Citrus Sinensis ID: 001346

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090-----
MMLSASPSMVARSSLEEMLESLRRRDECERPKDLPPALPARPTSRARLPSARKSLPTDFKVGEENGVKASMESAEKRSSLNGKEDGKRKEKEWGAKRNNSFGSKKLRKEQTVVDLPYDGGVMLDEEKVNEVLEVNEMKSAKSGEVEWEDNLGYFIKKKLRVWCRLEDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDSPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQLFASKMLKPSPKPAASSQPGALDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRLQKCFRGYQARSRFRELCNGVITLQSFARGENTRRRHASLGKSCSAVVPEIRDEQLREIICLQSAIRGWLVRKQLKMHKLKQSNPVNAKVKRRSGRKSSDMKDVPQEQVQALPTALAELQRRVLKAEATLGQKEEENAALREQLQQYDAKWLEYEAKMKSMEEMWQKQMASLQVSFTCFYTDIIMESLLGICKGTILNMCTIFTMHA
cccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccEEEEEcccccEEEEEEEEEEccEEEEEEccccEEEEEcccccccccccccHHHHHHHcccccHHHHHHHHHHHHcccccccccccEEEEEccccccccccHHHHHHHcccccccccHHHHHHHHHHHHHHcccccEEEEEccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHcHHHHHHcccccccccccccccccEEEEcccccccccccccHHHcccccccccccccccHHHHHHHHccccHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccEEEEEEcccccccccccHHHHHHHHHccccHHHHHHHHHccEEEEcccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEccccccccccHHHHHHHHccHHHHHHHHHHHHHHHHccccccccccEEEcccccHHHHHHHHcccccccccHHHcccccccccHHHHHHHHHHHccccccccccccccEEEEEccEEEcccccHHccccccccHHHHHHHHHccHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEEccccccccccccHHHHHHHHHcccHHHHHHHccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccc
cccccccccHHHHHHHHHHHHHHHccHHccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccEEEEEcccccEEEEEEEEEcccEEEEEEccccEEEEcccccccccccccccHHHHHHHHHHccHHHHHHHHHHHHHccEEEccccEEEEEccccccccccHHHHHHHcccccccccHHHHHHHHHHHHHHcccccEEEEEccccccccHHHHHHHHHHHHHHcccccHHHHHHHHcHHHHHHccccEccccccccccEEEEEEEccccEEEcccEHHHHHHHccEEEEccccccHHHHHHHHccccHHHHHHHccccccHccEEccccEEEEcccccHHHHHHHHHHHHHEcccHHHHHHHHHHHHHHHHHccEEEEEccccccccccccHHHHHHHHHHcccHHHHHHHHcccEEEEcccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEcccHEcccccHHHHHHHHHHHHHHHHHHHHHHHEHHHHHHHccccEEEEEEcccHHHHHHHHcccccHHHHHHHHHccccccHHHHHHHHHHHHcccccccccccccEEEEEEccEEEEEcHHHHHHccccccHHHHHHHHHcccHHHHHHcccccHcccccccccccccccccccHHHHHHHHHHHHHHHHHccccccEEEEEcccccccccccccHHHHHHHcccccEEEEEEccccccccHHHHHHHHHHHHccHHHcccccHHHHHHHHHHHccccccccEEcccEEEEHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEHHHHHHccc
mmlsaspsmvARSSLEEMLESLRRrdecerpkdlppalparptsrarlpsarkslptdfkvgeengvkaSMESAEkrsslngkedgkrkekewgakrnnsfgskklrkeqtvvdlpydggvmldeekVNEVLEVnemksaksgevEWEDNLGYFIKKKLRVWCRledgkwesgmiqstsgDEAFVLLSNGnvvkvstgellpanpdileGVDDLIQlsylnepsvlnniqyrysrdmiyskagpvliavnpfkavpiygnKFITAYRQkvmdsphvyaIADTAYnemmgdgvnQSIIIsgesgagktETAKFAMQYLAAlgggsegieYEILQTNHILEAfgnaktsrndnssrFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNlkvandynylnqsecltidgvddaQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNIsfqvidnenhvEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEvgkqctgrsinildiygfesfkknSFEQFCINYANERLQQHFNRHLFKLEQEeyeldgvdwtrvefedNEECLNliekkplgvlslldeesnfpkatdLTFANKLKqhlgsnscfkgergrAFSIRhyagevpydtngfleknrdplQTDIIQLLSSCTCQVLQLFAskmlkpspkpaassqpgaldtqkqsvgtkfKGQLFKLMHQLEntrphfircikpnskqlpgiyeeDLVLQQFRCCGVLEIVRIsrsgyptrmrhqefaGRYGVLLsekqlsqdplSISVAVLQQFnvlpemyqvgYTKLYLRSGQLAALEDRRKQVLQAIIRLQKCFRGYQARSRFRELCNGvitlqsfargenTRRRHASlgkscsavvpeIRDEQLREIICLQSAIRGWLVRKQLKMHklkqsnpvnakvkrrsgrkssdmkdvpqEQVQALPTALAELQRRVLKAEATLGQKEEENAALREQLQQYDAKWLEYEAKMKSMEEMWQKQMASLQVSFTCFYTDIIMESLLGICKGTILNMCTIFTMHA
mmlsaspsmvarsSLEEMLESLRrrdecerpkdlppalparptsrarlpsarkslptdfkvgeengvkasmesaekrsslngkedgkrkekewgakrnnsfgskklrkeqtvvdlpydggvmldeEKVNEVLEvnemksaksgevewednLGYFIKKKLRVWCRLEDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDSPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLevgkqctgrSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQhlgsnscfkgeRGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQLFASKMLKPSPKPAASSQPGALDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRisrsgyptrMRHQEFAGRYGVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRLQKCFRGYQARSRFRELCNGVITlqsfargentrrrhaslgkscsavvPEIRDEQLREIICLQSAIRGWLVRKQLKmhklkqsnpvnakvkrrsgrkssdmkdvpqeqVQALPTALAELQRRVLKAEATLGQKEEENAALREQLQQYDAKWLEYEAKMKSMEEMWQKQMASLQVSFTCFYTDIIMESLLGICKGTILNMCTIFTMHA
MMLSASPSMVARSSLEEMLESLRRRDECERPKDLPPALPARPTSRARLPSARKSLPTDFKVGEENGVKASMESAEKRSSLNGKEDGKRKEKEWGAKRNNSFGSKKLRKEQTVVDLPYDGGVMLDeekvnevlevneMKSAKSGEVEWEDNLGYFIKKKLRVWCRLEDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDSPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQLFaskmlkpspkpaassqpgaLDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRLQKCFRGYQARSRFRELCNGVITLQSFARGENTRRRHASLGKSCSAVVPEIRDEQLREIICLQSAIRGWLVRKQLKMHKLKQSNPVNAKVKRRSGRKSSDMKDVPQEQVQALPTALAELQRRVLKAEATLGQKEEENAALREQLQQYDAKWLEYEAKMKSMEEMWQKQMASLQVSFTCFYTDIIMESLLGICKGTILNMCTIFTMHA
***************************************************************************************************************VVDLPYDGGVMLDEEKVNEVLE**********EVEWEDNLGYFIKKKLRVWCRLEDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDSPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTNHILEAFGNA*********RFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQLFAS****************************FKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRLQKCFRGYQARSRFRELCNGVITLQSFARGE********LGKSCSAVVPEIRDEQLREIICLQSAIRGWLVRKQLK*********************************************************************QYDAKWLEYEAKMKSMEEMWQKQMASLQVSFTCFYTDIIMESLLGICKGTILNMCTIFT***
********************************************************************************************************************************************************YFIKKKLRVWCRLEDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDSPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISF***************AVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQLFA*****************************FKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQL*QDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRLQKCFRGYQARSRFRELCNGVITLQSFARGENTRRRHASLGKSCSAVVPEIRDEQLREIICLQSAIRGWLVRKQLKMHKLKQSNPVNAKVKRRSGRKSSDM*DVPQE*VQALPTA*AE********************************************************************************MCTIFT***
************SSLEEMLESLRRRDECERPKDLPPALPARPTSRARLPSARKSLPTDFKVGEENGV**************************GAKRNNSFGSKKLRKEQTVVDLPYDGGVMLDEEKVNEVLEVNEMKSAKSGEVEWEDNLGYFIKKKLRVWCRLEDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDSPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQLFASKML********************SVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRLQKCFRGYQARSRFRELCNGVITLQSFARG*************CSAVVPEIRDEQLREIICLQSAIRGWLVRKQLK*******************************QVQALPTALAELQRRVLKAEATLGQKEEENAALREQLQQYDAKWLEYEAKMKSMEEMWQKQMASLQVSFTCFYTDIIMESLLGICKGTILNMCTIFTMHA
************************R*********PPALP*************KSLPTDFKVGEENGVKASMESA********************A****SF***********************************MKSAKSGEVEWEDNLGYFIKKKLRVWCRLEDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDSPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQLFASKM********************QSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRLQKCFRGYQARSRFRELCNGVITLQSFARGENTRRRHASLGKSCSAVVPEIRDEQLREIICLQSAIRGWLVRKQLKMHKLKQSNPVNAKVKRRSGRKSSDMKDVPQEQVQALPTALAELQRRVLKAEATLGQKEEENAALREQLQQYDAKWLEYEAKMKSMEEMWQKQMASLQVSFTCFYTDIIMESLLGICKGTILNMCTIFTMHA
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MMLSASPSMVARSSLEEMLESLRRRDECERPKDLPPALPARPTSRARLPSARKSLPTDFKVGEENGVKASMESAEKRSSLNGKEDGKRKEKEWGAKRNNSFGSKKLRKEQTVVDLPYDGGVMLDEEKVNEVLEVNEMKSAKSGEVEWEDNLGYFIKKKLRVWCRLEDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDSPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQLFASKMLKPSPKPAASSQPGALDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRLQKCFRGYQARSRFRELCNGVITLQSFARGENTRRRHASLGKSCSAVVPEIRDEQLREIICLQSAIRGWLVRKQLKMHKLKQSNPVNAKVKRRSGRKSSDMKDVPQEQVQALPTAxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxMKSMEEMWQKQMASLQVSFTCFYTDIIMESLLGICKGTILNMCTIFTMHA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1095 2.2.26 [Sep-21-2011]
P54697 2245 Myosin-J heavy chain OS=D yes no 0.787 0.383 0.391 0.0
Q02440 1829 Unconventional myosin-Va yes no 0.734 0.439 0.417 1e-174
P08799 2116 Myosin-2 heavy chain OS=D no no 0.656 0.339 0.440 1e-173
Q9Y4I1 1855 Unconventional myosin-Va yes no 0.732 0.432 0.417 1e-172
Q99104 1853 Unconventional myosin-Va yes no 0.729 0.431 0.417 1e-172
Q9QYF3 1828 Unconventional myosin-Va yes no 0.732 0.438 0.417 1e-170
P70569 1846 Unconventional myosin-Vb no no 0.789 0.468 0.381 1e-170
P21271 1818 Unconventional myosin-Vb no no 0.731 0.440 0.404 1e-169
P05659 1509 Myosin-2 heavy chain, non N/A no 0.786 0.570 0.385 1e-167
Q9ULV0 1848 Unconventional myosin-Vb no no 0.710 0.420 0.404 1e-167
>sp|P54697|MYOJ_DICDI Myosin-J heavy chain OS=Dictyostelium discoideum GN=myoJ PE=4 SV=2 Back     alignment and function desciption
 Score =  654 bits (1686), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/960 (39%), Positives = 578/960 (60%), Gaps = 98/960 (10%)

Query: 178  TSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDM 237
            TS D+  V   +   VK+   ++   NPDILEGVDDL  LS+L+EP++L+N+ +RY+ + 
Sbjct: 50   TSADQVLVRTEDDREVKIPLSKVFQKNPDILEGVDDLSFLSHLHEPAILHNLHHRYNLNQ 109

Query: 238  IYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDS--PHVYAIADTAYNEMMGDGVNQS 295
            IY+  G +LIA+NP+ ++P+YG + I+AY  K + +  PHVYA+A+ A+ +M  DG +QS
Sbjct: 110  IYTYIGKILIAINPYTSLPLYGKEMISAYYGKQLGTLAPHVYAVAEDAFKDMRYDGTSQS 169

Query: 296  IIISGESGAGKTETAKFAMQYLAALGG----------------GSEGI------------ 327
            I++SGESGAGKTET KF +QY AA+G                  S+GI            
Sbjct: 170  ILVSGESGAGKTETTKFLLQYFAAMGNMIKESTSSSSINGINTSSDGIPVTPPPSPMKKS 229

Query: 328  ------EYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEK 381
                  E  +L++  +LEAFGNAKT RNDNSSRFGK IEIHF+  G I GAKI T+LLEK
Sbjct: 230  PVDKSVEERVLESTPLLEAFGNAKTLRNDNSSRFGKFIEIHFNEMGSIIGAKILTYLLEK 289

Query: 382  SRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFH 441
            SR+V+    ER+YHIFYQL +GA   LKE+LNLK   +Y+YLN+S C  I+GV D ++F+
Sbjct: 290  SRIVRQVYNERNYHIFYQLLSGASEELKEKLNLKTIEEYSYLNKSGCFEIEGVSDEEHFN 349

Query: 442  NLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVI--DNENHVEVIADEAVTTAAMLM 499
                A+ +  I   ++E  F +L+A+L +GN  F+ I   N++  ++I  + +   ++L+
Sbjct: 350  KTCHAMQVAGITLVEQENVFRILSAILLIGNFEFENIAGSNDDSCQLIDRDPLEKVSVLL 409

Query: 500  GCSS-DELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSL 558
            GC+  DEL+ ++ T K+  GK+S     T ++A ++RD+L+ F+YG +FDW+V +IN S+
Sbjct: 410  GCAQPDELLNSMLTRKVVTGKESYISHNTKERAENARDSLSMFLYGMMFDWLVVKINSSM 469

Query: 559  EVGKQCTGRS-INILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDG 617
             +  Q   +S I +LDIYGFESF+ N FEQFCINYANE+LQQ FN+H+FK EQ+EY  + 
Sbjct: 470  SISTQQKSKSFIGVLDIYGFESFEVNGFEQFCINYANEKLQQLFNQHVFKEEQQEYIKEK 529

Query: 618  VDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGE 677
            +DW+ ++F DN++ L+LIEKKP+ +L+LLDEE+ FPKAT  T A KL   + S+S F+  
Sbjct: 530  IDWSYIDFNDNQDTLDLIEKKPICILTLLDEETMFPKATPQTLATKLYSKMTSHSKFEKP 589

Query: 678  R--GRAFSIRHYAGEVPYDTNGFLEKNRD---PLQTDIIQLLSSCTCQVLQLFASKMLK- 731
            R    AF+I HYAG+V Y+T+ FL+KN+D   P Q  I+Q  +    +VL   + K  + 
Sbjct: 590  RFSSTAFTINHYAGKVTYETDQFLDKNKDFIIPEQISILQRSNFSFIKVLMSHSDKFTQS 649

Query: 732  PSPKPAASSQPGALDTQKQ---------SVGTKFKGQLFKLMHQLENTRPHFIRCIKPNS 782
            P   P  +  P + +T+           SVG++F   L  LM  +  T PH++RCIKPN 
Sbjct: 650  PGGHPQGNGGPTSSNTKGTSGSSSMKFLSVGSQFSTSLATLMKTISTTTPHYVRCIKPNP 709

Query: 783  KQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLL----------- 831
            ++LP  + +  V+ Q RC GV+E VRI  +G+PTR    EF  RY +L            
Sbjct: 710  EKLPQTFNKQDVIHQLRCGGVMESVRICCAGFPTRRLLSEFYQRYKILYVKDINTGSGGG 769

Query: 832  ---SEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRR-KQVLQAII 887
               S     +DP  +   +L    +  + Y++G TK++LR+GQLA+LED R +Q+ ++  
Sbjct: 770  KKGSNNNKIKDPKILVQNLLTGIELSDDKYKIGLTKVFLRAGQLASLEDMRLEQLDRSAT 829

Query: 888  RLQKCFRGYQARSRFRELCNGVITLQSFARGENTRRRHASLGKSCSAVV----------- 936
             +QK ++GY  R R+++L +  + +Q+  R  + +++ ++L ++ SA++           
Sbjct: 830  VIQKRWKGYLYRKRYKQLRDASLIIQTKLRSVHAKQQLSALQRTHSAILIQKVWRAHRDR 889

Query: 937  ---PEIRDEQLREIICLQSAIRGWLVRKQLKMHKLKQSNPV-NAKVKRRSGRKSSDMKDV 992
                +IRD  L+    LQ+ +R  L  +Q+   + + +  +   K+++   ++  D K  
Sbjct: 890  VQYQKIRDASLQ----LQTVMRRHLFSEQVHRERCENAAIILQTKIRQILSKREVDKKLR 945

Query: 993  PQEQVQALPTALAELQRRV---LKAEA-TLGQKEEENAALREQLQQYDAKW-LEYEAKMK 1047
                +QA      +L +RV   L+AEA +L   +E+   L+E+L+  + +W L  EAK K
Sbjct: 946  GIILIQA--RWRMKLAKRVYIQLRAEARSLRTVQEQKNKLQEKLE--ELQWRLTSEAKRK 1001
Processive motor protein that can move over long distances along F-actin without disassociating; processiveness depends on high physiological Mg(2+) concentrations. Presents a high actin affinity in the presence of ADP, fast ATP hydrolysis, and a high steady-state ATPase activity in the presence of actin that is rate limited by ADP release. Physiological decrease of free Mg(2+) ions leads to an increased rate of ADP release and shortening of the fraction of time it spends in the strong acting binding states.
Dictyostelium discoideum (taxid: 44689)
>sp|Q02440|MYO5A_CHICK Unconventional myosin-Va OS=Gallus gallus GN=MYO5A PE=1 SV=1 Back     alignment and function description
>sp|P08799|MYS2_DICDI Myosin-2 heavy chain OS=Dictyostelium discoideum GN=mhcA PE=1 SV=3 Back     alignment and function description
>sp|Q9Y4I1|MYO5A_HUMAN Unconventional myosin-Va OS=Homo sapiens GN=MYO5A PE=1 SV=2 Back     alignment and function description
>sp|Q99104|MYO5A_MOUSE Unconventional myosin-Va OS=Mus musculus GN=Myo5a PE=1 SV=2 Back     alignment and function description
>sp|Q9QYF3|MYO5A_RAT Unconventional myosin-Va OS=Rattus norvegicus GN=Myo5a PE=1 SV=1 Back     alignment and function description
>sp|P70569|MYO5B_RAT Unconventional myosin-Vb OS=Rattus norvegicus GN=Myo5b PE=1 SV=1 Back     alignment and function description
>sp|P21271|MYO5B_MOUSE Unconventional myosin-Vb OS=Mus musculus GN=Myo5b PE=2 SV=2 Back     alignment and function description
>sp|P05659|MYSN_ACACA Myosin-2 heavy chain, non muscle OS=Acanthamoeba castellanii PE=3 SV=1 Back     alignment and function description
>sp|Q9ULV0|MYO5B_HUMAN Unconventional myosin-Vb OS=Homo sapiens GN=MYO5B PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1095
255569583 1223 myosin vIII, putative [Ricinus communis] 0.968 0.867 0.708 0.0
356546900 1196 PREDICTED: myosin-J heavy chain-like [Gl 0.952 0.872 0.688 0.0
110738812 1220 myosin heavy chain [Arabidopsis thaliana 0.979 0.879 0.677 0.0
145334819 1220 myosin 2 [Arabidopsis thaliana] gi|33200 0.979 0.879 0.677 0.0
356542250 1196 PREDICTED: myosin-J heavy chain-like [Gl 0.939 0.860 0.689 0.0
297796303 1219 predicted protein [Arabidopsis lyrata su 0.978 0.879 0.675 0.0
225461317 1229 PREDICTED: myosin-J heavy chain-like [Vi 0.960 0.855 0.693 0.0
302143081 1197 unnamed protein product [Vitis vinifera] 0.946 0.865 0.701 0.0
4990451101 myosin [Arabidopsis thaliana] 0.852 0.847 0.704 0.0
357452423 1292 Myosin-like protein [Medicago truncatula 0.954 0.808 0.617 0.0
>gi|255569583|ref|XP_002525757.1| myosin vIII, putative [Ricinus communis] gi|223534907|gb|EEF36593.1| myosin vIII, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1530 bits (3960), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 773/1091 (70%), Positives = 883/1091 (80%), Gaps = 30/1091 (2%)

Query: 1    MMLSASP-SMVARSSLEEMLESLRRRDEC-ERPKDLPPALPARPTSRARLPSARKSLPTD 58
            MMLS SP S V RSSLEEML+S+RRRDE  E+ KDLPPALPARPTSRARLPSARKSLPTD
Sbjct: 1    MMLSESPASTVTRSSLEEMLDSIRRRDEAMEKSKDLPPALPARPTSRARLPSARKSLPTD 60

Query: 59   FKVGEENGVKASMESA---EKRSSLNGKEDGKRKEKEWGAKRNNSFGSKKLRKEQTVVDL 115
            FKVG    +++ +E+    +KR     K+D KRKEKE G K   SFGSKK+RK+Q  VD 
Sbjct: 61   FKVGANGQLESKVETVVEVDKR-----KDDTKRKEKELGHK-TGSFGSKKMRKDQNCVDS 114

Query: 116  -PYDGGVMLDEEKVNEVLEVNEMKS-AKSGEVEWEDNLGYFIKKKLRVWCRLEDGKWESG 173
             PY        E+ NE +    + S +K+ E +W+DN+GYFIKKKLR+WC+L +G+W SG
Sbjct: 115  NPY-------AEEKNEAVRGPVIASMSKAEEPDWDDNIGYFIKKKLRIWCQLANGQWGSG 167

Query: 174  MIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRY 233
             IQSTSGDEA V LS GN VKVST +LLPANPDILEGVDDLI+LSYLNEPSVL N+++RY
Sbjct: 168  KIQSTSGDEAVVSLSAGNFVKVSTADLLPANPDILEGVDDLIKLSYLNEPSVLYNLKHRY 227

Query: 234  SRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDSPHVYAIADTAYNEMMGDGVN 293
            S+DMIYSKAGPVLIA NPFK VP+YGN+ I AY+QK++DSPHVYAIADTAYNEMM DG N
Sbjct: 228  SQDMIYSKAGPVLIAFNPFKVVPLYGNEIIGAYKQKLVDSPHVYAIADTAYNEMMRDGKN 287

Query: 294  QSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTNHILEAFGNAKTSRNDNSS 353
            QS+IISGESGAGKTETAK+AMQYLAALGGGS GIE EILQTN +LEAFGNAKT RN NSS
Sbjct: 288  QSLIISGESGAGKTETAKYAMQYLAALGGGSGGIETEILQTNCVLEAFGNAKTYRNGNSS 347

Query: 354  RFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLN 413
            RFGKLIEIHFS+ GKICGAKIQTFLLEKSRVVQLA GERSYHIFYQLCAGAPS L+ERLN
Sbjct: 348  RFGKLIEIHFSSLGKICGAKIQTFLLEKSRVVQLANGERSYHIFYQLCAGAPSILRERLN 407

Query: 414  LKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNI 473
            LK+A++YNYLNQSE L IDGVDDA  F  LMEAL+IV I K D+EQ F+MLAA+LWLGNI
Sbjct: 408  LKMASEYNYLNQSEGLVIDGVDDALKFEKLMEALEIVQISKADQEQAFSMLAAILWLGNI 467

Query: 474  SFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAID 533
            SFQVIDNENHVEV+ADEA+T AA LMGCS  ELMLALSTH+I+ GKD I KKLT +QAID
Sbjct: 468  SFQVIDNENHVEVLADEALTNAARLMGCSFHELMLALSTHRIRFGKDDIVKKLTFRQAID 527

Query: 534  SRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYA 593
             RDALAKFIY SLFDW+VEQINKSLEVGK  TGRSINILDIYGFESFK NSFEQFCINYA
Sbjct: 528  RRDALAKFIYASLFDWLVEQINKSLEVGKLRTGRSINILDIYGFESFKNNSFEQFCINYA 587

Query: 594  NERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFP 653
            NERLQQHFNRHLFKLEQEEY+ DG+DWT+V+F+DN++CLNL EKKPLG+LSLLDEESNFP
Sbjct: 588  NERLQQHFNRHLFKLEQEEYDEDGIDWTKVDFDDNQDCLNLFEKKPLGLLSLLDEESNFP 647

Query: 654  KATDLTFANKLKQHLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQL 713
             ATDLTFANKLKQHLG N CFK ERGRAF +RHYAGEV YDTNGFLEKNRDPL +D+ QL
Sbjct: 648  NATDLTFANKLKQHLGGNPCFKAERGRAFVVRHYAGEVVYDTNGFLEKNRDPLHSDLFQL 707

Query: 714  LSSCTCQVLQLFASKMLKPSPKPAASS--QPGALDTQKQSVGTKFKGQLFKLMHQLENTR 771
            LSSC+C++ QLF SKM   S +  +SS  Q   L++ KQSVGTKFKGQLFKLMHQLENT 
Sbjct: 708  LSSCSCRLAQLFVSKM---SNQFVSSSFNQSYGLESSKQSVGTKFKGQLFKLMHQLENTT 764

Query: 772  PHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLL 831
            PHFIRC+KPNSKQLPG +E+DLVLQQ RCCGVLE+VRISRSGYPTR+ HQ+FA RYG LL
Sbjct: 765  PHFIRCLKPNSKQLPGEHEDDLVLQQLRCCGVLEVVRISRSGYPTRITHQDFAQRYGFLL 824

Query: 832  SEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRLQK 891
            S   +SQDPLSISVAVLQQFN+LPEMYQVGYTK+YLR+G +A LE+ RKQVLQ I+ +QK
Sbjct: 825  SNTSVSQDPLSISVAVLQQFNILPEMYQVGYTKVYLRTGSIAKLEESRKQVLQGILGVQK 884

Query: 892  CFRGYQARSRFRELCNGVITLQSFARGENTRRRHASLGKSCS---AVVPEIRDEQLREII 948
             FRG Q R    EL  GV  +QSF RGEN RR + S+   C+      P + D++L  +I
Sbjct: 885  YFRGSQVRRDLNELKRGVTIIQSFVRGENARRNYNSIANRCAFRNEGPPTMVDKKLMAVI 944

Query: 949  CLQSAIRGWLVRKQLK-MHKLKQSNPVNAKVKRRSGRKSSDMKDVPQEQVQALPTALAEL 1007
             LQSAIRGWL RKQ     KLK+ +  N   +R+  +K S++K +PQEQV      L EL
Sbjct: 945  FLQSAIRGWLARKQFSDKRKLKELHE-NINSRRKHVKKISEVKVLPQEQVDIQAMILTEL 1003

Query: 1008 QRRVLKAEATLGQKEEENAALREQLQQYDAKWLEYEAKMKSMEEMWQKQMASLQVSFTCF 1067
             RRV KAE  L QKE+ENA+LREQLQQ++ +W EYE KMK+ME+ WQ QM SLQ S    
Sbjct: 1004 HRRVAKAEVALLQKEDENASLREQLQQFERRWSEYETKMKTMEQTWQMQMESLQASLAAA 1063

Query: 1068 YTDIIMESLLG 1078
               +  +S  G
Sbjct: 1064 RKSLAADSTAG 1074

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356546900|ref|XP_003541859.1| PREDICTED: myosin-J heavy chain-like [Glycine max] Back     alignment and taxonomy information
>gi|110738812|dbj|BAF01329.1| myosin heavy chain [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|145334819|ref|NP_001078755.1| myosin 2 [Arabidopsis thaliana] gi|332009096|gb|AED96479.1| myosin 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356542250|ref|XP_003539582.1| PREDICTED: myosin-J heavy chain-like [Glycine max] Back     alignment and taxonomy information
>gi|297796303|ref|XP_002866036.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297311871|gb|EFH42295.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|225461317|ref|XP_002281748.1| PREDICTED: myosin-J heavy chain-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|302143081|emb|CBI20376.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|499045|emb|CAA84065.1| myosin [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|357452423|ref|XP_003596488.1| Myosin-like protein [Medicago truncatula] gi|355485536|gb|AES66739.1| Myosin-like protein [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1095
TAIR|locus:2162550 1220 ATM2 "myosin 2" [Arabidopsis t 0.978 0.878 0.669 0.0
TAIR|locus:2011922 1153 VIIIA [Arabidopsis thaliana (t 0.854 0.811 0.617 3.7e-309
UNIPROTKB|F1LUM1 1818 Myo5b "Unconventional myosin-V 0.614 0.370 0.426 6.3e-177
MGI|MGI:106598 1818 Myo5b "myosin VB" [Mus musculu 0.614 0.370 0.426 1.5e-175
UNIPROTKB|F1M3R4 1844 Myo5b "Unconventional myosin-V 0.614 0.364 0.426 4.6e-174
UNIPROTKB|F1PX71 1823 MYO5B "Uncharacterized protein 0.622 0.374 0.423 4.6e-174
RGD|621347 1846 Myo5b "myosin Vb" [Rattus norv 0.614 0.364 0.426 1.2e-173
UNIPROTKB|P70569 1846 Myo5b "Unconventional myosin-V 0.614 0.364 0.426 1.2e-173
TAIR|locus:2007938 1520 MYA1 "myosin 1" [Arabidopsis t 0.804 0.579 0.404 1.1e-163
TAIR|locus:2199449 1529 XIE [Arabidopsis thaliana (tax 0.805 0.576 0.393 7.4e-163
TAIR|locus:2162550 ATM2 "myosin 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3706 (1309.6 bits), Expect = 0., P = 0.
 Identities = 731/1092 (66%), Positives = 865/1092 (79%)

Query:     1 MMLSASPSMVARSSLEEMLESLRRRDECERPKDLPPALPARPTSRARLPSARKSLPTDFK 60
             MMLSASP+ +A+SSLEEMLESLR++DEC+RPKD+PPALP+RP SRARLPSAR+SLP +F 
Sbjct:     1 MMLSASPNTLAKSSLEEMLESLRQKDECDRPKDMPPALPSRPNSRARLPSARRSLPANFN 60

Query:    61 VG----EENGVKASMESAEKRSSLNGKEDG-KRKEKEWGAKRNNSFGSKK----LRKEQT 111
             V     ++NG   S+  A +  S   KE+G KRKEK+ G KRN SFGSKK    LR E  
Sbjct:    61 VSSVMEDQNGSVVSVTPAVEAES-ERKEEGVKRKEKDLGVKRN-SFGSKKMRTGLRSESP 118

Query:   112 VVDLPYDGGVMLDXXXXXXXXXXXXMKSAKSGEVEWEDNLGYFIKKKLRVWCRLEDGKWE 171
                   + GV +                 +S   EW +N+ YFIKKKLRVWCR+ +G+W+
Sbjct:   119 YAAEKEEEGVKISIAKVSLVENTEEHNKPES---EWNNNVEYFIKKKLRVWCRVSNGQWQ 175

Query:   172 SGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQY 231
              G IQSTS D + V+LS  NVVKVST EL PANPDILEGV+DLIQLSYLNEPSVL N++ 
Sbjct:   176 LGKIQSTSADTSLVMLSTANVVKVSTEELFPANPDILEGVEDLIQLSYLNEPSVLYNLRV 235

Query:   232 RYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDSPHVYAIADTAYNEMMGDG 291
             RY +D+IYSKAGPVLIAVNPFK V IYGN  I+AY++KVMD+PHVYA+AD AY+EMM + 
Sbjct:   236 RYLQDVIYSKAGPVLIAVNPFKNVEIYGNDVISAYQKKVMDAPHVYAVADAAYDEMMREE 295

Query:   292 VNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTNHILEAFGNAKTSRNDN 351
              NQS+IISGESGAGKTETAKFAMQYLAALGGGS G+EYEIL+T  ILEAFGNAKTSRN N
Sbjct:   296 KNQSLIISGESGAGKTETAKFAMQYLAALGGGSCGVEYEILKTTCILEAFGNAKTSRNAN 355

Query:   352 SSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKER 411
             SSRFGKLIEIHFSA GKICGAK++TFLLEKSRVVQL  GERSYHIFY+LCAGA   LKER
Sbjct:   356 SSRFGKLIEIHFSAMGKICGAKLETFLLEKSRVVQLFNGERSYHIFYELCAGASPILKER 415

Query:   412 LNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLG 471
             L LK A++Y YL+QS+CLTI GVDDAQ FH L+EA DIV I KE +E+ FA+LAAVLWLG
Sbjct:   416 LKLKTASEYTYLSQSDCLTIAGVDDAQKFHKLLEAFDIVQIPKEHQERAFALLAAVLWLG 475

Query:   472 NISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQA 531
             N+SF+V DNENHVEV+ADEAV  AAMLMGC+++ELM+ LST K+QAG D IAKKLTL+QA
Sbjct:   476 NVSFRVTDNENHVEVVADEAVANAAMLMGCNTEELMVVLSTRKLQAGTDCIAKKLTLRQA 535

Query:   532 IDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCIN 591
              D RD +AKFIY +LFDW+VEQIN +LEVGK  TGRSI+ILDIYGFESFK NSFEQFCIN
Sbjct:   536 TDMRDGIAKFIYANLFDWLVEQINIALEVGKSRTGRSISILDIYGFESFKNNSFEQFCIN 595

Query:   592 YANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESN 651
             YANERLQQHFNRHLFKLEQEEYE DG+DWT+VEF DN+ECL+LIEKKP+G+LSLLDEESN
Sbjct:   596 YANERLQQHFNRHLFKLEQEEYEEDGIDWTKVEFVDNQECLDLIEKKPIGLLSLLDEESN 655

Query:   652 FPKATDLTFANKLKQHLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDII 711
             FPKATDLTFANKLKQHL +NSCFKGERGRAF + HYAGEV YDTNGFLEKNRDPL  D+I
Sbjct:   656 FPKATDLTFANKLKQHLKTNSCFKGERGRAFRVNHYAGEVLYDTNGFLEKNRDPLPADLI 715

Query:   712 QLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDTQKQSVGTKFKGQLFKLMHQLENTR 771
              LLSSC CQ+L+LF                    D+  Q+VGTKFKGQLFKLM++LENT 
Sbjct:   716 NLLSSCDCQLLKLFSTKMRGKSQKPLMLS-----DSTNQTVGTKFKGQLFKLMNKLENTS 770

Query:   772 PHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLL 831
             PHFIRCIKPNSKQLP +YEEDLVLQQ RCCGVLE+VRISRSGYPTR+ HQEFAGRYG LL
Sbjct:   771 PHFIRCIKPNSKQLPRVYEEDLVLQQLRCCGVLEVVRISRSGYPTRLTHQEFAGRYGFLL 830

Query:   832 SEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRLQK 891
             S+K+++QDPLS+S+AVL+Q++V PEMYQVGYTKLYLR+GQ+   EDRRK+VLQ I+ LQK
Sbjct:   831 SDKKVAQDPLSVSIAVLKQYDVHPEMYQVGYTKLYLRTGQIGIFEDRRKKVLQGIVGLQK 890

Query:   892 CFRGYQARSRFRELCNGVITLQSFARGENTRRRHASLGKSCSAVVPEIRDEQLREIICLQ 951
              FRG+ +R+ F+ +    + LQS+ RGEN RR   +  K  +  V E   ++L  +I LQ
Sbjct:   891 HFRGHLSRAYFQNMRKVTLVLQSYIRGENARRLFDTEAKFHADSVSEASTDELSAVIHLQ 950

Query:   952 SAIRGWLVRKQLK-MHKLKQSNPVNAKVKRRSGRKSSDMKDVPQEQVQALPTALAELQRR 1010
             SA+RGWL RK    M + K+   V  K KR++GR+ S+ KD+P EQ Q  PT++++LQ+R
Sbjct:   951 SAVRGWLARKHFNSMQRQKELRNVATKSKRKAGRRISEDKDIPLEQPQVQPTSMSDLQKR 1010

Query:  1011 VLKAEATLGQKEEENAALREQLQQYDAKWLEYEAKMKSMEEMWQKQMASLQVSFTCFYTD 1070
             +LK+EA L QKEEEN ALREQL+Q++ +W EY+ KMKSMEE WQKQM+SLQ+S       
Sbjct:  1011 ILKSEAALSQKEEENTALREQLRQFEERWSEYDIKMKSMEETWQKQMSSLQMSLAAARKS 1070

Query:  1071 IIMESLLGICKG 1082
             +  ES+ G   G
Sbjct:  1071 LAAESITGQAGG 1082
GO:0003774 "motor activity" evidence=IEA;ISS
GO:0005524 "ATP binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0016459 "myosin complex" evidence=IEA;ISS
GO:0030048 "actin filament-based movement" evidence=TAS
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2011922 VIIIA [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1LUM1 Myo5b "Unconventional myosin-Vb" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:106598 Myo5b "myosin VB" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1M3R4 Myo5b "Unconventional myosin-Vb" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1PX71 MYO5B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|621347 Myo5b "myosin Vb" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P70569 Myo5b "Unconventional myosin-Vb" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
TAIR|locus:2007938 MYA1 "myosin 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2199449 XIE [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1095
cd01383677 cd01383, MYSc_type_VIII, Myosin motor domain, plan 0.0
smart00242677 smart00242, MYSc, Myosin 0.0
cd00124679 cd00124, MYSc, Myosin motor domain 0.0
cd01377693 cd01377, MYSc_type_II, Myosin motor domain, type I 0.0
pfam00063679 pfam00063, Myosin_head, Myosin head (motor domain) 0.0
cd01384674 cd01384, MYSc_type_XI, Myosin motor domain, plant- 0.0
cd01380691 cd01380, MYSc_type_V, Myosin motor domain, type V 0.0
COG5022 1463 COG5022, COG5022, Myosin heavy chain [Cytoskeleton 0.0
cd01378674 cd01378, MYSc_type_I, Myosin motor domain, type I 0.0
cd01381671 cd01381, MYSc_type_VII, Myosin motor domain, type 0.0
cd01387677 cd01387, MYSc_type_XV, Myosin motor domain, type X 0.0
cd01385692 cd01385, MYSc_type_IX, Myosin motor domain, type I 0.0
cd01382717 cd01382, MYSc_type_VI, Myosin motor domain, type V 1e-174
cd01379653 cd01379, MYSc_type_III, Myosin motor domain, type 1e-163
PTZ00014821 PTZ00014, PTZ00014, myosin-A; Provisional 1e-146
cd01386767 cd01386, MYSc_type_XVIII, Myosin motor domain, typ 3e-75
cd01363186 cd01363, Motor_domain, Myosin and Kinesin motor do 5e-14
smart0001523 smart00015, IQ, Calmodulin-binding motif 0.001
>gnl|CDD|238679 cd01383, MYSc_type_VIII, Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata Back     alignment and domain information 
 Score = 1296 bits (3356), Expect = 0.0
 Identities = 540/678 (79%), Positives = 594/678 (87%), Gaps = 1/678 (0%)

Query: 202 PANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNK 261
           PANPDIL+GVDDL+QLSYLNEPSVL N+QYRYS+D+IY+KAGPVL+AVNPFK VP+YGN 
Sbjct: 1   PANPDILDGVDDLMQLSYLNEPSVLYNLQYRYSQDLIYTKAGPVLVAVNPFKEVPLYGND 60

Query: 262 FITAYRQKVMDSPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALG 321
           +I AYR+K  DSPHVYAIADTAYNEMM D VNQSIIISGESGAGKTETAK AMQYLA+LG
Sbjct: 61  YIEAYRKKSNDSPHVYAIADTAYNEMMRDEVNQSIIISGESGAGKTETAKIAMQYLASLG 120

Query: 322 GGSEGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEK 381
           GGS GIEYEILQTN ILEAFGNAKTSRNDNSSRFGKLIEIHFS  GKI GAKIQTFLLEK
Sbjct: 121 GGS-GIEYEILQTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGAKIQTFLLEK 179

Query: 382 SRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFH 441
           SRVVQ A GERSYHIFYQLCAGAP  LKE+LNLK A++Y YL QS C +I+GVDDAQ FH
Sbjct: 180 SRVVQCARGERSYHIFYQLCAGAPPALKEKLNLKSASEYKYLKQSCCYSINGVDDAQRFH 239

Query: 442 NLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGC 501
            L+EALDIV I KED+E  FAMLAAVLWLGN+SF VIDNENHVE +ADEA++TAA L+GC
Sbjct: 240 TLVEALDIVHISKEDQENVFAMLAAVLWLGNVSFTVIDNENHVEPVADEALSTAAKLIGC 299

Query: 502 SSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVG 561
           + ++LMLALST K+    D+I +KLTLQQAID+RDALAK IY SLFDW+VEQINKSLEVG
Sbjct: 300 NIEDLMLALSTRKMHVNNDNIVQKLTLQQAIDARDALAKSIYASLFDWLVEQINKSLEVG 359

Query: 562 KQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWT 621
           K+ TGRSI+ILDIYGFESF KNSFEQFCINYANERLQQHFNRHLFKLEQEEYE DG+DWT
Sbjct: 360 KRRTGRSISILDIYGFESFDKNSFEQFCINYANERLQQHFNRHLFKLEQEEYEEDGIDWT 419

Query: 622 RVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGRA 681
           +VEFEDN+ECL+L EKKPLG+LSLLDEES FP ATDLTFANKLKQHL +NSCF+GERG A
Sbjct: 420 KVEFEDNQECLDLFEKKPLGLLSLLDEESTFPNATDLTFANKLKQHLKTNSCFRGERGGA 479

Query: 682 FSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQLFASKMLKPSPKPAASSQ 741
           F++RHYAGEV YDT GFLEKNRD L +D IQLLSSC CQ+ QLFAS ML  SP       
Sbjct: 480 FTVRHYAGEVTYDTTGFLEKNRDLLHSDSIQLLSSCKCQLPQLFASSMLIQSPVVGPLYV 539

Query: 742 PGALDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCC 801
             A D+QK SVGTKFKGQLFKLM QLENT PHFIRCIKPN+KQLPGIYE+ LVLQQ RCC
Sbjct: 540 ASAADSQKLSVGTKFKGQLFKLMQQLENTTPHFIRCIKPNNKQLPGIYEQGLVLQQLRCC 599

Query: 802 GVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVG 861
           GVLE+VRISRSGYPTRM HQEFA RYG LL E   SQDPLS+SVA+LQQFN+LPEMYQVG
Sbjct: 600 GVLEVVRISRSGYPTRMTHQEFARRYGFLLLENIASQDPLSVSVAILQQFNILPEMYQVG 659

Query: 862 YTKLYLRSGQLAALEDRR 879
           YTKL+ R+GQ+ ALED R
Sbjct: 660 YTKLFFRTGQIGALEDTR 677

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 677
>gnl|CDD|214580 smart00242, MYSc, Myosin Back     alignment and domain information
>gnl|CDD|238071 cd00124, MYSc, Myosin motor domain Back     alignment and domain information
>gnl|CDD|238673 cd01377, MYSc_type_II, Myosin motor domain, type II myosins Back     alignment and domain information
>gnl|CDD|215687 pfam00063, Myosin_head, Myosin head (motor domain) Back     alignment and domain information
>gnl|CDD|238680 cd01384, MYSc_type_XI, Myosin motor domain, plant-specific type XI myosin, involved in organelle transport Back     alignment and domain information
>gnl|CDD|238676 cd01380, MYSc_type_V, Myosin motor domain, type V myosins Back     alignment and domain information
>gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton] Back     alignment and domain information
>gnl|CDD|238674 cd01378, MYSc_type_I, Myosin motor domain, type I myosins Back     alignment and domain information
>gnl|CDD|238677 cd01381, MYSc_type_VII, Myosin motor domain, type VII myosins Back     alignment and domain information
>gnl|CDD|238683 cd01387, MYSc_type_XV, Myosin motor domain, type XV myosins Back     alignment and domain information
>gnl|CDD|238681 cd01385, MYSc_type_IX, Myosin motor domain, type IX myosins Back     alignment and domain information
>gnl|CDD|238678 cd01382, MYSc_type_VI, Myosin motor domain, type VI myosins Back     alignment and domain information
>gnl|CDD|238675 cd01379, MYSc_type_III, Myosin motor domain, type III myosins Back     alignment and domain information
>gnl|CDD|240229 PTZ00014, PTZ00014, myosin-A; Provisional Back     alignment and domain information
>gnl|CDD|238682 cd01386, MYSc_type_XVIII, Myosin motor domain, type XVIII myosins Back     alignment and domain information
>gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain Back     alignment and domain information
>gnl|CDD|197470 smart00015, IQ, Calmodulin-binding motif Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1095
COG5022 1463 Myosin heavy chain [Cytoskeleton] 100.0
PTZ00014821 myosin-A; Provisional 100.0
cd01383677 MYSc_type_VIII Myosin motor domain, plant-specific 100.0
cd01381671 MYSc_type_VII Myosin motor domain, type VII myosin 100.0
cd01380691 MYSc_type_V Myosin motor domain, type V myosins. M 100.0
cd01377693 MYSc_type_II Myosin motor domain, type II myosins. 100.0
KOG0161 1930 consensus Myosin class II heavy chain [Cytoskeleto 100.0
cd01384674 MYSc_type_XI Myosin motor domain, plant-specific t 100.0
cd01378674 MYSc_type_I Myosin motor domain, type I myosins. M 100.0
cd01387677 MYSc_type_XV Myosin motor domain, type XV myosins. 100.0
cd01385692 MYSc_type_IX Myosin motor domain, type IX myosins. 100.0
cd01382717 MYSc_type_VI Myosin motor domain, type VI myosins. 100.0
KOG01641001 consensus Myosin class I heavy chain [Cytoskeleton 100.0
smart00242677 MYSc Myosin. Large ATPases. ATPase; molecular moto 100.0
cd01379653 MYSc_type_III Myosin motor domain, type III myosin 100.0
cd00124679 MYSc Myosin motor domain. This catalytic (head) do 100.0
cd01386767 MYSc_type_XVIII Myosin motor domain, type XVIII my 100.0
KOG0162 1106 consensus Myosin class I heavy chain [Cytoskeleton 100.0
KOG0163 1259 consensus Myosin class VI heavy chain [Cytoskeleto 100.0
PF00063689 Myosin_head: Myosin head (motor domain); InterPro: 100.0
KOG0160862 consensus Myosin class V heavy chain [Cytoskeleton 100.0
KOG42291062 consensus Myosin VII, myosin IXB and related myosi 100.0
cd01363186 Motor_domain Myosin and Kinesin motor domain. Thes 98.71
KOG0161 1930 consensus Myosin class II heavy chain [Cytoskeleto 98.6
PF0273642 Myosin_N: Myosin N-terminal SH3-like domain; Inter 98.04
KOG42291062 consensus Myosin VII, myosin IXB and related myosi 97.58
KOG0160862 consensus Myosin class V heavy chain [Cytoskeleton 97.51
PF0061221 IQ: IQ calmodulin-binding motif; InterPro: IPR0000 97.14
KOG0520975 consensus Uncharacterized conserved protein, conta 97.04
PF0061221 IQ: IQ calmodulin-binding motif; InterPro: IPR0000 96.4
KOG2128 1401 consensus Ras GTPase-activating protein family - I 96.14
KOG0925699 consensus mRNA splicing factor ATP-dependent RNA h 95.96
smart0001526 IQ Short calmodulin-binding motif containing conse 95.69
KOG0164 1001 consensus Myosin class I heavy chain [Cytoskeleton 95.54
PTZ00014821 myosin-A; Provisional 95.42
KOG0163 1259 consensus Myosin class VI heavy chain [Cytoskeleto 95.38
PF13207121 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6 94.74
smart0001526 IQ Short calmodulin-binding motif containing conse 94.65
PF13401131 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S 93.52
PF13191185 AAA_16: AAA ATPase domain; PDB: 2V1U_A. 93.49
COG5022 1463 Myosin heavy chain [Cytoskeleton] 93.49
PF13238129 AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB 93.44
cd00009151 AAA The AAA+ (ATPases Associated with a wide varie 93.27
TIGR02322179 phosphon_PhnN phosphonate metabolism protein/1,5-b 93.04
TIGR03015269 pepcterm_ATPase putative secretion ATPase, PEP-CTE 93.01
KOG0520975 consensus Uncharacterized conserved protein, conta 92.85
cd0201969 NK Nucleoside/nucleotide kinase (NK) is a protein 92.71
PRK05480209 uridine/cytidine kinase; Provisional 92.11
KOG2128 1401 consensus Ras GTPase-activating protein family - I 92.11
PF00004132 AAA: ATPase family associated with various cellula 92.07
PRK06696223 uridine kinase; Validated 91.99
cd01131198 PilT Pilus retraction ATPase PilT. PilT is a nucle 91.93
PF01583156 APS_kinase: Adenylylsulphate kinase; InterPro: IPR 91.83
cd00820107 PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPC 91.62
smart00382148 AAA ATPases associated with a variety of cellular 91.61
PRK13833323 conjugal transfer protein TrbB; Provisional 91.61
cd01918149 HprK_C HprK/P, the bifunctional histidine-containi 91.61
PRK00300205 gmk guanylate kinase; Provisional 91.59
PF00485194 PRK: Phosphoribulokinase / Uridine kinase family; 91.51
cd01129264 PulE-GspE PulE/GspE The type II secretory pathway 91.47
cd02023198 UMPK Uridine monophosphate kinase (UMPK, EC 2.7.1. 91.4
COG0444316 DppD ABC-type dipeptide/oligopeptide/nickel transp 91.4
TIGR00235207 udk uridine kinase. Model contains a number of lon 91.39
TIGR00150133 HI0065_YjeE ATPase, YjeE family. Members of this f 91.34
COG0194191 Gmk Guanylate kinase [Nucleotide transport and met 91.22
PRK05541176 adenylylsulfate kinase; Provisional 91.19
PRK08233182 hypothetical protein; Provisional 91.14
PRK09270229 nucleoside triphosphate hydrolase domain-containin 90.9
PRK06762166 hypothetical protein; Provisional 90.89
TIGR03420226 DnaA_homol_Hda DnaA regulatory inactivator Hda. Me 90.81
TIGR02173171 cyt_kin_arch cytidylate kinase, putative. Proteins 90.81
cd02020147 CMPK Cytidine monophosphate kinase (CMPK) catalyze 90.77
PF09755310 DUF2046: Uncharacterized conserved protein H4 (DUF 90.72
PRK06547172 hypothetical protein; Provisional 90.61
PTZ00301210 uridine kinase; Provisional 90.59
cd02028179 UMPK_like Uridine monophosphate kinase_like (UMPK_ 90.38
PRK07261171 topology modulation protein; Provisional 90.33
cd02025220 PanK Pantothenate kinase (PanK) catalyzes the phos 90.26
PRK00131175 aroK shikimate kinase; Reviewed 90.18
cd00227175 CPT Chloramphenicol (Cm) phosphotransferase (CPT). 90.05
PRK08118167 topology modulation protein; Reviewed 89.94
PF07724171 AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR 89.94
PRK07196434 fliI flagellum-specific ATP synthase; Validated 89.93
cd01130186 VirB11-like_ATPase Type IV secretory pathway compo 89.93
PRK08084235 DNA replication initiation factor; Provisional 89.87
PF12846304 AAA_10: AAA-like domain 89.85
PF1324576 AAA_19: Part of AAA domain 89.84
PF05729166 NACHT: NACHT domain 89.79
TIGR02928365 orc1/cdc6 family replication initiation protein. M 89.5
COG4026290 Uncharacterized protein containing TOPRIM domain, 89.47
PRK00889175 adenylylsulfate kinase; Provisional 89.38
PF03668284 ATP_bind_2: P-loop ATPase protein family; InterPro 89.34
TIGR01420343 pilT_fam pilus retraction protein PilT. This model 89.3
PRK14737186 gmk guanylate kinase; Provisional 89.25
PRK10078186 ribose 1,5-bisphosphokinase; Provisional 89.24
PF00910107 RNA_helicase: RNA helicase; InterPro: IPR000605 He 89.1
TIGR01313163 therm_gnt_kin carbohydrate kinase, thermoresistant 89.08
TIGR02782299 TrbB_P P-type conjugative transfer ATPase TrbB. Th 89.05
PRK10884206 SH3 domain-containing protein; Provisional 89.01
cd00071137 GMPK Guanosine monophosphate kinase (GMPK, EC 2.7. 88.96
PRK13851344 type IV secretion system protein VirB11; Provision 88.93
PRK14738206 gmk guanylate kinase; Provisional 88.92
cd02024187 NRK1 Nicotinamide riboside kinase (NRK) is an enzy 88.89
PRK14961363 DNA polymerase III subunits gamma and tau; Provisi 88.78
cd02027149 APSK Adenosine 5'-phosphosulfate kinase (APSK) cat 88.6
PF03266168 NTPase_1: NTPase; InterPro: IPR004948 This entry r 88.53
TIGR02524358 dot_icm_DotB Dot/Icm secretion system ATPase DotB. 88.53
PRK03846198 adenylylsulfate kinase; Provisional 88.48
PRK06217183 hypothetical protein; Validated 88.42
PRK13900332 type IV secretion system ATPase VirB11; Provisiona 88.38
cd01120165 RecA-like_NTPases RecA-like NTPases. This family i 88.38
PF00437270 T2SE: Type II/IV secretion system protein; InterPr 88.35
TIGR00554290 panK_bact pantothenate kinase, bacterial type. Sho 88.31
PRK12377248 putative replication protein; Provisional 88.25
PRK10751173 molybdopterin-guanine dinucleotide biosynthesis pr 88.14
TIGR02525372 plasmid_TraJ plasmid transfer ATPase TraJ. Members 88.11
PF13671143 AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1 88.05
KOG0995 581 consensus Centromere-associated protein HEC1 [Cell 88.0
TIGR03263180 guanyl_kin guanylate kinase. Members of this famil 87.97
COG1660286 Predicted P-loop-containing kinase [General functi 87.96
COG1125309 OpuBA ABC-type proline/glycine betaine transport s 87.93
PF0600572 DUF904: Protein of unknown function (DUF904); Inte 87.7
PRK08903227 DnaA regulatory inactivator Hda; Validated 87.66
cd00464154 SK Shikimate kinase (SK) is the fifth enzyme in th 87.57
PF03205140 MobB: Molybdopterin guanine dinucleotide synthesis 87.5
TIGR01360188 aden_kin_iso1 adenylate kinase, isozyme 1 subfamil 87.36
PRK00411394 cdc6 cell division control protein 6; Reviewed 87.24
PRK00440319 rfc replication factor C small subunit; Reviewed 87.05
COG0572218 Udk Uridine kinase [Nucleotide transport and metab 86.94
COG0529197 CysC Adenylylsulfate kinase and related kinases [I 86.91
COG1102179 Cmk Cytidylate kinase [Nucleotide transport and me 86.89
PRK07667193 uridine kinase; Provisional 86.84
cd02021150 GntK Gluconate kinase (GntK) catalyzes the phospho 86.79
PHA02544316 44 clamp loader, small subunit; Provisional 86.78
PRK12402337 replication factor C small subunit 2; Reviewed 86.71
PRK04182180 cytidylate kinase; Provisional 86.67
PRK13764602 ATPase; Provisional 86.57
PRK08727233 hypothetical protein; Validated 86.54
PRK06893229 DNA replication initiation factor; Validated 86.36
COG4608268 AppF ABC-type oligopeptide transport system, ATPas 86.33
COG0563178 Adk Adenylate kinase and related kinases [Nucleoti 86.21
TIGR02533486 type_II_gspE general secretory pathway protein E. 86.2
PRK14527191 adenylate kinase; Provisional 86.16
PRK04040188 adenylate kinase; Provisional 86.0
PRK05057172 aroK shikimate kinase I; Reviewed 85.99
PHA00729226 NTP-binding motif containing protein 85.62
cd03115173 SRP The signal recognition particle (SRP) mediates 85.58
PRK12608380 transcription termination factor Rho; Provisional 85.56
PRK14964491 DNA polymerase III subunits gamma and tau; Provisi 85.46
cd02029277 PRK_like Phosphoribulokinase-like (PRK-like) is a 85.45
PRK09825176 idnK D-gluconate kinase; Provisional 85.34
PRK13894319 conjugal transfer ATPase TrbB; Provisional 84.86
PRK14956484 DNA polymerase III subunits gamma and tau; Provisi 84.82
TIGR01359183 UMP_CMP_kin_fam UMP-CMP kinase family. This subfam 84.81
COG3883 265 Uncharacterized protein conserved in bacteria [Fun 84.79
PRK00698205 tmk thymidylate kinase; Validated 84.77
TIGR00176155 mobB molybdopterin-guanine dinucleotide biosynthes 84.76
PRK14730195 coaE dephospho-CoA kinase; Provisional 84.76
PRK11637 428 AmiB activator; Provisional 84.74
PF1355562 AAA_29: P-loop containing region of AAA domain 84.72
PF03193161 DUF258: Protein of unknown function, DUF258; Inter 84.7
PF0600572 DUF904: Protein of unknown function (DUF904); Inte 84.57
KOG1029 1118 consensus Endocytic adaptor protein intersectin [S 84.48
PF07475171 Hpr_kinase_C: HPr Serine kinase C-terminal domain; 84.46
COG1124252 DppF ABC-type dipeptide/oligopeptide/nickel transp 84.43
TIGR03499282 FlhF flagellar biosynthetic protein FlhF. 84.43
PRK05416288 glmZ(sRNA)-inactivating NTPase; Provisional 84.35
PRK06761282 hypothetical protein; Provisional 84.32
PF02367123 UPF0079: Uncharacterised P-loop hydrolase UPF0079; 84.25
KOG0804493 consensus Cytoplasmic Zn-finger protein BRAP2 (BRC 84.21
PRK06645507 DNA polymerase III subunits gamma and tau; Validat 84.19
PF07728139 AAA_5: AAA domain (dynein-related subfamily); Inte 84.04
PRK14974336 cell division protein FtsY; Provisional 84.02
PF00308219 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 83.97
COG4172534 ABC-type uncharacterized transport system, duplica 83.95
PRK08356195 hypothetical protein; Provisional 83.93
COG4172534 ABC-type uncharacterized transport system, duplica 83.82
COG1123539 ATPase components of various ABC-type transport sy 83.8
PRK09111598 DNA polymerase III subunits gamma and tau; Validat 83.74
TIGR00455184 apsK adenylylsulfate kinase (apsK). Important resi 83.71
PRK08116268 hypothetical protein; Validated 83.69
PF00625183 Guanylate_kin: Guanylate kinase; InterPro: IPR0081 83.59
COG0802149 Predicted ATPase or kinase [General function predi 83.57
PRK15453290 phosphoribulokinase; Provisional 83.54
PRK15093330 antimicrobial peptide ABC transporter ATP-binding 83.52
cd03293220 ABC_NrtD_SsuB_transporters NrtD and SsuB are the A 83.49
COG1123539 ATPase components of various ABC-type transport sy 83.49
PRK14528186 adenylate kinase; Provisional 83.42
PF04665241 Pox_A32: Poxvirus A32 protein; InterPro: IPR006758 83.4
PRK14531183 adenylate kinase; Provisional 83.39
PRK03839180 putative kinase; Provisional 83.38
PRK14957546 DNA polymerase III subunits gamma and tau; Provisi 83.28
cd0198399 Fer4_NifH The Fer4_NifH superfamily contains a var 83.26
TIGR01166190 cbiO cobalt transport protein ATP-binding subunit. 83.25
cd03116159 MobB Molybdenum is an essential trace element in t 83.25
PRK13342413 recombination factor protein RarA; Reviewed 83.24
TIGR02673214 FtsE cell division ATP-binding protein FtsE. This 83.19
PRK11308327 dppF dipeptide transporter ATP-binding subunit; Pr 83.11
TIGR00960216 3a0501s02 Type II (General) Secretory Pathway (IIS 83.09
KOG09241042 consensus mRNA splicing factor ATP-dependent RNA h 83.09
TIGR02788308 VirB11 P-type DNA transfer ATPase VirB11. The VirB 83.08
TIGR02881261 spore_V_K stage V sporulation protein K. Members o 83.05
TIGR03574249 selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal. Mem 83.04
cd01672200 TMPK Thymidine monophosphate kinase (TMPK), also k 82.95
PF00005137 ABC_tran: ABC transporter This structure is on hol 82.91
PHA02530300 pseT polynucleotide kinase; Provisional 82.88
COG2884223 FtsE Predicted ATPase involved in cell division [C 82.79
PRK10416318 signal recognition particle-docking protein FtsY; 82.79
PRK14732196 coaE dephospho-CoA kinase; Provisional 82.76
PRK15177213 Vi polysaccharide export ATP-binding protein VexC; 82.7
PRK14962472 DNA polymerase III subunits gamma and tau; Provisi 82.65
PRK14733204 coaE dephospho-CoA kinase; Provisional 82.65
cd03225211 ABC_cobalt_CbiO_domain1 Domain I of the ABC compon 82.61
COG2805353 PilT Tfp pilus assembly protein, pilus retraction 82.58
cd03259213 ABC_Carb_Solutes_like ABC Carbohydrate and Solute 82.58
TIGR00064272 ftsY signal recognition particle-docking protein F 82.57
PRK10436462 hypothetical protein; Provisional 82.52
PRK09473330 oppD oligopeptide transporter ATP-binding componen 82.5
cd01124187 KaiC KaiC is a circadian clock protein primarily f 82.48
TIGR02902531 spore_lonB ATP-dependent protease LonB. Members of 82.47
PRK15079331 oligopeptide ABC transporter ATP-binding protein O 82.38
cd02034116 CooC The accessory protein CooC, which contains a 82.3
cd03255218 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of 82.26
PRK13768253 GTPase; Provisional 82.25
cd03260227 ABC_PstB_phosphate_transporter Phosphate uptake is 82.19
PRK09112351 DNA polymerase III subunit delta'; Validated 82.15
cd03292214 ABC_FtsE_transporter FtsE is a hydrophilic nucleot 82.02
TIGR00678188 holB DNA polymerase III, delta' subunit. At positi 82.0
TIGR02868529 CydC thiol reductant ABC exporter, CydC subunit. T 81.96
TIGR03608206 L_ocin_972_ABC putative bacteriocin export ABC tra 81.94
PRK11022326 dppD dipeptide transporter ATP-binding subunit; Pr 81.93
PLN03025319 replication factor C subunit; Provisional 81.9
PRK04220301 2-phosphoglycerate kinase; Provisional 81.88
cd03296239 ABC_CysA_sulfate_importer Part of the ABC transpor 81.84
COG1493308 HprK Serine kinase of the HPr protein, regulates c 81.84
KOG4005 292 consensus Transcription factor XBP-1 [Transcriptio 81.8
cd03229178 ABC_Class3 This class is comprised of all BPD (Bin 81.79
TIGR02880284 cbbX_cfxQ probable Rubsico expression protein CbbX 81.75
cd03258233 ABC_MetN_methionine_transporter MetN (also known a 81.64
PF12718143 Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 81.61
PRK14963504 DNA polymerase III subunits gamma and tau; Provisi 81.59
PRK14969527 DNA polymerase III subunits gamma and tau; Provisi 81.55
smart00072184 GuKc Guanylate kinase homologues. Active enzymes c 81.52
PRK06620214 hypothetical protein; Validated 81.51
PRK09087226 hypothetical protein; Validated 81.47
PRK02496184 adk adenylate kinase; Provisional 81.46
PF01695178 IstB_IS21: IstB-like ATP binding protein; InterPro 81.44
COG2204464 AtoC Response regulator containing CheY-like recei 81.41
cd03224222 ABC_TM1139_LivF_branched LivF (TM1139) is part of 81.35
PRK09039 343 hypothetical protein; Validated 81.25
cd02026273 PRK Phosphoribulokinase (PRK) is an enzyme involve 81.22
cd03235213 ABC_Metallic_Cations ABC component of the metal-ty 81.21
PRK00023225 cmk cytidylate kinase; Provisional 81.17
TIGR0244965 conserved hypothetical protein TIGR02449. Members 81.1
PF08317325 Spc7: Spc7 kinetochore protein; InterPro: IPR01325 80.94
COG2274709 SunT ABC-type bacteriocin/lantibiotic exporters, c 80.92
TIGR00152188 dephospho-CoA kinase. This model produces scores i 80.9
TIGR03864236 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, 80.89
PF13479213 AAA_24: AAA domain 80.85
PLN02796347 D-glycerate 3-kinase 80.84
PRK07003830 DNA polymerase III subunits gamma and tau; Validat 80.82
cd03297214 ABC_ModC_molybdenum_transporter ModC is an ABC-typ 80.79
cd03256241 ABC_PhnC_transporter ABC-type phosphate/phosphonat 80.74
PF00158168 Sigma54_activat: Sigma-54 interaction domain; Inte 80.63
PRK03731171 aroL shikimate kinase II; Reviewed 80.62
COG4619223 ABC-type uncharacterized transport system, ATPase 80.61
PF01637234 Arch_ATPase: Archaeal ATPase; InterPro: IPR011579 80.59
PRK09099441 type III secretion system ATPase; Provisional 80.55
TIGR02315243 ABC_phnC phosphonate ABC transporter, ATP-binding 80.55
PRK11637 428 AmiB activator; Provisional 80.54
KOG0971 1243 consensus Microtubule-associated protein dynactin 80.54
PTZ001121164 origin recognition complex 1 protein; Provisional 80.53
cd03268208 ABC_BcrA_bacitracin_resist The BcrA subfamily repr 80.51
PRK05342412 clpX ATP-dependent protease ATP-binding subunit Cl 80.5
COG2804500 PulE Type II secretory pathway, ATPase PulE/Tfp pi 80.46
PF06785 401 UPF0242: Uncharacterised protein family (UPF0242); 80.46
PLN02318656 phosphoribulokinase/uridine kinase 80.39
cd03219236 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC trans 80.37
PRK11176582 lipid transporter ATP-binding/permease protein; Pr 80.32
PF01580205 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR00 80.26
cd03223166 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cass 80.21
cd03265220 ABC_DrrA DrrA is the ATP-binding protein component 80.17
PRK14959624 DNA polymerase III subunits gamma and tau; Provisi 80.1
PRK14950585 DNA polymerase III subunits gamma and tau; Provisi 80.1
PRK14530215 adenylate kinase; Provisional 80.08
PRK11124242 artP arginine transporter ATP-binding subunit; Pro 80.04
cd03266218 ABC_NatA_sodium_exporter NatA is the ATPase compon 80.01
>COG5022 Myosin heavy chain [Cytoskeleton] Back     alignment and domain information 
Probab=100.00  E-value=1.5e-207  Score=1879.26  Aligned_cols=754  Identities=46%  Similarity=0.760  Sum_probs=694.7

Q ss_pred             CCcEEEEEcCCCCEEEEEEEEeeCCeEEEE----ecCCeEEEEeCCCcc--cCCCCcccCcCCccccccCCchhHHHHHH
Q 001346          157 KKLRVWCRLEDGKWESGMIQSTSGDEAFVL----LSNGNVVKVSTGELL--PANPDILEGVDDLIQLSYLNEPSVLNNIQ  230 (1095)
Q Consensus       157 ~~~~vW~~~~~~~~~~~~v~~~~~~~~~v~----~~~g~~~~v~~~~~~--~~np~~~~~~~Dl~~L~~LnE~svL~~L~  230 (1095)
                      .|..||+|+.+.+|..|.+.+..-.+..|.    ..+|....|+...+.  ..+||.++++|||+.|+|||||+|||||+
T Consensus         8 ~g~~~w~p~~e~~Wi~~~~~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~P~~~~vdDLt~LSyLNEpsVl~nL~   87 (1463)
T COG5022           8 VGSGCWIPDEEKGWIWAEIIKEAFNKGKVTEEGKKEDGESVSVKKKVLGNDRIKLPKFDGVDDLTELSYLNEPAVLHNLE   87 (1463)
T ss_pred             cCceeeeeccccceeeeeechhhhhccccccchhhccCcccceeehhcccccccCccccCchhhhhhhccCcHHHHHHHH
Confidence            488999999999999999988743322222    235655566555443  34577999999999999999999999999


Q ss_pred             HHhhcCccccccCCcEEEEcCCCCCCCCChHHHHHHcccCCC--CCchhHHHHHHHHHHhhCCCceEEEEcCCCCCChhh
Q 001346          231 YRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMD--SPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTE  308 (1095)
Q Consensus       231 ~Ry~~~~iYT~~G~iLiavNP~k~l~~Y~~~~~~~y~~~~~~--~PHiyavA~~Ay~~m~~~~~~QsIiisGESGAGKTe  308 (1095)
                      +||.+++||||.|.+|||||||+++|||++++++.|.++...  +|||||||+.||+.|...++||||||||||||||||
T Consensus        88 kRY~n~~IYTYSGlvLIAvNPy~~L~iYt~d~i~~Y~~K~r~el~PHvfAIAe~aY~~lls~~eNQtIiISGESGAGKTe  167 (1463)
T COG5022          88 KRYNNGQIYTYSGLVLIAVNPYRDLGIYTDDIIQSYSGKNRLELEPHVFAIAEEAYRNLLSEKENQTIIISGESGAGKTE  167 (1463)
T ss_pred             HHhhcCceeEEeeeEEEEecCcccCCCccHHHHHHhccCccccCCchHHHHHHHHHHHHHhcCCCceEEEecCCCCCchH
Confidence            999999999999999999999999999999999999998866  799999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCc----chHHHHHhhhHHHHHhcccccCCCCCCCccccEEEEEEcCCCceeeeEeeeeecccccc
Q 001346          309 TAKFAMQYLAALGGGSE----GIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRV  384 (1095)
Q Consensus       309 ~~K~il~yLa~~~~~~~----~ie~~il~snpiLEAFGNAkT~rN~NSSRFGK~i~l~f~~~g~i~Ga~i~~yLLEksRV  384 (1095)
                      +||.||+|||+++++++    .||.+||++||||||||||||+||||||||||||+|.||.+|.|+||+|++||||||||
T Consensus       168 ~aK~ImqYlasv~~s~~~~~~~iE~~ILaTNPILEAFGNAkTvRNdNSSRFGKyikI~Fd~~g~I~GA~I~~YLLEKSRV  247 (1463)
T COG5022         168 NAKRIMQYLASVTSSSTVEISSIEKQILATNPILEAFGNAKTVRNDNSSRFGKYIKIEFDENGEICGAKIETYLLEKSRV  247 (1463)
T ss_pred             HHHHHHHHHHHhccCCcchHHHHHHHHHhcchHHHHhccccccccCCcccccceEEEEECCCCceechhhhhhhhhhhhh
Confidence            99999999999988765    89999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCcccchhhhhcCCChhhHHhcCCCCCCCCCcccCCCccccCCcchHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Q 001346          385 VQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAML  464 (1095)
Q Consensus       385 v~~~~gERnfHIFYqLl~G~~~~~~~~l~L~~~~~y~yL~~~~~~~~~~~dD~~~f~~l~~Al~~lG~~~~e~~~i~~iL  464 (1095)
                      |+|+.+|||||||||||+|+++..++.+++..+.+|.||++++|..++|+||+++|+.|+.||++|||+.++|.+||+||
T Consensus       248 V~Q~~~ERNYHIFYQll~G~~~~~k~~~~~~~~~dY~Yl~~~~~~~I~gIdD~kefk~t~~AlktiGi~~eeq~~IF~iL  327 (1463)
T COG5022         248 VHQNKNERNYHIFYQLLAGDPEELKKLLLLQNPKDYIYLSQGGCDKIDGIDDAKEFKITLDALKTIGIDEEEQDQIFKIL  327 (1463)
T ss_pred             ccCCCCccchhhhhhHhcCChHHHHHHhhccChHhhHhHhhcCCCcCCCcccHHHHHHHHHHHHHhCCChHHHHHHHHHH
Confidence            99999999999999999998888888888899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCceEEEecCCCceeecChHHHHHHHHhcCCCHHHHHHhHhhcEEeeCCceEEecCCHHHHHHHHHHHHHHHHH
Q 001346          465 AAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYG  544 (1095)
Q Consensus       465 aAILhLGni~F~~~~~~~~~~~~~~~~l~~aa~LLgv~~~~L~~~L~~~~~~~~~e~i~~~l~~~qA~~~rDalak~LY~  544 (1095)
                      |||||||||+|..+ .++.+.+.+.+.++.+|.|||||++.|.++|++|.|++++|.|.+++|..||..+||||||+||+
T Consensus       328 AaILhiGNIef~~~-r~g~a~~~~~~~~~~~c~LLgId~~~f~k~lvk~~ikt~~E~i~~~~n~~QA~~irdslAK~lY~  406 (1463)
T COG5022         328 AAILHIGNIEFKED-RNGAAIFSDNSVLDKACYLLGIDPSLFVKWLVKRQIKTGGEWIVVPLNLEQALAIRDSLAKALYS  406 (1463)
T ss_pred             HHHHhhcceeeeec-ccchhhcCCchHHHHHHHHhCCCHHHHHHHHHHhHhhcCceEEEecCCHHHHHHHHHHHHHHHHH
Confidence            99999999999953 44567788899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcccccccCCCCccceeEeecccCcccCCCCChhHHHhhhhhHHHHHHHHHhhhhhhHhhhhhcCCceeeec
Q 001346          545 SLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVE  624 (1095)
Q Consensus       545 ~LF~wlV~~IN~~L~~~~~~~~~~IgILDi~GFE~f~~NsfEQLcINyaNEkLQ~~f~~~~F~~eq~eY~~EgI~~~~i~  624 (1095)
                      +||+|||++||.+|..+.. ..+|||||||||||+|+.|||||||||||||||||+||+|||++||+||.+|||+|++|+
T Consensus       407 ~lFdwiV~rIN~sL~~~~~-~~~fIGVLDIyGFEiFEkNSFEQlCINYtNEKLQQ~Fn~h~FklEQEeY~kE~IeW~~Id  485 (1463)
T COG5022         407 NLFDWIVDRINKSLDHSAA-ASNFIGVLDIYGFEIFEKNSFEQLCINYTNEKLQQFFNQHMFKLEQEEYVKEGIEWSFID  485 (1463)
T ss_pred             HHHHHHHHHHHhhccCccc-cccceeEEeecchhhhccCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCcccccc
Confidence            9999999999999997654 568999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccChHHHHHHHhc-CCCccccccccccCCCCCChHHHHHHHHHHhC--CCCccccCC--CCCeEEeccCccccccccchh
Q 001346          625 FEDNEECLNLIEK-KPLGVLSLLDEESNFPKATDLTFANKLKQHLG--SNSCFKGER--GRAFSIRHYAGEVPYDTNGFL  699 (1095)
Q Consensus       625 f~dN~~~ldLie~-~p~Gll~lLDeE~~~p~~sd~~f~~kl~~~~~--~~~~f~~~~--~~~F~I~HyaG~V~Y~~~gfl  699 (1095)
                      |.||++||||||+ .|.|||++|||||.+|.|||++|..||.+.+.  +++.|.++|  ...|+|.||||+|.|+++||+
T Consensus       486 y~DnQ~~IDLIE~~~p~GIlslLDEE~~~p~atd~s~~sKL~~~l~~~~~~~f~~~rf~~~~FvvkHYAgDVeY~veg~l  565 (1463)
T COG5022         486 YFDNQPCIDLIEKKNPLGILSLLDEECVMPHATDESFTSKLAQRLNKNSNPKFKKSRFRDNKFVVKHYAGDVEYDVEGFL  565 (1463)
T ss_pred             cccCcchhHHHhccCCCchHhhhcHHhcCCCCCchHHHHHHHHHhccccCccccccccCCCceEEEeecccceeeccchh
Confidence            9999999999997 47999999999999999999999999999886  567788764  568999999999999999999


Q ss_pred             hhccCcchHHHHHHHhhchHHH-HHHhhcccCCCCCCCCCCCCCCCCCcCccchHHHHHHHHHHHHHHHhccCCeeeEec
Q 001346          700 EKNRDPLQTDIIQLLSSCTCQV-LQLFASKMLKPSPKPAASSQPGALDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCI  778 (1095)
Q Consensus       700 eKN~D~l~~d~~~ll~~S~~~l-~~lf~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~fk~qL~~L~~~L~~t~~hfIrCI  778 (1095)
                      +||+|+++.++++||.+|++++ ..+|.......+            ..+++|+++.||.||..||++|++|+|||||||
T Consensus       566 dKNkD~l~~~ll~Ll~~StNe~vs~Lf~~~~~~~~------------K~~~pT~gs~~K~sl~~Lm~tl~sTqphyIRCI  633 (1463)
T COG5022         566 DKNKDPLNDDLLELLKASTNEFVSTLFDDEENIES------------KGRFPTLGSRFKESLNSLMSTLNSTQPHYIRCI  633 (1463)
T ss_pred             hhCcchhhHHHHHHHhhccchHHHHhhhhhhhccc------------cCCCCcHHHHHHHHHHHHHHHHHhcCCceeEee
Confidence            9999999999999999999986 578873332111            245689999999999999999999999999999


Q ss_pred             cCCCCCCCcccchhHHHHhhhhhchhHHHHHHhhCCCcccchhhHHHhhhccccccccC------CChHHHHHHHHHhcC
Q 001346          779 KPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLS------QDPLSISVAVLQQFN  852 (1095)
Q Consensus       779 kPN~~k~p~~fd~~~V~~QLr~~gvle~vri~r~Gyp~r~~~~eF~~RY~~L~~~~~~~------~d~~~~~~~iL~~~~  852 (1095)
                      |||..|.|+.||..+|++|||||||||+|||+|+|||.|++|+||+.||++|.|.....      .|.+.+|..||....
T Consensus       634 kPN~~K~p~~fD~~mVL~QLr~~GVlE~IRIsraGFP~R~~f~EFv~RY~IL~p~~~~~~~~~~~~~~~~~~~~IL~~~~  713 (1463)
T COG5022         634 KPNEEKSPWTFDNQMVLSQLRCCGVLETIRISRAGFPSRWTFDEFVQRYRILSPSKSWTGEYTWKEDTKNAVKSILEELV  713 (1463)
T ss_pred             CCCcccCccccchHHHHHHHHhcchhhheeeccccCchhhhHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHhhc
Confidence            99999999999999999999999999999999999999999999999999999975432      356889999999999


Q ss_pred             CCCcceeeceeeeeeccchhHHhhhhhhhHHH-HHHHHHHHHhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHH
Q 001346          853 VLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQ-AIIRLQKCFRGYQARSRFRELCNGVITLQSFARGENTRRR  924 (1095)
Q Consensus       853 l~~~~yqiGkTKVFLr~g~l~~LE~~R~~~l~-aai~IQa~~Rg~~aRr~y~~lr~aai~IQs~~Rg~~aRr~  924 (1095)
                      ++...||+|.||||||+|+++.||.+|...+. .++.||++|||+..|++|....+.+..+|...+|++.|+.
T Consensus       714 id~~~YqiG~TKvFfKagvL~~LE~~Rd~~~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~  786 (1463)
T COG5022         714 IDSSKYQIGNTKVFFKAGVLAALEDMRDAKLDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRL  786 (1463)
T ss_pred             CChhheeccceeEEeeCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhh
Confidence            99999999999999999999999999998886 6789999999999999999887766666666665555543

>PTZ00014 myosin-A; Provisional Back     alignment and domain information
>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata Back     alignment and domain information
>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins Back     alignment and domain information
>cd01380 MYSc_type_V Myosin motor domain, type V myosins Back     alignment and domain information
>cd01377 MYSc_type_II Myosin motor domain, type II myosins Back     alignment and domain information
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] Back     alignment and domain information
>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport Back     alignment and domain information
>cd01378 MYSc_type_I Myosin motor domain, type I myosins Back     alignment and domain information
>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins Back     alignment and domain information
>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins Back     alignment and domain information
>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins Back     alignment and domain information
>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton] Back     alignment and domain information
>smart00242 MYSc Myosin Back     alignment and domain information
>cd01379 MYSc_type_III Myosin motor domain, type III myosins Back     alignment and domain information
>cd00124 MYSc Myosin motor domain Back     alignment and domain information
>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins Back     alignment and domain information
>KOG0162 consensus Myosin class I heavy chain [Cytoskeleton] Back     alignment and domain information
>KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton] Back     alignment and domain information
>PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril Back     alignment and domain information
>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton] Back     alignment and domain information
>KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility] Back     alignment and domain information
>cd01363 Motor_domain Myosin and Kinesin motor domain Back     alignment and domain information
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] Back     alignment and domain information
>PF02736 Myosin_N: Myosin N-terminal SH3-like domain; InterPro: IPR004009 This domain has an SH3-like fold Back     alignment and domain information
>KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility] Back     alignment and domain information
>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton] Back     alignment and domain information
>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K Back     alignment and domain information
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] Back     alignment and domain information
>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K Back     alignment and domain information
>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] Back     alignment and domain information
>KOG0925 consensus mRNA splicing factor ATP-dependent RNA helicase [RNA processing and modification] Back     alignment and domain information
>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues Back     alignment and domain information
>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton] Back     alignment and domain information
>PTZ00014 myosin-A; Provisional Back     alignment and domain information
>KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton] Back     alignment and domain information
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A Back     alignment and domain information
>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues Back     alignment and domain information
>PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B Back     alignment and domain information
>PF13191 AAA_16: AAA ATPase domain; PDB: 2V1U_A Back     alignment and domain information
>COG5022 Myosin heavy chain [Cytoskeleton] Back     alignment and domain information
>PF13238 AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB_A 3IIM_A 2AXP_A 3KB2_A 1KHT_A 1NKS_A 3H86_C Back     alignment and domain information
>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold Back     alignment and domain information
>TIGR02322 phosphon_PhnN phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN Back     alignment and domain information
>TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily Back     alignment and domain information
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] Back     alignment and domain information
>cd02019 NK Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates to nucleosides/nucleotides, nucleoside monophosphates, or sugars Back     alignment and domain information
>PRK05480 uridine/cytidine kinase; Provisional Back     alignment and domain information
>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] Back     alignment and domain information
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport Back     alignment and domain information
>PRK06696 uridine kinase; Validated Back     alignment and domain information
>cd01131 PilT Pilus retraction ATPase PilT Back     alignment and domain information
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases Back     alignment and domain information
>cd00820 PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPCK), a critical gluconeogenic enzyme, catalyzes the first committed step in the diversion of tricarboxylic acid cycle intermediates toward gluconeogenesis Back     alignment and domain information
>smart00382 AAA ATPases associated with a variety of cellular activities Back     alignment and domain information
>PRK13833 conjugal transfer protein TrbB; Provisional Back     alignment and domain information
>cd01918 HprK_C HprK/P, the bifunctional histidine-containing protein kinase/phosphatase, controls the phosphorylation state of the phosphocarrier protein HPr and regulates the utilization of carbon sources by gram-positive bacteria Back     alignment and domain information
>PRK00300 gmk guanylate kinase; Provisional Back     alignment and domain information
>PF00485 PRK: Phosphoribulokinase / Uridine kinase family; InterPro: IPR006083 Phosphoribulokinase (PRK) 2 Back     alignment and domain information
>cd01129 PulE-GspE PulE/GspE The type II secretory pathway is the main terminal branch of the general secretory pathway (GSP) Back     alignment and domain information
>cd02023 UMPK Uridine monophosphate kinase (UMPK, EC 2 Back     alignment and domain information
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00235 udk uridine kinase Back     alignment and domain information
>TIGR00150 HI0065_YjeE ATPase, YjeE family Back     alignment and domain information
>COG0194 Gmk Guanylate kinase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK05541 adenylylsulfate kinase; Provisional Back     alignment and domain information
>PRK08233 hypothetical protein; Provisional Back     alignment and domain information
>PRK09270 nucleoside triphosphate hydrolase domain-containing protein; Reviewed Back     alignment and domain information
>PRK06762 hypothetical protein; Provisional Back     alignment and domain information
>TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda Back     alignment and domain information
>TIGR02173 cyt_kin_arch cytidylate kinase, putative Back     alignment and domain information
>cd02020 CMPK Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine monophosphate (CMP) to produce cytidine diphosphate (CDP), using ATP as the preferred phosphoryl donor Back     alignment and domain information
>PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain Back     alignment and domain information
>PRK06547 hypothetical protein; Provisional Back     alignment and domain information
>PTZ00301 uridine kinase; Provisional Back     alignment and domain information
>cd02028 UMPK_like Uridine monophosphate kinase_like (UMPK_like) is a family of proteins highly similar to the uridine monophosphate kinase (UMPK, EC 2 Back     alignment and domain information
>PRK07261 topology modulation protein; Provisional Back     alignment and domain information
>cd02025 PanK Pantothenate kinase (PanK) catalyzes the phosphorylation of pantothenic acid to form 4'-phosphopantothenic, which is the first of five steps in coenzyme A (CoA) biosynthetic pathway Back     alignment and domain information
>PRK00131 aroK shikimate kinase; Reviewed Back     alignment and domain information
>cd00227 CPT Chloramphenicol (Cm) phosphotransferase (CPT) Back     alignment and domain information
>PRK08118 topology modulation protein; Reviewed Back     alignment and domain information
>PF07724 AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR013093 ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] Back     alignment and domain information
>PRK07196 fliI flagellum-specific ATP synthase; Validated Back     alignment and domain information
>cd01130 VirB11-like_ATPase Type IV secretory pathway component VirB11, and related ATPases Back     alignment and domain information
>PRK08084 DNA replication initiation factor; Provisional Back     alignment and domain information
>PF12846 AAA_10: AAA-like domain Back     alignment and domain information
>PF13245 AAA_19: Part of AAA domain Back     alignment and domain information
>PF05729 NACHT: NACHT domain Back     alignment and domain information
>TIGR02928 orc1/cdc6 family replication initiation protein Back     alignment and domain information
>COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only] Back     alignment and domain information
>PRK00889 adenylylsulfate kinase; Provisional Back     alignment and domain information
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins Back     alignment and domain information
>TIGR01420 pilT_fam pilus retraction protein PilT Back     alignment and domain information
>PRK14737 gmk guanylate kinase; Provisional Back     alignment and domain information
>PRK10078 ribose 1,5-bisphosphokinase; Provisional Back     alignment and domain information
>PF00910 RNA_helicase: RNA helicase; InterPro: IPR000605 Helicases have been classified in 5 superfamilies (SF1-SF5) Back     alignment and domain information
>TIGR01313 therm_gnt_kin carbohydrate kinase, thermoresistant glucokinase family Back     alignment and domain information
>TIGR02782 TrbB_P P-type conjugative transfer ATPase TrbB Back     alignment and domain information
>PRK10884 SH3 domain-containing protein; Provisional Back     alignment and domain information
>cd00071 GMPK Guanosine monophosphate kinase (GMPK, EC 2 Back     alignment and domain information
>PRK13851 type IV secretion system protein VirB11; Provisional Back     alignment and domain information
>PRK14738 gmk guanylate kinase; Provisional Back     alignment and domain information
>cd02024 NRK1 Nicotinamide riboside kinase (NRK) is an enzyme involved in the metabolism of nicotinamide adenine dinucleotide (NAD+) Back     alignment and domain information
>PRK14961 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>cd02027 APSK Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the phosphorylation of adenosine 5'-phosphosulfate to form 3'-phosphoadenosine 5'-phosphosulfate (PAPS) Back     alignment and domain information
>PF03266 NTPase_1: NTPase; InterPro: IPR004948 This entry represents a family of nucleoside-triphosphatases which have activity towards ATP, GTP, CTP, TTP and UTP and may hydrolyse nucleoside diphosphates with lower efficiency [] Back     alignment and domain information
>TIGR02524 dot_icm_DotB Dot/Icm secretion system ATPase DotB Back     alignment and domain information
>PRK03846 adenylylsulfate kinase; Provisional Back     alignment and domain information
>PRK06217 hypothetical protein; Validated Back     alignment and domain information
>PRK13900 type IV secretion system ATPase VirB11; Provisional Back     alignment and domain information
>cd01120 RecA-like_NTPases RecA-like NTPases Back     alignment and domain information
>PF00437 T2SE: Type II/IV secretion system protein; InterPro: IPR001482 A number of bacterial proteins, some of which are involved in a general secretion pathway (GSP) for the export of proteins (also called the type II pathway) belong to this group [, ] Back     alignment and domain information
>TIGR00554 panK_bact pantothenate kinase, bacterial type Back     alignment and domain information
>PRK12377 putative replication protein; Provisional Back     alignment and domain information
>PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional Back     alignment and domain information
>TIGR02525 plasmid_TraJ plasmid transfer ATPase TraJ Back     alignment and domain information
>PF13671 AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1_A 1RRC_A 1RPZ_A 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B Back     alignment and domain information
>KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>TIGR03263 guanyl_kin guanylate kinase Back     alignment and domain information
>COG1660 Predicted P-loop-containing kinase [General function prediction only] Back     alignment and domain information
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] Back     alignment and domain information
>PF06005 DUF904: Protein of unknown function (DUF904); InterPro: IPR009252 Cell division protein ZapB is a non-essential, abundant cell division factor that is required for proper Z-ring formation Back     alignment and domain information
>PRK08903 DnaA regulatory inactivator Hda; Validated Back     alignment and domain information
>cd00464 SK Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants Back     alignment and domain information
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A Back     alignment and domain information
>TIGR01360 aden_kin_iso1 adenylate kinase, isozyme 1 subfamily Back     alignment and domain information
>PRK00411 cdc6 cell division control protein 6; Reviewed Back     alignment and domain information
>PRK00440 rfc replication factor C small subunit; Reviewed Back     alignment and domain information
>COG0572 Udk Uridine kinase [Nucleotide transport and metabolism] Back     alignment and domain information
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG1102 Cmk Cytidylate kinase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK07667 uridine kinase; Provisional Back     alignment and domain information
>cd02021 GntK Gluconate kinase (GntK) catalyzes the phosphoryl transfer from ATP to gluconate Back     alignment and domain information
>PHA02544 44 clamp loader, small subunit; Provisional Back     alignment and domain information
>PRK12402 replication factor C small subunit 2; Reviewed Back     alignment and domain information
>PRK04182 cytidylate kinase; Provisional Back     alignment and domain information
>PRK13764 ATPase; Provisional Back     alignment and domain information
>PRK08727 hypothetical protein; Validated Back     alignment and domain information
>PRK06893 DNA replication initiation factor; Validated Back     alignment and domain information
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] Back     alignment and domain information
>COG0563 Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR02533 type_II_gspE general secretory pathway protein E Back     alignment and domain information
>PRK14527 adenylate kinase; Provisional Back     alignment and domain information
>PRK04040 adenylate kinase; Provisional Back     alignment and domain information
>PRK05057 aroK shikimate kinase I; Reviewed Back     alignment and domain information
>PHA00729 NTP-binding motif containing protein Back     alignment and domain information
>cd03115 SRP The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes Back     alignment and domain information
>PRK12608 transcription termination factor Rho; Provisional Back     alignment and domain information
>PRK14964 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>cd02029 PRK_like Phosphoribulokinase-like (PRK-like) is a family of proteins similar to phosphoribulokinase (PRK), the enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes Back     alignment and domain information
>PRK09825 idnK D-gluconate kinase; Provisional Back     alignment and domain information
>PRK13894 conjugal transfer ATPase TrbB; Provisional Back     alignment and domain information
>PRK14956 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>TIGR01359 UMP_CMP_kin_fam UMP-CMP kinase family Back     alignment and domain information
>COG3883 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PRK00698 tmk thymidylate kinase; Validated Back     alignment and domain information
>TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB Back     alignment and domain information
>PRK14730 coaE dephospho-CoA kinase; Provisional Back     alignment and domain information
>PRK11637 AmiB activator; Provisional Back     alignment and domain information
>PF13555 AAA_29: P-loop containing region of AAA domain Back     alignment and domain information
>PF03193 DUF258: Protein of unknown function, DUF258; InterPro: IPR004881 This entry contains Escherichia coli (strain K12) RsgA, which may play a role in 30S ribosomal subunit biogenesis Back     alignment and domain information
>PF06005 DUF904: Protein of unknown function (DUF904); InterPro: IPR009252 Cell division protein ZapB is a non-essential, abundant cell division factor that is required for proper Z-ring formation Back     alignment and domain information
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF07475 Hpr_kinase_C: HPr Serine kinase C-terminal domain; InterPro: IPR011104 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions [] Back     alignment and domain information
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR03499 FlhF flagellar biosynthetic protein FlhF Back     alignment and domain information
>PRK05416 glmZ(sRNA)-inactivating NTPase; Provisional Back     alignment and domain information
>PRK06761 hypothetical protein; Provisional Back     alignment and domain information
>PF02367 UPF0079: Uncharacterised P-loop hydrolase UPF0079; InterPro: IPR003442 This group consists of bacterial proteins, which contain a P-loop Back     alignment and domain information
>KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] Back     alignment and domain information
>PRK06645 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PF07728 AAA_5: AAA domain (dynein-related subfamily); InterPro: IPR011704 The ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] Back     alignment and domain information
>PRK14974 cell division protein FtsY; Provisional Back     alignment and domain information
>PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication Back     alignment and domain information
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] Back     alignment and domain information
>PRK08356 hypothetical protein; Provisional Back     alignment and domain information
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] Back     alignment and domain information
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] Back     alignment and domain information
>PRK09111 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>TIGR00455 apsK adenylylsulfate kinase (apsK) Back     alignment and domain information
>PRK08116 hypothetical protein; Validated Back     alignment and domain information
>PF00625 Guanylate_kin: Guanylate kinase; InterPro: IPR008144 Guanylate kinase (2 Back     alignment and domain information
>COG0802 Predicted ATPase or kinase [General function prediction only] Back     alignment and domain information
>PRK15453 phosphoribulokinase; Provisional Back     alignment and domain information
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively Back     alignment and domain information
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] Back     alignment and domain information
>PRK14528 adenylate kinase; Provisional Back     alignment and domain information
>PF04665 Pox_A32: Poxvirus A32 protein; InterPro: IPR006758 This entry contains uncharacterised proteins belonging to the B354L family which include the pox virus A32 protein Back     alignment and domain information
>PRK14531 adenylate kinase; Provisional Back     alignment and domain information
>PRK03839 putative kinase; Provisional Back     alignment and domain information
>PRK14957 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain Back     alignment and domain information
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit Back     alignment and domain information
>cd03116 MobB Molybdenum is an essential trace element in the form of molybdenum cofactor (Moco) which is associated with the metabolism of nitrogen, carbon and sulfur by redox active enzymes Back     alignment and domain information
>PRK13342 recombination factor protein RarA; Reviewed Back     alignment and domain information
>TIGR02673 FtsE cell division ATP-binding protein FtsE Back     alignment and domain information
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein Back     alignment and domain information
>KOG0924 consensus mRNA splicing factor ATP-dependent RNA helicase [RNA processing and modification] Back     alignment and domain information
>TIGR02788 VirB11 P-type DNA transfer ATPase VirB11 Back     alignment and domain information
>TIGR02881 spore_V_K stage V sporulation protein K Back     alignment and domain information
>TIGR03574 selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal Back     alignment and domain information
>cd01672 TMPK Thymidine monophosphate kinase (TMPK), also known as thymidylate kinase, catalyzes the phosphorylation of thymidine monophosphate (TMP) to thymidine diphosphate (TDP) utilizing ATP as its preferred phophoryl donor Back     alignment and domain information
>PF00005 ABC_tran: ABC transporter This structure is on hold until Dec 1999; InterPro: IPR003439 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems Back     alignment and domain information
>PHA02530 pseT polynucleotide kinase; Provisional Back     alignment and domain information
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] Back     alignment and domain information
>PRK10416 signal recognition particle-docking protein FtsY; Provisional Back     alignment and domain information
>PRK14732 coaE dephospho-CoA kinase; Provisional Back     alignment and domain information
>PRK15177 Vi polysaccharide export ATP-binding protein VexC; Provisional Back     alignment and domain information
>PRK14962 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK14733 coaE dephospho-CoA kinase; Provisional Back     alignment and domain information
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota Back     alignment and domain information
>COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup Back     alignment and domain information
>TIGR00064 ftsY signal recognition particle-docking protein FtsY Back     alignment and domain information
>PRK10436 hypothetical protein; Provisional Back     alignment and domain information
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional Back     alignment and domain information
>cd01124 KaiC KaiC is a circadian clock protein primarily found in cyanobacteria KaiC is a RecA-like ATPase, having both Walker A and Walker B motifs Back     alignment and domain information
>TIGR02902 spore_lonB ATP-dependent protease LonB Back     alignment and domain information
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional Back     alignment and domain information
>cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH) Back     alignment and domain information
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE) Back     alignment and domain information
>PRK13768 GTPase; Provisional Back     alignment and domain information
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient Back     alignment and domain information
>PRK09112 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane Back     alignment and domain information
>TIGR00678 holB DNA polymerase III, delta' subunit Back     alignment and domain information
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit Back     alignment and domain information
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group Back     alignment and domain information
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PLN03025 replication factor C subunit; Provisional Back     alignment and domain information
>PRK04220 2-phosphoglycerate kinase; Provisional Back     alignment and domain information
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import Back     alignment and domain information
>COG1493 HprK Serine kinase of the HPr protein, regulates carbohydrate metabolism [Signal transduction mechanisms] Back     alignment and domain information
>KOG4005 consensus Transcription factor XBP-1 [Transcription] Back     alignment and domain information
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment Back     alignment and domain information
>TIGR02880 cbbX_cfxQ probable Rubsico expression protein CbbX Back     alignment and domain information
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport Back     alignment and domain information
>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells Back     alignment and domain information
>PRK14963 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK14969 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>smart00072 GuKc Guanylate kinase homologues Back     alignment and domain information
>PRK06620 hypothetical protein; Validated Back     alignment and domain information
>PRK09087 hypothetical protein; Validated Back     alignment and domain information
>PRK02496 adk adenylate kinase; Provisional Back     alignment and domain information
>PF01695 IstB_IS21: IstB-like ATP binding protein; InterPro: IPR002611 Proteins in this entry contain an ATP/GTP binding P-loop motif Back     alignment and domain information
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] Back     alignment and domain information
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids Back     alignment and domain information
>PRK09039 hypothetical protein; Validated Back     alignment and domain information
>cd02026 PRK Phosphoribulokinase (PRK) is an enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes Back     alignment and domain information
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters Back     alignment and domain information
>PRK00023 cmk cytidylate kinase; Provisional Back     alignment and domain information
>TIGR02449 conserved hypothetical protein TIGR02449 Back     alignment and domain information
>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] Back     alignment and domain information
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] Back     alignment and domain information
>TIGR00152 dephospho-CoA kinase Back     alignment and domain information
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system Back     alignment and domain information
>PF13479 AAA_24: AAA domain Back     alignment and domain information
>PLN02796 D-glycerate 3-kinase Back     alignment and domain information
>PRK07003 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB Back     alignment and domain information
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system Back     alignment and domain information
>PF00158 Sigma54_activat: Sigma-54 interaction domain; InterPro: IPR002078 Some bacterial regulatory proteins activate the expression of genes from promoters recognised by core RNA polymerase associated with the alternative sigma-54 factor Back     alignment and domain information
>PRK03731 aroL shikimate kinase II; Reviewed Back     alignment and domain information
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only] Back     alignment and domain information
>PF01637 Arch_ATPase: Archaeal ATPase; InterPro: IPR011579 This domain has been found in a number of bacterial and archaeal proteins, all of which contain a conserved P-loop motif that is involved in binding ATP Back     alignment and domain information
>PRK09099 type III secretion system ATPase; Provisional Back     alignment and domain information
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein Back     alignment and domain information
>PRK11637 AmiB activator; Provisional Back     alignment and domain information
>KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] Back     alignment and domain information
>PTZ00112 origin recognition complex 1 protein; Provisional Back     alignment and domain information
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance Back     alignment and domain information
>PRK05342 clpX ATP-dependent protease ATP-binding subunit ClpX; Provisional Back     alignment and domain information
>COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function Back     alignment and domain information
>PLN02318 phosphoribulokinase/uridine kinase Back     alignment and domain information
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine Back     alignment and domain information
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional Back     alignment and domain information
>PF01580 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR002543 The FtsK/SpoIIIE domain is found extensively in a wide variety of proteins from prokaryotes and plasmids [] some of which contain up to three copies Back     alignment and domain information
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome Back     alignment and domain information
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin Back     alignment and domain information
>PRK14959 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK14950 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK14530 adenylate kinase; Provisional Back     alignment and domain information
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1095
2dfs_A1080 3-D Structure Of Myosin-V Inhibited State Length = 1e-171
3mnq_A788 Crystal Structure Of Myosin-2 Motor Domain In Compl 1e-165
1w9j_A770 Myosin Ii Dictyostelium Discoideum Motor Domain S45 1e-165
2xel_A776 Molecular Mechanism Of Pentachloropseudilin Mediate 1e-165
2jhr_A788 Crystal Structure Of Myosin-2 Motor Domain In Compl 1e-165
1jwy_A776 Crystal Structure Of The Dynamin A Gtpase Domain Co 1e-165
2aka_A776 Structure Of The Nucleotide-Free Myosin Ii Motor Do 1e-165
1w9i_A770 Myosin Ii Dictyostelium Discoideum Motor Domain S45 1e-165
2xo8_A776 Crystal Structure Of Myosin-2 In Complex With Tribr 1e-164
1g8x_A1010 Structure Of A Genetically Engineered Molecular Mot 1e-164
1yv3_A762 The Structural Basis Of Blebbistatin Inhibition And 1e-164
1w9l_A770 Myosin Ii Dictyostelium Discoideum Motor Domain S45 1e-164
1mma_A762 X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga 1e-164
1d0x_A761 Dictyostelium Myosin S1dc (Motor Domain Fragment) C 1e-164
3myh_X762 Insights Into The Importance Of Hydrogen Bonding In 1e-164
1w9k_A770 Dictyostelium Discoideum Myosin Ii Motor Domain S45 1e-164
2y0r_X758 Structural Basis For The Allosteric Interference Of 1e-164
1mmg_A762 X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga 1e-164
1fmv_A761 Crystal Structure Of The Apo Motor Domain Of Dictyo 1e-164
1oe9_A795 Crystal Structure Of Myosin V Motor With Essential 1e-164
1mmn_A762 X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga 1e-164
1mmd_A762 Truncated Head Of Myosin From Dictyostelium Discoid 1e-163
2y9e_X758 Structural Basis For The Allosteric Interference Of 1e-163
1lvk_A762 X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N 1e-163
1w8j_A766 Crystal Structure Of Myosin V Motor Domain - Nucleo 1e-159
1dfk_A830 Nucleotide-Free Scallop Myosin S1-Near Rigor State 1e-156
1dfl_A831 Scallop Myosin S1 Complexed With Mgadp:vanadate-Tra 1e-156
1b7t_A835 Myosin Digested By Papain Length = 835 1e-156
1qvi_A840 Crystal Structure Of Scallop Myosin S1 In The Pre-P 1e-156
1kk7_A837 Scallop Myosin In The Near Rigor Conformation Lengt 1e-156
2ec6_A838 Placopecten Striated Muscle Myosin Ii Length = 838 1e-154
2w4g_M840 Isometrically Contracting Insect Asynchronous Fligh 1e-153
2os8_A840 Rigor-Like Structures Of Muscle Myosins Reveal Key 1e-153
3mkd_A692 Crystal Structure Of Myosin-2 Dictyostelium Discoid 1e-153
2x9h_A695 Crystal Structure Of Myosin-2 Motor Domain In Compl 1e-152
1i84_S 1184 Cryo-Em Structure Of The Heavy Meromyosin Subfragme 1e-151
3dtp_B973 Tarantula Heavy Meromyosin Obtained By Flexible Doc 1e-150
3dtp_A971 Tarantula Heavy Meromyosin Obtained By Flexible Doc 1e-150
3j04_A909 Em Structure Of The Heavy Meromyosin Subfragment Of 1e-150
1br1_A820 Smooth Muscle Myosin Motor Domain-Essential Light C 1e-149
1br2_A791 Smooth Muscle Myosin Motor Domain Complexed With Mg 1e-146
4db1_A783 Cardiac Human Myosin S1dc, Beta Isoform Complexed W 1e-145
3i5g_A839 Crystal Structure Of Rigor-Like Squid Myosin S1 Len 1e-141
2mys_A843 Myosin Subfragment-1, Alpha Carbon Coordinates Only 1e-140
1m8q_A840 Molecular Models Of Averaged Rigor Crossbridges Fro 1e-140
2ycu_A995 Crystal Structure Of Human Non Muscle Myosin 2c In 1e-133
2x51_A789 M6 Delta Insert1 Length = 789 1e-127
2vas_A788 Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigo 1e-127
4dbq_A788 Myosin Vi D179y (md-insert2-cam, Delta-insert1) Pos 1e-127
3l9i_A814 Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant 1e-124
2bki_A858 Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal St 1e-123
2bkh_A814 Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc 1e-123
4e7z_A798 Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal F 1e-123
2v26_A784 Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) L 1e-123
4e7s_A798 Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke Stat 1e-123
4anj_A1052 Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke St 1e-123
4dbp_A814 Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal 1e-123
4dbr_A786 Myosin Vi D179y (md) Pre-powerstroke State Length = 1e-123
4a7f_C697 Structure Of The Actin-Tropomyosin-Myosin Complex ( 1e-121
1lkx_A697 Motor Domain Of Myoe, A Class-I Myosin Length = 697 1e-121
>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State Length = 1080 Back     alignment and structure 
Iteration: 1

 Score =  599 bits (1545), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 353/857 (41%), Positives = 505/857 (58%), Gaps = 53/857 (6%)
Query: 157 KKLRVWCRLEDGKWESGMI--QSTSGDEAFVL-LSNGNVVKV----STGELLPA-NPDIL 208
           K  RVW    +  W+S  +      GD+   L L  G  ++      T EL P  NPDIL
Sbjct: 9   KYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLDPKTKELPPLRNPDIL 68
Query: 209 EGVDDLIQLSYLNEPSVLNNIQYRY-SRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYR 267
            G +DL  LSYL+EP+VL+N++ R+    +IY+  G VL+A+NP++ +PIYG   I AY 
Sbjct: 69  VGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAYS 128
Query: 268 QKVMDS--PHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSE 325
            + M    PH++A+A+ AY +M  D  NQSII+SGESGAGKT +AK+AM+Y A + G + 
Sbjct: 129 GQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGSAS 188
Query: 326 --GIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSR 383
              +E ++L +N I+E+ GNAKT+RNDNSSRFGK IEI F    +I GA ++T+LLEKSR
Sbjct: 189 EANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSR 248
Query: 384 VVQLAAGERSYHIFYQLCAGA--PSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFH 441
           VV  A  ER+YHIFYQLCA A  P F  + L L  AN ++Y  Q     IDG+DDA+   
Sbjct: 249 VVFQAEEERNYHIFYQLCASAALPEF--KTLRLGNANYFHYTKQGGSPVIDGIDDAKEMV 306
Query: 442 NLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGC 501
           N  +A  ++ I    +   F +LA +L LGN+ F   D+++       + +T    LMG 
Sbjct: 307 NTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPPKHDPLTIFCDLMGV 366
Query: 502 SSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLE-V 560
             +E+   L   K+    ++  K ++   AI++RDALAK IY +LF+WIV+ +NK+L   
Sbjct: 367 DYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHST 426
Query: 561 GKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDW 620
            KQ +   I +LDIYGFE+F+ NSFEQFCINYANE+LQQ FN H+FKLEQEEY  + + W
Sbjct: 427 VKQHS--FIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPW 484
Query: 621 TRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKL-KQHLGSNSCFKGER- 678
           T ++F DN+ C+NLIE K +GVL LLDEE   PK +D T+A KL   HL   + F+  R 
Sbjct: 485 TLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRL 543
Query: 679 -GRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLL-SSCTCQVL-QLFXXXXXXXXXX 735
             +AF I+H+A +V Y   GFLEKN+D +  + I++L SS   ++L +LF          
Sbjct: 544 SNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPT 603
Query: 736 XXXXXXXXXLD----------------TQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIK 779
                    L                   K++VG +F+  L  LM  L  T PH++RCIK
Sbjct: 604 SATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIK 663
Query: 780 PNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLSQD 839
           PN  + P  ++E   +QQ R CGVLE +RIS +G+P+R  +QEF  RY VL+ +K +  D
Sbjct: 664 PNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLSD 723
Query: 840 PLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQ-AIIRLQKCFRGYQA 898
                  VL++  +  + YQ G TK++ R+GQ+A LE  R   L+ A IR+QK  RG+  
Sbjct: 724 RKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLM 783
Query: 899 RSRFRELCNGVITLQSFARGENTRRRHASLGKSCSAVVPE---------IRDEQLRE-II 948
           R ++  +    IT+Q + RG   R     L ++ +A++ +          R + +R+  I
Sbjct: 784 RKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATI 843
Query: 949 CLQSAIRGWLVRKQLKM 965
            LQ+ +RG+LVR + +M
Sbjct: 844 ALQALLRGYLVRNKYQM 860
>pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp- Metavanadate And Resveratrol Length = 788 Back     alignment and structure
>pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Alf4 Length = 770 Back     alignment and structure
>pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated Inhibition Of Myosin Motor Activity Length = 776 Back     alignment and structure
>pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentabromopseudilin Length = 788 Back     alignment and structure
>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed With Gdp, Determined As Myosin Fusion Length = 776 Back     alignment and structure
>pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain From Dictyostelium Discoideum Fused To The Gtpase Domain Of Dynamin 1 From Rattus Norvegicus Length = 776 Back     alignment and structure
>pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Befx Length = 770 Back     alignment and structure
>pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With Tribromodichloropseudilin Length = 776 Back     alignment and structure
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor Length = 1010 Back     alignment and structure
>pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And Specificity For Myosin Ii Length = 762 Back     alignment and structure
>pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e Bound With Mgadp-Alf4 Length = 770 Back     alignment and structure
>pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 Back     alignment and structure
>pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment) Complexed With M-Nitrophenyl Aminoethyldiphosphate Beryllium Trifluoride. Length = 761 Back     alignment and structure
>pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The Gamma- Phosphate Binding Pocket Of Myosin: Structural And Functional Studies Of Ser236 Length = 762 Back     alignment and structure
>pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With Bound Mgadp-Befx Length = 770 Back     alignment and structure
>pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 Back     alignment and structure
>pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 Back     alignment and structure
>pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of Dictyostellium Myosin Ii Length = 761 Back     alignment and structure
>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light Chain - Nucleotide-Free Length = 795 Back     alignment and structure
>pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 Back     alignment and structure
>pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum Complexed With Mgadp-Bef3 Length = 762 Back     alignment and structure
>pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 Back     alignment and structure
>pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N- Methylanthraniloyl) Nucleotide Bound To Dictyostelium Discoideum Myosin Motor Domain Length = 762 Back     alignment and structure
>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain - Nucleotide-Free Length = 766 Back     alignment and structure
>pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State Length = 830 Back     alignment and structure
>pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition State Length = 831 Back     alignment and structure
>pdb|1B7T|A Chain A, Myosin Digested By Papain Length = 835 Back     alignment and structure
>pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power Stroke State To 2.6 Angstrom Resolution: Flexibility And Function In The Head Length = 840 Back     alignment and structure
>pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation Length = 837 Back     alignment and structure
>pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii Length = 838 Back     alignment and structure
>pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key Mechanical Elements In The Transduction Pathways Of This Allosteric Motor Length = 840 Back     alignment and structure
>pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum Motor Domain S456y Mutant In Complex With Adp-Orthovanadate Length = 692 Back     alignment and structure
>pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentachlorocarbazole Length = 695 Back     alignment and structure
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of Chicken Gizzard Smooth Muscle Myosin With Regulatory Light Chain In The Dephosphorylated State. Only C Alphas Provided For Regulatory Light Chain. Only Backbone Atoms Provided For S2 Fragment. Length = 1184 Back     alignment and structure
>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 973 Back     alignment and structure
>pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 971 Back     alignment and structure
>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick Smooth Muscle Myosin With Regulatory Light Chain In Phosphorylated State Length = 909 Back     alignment and structure
>pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain Complex With Mgadp.Alf4 Bound At The Active Site Length = 820 Back     alignment and structure
>pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With Mgadp.Alf4 Length = 791 Back     alignment and structure
>pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With Mn-Amppnp Length = 783 Back     alignment and structure
>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1 Length = 839 Back     alignment and structure
>pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For The Two Light Chains Length = 843 Back     alignment and structure
>pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From Tomograms Of Insect Flight Muscle Length = 840 Back     alignment and structure
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In Pre-power Stroke State Length = 995 Back     alignment and structure
>pdb|2X51|A Chain A, M6 Delta Insert1 Length = 789 Back     alignment and structure
>pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State Length = 788 Back     alignment and structure
>pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor State Length = 788 Back     alignment and structure
>pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal Structure Length = 814 Back     alignment and structure
>pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure Length = 858 Back     alignment and structure
>pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 814 Back     alignment and structure
>pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form Length = 798 Back     alignment and structure
>pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) Length = 784 Back     alignment and structure
>pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State Length = 798 Back     alignment and structure
>pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State (Mg.Adp.Alf4) Length = 1052 Back     alignment and structure
>pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal Structure Length = 814 Back     alignment and structure
>pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State Length = 786 Back     alignment and structure
>pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor Atm 3) Length = 697 Back     alignment and structure
>pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin Length = 697 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1095
1g8x_A1010 Myosin II heavy chain fused to alpha-actinin 3; mo 0.0
2ycu_A995 Non muscle myosin 2C, alpha-actinin; motor protein 0.0
1w7j_A795 Myosin VA; motor protein, unconventional myosin, m 0.0
2v26_A784 Myosin VI; calmodulin-binding, nucleotide-binding, 0.0
1w9i_A770 Myosin II heavy chain; molecular motor, ATPase, mo 0.0
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 0.0
1kk8_A837 Myosin heavy chain, striated muscle; actin-detache 0.0
4db1_A783 Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb 0.0
1lkx_A697 Myosin IE heavy chain; myosin motor domain, lever 0.0
1i84_S 1184 Smooth muscle myosin heavy chain; muscle protein, 0.0
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 2e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-24
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
2ix7_C58 Myosin-5A; contractIle protein/metal binding, acti 4e-10
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010 Back     alignment and structure
 Score = 1123 bits (2908), Expect = 0.0
 Identities = 340/952 (35%), Positives = 512/952 (53%), Gaps = 50/952 (5%)

Query: 146  EWEDNLGYFIKKKLRVWCRL---EDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLP 202
               D     +  K  +W      E   +E G I S + D       +G   +V   +   
Sbjct: 20   GDSDLFKLTVSDKRYIWYNPDPDERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQ 79

Query: 203  ANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKF 262
             NP   +GV+D+ +LSYLNEP+V +N++ RY++D+IY+ +G  L+AVNPFK +PIY  + 
Sbjct: 80   RNPIKFDGVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEM 139

Query: 263  ITAYRQKVMD--SPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAAL 320
            +  ++ +  +  +PH++AI+D AY  M+ D  NQS++I+GESGAGKTE  K  +QYLA++
Sbjct: 140  VDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASV 199

Query: 321  GGGSEG-----IEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQ 375
             G ++      +E +ILQ N ILEAFGNAKT+RN+NSS FGK IEI F+  G I GA IQ
Sbjct: 200  AGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNSSEFGKFIEIQFNNAGFISGASIQ 259

Query: 376  TFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVD 435
            ++LLEKSRVV  +  ER+YHIFYQL AGA +  K+ L+L     +NYLNQS C+ I GV 
Sbjct: 260  SYLLEKSRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVS 319

Query: 436  DAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTA 495
            D   F    +A+DIV   +E++   F ++A +L LGNI F+    E  V      A+  A
Sbjct: 320  DEDEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLK-DKTALNAA 378

Query: 496  AMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQIN 555
            + + G +   L  AL   +I AG+D +A+ L ++++  SRDAL K +YG LF W+V++IN
Sbjct: 379  STVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKIN 438

Query: 556  KSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYEL 615
              L    +     I +LDI GFE FK NSFEQ CINY NE+LQQ FN H+FK+EQEEY  
Sbjct: 439  NVL--CSERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLK 496

Query: 616  DGVDWTRVEFE-DNEECLNLIE-KKPLGVLSLLDEESNFPKATDLTFANKL-KQHLGSNS 672
            + ++WT ++F  D++  ++LI+ ++P G+L+LLDE+S FP ATD T   KL       N+
Sbjct: 497  EKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNA 556

Query: 673  CFKGER--GRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVL-QLFASKM 729
             ++  R     F + HYAG+V Y+   +LEKN+DPLQ D+       +  V+ +LF    
Sbjct: 557  KYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPN 616

Query: 730  LKPSPKPAASSQPGALDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIY 789
            +    K  A+           +V  ++K QL  LM  LE T PHF+RCI PN+KQLP   
Sbjct: 617  IASRAKKGAN---------FITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKL 667

Query: 790  EEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQL-SQDPLSISVAVL 848
            E+ +VL Q RC GVLE +RI+R G+P R+ + +F  RY +L       ++D    + AVL
Sbjct: 668  EDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVL 727

Query: 849  QQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVL-QAIIRLQKCFRGY---------QA 898
            +  N+ PE Y+ G TK++ R+GQLA +E+ R+Q L     +     R           QA
Sbjct: 728  KHLNIDPEQYRFGITKIFFRAGQLARIEEAREQRLGSEQTKSDYLKRANELVQWINDKQA 787

Query: 899  RSRFRELCNGVITLQSFARGENTRRRHASLGKSCSAV---------VPEIRDEQLREIIC 949
                R+  + + ++QSF       ++     K                ++R  +    + 
Sbjct: 788  SLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVA 847

Query: 950  LQSAIRGWLVRKQLKMHKLKQSNPVNAKVKRRSGRKSSDMKDVPQEQVQALPTALAELQR 1009
                    +      + K +Q +    +++ +  +K + +       ++ L        +
Sbjct: 848  PAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKL--ENWATTK 905

Query: 1010 RVLKAEATLGQKEEENAALREQLQQYDAKWLEYEAKMKSMEEMWQKQMASLQ 1061
             V       G       A  + L+ +D +    E +  S       Q+  L 
Sbjct: 906  SVYLGSNETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILAQLTELN 957
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995 Back     alignment and structure
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A Length = 795 Back     alignment and structure
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* Length = 784 Back     alignment and structure
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ... Length = 770 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 Back     alignment and structure
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A* Length = 783 Back     alignment and structure
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9 Length = 697 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1095
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 100.0
1kk8_A837 Myosin heavy chain, striated muscle; actin-detache 100.0
1w7j_A795 Myosin VA; motor protein, unconventional myosin, m 100.0
4anj_A1052 Unconventional myosin-VI, green fluorescent prote; 100.0
1i84_S 1184 Smooth muscle myosin heavy chain; muscle protein, 100.0
4db1_A783 Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb 100.0
2ycu_A995 Non muscle myosin 2C, alpha-actinin; motor protein 100.0
1g8x_A1010 Myosin II heavy chain fused to alpha-actinin 3; mo 100.0
1w9i_A770 Myosin II heavy chain; molecular motor, ATPase, mo 100.0
2v26_A784 Myosin VI; calmodulin-binding, nucleotide-binding, 100.0
1lkx_A697 Myosin IE heavy chain; myosin motor domain, lever 100.0
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 99.23
2ix7_C58 Myosin-5A; contractIle protein/metal binding, acti 99.01
1n2d_C48 IQ2 and IQ3 motifs from MYO2P, A class V myosin; p 98.7
2ix7_C58 Myosin-5A; contractIle protein/metal binding, acti 98.68
1n2d_C48 IQ2 and IQ3 motifs from MYO2P, A class V myosin; p 98.61
1i84_S 1184 Smooth muscle myosin heavy chain; muscle protein, 98.56
1wdc_A64 Scallop myosin; calcium binding protein, muscle pr 97.32
2bl0_A63 Major plasmodial myosin heavy chain; muscle protei 97.28
1kk8_A837 Myosin heavy chain, striated muscle; actin-detache 97.2
1wdc_A64 Scallop myosin; calcium binding protein, muscle pr 97.19
2bl0_A63 Major plasmodial myosin heavy chain; muscle protei 96.99
3gn4_A148 Myosin-VI; unconventional myosin, motility, lever 96.94
1jbk_A195 CLPB protein; beta barrel, chaperone; 1.80A {Esche 95.05
2p65_A187 Hypothetical protein PF08_0063; CLPB, malaria, str 94.61
4eun_A200 Thermoresistant glucokinase; putative sugar kinase 93.48
3uie_A200 Adenylyl-sulfate kinase 1, chloroplastic; rossmann 93.39
3c8u_A208 Fructokinase; YP_612366.1, putative fructose trans 93.37
1ex7_A186 Guanylate kinase; substrate-induced FIT, domain mo 93.29
1kgd_A180 CASK, peripheral plasma membrane CASK; maguk, guan 92.73
3ec2_A180 DNA replication protein DNAC; helicase loader, rep 92.73
2w58_A202 DNAI, primosome component (helicase loader); ATP-b 92.52
3bos_A242 Putative DNA replication factor; P-loop containing 92.31
1lvg_A198 Guanylate kinase, GMP kinase; transferase; HET: AD 92.26
1qhx_A178 CPT, protein (chloramphenicol phosphotransferase); 92.2
3a00_A186 Guanylate kinase, GMP kinase; domain movement, dim 92.18
1zp6_A191 Hypothetical protein ATU3015; alpha-beta protein., 92.14
2eyu_A261 Twitching motility protein PILT; pilus retraction 91.97
2kxw_B27 Sodium channel protein type 2 subunit alpha; actio 91.95
2l53_B31 CAM, voltage-gated sodium channel type V alpha iso 91.68
2qor_A204 Guanylate kinase; phosphotransferase, purine metab 91.66
3tau_A208 Guanylate kinase, GMP kinase; structural genomics, 91.54
3tr0_A205 Guanylate kinase, GMP kinase; purines, pyrimidines 91.44
3kb2_A173 SPBC2 prophage-derived uncharacterized protein YOR 91.4
2kjq_A149 DNAA-related protein; solution structure, NESG, st 91.34
3t61_A202 Gluconokinase; PSI-biology, structural genomics, p 91.33
1zuh_A168 Shikimate kinase; alpha-beta protein, transferase; 91.26
3vaa_A199 Shikimate kinase, SK; structural genomics, center 91.18
2l53_B31 CAM, voltage-gated sodium channel type V alpha iso 91.13
1rz3_A201 Hypothetical protein rbstp0775; MCSG, structural g 91.13
1knq_A175 Gluconate kinase; ALFA/beta structure, transferase 90.91
1kht_A192 Adenylate kinase; phosphotransferase, signaling pr 90.87
1znw_A207 Guanylate kinase, GMP kinase; ATP:GMP-phosphotrans 90.77
2j41_A207 Guanylate kinase; GMP, GMK, transferase, ATP-bindi 90.74
3asz_A211 Uridine kinase; cytidine phosphorylation, transfer 90.66
1m7g_A211 Adenylylsulfate kinase; APS kinase, transferase, s 90.6
3iij_A180 Coilin-interacting nuclear ATPase protein; alpha a 90.53
2pez_A179 Bifunctional 3'-phosphoadenosine 5'- phosphosulfat 90.48
1s96_A219 Guanylate kinase, GMP kinase; E.coli, dimer, SAD, 90.48
2kxw_B27 Sodium channel protein type 2 subunit alpha; actio 90.46
1np6_A174 Molybdopterin-guanine dinucleotide biosynthesis pr 90.44
1odf_A290 YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser 90.35
3ney_A197 55 kDa erythrocyte membrane protein; structural ge 90.26
1gvn_B287 Zeta; postsegregational killing system, plasmid; 1 90.21
2rhm_A193 Putative kinase; P-loop containing nucleoside trip 90.08
1p9r_A418 General secretion pathway protein E; bacterial typ 90.06
1ye8_A178 Protein THEP1, hypothetical UPF0334 kinase-like pr 89.84
2chg_A226 Replication factor C small subunit; DNA-binding pr 89.81
1nks_A194 Adenylate kinase; thermophilic, transferase; HET: 89.76
1z6g_A218 Guanylate kinase; structural genomics, SGC, struct 89.73
1njg_A250 DNA polymerase III subunit gamma; rossman-like fol 89.71
1htw_A158 HI0065; nucleotide-binding fold, structural genomi 89.67
3jvv_A356 Twitching mobility protein; hexameric P-loop ATPas 89.65
1xjc_A169 MOBB protein homolog; structural genomics, midwest 89.52
3e70_C328 DPA, signal recognition particle receptor; FTSY, S 89.51
3cr8_A552 Sulfate adenylyltranferase, adenylylsulfate kinase 89.5
3lw7_A179 Adenylate kinase related protein (ADKA-like); AMP, 89.42
2f1r_A171 Molybdopterin-guanine dinucleotide biosynthesis pr 89.36
3trf_A185 Shikimate kinase, SK; amino acid biosynthesis, tra 89.34
3tqf_A181 HPR(Ser) kinase; transferase, hydrolase; 2.80A {Co 89.33
1kag_A173 SKI, shikimate kinase I; transferase, structural g 89.25
1l8q_A324 Chromosomal replication initiator protein DNAA; AA 89.18
2yvu_A186 Probable adenylyl-sulfate kinase; transferase, str 89.14
2bdt_A189 BH3686; alpha-beta protein, structural genomics, P 89.12
2z0h_A197 DTMP kinase, thymidylate kinase; ATP-binding, nucl 89.03
2bbw_A246 Adenylate kinase 4, AK4; nucleotide kinase, nucleo 89.01
3cm0_A186 Adenylate kinase; ATP-binding, cytoplasm, nucleoti 88.93
2jaq_A205 Deoxyguanosine kinase; transferase, deoxyribonucle 88.85
1gtv_A214 TMK, thymidylate kinase; transferase, transferase 88.79
4gp7_A171 Metallophosphoesterase; polynucleotide kinase phos 88.77
1e6c_A173 Shikimate kinase; phosphoryl transfer, ADP, shikim 88.77
2pt5_A168 Shikimate kinase, SK; aromatic amino acid biosynth 88.67
3aez_A312 Pantothenate kinase; transferase, homodimer, COA b 88.64
2ewv_A372 Twitching motility protein PILT; pilus retraction 88.55
1cke_A227 CK, MSSA, protein (cytidine monophosphate kinase); 88.53
1sq5_A308 Pantothenate kinase; P-loop, transferase; HET: PAU 88.49
1d2n_A272 N-ethylmaleimide-sensitive fusion protein; hexamer 88.44
3b9q_A302 Chloroplast SRP receptor homolog, alpha subunit CP 88.34
2iyv_A184 Shikimate kinase, SK; transferase, aromatic amino 88.25
1rj9_A304 FTSY, signal recognition protein; SRP-GTPase domai 88.16
3oja_B597 Anopheles plasmodium-responsive leucine-rich REPE 88.12
3lnc_A231 Guanylate kinase, GMP kinase; ALS collaborative cr 88.06
2vp4_A230 Deoxynucleoside kinase; ATP-binding, DNA synthesis 88.04
1via_A175 Shikimate kinase; structural genomics, transferase 87.98
1ly1_A181 Polynucleotide kinase; PNK, phosphatase, transfera 87.75
1fnn_A389 CDC6P, cell division control protein 6; ORC1, AAA 87.74
3fb4_A216 Adenylate kinase; psychrophIle, phosphotransferase 87.69
3n70_A145 Transport activator; sigma-54, ntpase, PSI, MCSG, 87.68
1qf9_A194 UMP/CMP kinase, protein (uridylmonophosphate/cytid 87.65
2qby_B384 CDC6 homolog 3, cell division control protein 6 ho 87.56
2jeo_A245 Uridine-cytidine kinase 1; UCK, transferase, ATP-b 87.38
2pbr_A195 DTMP kinase, thymidylate kinase; transferase, nucl 87.38
1svm_A377 Large T antigen; AAA+ fold, viral protein; HET: AT 87.33
2plr_A213 DTMP kinase, probable thymidylate kinase; TMP-bind 87.3
3tlx_A243 Adenylate kinase 2; structural genomics, structura 87.2
2w0m_A235 SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus 87.14
3te6_A318 Regulatory protein SIR3; heterochromatin, gene sil 87.1
4e22_A252 Cytidylate kinase; P-loop, CMP/ATP binding, transf 87.1
1m8p_A573 Sulfate adenylyltransferase; rossmann fold, phosph 87.05
1iqp_A327 RFCS; clamp loader, extended AAA-ATPase domain, co 87.02
2bwj_A199 Adenylate kinase 5; phosphoryl transfer reaction, 87.0
3ake_A208 Cytidylate kinase; CMP kinase, CMP complex, open c 87.0
1ofh_A310 ATP-dependent HSL protease ATP-binding subunit HSL 86.93
2og2_A359 Putative signal recognition particle receptor; nuc 86.8
2cdn_A201 Adenylate kinase; phosphoryl transfer, associative 86.76
2p5t_B253 PEZT; postsegregational killing system, phosphoryl 86.67
2wwf_A212 Thymidilate kinase, putative; transferase, malaria 86.64
1tev_A196 UMP-CMP kinase; ploop, NMP binding region, LID reg 86.63
2c95_A196 Adenylate kinase 1; transferase, AP4A, nucleotide 86.59
3a4m_A260 L-seryl-tRNA(SEC) kinase; P-loop motif, walker A m 86.59
2vli_A183 Antibiotic resistance protein; transferase, tunica 86.38
2gks_A546 Bifunctional SAT/APS kinase; transferase, sulfuryl 86.37
3dl0_A216 Adenylate kinase; phosphotransferase, zinc coordin 86.36
1zd8_A227 GTP:AMP phosphotransferase mitochondrial; ATP:AMP 86.35
1lv7_A257 FTSH; alpha/beta domain, four helix bundle, hydrol 86.34
2v9p_A305 Replication protein E1; AAA+ molecular motor, DNA 86.33
2qt1_A207 Nicotinamide riboside kinase 1; non-protein kinase 86.32
2gza_A361 Type IV secretion system protein VIRB11; ATPase, h 86.29
1uf9_A203 TT1252 protein; P-loop, nucleotide binding domain, 86.24
3vkg_A 3245 Dynein heavy chain, cytoplasmic; AAA+ protein, mol 86.15
1vma_A306 Cell division protein FTSY; TM0570, structural gen 86.13
1a7j_A290 Phosphoribulokinase; transferase, calvin cycle; 2. 86.12
2qz4_A262 Paraplegin; AAA+, SPG7, protease, ADP, structural 86.09
2yhs_A503 FTSY, cell division protein FTSY; cell cycle, prot 86.09
1zak_A222 Adenylate kinase; ATP:AMP-phosphotransferase, tran 85.98
3tif_A235 Uncharacterized ABC transporter ATP-binding prote; 85.91
2ehv_A251 Hypothetical protein PH0186; KAIC, RECA ATPase, un 85.85
3nwj_A250 ATSK2; P loop, shikimate, nucleoside monophosphate 85.8
2i3b_A189 HCR-ntpase, human cancer-related ntpase; AAA, ross 85.73
1nn5_A215 Similar to deoxythymidylate kinase (thymidylate K; 85.7
3oja_B597 Anopheles plasmodium-responsive leucine-rich REPE 85.69
4a74_A231 DNA repair and recombination protein RADA; hydrola 85.63
2z4s_A440 Chromosomal replication initiator protein DNAA; AA 85.47
1y63_A184 LMAJ004144AAA protein; structural genomics, protei 85.44
2v1u_A387 Cell division control protein 6 homolog; DNA repli 85.41
2qby_A386 CDC6 homolog 1, cell division control protein 6 ho 85.36
1g8f_A511 Sulfate adenylyltransferase; alpha-beta protein, b 85.32
1ukz_A203 Uridylate kinase; transferase; HET: ADP AMP; 1.90A 85.32
2v54_A204 DTMP kinase, thymidylate kinase; nucleotide biosyn 85.12
3syl_A309 Protein CBBX; photosynthesis, rubisco activase, AA 85.06
4fcw_A311 Chaperone protein CLPB; AAA domain; HET: ADP; 2.35 85.04
2ze6_A253 Isopentenyl transferase; crown GALL tumor, cytokin 84.85
3uk6_A368 RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding 84.66
1zu4_A320 FTSY; GTPase, signal recognition particle, SRP, re 84.66
3a7p_A152 Autophagy protein 16; coiled-coil, coiled coil, cy 84.56
3hnw_A138 Uncharacterized protein; coiled-coil, structural g 84.55
4edh_A213 DTMP kinase, thymidylate kinase; structural genomi 84.27
1nij_A318 Hypothetical protein YJIA; structural genomics, P- 84.22
1sxj_E354 Activator 1 40 kDa subunit; clamp loader, processi 84.22
1ixz_A254 ATP-dependent metalloprotease FTSH; AAA domain fol 84.21
1vht_A218 Dephospho-COA kinase; structural genomics, transfe 84.15
1r6b_X758 CLPA protein; AAA+, N-terminal domain, CLPS, cryst 84.1
1e4v_A214 Adenylate kinase; transferase(phosphotransferase); 84.03
2bjv_A265 PSP operon transcriptional activator; AAA, transcr 83.95
3r20_A233 Cytidylate kinase; structural genomics, seattle st 83.89
1jjv_A206 Dephospho-COA kinase; P-loop nucleotide-binding fo 83.84
3b9p_A297 CG5977-PA, isoform A; AAA ATPase, ATP-binding, nuc 83.83
2chq_A319 Replication factor C small subunit; DNA-binding pr 83.79
3pvs_A447 Replication-associated recombination protein A; ma 83.75
1sxj_C340 Activator 1 40 kDa subunit; clamp loader, processi 83.69
2fxo_A129 Myosin heavy chain, cardiac muscle beta isoform; c 83.64
2xb4_A223 Adenylate kinase; ATP-binding, nucleotide-binding, 83.58
1hqc_A324 RUVB; extended AAA-ATPase domain, complex with nuc 83.43
3co5_A143 Putative two-component system transcriptional RES 83.42
2oap_1511 GSPE-2, type II secretion system protein; hexameri 83.41
2if2_A204 Dephospho-COA kinase; alpha-beta protein, structur 83.33
1aky_A220 Adenylate kinase; ATP:AMP phosphotransferase, myok 83.25
2px0_A296 Flagellar biosynthesis protein FLHF; SRP GTPase, f 83.23
1jr3_A373 DNA polymerase III subunit gamma; processivity, pr 83.22
3b85_A208 Phosphate starvation-inducible protein; PHOH2, ATP 83.09
4eaq_A229 DTMP kinase, thymidylate kinase; structural genomi 83.04
2cbz_A237 Multidrug resistance-associated protein 1; ABC pro 83.01
2ff7_A247 Alpha-hemolysin translocation ATP-binding protein 82.9
1sxj_D353 Activator 1 41 kDa subunit; clamp loader, processi 82.81
4tmk_A213 Protein (thymidylate kinase); ATP:DTMP phosphotran 82.76
2ghi_A260 Transport protein; multidrug resistance protein, M 82.7
3tqc_A321 Pantothenate kinase; biosynthesis of cofactors, pr 82.65
1mv5_A243 LMRA, multidrug resistance ABC transporter ATP-bin 82.61
2onk_A240 Molybdate/tungstate ABC transporter, ATP-binding p 82.61
3h4m_A285 Proteasome-activating nucleotidase; ATPase, PAN, A 82.45
2d2e_A250 SUFC protein; ABC-ATPase, SUF protein, 310-helix, 82.41
3lv8_A236 DTMP kinase, thymidylate kinase; structural genomi 82.33
3ol1_A119 Vimentin; structural genomics, PSI-2, protein stru 82.24
2jee_A81 YIIU; FTSZ, septum, coiled-coil, cell division, ce 82.17
3cf0_A301 Transitional endoplasmic reticulum ATPase; AAA, P9 82.12
3v9p_A227 DTMP kinase, thymidylate kinase; ssgcid, STRU geno 82.09
1ko7_A314 HPR kinase/phosphatase; protein kinase, phosphotra 82.02
3gfo_A275 Cobalt import ATP-binding protein CBIO 1; structur 82.02
3llm_A235 ATP-dependent RNA helicase A; alpha-beta-alpha, st 82.01
2zu0_C267 Probable ATP-dependent transporter SUFC; iron-sulf 81.98
1uj2_A252 Uridine-cytidine kinase 2; alpha/beta mononucleoti 81.98
3pxg_A468 Negative regulator of genetic competence CLPC/MEC; 81.98
4g1u_C266 Hemin import ATP-binding protein HMUV; membrane tr 81.88
2ixe_A271 Antigen peptide transporter 1; ABC ATPase, hydrola 81.87
2qgz_A308 Helicase loader, putative primosome component; str 81.86
1iy2_A278 ATP-dependent metalloprotease FTSH; AAA domain fol 81.84
1b0u_A262 Histidine permease; ABC transporter, transport pro 81.77
1in4_A334 RUVB, holliday junction DNA helicase RUVB; AAA+-cl 81.75
1knx_A312 Probable HPR(Ser) kinase/phosphatase; HPR kinase, 81.6
2pcj_A224 ABC transporter, lipoprotein-releasing system ATP- 81.33
2olj_A263 Amino acid ABC transporter; ABC domain, ATPase, hy 81.24
2r62_A268 Cell division protease FTSH homolog; ATPase domain 81.07
3pfi_A338 Holliday junction ATP-dependent DNA helicase RUVB; 81.04
3kl4_A433 SRP54, signal recognition 54 kDa protein; signal r 81.02
3ld9_A223 DTMP kinase, thymidylate kinase; ssgcid, NIH, niai 80.97
3gn4_A148 Myosin-VI; unconventional myosin, motility, lever 80.96
3vkg_A 3245 Dynein heavy chain, cytoplasmic; AAA+ protein, mol 80.96
1cr0_A296 DNA primase/helicase; RECA-type protein fold, tran 80.8
3u61_B324 DNA polymerase accessory protein 44; AAA+, ATP hyd 80.71
2ga8_A359 Hypothetical 39.9 kDa protein; YFR007W, YFH7, unkn 80.68
3na7_A256 HP0958; flagellar biogenesis, flagellum export, C4 80.66
1sgw_A214 Putative ABC transporter; structural genomics, P p 80.66
1g6h_A257 High-affinity branched-chain amino acid transport 80.65
2pze_A229 Cystic fibrosis transmembrane conductance regulat; 80.58
2qmh_A205 HPR kinase/phosphorylase; V267F mutation, ATP-bind 80.57
3sop_A270 Neuronal-specific septin-3; hydrolase; HET: GDP; 2 80.56
1sxj_B323 Activator 1 37 kDa subunit; clamp loader, processi 80.49
2cvh_A220 DNA repair and recombination protein RADB; filamen 80.47
3foz_A316 TRNA delta(2)-isopentenylpyrophosphate transferas; 80.46
2pt7_A330 CAG-ALFA; ATPase, protein-protein complex, type IV 80.41
2yz2_A266 Putative ABC transporter ATP-binding protein TM_0; 80.38
1um8_A376 ATP-dependent CLP protease ATP-binding subunit CL; 80.24
1w5s_A412 Origin recognition complex subunit 2 ORC2; replica 80.14
1a5t_A334 Delta prime, HOLB; zinc finger, DNA replication; 2 80.13
1ls1_A295 Signal recognition particle protein; FFH, SRP54, S 80.12
1vpl_A256 ABC transporter, ATP-binding protein; TM0544, stru 80.09
2eqb_B97 RAB guanine nucleotide exchange factor SEC2; coile 80.09
3rlf_A381 Maltose/maltodextrin import ATP-binding protein M; 80.01
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Back     alignment and structure
Probab=100.00  E-value=1.4e-214  Score=2028.51  Aligned_cols=810  Identities=42%  Similarity=0.702  Sum_probs=738.7

Q ss_pred             ccCCcEEEEEcCCCCEEEEEEEEe---eCCeEEEEecCCeEEEEeC----CCccc-CCCCcccCcCCccccccCCchhHH
Q 001346          155 IKKKLRVWCRLEDGKWESGMIQST---SGDEAFVLLSNGNVVKVST----GELLP-ANPDILEGVDDLIQLSYLNEPSVL  226 (1095)
Q Consensus       155 ~~~~~~vW~~~~~~~~~~~~v~~~---~~~~~~v~~~~g~~~~v~~----~~~~~-~np~~~~~~~Dl~~L~~LnE~svL  226 (1095)
                      ..+|.+||+|+++++|.+|+|++.   +++.++|.+++|++++|+.    +++.| +||+.++++|||+.|++|||++||
T Consensus         7 ~~~g~~vwv~~~~~~~~~~~v~~~~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~~~~np~~~~~~~Dl~~L~~l~e~~vl   86 (1080)
T 2dfs_A            7 YTKYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLDPKTKELPPLRNPDILVGENDLTALSYLHEPAVL   86 (1080)
T ss_dssp             CCTTCEEEEEETTTEEEEEECSSCCCTTCSEEECCCSSSSCCEEECCTTTCCCCCBCCCGGGSSCSBSTTCSSCSHHHHH
T ss_pred             cccCCEEEEECCCCceEEEEEEeeecCCCceEEEEECCCCEEEEecCCcccccccccCcccccchhhhhhhhhcchHHHH
Confidence            345899999999999999999873   3446888888999888876    45777 699999999999999999999999


Q ss_pred             HHHHHHh-hcCccccccCCcEEEEcCCCCCCCCChHHHHHHcccCCC--CCchhHHHHHHHHHHhhCCCceEEEEcCCCC
Q 001346          227 NNIQYRY-SRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMD--SPHVYAIADTAYNEMMGDGVNQSIIISGESG  303 (1095)
Q Consensus       227 ~~L~~Ry-~~~~iYT~~G~iLiavNP~k~l~~Y~~~~~~~y~~~~~~--~PHiyavA~~Ay~~m~~~~~~QsIiisGESG  303 (1095)
                      |||+.|| .++.||||+|+||||||||+++|+|+++++..|+++...  ||||||||+.||++|+.+++|||||||||||
T Consensus        87 ~nL~~Ry~~~~~iYTy~G~iLiavNPyk~l~iy~~~~~~~Y~~~~~~~~pPHifaiA~~Ay~~m~~~~~~QsIiisGESG  166 (1080)
T 2dfs_A           87 HNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESG  166 (1080)
T ss_dssp             HHHHHHHHTTCCCEEEETTEEEEECCSSCCSCSSHHHHHHHTTCCGGGSCCCHHHHHHHHHHHHHHHTCCEEEEEECSTT
T ss_pred             HHHHHHHHhcCCchhccCceeEEecCCcccccCCHHHHHHhcCCCCCCCCCcHHHHHHHHHHHHHhcCCCcEEEEcCCCC
Confidence            9999999 999999999999999999999999999999999988654  8999999999999999999999999999999


Q ss_pred             CChhhHHHHHHHHHHHhcCCC--cchHHHHHhhhHHHHHhcccccCCCCCCCccccEEEEEEcCCCceeeeEeeeeeccc
Q 001346          304 AGKTETAKFAMQYLAALGGGS--EGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEK  381 (1095)
Q Consensus       304 AGKTe~~K~il~yLa~~~~~~--~~ie~~il~snpiLEAFGNAkT~rN~NSSRFGK~i~l~f~~~g~i~Ga~i~~yLLEk  381 (1095)
                      |||||++|+||+|||+++++.  ..|+++|+++||||||||||||++|||||||||||+|+||.+|.|+||+|.+|||||
T Consensus       167 AGKTe~~K~i~~yla~~~~~~~~~~ie~~il~snpiLEAFGNAkT~rN~NSSRFGK~i~i~F~~~g~i~Ga~i~~yLLEK  246 (1080)
T 2dfs_A          167 AGKTVSAKYAMRYFATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEK  246 (1080)
T ss_dssp             SSHHHHHHHHHHHHHHTTTCCTTTCTHHHHHHHHHHHHHHHEEEETTEEEEECSEEEEEEEECTTCCEEEEEEEEECCCC
T ss_pred             CCccchHHHHHHHHHhhccCCCccchHHHHHHHHHHHHHhcCCcCCCCCCccccceeEEEEECCCCCEeeecceeEeecC
Confidence            999999999999999998764  489999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCcccchhhhhcCCChhhHHhcCCCCCCCCCcccCCCccccCCcchHHHHHHHHHHHhhcCCCHHHHHHHH
Q 001346          382 SRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTF  461 (1095)
Q Consensus       382 sRVv~~~~gERnfHIFYqLl~G~~~~~~~~l~L~~~~~y~yL~~~~~~~~~~~dD~~~f~~l~~Al~~lG~~~~e~~~i~  461 (1095)
                      ||||.|++||||||||||||+|+++++++.|+|.++.+|+||++++|..++++||+++|..++.||++|||+++++.+||
T Consensus       247 sRVv~q~~~ERnfHIFYqllag~~~~~~~~l~L~~~~~y~yl~~~~~~~~~~~dD~~~f~~~~~A~~~lg~~~~e~~~i~  326 (1080)
T 2dfs_A          247 SRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGIDDAKEMVNTRQACTLLGISDSYQMGIF  326 (1080)
T ss_dssp             GGGTCCCTTCCSBHHHHHHHHTTTSSGGGGTCCCCTTTCTTTSTTSCCSCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred             ceeeccCCCCCcchhHHHHHcCCChHHHHHccCCCHHhcCcccCCCCCCCCCccHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCceEEEecCCCceee-cChHHHHHHHHhcCCCHHHHHHhHhhcEEeeCCceEEecCCHHHHHHHHHHHHH
Q 001346          462 AMLAAVLWLGNISFQVIDNENHVEV-IADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAK  540 (1095)
Q Consensus       462 ~iLaAILhLGni~F~~~~~~~~~~~-~~~~~l~~aa~LLgv~~~~L~~~L~~~~~~~~~e~i~~~l~~~qA~~~rDalak  540 (1095)
                      +|||||||||||+|...++ +.+.+ .+++.++.||.||||++++|.++||++++.+++|.+++++|++||.++||||||
T Consensus       327 ~ilaaILhLGni~F~~~~~-~~~~~~~~~~~l~~~a~LLgv~~~~L~~~l~~~~~~~~~e~i~~~~~~~qa~~~rdalak  405 (1080)
T 2dfs_A          327 RILAGILHLGNVEFASRDS-DSCAIPPKHDPLTIFCDLMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAK  405 (1080)
T ss_dssp             HHHHHHHHHTTCCCEEETT-TEEECCSSCHHHHHHHHHHTCCHHHHHHHHHEEEECC----EEEECCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhccCceEEecCC-cceeecCChHHHHHHHHHhCCCHHHHHHHhcccEEEeCCceEEeCCCHHHHHHHHHHHHH
Confidence            9999999999999987654 33444 678999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcccccccCCCCccceeEeecccCcccCCCCChhHHHhhhhhHHHHHHHHHhhhhhhHhhhhhcCCce
Q 001346          541 FIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDW  620 (1095)
Q Consensus       541 ~LY~~LF~wlV~~IN~~L~~~~~~~~~~IgILDi~GFE~f~~NsfEQLcINyaNEkLQ~~f~~~~F~~eq~eY~~EgI~~  620 (1095)
                      +||++||+|||.+||.+|.+.. ....+||||||||||+|+.|||||||||||||+|||+||+|+|+.||+||.+|||+|
T Consensus       406 ~lY~~LF~wlV~~iN~~l~~~~-~~~~~IgvLDI~GFE~f~~NsFEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w  484 (1080)
T 2dfs_A          406 HIYANLFNWIVDHVNKALHSTV-KQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPW  484 (1080)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCSS-CCCEEEEEEEECCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCT
T ss_pred             HHHHHHHHHHHHHHHHhhcccc-ccCceEEeeccCCccccCcCCHHHHHHHhhhHHHHHHHHHHhhHHHHHHHhhcCCcc
Confidence            9999999999999999998754 346899999999999999999999999999999999999999999999999999999


Q ss_pred             eeecccChHHHHHHHhcCCCccccccccccCCCCCChHHHHHHHHHHh-CCCCccccCC--CCCeEEeccCccccccccc
Q 001346          621 TRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQHL-GSNSCFKGER--GRAFSIRHYAGEVPYDTNG  697 (1095)
Q Consensus       621 ~~i~f~dN~~~ldLie~~p~Gll~lLDeE~~~p~~sd~~f~~kl~~~~-~~~~~f~~~~--~~~F~I~HyaG~V~Y~~~g  697 (1095)
                      +.|+|.||++|||||+++ .|||+||||||.+|++||.+|++||+++| ++|++|.+++  ..+|+|+||||+|+|+++|
T Consensus       485 ~~i~f~dn~~~idlie~~-~Gil~lLdee~~~p~~tD~~f~~kl~~~~~~~~~~f~~p~~~~~~F~I~HyAG~V~Y~~~g  563 (1080)
T 2dfs_A          485 TLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEYQCEG  563 (1080)
T ss_dssp             TCCCCCCCHHHHHHHHST-TSHHHHHHHHTTSTTCCHHHHHHHHHHHHBTTBSSEECCTTCSSEEEEECSSCEEEEECTT
T ss_pred             ccccccccHHHHHHHhcC-CceeeeccccccCCCCChHHHHHHHHHHhhcCCCCccCCCCCCCceEEEecceEEEEehhh
Confidence            999999999999999987 99999999999999999999999999988 9999998775  5799999999999999999


Q ss_pred             hhhhccCcchHHHHHHHhhc-hHHH-HHHhhcccCCCC---CC-------------CCCCCCCCCCCcCccchHHHHHHH
Q 001346          698 FLEKNRDPLQTDIIQLLSSC-TCQV-LQLFASKMLKPS---PK-------------PAASSQPGALDTQKQSVGTKFKGQ  759 (1095)
Q Consensus       698 fleKN~D~l~~d~~~ll~~S-~~~l-~~lf~~~~~~~~---~~-------------~~~~~~~~~~~~~~~tv~~~fk~q  759 (1095)
                      ||+||+|+|++|++++|++| ++++ ..+|.......+   ..             +..+...++...+++||+++|+.|
T Consensus       564 fleKN~D~l~~~~~~ll~~S~~~~~v~~lf~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~fk~s  643 (1080)
T 2dfs_A          564 FLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNS  643 (1080)
T ss_dssp             HHHHHBCCCCHHHHHHHHTCSSCSHHHHSCC-------------------------------------CCCBHHHHHHHH
T ss_pred             HHHhccccccHHHHHHHHcccccHHHHHHhcccccccccccccccccccccccccccccccccccccCCCCcHHHHHHHH
Confidence            99999999999999999999 8876 567764321110   00             000000012244578999999999


Q ss_pred             HHHHHHHHhccCCeeeEeccCCCCCCCcccchhHHHHhhhhhchhHHHHHHhhCCCcccchhhHHHhhhccccccccCCC
Q 001346          760 LFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLSQD  839 (1095)
Q Consensus       760 L~~L~~~L~~t~~hfIrCIkPN~~k~p~~fd~~~V~~QLr~~gvle~vri~r~Gyp~r~~~~eF~~RY~~L~~~~~~~~d  839 (1095)
                      |+.||++|++|+||||||||||+.+.|+.||..+|++||||+||||+|||+|.|||+|++|.+|+.||++|++......|
T Consensus       644 L~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~~~eF~~RY~~L~~~~~~~~d  723 (1080)
T 2dfs_A          644 LHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLSD  723 (1080)
T ss_dssp             HHHHHHHHHSSEEEEEEEECCCSSCCTTCCCHHHHHHHHHTTTHHHHHHHHTTSCCEEEEHHHHHHHHTTTSCGGGCCSS
T ss_pred             HHHHHHHHHhcCCeeEEEecCCCCCCchhcCHHhhHHHHhhcccHHHHhHHhcCCCchhhHHHHHHHHHHHCCccCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999987665558


Q ss_pred             hHHHHHHHHHhcCCCCcceeeceeeeeeccchhHHhhhhhhhHHH-HHHHHHHHHhhhhhhhhhhhhhhHHHHHHHHHHH
Q 001346          840 PLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQ-AIIRLQKCFRGYQARSRFRELCNGVITLQSFARG  918 (1095)
Q Consensus       840 ~~~~~~~iL~~~~l~~~~yqiGkTKVFLr~g~l~~LE~~R~~~l~-aai~IQa~~Rg~~aRr~y~~lr~aai~IQs~~Rg  918 (1095)
                      ++..|+.||..++++++.|++|+||||||.+.+..||+.|...+. +|+.||++||||++|++|++++.+++.||++|||
T Consensus       724 ~k~~~~~il~~~~~~~~~~~~G~TKVF~r~g~l~~LE~~R~~~l~~aa~~IQa~~Rg~l~Rk~~~~~r~aai~IQ~~~Rg  803 (1080)
T 2dfs_A          724 RKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRG  803 (1080)
T ss_dssp             HHHHHHHHHTTTSCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHhcCChhhheeccccchhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999987765 7899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhh-hhccchhhH---------HhhhHHHHHHHHHHHHHHHHHHHH-HHH
Q 001346          919 ENTRRRHASLGKS-CSAVVPEIR---------DEQLREIICLQSAIRGWLVRKQLK-MHK  967 (1095)
Q Consensus       919 ~~aRr~y~~lr~~-AA~~IQ~~~---------~~~~~Aai~IQs~~Rg~laRr~~~-l~~  967 (1095)
                      +++|+.|..+++. ||++||++|         ...+.+++.||++|||+++|+.++ ++.
T Consensus       804 ~~aR~~~~~lr~~~AAi~IQs~~Rg~~~Rk~y~~lr~aai~IQs~~Rg~laRr~~~~lr~  863 (1080)
T 2dfs_A          804 HQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLR  863 (1080)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhcccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999888766 899999988         345677888888888888888777 543
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Back     alignment and structure
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A Back     alignment and structure
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa} Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Back     alignment and structure
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A* Back     alignment and structure
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Back     alignment and structure
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Back     alignment and structure
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ... Back     alignment and structure
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* Back     alignment and structure
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Back     alignment and structure
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Back     alignment and structure
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Back     alignment and structure
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Back     alignment and structure
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A Back     alignment and structure
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Back     alignment and structure
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Back     alignment and structure
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A Back     alignment and structure
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Back     alignment and structure
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa} Back     alignment and structure
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20 Back     alignment and structure
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum} Back     alignment and structure
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP} Back     alignment and structure
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A* Back     alignment and structure
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP} Back     alignment and structure
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A Back     alignment and structure
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1 Back     alignment and structure
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A* Back     alignment and structure
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426} Back     alignment and structure
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A Back     alignment and structure
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1 Back     alignment and structure
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A* Back     alignment and structure
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25 Back     alignment and structure
>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus} Back     alignment and structure
>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus} Back     alignment and structure
>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens} Back     alignment and structure
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax} Back     alignment and structure
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes} Back     alignment and structure
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii} Back     alignment and structure
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A* Back     alignment and structure
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B} Back     alignment and structure
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti} Back     alignment and structure
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A* Back     alignment and structure
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens} Back     alignment and structure
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6 Back     alignment and structure
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A* Back     alignment and structure
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A Back     alignment and structure
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A Back     alignment and structure
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus} Back     alignment and structure
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A* Back     alignment and structure
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A* Back     alignment and structure
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A Back     alignment and structure
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A* Back     alignment and structure
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A* Back     alignment and structure
>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus} Back     alignment and structure
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A Back     alignment and structure
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6 Back     alignment and structure
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0 Back     alignment and structure
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B* Back     alignment and structure
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus} Back     alignment and structure
>1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A* Back     alignment and structure
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11 Back     alignment and structure
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus} Back     alignment and structure
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1 Back     alignment and structure
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum} Back     alignment and structure
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A* Back     alignment and structure
>1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A Back     alignment and structure
>3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A* Back     alignment and structure
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10 Back     alignment and structure
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B* Back     alignment and structure
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans} Back     alignment and structure
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A Back     alignment and structure
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus} Back     alignment and structure
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii} Back     alignment and structure
>3tqf_A HPR(Ser) kinase; transferase, hydrolase; 2.80A {Coxiella burnetii} Back     alignment and structure
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2 Back     alignment and structure
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A* Back     alignment and structure
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix} Back     alignment and structure
>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25 Back     alignment and structure
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A Back     alignment and structure
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus} Back     alignment and structure
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A* Back     alignment and structure
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A* Back     alignment and structure
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A* Back     alignment and structure
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A* Back     alignment and structure
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus} Back     alignment and structure
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A* Back     alignment and structure
>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A* Back     alignment and structure
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A* Back     alignment and structure
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A* Back     alignment and structure
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A* Back     alignment and structure
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana} Back     alignment and structure
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A* Back     alignment and structure
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D* Back     alignment and structure
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Back     alignment and structure
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum} Back     alignment and structure
>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} SCOP: c.37.1.1 PDB: 1j90_A* 2jj8_A* 2vp2_A* 1oe0_A* 2vp5_A* 2vp6_A* 2vp9_A* 2vpp_A* 2vqs_A* 2vp0_A* 1ot3_A* 2jcs_A* 1zm7_A* 1zmx_A* Back     alignment and structure
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2 Back     alignment and structure
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1 Back     alignment and structure
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20 Back     alignment and structure
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus} Back     alignment and structure
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli} Back     alignment and structure
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A* Back     alignment and structure
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus} Back     alignment and structure
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A* Back     alignment and structure
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus} Back     alignment and structure
>1svm_A Large T antigen; AAA+ fold, viral protein; HET: ATP; 1.94A {Simian virus 40} SCOP: c.37.1.20 PDB: 1svl_A* 1svo_A 1n25_A 2h1l_A Back     alignment and structure
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii} Back     alignment and structure
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum} Back     alignment and structure
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2} Back     alignment and structure
>3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis} Back     alignment and structure
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A* Back     alignment and structure
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens} Back     alignment and structure
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A* Back     alignment and structure
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A* Back     alignment and structure
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana} Back     alignment and structure
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A Back     alignment and structure
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae} Back     alignment and structure
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A* Back     alignment and structure
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1 Back     alignment and structure
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A Back     alignment and structure
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A* Back     alignment and structure
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans} Back     alignment and structure
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus} Back     alignment and structure
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A* Back     alignment and structure
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A* Back     alignment and structure
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20 Back     alignment and structure
>2v9p_A Replication protein E1; AAA+ molecular motor, DNA replication, DNA translocation, nucleotide-binding, DNA-binding; 3.00A {Bovine papillomavirus type 1} PDB: 2gxa_A* Back     alignment and structure
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A* Back     alignment and structure
>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis} Back     alignment and structure
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1 Back     alignment and structure
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* Back     alignment and structure
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10 Back     alignment and structure
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6 Back     alignment and structure
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens} Back     alignment and structure
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A Back     alignment and structure
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1 Back     alignment and structure
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A* Back     alignment and structure
>3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana} Back     alignment and structure
>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11 Back     alignment and structure
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A* Back     alignment and structure
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Back     alignment and structure
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A* Back     alignment and structure
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A* Back     alignment and structure
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1 Back     alignment and structure
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix} Back     alignment and structure
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus} Back     alignment and structure
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A* Back     alignment and structure
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A* Back     alignment and structure
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A* Back     alignment and structure
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A* Back     alignment and structure
>4fcw_A Chaperone protein CLPB; AAA domain; HET: ADP; 2.35A {Thermus thermophilus} PDB: 4fcv_A* 4fd2_A* 4fct_A* Back     alignment and structure
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A Back     alignment and structure
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D* Back     alignment and structure
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A Back     alignment and structure
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens} Back     alignment and structure
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A* Back     alignment and structure
>1nij_A Hypothetical protein YJIA; structural genomics, P-loop protein, GTP binding, structure function project, S2F, unknown function; 2.00A {Escherichia coli} SCOP: c.37.1.10 d.237.1.1 Back     alignment and structure
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A* Back     alignment and structure
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A Back     alignment and structure
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X* Back     alignment and structure
>1e4v_A Adenylate kinase; transferase(phosphotransferase); HET: AP5; 1.85A {Escherichia coli} SCOP: c.37.1.1 g.41.2.1 PDB: 1e4y_A* 1ake_A* 1ank_A* 2eck_A* 3hpq_A* 4ake_A 3hpr_A* Back     alignment and structure
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A* Back     alignment and structure
>3r20_A Cytidylate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ADP, DCMP, D transferase; 2.00A {Mycobacterium smegmatis} SCOP: c.37.1.0 PDB: 3r8c_A 4die_A* Back     alignment and structure
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1 Back     alignment and structure
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster} Back     alignment and structure
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A Back     alignment and structure
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli} Back     alignment and structure
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A Back     alignment and structure
>2xb4_A Adenylate kinase; ATP-binding, nucleotide-binding, transferase; HET: SRT; 1.80A {Desulfovibrio gigas} PDB: 3l0s_A* 3l0p_A* Back     alignment and structure
>1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C* Back     alignment and structure
>3co5_A Putative two-component system transcriptional RES regulator; structural genomics, APC89341.1; 2.40A {Neisseria gonorrhoeae} Back     alignment and structure
>2oap_1 GSPE-2, type II secretion system protein; hexameric ATPase, hydrolase; HET: ANP; 2.95A {Archaeoglobus fulgidus} PDB: 2oaq_1 Back     alignment and structure
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus} Back     alignment and structure
>1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A* Back     alignment and structure
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A* Back     alignment and structure
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B* Back     alignment and structure
>3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, ST genomics, PSI-2, protein structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A Back     alignment and structure
>2cbz_A Multidrug resistance-associated protein 1; ABC proteins, MRP1/ABCC1, nucleotide-binding domain, ATP- binding, hydrolysis, transport; HET: ATP; 1.5A {Homo sapiens} Back     alignment and structure
>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A* Back     alignment and structure
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A* Back     alignment and structure
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str} Back     alignment and structure
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii} Back     alignment and structure
>1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} SCOP: c.37.1.12 Back     alignment and structure
>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12 Back     alignment and structure
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii} Back     alignment and structure
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A* Back     alignment and structure
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A* Back     alignment and structure
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli} Back     alignment and structure
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus} Back     alignment and structure
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis} Back     alignment and structure
>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} SCOP: c.98.2.1 c.91.1.2 Back     alignment and structure
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124} Back     alignment and structure
>3llm_A ATP-dependent RNA helicase A; alpha-beta-alpha, structural genomics, structural genomics consortium, SGC, activator, ATP-binding, DNA-binding; HET: ADP; 2.80A {Homo sapiens} Back     alignment and structure
>2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A Back     alignment and structure
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A* Back     alignment and structure
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis} Back     alignment and structure
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis} Back     alignment and structure
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A* Back     alignment and structure
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3} Back     alignment and structure
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20 Back     alignment and structure
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12 Back     alignment and structure
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A* Back     alignment and structure
>1knx_A Probable HPR(Ser) kinase/phosphatase; HPR kinase, HPR kinase/phosphatase, HPRK/P, P-loop, walker A BOX, catabolite repression; 2.50A {Mycoplasma pneumoniae} SCOP: c.98.2.1 c.91.1.2 Back     alignment and structure
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A Back     alignment and structure
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J* Back     alignment and structure
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A* Back     alignment and structure
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp} Back     alignment and structure
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A Back     alignment and structure
>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis} Back     alignment and structure
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa} Back     alignment and structure
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* Back     alignment and structure
>1cr0_A DNA primase/helicase; RECA-type protein fold, transferase; HET: DNA; 2.30A {Enterobacteria phage T7} SCOP: c.37.1.11 PDB: 1cr1_A* 1cr2_A* 1cr4_A* 1e0j_A* 1e0k_A* Back     alignment and structure
>3u61_B DNA polymerase accessory protein 44; AAA+, ATP hydrolase, clamp loader, sliding clamp, primer-TEM DNA, DNA binding protein-DNA complex; HET: DNA ADP 08T; 3.20A {Enterobacteria phage T4} PDB: 3u5z_B* 3u60_B* Back     alignment and structure
>2ga8_A Hypothetical 39.9 kDa protein; YFR007W, YFH7, unknown function; HET: CME; 1.77A {Saccharomyces cerevisiae} PDB: 2gaa_A* Back     alignment and structure
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori} Back     alignment and structure
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12 Back     alignment and structure
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A* Back     alignment and structure
>2pze_A Cystic fibrosis transmembrane conductance regulat; NBD, ABC transporter, CFTR, hydrolase; HET: ATP; 1.70A {Homo sapiens} PDB: 2pzg_A* 2pzf_A* 1ckx_A 1cky_A 1ckw_A 1ckz_A Back     alignment and structure
>2qmh_A HPR kinase/phosphorylase; V267F mutation, ATP-binding, carbohydrate metabolism, magnesium, metal-binding, multifunctional enzyme; 2.60A {Lactobacillus casei} PDB: 1jb1_A 1kkl_A 1kkm_A* Back     alignment and structure
>3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens} Back     alignment and structure
>1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A* Back     alignment and structure
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A Back     alignment and structure
>2pt7_A CAG-ALFA; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori} SCOP: c.37.1.11 PDB: 1nly_A* 1nlz_A 1opx_A* 1g6o_A Back     alignment and structure
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima} Back     alignment and structure
>1um8_A ATP-dependent CLP protease ATP-binding subunit CL; CLPP binding loop, chaperone; HET: ADP; 2.60A {Helicobacter pylori} SCOP: c.37.1.20 Back     alignment and structure
>1w5s_A Origin recognition complex subunit 2 ORC2; replication, CDC6, DNA replication initiation, DNA BIND protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A* Back     alignment and structure
>1a5t_A Delta prime, HOLB; zinc finger, DNA replication; 2.20A {Escherichia coli K12} SCOP: a.80.1.1 c.37.1.20 PDB: 1jr3_E* 1xxh_E* 1xxi_E* 3glf_E* 3glg_E* 3glh_E* 3gli_E* Back     alignment and structure
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A* Back     alignment and structure
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12 Back     alignment and structure
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1 Back     alignment and structure
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1095
d1kk8a2789 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain 0.0
d2mysa2794 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain 0.0
d1w7ja2730 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chick 0.0
d1br2a2710 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chick 0.0
d1d0xa2712 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain 0.0
d1lkxa_684 c.37.1.9 (A:) Myosin S1, motor domain {Dictyosteli 0.0
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score =  743 bits (1920), Expect = 0.0
 Identities = 288/775 (37%), Positives = 433/775 (55%), Gaps = 35/775 (4%)

Query: 180 GDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIY 239
            D  F  L+      +        NP   E ++D+  ++YLNE SVL N++ RY+  +IY
Sbjct: 6   SDPDFQYLAVDRKKLMKEQTAAFMNPPKFEKLEDMANMTYLNEASVLYNLRSRYTSGLIY 65

Query: 240 SKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDS--PHVYAIADTAYNEMMGDGVNQSII 297
           + +G   IAVNP++ +PIY +  I  YR K      PH++++AD AY  M+ D  NQS +
Sbjct: 66  TYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCL 125

Query: 298 ISGESGAGKTETAKFAMQYLAALGGGSEG------------IEYEILQTNHILEAFGNAK 345
           I+GESGAGKTE  K  + YLA +    +             +E +I+Q N +LEA+GNAK
Sbjct: 126 ITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEGSLEDQIIQANPVLEAYGNAK 185

Query: 346 TSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAP 405
           T+RN+NSSRFGK I IHF   GKI GA I+T+LLEKSRV    + ER+YHIFYQ+C+ A 
Sbjct: 186 TTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICSNAI 245

Query: 406 SFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLA 465
             L + + +   +         CLT+D +DD + F    EA DI+   KE+++  F   A
Sbjct: 246 PELNDVMLVTPDSGLYSFINQGCLTVDNIDDVEEFKLCDEAFDILGFTKEEKQSMFKCTA 305

Query: 466 AVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKK 525
           ++L +G + F+    E   E          A L G ++ +L+ AL   K++ G + + K 
Sbjct: 306 SILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTKG 365

Query: 526 LTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSF 585
             + Q ++S  ALAK +Y  +F+W+V ++NK+L+   +     I +LDI GFE F  NSF
Sbjct: 366 QNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRN-YYIGVLDIAGFEIFDFNSF 424

Query: 586 EQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSL 645
           EQ CINY NERLQQ FN H+F LEQEEY+ +G+ W  ++F  + +    + +KP+G+LS+
Sbjct: 425 EQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEKPMGILSI 484

Query: 646 LDEESNFPKATDLTFANKL-KQHLGSNSCF--------KGERGRAFSIRHYAGEVPYDTN 696
           L+EE  FPKA D +F +KL + H+G N  F          +    F + HYAG VPY   
Sbjct: 485 LEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSIT 544

Query: 697 GFLEKNRDPLQTDIIQLLSSCTCQVL-QLFASKMLKPSPKPAASSQPGALDTQKQSVGTK 755
           G+LEKN+DP+  +++ LL +    ++ +LF +    P        +     +  Q++   
Sbjct: 545 GWLEKNKDPINENVVALLGASKEPLVAELFKA----PEEPAGGGKKKKGKSSAFQTISAV 600

Query: 756 FKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYP 815
            +  L KLM  L +T PHF+RCI PN  + PG+ + +LVL Q +C GVLE +RI R G+P
Sbjct: 601 HRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFP 660

Query: 816 TRMRHQEFAGRYGVLLSE--KQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLA 873
           +R+ + EF  RY +L      Q   D  ++S  +L    + P  Y++G TK++ ++G L 
Sbjct: 661 SRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLG 720

Query: 874 ALEDRRKQVL-QAIIRLQKCFRGYQARSRFRELCN---GVITLQSFARGENTRRR 924
            LE+ R + L + I   Q   RGY  R  +++L +   G+  +Q   R     R 
Sbjct: 721 NLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN 775
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 Back     information, alignment and structure
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Length = 730 Back     information, alignment and structure
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 710 Back     information, alignment and structure
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Length = 712 Back     information, alignment and structure
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Length = 684 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1095
d2mysa2794 Myosin S1, motor domain {Chicken (Gallus gallus), 100.0
d1kk8a2789 Myosin S1, motor domain {Bay scallop (Aequipecten 100.0
d1d0xa2712 Myosin S1, motor domain {Dictyostelium discoideum 100.0
d1w7ja2730 Myosin S1, motor domain {Chicken (Gallus gallus), 100.0
d1br2a2710 Myosin S1, motor domain {Chicken (Gallus gallus), 100.0
d1lkxa_684 Myosin S1, motor domain {Dictyostelium discoideum, 100.0
d1br2a146 Myosin S1 fragment, N-terminal domain {Chicken (Ga 98.09
d2mysa146 Myosin S1 fragment, N-terminal domain {Chicken (Ga 97.91
d1kk8a148 Myosin S1 fragment, N-terminal domain {Bay scallop 97.77
d2mysa2794 Myosin S1, motor domain {Chicken (Gallus gallus), 97.45
d1kk8a2789 Myosin S1, motor domain {Bay scallop (Aequipecten 97.38
d1w7ja158 Myosin S1 fragment, N-terminal domain {Chicken (Ga 96.83
d1np6a_170 Molybdopterin-guanine dinucleotide biosynthesis pr 94.84
d1m8pa3183 ATP sulfurylase C-terminal domain {Fungus (Penicil 94.76
d1m7ga_208 Adenosine-5'phosphosulfate kinase (APS kinase) {Fu 94.68
d1iqpa2231 Replication factor C {Archaeon Pyrococcus furiosus 94.37
d1qhxa_178 Chloramphenicol phosphotransferase {Streptomyces v 93.98
d1rkba_173 Adenylate kinase {Human (Homo sapiens), isoenzyme 93.94
d1kaga_169 Shikimate kinase (AroK) {Escherichia coli [TaxId: 93.94
d1ly1a_152 Polynucleotide kinase, kinase domain {Bacteriophag 93.7
d1sxjd2237 Replication factor C2 {Baker's yeast (Saccharomyce 93.64
d2i3ba1189 Cancer-related NTPase, C1orf57 {Human (Homo sapien 93.6
d1ye8a1178 Hypothetical kinase-like protein Aq_1292 {Aquifex 93.5
d1knqa_171 Gluconate kinase {Escherichia coli [TaxId: 562]} 93.49
d1khta_190 Adenylate kinase {Archaeon Methanococcus voltae [T 93.23
d1qf9a_194 UMP/CMP kinase {Dictyostelium discoideum [TaxId: 4 93.16
d2bdta1176 Hypothetical protein BH3686 {Bacillus halodurans [ 92.9
d1x6va3195 Adenosine-5'phosphosulfate kinase (APS kinase) {Hu 92.86
d1rz3a_198 Hypothetical protein rbstp0775 {Bacillus stearothe 92.71
d1lw7a2192 Transcriptional regulator NadR, ribosylnicotinamid 92.61
d1lvga_190 Guanylate kinase {Mouse (Mus musculus) [TaxId: 100 92.59
d1y63a_174 Probable kinase LmjF30.1890 {Leishmania major [Tax 92.12
d1gkya_186 Guanylate kinase {Baker's yeast (Saccharomyces cer 92.1
d1xjca_165 Molybdopterin-guanine dinucleotide biosynthesis pr 91.99
d1znwa1182 Guanylate kinase {Mycobacterium tuberculosis [TaxI 91.86
d1nksa_194 Adenylate kinase {Archaeon Sulfolobus acidocaldari 91.72
d1e6ca_170 Shikimate kinase (AroK) {Erwinia chrysanthemi [Tax 91.44
d1sxjc2227 Replication factor C3 {Baker's yeast (Saccharomyce 91.33
d1zp6a1176 Hypothetical protein Atu3015 {Agrobacterium tumefa 90.96
d1kgda_178 Guanylate kinase-like domain of Cask {Human (Homo 90.9
d1zaka1189 Adenylate kinase {Maize (Zea mays) [TaxId: 4577]} 90.84
d1njfa_239 delta prime subunit of DNA polymerase III, N-domai 90.82
d1w5sa2287 CDC6-like protein APE0152, N-terminal domain {Aero 90.74
d1g6oa_323 Hexameric traffic ATPase, HP0525 {Helicobacter pyl 90.73
d1viaa_161 Shikimate kinase (AroK) {Campylobacter jejuni [Tax 90.67
d1fnna2276 CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T 90.34
d1in4a2238 Holliday junction helicase RuvB {Thermotoga mariti 90.04
d1s96a_205 Guanylate kinase {Escherichia coli [TaxId: 562]} 90.0
d1bifa1213 6-phosphofructo-2-kinase/fructose-2,6-bisphosphata 89.94
d1sxjb2224 Replication factor C4 {Baker's yeast (Saccharomyce 89.83
d1zina1182 Adenylate kinase {Bacillus stearothermophilus [Tax 89.68
d1uj2a_213 Uridine-cytidine kinase 2 {Human (Homo sapiens) [T 89.66
d1a5ta2207 delta prime subunit of DNA polymerase III, N-domai 89.66
d2cdna1181 Adenylate kinase {Mycobacterium tuberculosis [TaxI 89.36
d1ukza_196 Uridylate kinase {Baker's yeast (Saccharomyces cer 89.3
d1um8a_364 ClpX {Helicobacter pylori [TaxId: 210]} 89.24
d1ofha_309 HslU {Haemophilus influenzae [TaxId: 727]} 89.15
d1q3ta_223 CMP kinase {Streptococcus pneumoniae [TaxId: 1313] 89.09
d2iyva1165 Shikimate kinase (AroK) {Mycobacterium tuberculosi 88.89
d1teva_194 UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606] 88.6
d1ckea_225 CMP kinase {Escherichia coli [TaxId: 562]} 88.21
d1s3ga1182 Adenylate kinase {Bacillus globisporus [TaxId: 145 88.0
d2pmka1241 Haemolysin B ATP-binding protein {Escherichia coli 87.88
d1e4va1179 Adenylate kinase {Escherichia coli [TaxId: 562]} 87.8
d1knxa2177 HPr kinase HprK C-terminal domain {Mycoplasma pneu 87.58
d1kkma_176 HPr kinase HprK C-terminal domain {Lactobacillus c 87.52
d1ko7a2169 HPr kinase HprK C-terminal domain {Staphylococcus 87.49
d3b60a1253 Multidrug resistance ABC transporter MsbA, C-termi 87.37
d1yj5a2172 5' polynucleotide kinase-3' phosphatase, C-termina 87.2
d1l8qa2213 Chromosomal replication initiation factor DnaA {Aq 87.07
d1jj7a_251 Peptide transporter Tap1, C-terminal ABC domain {H 87.05
d1mv5a_242 Multidrug resistance ABC transporter LmrA, C-termi 87.05
d1sxja2253 Replication factor C1 {Baker's yeast (Saccharomyce 86.92
d1gsia_208 Thymidylate kinase {Mycobacterium tuberculosis [Ta 86.64
d1yksa1140 YFV helicase domain {Yellow fever virus [TaxId: 11 86.64
d2vp4a1197 Deoxyribonucleoside kinase {Fruit fly (Drosophila 86.23
d1yrba1244 ATP(GTP)-binding protein PAB0955 {Pyrococcus abyss 86.05
d1ak2a1190 Adenylate kinase {Cow (Bos taurus), mitochondrial 85.78
d1nn5a_209 Thymidylate kinase {Human (Homo sapiens) [TaxId: 9 85.78
d1v43a3239 Hypothetical protein PH0022, N-terminal domain {Py 85.77
d1gvnb_273 Plasmid maintenance system epsilon/zeta, toxin zet 85.71
d2gnoa2198 gamma subunit of DNA polymerase III, N-domain {The 85.52
d3adka_194 Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]} 85.22
d1l2ta_230 MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 84.83
d1akya1180 Adenylate kinase {Baker's yeast (Saccharomyces cer 84.38
d1sxje2252 Replication factor C5 {Baker's yeast (Saccharomyce 84.29
d1r0wa_281 Cystic fibrosis transmembrane conductance regulato 84.21
d1g2912240 Maltose transport protein MalK, N-terminal domain 84.1
d3dhwc1240 Methionine import ATP-binding protein MetN {Escher 83.92
d1d2na_246 Hexamerization domain of N-ethylmalemide-sensitive 83.34
d2hyda1255 Putative multidrug export ATP-binding/permease pro 83.29
d4tmka_210 Thymidylate kinase {Escherichia coli [TaxId: 562]} 83.26
d2fnaa2283 Archaeal ATPase SSO1545 {Sulfolobus solfataricus [ 83.04
d2awna2232 Maltose transport protein MalK, N-terminal domain 82.99
d2onka1240 Molybdate/tungstate import ATP-binding protein Wtp 82.92
d1b0ua_258 ATP-binding subunit of the histidine permease {Sal 82.74
d2ak3a1189 Adenylate kinase {Cow (Bos taurus), mitochondrial 82.69
d1sq5a_308 Pantothenate kinase PanK {Escherichia coli [TaxId: 82.61
d1p9ra_401 Extracellular secretion NTPase EpsE {Vibrio choler 82.51
d1a7ja_288 Phosphoribulokinase {Rhodobacter sphaeroides [TaxI 82.28
d1sgwa_200 Putative ABC transporter PF0895 {Pyrococcus furios 82.08
d1vhta_208 Dephospho-CoA kinase {Escherichia coli [TaxId: 562 82.06
d1ixsb2239 Holliday junction helicase RuvB {Thermus thermophi 81.88
d1uf9a_191 Dephospho-CoA kinase {Thermus thermophilus [TaxId: 81.84
d3d31a2229 Sulfate/molybdate ABC transporter, ATP-binding pro 81.71
d1w7ja2730 Myosin S1, motor domain {Chicken (Gallus gallus), 81.41
d1n0wa_242 DNA repair protein Rad51, catalytic domain {Human 80.52
d1ry6a_330 Kinesin {Malaria parasite (Plasmodium falciparum) 80.13
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=100.00  E-value=1.1e-186  Score=1728.79  Aligned_cols=728  Identities=39%  Similarity=0.632  Sum_probs=660.8

Q ss_pred             CCcccCCCCcccCcCCccccccCCchhHHHHHHHHhhcCccccccCCcEEEEcCCCCCCCCChHHHHHHcccCCC--CCc
Q 001346          198 GELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMD--SPH  275 (1095)
Q Consensus       198 ~~~~~~np~~~~~~~Dl~~L~~LnE~svL~~L~~Ry~~~~iYT~~G~iLiavNP~k~l~~Y~~~~~~~y~~~~~~--~PH  275 (1095)
                      ....++||+.+++||||++|++|||++|||+|+.||.+|+||||+|+||||||||+++|+|+++++..|+++...  |||
T Consensus        26 ~~~~~~np~~~d~veDl~~L~~lnE~~vL~~L~~Ry~~~~iYT~~G~iLiavNPyk~l~ly~~~~~~~y~~~~~~~~pPH  105 (794)
T d2mysa2          26 NKPFDMNPPKYDKIEDMAMMTHLHEPAVLYNLKERYAAWMIYTYSGLFCVTVNPYKWLPVYNPKVVLAYRGKKRQEAPPH  105 (794)
T ss_dssp             SSCCCCCCTTSSSCSBGGGCSCCCHHHHHHHHHHTTTTTCCEEECSSCEEEECCSSCCGGGCTTHHHHTTTCCTTSSCSC
T ss_pred             cCCCCCCCccccCcchhcCCCCCCHHHHHHHHHHHHcCCCceeeECCEEEEECCCCCCCCCCHHHHHHHcCCCCCCCCCc
Confidence            345789999999999999999999999999999999999999999999999999999999999999999987655  899


Q ss_pred             hhHHHHHHHHHHhhCCCceEEEEcCCCCCChhhHHHHHHHHHHHhcCCC------------cchHHHHHhhhHHHHHhcc
Q 001346          276 VYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGS------------EGIEYEILQTNHILEAFGN  343 (1095)
Q Consensus       276 iyavA~~Ay~~m~~~~~~QsIiisGESGAGKTe~~K~il~yLa~~~~~~------------~~ie~~il~snpiLEAFGN  343 (1095)
                      ||+||++||+.|+.+++||||||||||||||||++|+||+||+++++++            ..|+++|+++|||||||||
T Consensus       106 ifaiA~~Ay~~m~~~~~~QsIiisGeSGaGKTe~~K~il~yL~~~~~~~~~~~~~~~~~~~~~i~~~i~~~npiLEAFGN  185 (794)
T d2mysa2         106 IFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFATIAASGEKKKEEQSGKMQGTLEDQIISANPLLEAFGN  185 (794)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEEEECTTSCHHHHHHHHHHHHHHHTCCCC-----------CCHHHHHHHHHHHHHHHHE
T ss_pred             HHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHHHHHHcCCCCCccccccccccCcHHHHHHHhhhHHHHhcC
Confidence            9999999999999999999999999999999999999999999987532            3699999999999999999


Q ss_pred             cccCCCCCCCccccEEEEEEcCCCceeeeEeeeeeccccccccccCCCCcccchhhhhcCCChhhHHhcCCC-CCCCCCc
Q 001346          344 AKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLK-VANDYNY  422 (1095)
Q Consensus       344 AkT~rN~NSSRFGK~i~l~f~~~g~i~Ga~i~~yLLEksRVv~~~~gERnfHIFYqLl~G~~~~~~~~l~L~-~~~~y~y  422 (1095)
                      |||++|+||||||||++|+||.+|+|+||+|++|||||||||.|++||||||||||||+|+++++++.|+|. ++.+|+|
T Consensus       186 AkT~~N~NSSRFgk~~~l~f~~~g~i~ga~i~~ylLEksRv~~~~~gErnfHIFYqll~g~~~~~~~~~~l~~~~~~y~y  265 (794)
T d2mysa2         186 AKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVTFQLPAERSYHIFYQIMSNKKPELIDMLLITTNPYDYHY  265 (794)
T ss_dssp             ECCSSCSSEECSEEEEEEEECSSSSEEECCEEEECCCGGGGTCCCTTCCCBHHHHHHTTCSSHHHHHHHTCCSCGGGCGG
T ss_pred             CcccccCChhhhheeeeeEECCCCCEeeEEEEEEecCCceEEecCcccccHHHHHHHHcCCCHHHHHHhccCCCHHHhhh
Confidence            999999999999999999999999999999999999999999999999999999999999999999999994 6899999


Q ss_pred             ccCCCccccCCcchHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHhcCceEEEecCCCceeecChHHHHHHHHhcCCC
Q 001346          423 LNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCS  502 (1095)
Q Consensus       423 L~~~~~~~~~~~dD~~~f~~l~~Al~~lG~~~~e~~~i~~iLaAILhLGni~F~~~~~~~~~~~~~~~~l~~aa~LLgv~  502 (1095)
                      |+++. ..++++||+++|..++.||+.|||+++++..||+|||||||||||+|...++++.+.+.+.+.++.||.||||+
T Consensus       266 l~~~~-~~~~~~~d~~~f~~~~~al~~lg~s~~e~~~i~~ilaaILhLGni~f~~~~~~~~~~~~~~~~~~~~a~LLgi~  344 (794)
T d2mysa2         266 VSEGE-ITVPSIDDQEELMATDSAIDILGFSADEKTAIYKLTGAVMHYGNLKFKQKQREEQAEPDGTEVADKAAYLMGLN  344 (794)
T ss_dssp             GCSSC-CCCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEECTTSCCEEESCSSHHHHHHHHHTCC
T ss_pred             cCCCC-cccCCCChHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccceeEeecCCcccccccchHHHHHHHHHhCCC
Confidence            99975 47899999999999999999999999999999999999999999999988777788999999999999999999


Q ss_pred             HHHHHHhHhhcEEeeCCceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCccceeEeecccCcccCCC
Q 001346          503 SDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKK  582 (1095)
Q Consensus       503 ~~~L~~~L~~~~~~~~~e~i~~~l~~~qA~~~rDalak~LY~~LF~wlV~~IN~~L~~~~~~~~~~IgILDi~GFE~f~~  582 (1095)
                      +++|.++|+++.+.++++.+++++++++|.++||+|||+||++||+|||.+||.++.++. ....+||||||||||+|+.
T Consensus       345 ~~~L~~~L~~~~~~~~~e~i~~~l~~~~a~~~rdalaK~LY~~LF~wiV~~IN~~l~~~~-~~~~~IgILDifGFE~f~~  423 (794)
T d2mysa2         345 SAELLKALCYPRVGVGNEAVTKGETVSEVHNSVGALAKAVYEKMFLWMVIRINQQLDTKQ-PRQYFIGVLDIAGFEIFDF  423 (794)
T ss_dssp             HHHHHHHHHSCBCCCSSSCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSS-CCCEEEEEEEEECCCCCSS
T ss_pred             HHHhhccceeeEEEecccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCC-CcceEEEEeeccccccccc
Confidence            999999999999999999999999999999999999999999999999999999998754 3467999999999999999


Q ss_pred             CChhHHHhhhhhHHHHHHHHHhhhhhhHhhhhhcCCceeeecccChHHHHHHHhcCCCccccccccccCCCCCChHHHHH
Q 001346          583 NSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFAN  662 (1095)
Q Consensus       583 NsfEQLcINyaNEkLQ~~f~~~~F~~eq~eY~~EgI~~~~i~f~dN~~~ldLie~~p~Gll~lLDeE~~~p~~sd~~f~~  662 (1095)
                      |||||||||||||+||++|++++|+.||++|.+|||+|..|+|.||..++++|..+|.|||++|||||.+|++||.+|++
T Consensus       424 NsfEQLcINyaNEkLQq~f~~~~F~~Eq~~Y~~EgI~~~~i~~~~n~~~~~~l~~kp~Gil~lLdee~~~~~~td~~f~~  503 (794)
T d2mysa2         424 NSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLAACIELIEKPMGIFSILEEECMFPKATDTSFKN  503 (794)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCSTHHHHHHHHHHHSTTSHHHHHHHHTTCTTCCHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCCHHHHHHHHhCcccHHHHHHHhccCccccHHHHHH
Confidence            99999999999999999999999999999999999999999999888888888888999999999999999999999999


Q ss_pred             HHHHHh-CCCCccccC------CCCCeEEeccCccccccccchhhhccCcchHHHHHHHhhchHHH-HHHhhcccCCCCC
Q 001346          663 KLKQHL-GSNSCFKGE------RGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQV-LQLFASKMLKPSP  734 (1095)
Q Consensus       663 kl~~~~-~~~~~f~~~------~~~~F~I~HyaG~V~Y~~~gfleKN~D~l~~d~~~ll~~S~~~l-~~lf~~~~~~~~~  734 (1095)
                      ||++++ ++++.|..+      .+..|+|+||||+|+|+++||++||+|.++++++++|++|++++ ..+|+........
T Consensus       504 kl~~~~~~~~~~~~~~~~~~~~~~~~F~I~HyaG~V~Y~v~gfleKN~D~l~~~~~~ll~~S~~~~i~~lf~~~~~~~~~  583 (794)
T d2mysa2         504 KLYDEHLGKSNNFQKPKPAKGKAEAHFSLVHYAGTVDYNISGWLEKNKDPLNETVIGLYQKSSVKTLALLFATYGGEAEG  583 (794)
T ss_dssp             HHHHHHBTTBSSEECCCCC---CCCSEEEECSSCEEEECCSSHHHHHHCCCCHHHHHHHHTCSSHHHHHHTSCC------
T ss_pred             HHHHHhcCCCccccCCCccCCCCCCceEEEeeCceeeehhcchHHhccCcccHHHHHHHHhCCCHHHHHhhhhccccccc
Confidence            998655 566777543      24689999999999999999999999999999999999999885 5678654321111


Q ss_pred             CCCCCCCCCCCCcCccchHHHHHHHHHHHHHHHhccCCeeeEeccCCCCCCCcccchhHHHHhhhhhchhHHHHHHhhCC
Q 001346          735 KPAASSQPGALDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGY  814 (1095)
Q Consensus       735 ~~~~~~~~~~~~~~~~tv~~~fk~qL~~L~~~L~~t~~hfIrCIkPN~~k~p~~fd~~~V~~QLr~~gvle~vri~r~Gy  814 (1095)
                      ... ..........+.||+++|+.||+.||++|++|+||||||||||..+.|+.||..+|++||||+||||+|||+|.||
T Consensus       584 ~~~-~~~~~~~~~~~~Tv~~~fr~sL~~L~~~L~~t~~hFIRCIKPN~~k~p~~Fd~~~V~~QLr~~GvLE~vri~r~Gy  662 (794)
T d2mysa2         584 GGG-KKGGKKKGSSFQTVSALFRENLNKLMANLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICRKGF  662 (794)
T ss_dssp             ---------------CCSHHHHHHHHHHHHHHHHTSEEEEEEEECCCTTCCTTCCCHHHHHHHHHHHSHHHHHHHHTTSC
T ss_pred             ccC-CcCCCCCCCccccHHHHHHHHHHHHHHHHhcCCCeEEEeecCCcccCCcccchHHHHHHHHhcCHHHHHHHHhcCC
Confidence            000 0000111334579999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccchhhHHHhhhcccccccc---CCChHHHHHHHHHhcCCCCcceeeceeeeeeccchhHHhhhhhhhHHH-HHHHHH
Q 001346          815 PTRMRHQEFAGRYGVLLSEKQL---SQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQ-AIIRLQ  890 (1095)
Q Consensus       815 p~r~~~~eF~~RY~~L~~~~~~---~~d~~~~~~~iL~~~~l~~~~yqiGkTKVFLr~g~l~~LE~~R~~~l~-aai~IQ  890 (1095)
                      |+|++|.+|++||++|++....   ..|++..|+.||+.+++++.+|++|+||||||.+.+..||.+|...+. +++.||
T Consensus       663 p~R~~~~eF~~RY~~L~~~~~~~~~~~d~~~~~~~ll~~~~~~~~~~~iGkTKVFlr~~~~~~LE~~r~~~l~~~~~~IQ  742 (794)
T d2mysa2         663 PSRVLYADFKQRYRVLNASAIPEGQFMDSKKASEKLLGGGDVDHTQYAFGHTKVFFKAGLLGLLEEMRDDKLAEIITATQ  742 (794)
T ss_dssp             CCEEEHHHHHHHHGGGTTTC------CCTTHHHHHHTTSSSCCSSSEEEETTEEEECTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CccccHHHHHHHHHHhCcccccccccCCHHHHHHHHHHhcCCCcccEEeCCCeEEeCccHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999987643   457889999999999999999999999999999999999999987764 678999


Q ss_pred             HHHhhhhhhhhhhhh---hhHHHHHHHHHHHHHHHHHHHHH
Q 001346          891 KCFRGYQARSRFREL---CNGVITLQSFARGENTRRRHASL  928 (1095)
Q Consensus       891 a~~Rg~~aRr~y~~l---r~aai~IQs~~Rg~~aRr~y~~l  928 (1095)
                      ++||||++|++|+++   +.+++.||++|||+++||.|..+
T Consensus       743 ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~~~~  783 (794)
T d2mysa2         743 ARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHWPWM  783 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence            999999999999776   55677777777777777665433
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Back     information, alignment and structure
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Back     information, alignment and structure
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Back     information, alignment and structure
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Back     information, alignment and structure
>d1br2a1 b.34.3.1 (A:34-79) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Back     information, alignment and structure
>d2mysa1 b.34.3.1 (A:34-79) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Back     information, alignment and structure
>d1kk8a1 b.34.3.1 (A:29-76) Myosin S1 fragment, N-terminal domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Back     information, alignment and structure
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Back     information, alignment and structure
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Back     information, alignment and structure
>d1w7ja1 b.34.3.1 (A:5-62) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Back     information, alignment and structure
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]} Back     information, alignment and structure
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]} Back     information, alignment and structure
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]} Back     information, alignment and structure
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]} Back     information, alignment and structure
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]} Back     information, alignment and structure
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]} Back     information, alignment and structure
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]} Back     information, alignment and structure
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]} Back     information, alignment and structure
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]} Back     information, alignment and structure
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]} Back     information, alignment and structure
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]} Back     information, alignment and structure
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]} Back     information, alignment and structure
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]} Back     information, alignment and structure
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]} Back     information, alignment and structure
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} Back     information, alignment and structure
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} Back     information, alignment and structure
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]} Back     information, alignment and structure
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]} Back     information, alignment and structure
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Back     information, alignment and structure
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure