSREVCRFLEVSMLSFSPEYGPKLKEDYIMVKHLPKFSKSDDDSN 237

Query:   233 KCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRVSL 292
             +CC C  F CCNDNWQKVW VLKPGFLALL DPFD K +DIIVFDVLP S+GN    +SL
Sbjct:   238 RCCGCCWFCCCNDNWQKVWGVLKPGFLALLEDPFDAKLLDIIVFDVLPVSNGNDGVDISL 297

Query:   293 ATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAGLRPPEGWCHPHRFGSF 352
             A E+K+ NPLRHAFKVT G RSIR+R +  AKV+DWVA+INDA LRPPEGWCHPHRFGS+
Sbjct:   298 AVELKDHNPLRHAFKVTSGNRSIRIRAKNSAKVKDWVASINDAALRPPEGWCHPHRFGSY 357

Query:   353 APPRGMTDDGSQAQWFVDGKAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFHNHASS 412
             APPRG+TDDGSQAQWFVDG AAF AIA++IE+AKSEIFICGWW+CPELYLRRPF  H SS
Sbjct:   358 APPRGLTDDGSQAQWFVDGGAAFAAIAAAIENAKSEIFICGWWVCPELYLRRPFDPHTSS 417

Query:   413 RLDALLEAKAKQGVQIYILLYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFASGVY 472
             RLD LLE KAKQGVQIYIL+YKEVALALKINSVYSKR+LL IHENVRVLRYPDHF+SGVY
Sbjct:   418 RLDNLLENKAKQGVQIYILIYKEVALALKINSVYSKRRLLGIHENVRVLRYPDHFSSGVY 477

Query:   473 LWSHHEKLVIVDYQICFIGGLDLCFGRYDTFEHKIGDNPPLIWPGKDYYNPRESEPNSWE 532
             LWSHHEKLVIVD Q+CFIGGLDLCFGRYDTFEHK+GDNP + WPGKDYYNPRESEPN+WE
Sbjct:   478 LWSHHEKLVIVDNQVCFIGGLDLCFGRYDTFEHKVGDNPSVTWPGKDYYNPRESEPNTWE 537

Query:   533 DTMRDELDRGKYPRMPWHDIHCALWGPPCRDVARHFVQRWNYAKRNKAPNEETIPLLMPQ 592
             D ++DEL+R K+PRMPWHD+HCALWGPPCRDVARHFVQRWNYAKRNKAP E++IPLLMPQ
Sbjct:   538 DALKDELERKKHPRMPWHDVHCALWGPPCRDVARHFVQRWNYAKRNKAPYEDSIPLLMPQ 597

Query:   593 HQMVIPHYMGRSREVEVESKNVEDNSKSIKRQDSFTFRSSLQDIPLLLPQEPEVLDDSSR 652
             H MVIPHYMGR  E ++ESK  ED+ + I+R DSF+ RSSLQDIPLLLP EP   D SS 
Sbjct:   598 HHMVIPHYMGRQEESDIESKKEEDSIRGIRRDDSFSSRSSLQDIPLLLPHEPVDQDGSSG 657

Query:   653 GLIPNGLDYTTTKSASFRYQKAKIEPVVTDMPMKGFVDDRDSPHHHLKTSLDV-MTLPGT 711
             G   NG   T  ++  F ++K+KIEPV  D PM+GFVDDR+         LD+ +   G+
Sbjct:   658 GHKENG---TNNRNGPFSFRKSKIEPVDGDTPMRGFVDDRNG--------LDLPVAKRGS 706

Query:   712 KSSDIEWWETQERGDQVGSTDETGQVGPRASCRCQIIRSVSQWSAGTSQLEESIHCAYCS 771
              + D EWWETQ+   QVGS DETGQVGPR SCRCQIIRSVSQWSAGTSQ+EESIH AY S
Sbjct:   707 NAIDSEWWETQDHDYQVGSPDETGQVGPRTSCRCQIIRSVSQWSAGTSQVEESIHSAYRS 766

Query:   772 LIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPLLPGF 831
             LI+KAEHFIYIENQFFISGLSGD+ ++NRVLE+LY+RILRA+NEKK FRV++VIPLLPGF
Sbjct:   767 LIDKAEHFIYIENQFFISGLSGDDTVKNRVLEALYKRILRAHNEKKIFRVVVVIPLLPGF 826

Query:   832 QGGVDDGGAASVRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLRAYGRLFED 891
             QGG+DD GAASVRAIMHWQYRTI RG NSIL NLY  +G K HDYISFYGLRAYG+L ED
Sbjct:   827 QGGIDDSGAASVRAIMHWQYRTIYRGHNSILTNLYNTIGVKAHDYISFYGLRAYGKLSED 886

Query:   892 GPVATSQVYVHSKVMIIDDSIALIGSANINDRSLLGSRDSEIGVLIEDKESVDSFMGGKP 951
             GPVATSQVYVHSK+MI+DD  ALIGSANINDRSLLGSRDSEIGVLIED E VDS M GKP
Sbjct:   887 GPVATSQVYVHSKIMIVDDRAALIGSANINDRSLLGSRDSEIGVLIEDTELVDSRMAGKP 946

Query:   952 WKAGKLCLSLRLSLWSEHLGLRSREVNQIIDPVIDSTYKDIWVATARMNTTIYQDVFSCV 1011
             WKAGK   SLRLSLWSEHLGLR+ E++QIIDPV DSTYK+IW+ATA+ NT IYQDVFSCV
Sbjct:   947 WKAGKFSSSLRLSLWSEHLGLRTGEIDQIIDPVSDSTYKEIWMATAKTNTMIYQDVFSCV 1006

Query:  1012 PNDLIHTRAAIRQNIAFWKEKLGHTTIDLGIAPRNLESYQNGDIQKTDPLERLQAVRGHL 1071
             PNDLIH+R A RQ++++WKEKLGHTTIDLGIAP  LESY NGDI+++DP++RL+A++GHL
Sbjct:  1007 PNDLIHSRMAFRQSLSYWKEKLGHTTIDLGIAPEKLESYHNGDIKRSDPMDRLKAIKGHL 1066

Query:  1072 VSFPLDFMCKEDLRPVFNESEYYAA-QVFY 1100
             VSFPLDFMCKEDLRPVFNESEYYA+ QVF+
Sbjct:  1067 VSFPLDFMCKEDLRPVFNESEYYASPQVFH 1096

GO:0003824 "catalytic activity" evidence=IEA

GO:0004630 "phospholipase D activity" evidence=ISS;TAS

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0048364 "root development" evidence=IGI

GO:0016036 "cellular response to phosphate starvation" evidence=IEP;RCA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042631 "cellular response to water deprivation" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

GO:0048527 "lateral root development" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR\|locus:2078037 PLDP2 "phospholipase D P2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|Q13393 PLD1 "Phospholipase D1" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|F1SH14 PLD1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

MGI\|MGI:109585 Pld1 "phospholipase D1" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|D4A318 Pld1 "Phospholipase D1" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

RGD\|3349 Pld1 "phospholipase D1" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|P70496 Pld1 "Phospholipase D1" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|A6QR57 PRKCSH "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-070510-3 pld1b "phospholipase D1b" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LRZ5	PLDP1_ARATH	3, ., 1, ., 4, ., 4	0.7567	0.9872	0.9908	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.4.4	0.979
3rd Layer	3.1.4	0.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1100
PLN02866		1068	PLN02866, PLN02866, phospholipase D	0.0
cd09141		183	cd09141, PLDc_vPLD1_2_yPLD_like_2, Catalytic domai	1e-100
cd09138		146	cd09138, PLDc_vPLD1_2_yPLD_like_1, Catalytic domai	9e-82
cd09844		182	cd09844, PLDc_vPLD1_2, Catalytic domain, repeat 2,	2e-67
cd09845		182	cd09845, PLDc_vPLD2_2, Catalytic domain, repeat 2,	6e-67
cd09842		151	cd09842, PLDc_vPLD1_1, Catalytic domain, repeat 1,	3e-55
cd09843		145	cd09843, PLDc_vPLD2_1, Catalytic domain, repeat 1,	2e-53
cd01254		134	cd01254, PH_PLD, Phospholipase D pleckstrin homolo	5e-36
cd06895		140	cd06895, PX_PLD, The phosphoinositide binding Phox	4e-33
cd09142		208	cd09142, PLDc_pPLD_like_2, Catalytic domain, repea	9e-33
cd09105		146	cd09105, PLDc_vPLD1_2_like_2, Catalytic domain, re	6e-30
PLN02352		758	PLN02352, PLN02352, phospholipase D epsilon	2e-25
cd09104		147	cd09104, PLDc_vPLD1_2_like_1, Catalytic domain, re	1e-24
cd09200		211	cd09200, PLDc_pPLDbeta_2, Catalytic domain, repeat	1e-23
cd09199		211	cd09199, PLDc_pPLDalpha_2, Catalytic domain, repea	3e-23
PLN03008		868	PLN03008, PLN03008, Phospholipase D delta	4e-23
PLN02270		808	PLN02270, PLN02270, phospholipase D alpha	5e-22
PLN02352		758	PLN02352, PLN02352, phospholipase D epsilon	1e-17
PLN03008		868	PLN03008, PLN03008, Phospholipase D delta	1e-17
cd09143		142	cd09143, PLDc_vPLD1_2_like_bac_2, Catalytic domain	5e-16
PLN02270		808	PLN02270, PLN02270, phospholipase D alpha	7e-16
cd09140		146	cd09140, PLDc_vPLD1_2_like_bac_1, Catalytic domain	5e-15
cd09139		176	cd09139, PLDc_pPLD_like_1, Catalytic domain, repea	1e-13
COG1502		438	COG1502, Cls, Phosphatidylserine/phosphatidylglyce	3e-13
cd09198		180	cd09198, PLDc_pPLDbeta_1, Catalytic domain, repeat	7e-13
COG1502		438	COG1502, Cls, Phosphatidylserine/phosphatidylglyce	1e-12
cd09110		154	cd09110, PLDc_CLS_1, Catalytic domain, repeat 1, o	6e-12
cd09155		156	cd09155, PLDc_PaCLS_like_1, Putative catalytic dom	2e-10
cd09197		178	cd09197, PLDc_pPLDalpha_1, Catalytic domain, repea	1e-09
pfam13091		129	pfam13091, PLDc_2, PLD-like domain	2e-08
cd09112		174	cd09112, PLDc_CLS_2, catalytic domain repeat 2 of	4e-08
cd00138		119	cd00138, PLDc_SF, Catalytic domain of phospholipas	3e-07
cd00138		119	cd00138, PLDc_SF, Catalytic domain of phospholipas	6e-07
smart00155		28	smart00155, PLDc, Phospholipase D	7e-07
cd09113		218	cd09113, PLDc_ymdC_like_2, Putative catalytic doma	1e-06
cd09162		172	cd09162, PLDc_CLS_unchar1_2, Putative catalytic do	3e-06
pfam00614		28	pfam00614, PLDc, Phospholipase D Active site motif	5e-06
PRK01642		483	PRK01642, cls, cardiolipin synthetase; Reviewed	6e-06
cd09127		141	cd09127, PLDc_unchar1_1, Putative catalytic domain	9e-06
cd09106		153	cd09106, PLDc_vPLD3_4_5_like_1, Putative catalytic	1e-05
cd09159		170	cd09159, PLDc_ybhO_like_2, Catalytic domain, repea	2e-05
pfam00614		28	pfam00614, PLDc, Phospholipase D Active site motif	3e-05
cd09131		143	cd09131, PLDc_unchar3, Putative catalytic domain o	3e-05
PRK01642		483	PRK01642, cls, cardiolipin synthetase; Reviewed	1e-04
cd09128		142	cd09128, PLDc_unchar1_2, Putative catalytic domain	1e-04
cd09158		174	cd09158, PLDc_EcCLS_like_2, Catalytic domain, repe	2e-04
cd09163		176	cd09163, PLDc_CLS_unchar2_2, Putative catalytic do	3e-04
smart00155		28	smart00155, PLDc, Phospholipase D	5e-04
PRK12452		509	PRK12452, PRK12452, cardiolipin synthetase; Review	5e-04
cd09157		155	cd09157, PLDc_CLS_unchar2_1, Putative catalytic do	5e-04
cd09116		138	cd09116, PLDc_Nuc_like, Catalytic domain of EDTA-r	9e-04
cd09133		127	cd09133, PLDc_unchar5, Putative catalytic domain o	0.001
PRK13912		177	PRK13912, PRK13912, nuclease NucT; Provisional	0.001

>gnl\|CDD\|215467 PLN02866, PLN02866, phospholipase D	Back alignment and domain information

 Score = 2218 bits (5748), Expect = 0.0
 Identities = 871/1070 (81%), Positives = 958/1070 (89%), Gaps = 7/1070 (0%)

Query: 34   PEPARIFDELPKASIVSVSRPDAGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFAL 93
            PE  RIFDELPKA+IVSVSRPDAGDISP+LLSYTIE+QYKQFKW L KKASQV YLHFAL
Sbjct: 3    PESCRIFDELPKATIVSVSRPDAGDISPVLLSYTIELQYKQFKWTLYKKASQVLYLHFAL 62

Query: 94   KRRAFFEEIQEKQEQVKEWLQNLGMGDHMAVVQEDDEGDEIAV--NHDESSKKRDVPANA 151
            K+RAF EE+ EKQEQVKEWLQNLG+GDH AVVQ+DDE D+  V  +HDES+K RDVP++A
Sbjct: 63   KKRAFIEELHEKQEQVKEWLQNLGIGDHPAVVQDDDEPDDGTVPLHHDESAKNRDVPSSA 122

Query: 152  ALPVIRPALGRQHSMSDRAKVAMQQYLNHFLGNMDIVNSREVCKFLEASKLSFSPEYGPK 211
            ALPVIRPALGRQ S+SDRAKVAMQ+YLNHFLGN+DIVNSREVCKFLE SKLSFSPEYGPK
Sbjct: 123  ALPVIRPALGRQQSISDRAKVAMQEYLNHFLGNLDIVNSREVCKFLEVSKLSFSPEYGPK 182

Query: 212  LKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPM 271
            LKE YVM KHLPKI ++DDSR C  C  F+CCNDNWQKVWAVLKPGFLALL DPFD KP+
Sbjct: 183  LKEGYVMVKHLPKIPKSDDSRGCFPCCCFSCCNDNWQKVWAVLKPGFLALLEDPFDAKPL 242

Query: 272  DIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAA 331
            DIIVFDVLPAS+GNGEG++SLA E+KERNPLR  FKVTCG RSIRLRT++ AKV+DWVAA
Sbjct: 243  DIIVFDVLPASNGNGEGQISLAKEIKERNPLRFGFKVTCGNRSIRLRTKSSAKVKDWVAA 302

Query: 332  INDAGLRPPEGWCHPHRFGSFAPPRGMTDDGSQAQWFVDGKAAFEAIASSIEDAKSEIFI 391
            INDAGLRPPEGWCHPHRFGSFAPPRG+T+DGSQAQWF+DG AAFEAIAS+IE+AKSEIFI
Sbjct: 303  INDAGLRPPEGWCHPHRFGSFAPPRGLTEDGSQAQWFIDGHAAFEAIASAIENAKSEIFI 362

Query: 392  CGWWLCPELYLRRPFHNHASSRLDALLEAKAKQGVQIYILLYKEVALALKINSVYSKRKL 451
             GWWLCPELYLRRPFH+H SSRLD+LLEAKAKQGVQIYILLYKEVALALKINSVYSKR+L
Sbjct: 363  TGWWLCPELYLRRPFHDHESSRLDSLLEAKAKQGVQIYILLYKEVALALKINSVYSKRRL 422

Query: 452  LSIHENVRVLRYPDHFASGVYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTFEHKIGDNP 511
            L IHENV+VLRYPDHF+SGVYLWSHHEKLVIVDYQICFIGGLDLCFGRYDT EH++GD P
Sbjct: 423  LGIHENVKVLRYPDHFSSGVYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTPEHRVGDCP 482

Query: 512  PLIWPGKDYYNPRESEPNSWEDTMRDELDRGKYPRMPWHDIHCALWGPPCRDVARHFVQR 571
            P+IWPGKDYYNPRESEPNSWEDTM+DELDR KYPRMPWHD+HCALWGPPCRDVARHFVQR
Sbjct: 483  PVIWPGKDYYNPRESEPNSWEDTMKDELDRRKYPRMPWHDVHCALWGPPCRDVARHFVQR 542

Query: 572  WNYAKRNKAPNEETIPLLMPQHQMVIPHYMGRSREVEVESKNVEDNSKSIKRQDSFTFRS 631
            WNYAKRNKAPNE+ IPLLMP H MVIPHY+G S E E+ESKN EDN K I RQDSF+ RS
Sbjct: 543  WNYAKRNKAPNEQAIPLLMPHHHMVIPHYLGGSEEEEIESKNQEDNQKGIARQDSFSSRS 602

Query: 632  SLQDIPLLLPQEPEVLDDSSRGLIPNGLDYTTTKSASFRYQKAKIEPVVTDMPMKGFVDD 691
            SLQDIPLLLPQE +  D S  G   NG++ T     SF ++K+KIEPV+ D PMKGFVDD
Sbjct: 603  SLQDIPLLLPQEADATDGSGGGHKLNGMNSTNGS-LSFSFRKSKIEPVLPDTPMKGFVDD 661

Query: 692  RDSPHHHLKTSLDVMTLPGTKSSDIEWWETQERGDQVGSTDETGQVGPRASCRCQIIRSV 751
                   +K         G+K SD EWWETQERGDQVGS DE GQVGPR SCRCQ+IRSV
Sbjct: 662  LGFLDLSVKM---SSAERGSKESDSEWWETQERGDQVGSADEVGQVGPRVSCRCQVIRSV 718

Query: 752  SQWSAGTSQLEESIHCAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILR 811
            SQWSAGTSQ+EESIH AYCSLIEKAEHFIYIENQFFISGLSGD+ I+NRVLE+LYRRILR
Sbjct: 719  SQWSAGTSQVEESIHAAYCSLIEKAEHFIYIENQFFISGLSGDDTIQNRVLEALYRRILR 778

Query: 812  AYNEKKCFRVIIVIPLLPGFQGGVDDGGAASVRAIMHWQYRTICRGQNSILHNLYALLGP 871
            A+ EKKCFRVIIVIPLLPGFQGGVDDGGAASVRAIMHWQYRTICRG+NSILHNLY LLGP
Sbjct: 779  AHKEKKCFRVIIVIPLLPGFQGGVDDGGAASVRAIMHWQYRTICRGKNSILHNLYDLLGP 838

Query: 872  KTHDYISFYGLRAYGRLFEDGPVATSQVYVHSKVMIIDDSIALIGSANINDRSLLGSRDS 931
            KTHDYISFYGLRAYGRLFE GP+ATSQ+YVHSK+MI+DD  ALIGSANINDRSLLGSRDS
Sbjct: 839  KTHDYISFYGLRAYGRLFEGGPLATSQIYVHSKIMIVDDRAALIGSANINDRSLLGSRDS 898

Query: 932  EIGVLIEDKESVDSFMGGKPWKAGKLCLSLRLSLWSEHLGLRSREVNQIIDPVIDSTYKD 991
            EIGV+IEDKE VDS M GKPWKAGK   SLRLSLWSEHLGLR+ E+++IIDPV D+TYKD
Sbjct: 899  EIGVVIEDKEFVDSSMNGKPWKAGKFAHSLRLSLWSEHLGLRAGEIDKIIDPVCDTTYKD 958

Query: 992  IWVATARMNTTIYQDVFSCVPNDLIHTRAAIRQNIAFWKEKLGHTTIDLGIAPRNLESYQ 1051
            +W+ATA+ NT IYQDVFSC+PNDLIH+RAA+RQ++A  KEKLGHTTIDLGIAP  LESY+
Sbjct: 959  LWMATAKTNTDIYQDVFSCIPNDLIHSRAALRQSMASRKEKLGHTTIDLGIAPEKLESYE 1018

Query: 1052 NGDIQKTDPLERLQAVRGHLVSFPLDFMCKEDLRPVFNESEYYA-AQVFY 1100
            NGDI+ +DP+ERL++VRGHLVSFPLDFMC+EDLRPVFNESEYYA  QVF+
Sbjct: 1019 NGDIKSSDPMERLKSVRGHLVSFPLDFMCQEDLRPVFNESEYYASPQVFH 1068

Length = 1068

>gnl\|CDD\|197239 cd09141, PLDc_vPLD1_2_yPLD_like_2, Catalytic domain, repeat 2, of vertebrate phospholipases, PLD1 and PLD2, yeast PLDs, and similar proteins	Back alignment and domain information

>gnl\|CDD\|197236 cd09138, PLDc_vPLD1_2_yPLD_like_1, Catalytic domain, repeat 1, of vertebrate phospholipases, PLD1 and PLD2, yeast PLDs, and similar proteins	Back alignment and domain information

>gnl\|CDD\|197302 cd09844, PLDc_vPLD1_2, Catalytic domain, repeat 2, of vertebrate phospholipase D1	Back alignment and domain information

>gnl\|CDD\|197303 cd09845, PLDc_vPLD2_2, Catalytic domain, repeat 2, of vertebrate phospholipase D2	Back alignment and domain information

>gnl\|CDD\|197300 cd09842, PLDc_vPLD1_1, Catalytic domain, repeat 1, of vertebrate phospholipase D1	Back alignment and domain information

>gnl\|CDD\|197301 cd09843, PLDc_vPLD2_1, Catalytic domain, repeat 1, of vertebrate phospholipase D2	Back alignment and domain information

>gnl\|CDD\|241285 cd01254, PH_PLD, Phospholipase D pleckstrin homology (PH) domain	Back alignment and domain information

>gnl\|CDD\|132805 cd06895, PX_PLD, The phosphoinositide binding Phox Homology domain of Phospholipase D	Back alignment and domain information

>gnl\|CDD\|197240 cd09142, PLDc_pPLD_like_2, Catalytic domain, repeat 2, of plant phospholipase D and similar proteins	Back alignment and domain information

>gnl\|CDD\|197204 cd09105, PLDc_vPLD1_2_like_2, Catalytic domain, repeat 2, of vertebrate phospholipases, PLD1 and PLD2, and similar proteins	Back alignment and domain information

>gnl\|CDD\|215202 PLN02352, PLN02352, phospholipase D epsilon	Back alignment and domain information

>gnl\|CDD\|197203 cd09104, PLDc_vPLD1_2_like_1, Catalytic domain, repeat 1, of vertebrate phospholipases, PLD1 and PLD2, and similar proteins	Back alignment and domain information

>gnl\|CDD\|197296 cd09200, PLDc_pPLDbeta_2, Catalytic domain, repeat 2, of plant beta-type phospholipase D	Back alignment and domain information

>gnl\|CDD\|197295 cd09199, PLDc_pPLDalpha_2, Catalytic domain, repeat 2, of plant alpha-type phospholipase D	Back alignment and domain information

>gnl\|CDD\|178585 PLN03008, PLN03008, Phospholipase D delta	Back alignment and domain information

>gnl\|CDD\|165912 PLN02270, PLN02270, phospholipase D alpha	Back alignment and domain information

>gnl\|CDD\|215202 PLN02352, PLN02352, phospholipase D epsilon	Back alignment and domain information

>gnl\|CDD\|178585 PLN03008, PLN03008, Phospholipase D delta	Back alignment and domain information

>gnl\|CDD\|197241 cd09143, PLDc_vPLD1_2_like_bac_2, Catalytic domain, repeat 2, of uncharacterized bacterial proteins with similarity to vertebrate phospholipases, PLD1 and PLD2	Back alignment and domain information

>gnl\|CDD\|165912 PLN02270, PLN02270, phospholipase D alpha	Back alignment and domain information

>gnl\|CDD\|197238 cd09140, PLDc_vPLD1_2_like_bac_1, Catalytic domain, repeat 1, of uncharacterized bacterial proteins with similarity to vertebrate phospholipases, PLD1 and PLD2	Back alignment and domain information

>gnl\|CDD\|197237 cd09139, PLDc_pPLD_like_1, Catalytic domain, repeat 1, of plant phospholipase D and similar proteins	Back alignment and domain information

>gnl\|CDD\|224419 COG1502, Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes [Lipid metabolism]	Back alignment and domain information

>gnl\|CDD\|197294 cd09198, PLDc_pPLDbeta_1, Catalytic domain, repeat 1, of plant beta-type phospholipase D	Back alignment and domain information

>gnl\|CDD\|224419 COG1502, Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes [Lipid metabolism]	Back alignment and domain information

>gnl\|CDD\|197209 cd09110, PLDc_CLS_1, Catalytic domain, repeat 1, of bacterial cardiolipin synthase and similar proteins	Back alignment and domain information

>gnl\|CDD\|197252 cd09155, PLDc_PaCLS_like_1, Putative catalytic domain, repeat 1, of Pseudomonas aeruginosa cardiolipin synthase and similar proteins	Back alignment and domain information

>gnl\|CDD\|197293 cd09197, PLDc_pPLDalpha_1, Catalytic domain, repeat 1, of plant alpha-type phospholipase D	Back alignment and domain information

>gnl\|CDD\|221916 pfam13091, PLDc_2, PLD-like domain	Back alignment and domain information

>gnl\|CDD\|197211 cd09112, PLDc_CLS_2, catalytic domain repeat 2 of bacterial cardiolipin synthase and similar proteins	Back alignment and domain information

>gnl\|CDD\|197200 cd00138, PLDc_SF, Catalytic domain of phospholipase D superfamily proteins	Back alignment and domain information

>gnl\|CDD\|197200 cd00138, PLDc_SF, Catalytic domain of phospholipase D superfamily proteins	Back alignment and domain information

>gnl\|CDD\|197546 smart00155, PLDc, Phospholipase D	Back alignment and domain information

>gnl\|CDD\|197212 cd09113, PLDc_ymdC_like_2, Putative catalytic domain, repeat 2, of Escherichia coli uncharacterized protein ymdC and similar proteins	Back alignment and domain information

>gnl\|CDD\|197259 cd09162, PLDc_CLS_unchar1_2, Putative catalytic domain, repeat 2, of uncharacterized proteins similar to bacterial cardiolipin synthase	Back alignment and domain information

>gnl\|CDD\|216022 pfam00614, PLDc, Phospholipase D Active site motif	Back alignment and domain information

>gnl\|CDD\|234967 PRK01642, cls, cardiolipin synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|197225 cd09127, PLDc_unchar1_1, Putative catalytic domain, repeat 1, of uncharacterized phospholipase D-like proteins	Back alignment and domain information

>gnl\|CDD\|197205 cd09106, PLDc_vPLD3_4_5_like_1, Putative catalytic domain, repeat 1, of vertebrate phospholipases, PLD3, PLD4 and PLD5, viral envelope proteins K4 and p37, and similar proteins	Back alignment and domain information

>gnl\|CDD\|197256 cd09159, PLDc_ybhO_like_2, Catalytic domain, repeat 2, of Escherichia coli cardiolipin synthase ybhO and similar proteins	Back alignment and domain information

>gnl\|CDD\|216022 pfam00614, PLDc, Phospholipase D Active site motif	Back alignment and domain information

>gnl\|CDD\|197229 cd09131, PLDc_unchar3, Putative catalytic domain of uncharacterized phospholipase D-like proteins	Back alignment and domain information

>gnl\|CDD\|234967 PRK01642, cls, cardiolipin synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|197226 cd09128, PLDc_unchar1_2, Putative catalytic domain, repeat 2, of uncharacterized phospholipase D-like proteins	Back alignment and domain information

>gnl\|CDD\|197255 cd09158, PLDc_EcCLS_like_2, Catalytic domain, repeat 2, of Escherichia coli cardiolipin synthase and similar proteins	Back alignment and domain information

>gnl\|CDD\|197260 cd09163, PLDc_CLS_unchar2_2, Putative catalytic domain, repeat 2, of uncharacterized proteins similar to bacterial cardiolipin synthase	Back alignment and domain information

>gnl\|CDD\|197546 smart00155, PLDc, Phospholipase D	Back alignment and domain information

>gnl\|CDD\|171510 PRK12452, PRK12452, cardiolipin synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|197254 cd09157, PLDc_CLS_unchar2_1, Putative catalytic domain, repeat 1, of uncharacterized proteins similar to bacterial cardiolipin synthase	Back alignment and domain information

>gnl\|CDD\|197215 cd09116, PLDc_Nuc_like, Catalytic domain of EDTA-resistant nuclease Nuc, vertebrate phospholipase D6, and similar proteins	Back alignment and domain information

>gnl\|CDD\|197231 cd09133, PLDc_unchar5, Putative catalytic domain of uncharacterized hypothetical proteins with one or two copies of the HKD motif	Back alignment and domain information

>gnl\|CDD\|184389 PRK13912, PRK13912, nuclease NucT; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1100
PLN02866		1068	phospholipase D	100.0
KOG1329		887	consensus Phospholipase D1 [Lipid transport and me	100.0
PLN02352		758	phospholipase D epsilon	100.0
PLN03008		868	Phospholipase D delta	100.0
PLN02270		808	phospholipase D alpha	100.0
PRK12452		509	cardiolipin synthetase; Reviewed	100.0
PRK01642		483	cls cardiolipin synthetase; Reviewed	100.0
PRK11263		411	cardiolipin synthase 2; Provisional	100.0
COG1502		438	Cls Phosphatidylserine/phosphatidylglycerophosphat	100.0
PRK09428		451	pssA phosphatidylserine synthase; Provisional	100.0
PHA02820		424	phospholipase-D-like protein; Provisional	100.0
PHA03003		369	palmytilated EEV membrane glycoprotein; Provisiona	100.0
cd07297		130	PX_PLD2 The phosphoinositide binding Phox Homology	99.94
cd01254		121	PH_PLD Phospholipase D (PLD) pleckstrin homology (	99.87
cd07296		135	PX_PLD1 The phosphoinositide binding Phox Homology	99.86
cd06895		140	PX_PLD The phosphoinositide binding Phox Homology	99.86
PRK05443		691	polyphosphate kinase; Provisional	99.75
TIGR03705		672	poly_P_kin polyphosphate kinase 1. Members of this	99.72
cd00138		176	PLDc Phospholipase D. Active site motifs; The PLD	99.6
PHA02820		424	phospholipase-D-like protein; Provisional	99.51
cd00138		176	PLDc Phospholipase D. Active site motifs; The PLD	99.5
KOG3603		456	consensus Predicted phospholipase D [General funct	99.43
PRK12452		509	cardiolipin synthetase; Reviewed	99.36
PRK13912		177	nuclease NucT; Provisional	99.33
PRK13912		177	nuclease NucT; Provisional	99.31
PHA03003		369	palmytilated EEV membrane glycoprotein; Provisiona	99.31
cd06875		116	PX_IRAS The phosphoinositide binding Phox Homology	99.2
PF13091		126	PLDc_2: PLD-like domain; PDB: 2ZE4_A 2ZE9_A 1BYS_A	99.14
PF13091		126	PLDc_2: PLD-like domain; PDB: 2ZE4_A 2ZE9_A 1BYS_A	99.06
PRK01642		483	cls cardiolipin synthetase; Reviewed	99.06
cd06878		127	PX_SNX25 The phosphoinositide binding Phox Homolog	99.03
cd06872		107	PX_SNX19_like_plant The phosphoinositide binding P	99.01
KOG1259		490	consensus Nischarin, modulator of integrin alpha5	99.01
PRK11263		411	cardiolipin synthase 2; Provisional	98.99
PF00787		113	PX: PX domain; InterPro: IPR001683 The PX (phox) d	98.95
cd06880		110	PX_SNX22 The phosphoinositide binding Phox Homolog	98.94
cd06871		120	PX_MONaKA The phosphoinositide binding Phox Homolo	98.92
cd06877		119	PX_SNX14 The phosphoinositide binding Phox Homolog	98.9
cd06870		109	PX_CISK The phosphoinositide binding Phox Homology	98.89
PRK09428		451	pssA phosphatidylserine synthase; Provisional	98.85
cd06897		108	PX_SNARE The phosphoinositide binding Phox Homolog	98.84
cd06882		123	PX_p40phox The phosphoinositide binding Phox Homol	98.81
cd07276		110	PX_SNX16 The phosphoinositide binding Phox Homolog	98.79
PF00614		28	PLDc: Phospholipase D Active site motif; InterPro:	98.77
cd06883		109	PX_PI3K_C2 The phosphoinositide binding Phox Homol	98.72
cd06876		133	PX_MDM1p The phosphoinositide binding Phox Homolog	98.7
PRK05443		691	polyphosphate kinase; Provisional	98.66
cd06890		112	PX_Bem1p The phosphoinositide binding Phox Homolog	98.65
cd06873		120	PX_SNX13 The phosphoinositide binding Phox Homolog	98.65
cd01251		103	PH_centaurin_alpha Centaurin alpha Pleckstrin homo	98.63
smart00312		105	PX PhoX homologous domain, present in p47phox and	98.6
cd07279		112	PX_SNX20_21_like The phosphoinositide binding Phox	98.59
cd07280		120	PX_YPT35 The phosphoinositide binding Phox Homolog	98.58
cd06884		111	PX_PI3K_C2_68D The phosphoinositide binding Phox H	98.57
cd06881		117	PX_SNX15_like The phosphoinositide binding Phox Ho	98.56
cd06887		118	PX_p47phox The phosphoinositide binding Phox Homol	98.56
cd07300		114	PX_SNX20 The phosphoinositide binding Phox Homolog	98.56
cd06886		106	PX_SNX27 The phosphoinositide binding Phox Homolog	98.55
cd06874		127	PX_KIF16B_SNX23 The phosphoinositide binding Phox	98.53
cd06869		119	PX_UP2_fungi The phosphoinositide binding Phox Hom	98.53
cd06888		119	PX_FISH The phosphoinositide binding Phox Homology	98.51
cd07277		118	PX_RUN The phosphoinositide binding Phox Homology	98.5
cd06867		112	PX_SNX41_42 The phosphoinositide binding Phox Homo	98.5
cd07301		112	PX_SNX21 The phosphoinositide binding Phox Homolog	98.5
cd06093		106	PX_domain The Phox Homology domain, a phosphoinosi	98.47
cd06865		120	PX_SNX_like The phosphoinositide binding Phox Homo	98.46
COG1502		438	Cls Phosphatidylserine/phosphatidylglycerophosphat	98.45
cd07289		109	PX_PI3K_C2_alpha The phosphoinositide binding Phox	98.43
cd06861		112	PX_Vps5p The phosphoinositide binding Phox Homolog	98.42
cd01233		100	Unc104 Unc-104 pleckstrin homology (PH) domain. Un	98.41
cd07282		124	PX_SNX2 The phosphoinositide binding Phox Homology	98.41
cd06859		114	PX_SNX1_2_like The phosphoinositide binding Phox H	98.39
cd06862		125	PX_SNX9_18_like The phosphoinositide binding Phox	98.39
cd01238		106	PH_Tec Tec pleckstrin homology (PH) domain. Tec pl	98.38
cd06864		129	PX_SNX4 The phosphoinositide binding Phox Homology	98.37
cd06879		138	PX_UP1_plant The phosphoinositide binding Phox Hom	98.35
smart00155		28	PLDc Phospholipase D. Active site motifs. Phosphat	98.34
cd06898		113	PX_SNX10 The phosphoinositide binding Phox Homolog	98.34
cd06868		120	PX_HS1BP3 The phosphoinositide binding Phox Homolo	98.34
cd07281		124	PX_SNX1 The phosphoinositide binding Phox Homology	98.32
cd07287		118	PX_RPK118_like The phosphoinositide binding Phox H	98.3
cd01260		96	PH_CNK Connector enhancer of KSR (Kinase suppresso	98.29
cd06893		132	PX_SNX19 The phosphoinositide binding Phox Homolog	98.29
cd06885		104	PX_SNX17_31 The phosphoinositide binding Phox Homo	98.28
KOG3603		456	consensus Predicted phospholipase D [General funct	98.28
cd06863		118	PX_Atg24p The phosphoinositide binding Phox Homolo	98.23
cd06866		105	PX_SNX8_Mvp1p_like The phosphoinositide binding Ph	98.21
cd07288		118	PX_SNX15 The phosphoinositide binding Phox Homolog	98.2
cd06894		123	PX_SNX3_like The phosphoinositide binding Phox Hom	98.16
cd07295		116	PX_Grd19 The phosphoinositide binding Phox Homolog	98.16
cd01236		104	PH_outspread Outspread Pleckstrin homology (PH) do	98.15
cd07293		123	PX_SNX3 The phosphoinositide binding Phox Homology	98.15
cd01265		95	PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain	98.14
cd07294		132	PX_SNX12 The phosphoinositide binding Phox Homolog	98.12
PF00169		104	PH: PH domain; InterPro: IPR001849 The pleckstrin	98.09
cd07285		126	PX_SNX9 The phosphoinositide binding Phox Homology	98.09
cd06889		121	PX_NoxO1 The phosphoinositide binding Phox Homolog	98.07
cd07286		127	PX_SNX18 The phosphoinositide binding Phox Homolog	98.06
cd07290		109	PX_PI3K_C2_beta The phosphoinositide binding Phox	98.05
cd06860		116	PX_SNX7_30_like The phosphoinositide binding Phox	98.05
cd01264		101	PH_melted Melted pleckstrin homology (PH) domain.	98.04
cd01246		91	PH_oxysterol_bp Oxysterol binding protein (OSBP) P	98.0
cd01247		91	PH_GPBP Goodpasture antigen binding protein (GPBP)	97.99
PF00614		28	PLDc: Phospholipase D Active site motif; InterPro:	97.99
cd01250		94	PH_centaurin Centaurin Pleckstrin homology (PH) do	97.98
cd01257		101	PH_IRS Insulin receptor substrate (IRS) pleckstrin	97.95
cd01252		125	PH_cytohesin Cytohesin Pleckstrin homology (PH) do	97.9
cd01235		101	PH_SETbf Set binding factor Pleckstrin Homology (P	97.87
cd01266		108	PH_Gab Gab (Grb2-associated binder) pleckstrin hom	97.84
cd07283		116	PX_SNX30 The phosphoinositide binding Phox Homolog	97.8
cd01244		98	PH_RasGAP_CG9209 RAS_GTPase activating protein (GA	97.69
PF15413		112	PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FE	97.53
cd07284		116	PX_SNX7 The phosphoinositide binding Phox Homology	97.52
smart00233		102	PH Pleckstrin homology domain. Domain commonly fou	97.45
KOG3964		469	consensus Phosphatidylglycerolphosphate synthase [	97.44
smart00155		28	PLDc Phospholipase D. Active site motifs. Phosphat	97.37
PF15409		89	PH_8: Pleckstrin homology domain	97.32
cd01241		102	PH_Akt Akt pleckstrin homology (PH) domain. Akt pl	97.29
TIGR03705		672	poly_P_kin polyphosphate kinase 1. Members of this	97.26
PLN02866		1068	phospholipase D	97.19
PF13918		177	PLDc_3: PLD-like domain	97.13
PF07894		284	DUF1669: Protein of unknown function (DUF1669); In	96.99
cd01237		106	Unc112 Unc-112 pleckstrin homology (PH) domain. Un	96.92
cd06896		101	PX_PI3K_C2_gamma The phosphoinositide binding Phox	96.89
cd00821		96	PH Pleckstrin homology (PH) domain. Pleckstrin hom	96.76
cd01263		122	PH_anillin Anillin Pleckstrin homology (PH) domain	96.72
cd01245		98	PH_RasGAP_CG5898 RAS GTPase-activating protein (GA	96.68
PF11495		233	Regulator_TrmB: Archaeal transcriptional regulator	96.61
cd01253		104	PH_beta_spectrin Beta-spectrin pleckstrin homology	96.56
cd01230		117	PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6	96.49
cd01219		101	PH_FGD FGD (faciogenital dysplasia protein) plecks	96.47
cd00900		99	PH-like Pleckstrin homology-like domain. Pleckstri	96.38
PF13918		177	PLDc_3: PLD-like domain	96.15
KOG0930		395	consensus Guanine nucleotide exchange factor Cytoh	96.13
cd06891		140	PX_Vps17p The phosphoinositide binding Phox Homolo	95.9
PF14593		104	PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.	95.65
PLN02352		758	phospholipase D epsilon	95.29
PLN03008		868	Phospholipase D delta	94.87
KOG2527		144	consensus Sorting nexin SNX11 [Intracellular traff	94.36
cd07299		113	PX_TCGAP The phosphoinositide binding Phox Homolog	94.23
cd01220		99	PH_CDEP Chondrocyte-derived ezrin-like domain cont	94.21
cd01256		110	PH_dynamin Dynamin pleckstrin homology (PH) domain	94.13
PLN02270		808	phospholipase D alpha	94.11
cd01242		112	PH_ROK Rok (Rho- associated kinase) pleckstrin hom	93.92
PF15410		119	PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN	93.88
KOG1329		887	consensus Phospholipase D1 [Lipid transport and me	93.61
cd01218		104	PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain	92.57
KOG2059		800	consensus Ras GTPase-activating protein [Signal tr	91.98
cd01243		122	PH_MRCK MRCK (myotonic dystrophy-related Cdc42-bin	91.76
cd07291		141	PX_SNX5 The phosphoinositide binding Phox Homology	90.98
PF07894		284	DUF1669: Protein of unknown function (DUF1669); In	90.8
cd01259		114	PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor pr	89.93
cd07292		141	PX_SNX6 The phosphoinositide binding Phox Homology	89.76
KOG2273		503	consensus Membrane coat complex Retromer, subunit	89.59
cd01234		117	PH_CADPS CADPS (Ca2+-dependent activator protein)	89.57
cd06892		141	PX_SNX5_like The phosphoinositide binding Phox Hom	85.54
cd07278		114	PX_RICS_like The phosphoinositide binding Phox Hom	84.95
cd07298		115	PX_RICS The phosphoinositide binding Phox Homology	83.87
KOG0905		1639	consensus Phosphoinositide 3-kinase [Signal transd	82.88
PF13090		352	PP_kinase_C: Polyphosphate kinase C-terminal domai	82.66
PF13090		352	PP_kinase_C: Polyphosphate kinase C-terminal domai	81.54
KOG1117		1186	consensus Rho- and Arf-GTPase activating protein A	81.09
COG3886		198	Predicted HKD family nuclease [DNA replication, re	80.94
KOG3723		851	consensus PH domain protein Melted [Signal transdu	80.9
COG0855		696	Ppk Polyphosphate kinase [Inorganic ion transport	80.31

>PLN02866 phospholipase D	Back alignment and domain information

Probab=100.00  E-value=2.8e-258  Score=2303.39  Aligned_cols=1064  Identities=82%  Similarity=1.352  Sum_probs=1005.5

Q ss_pred             CCCcccccCCCCeEEEeeeeecCCCCCCCceeEEEEEEEeeeeEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001322           33 EPEPARIFDELPKASIVSVSRPDAGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEW  112 (1100)
Q Consensus        33 ~~~~~~~~~~~~~v~I~~ver~~s~~~~~~~~~YtIEl~hG~fkWtIkRkykdf~~LH~~LK~~~~~~~~~~~~~~~k~~  112 (1100)
                      .||+++||+|||+|+||+|+|+++++++|..+.|||||+|.+|||++.||++++++||++||+|+|++++|+||++.|+|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (1068)
T PLN02866          2 LPESCRIFDELPKATIVSVSRPDAGDISPVLLSYTIELQYKQFKWTLYKKASQVLYLHFALKKRAFIEELHEKQEQVKEW   81 (1068)
T ss_pred             CCcccchhhhCCcceEEEEecCCCCCCCceEEEEEEEEEEeeeeeehhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhCCCCCCccccccCcccccccc--ccccccccCCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHHHhhccccCh
Q 001322          113 LQNLGMGDHMAVVQEDDEGDEIAV--NHDESSKKRDVPANAALPVIRPALGRQHSMSDRAKVAMQQYLNHFLGNMDIVNS  190 (1100)
Q Consensus       113 ~~~lp~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~r~~l~~~~~~~~r~r~~LE~YL~~lL~~~~~~~~  190 (1100)
                      |++|+|++|+++++|++|+||+++  |+++++++|+|||+|+||.+||+||+++++++|++.+||+||++||+++.++|+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~yL~~~l~~~~~~n~  161 (1068)
T PLN02866         82 LQNLGIGDHPAVVQDDDEPDDGTVPLHHDESAKNRDVPSSAALPVIRPALGRQQSISDRAKVAMQEYLNHFLGNLDIVNS  161 (1068)
T ss_pred             HHhcCcccCccccccccccccccccccchhhcccCCCcchhhcceeccccCCCccccHHHHHHHHHHHHHHhccchhcCC
Confidence            999999999999999999999997  677899999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhccccCCCCCCCCCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCc
Q 001322          191 REVCKFLEASKLSFSPEYGPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKP  270 (1100)
Q Consensus       191 ~~l~~FLevS~~sf~~~~g~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~  270 (1100)
                      +++|+|||||.+||++|||+|||||||+|||+++++|++...+||+|+|++||..+|+|||||||+|||+||++|++++|
T Consensus       162 ~~~~~FlevS~lsf~~~~g~K~~Eg~v~~r~~~~~~g~~~~~~~~~~~~~~~~~~~w~k~w~v~k~~~l~~~~~p~~~~~  241 (1068)
T PLN02866        162 REVCKFLEVSKLSFSPEYGPKLKEGYVMVKHLPKIPKSDDSRGCFPCCCFSCCNDNWQKVWAVLKPGFLALLEDPFDAKP  241 (1068)
T ss_pred             HhhhhheeeceeeehhhcCCCcceeEEEEeccCCCCCCCccCCccccccCCeecCchheeEEEEeccEEEEEecCCCCce
Confidence            99999999999999999999999999999999999998888999998899999999999999999999999999999999


Q ss_pred             cEEEEEcCCCCCCCCCCCccccchhhcccCCcceeEEEEeCceEEEEEeCchhhHHHHHHHHHhccCCCCCCCCCCCCCC
Q 001322          271 MDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAGLRPPEGWCHPHRFG  350 (1100)
Q Consensus       271 ~~v~lfD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~~~~~~~~w~~~i~~~~~~~~~~~~~~~rf~  350 (1100)
                      +||||||.+|.+.+++++++.+++.+|++|+++|||+|.|++|+|+|+|+|++++++|+++|+++..+++++|+.+|||+
T Consensus       242 ~~v~lfD~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~ai~~~~~~~~~~~~~~hRF~  321 (1068)
T PLN02866        242 LDIIVFDVLPASNGNGEGQISLAKEIKERNPLRFGFKVTCGNRSIRLRTKSSAKVKDWVAAINDAGLRPPEGWCHPHRFG  321 (1068)
T ss_pred             eEEEEEecccccccCCCcceeecccccccCCCcceEEEecCceEEEEEECCHHHHHHHHHHHHHHHhccCccccccCcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999989999999999999


Q ss_pred             CCCCCcccCCCCCeEEEEecHHHHHHHHHHHHHhcccEEEEeeecCCceeEEEcCCCCchhHHHHHHHHHHhhCCcEEEE
Q 001322          351 SFAPPRGMTDDGSQAQWFVDGKAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFHNHASSRLDALLEAKAKQGVQIYI  430 (1100)
Q Consensus       351 sfap~r~~~~~gn~v~~lvdG~~~f~al~~aI~~Ak~sI~I~~WwlsPe~yL~rp~~~~~~~rL~~lL~~aA~rGVkVrI  430 (1100)
                      ||||+|.++..||.++||+||++||++|++||++||++|+|++||||||+||++|+.+..+++|+++|++||++||+|||
T Consensus       322 SFAP~r~~~~~gN~vk~LvDG~dyF~AL~eAIe~AKesI~I~~WwlsPEiYL~Rp~~D~~g~RL~~lL~rKAkrGVkVrV  401 (1068)
T PLN02866        322 SFAPPRGLTEDGSQAQWFIDGHAAFEAIASAIENAKSEIFITGWWLCPELYLRRPFHDHESSRLDSLLEAKAKQGVQIYI  401 (1068)
T ss_pred             CcCCCccccCCCCEEEEEeCHHHHHHHHHHHHHhcccEEEEEEccCCceEEEEecCCCchHHHHHHHHHHHHHCCCEEEE
Confidence            99999976657999999999999999999999999999999999999999999986678999999999999999999999


Q ss_pred             EEechhhhHhhcchhhhHHHhhccCCCeEEEEcCCCcccCcccccCcceEEEEeCcEEEEccccCCCCCcCCCCCCCCCC
Q 001322          431 LLYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFASGVYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTFEHKIGDN  510 (1100)
Q Consensus       431 Ll~d~~~~~l~~~s~~~k~~L~~l~~nI~V~r~p~~~~~~~~~~~hHqKivVID~~vAfvGGiNL~~GRwDt~~H~l~D~  510 (1100)
                      |+||+++.++.+++.++++.|..+++||+|+++|.+++.+.++||||||+||||+++||+||+|||||||||++|++.|+
T Consensus       402 LLyD~vg~al~~~S~~~k~~L~~lh~gI~V~r~P~~~~~~~ln~RhHRKIVVIDg~IAFvGGiNLc~GRWDT~~H~l~D~  481 (1068)
T PLN02866        402 LLYKEVALALKINSVYSKRRLLGIHENVKVLRYPDHFSSGVYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTPEHRVGDC  481 (1068)
T ss_pred             EEECccccccccCchhhHHHHHHhCCCeEEEecCcccccCcccccCCCCeEEECCCEEEecCcccCCCccCCcccccccc
Confidence            99999988778888888778888899999999998877677899999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCccccccccccCCCCCCCCeEEEEEEEEChHHHHHHHHHHHHHHhhhcCCCCCCCCccccC
Q 001322          511 PPLIWPGKDYYNPRESEPNSWEDTMRDELDRGKYPRMPWHDIHCALWGPPCRDVARHFVQRWNYAKRNKAPNEETIPLLM  590 (1100)
Q Consensus       511 ~~~~~pG~dY~n~r~~d~~~~~~~~~~~ldr~~~~r~pWhDv~~~v~Gpaa~dl~~~F~qrWn~~~~~k~~~~~~~~~l~  590 (1100)
                      ++++|||+||+|+|++||.+|++|++|+|||..+||||||||||+|+||+|+||++||++|||++++.|++++..+|+++
T Consensus       482 ~~~~wPGkDY~Npr~~d~~~~~~~~~d~ldR~~~pRmPWHDV~~~V~GpAardLa~hFvqRWN~at~~k~~~~~~~~ll~  561 (1068)
T PLN02866        482 PPVIWPGKDYYNPRESEPNSWEDTMKDELDRRKYPRMPWHDVHCALWGPPCRDVARHFVQRWNYAKRNKAPNEQAIPLLM  561 (1068)
T ss_pred             cccccCcccccccccccccccccccccccccccCCCCCceEEEEEEECHHHHHHHHHHHHHHHHHhcccCcccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999888899999


Q ss_pred             CccccccccccCCcchhhhcccccccccccccccccccccCccCCCCCCCCCCCccccCCCCCCcCCCCCcccccccccc
Q 001322          591 PQHQMVIPHYMGRSREVEVESKNVEDNSKSIKRQDSFTFRSSLQDIPLLLPQEPEVLDDSSRGLIPNGLDYTTTKSASFR  670 (1100)
Q Consensus       591 p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~p~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  670 (1100)
                      |+++|++|+|.|..++.+.+.++..++.+.++|++++++.++.+++|+++|++.++...+.++...++....+. ..|++
T Consensus       562 p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~llP~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  640 (1068)
T PLN02866        562 PHHHMVIPHYLGGSEEEEIESKNQEDNQKGIARQDSFSSRSSLQDIPLLLPQEADATDGSGGGHKLNGMNSTNG-SLSFS  640 (1068)
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccCCCCCccccccccccccccccccccc-ccccc
Confidence            99999999999999888888887777778889999998888899999999998766555555555555443332 34677


Q ss_pred             cccccccccccCCCCCCcccCCCCCCcccccccccccCCCCCCCchhhhhhcccCCccCCCCccCCCCCCCCceEEEEec
Q 001322          671 YQKAKIEPVVTDMPMKGFVDDRDSPHHHLKTSLDVMTLPGTKSSDIEWWETQERGDQVGSTDETGQVGPRASCRCQIIRS  750 (1100)
Q Consensus       671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vQilRS  750 (1100)
                      +++.+.+...++.|++++.++....+....+   ..+..+....+.+||++|.+.+|+.+..+.++++++++|.||||||
T Consensus       641 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~QivRS  717 (1068)
T PLN02866        641 FRKSKIEPVLPDTPMKGFVDDLGFLDLSVKM---SSAERGSKESDSEWWETQERGDQVGSADEVGQVGPRVSCRCQVIRS  717 (1068)
T ss_pred             ccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccCCCCeEEEEEEee
Confidence            7888888888999999887765543332211   2233344556678999999999988888888999999999999999


Q ss_pred             CCcccCCCcccHHHHHHHHHHHHHhcccEEEEEeeecccCCCCChHHHHHHHHHHHHHHHHHHHcCCCeEEEEEecCCCC
Q 001322          751 VSQWSAGTSQLEESIHCAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPLLPG  830 (1100)
Q Consensus       751 ~~~WS~G~~~~E~sI~~ayl~aI~~A~hfIYIEnQyFis~~~~~~~v~N~I~~AL~~ri~rA~~~~~gv~V~VVlP~~P~  830 (1100)
                      +++||+|++++|+||++||+++|++|+|||||||||||+++++++.|+|.|++||++||++|+++++.|+|+||||++|+
T Consensus       718 ~~~WS~G~~~~E~SI~~AYi~~I~~A~hfIYIENQFFis~~~~~~~i~N~I~~AL~~RI~rA~~~~~~frviIViP~~P~  797 (1068)
T PLN02866        718 VSQWSAGTSQVEESIHAAYCSLIEKAEHFIYIENQFFISGLSGDDTIQNRVLEALYRRILRAHKEKKCFRVIIVIPLLPG  797 (1068)
T ss_pred             cccccCCCCchHHHHHHHHHHHHHhcccEEEEecccccccccccccccchHHHHHHHHHHHHHhcCCCeEEEEEecCCCC
Confidence            99999999889999999999999999999999999999998788899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHHHHHHHHHHhhhhHHHHHHHHHhcCCCcccccccccccccccccCCCCccccceeeeeeEEEEeC
Q 001322          831 FQGGVDDGGAASVRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLRAYGRLFEDGPVATSQVYVHSKVMIIDD  910 (1100)
Q Consensus       831 F~G~~~~~~~~s~r~im~~qyrtI~rG~~si~~~L~~~~G~~~~~Yi~f~~Lr~~~~~~~~g~~vte~iyvHSKlmIVDD  910 (1100)
                      |+|++.+++++++|+||+|||+|||||++||+++|+++.|.++.+||+||+||+|+++..++++|||+||||||+|||||
T Consensus       798 F~G~v~~~~~~svr~Im~~Q~~tI~rG~~Si~~~L~~~~g~~p~dYisf~~LRn~~~l~~~~~~vteqIYVHsK~~IvDD  877 (1068)
T PLN02866        798 FQGGVDDGGAASVRAIMHWQYRTICRGKNSILHNLYDLLGPKTHDYISFYGLRAYGRLFEGGPLATSQIYVHSKIMIVDD  877 (1068)
T ss_pred             cCCCCCCccchhHHHHHHHHHHHHHhhHHHHHHHHHHHhCCCHHHeEeeecccccccccCCCcccceeeEEEeeEEEEcC
Confidence            99999998889999999999999999999999999998899999999999999999998899999999999999999999


Q ss_pred             cEEEEcccccCcCccCCCCCcceeEEEEcCcccccccCCCCcchhhhHHHHHHHHHhhccCCCccccccccCCCChHHHH
Q 001322          911 SIALIGSANINDRSLLGSRDSEIGVLIEDKESVDSFMGGKPWKAGKLCLSLRLSLWSEHLGLRSREVNQIIDPVIDSTYK  990 (1100)
Q Consensus       911 ~~~iIGSANiN~RSm~G~~DsEi~v~I~d~~~~~s~m~G~~~~ag~fa~~LR~~L~~eHLG~~~~~~~~~~dp~~~~~~~  990 (1100)
                      ++++|||||||+|||+|++|||++++|+|++.+++.|||++|.||+||++||++||+||||+.+++++.+.||++|+||+
T Consensus       878 ~~~iiGSaNiN~RS~~G~rDsEia~~~~d~~~~~s~m~G~~~~ag~fa~~lR~~L~~EHLG~~~~~~~~~~DP~~d~~~k  957 (1068)
T PLN02866        878 RAALIGSANINDRSLLGSRDSEIGVVIEDKEFVDSSMNGKPWKAGKFAHSLRLSLWSEHLGLRAGEIDKIIDPVCDTTYK  957 (1068)
T ss_pred             cEEEEccccccccccccCcCcceeeeeecccccccccCCccccccchhHHHHHHHHHHHhCCCchhhhcccCCccHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhHHHHHHhhCcCCCCccccHHHHHHHHHhhhhhcCCccccCCCCccccccccCCCCCCCCHHHhhcccceE
Q 001322          991 DIWVATARMNTTIYQDVFSCVPNDLIHTRAAIRQNIAFWKEKLGHTTIDLGIAPRNLESYQNGDIQKTDPLERLQAVRGH 1070 (1100)
Q Consensus       991 ~~W~~~a~~Nt~iy~~vF~c~P~d~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~L~~i~G~ 1070 (1100)
                      ++|+.+|++||+||++||+|+|+|.|+||.+|++|.+.||+++||+++|+|++++|++.+++|+++..++.++|++||||
T Consensus       958 ~~W~~~A~~Nt~Iy~~vF~c~P~d~Vr~~~~~~~~~~~~~~~~gh~~i~lg~~~~~~~~~~~~~~~~~~~~~~l~~I~G~ 1037 (1068)
T PLN02866        958 DLWMATAKTNTDIYQDVFSCIPNDLIHSRAALRQSMASRKEKLGHTTIDLGIAPEKLESYENGDIKSSDPMERLKSVRGH 1037 (1068)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcccccHHHHHHHhhhcccccCccccccccccccccccccccchhhhHHHHHhhceEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeecccchhhccCCCCCCCCcccccc-ccCC
Q 001322         1071 LVSFPLDFMCKEDLRPVFNESEYYAA-QVFY 1100 (1100)
Q Consensus      1071 lV~~Pl~Fl~~e~l~p~~~~~e~~~~-~~~~ 1100 (1100)
                      ||+|||+|||+|||+|++++||||+| ||||
T Consensus      1038 lV~fPL~Fl~~E~L~p~~~~~e~~~~~~~~~ 1068 (1068)
T PLN02866       1038 LVSFPLDFMCQEDLRPVFNESEYYASPQVFH 1068 (1068)
T ss_pred             EEechhhhhhhccCCCCcCccceecCccccC
Confidence            99999999999999999999999999 9999

>KOG1329 consensus Phospholipase D1 [Lipid transport and metabolism]	Back alignment and domain information

>PLN02352 phospholipase D epsilon	Back alignment and domain information

>PLN03008 Phospholipase D delta	Back alignment and domain information

>PLN02270 phospholipase D alpha	Back alignment and domain information

>PRK12452 cardiolipin synthetase; Reviewed	Back alignment and domain information

>PRK01642 cls cardiolipin synthetase; Reviewed	Back alignment and domain information

>PRK11263 cardiolipin synthase 2; Provisional	Back alignment and domain information

>COG1502 Cls Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes [Lipid metabolism]	Back alignment and domain information

>PRK09428 pssA phosphatidylserine synthase; Provisional	Back alignment and domain information

>PHA02820 phospholipase-D-like protein; Provisional	Back alignment and domain information

>PHA03003 palmytilated EEV membrane glycoprotein; Provisional	Back alignment and domain information

>cd07297 PX_PLD2 The phosphoinositide binding Phox Homology domain of Phospholipase D2	Back alignment and domain information

>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain	Back alignment and domain information

>cd07296 PX_PLD1 The phosphoinositide binding Phox Homology domain of Phospholipase D1	Back alignment and domain information

>cd06895 PX_PLD The phosphoinositide binding Phox Homology domain of Phospholipase D	Back alignment and domain information

>PRK05443 polyphosphate kinase; Provisional	Back alignment and domain information

>TIGR03705 poly_P_kin polyphosphate kinase 1	Back alignment and domain information

>cd00138 PLDc Phospholipase D	Back alignment and domain information

>PHA02820 phospholipase-D-like protein; Provisional	Back alignment and domain information

>cd00138 PLDc Phospholipase D	Back alignment and domain information

>KOG3603 consensus Predicted phospholipase D [General function prediction only]	Back alignment and domain information

>PRK12452 cardiolipin synthetase; Reviewed	Back alignment and domain information

>PRK13912 nuclease NucT; Provisional	Back alignment and domain information

>PRK13912 nuclease NucT; Provisional	Back alignment and domain information

>PHA03003 palmytilated EEV membrane glycoprotein; Provisional	Back alignment and domain information

>cd06875 PX_IRAS The phosphoinositide binding Phox Homology domain of the Imidazoline Receptor Antisera-Selected	Back alignment and domain information

>PF13091 PLDc_2: PLD-like domain; PDB: 2ZE4_A 2ZE9_A 1BYS_A 1BYR_A 1V0T_A 1V0U_A 1V0V_A 1V0S_A 1V0R_A 1V0W_A	Back alignment and domain information

>PF13091 PLDc_2: PLD-like domain; PDB: 2ZE4_A 2ZE9_A 1BYS_A 1BYR_A 1V0T_A 1V0U_A 1V0V_A 1V0S_A 1V0R_A 1V0W_A	Back alignment and domain information

>PRK01642 cls cardiolipin synthetase; Reviewed	Back alignment and domain information

>cd06878 PX_SNX25 The phosphoinositide binding Phox Homology domain of Sorting Nexin 25	Back alignment and domain information

>cd06872 PX_SNX19_like_plant The phosphoinositide binding Phox Homology domain of uncharacterized SNX19-like plant proteins	Back alignment and domain information

>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]	Back alignment and domain information

>PRK11263 cardiolipin synthase 2; Provisional	Back alignment and domain information

>PF00787 PX: PX domain; InterPro: IPR001683 The PX (phox) domain [] occurs in a variety of eukaryotic proteins and have been implicated in highly diverse functions such as cell signalling, vesicular trafficking, protein sorting and lipid modification [, , ]	Back alignment and domain information

>cd06880 PX_SNX22 The phosphoinositide binding Phox Homology domain of Sorting Nexin 22	Back alignment and domain information

>cd06871 PX_MONaKA The phosphoinositide binding Phox Homology domain of Modulator of Na,K-ATPase	Back alignment and domain information

>cd06877 PX_SNX14 The phosphoinositide binding Phox Homology domain of Sorting Nexin 14	Back alignment and domain information

>cd06870 PX_CISK The phosphoinositide binding Phox Homology Domain of Cytokine-Independent Survival Kinase	Back alignment and domain information

>PRK09428 pssA phosphatidylserine synthase; Provisional	Back alignment and domain information

>cd06897 PX_SNARE The phosphoinositide binding Phox Homology domain of SNARE proteins from fungi	Back alignment and domain information

>cd06882 PX_p40phox The phosphoinositide binding Phox Homology domain of the p40phox subunit of NADPH oxidase	Back alignment and domain information

>cd07276 PX_SNX16 The phosphoinositide binding Phox Homology domain of Sorting Nexin 16	Back alignment and domain information

>PF00614 PLDc: Phospholipase D Active site motif; InterPro: IPR001736 Phosphatidylcholine-hydrolysing phospholipase D (PLD) isoforms are activated by ADP-ribosylation factors (ARFs)	Back alignment and domain information

>cd06883 PX_PI3K_C2 The phosphoinositide binding Phox Homology Domain of Class II Phosphoinositide 3-Kinases	Back alignment and domain information

>cd06876 PX_MDM1p The phosphoinositide binding Phox Homology domain of yeast MDM1p	Back alignment and domain information

>PRK05443 polyphosphate kinase; Provisional	Back alignment and domain information

>cd06890 PX_Bem1p The phosphoinositide binding Phox Homology domain of Bem1p	Back alignment and domain information

>cd06873 PX_SNX13 The phosphoinositide binding Phox Homology domain of Sorting Nexin 13	Back alignment and domain information

>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain	Back alignment and domain information

>smart00312 PX PhoX homologous domain, present in p47phox and p40phox	Back alignment and domain information

>cd07279 PX_SNX20_21_like The phosphoinositide binding Phox Homology domain of Sorting Nexins 20 and 21	Back alignment and domain information

>cd07280 PX_YPT35 The phosphoinositide binding Phox Homology domain of the fungal protein YPT35	Back alignment and domain information

>cd06884 PX_PI3K_C2_68D The phosphoinositide binding Phox Homology Domain of Class II Phosphoinositide 3-Kinases similar to the Drosophila PI3K_68D protein	Back alignment and domain information

>cd06881 PX_SNX15_like The phosphoinositide binding Phox Homology domain of Sorting Nexin 15-like proteins	Back alignment and domain information

>cd06887 PX_p47phox The phosphoinositide binding Phox Homology domain of the p47phox subunit of NADPH oxidase	Back alignment and domain information

>cd07300 PX_SNX20 The phosphoinositide binding Phox Homology domain of Sorting Nexin 20	Back alignment and domain information

>cd06886 PX_SNX27 The phosphoinositide binding Phox Homology domain of Sorting Nexin 27	Back alignment and domain information

>cd06874 PX_KIF16B_SNX23 The phosphoinositide binding Phox Homology domain of KIF16B kinesin or Sorting Nexin 23	Back alignment and domain information

>cd06869 PX_UP2_fungi The phosphoinositide binding Phox Homology domain of uncharacterized fungal proteins	Back alignment and domain information

>cd06888 PX_FISH The phosphoinositide binding Phox Homology domain of Five SH protein	Back alignment and domain information

>cd07277 PX_RUN The phosphoinositide binding Phox Homology domain of uncharacterized proteins containing PX and RUN domains	Back alignment and domain information

>cd06867 PX_SNX41_42 The phosphoinositide binding Phox Homology domain of fungal Sorting Nexins 41 and 42	Back alignment and domain information

>cd07301 PX_SNX21 The phosphoinositide binding Phox Homology domain of Sorting Nexin 21	Back alignment and domain information

>cd06093 PX_domain The Phox Homology domain, a phosphoinositide binding module	Back alignment and domain information

>cd06865 PX_SNX_like The phosphoinositide binding Phox Homology domain of SNX-like proteins	Back alignment and domain information

>COG1502 Cls Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes [Lipid metabolism]	Back alignment and domain information

>cd07289 PX_PI3K_C2_alpha The phosphoinositide binding Phox Homology Domain of the Alpha Isoform of Class II Phosphoinositide 3-Kinases	Back alignment and domain information

>cd06861 PX_Vps5p The phosphoinositide binding Phox Homology domain of yeast sorting nexin Vps5p	Back alignment and domain information

>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain	Back alignment and domain information

>cd07282 PX_SNX2 The phosphoinositide binding Phox Homology domain of Sorting Nexin 2	Back alignment and domain information

>cd06859 PX_SNX1_2_like The phosphoinositide binding Phox Homology domain of Sorting Nexins 1 and 2	Back alignment and domain information

>cd06862 PX_SNX9_18_like The phosphoinositide binding Phox Homology domain of Sorting Nexins 9 and 18	Back alignment and domain information

>cd01238 PH_Tec Tec pleckstrin homology (PH) domain	Back alignment and domain information

>cd06864 PX_SNX4 The phosphoinositide binding Phox Homology domain of Sorting Nexin 4	Back alignment and domain information

>cd06879 PX_UP1_plant The phosphoinositide binding Phox Homology domain of uncharacterized plant proteins	Back alignment and domain information

>smart00155 PLDc Phospholipase D	Back alignment and domain information

>cd06898 PX_SNX10 The phosphoinositide binding Phox Homology domain of Sorting Nexin 10	Back alignment and domain information

>cd06868 PX_HS1BP3 The phosphoinositide binding Phox Homology domain of HS1BP3	Back alignment and domain information

>cd07281 PX_SNX1 The phosphoinositide binding Phox Homology domain of Sorting Nexin 1	Back alignment and domain information

>cd07287 PX_RPK118_like The phosphoinositide binding Phox Homology domain of RPK118-like proteins	Back alignment and domain information

>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain	Back alignment and domain information

>cd06893 PX_SNX19 The phosphoinositide binding Phox Homology domain of Sorting Nexin 19	Back alignment and domain information

>cd06885 PX_SNX17_31 The phosphoinositide binding Phox Homology domain of Sorting Nexins 17 and 31	Back alignment and domain information

>KOG3603 consensus Predicted phospholipase D [General function prediction only]	Back alignment and domain information

>cd06863 PX_Atg24p The phosphoinositide binding Phox Homology domain of yeast Atg24p, an autophagic degradation protein	Back alignment and domain information

>cd06866 PX_SNX8_Mvp1p_like The phosphoinositide binding Phox Homology domain of Sorting Nexin 8 and yeast Mvp1p	Back alignment and domain information

>cd07288 PX_SNX15 The phosphoinositide binding Phox Homology domain of Sorting Nexin 15	Back alignment and domain information

>cd06894 PX_SNX3_like The phosphoinositide binding Phox Homology domain of Sorting Nexin 3 and related proteins	Back alignment and domain information

>cd07295 PX_Grd19 The phosphoinositide binding Phox Homology domain of fungal Grd19	Back alignment and domain information

>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain	Back alignment and domain information

>cd07293 PX_SNX3 The phosphoinositide binding Phox Homology domain of Sorting Nexin 3	Back alignment and domain information

>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain	Back alignment and domain information

>cd07294 PX_SNX12 The phosphoinositide binding Phox Homology domain of Sorting Nexin 12	Back alignment and domain information

>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]	Back alignment and domain information

>cd07285 PX_SNX9 The phosphoinositide binding Phox Homology domain of Sorting Nexin 9	Back alignment and domain information

>cd06889 PX_NoxO1 The phosphoinositide binding Phox Homology domain of Nox Organizing protein 1	Back alignment and domain information

>cd07286 PX_SNX18 The phosphoinositide binding Phox Homology domain of Sorting Nexin 18	Back alignment and domain information

>cd07290 PX_PI3K_C2_beta The phosphoinositide binding Phox Homology Domain of the Beta Isoform of Class II Phosphoinositide 3-Kinases	Back alignment and domain information

>cd06860 PX_SNX7_30_like The phosphoinositide binding Phox Homology domain of Sorting Nexins 7 and 30	Back alignment and domain information

>cd01264 PH_melted Melted pleckstrin homology (PH) domain	Back alignment and domain information

>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain	Back alignment and domain information

>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain	Back alignment and domain information

>PF00614 PLDc: Phospholipase D Active site motif; InterPro: IPR001736 Phosphatidylcholine-hydrolysing phospholipase D (PLD) isoforms are activated by ADP-ribosylation factors (ARFs)	Back alignment and domain information

>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain	Back alignment and domain information

>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain	Back alignment and domain information

>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain	Back alignment and domain information

>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain	Back alignment and domain information

>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain	Back alignment and domain information

>cd07283 PX_SNX30 The phosphoinositide binding Phox Homology domain of Sorting Nexin 30	Back alignment and domain information

>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain	Back alignment and domain information

>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C	Back alignment and domain information

>cd07284 PX_SNX7 The phosphoinositide binding Phox Homology domain of Sorting Nexin 7	Back alignment and domain information

>smart00233 PH Pleckstrin homology domain	Back alignment and domain information

>KOG3964 consensus Phosphatidylglycerolphosphate synthase [Lipid transport and metabolism]	Back alignment and domain information

>smart00155 PLDc Phospholipase D	Back alignment and domain information

>PF15409 PH_8: Pleckstrin homology domain	Back alignment and domain information

>cd01241 PH_Akt Akt pleckstrin homology (PH) domain	Back alignment and domain information

>TIGR03705 poly_P_kin polyphosphate kinase 1	Back alignment and domain information

>PLN02866 phospholipase D	Back alignment and domain information

>PF13918 PLDc_3: PLD-like domain	Back alignment and domain information

>PF07894 DUF1669: Protein of unknown function (DUF1669); InterPro: IPR012461 This family is composed of sequences derived from hypothetical eukaryotic proteins of unknown function	Back alignment and domain information

>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain	Back alignment and domain information

>cd06896 PX_PI3K_C2_gamma The phosphoinositide binding Phox Homology Domain of the Gamma Isoform of Class II Phosphoinositide 3-Kinases	Back alignment and domain information

>cd00821 PH Pleckstrin homology (PH) domain	Back alignment and domain information

>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain	Back alignment and domain information

>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain	Back alignment and domain information

>PF11495 Regulator_TrmB: Archaeal transcriptional regulator TrmB; InterPro: IPR021586 TrmB is an alpha-glucoside sensing transcriptional regulator	Back alignment and domain information

>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain	Back alignment and domain information

>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain	Back alignment and domain information

>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain	Back alignment and domain information

>cd00900 PH-like Pleckstrin homology-like domain	Back alignment and domain information

>PF13918 PLDc_3: PLD-like domain	Back alignment and domain information

>KOG0930 consensus Guanine nucleotide exchange factor Cytohesin, contains PH and Sec7 domains [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>cd06891 PX_Vps17p The phosphoinositide binding Phox Homology domain of yeast sorting nexin Vps17p	Back alignment and domain information

>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A	Back alignment and domain information

>PLN02352 phospholipase D epsilon	Back alignment and domain information

>PLN03008 Phospholipase D delta	Back alignment and domain information

>KOG2527 consensus Sorting nexin SNX11 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>cd07299 PX_TCGAP The phosphoinositide binding Phox Homology domain of Tc10/Cdc42 GTPase-activating protein	Back alignment and domain information

>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain	Back alignment and domain information

>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain	Back alignment and domain information

>PLN02270 phospholipase D alpha	Back alignment and domain information

>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain	Back alignment and domain information

>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A	Back alignment and domain information

>KOG1329 consensus Phospholipase D1 [Lipid transport and metabolism]	Back alignment and domain information

>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain	Back alignment and domain information

>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms]	Back alignment and domain information

>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain	Back alignment and domain information

>cd07291 PX_SNX5 The phosphoinositide binding Phox Homology domain of Sorting Nexin 5	Back alignment and domain information

>PF07894 DUF1669: Protein of unknown function (DUF1669); InterPro: IPR012461 This family is composed of sequences derived from hypothetical eukaryotic proteins of unknown function	Back alignment and domain information

>cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain	Back alignment and domain information

>cd07292 PX_SNX6 The phosphoinositide binding Phox Homology domain of Sorting Nexin 6	Back alignment and domain information

>KOG2273 consensus Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain	Back alignment and domain information

>cd06892 PX_SNX5_like The phosphoinositide binding Phox Homology domain of Sorting Nexins 5 and 6	Back alignment and domain information

>cd07278 PX_RICS_like The phosphoinositide binding Phox Homology domain of PX-RICS-like proteins	Back alignment and domain information

>cd07298 PX_RICS The phosphoinositide binding Phox Homology domain of PX-RICS	Back alignment and domain information

>KOG0905 consensus Phosphoinositide 3-kinase [Signal transduction mechanisms]	Back alignment and domain information

>PF13090 PP_kinase_C: Polyphosphate kinase C-terminal domain; PDB: 2O8R_A 1XDP_A 1XDO_B	Back alignment and domain information

>PF13090 PP_kinase_C: Polyphosphate kinase C-terminal domain; PDB: 2O8R_A 1XDP_A 1XDO_B	Back alignment and domain information

>KOG1117 consensus Rho- and Arf-GTPase activating protein ARAP3 [Signal transduction mechanisms; Cytoskeleton]	Back alignment and domain information

>COG3886 Predicted HKD family nuclease [DNA replication, recombination, and repair]	Back alignment and domain information

>KOG3723 consensus PH domain protein Melted [Signal transduction mechanisms]	Back alignment and domain information

>COG0855 Ppk Polyphosphate kinase [Inorganic ion transport and metabolism]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		1100
1v0w_A		506	Phospholipase D; hydrolase, substrate SOAK, dibuty	2e-11
1v0w_A		506	Phospholipase D; hydrolase, substrate SOAK, dibuty	5e-11
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-09
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-04
3hsi_A		458	Phosphatidylserine synthase; CDP- diacylglycerol--	2e-09
3hsi_A		458	Phosphatidylserine synthase; CDP- diacylglycerol--	9e-07
1wgq_A		109	FYVE, rhogef and PH domain containing 6; ethanol d	2e-06
1byr_A		155	Protein (endonuclease); phosphodiesterase,; 2.00A	2e-06
1byr_A		155	Protein (endonuclease); phosphodiesterase,; 2.00A	3e-04
2da0_A		114	130-kDa phosphatidylinositol 4,5-biphosphate- depe	3e-06
2dn6_A		115	KIAA0640 protein; PH domain, structural genomics,	4e-06
1u5d_A		108	SKAP55, SRC kinase-associated phosphoprotein of 55	4e-06
1u5e_A		211	SRC-associated adaptor protein; novel dimerization	7e-06
1fgy_A		127	GRP1; PH domain, signaling protein; HET: 4IP; 1.50	7e-06
1dro_A		122	Beta-spectrin; cytoskeleton; NMR {Drosophila melan	1e-05
3cxb_B		112	Pleckstrin homology domain-containing family M mem	2e-05
1u5f_A		148	SRC-associated adaptor protein; PH domain of SKAP-	3e-05
2j59_M		168	RHO-GTPase activating protein 10; ARF, ARF1, ARFBD	5e-05
1btn_A		106	Beta-spectrin; signal transduction protein; HET: I	5e-05
1upq_A		123	PEPP1; PH domain, phosphoinositide binding, signal	5e-05
1eaz_A		125	Tandem PH domain containing protein-1; lipid-bindi	9e-05
2dkp_A		128	Pleckstrin homology domain-containing family A mem	1e-04
1v5p_A		126	Pleckstrin homology domain-containing, family A; T	1e-04
3tfm_A		228	Myosin X; split PH domain, motor protein; 2.53A {R	1e-04
1wjm_A		123	Beta-spectrin III; PH domain, signal transduction,	2e-04
2coc_A		112	FYVE, rhogef and PH domain containing protein 3; s	2e-04
2d9y_A		117	Pleckstrin homology domain-containing protein fami	4e-04
2rsg_A		94	Collagen type IV alpha-3-binding protein; pleckstr	4e-04
3a8n_A		279	TIAM-1, T-lymphoma invasion and metastasis-inducin	4e-04
1x1f_A		149	Signal-transducing adaptor protein 1; docking prot	4e-04
3pp2_A		124	RHO GTPase-activating protein 27; PH domain, GTPas	4e-04
1fao_A		126	Dual adaptor of phosphotyrosine and 3- phosphoinos	5e-04
2yry_A		122	Pleckstrin homology domain-containing family A mem	7e-04
3aj4_A		112	Pleckstrin homology domain-containing family B ME;	8e-04
3a8p_A		263	T-lymphoma invasion and metastasis-inducing protei	9e-04

>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A* Length = 506	Back alignment and structure

 Score = 67.0 bits (163), Expect = 2e-11
 Identities = 32/178 (17%), Positives = 62/178 (34%), Gaps = 25/178 (14%)

Query: 768 AYCSLIEKAEHFIYIENQF----FISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVII 823
           A  +L+  A+  I I  Q            D  + + +   +   +          +V I
Sbjct: 318 ALRALVASAKGHIEISQQDLNATCPPLPRYDIRLYDALAAKMAAGV----------KVRI 367

Query: 824 VIPLLPGFQGGVDDGGAASVRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLR 883
           V+      +G V  GG + ++++         R  N       A     ++  ++ +   
Sbjct: 368 VVSDPAN-RGAVGSGGYSQIKSLSEISDTLRNRLANITGGQQAAKTAMCSNLQLATFRSS 426

Query: 884 AYGRLFEDGPVATSQVYVHSKVMIIDDSIALIGSANINDRSLLGSRDSEIGVLIEDKE 941
             G+  +  P A      H K++ +D S   IGS N+    L      + G ++E  E
Sbjct: 427 PNGKWADGHPYA-----QHHKLVSVDSSTFYIGSKNLYPSWL-----QDFGYIVESPE 474

PyMOL of 1v0w

>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A* Length = 506	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae} Length = 458	Back alignment and structure

>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae} Length = 458	Back alignment and structure

>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 Length = 109	Back alignment and structure

>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A Length = 155	Back alignment and structure

>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A Length = 155	Back alignment and structure

>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 114	Back alignment and structure

>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115	Back alignment and structure

>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1 Length = 108	Back alignment and structure

>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A Length = 211	Back alignment and structure

>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A* Length = 127	Back alignment and structure

>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1 Length = 122	Back alignment and structure

>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B Length = 112	Back alignment and structure

>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A Length = 148	Back alignment and structure

>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A Length = 168	Back alignment and structure

>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A Length = 106	Back alignment and structure

>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A* Length = 123	Back alignment and structure

>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1 Length = 125	Back alignment and structure

>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens} Length = 128	Back alignment and structure

>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 Length = 126	Back alignment and structure

>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus} Length = 228	Back alignment and structure

>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 123	Back alignment and structure

>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 112	Back alignment and structure

>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 117	Back alignment and structure

>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens} Length = 94	Back alignment and structure

>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus} Length = 279	Back alignment and structure

>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 149	Back alignment and structure

>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens} Length = 124	Back alignment and structure

>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A Length = 126	Back alignment and structure

>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 122	Back alignment and structure

>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A Length = 112	Back alignment and structure

>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A Length = 263	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		1100
1v0w_A		506	Phospholipase D; hydrolase, substrate SOAK, dibuty	100.0
3hsi_A		458	Phosphatidylserine synthase; CDP- diacylglycerol--	100.0
1xdp_A		687	Polyphosphate kinase; PPK, PPK complex with AMPPNP	99.85
2o8r_A		705	Polyphosphate kinase; structural genomics, protein	99.82
4ggj_A		196	Mitochondrial cardiolipin hydrolase; piRNA pathway	99.57
1byr_A		155	Protein (endonuclease); phosphodiesterase,; 2.00A	99.47
1byr_A		155	Protein (endonuclease); phosphodiesterase,; 2.00A	99.46
4gel_A		220	Mitochondrial cardiolipin hydrolase; piRNA, phosph	99.38
4ggj_A		196	Mitochondrial cardiolipin hydrolase; piRNA pathway	99.36
3p0c_A		130	Nischarin; structural genomics, structural genomic	99.08
1xdp_A		687	Polyphosphate kinase; PPK, PPK complex with AMPPNP	99.06
3hsi_A		458	Phosphatidylserine synthase; CDP- diacylglycerol--	99.02
4gel_A		220	Mitochondrial cardiolipin hydrolase; piRNA, phosph	99.02
2ett_A		128	Sorting nexin-22; PX domain, BC019655, SNX22_human	99.01
4az9_A		129	Sorting nexin-24; protein transport; 1.75A {Homo s	99.01
1h6h_A		143	Neutrophil cytosol factor 4; PX domain; HET: PIB;	98.98
1kq6_A		141	NCF-1, P47PHOX, neutrophil cytosol factor 1; alpha	98.97
1xte_A		154	Serine/threonine-protein kinase SGK3; CISK, PX dom	98.93
1v0w_A		506	Phospholipase D; hydrolase, substrate SOAK, dibuty	98.89
2v6v_A		156	BUD emergence protein 1; homotypic fusion, regulat	98.81
3lui_A		115	Sorting nexin-17, SNX17; PX domain, endosome, phos	98.8
2ar5_A		121	Phosphoinositide 3-kinase; PX domain, transferase;	98.66
2csk_A		146	Sorting nexin 12; SNX12, PX domain, structural gen	98.63
2i4k_A		128	Sorting nexin-1, SNX1; 3-stranded beta sheet, 3 al	98.63
2iwl_X		140	Phosphatidylinositol-4-phosphate 3-kinase C2 domai	98.61
2v14_A		134	Kinesin-like motor protein C20ORF23; plus-END kine	98.61
1ocs_A		162	Sorting nexin GRD19; sorting protein, PX-domain, y	98.57
3iq2_A		138	Sorting nexin-7; SNX7, PHOX, protein signalling, S	98.57
2l73_A		149	NADPH oxidase organizer 1; cell membrane, PX domai	98.55
1kmd_A		117	VAM7P, vacuolar morphogenesis protein VAM7; PX dom	98.5
1u5d_A		108	SKAP55, SRC kinase-associated phosphoprotein of 55	98.46
1pls_A		113	Pleckstrin homology domain; phosphorylation; NMR {	98.45
2rsg_A		94	Collagen type IV alpha-3-binding protein; pleckstr	98.4
2dn6_A		115	KIAA0640 protein; PH domain, structural genomics,	98.39
1u5f_A		148	SRC-associated adaptor protein; PH domain of SKAP-	98.37
2d9y_A		117	Pleckstrin homology domain-containing protein fami	98.37
1upq_A		123	PEPP1; PH domain, phosphoinositide binding, signal	98.36
2yry_A		122	Pleckstrin homology domain-containing family A mem	98.36
2cod_A		115	Centaurin-delta 1; ARF GAP and RHO GAP with ankyri	98.34
1v5u_A		117	SBF1, SET binding factor 1; MTMR5, the pleckstrin	98.34
1v5p_A		126	Pleckstrin homology domain-containing, family A; T	98.33
2da0_A		114	130-kDa phosphatidylinositol 4,5-biphosphate- depe	98.33
2dkp_A		128	Pleckstrin homology domain-containing family A mem	98.32
2dhk_A		119	TBC1 domain family member 2; PH domain, paris-1, s	98.32
1v89_A		118	Hypothetical protein KIAA0053; pleckstrin homology	98.31
1wi1_A		126	Calcium-dependent activator protein for secretion,	98.31
1wgq_A		109	FYVE, rhogef and PH domain containing 6; ethanol d	98.31
1eaz_A		125	Tandem PH domain containing protein-1; lipid-bindi	98.3
1fao_A		126	Dual adaptor of phosphotyrosine and 3- phosphoinos	98.3
1fgy_A		127	GRP1; PH domain, signaling protein; HET: 4IP; 1.50	98.27
1v88_A		130	Oxysterol binding protein-related protein 8; vesic	98.25
2d9v_A		130	Pleckstrin homology domain-containing protein fami	98.25
1x1f_A		149	Signal-transducing adaptor protein 1; docking prot	98.24
2cof_A		107	Protein KIAA1914; PH domain, structural genomics,	98.22
2lul_A		164	Tyrosine-protein kinase TEC; structural genomics,	98.2
1dyn_A		125	Dynamin; signal transduction protein; 2.20A {Homo	98.19
3aj4_A		112	Pleckstrin homology domain-containing family B ME;	98.18
1btk_A		169	Bruton'S tyrosine kinase; transferase, PH domain,	98.11
2i5f_A		109	Pleckstrin; PH domain, protein-inositol phosphate	98.11
3rcp_A		103	Pleckstrin homology domain-containing family A ME;	98.1
3tfm_A		228	Myosin X; split PH domain, motor protein; 2.53A {R	98.08
2wwe_A		127	Phosphoinositide-3-kinase, class 2, gamma polypept	98.07
3dyt_A		366	Sorting nexin-9; 3-helix bundle, BAR domain, PX do	98.06
1x05_A		129	Pleckstrin; PH domain, structural genomics, NPPSFA	98.05
1u5e_A		211	SRC-associated adaptor protein; novel dimerization	98.04
2coc_A		112	FYVE, rhogef and PH domain containing protein 3; s	98.03
2j59_M		168	RHO-GTPase activating protein 10; ARF, ARF1, ARFBD	98.03
2dyb_A		341	Neutrophil cytosol factor 4; P40(PHOX), NADPH oxid	98.03
4a6h_A		120	Phosphatidylinositol 4,5-bisphosphate-binding Pro	98.02
3cxb_B		112	Pleckstrin homology domain-containing family M mem	98.01
1wg7_A		150	Dedicator of cytokinesis protein 9; pleckstrin hom	98.0
1btn_A		106	Beta-spectrin; signal transduction protein; HET: I	97.99
4akv_A		386	Sorting nexin-33; transport protein, organelle bio	97.98
2p0d_A		129	RHO GTPase-activating protein 9; protein-phosphoin	97.98
1unq_A		125	RAC-alpha serine/threonine kinase; transferase, pl	97.98
1x1g_A		129	Pleckstrin 2; PH domain, structural genomics, rike	97.96
2d9x_A		120	Oxysterol binding protein-related protein 11; PH d	97.95
2y7b_A		134	Actin-binding protein anillin; cell cycle; 1.90A {	97.95
2o8r_A		705	Polyphosphate kinase; structural genomics, protein	97.93
1wjm_A		123	Beta-spectrin III; PH domain, signal transduction,	97.88
3lju_X		386	ARF-GAP with dual PH domain-containing protein 1;	97.82
2q13_A		385	DCC-interacting protein 13 alpha; APPL1, BAR domai	97.73
2w2x_D		124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	97.68
2rlo_A		128	Centaurin-gamma 1; split PH domain, alternative sp	97.67
2r09_A		347	Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-ph	97.66
3a8p_A		263	T-lymphoma invasion and metastasis-inducing protei	97.6
1qqg_A		264	IRS-1, insulin receptor substrate 1; beta-sandwhic	97.58
2ys3_A		137	UNC-112-related protein 2; PH domain, kindlin-3, s	97.57
3tca_A		291	Amyloid beta A4 precursor protein-binding family 1	97.54
3lju_X		386	ARF-GAP with dual PH domain-containing protein 1;	97.54
1dro_A		122	Beta-spectrin; cytoskeleton; NMR {Drosophila melan	97.52
4h8s_A		407	DCC-interacting protein 13-beta; BAR domain, pleck	97.34
3hk0_A		256	Growth factor receptor-bound protein 10; GRB10, RA	97.32
3hpc_X		161	SNX5 protein; sprting nexin, PHOX, SNX5-PX, phosph	97.3
2dtc_A		126	RAL guanine nucleotide exchange factor ralgps1A; P	97.25
3pp2_A		124	RHO GTPase-activating protein 27; PH domain, GTPas	97.23
2rov_A		117	RHO-associated protein kinase 2; ATP-binding, coil	97.15
4f7h_A		173	Fermitin family homolog 2; beta-barrel, membrane b	96.99
1w1g_A		151	HPDK1, 3-phosphoinositide dependent protein kinase	96.72
4gmv_A		281	RAS-associated and pleckstrin homology domains-CO	96.66
4bbk_A		165	Kindlin-1, fermitin family homolog 1; PH domain, c	96.65
2fjl_A		150	1-phosphatidylinositol-4,5-bisphosphate phosphodie	96.59
4ejn_A		446	RAC-alpha serine/threonine-protein kinase; AKT1, a	96.37
3qph_A		342	TRMB, A global transcription regulator; transcript	96.19
3qph_A		342	TRMB, A global transcription regulator; transcript	95.75
3a8n_A		279	TIAM-1, T-lymphoma invasion and metastasis-inducin	94.35
2d9w_A		127	Docking protein 2; PH domain, structural genomics,	94.19
2f5t_X		233	Archaeal transcriptional regulator TRMB; sugar-bin	93.73
3tfm_A		228	Myosin X; split PH domain, motor protein; 2.53A {R	91.42
2c1l_A		358	Restriction endonuclease; BFII, domain fusion, hyd	84.6

>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A*	Back alignment and structure

Probab=100.00  E-value=4.6e-37  Score=366.09  Aligned_cols=160  Identities=21%  Similarity=0.263  Sum_probs=115.5

Q ss_pred             CCeEEEEecHHHHHHHHHHHHHhcccEEEEeeecCCceeEE-EcCCCCchhHHHHHHHHHHhhCC--cEEEEEEechhhh
Q 001322          362 GSQAQWFVDGKAAFEAIASSIEDAKSEIFICGWWLCPELYL-RRPFHNHASSRLDALLEAKAKQG--VQIYILLYKEVAL  438 (1100)
Q Consensus       362 gn~v~~lvdG~~~f~al~~aI~~Ak~sI~I~~WwlsPe~yL-~rp~~~~~~~rL~~lL~~aA~rG--VkVrILl~d~~~~  438 (1100)
                      ++.+.++.+|+++|++|+++|++||++|+|       ++|+ +++  +..+.+|.++|++||+||  |+||||+++ .+.
T Consensus        55 ~~~~~~~~~g~~~~~~l~~~I~~Ak~~I~i-------~~y~~~~~--d~~g~~i~~aL~~aa~rGp~V~Vril~D~-~g~  124 (506)
T 1v0w_A           55 DDKCADRVGTKRLLAKMTENIGNATRTVDI-------STLAPFPN--GAFQDAIVAGLKESAAKGNKLKVRILVGA-APV  124 (506)
T ss_dssp             CTTCCCCHHHHHHHHHHHHHHHTCSSEEEE-------EEESSCCC--HHHHHHHHHHHHHHHHTTCCEEEEEEEEC-CC-
T ss_pred             CceeEEecCHHHHHHHHHHHHHHhccEEEE-------EEeeccCC--ChHHHHHHHHHHHHHhCCCCcEEEEEEeC-ccc
Confidence            455778889999999999999999999999       4555 353  556889999999999999  999999754 221


Q ss_pred             H--hhcchhhhHHHhhc----cCCCeEEEE--cCCCcccCcccccCcceEEEEeCcEEEEccccCCCCCcCCCCCCCCCC
Q 001322          439 A--LKINSVYSKRKLLS----IHENVRVLR--YPDHFASGVYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTFEHKIGDN  510 (1100)
Q Consensus       439 ~--l~~~s~~~k~~L~~----l~~nI~V~r--~p~~~~~~~~~~~hHqKivVID~~vAfvGGiNL~~GRwDt~~H~l~D~  510 (1100)
                      .  ......+. +.|..    ..+++.+..  +...  . ..+.+||+|++|||+++||+||+|++.++|+         
T Consensus       125 ~~~~~~~~~~~-~~L~~~g~~~~~~~~~~~~~~~~~--~-~~~~r~H~K~~ViD~~~a~~Gg~Nl~~d~y~---------  191 (506)
T 1v0w_A          125 YHMNVIPSKYR-DELTAKLGKAAENITLNVASMTTS--K-TAFSWNHSKILVVDGQSALTGGINSWKDDYL---------  191 (506)
T ss_dssp             -CCCCHHHHHH-HHHHHHHGGGGGGEEEEEEEECSB--T-TTTBCBCCCEEEETTTEEEEESCCCCHHHHT---------
T ss_pred             cccccCCHHHH-HHHHhcccceeecCcccccccccc--C-CccccceeeEEEECCcEEEeeccccCccccc---------
Confidence            1  01112222 23332    123444431  1100  0 1224899999999999999999999644442         


Q ss_pred             CCCCCCCCCCCCCCCCCCCCccccccccccCCCCCCCCeEEEEEEEEChHHHHHHHHHHHHHHhhhc
Q 001322          511 PPLIWPGKDYYNPRESEPNSWEDTMRDELDRGKYPRMPWHDIHCALWGPPCRDVARHFVQRWNYAKR  577 (1100)
Q Consensus       511 ~~~~~pG~dY~n~r~~d~~~~~~~~~~~ldr~~~~r~pWhDv~~~v~Gpaa~dl~~~F~qrWn~~~~  577 (1100)
                                 +.                      ..+|||++++++||+|.++++.|.++|+....
T Consensus       192 -----------~~----------------------~~~~~D~~v~i~G~~v~~l~~~F~~~W~~~~~  225 (506)
T 1v0w_A          192 -----------DT----------------------THPVSDVDLALTGPAAGSAGRYLDTLWTWTCQ  225 (506)
T ss_dssp             -----------SS----------------------SSCCBEEEEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred             -----------cC----------------------CCCceEEEEEEECHHHHHHHHHHHHHHhhhcc
Confidence                       20                      13899999999999999999999999998764

PyMOL of 1v0w

>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae}	Back alignment and structure

>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*	Back alignment and structure

>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4	Back alignment and structure

>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A	Back alignment and structure

>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A	Back alignment and structure

>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A	Back alignment and structure

>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A	Back alignment and structure

>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A	Back alignment and structure

>3p0c_A Nischarin; structural genomics, structural genomics consortium, SGC, PX signaling protein; 2.27A {Homo sapiens}	Back alignment and structure

>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*	Back alignment and structure

>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae}	Back alignment and structure

>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A	Back alignment and structure

>2ett_A Sorting nexin-22; PX domain, BC019655, SNX22_human, HS.157607, structural genomics,protein structure initiative PSI; NMR {Homo sapiens}	Back alignment and structure

>4az9_A Sorting nexin-24; protein transport; 1.75A {Homo sapiens}	Back alignment and structure

>1h6h_A Neutrophil cytosol factor 4; PX domain; HET: PIB; 1.7A {Homo sapiens} SCOP: d.189.1.1	Back alignment and structure

>1kq6_A NCF-1, P47PHOX, neutrophil cytosol factor 1; alpha beta, PX domain, NADPH oxidase, protein binding; HET: MSE; 1.18A {Homo sapiens} SCOP: d.189.1.1 PDB: 1gd5_A 1o7k_A	Back alignment and structure

>1xte_A Serine/threonine-protein kinase SGK3; CISK, PX domain, transferase; 1.60A {Mus musculus} SCOP: d.189.1.1 PDB: 1xtn_A	Back alignment and structure

>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A*	Back alignment and structure

>2v6v_A BUD emergence protein 1; homotypic fusion, regulator, PI3P, 3-kinase, PX domain, SH3 domain, cytoskeleton, cell polarity; 1.5A {Saccharomyces cerevisiae} PDB: 2czo_A	Back alignment and structure

>3lui_A Sorting nexin-17, SNX17; PX domain, endosome, phosphoprotein, P transport, transport; 1.80A {Homo sapiens} PDB: 3fog_A	Back alignment and structure

>2ar5_A Phosphoinositide 3-kinase; PX domain, transferase; 1.80A {Homo sapiens} PDB: 2rea_A 2red_A	Back alignment and structure

>2csk_A Sorting nexin 12; SNX12, PX domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}	Back alignment and structure

>2i4k_A Sorting nexin-1, SNX1; 3-stranded beta sheet, 3 alpha helices, proline rich loop, protein transport; NMR {Homo sapiens}	Back alignment and structure

>2iwl_X Phosphatidylinositol-4-phosphate 3-kinase C2 domain-containing alpha polypeptide; PI3K, PX domain, transferase; 2.6A {Homo sapiens}	Back alignment and structure

>2v14_A Kinesin-like motor protein C20ORF23; plus-END kinesin complex, transport protein, phosphatidylinositol 3-phosphate binding, nucleotide-binding; 2.20A {Homo sapiens}	Back alignment and structure

>1ocs_A Sorting nexin GRD19; sorting protein, PX-domain, yeast protein; HET: CME; 2.03A {Saccharomyces cerevisiae} SCOP: d.189.1.1 PDB: 1ocu_A*	Back alignment and structure

>3iq2_A Sorting nexin-7; SNX7, PHOX, protein signalling, SGC, structur genomics consortium, protein transport, transport; 1.70A {Homo sapiens}	Back alignment and structure

>2l73_A NADPH oxidase organizer 1; cell membrane, PX domain, oxidoreductase regulator; NMR {Homo sapiens}	Back alignment and structure

>1kmd_A VAM7P, vacuolar morphogenesis protein VAM7; PX domain, phosphoinositide binding, endocytosis/exocytosis complex; NMR {Saccharomyces cerevisiae} SCOP: d.189.1.1	Back alignment and structure

>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1	Back alignment and structure

>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1	Back alignment and structure

>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}	Back alignment and structure

>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}	Back alignment and structure

>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A	Back alignment and structure

>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}	Back alignment and structure

>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*	Back alignment and structure

>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}	Back alignment and structure

>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1	Back alignment and structure

>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1	Back alignment and structure

>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1	Back alignment and structure

>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}	Back alignment and structure

>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}	Back alignment and structure

>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}	Back alignment and structure

>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1	Back alignment and structure

>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1	Back alignment and structure

>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1	Back alignment and structure

>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1	Back alignment and structure

>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A	Back alignment and structure

>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*	Back alignment and structure

>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1	Back alignment and structure

>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}	Back alignment and structure

>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1	Back alignment and structure

>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1	Back alignment and structure

>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}	Back alignment and structure

>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A	Back alignment and structure

>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A	Back alignment and structure

>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*	Back alignment and structure

>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A	Back alignment and structure

>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A	Back alignment and structure

>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}	Back alignment and structure

>2wwe_A Phosphoinositide-3-kinase, class 2, gamma polypeptide; phosphoprotein, nucleotide-binding, PIK3C2G, membrane, PX-domain, transferase, ATP-binding; 1.25A {Homo sapiens}	Back alignment and structure

>3dyt_A Sorting nexin-9; 3-helix bundle, BAR domain, PX domain, phosphoprotein, protein transport, SH3 domain, transport, transport protein; 2.08A {Homo sapiens} PDB: 3dyu_A 2raj_A 2rai_A 2rak_A*	Back alignment and structure

>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A	Back alignment and structure

>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A	Back alignment and structure

>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1	Back alignment and structure

>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A	Back alignment and structure

>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}	Back alignment and structure

>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A	Back alignment and structure

>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B	Back alignment and structure

>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1	Back alignment and structure

>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A	Back alignment and structure

>4akv_A Sorting nexin-33; transport protein, organelle biogenesis; 2.65A {Homo sapiens}	Back alignment and structure

>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*	Back alignment and structure

>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A	Back alignment and structure

>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1	Back alignment and structure

>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}	Back alignment and structure

>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}	Back alignment and structure

>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4	Back alignment and structure

>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1	Back alignment and structure

>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*	Back alignment and structure

>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A	Back alignment and structure

>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A	Back alignment and structure

>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}	Back alignment and structure

>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*	Back alignment and structure

>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A	Back alignment and structure

>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*	Back alignment and structure

>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}	Back alignment and structure

>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}	Back alignment and structure

>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*	Back alignment and structure

>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1	Back alignment and structure

>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}	Back alignment and structure

>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}	Back alignment and structure

>3hpc_X SNX5 protein; sprting nexin, PHOX, SNX5-PX, phosphatidylinositol, PI(4,5)P2, cell adhesion, protein transport; 1.47A {Rattus norvegicus} PDB: 3hpb_A	Back alignment and structure

>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}	Back alignment and structure

>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}	Back alignment and structure

>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}	Back alignment and structure

>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*	Back alignment and structure

>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A	Back alignment and structure

>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A	Back alignment and structure

>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}	Back alignment and structure

>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1	Back alignment and structure

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*	Back alignment and structure

>3qph_A TRMB, A global transcription regulator; transcriptional regulator; HET: SUC; 2.99A {Pyrococcus furiosus}	Back alignment and structure

>3qph_A TRMB, A global transcription regulator; transcriptional regulator; HET: SUC; 2.99A {Pyrococcus furiosus}	Back alignment and structure

>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}	Back alignment and structure

>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}	Back alignment and structure

>2f5t_X Archaeal transcriptional regulator TRMB; sugar-binding; HET: MAL; 1.45A {Thermococcus litoralis} SCOP: b.38.5.1 d.136.1.5	Back alignment and structure

>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}	Back alignment and structure

>2c1l_A Restriction endonuclease; BFII, domain fusion, hydrolase; HET: TAR TLA SRT MES; 1.9A {Bacillus firmus}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		1100
d1v0wa1		258	d.136.1.2 (A:6-263) Phospholipase D {Streptomyces	6e-19
d1v0wa1		258	d.136.1.2 (A:6-263) Phospholipase D {Streptomyces	3e-06
d1v0wa2		246	d.136.1.2 (A:264-514) Phospholipase D {Streptomyce	5e-15
d1v0wa2		246	d.136.1.2 (A:264-514) Phospholipase D {Streptomyce	0.002
d1droa_		122	b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila	2e-06
d1eaza_		103	b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId:	6e-05
d1fgya_		127	b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 1	1e-04
d2coca1		99	b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain cont	5e-04
d1v88a_		130	b.55.1.1 (A:) Oxysterol binding protein-related pr	0.001
d1wjma_		123	b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens),	0.001
d1v5ma_		136	b.55.1.1 (A:) SH2 and PH domain-containing adapter	0.003
d1u5ea1		209	b.55.1.1 (A:14-222) Src-associated adaptor protein	0.004
d1faoa_		100	b.55.1.1 (A:) Dual adaptor of phosphotyrosine and	0.004

>d1v0wa1 d.136.1.2 (A:6-263) Phospholipase D {Streptomyces sp. [TaxId: 1931]} Length = 258	Back information, alignment and structure


class: Alpha and beta proteins (a+b)
fold: Phospholipase D/nuclease
superfamily: Phospholipase D/nuclease
family: Phospholipase D
domain: Phospholipase D
species: Streptomyces sp. [TaxId: 1931]

 Score = 85.5 bits (211), Expect = 6e-19
 Identities = 37/232 (15%), Positives = 66/232 (28%), Gaps = 57/232 (24%)

Query: 355 PRGMTDDGSQAQWFVDGKAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFHNHASSRL 414
           P    DD    +  V  K     +  +I +A   + I      P    +          +
Sbjct: 48  PGCWGDDKCADR--VGTKRLLAKMTENIGNATRTVDISTLAPFPNGAFQD--------AI 97

Query: 415 DALLEAKAKQG--VQIYILLYKEVALALKINSVYSKRKLLSIHENVRV---LRYPDHFAS 469
            A L+  A +G  +++ IL+       + +     + +L +          L       S
Sbjct: 98  VAGLKESAAKGNKLKVRILVGAAPVYHMNVIPSKYRDELTAKLGKAAENITLNVASMTTS 157

Query: 470 GVYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTFEHKIGDNPPLIWPGKDYYNPRESEPN 529
                 +H K+++VD Q    GG++     Y    H                        
Sbjct: 158 KTAFSWNHSKILVVDGQSALTGGINSWKDDYLDTTH------------------------ 193

Query: 530 SWEDTMRDELDRGKYPRMPWHDIHCALWGPPCRDVARHFVQRWNYAKRNKAP 581
                             P  D+  AL GP      R+    W +  +NK+ 
Sbjct: 194 ------------------PVSDVDLALTGPAAGSAGRYLDTLWTWTCQNKSN 227

PyMOL of d1v0wa1

>d1v0wa1 d.136.1.2 (A:6-263) Phospholipase D {Streptomyces sp. [TaxId: 1931]} Length = 258	Back information, alignment and structure

>d1v0wa2 d.136.1.2 (A:264-514) Phospholipase D {Streptomyces sp. [TaxId: 1931]} Length = 246	Back information, alignment and structure

>d1v0wa2 d.136.1.2 (A:264-514) Phospholipase D {Streptomyces sp. [TaxId: 1931]} Length = 246	Back information, alignment and structure

>d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 122	Back information, alignment and structure

>d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 103	Back information, alignment and structure

>d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 127	Back information, alignment and structure

>d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]} Length = 99	Back information, alignment and structure

>d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]} Length = 130	Back information, alignment and structure

>d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2 isoform [TaxId: 9606]} Length = 123	Back information, alignment and structure

>d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein APS {Mouse (Mus musculus) [TaxId: 10090]} Length = 136	Back information, alignment and structure

>d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 209	Back information, alignment and structure

>d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]} Length = 100	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		1100
d1v0wa1		258	Phospholipase D {Streptomyces sp. [TaxId: 1931]}	99.9
d1v0wa2		246	Phospholipase D {Streptomyces sp. [TaxId: 1931]}	99.63
d1byra_		152	Nuclease Nuc {Salmonella typhimurium [TaxId: 90371	99.4
d1byra_		152	Nuclease Nuc {Salmonella typhimurium [TaxId: 90371	99.31
d1v0wa1		258	Phospholipase D {Streptomyces sp. [TaxId: 1931]}	99.31
d1v0wa2		246	Phospholipase D {Streptomyces sp. [TaxId: 1931]}	99.28
d1xtea_		116	Serine/threonine-protein kinase Sgk3, Cisk {Mouse	99.07
d1h6ha_		143	p40phox NADPH oxidase {Human (Homo sapiens) [TaxId	98.98
d1kq6a_		140	p47phox NADPH oxidase {Human (Homo sapiens) [TaxId	98.85
d1u5da1		106	Src kinase-associated phosphoprotein SKAP55 (SCAP1	98.54
d1kmda_		117	Vam7p {Baker's yeast (Saccharomyces cerevisiae) [T	98.53
d1eaza_		103	Tapp1 {Human (Homo sapiens) [TaxId: 9606]}	98.51
d2coda1		102	Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 96	98.5
d1ocsa_		132	Sorting nexin grd19 {Baker's yeast (Saccharomyces	98.49
d1faoa_		100	Dual adaptor of phosphotyrosine and 3-phosphoinosi	98.44
d2dyna_		111	Dynamin {Human (Homo sapiens) [TaxId: 9606]}	98.42
d1u5fa1		111	Src-associated adaptor protein Skap2 {Mouse (Mus m	98.39
d1wgqa_		109	FYVE, RhoGEF and PH domain containing protein 6, F	98.32
d1plsa_		113	Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}	98.29
d2coca1		99	FYVE, RhoGEF and PH domain containing protein 3, F	98.29
d2fjla1		101	Phosphoinositide phospholipase C, PLC-gamma-1 {Rat	98.29
d2coaa1		112	Protein kinase c, d2 type {Human (Homo sapiens) [T	98.28
d1x1fa1		136	Signal-transducing adaptor protein 1, STAP-1 {Huma	98.24
d1v89a_		118	Rho-GTPase-activating protein 25 (KIAA0053) {Human	98.23
d1upqa_		107	Phosphoinositol 3-phosphate binding protein-1, PEP	98.19
d2elba2		101	DCC-interacting protein 13-alpha, APPL1 {Human (Ho	98.19
d1btka_		169	Bruton's tyrosine kinase {Human (Homo sapiens) [Ta	98.12
d1v88a_		130	Oxysterol binding protein-related protein 8 (ORP-8	98.1
d1droa_		122	beta-spectrin {Fruit fly (Drosophila melanogaster)	98.1
d2j59m1		133	Rho GTPase-activating protein 21 {Human (Homo sapi	98.08
d1v5pa_		126	Tapp2 {Mouse (Mus musculus) [TaxId: 10090]}	98.06
d1w1ha_		147	3-phosphoinositide dependent protein kinase-1 {Hum	98.04
d1v5ua_		117	SET binding factor 1, Sbf1 {Mouse (Mus musculus) [	97.99
d1u5ea1		209	Src-associated adaptor protein Skap2 {Mouse (Mus m	97.98
d1wi1a_		126	Calcium-dependent activator protein for secretion,	97.92
d2cofa1		95	KIAA1914 {Human (Homo sapiens) [TaxId: 9606]}	97.92
d2i5fa1		104	Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}	97.92
d1qqga1		103	Insulin receptor substrate 1, IRS-1 {Human (Homo s	97.83
d1fgya_		127	Grp1 {Mouse (Mus musculus) [TaxId: 10090]}	97.83
d1omwa2		119	G-protein coupled receptor kinase 2 (beta-adrenerg	97.82
d1v5ma_		136	SH2 and PH domain-containing adapter protein APS {	97.77
d1unqa_		118	Rac-alpha serine/threonine kinase {Human (Homo sap	97.72
d1wg7a_		150	Dedicator of cytokinesis protein 9, DOCK9 {Human (	97.68
d1x1ga1		116	Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]}	97.64
d1btna_		106	beta-spectrin {Mouse (Mus musculus), brain [TaxId:	97.57
d1wjma_		123	beta-spectrin {Human (Homo sapiens), brain 2 isofo	97.43
d1v61a_		132	Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [	95.79
d1xdpa4		187	Polyphosphate kinase, PPK {Escherichia coli [TaxId	95.16
d2o8ra3		188	Polyphosphate kinase, PPK {Porphyromonas gingivali	93.08
d2o8ra3		188	Polyphosphate kinase, PPK {Porphyromonas gingivali	92.55
d2o8ra4		186	Polyphosphate kinase, PPK {Porphyromonas gingivali	91.86
d1xdpa3		187	Polyphosphate kinase, PPK {Escherichia coli [TaxId	91.15
d1xdpa3		187	Polyphosphate kinase, PPK {Escherichia coli [TaxId	90.65
d1xdpa4		187	Polyphosphate kinase, PPK {Escherichia coli [TaxId	89.69
d2o8ra4		186	Polyphosphate kinase, PPK {Porphyromonas gingivali	86.13
d2dfka2		162	Rho guanine nucleotide exchange factor 9, Collybis	84.12
d1maia_		119	Phospholipase C delta-1 {Rat (Rattus norvegicus) [	82.08

>d1v0wa1 d.136.1.2 (A:6-263) Phospholipase D {Streptomyces sp. [TaxId: 1931]}	Back information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Phospholipase D/nuclease
superfamily: Phospholipase D/nuclease
family: Phospholipase D
domain: Phospholipase D
species: Streptomyces sp. [TaxId: 1931]

Probab=99.90  E-value=2.6e-24  Score=232.87  Aligned_cols=167  Identities=22%  Similarity=0.279  Sum_probs=120.6

Q ss_pred             CCCeEEEEecHHHHHHHHHHHHHhcccEEEEeeecCCceeEEEcCCCCchhHHHHHHHHHHhhCC--cEEEEEEechhhh
Q 001322          361 DGSQAQWFVDGKAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFHNHASSRLDALLEAKAKQG--VQIYILLYKEVAL  438 (1100)
Q Consensus       361 ~gn~v~~lvdG~~~f~al~~aI~~Ak~sI~I~~WwlsPe~yL~rp~~~~~~~rL~~lL~~aA~rG--VkVrILl~d~~~~  438 (1100)
                      +++.+....+++++|++|.++|++||++|+|.       +|++-| ++..+.+|.++|++||+||  |+||||+ |..++
T Consensus        52 g~~~~~~~~~~~~~~~~~~~~I~~A~~~I~i~-------~~~~~p-d~~~~~~i~~aL~~aA~rG~~V~VriL~-d~~gs  122 (258)
T d1v0wa1          52 GDDKCADRVGTKRLLAKMTENIGNATRTVDIS-------TLAPFP-NGAFQDAIVAGLKESAAKGNKLKVRILV-GAAPV  122 (258)
T ss_dssp             TCTTCCCCHHHHHHHHHHHHHHHTCSSEEEEE-------EESSCC-CHHHHHHHHHHHHHHHHTTCCEEEEEEE-ECCC-
T ss_pred             CCCccccCCChHHHHHHHHHHHHHhccEEEEE-------EEEEcC-CchHHHHHHHHHHHHHhCCCCeEEEEEe-CCccc
Confidence            34556666789999999999999999999995       444322 2446789999999999999  9999986 44433


Q ss_pred             Hh--hcchhhhHHHhh----ccCCCeEEEEcCCCcccCcccccCcceEEEEeCcEEEEccccCCCCCcCCCCCCCCCCCC
Q 001322          439 AL--KINSVYSKRKLL----SIHENVRVLRYPDHFASGVYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTFEHKIGDNPP  512 (1100)
Q Consensus       439 ~l--~~~s~~~k~~L~----~l~~nI~V~r~p~~~~~~~~~~~hHqKivVID~~vAfvGGiNL~~GRwDt~~H~l~D~~~  512 (1100)
                      ..  ...+.+. +.|.    .....+.+..+... .....+.+||+|++||||++|||||+||+.++|++.         
T Consensus       123 ~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~rnH~Ki~VVDg~~a~vGG~Ni~~~~~~~~---------  191 (258)
T d1v0wa1         123 YHMNVIPSKYR-DELTAKLGKAAENITLNVASMT-TSKTAFSWNHSKILVVDGQSALTGGINSWKDDYLDT---------  191 (258)
T ss_dssp             -CCCCHHHHHH-HHHHHHHGGGGGGEEEEEEEEC-SBTTTTBCBCCCEEEETTTEEEEESCCCCHHHHTSS---------
T ss_pred             cccccchHHHH-HHHHHhccceeecccccccccc-ccccccccccceEEEEcCCEEEECCcccCcccccCC---------
Confidence            21  1112232 2222    22344444333211 122346789999999999999999999975555321         


Q ss_pred             CCCCCCCCCCCCCCCCCCccccccccccCCCCCCCCeEEEEEEEEChHHHHHHHHHHHHHHhhhcCCC
Q 001322          513 LIWPGKDYYNPRESEPNSWEDTMRDELDRGKYPRMPWHDIHCALWGPPCRDVARHFVQRWNYAKRNKA  580 (1100)
Q Consensus       513 ~~~pG~dY~n~r~~d~~~~~~~~~~~ldr~~~~r~pWhDv~~~v~Gpaa~dl~~~F~qrWn~~~~~k~  580 (1100)
                                                       ..||||++++|+||+|.+++++|.++|+++++++.
T Consensus       192 ---------------------------------~~~w~D~~~~v~Gp~v~~~~~~F~~~W~~~~~e~~  226 (258)
T d1v0wa1         192 ---------------------------------THPVSDVDLALTGPAAGSAGRYLDTLWTWTCQNKS  226 (258)
T ss_dssp             ---------------------------------SSCCBEEEEEEESHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             ---------------------------------CCCeeeeEEEEECHHHHHHHHHHHHHHHHHhCCCC
Confidence                                             13799999999999999999999999999998874

PyMOL of d1v0wa1

>d1v0wa2 d.136.1.2 (A:264-514) Phospholipase D {Streptomyces sp. [TaxId: 1931]}	Back information, alignment and structure

>d1byra_ d.136.1.1 (A:) Nuclease Nuc {Salmonella typhimurium [TaxId: 90371]}	Back information, alignment and structure

>d1byra_ d.136.1.1 (A:) Nuclease Nuc {Salmonella typhimurium [TaxId: 90371]}	Back information, alignment and structure

>d1v0wa1 d.136.1.2 (A:6-263) Phospholipase D {Streptomyces sp. [TaxId: 1931]}	Back information, alignment and structure

>d1v0wa2 d.136.1.2 (A:264-514) Phospholipase D {Streptomyces sp. [TaxId: 1931]}	Back information, alignment and structure

>d1xtea_ d.189.1.1 (A:) Serine/threonine-protein kinase Sgk3, Cisk {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1h6ha_ d.189.1.1 (A:) p40phox NADPH oxidase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1kq6a_ d.189.1.1 (A:) p47phox NADPH oxidase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1kmda_ d.189.1.1 (A:) Vam7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1ocsa_ d.189.1.1 (A:) Sorting nexin grd19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]}	Back information, alignment and structure

>d2coaa1 b.55.1.1 (A:8-119) Protein kinase c, d2 type {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1x1fa1 b.55.1.1 (A:8-143) Signal-transducing adaptor protein 1, STAP-1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}	Back information, alignment and structure

>d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1w1ha_ b.55.1.1 (A:) 3-phosphoinositide dependent protein kinase-1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1) {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein APS {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain [TaxId: 10090]}	Back information, alignment and structure

>d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2 isoform [TaxId: 9606]}	Back information, alignment and structure

>d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1xdpa4 d.136.1.4 (A:502-688) Polyphosphate kinase, PPK {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d2o8ra3 d.136.1.4 (A:318-505) Polyphosphate kinase, PPK {Porphyromonas gingivalis [TaxId: 837]}	Back information, alignment and structure

>d2o8ra3 d.136.1.4 (A:318-505) Polyphosphate kinase, PPK {Porphyromonas gingivalis [TaxId: 837]}	Back information, alignment and structure

>d2o8ra4 d.136.1.4 (A:506-691) Polyphosphate kinase, PPK {Porphyromonas gingivalis [TaxId: 837]}	Back information, alignment and structure

>d1xdpa3 d.136.1.4 (A:315-501) Polyphosphate kinase, PPK {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1xdpa3 d.136.1.4 (A:315-501) Polyphosphate kinase, PPK {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1xdpa4 d.136.1.4 (A:502-688) Polyphosphate kinase, PPK {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d2o8ra4 d.136.1.4 (A:506-691) Polyphosphate kinase, PPK {Porphyromonas gingivalis [TaxId: 837]}	Back information, alignment and structure

>d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]}	Back information, alignment and structure

>d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]}	Back information, alignment and structure