Citrus Sinensis ID: 001399
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1085 | 2.2.26 [Sep-21-2011] | |||||||
| O48946 | 1081 | Cellulose synthase A cata | yes | no | 0.993 | 0.997 | 0.877 | 0.0 | |
| Q6AT26 | 1076 | Probable cellulose syntha | yes | no | 0.985 | 0.993 | 0.845 | 0.0 | |
| A2Y0X2 | 1076 | Probable cellulose syntha | N/A | no | 0.985 | 0.993 | 0.845 | 0.0 | |
| Q9SKJ5 | 1065 | Probable cellulose syntha | no | no | 0.963 | 0.981 | 0.816 | 0.0 | |
| Q941L0 | 1065 | Cellulose synthase A cata | no | no | 0.967 | 0.985 | 0.719 | 0.0 | |
| Q84ZN6 | 1081 | Probable cellulose syntha | no | no | 0.956 | 0.960 | 0.718 | 0.0 | |
| Q84M43 | 1073 | Probable cellulose syntha | no | no | 0.950 | 0.960 | 0.718 | 0.0 | |
| A2XN66 | 1073 | Probable cellulose syntha | N/A | no | 0.950 | 0.960 | 0.718 | 0.0 | |
| Q69V23 | 1093 | Probable cellulose syntha | no | no | 0.988 | 0.981 | 0.683 | 0.0 | |
| Q851L8 | 1092 | Probable cellulose syntha | no | no | 0.986 | 0.979 | 0.680 | 0.0 |
| >sp|O48946|CESA1_ARATH Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1 | Back alignment and function desciption |
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Score = 1951 bits (5054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 952/1085 (87%), Positives = 1025/1085 (94%), Gaps = 7/1085 (0%)
Query: 1 MEANAGMVAGSHRRNELVRIRHDSDSGPKPLKNLNGQTCQICGDNVGLTAMGDIFVACNE 60
MEA+AG+VAGS+RRNELVRIRH+SD G KPLKN+NGQ CQICGD+VGL GD+FVACNE
Sbjct: 1 MEASAGLVAGSYRRNELVRIRHESDGGTKPLKNMNGQICQICGDDVGLAETGDVFVACNE 60
Query: 61 CAFPVCRPCYEYERKDGTQSCPQCKTRYKRHKGSPRVEGDDEEDDIDDLENEFNYAQGNS 120
CAFPVCRPCYEYERKDGTQ CPQCKTR++RH+GSPRVEGD++EDD+DD+ENEFNYAQG +
Sbjct: 61 CAFPVCRPCYEYERKDGTQCCPQCKTRFRRHRGSPRVEGDEDEDDVDDIENEFNYAQGAN 120
Query: 121 KARRQWQGEDLELSASSRHESQQPIPLLTNGQSVSGEIPCATPDTQSVRTTSGPLGPSER 180
KAR Q GE E S+SSRHESQ PIPLLT+G +VSGEI TPDTQSVRTTSGPLGPS+R
Sbjct: 121 KARHQRHGE--EFSSSSRHESQ-PIPLLTHGHTVSGEI--RTPDTQSVRTTSGPLGPSDR 175
Query: 181 NVHSSPYTDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQEKNMMQVTGKYSEG 240
N SSPY DPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQEKNM+Q+TGKY EG
Sbjct: 176 NAISSPYIDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQEKNMLQMTGKYHEG 235
Query: 241 KG-DIEGTGSNGEELQMADDARQPLSRVVPIPSSHLTPYRVVIILRLIILGFFLQYRVTH 299
KG +IEGTGSNGEELQMADD R P+SRVVPIPSS LTPYRVVIILRLIIL FFLQYR TH
Sbjct: 236 KGGEIEGTGSNGEELQMADDTRLPMSRVVPIPSSRLTPYRVVIILRLIILCFFLQYRTTH 295
Query: 300 PVKDAYPLWLTSVICEIWFALSWLLDQFPKWYPVNRETYLDRLALRYDREGEPSQLAPVD 359
PVK+AYPLWLTSVICEIWFA SWLLDQFPKWYP+NRETYLDRLA+RYDR+GEPSQL PVD
Sbjct: 296 PVKNAYPLWLTSVICEIWFAFSWLLDQFPKWYPINRETYLDRLAIRYDRDGEPSQLVPVD 355
Query: 360 IFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKW 419
+FVSTVDPLKEPPLVTANTVLSIL+VDYPVDKV+CYVSDDGSAMLTFE+LSETAEFA+KW
Sbjct: 356 VFVSTVDPLKEPPLVTANTVLSILSVDYPVDKVACYVSDDGSAMLTFESLSETAEFAKKW 415
Query: 420 VPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQK 479
VPFCKK NIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQK
Sbjct: 416 VPFCKKFNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQK 475
Query: 480 MPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGRSGGLDTDGNELPRLVYVSREKRPGFQHH 539
+PEEGWTMQDGTPWPGNN RDHPGMIQVFLG SGGLDTDGNELPRL+YVSREKRPGFQHH
Sbjct: 476 IPEEGWTMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDTDGNELPRLIYVSREKRPGFQHH 535
Query: 540 KKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPAYGKKTCYVQFPQ 599
KKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKA+KEAMCFMMDPA GKK CYVQFPQ
Sbjct: 536 KKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKAIKEAMCFMMDPAIGKKCCYVQFPQ 595
Query: 600 RFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEP 659
RFDGIDLHDRYANRNIVFFDIN+KGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEP
Sbjct: 596 RFDGIDLHDRYANRNIVFFDINMKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEP 655
Query: 660 NIIVKGCCGPRKKGKGSNKKYIDKKRAMKRTESTVPIFNMEDIEEGVEGYDDERSLLMSQ 719
NIIVK CCG RKKGK S K +K+R + R++S P+FNMEDI+EG EGYDDERS+LMSQ
Sbjct: 656 NIIVKSCCGSRKKGKSSKKYNYEKRRGINRSDSNAPLFNMEDIDEGFEGYDDERSILMSQ 715
Query: 720 KSLEKRFGQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYG 779
+S+EKRFGQSPVFIAATFMEQGGIPPTTNPA+LLKEAIHVISCGYEDKTEWGKEIGWIYG
Sbjct: 716 RSVEKRFGQSPVFIAATFMEQGGIPPTTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYG 775
Query: 780 SVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHC 839
SVTEDILTGFKMHARGWISIYC PPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHC
Sbjct: 776 SVTEDILTGFKMHARGWISIYCNPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHC 835
Query: 840 PIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWF 899
PIWYGY+GRL+LLER+AYINTIVYP+TSIPLIAYC LPAFCL+T++FIIPEISN+AS+WF
Sbjct: 836 PIWYGYHGRLRLLERIAYINTIVYPITSIPLIAYCILPAFCLITDRFIIPEISNYASIWF 895
Query: 900 ILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFT 959
ILLFISI TGILE+RWSGV IEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFT
Sbjct: 896 ILLFISIAVTGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFT 955
Query: 960 VTSKASDDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKL 1019
VTSKA+D+DGDFAELY+FKWT+LLIPPTTVL+VNL+GIVAGVS+A+NSGYQSWGPLFGKL
Sbjct: 956 VTSKATDEDGDFAELYIFKWTALLIPPTTVLLVNLIGIVAGVSYAVNSGYQSWGPLFGKL 1015
Query: 1020 FFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANS-N 1078
FFA+WVIAHLYPFLKGLLGRQNRTPTIVIVWS+LLASIFSLLWVR++PF + AN+ N
Sbjct: 1016 FFALWVIAHLYPFLKGLLGRQNRTPTIVIVWSVLLASIFSLLWVRINPFVDANPNANNFN 1075
Query: 1079 GQCGI 1083
G+ G+
Sbjct: 1076 GKGGV 1080
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Catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation. Involved in the primary cell wall formation. Required during embryogenesis for cell elongation, orientation of cell expansion and complex cell wall formations, such as interdigitated pattern of epidermal pavement cells, stomatal guard cells and trichomes. Plays a role in lateral roots formation, but seems not necessary for the development of tip-growing cells such as root hairs. The presence of each protein CESA1 and CESA6 is critical for cell expansion after germination. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 2 |
| >sp|Q6AT26|CESA1_ORYSJ Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1 | Back alignment and function description |
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| >sp|A2Y0X2|CESA1_ORYSI Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9SKJ5|CESAA_ARATH Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q941L0|CESA3_ARATH Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q84ZN6|CESA8_ORYSJ Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q84M43|CESA2_ORYSJ Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1 | Back alignment and function description |
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| >sp|A2XN66|CESA2_ORYSI Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q69V23|CESA3_ORYSJ Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q851L8|CESA5_ORYSJ Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1 | Back alignment and function description |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1085 | ||||||
| TAIR|locus:2127776 | 1081 | CESA1 "cellulose synthase 1" [ | 0.993 | 0.997 | 0.848 | 0.0 | |
| TAIR|locus:2040080 | 1065 | CESA10 "cellulose synthase 10" | 0.973 | 0.991 | 0.786 | 0.0 | |
| TAIR|locus:2156789 | 1065 | CEV1 "CONSTITUTIVE EXPRESSION | 0.966 | 0.984 | 0.708 | 0.0 | |
| TAIR|locus:2136308 | 1084 | CESA2 "cellulose synthase A2" | 0.988 | 0.989 | 0.634 | 0.0 | |
| TAIR|locus:2178193 | 1069 | CESA5 "cellulose synthase 5" [ | 0.980 | 0.995 | 0.640 | 0.0 | |
| TAIR|locus:2176090 | 1084 | CESA6 "cellulose synthase 6" [ | 0.984 | 0.985 | 0.635 | 0.0 | |
| TAIR|locus:2052576 | 1088 | CESA9 "cellulose synthase A9" | 0.986 | 0.983 | 0.628 | 0.0 | |
| TAIR|locus:2124167 | 985 | IRX1 "IRREGULAR XYLEM 1" [Arab | 0.842 | 0.927 | 0.654 | 0.0 | |
| TAIR|locus:2172457 | 1049 | CESA4 "cellulose synthase A4" | 0.405 | 0.419 | 0.718 | 0.0 | |
| TAIR|locus:2178935 | 1026 | IRX3 "IRREGULAR XYLEM 3" [Arab | 0.388 | 0.410 | 0.720 | 0.0 |
| TAIR|locus:2127776 CESA1 "cellulose synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4978 (1757.4 bits), Expect = 0., P = 0.
Identities = 921/1085 (84%), Positives = 990/1085 (91%)
Query: 1 MEANAGMVAGSHRRNELVRIRHDSDSGPKPLKNLNGQTCQICGDNVGLTAMGDIFVACNE 60
MEA+AG+VAGS+RRNELVRIRH+SD G KPLKN+NGQ CQICGD+VGL GD+FVACNE
Sbjct: 1 MEASAGLVAGSYRRNELVRIRHESDGGTKPLKNMNGQICQICGDDVGLAETGDVFVACNE 60
Query: 61 CAFPVCRPCYEYERKDGTQSCPQCKTRYKRHKGSPRVXXXXXXXXXXXXXXXFNYAQGNS 120
CAFPVCRPCYEYERKDGTQ CPQCKTR++RH+GSPRV FNYAQG +
Sbjct: 61 CAFPVCRPCYEYERKDGTQCCPQCKTRFRRHRGSPRVEGDEDEDDVDDIENEFNYAQGAN 120
Query: 121 KARRQWQGEDLELSASSRHESQQPIPLLTNGQSVSGEIPCATPDTQSVRTTSGPLGPSER 180
KAR Q GE E S+SSRHESQ PIPLLT+G +VSGEI TPDTQSVRTTSGPLGPS+R
Sbjct: 121 KARHQRHGE--EFSSSSRHESQ-PIPLLTHGHTVSGEI--RTPDTQSVRTTSGPLGPSDR 175
Query: 181 NVHSSPYTDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQEKNMMQVTGKYSEG 240
N SSPY DPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQEKNM+Q+TGKY EG
Sbjct: 176 NAISSPYIDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQEKNMLQMTGKYHEG 235
Query: 241 KG-DIEGTGSNGEELQMADDARQPLSRVVPIPSSHLTPYXXXXXXXXXXXGFFLQYRVTH 299
KG +IEGTGSNGEELQMADD R P+SRVVPIPSS LTPY FFLQYR TH
Sbjct: 236 KGGEIEGTGSNGEELQMADDTRLPMSRVVPIPSSRLTPYRVVIILRLIILCFFLQYRTTH 295
Query: 300 PVKDAYPLWLTSVICEIWFALSWLLDQFPKWYPVNRETYLDRLALRYDREGEPSQLAPVD 359
PVK+AYPLWLTSVICEIWFA SWLLDQFPKWYP+NRETYLDRLA+RYDR+GEPSQL PVD
Sbjct: 296 PVKNAYPLWLTSVICEIWFAFSWLLDQFPKWYPINRETYLDRLAIRYDRDGEPSQLVPVD 355
Query: 360 IFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKW 419
+FVSTVDPLKEPPLVTANTVLSIL+VDYPVDKV+CYVSDDGSAMLTFE+LSETAEFA+KW
Sbjct: 356 VFVSTVDPLKEPPLVTANTVLSILSVDYPVDKVACYVSDDGSAMLTFESLSETAEFAKKW 415
Query: 420 VPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQK 479
VPFCKK NIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQK
Sbjct: 416 VPFCKKFNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQK 475
Query: 480 MPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGRSGGLDTDGNELPRLVYVSREKRPGFQHH 539
+PEEGWTMQDGTPWPGNN RDHPGMIQVFLG SGGLDTDGNELPRL+YVSREKRPGFQHH
Sbjct: 476 IPEEGWTMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDTDGNELPRLIYVSREKRPGFQHH 535
Query: 540 KKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPAYGKKTCYVQFPQ 599
KKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKA+KEAMCFMMDPA GKK CYVQFPQ
Sbjct: 536 KKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKAIKEAMCFMMDPAIGKKCCYVQFPQ 595
Query: 600 RFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEP 659
RFDGIDLHDRYANRNIVFFDIN+KGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEP
Sbjct: 596 RFDGIDLHDRYANRNIVFFDINMKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEP 655
Query: 660 NIIVXXXXXXXXXXXXSNKKYIDKKRAMKRTESTVPIFNMEDIEEGVEGYDDERSLLMSQ 719
NIIV S K +K+R + R++S P+FNMEDI+EG EGYDDERS+LMSQ
Sbjct: 656 NIIVKSCCGSRKKGKSSKKYNYEKRRGINRSDSNAPLFNMEDIDEGFEGYDDERSILMSQ 715
Query: 720 KSLEKRFGQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYG 779
+S+EKRFGQSPVFIAATFMEQGGIPPTTNPA+LLKEAIHVISCGYEDKTEWGKEIGWIYG
Sbjct: 716 RSVEKRFGQSPVFIAATFMEQGGIPPTTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYG 775
Query: 780 SVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHC 839
SVTEDILTGFKMHARGWISIYC PPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHC
Sbjct: 776 SVTEDILTGFKMHARGWISIYCNPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHC 835
Query: 840 PIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWF 899
PIWYGY+GRL+LLER+AYINTIVYP+TSIPLIAYC LPAFCL+T++FIIPEISN+AS+WF
Sbjct: 836 PIWYGYHGRLRLLERIAYINTIVYPITSIPLIAYCILPAFCLITDRFIIPEISNYASIWF 895
Query: 900 ILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFT 959
ILLFISI TGILE+RWSGV IEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFT
Sbjct: 896 ILLFISIAVTGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFT 955
Query: 960 VTSKASDDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKL 1019
VTSKA+D+DGDFAELY+FKWT+LLIPPTTVL+VNL+GIVAGVS+A+NSGYQSWGPLFGKL
Sbjct: 956 VTSKATDEDGDFAELYIFKWTALLIPPTTVLLVNLIGIVAGVSYAVNSGYQSWGPLFGKL 1015
Query: 1020 FFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANS-N 1078
FFA+WVIAHLYPFLKGLLGRQNRTPTIVIVWS+LLASIFSLLWVR++PF + AN+ N
Sbjct: 1016 FFALWVIAHLYPFLKGLLGRQNRTPTIVIVWSVLLASIFSLLWVRINPFVDANPNANNFN 1075
Query: 1079 GQCGI 1083
G+ G+
Sbjct: 1076 GKGGV 1080
|
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| TAIR|locus:2040080 CESA10 "cellulose synthase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2156789 CEV1 "CONSTITUTIVE EXPRESSION OF VSP 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2136308 CESA2 "cellulose synthase A2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178193 CESA5 "cellulose synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2176090 CESA6 "cellulose synthase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2052576 CESA9 "cellulose synthase A9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2124167 IRX1 "IRREGULAR XYLEM 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2172457 CESA4 "cellulose synthase A4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178935 IRX3 "IRREGULAR XYLEM 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| A2XN66 | CESA2_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.7187 | 0.9502 | 0.9608 | N/A | no |
| A2Z1C8 | CESA9_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.6606 | 0.9511 | 0.9781 | N/A | no |
| O48946 | CESA1_ARATH | 2, ., 4, ., 1, ., 1, 2 | 0.8774 | 0.9935 | 0.9972 | yes | no |
| Q84ZN6 | CESA8_ORYSJ | 2, ., 4, ., 1, ., 1, 2 | 0.7188 | 0.9566 | 0.9602 | no | no |
| Q9SKJ5 | CESAA_ARATH | 2, ., 4, ., 1, ., 1, 2 | 0.8162 | 0.9631 | 0.9812 | no | no |
| A2XNT2 | CESA5_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.6808 | 0.9861 | 0.9798 | N/A | no |
| A2Y0X2 | CESA1_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.8452 | 0.9852 | 0.9934 | N/A | no |
| A2WV32 | CESA4_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.6190 | 0.9013 | 0.9888 | N/A | no |
| Q941L0 | CESA3_ARATH | 2, ., 4, ., 1, ., 1, 2 | 0.7197 | 0.9677 | 0.9859 | no | no |
| Q6AT26 | CESA1_ORYSJ | 2, ., 4, ., 1, ., 1, 2 | 0.8452 | 0.9852 | 0.9934 | yes | no |
| Q84M43 | CESA2_ORYSJ | 2, ., 4, ., 1, ., 1, 2 | 0.7187 | 0.9502 | 0.9608 | no | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.4.1.12 | 0.994 |
| 3rd Layer | 2.4.1 | 0.998 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | estExt_fgenesh4_pm.C_LG_XVIII0125 | cellulose synthase (EC-2.4.1.12) (1084 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
 | ACT9 | • | 0.686 | ||||||||
 | MYB103 | • | 0.510 | ||||||||
 | grail3.0064002701 | • | 0.510 | ||||||||
 | lac1 | • | 0.510 | ||||||||
 | lac90 | • | 0.510 | ||||||||
 | lac110 | • | 0.510 | ||||||||
 | lac2 | • | 0.510 | ||||||||
 | 4CL1 | • | 0.510 | ||||||||
 | CCR | • | 0.508 | ||||||||
 | PAL2 | • | 0.507 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1085 | |||
| PLN02400 | 1085 | PLN02400, PLN02400, cellulose synthase | 0.0 | |
| PLN02638 | 1079 | PLN02638, PLN02638, cellulose synthase A (UDP-form | 0.0 | |
| PLN02436 | 1094 | PLN02436, PLN02436, cellulose synthase A | 0.0 | |
| PLN02915 | 1044 | PLN02915, PLN02915, cellulose synthase A [UDP-form | 0.0 | |
| PLN02189 | 1040 | PLN02189, PLN02189, cellulose synthase | 0.0 | |
| PLN02195 | 977 | PLN02195, PLN02195, cellulose synthase A | 0.0 | |
| pfam03552 | 716 | pfam03552, Cellulose_synt, Cellulose synthase | 0.0 | |
| PLN02248 | 1135 | PLN02248, PLN02248, cellulose synthase-like protei | 0.0 | |
| PLN02190 | 756 | PLN02190, PLN02190, cellulose synthase-like protei | 1e-144 | |
| PLN02893 | 734 | PLN02893, PLN02893, Cellulose synthase-like protei | 2e-92 | |
| PLN02893 | 734 | PLN02893, PLN02893, Cellulose synthase-like protei | 1e-56 | |
| COG1215 | 439 | COG1215, COG1215, Glycosyltransferases, probably i | 3e-12 | |
| cd06421 | 234 | cd06421, CESA_CelA_like, CESA_CelA_like are involv | 4e-12 | |
| TIGR03030 | 713 | TIGR03030, CelA, cellulose synthase catalytic subu | 8e-11 | |
| PRK11498 | 852 | PRK11498, bcsA, cellulose synthase catalytic subun | 2e-10 | |
| cd06421 | 234 | cd06421, CESA_CelA_like, CESA_CelA_like are involv | 7e-09 | |
| TIGR03030 | 713 | TIGR03030, CelA, cellulose synthase catalytic subu | 7e-08 | |
| pfam13632 | 194 | pfam13632, Glyco_trans_2_3, Glycosyl transferase f | 2e-06 | |
| pfam14446 | 55 | pfam14446, Prok-RING_1, Prokaryotic RING finger fa | 7e-05 | |
| cd06421 | 234 | cd06421, CESA_CelA_like, CESA_CelA_like are involv | 1e-04 | |
| PLN02248 | 1135 | PLN02248, PLN02248, cellulose synthase-like protei | 0.003 | |
| cd06435 | 236 | cd06435, CESA_NdvC_like, NdvC_like proteins in thi | 0.003 |
| >gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase | Back alignment and domain information |
|---|
Score = 2335 bits (6053), Expect = 0.0
Identities = 1021/1086 (94%), Positives = 1057/1086 (97%), Gaps = 2/1086 (0%)
Query: 1 MEANAGMVAGSHRRNELVRIRHDSDSGPKPLKNLNGQTCQICGDNVGLTAMGDIFVACNE 60
MEANAGMVAGS+RRNELVRIRHDSDSGPKPLKNLNGQ CQICGD+VG+T GD+FVACNE
Sbjct: 1 MEANAGMVAGSYRRNELVRIRHDSDSGPKPLKNLNGQICQICGDDVGVTETGDVFVACNE 60
Query: 61 CAFPVCRPCYEYERKDGTQSCPQCKTRYKRHKGSPRVEGDDEEDDIDDLENEFNYAQGNS 120
CAFPVCRPCYEYERKDGTQ CPQCKTRY+RHKGSPRVEGD++EDD+DDLENEFNYAQGN
Sbjct: 61 CAFPVCRPCYEYERKDGTQCCPQCKTRYRRHKGSPRVEGDEDEDDVDDLENEFNYAQGNG 120
Query: 121 KARRQWQGEDLELSASSRHESQQPIPLLTNGQSVSGEIPCATPDTQSVRTTSGPLGPSER 180
KAR QWQGED+ELS+SSRHESQ PIPLLT+GQ VSGEIPCATPD QSVRTTSGPLGP+ER
Sbjct: 121 KARHQWQGEDIELSSSSRHESQ-PIPLLTHGQPVSGEIPCATPDNQSVRTTSGPLGPAER 179
Query: 181 NVHSSPYTDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQEKNMMQVTGKYSEG 240
N +SSPY DPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQ+KNMMQ+T KY EG
Sbjct: 180 NANSSPYIDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQDKNMMQMTNKYHEG 239
Query: 241 K-GDIEGTGSNGEELQMADDARQPLSRVVPIPSSHLTPYRVVIILRLIILGFFLQYRVTH 299
K GD+EGTGSNG+ELQMADDAR P+SRVVPIPSS LTPYR+VIILRLIILGFFLQYRVTH
Sbjct: 240 KGGDMEGTGSNGDELQMADDARLPMSRVVPIPSSRLTPYRIVIILRLIILGFFLQYRVTH 299
Query: 300 PVKDAYPLWLTSVICEIWFALSWLLDQFPKWYPVNRETYLDRLALRYDREGEPSQLAPVD 359
PVKDAY LWLTSVICEIWFALSWLLDQFPKWYP+NRETYLDRLALRYDR+GEPSQLAPVD
Sbjct: 300 PVKDAYGLWLTSVICEIWFALSWLLDQFPKWYPINRETYLDRLALRYDRDGEPSQLAPVD 359
Query: 360 IFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKW 419
+FVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKW
Sbjct: 360 VFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKW 419
Query: 420 VPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQK 479
VPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQK
Sbjct: 420 VPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQK 479
Query: 480 MPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGRSGGLDTDGNELPRLVYVSREKRPGFQHH 539
+PEEGWTMQDGTPWPGNNPRDHPGMIQVFLG SGGLDTDGNELPRLVYVSREKRPGFQHH
Sbjct: 480 IPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHH 539
Query: 540 KKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPAYGKKTCYVQFPQ 599
KKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPA GKKTCYVQFPQ
Sbjct: 540 KKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPAIGKKTCYVQFPQ 599
Query: 600 RFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEP 659
RFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEP
Sbjct: 600 RFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEP 659
Query: 660 NIIVKGCCGPRKKGKGSNKKYIDKKRAMKRTESTVPIFNMEDIEEGVEGYDDERSLLMSQ 719
NIIVK CCG RKKGKGS K IDKKRAMKRTES VPIFNMEDIEEGVEGYDDERSLLMSQ
Sbjct: 660 NIIVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMEDIEEGVEGYDDERSLLMSQ 719
Query: 720 KSLEKRFGQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYG 779
KSLEKRFGQSPVFIAATFMEQGGIPP+TNPA+LLKEAIHVISCGYEDKTEWGKEIGWIYG
Sbjct: 720 KSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYG 779
Query: 780 SVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHC 839
SVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHC
Sbjct: 780 SVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHC 839
Query: 840 PIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWF 899
PIWYGYNGRLKLLERLAYINTIVYP+TSIPL+AYC LPAFCL+TNKFIIPEISN+ASMWF
Sbjct: 840 PIWYGYNGRLKLLERLAYINTIVYPITSIPLLAYCVLPAFCLITNKFIIPEISNYASMWF 899
Query: 900 ILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFT 959
ILLFISIFATGILE+RWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFT
Sbjct: 900 ILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFT 959
Query: 960 VTSKASDDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKL 1019
VTSKASD+DGDFAELYVFKWTSLLIPPTTVL+VNLVGIVAGVS+AINSGYQSWGPLFGKL
Sbjct: 960 VTSKASDEDGDFAELYVFKWTSLLIPPTTVLLVNLVGIVAGVSYAINSGYQSWGPLFGKL 1019
Query: 1020 FFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNG 1079
FFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVR+DPF SD TKA +NG
Sbjct: 1020 FFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDPFVSDTTKAAANG 1079
Query: 1080 QCGINC 1085
QCG+NC
Sbjct: 1080 QCGVNC 1085
|
Length = 1085 |
| >gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit | Back alignment and domain information |
|---|
| >gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A | Back alignment and domain information |
|---|
| >gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit | Back alignment and domain information |
|---|
| >gnl|CDD|215121 PLN02189, PLN02189, cellulose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A | Back alignment and domain information |
|---|
| >gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >gnl|CDD|222273 pfam13632, Glyco_trans_2_3, Glycosyl transferase family group 2 | Back alignment and domain information |
|---|
| >gnl|CDD|222758 pfam14446, Prok-RING_1, Prokaryotic RING finger family 1 | Back alignment and domain information |
|---|
| >gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|133057 cd06435, CESA_NdvC_like, NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1085 | |||
| PLN02400 | 1085 | cellulose synthase | 100.0 | |
| PLN02436 | 1094 | cellulose synthase A | 100.0 | |
| PLN02638 | 1079 | cellulose synthase A (UDP-forming), catalytic subu | 100.0 | |
| PLN02189 | 1040 | cellulose synthase | 100.0 | |
| PLN02915 | 1044 | cellulose synthase A [UDP-forming], catalytic subu | 100.0 | |
| PLN02195 | 977 | cellulose synthase A | 100.0 | |
| PLN02248 | 1135 | cellulose synthase-like protein | 100.0 | |
| PF03552 | 720 | Cellulose_synt: Cellulose synthase; InterPro: IPR0 | 100.0 | |
| PLN02190 | 756 | cellulose synthase-like protein | 100.0 | |
| PLN02893 | 734 | Cellulose synthase-like protein | 100.0 | |
| TIGR03030 | 713 | CelA cellulose synthase catalytic subunit (UDP-for | 100.0 | |
| PRK11498 | 852 | bcsA cellulose synthase catalytic subunit; Provisi | 100.0 | |
| PF14569 | 80 | zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A. | 100.0 | |
| PRK05454 | 691 | glucosyltransferase MdoH; Provisional | 100.0 | |
| cd04191 | 254 | Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon | 100.0 | |
| COG1215 | 439 | Glycosyltransferases, probably involved in cell wa | 99.98 | |
| PRK14583 | 444 | hmsR N-glycosyltransferase; Provisional | 99.97 | |
| TIGR03111 | 439 | glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 | 99.96 | |
| PRK11204 | 420 | N-glycosyltransferase; Provisional | 99.96 | |
| PRK14716 | 504 | bacteriophage N4 adsorption protein B; Provisional | 99.94 | |
| PRK11234 | 727 | nfrB bacteriophage N4 adsorption protein B; Provis | 99.93 | |
| cd06421 | 234 | CESA_CelA_like CESA_CelA_like are involved in the | 99.93 | |
| cd06437 | 232 | CESA_CaSu_A2 Cellulose synthase catalytic subunit | 99.93 | |
| cd06435 | 236 | CESA_NdvC_like NdvC_like proteins in this family a | 99.91 | |
| cd06427 | 241 | CESA_like_2 CESA_like_2 is a member of the cellulo | 99.91 | |
| PF13641 | 228 | Glyco_tranf_2_3: Glycosyltransferase like family 2 | 99.89 | |
| PRK15489 | 703 | nfrB bacteriophage N4 adsorption protein B; Provis | 99.85 | |
| TIGR03472 | 373 | HpnI hopanoid biosynthesis associated glycosyl tra | 99.85 | |
| cd04190 | 244 | Chitin_synth_C C-terminal domain of Chitin Synthas | 99.84 | |
| cd04192 | 229 | GT_2_like_e Subfamily of Glycosyltransferase Famil | 99.82 | |
| cd02520 | 196 | Glucosylceramide_synthase Glucosylceramide synthas | 99.8 | |
| cd06434 | 235 | GT2_HAS Hyaluronan synthases catalyze polymerizati | 99.77 | |
| COG2943 | 736 | MdoH Membrane glycosyltransferase [Cell envelope b | 99.76 | |
| cd06439 | 251 | CESA_like_1 CESA_like_1 is a member of the cellulo | 99.75 | |
| TIGR03469 | 384 | HonB hopene-associated glycosyltransferase HpnB. T | 99.75 | |
| cd02525 | 249 | Succinoglycan_BP_ExoA ExoA is involved in the bios | 99.67 | |
| PF13632 | 193 | Glyco_trans_2_3: Glycosyl transferase family group | 99.66 | |
| cd06436 | 191 | GlcNAc-1-P_transferase N-acetyl-glucosamine transf | 99.53 | |
| cd04184 | 202 | GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot | 99.43 | |
| cd06438 | 183 | EpsO_like EpsO protein participates in the methano | 99.41 | |
| cd04195 | 201 | GT2_AmsE_like GT2_AmsE_like is involved in exopoly | 99.37 | |
| PF13506 | 175 | Glyco_transf_21: Glycosyl transferase family 21 | 99.24 | |
| cd06433 | 202 | GT_2_WfgS_like WfgS and WfeV are involved in O-ant | 99.23 | |
| cd04196 | 214 | GT_2_like_d Subfamily of Glycosyltransferase Famil | 99.17 | |
| cd02510 | 299 | pp-GalNAc-T pp-GalNAc-T initiates the formation of | 99.15 | |
| cd02522 | 221 | GT_2_like_a GT_2_like_a represents a glycosyltrans | 99.11 | |
| cd06420 | 182 | GT2_Chondriotin_Pol_N N-terminal domain of Chondro | 99.09 | |
| cd04186 | 166 | GT_2_like_c Subfamily of Glycosyltransferase Famil | 99.08 | |
| PLN02726 | 243 | dolichyl-phosphate beta-D-mannosyltransferase | 99.02 | |
| PF14570 | 48 | zf-RING_4: RING/Ubox like zinc-binding domain; PDB | 99.02 | |
| cd06913 | 219 | beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran | 98.98 | |
| PF03142 | 527 | Chitin_synth_2: Chitin synthase; InterPro: IPR0048 | 98.98 | |
| cd06423 | 180 | CESA_like CESA_like is the cellulose synthase supe | 98.97 | |
| cd02526 | 237 | GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr | 98.97 | |
| PF00535 | 169 | Glycos_transf_2: Glycosyl transferase family 2; In | 98.94 | |
| cd06442 | 224 | DPM1_like DPM1_like represents putative enzymes si | 98.94 | |
| cd04185 | 202 | GT_2_like_b Subfamily of Glycosyltransferase Famil | 98.92 | |
| cd04188 | 211 | DPG_synthase DPG_synthase is involved in protein N | 98.7 | |
| PRK10073 | 328 | putative glycosyl transferase; Provisional | 98.67 | |
| cd04179 | 185 | DPM_DPG-synthase_like DPM_DPG-synthase_like is a m | 98.65 | |
| TIGR01556 | 281 | rhamnosyltran L-rhamnosyltransferase. Rhamnolipids | 98.63 | |
| PRK10018 | 279 | putative glycosyl transferase; Provisional | 98.58 | |
| PRK10063 | 248 | putative glycosyl transferase; Provisional | 98.55 | |
| cd00761 | 156 | Glyco_tranf_GTA_type Glycosyltransferase family A | 98.44 | |
| cd04187 | 181 | DPM1_like_bac Bacterial DPM1_like enzymes are rela | 98.42 | |
| PF10111 | 281 | Glyco_tranf_2_2: Glycosyltransferase like family 2 | 98.31 | |
| KOG2571 | 862 | consensus Chitin synthase/hyaluronan synthase (gly | 98.28 | |
| COG1216 | 305 | Predicted glycosyltransferases [General function p | 98.26 | |
| PTZ00260 | 333 | dolichyl-phosphate beta-glucosyltransferase; Provi | 98.24 | |
| PRK13915 | 306 | putative glucosyl-3-phosphoglycerate synthase; Pro | 98.1 | |
| PRK10714 | 325 | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi | 97.57 | |
| KOG2547 | 431 | consensus Ceramide glucosyltransferase [Lipid tran | 97.42 | |
| COG0463 | 291 | WcaA Glycosyltransferases involved in cell wall bi | 97.03 | |
| cd02511 | 229 | Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 | 97.02 | |
| COG5175 | 480 | MOT2 Transcriptional repressor [Transcription] | 96.63 | |
| TIGR00570 | 309 | cdk7 CDK-activating kinase assembly factor MAT1. A | 95.3 | |
| cd02514 | 334 | GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es | 95.11 | |
| PF14446 | 54 | Prok-RING_1: Prokaryotic RING finger family 1 | 94.86 | |
| PF02364 | 817 | Glucan_synthase: 1,3-beta-glucan synthase componen | 93.37 | |
| KOG2978 | 238 | consensus Dolichol-phosphate mannosyltransferase [ | 90.33 | |
| cd00162 | 45 | RING RING-finger (Really Interesting New Gene) dom | 88.26 | |
| PF05290 | 140 | Baculo_IE-1: Baculovirus immediate-early protein ( | 85.8 | |
| smart00504 | 63 | Ubox Modified RING finger domain. Modified RING fi | 82.0 | |
| KOG2977 | 323 | consensus Glycosyltransferase [General function pr | 80.52 |
| >PLN02400 cellulose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=2913.54 Aligned_cols=1083 Identities=94% Similarity=1.541 Sum_probs=1013.0
Q ss_pred CCCCccccccccCCceEEEeecCCCCCCCCCCCCCCccccccCCccccCCCCCeeeecCCCCCCcchhhhHhHhhcCCCC
Q 001399 1 MEANAGMVAGSHRRNELVRIRHDSDSGPKPLKNLNGQTCQICGDNVGLTAMGDIFVACNECAFPVCRPCYEYERKDGTQS 80 (1085)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~iCgd~vg~~~~G~~fvaC~eC~fpvCr~CyeyerkeG~~~ 80 (1085)
||+++|||||||||||||+|++|++.++||++++++|+||||||+||+|+|||+|||||||+|||||||||||||||||+
T Consensus 1 ~~~~~glvaGSh~Rnelv~i~~d~~~g~kp~~~~~gqiCqICGD~VG~t~dGe~FVAC~eCaFPVCRpCYEYERkeGnq~ 80 (1085)
T PLN02400 1 MEANAGMVAGSYRRNELVRIRHDSDSGPKPLKNLNGQICQICGDDVGVTETGDVFVACNECAFPVCRPCYEYERKDGTQC 80 (1085)
T ss_pred CCCccccccccccccceeeecccccccCCCccccCCceeeecccccCcCCCCCEEEEEccCCCccccchhheecccCCcc
Confidence 99999999999999999999999877789999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccccCCCCCccCCCCcCccchhhhhhccccCCccccccccccccccccccCCCCCCCCccccCCCcccCCCCC
Q 001399 81 CPQCKTRYKRHKGSPRVEGDDEEDDIDDLENEFNYAQGNSKARRQWQGEDLELSASSRHESQQPIPLLTNGQSVSGEIPC 160 (1085)
Q Consensus 81 CpqCkt~Ykr~kgsprv~gd~ee~~~dd~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 160 (1085)
|||||||||||||||||+|||||||+||+||||||++.+++...+..|++.|...++++++ +++|+||+||.|++|+++
T Consensus 81 CPQCkTrYkR~KgsprV~GDeeedd~DDlenEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~lt~g~~~s~ei~~ 159 (1085)
T PLN02400 81 CPQCKTRYRRHKGSPRVEGDEDEDDVDDLENEFNYAQGNGKARHQWQGEDIELSSSSRHES-QPIPLLTHGQPVSGEIPC 159 (1085)
T ss_pred CcccCCccccccCCCCCCcccccccchhhhhhhccccccccccccccccCccccCcccccC-CCCccccCCcccCCCCCC
Confidence 9999999999999999999999999999999999985444322222467666555556653 578999999999999999
Q ss_pred CCCCCcccccCCCCCCCCCCccccCCCCCCCCCCCccccCCCCCCCCCCCCccccchhhhhHHHHhhhccccccccCCCC
Q 001399 161 ATPDTQSVRTTSGPLGPSERNVHSSPYTDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQEKNMMQVTGKYSEG 240 (1085)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~w~~~~~~wk~~~~~~~~~~~~~~~~~ 240 (1085)
++++|+++.++.+++|..+|||||+||+|+++|+++|.+||+||+++||||||+||||||+||+||+|++.++.+...+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~vh~~p~~d~~~~~~~~~~d~~~~~~~~g~g~~~wkerv~~wk~~~~k~~~~~~~~~~~~ 239 (1085)
T PLN02400 160 ATPDNQSVRTTSGPLGPAERNANSSPYIDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQDKNMMQMTNKYHEG 239 (1085)
T ss_pred CCCccccccCCcccccccCCcccccCccCcccCCCccccCccccccccccCcHHHHHHHHHHHhhhhhhccccccccccc
Confidence 88888777776554445789999999999999999999999999999999999999999999999998877665533122
Q ss_pred C-CCCCCCCCCCcccccccccCCCCeeEeecCCCCCchhHHHHHHHHHHHHHhhheeeecccCCchhHHHHHHHHHHHHH
Q 001399 241 K-GDIEGTGSNGEELQMADDARQPLSRVVPIPSSHLTPYRVVIILRLIILGFFLQYRVTHPVKDAYPLWLTSVICEIWFA 319 (1085)
Q Consensus 241 ~-~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~yR~~i~~~l~~l~~yl~wRi~~~~~~a~~lWl~~~~~Ei~f~ 319 (1085)
+ ++.++++++++|+++|++.++||+||+++++++++|||++++++|+++++||+||++|++.+++|+|+++++||+||+
T Consensus 240 ~~g~~~~~~~~~~d~~~~~~~~~pL~~~~~i~~~~~~~yR~~~~~~lv~l~~~l~yRi~~~~~~~~~~Wl~s~~cE~wFa 319 (1085)
T PLN02400 240 KGGDMEGTGSNGDELQMADDARLPMSRVVPIPSSRLTPYRIVIILRLIILGFFLQYRVTHPVKDAYGLWLTSVICEIWFA 319 (1085)
T ss_pred cccCCCCCCCCcccccccccccCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCcccHHHHHHHHHHHHHHH
Confidence 1 344433445788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccccccccchhHhHHhhhcCCCCCCCCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEecC
Q 001399 320 LSWLLDQFPKWYPVNRETYLDRLALRYDREGEPSQLAPVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDD 399 (1085)
Q Consensus 320 ~~wiL~q~~kw~Pv~R~~~~drL~~r~e~~~~~~~lp~VDvfV~T~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDD 399 (1085)
|+|+|+|++||+||+|+||+|||++||++++++++||+|||||||+||.||||++|+||||||||+|||+|||+||||||
T Consensus 320 f~Wll~q~~Kw~Pv~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDD 399 (1085)
T PLN02400 320 LSWLLDQFPKWYPINRETYLDRLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDD 399 (1085)
T ss_pred HHHHHccCcccccccceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecC
Confidence 99999999999999999999999999999988999999999999999999999999999999999999999999999999
Q ss_pred CCchhhHHHHHHHHHHhhhhhhhhhhcCCCCCCchhhhhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 001399 400 GSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQK 479 (1085)
Q Consensus 400 G~~~lt~~al~Ea~~fA~~WvPFCkk~~iepR~Pe~YFs~k~d~~~~~~~~~f~~err~mkreYee~k~ri~~l~~~~~~ 479 (1085)
|+++||||||.|||+|||+||||||||+|||||||+||++|.|+++++.+|+|++|||+|||||||||+|||+|++++++
T Consensus 400 GgS~LTf~Al~Eaa~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~~~~ 479 (1085)
T PLN02400 400 GSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQK 479 (1085)
T ss_pred CchHHHHHHHHHHHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCCCCCcchhhhhhcCCCCCCCCCCCCCcEEEEeccCCCCCCcCcchhhhHHHHHhccccCCCc
Q 001399 480 MPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGRSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGA 559 (1085)
Q Consensus 480 ~p~~~w~m~dg~~w~g~~~~dhp~iiqv~~~~~g~~d~~~~~lP~lvYvsRekrPg~~hh~KAGalNallrvSav~tng~ 559 (1085)
+|+++|+|+||++|||++++|||+|||||++++|+.|.+|++||+||||||||||||+||+||||||+|+||||+|||||
T Consensus 480 ~~~~~~~m~dgt~W~g~~~~dHp~iIqVll~~~~~~d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP 559 (1085)
T PLN02400 480 IPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGA 559 (1085)
T ss_pred CCccccccccCccCCCCCCCCCchhhhhhhcCCCCcccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCCchHHHHHHHHhhcCCCCCCcEEEEecCccccCCCcccccccchhhhhhhhccccccCCCccccccCce
Q 001399 560 YLLNVDCDHYFNNSKALKEAMCFMMDPAYGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCC 639 (1085)
Q Consensus 560 ~Il~lDcD~~~~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~nid~~Dr~~n~~~vFfdi~~~glDg~qgp~yvGTgcv 639 (1085)
||||||||||+|||+++|+||||||||+.|+++|||||||+|+|+|++|||+|+++||||++|+|+||+|||+|+||||+
T Consensus 560 ~ILNlDCDmY~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~~~GldGlqGP~YvGTGC~ 639 (1085)
T PLN02400 560 YLLNVDCDHYFNNSKALKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCC 639 (1085)
T ss_pred eEEecccccccCCchhHHhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeeccccccccCCCccccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ehhhhhcCCCCCCcccCCCCcccccccCCCCCCCCCCCchhhhhHhhhhcccCCCccccchhhhhccCCchhhHHhhhhh
Q 001399 640 FNRQALYGYDPVLTEEDLEPNIIVKGCCGPRKKGKGSNKKYIDKKRAMKRTESTVPIFNMEDIEEGVEGYDDERSLLMSQ 719 (1085)
Q Consensus 640 fRR~ALyG~~p~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 719 (1085)
|||+||||++|+..+........|++||+.|++.++.+.+..++++..+..+++.++++++++++++++++++++..+++
T Consensus 640 frR~aLYG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 719 (1085)
T PLN02400 640 FNRQALYGYDPVLTEEDLEPNIIVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMEDIEEGVEGYDDERSLLMSQ 719 (1085)
T ss_pred eeeeeeccCCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhh
Confidence 99999999999865443223334556778776654333222223333344556778999999999999999999999999
Q ss_pred HHHhhhcCCcHHHHHHHHhhhCCCCCCCCchhhHHHHHHhhcccccccCccccccceecccccchHHHHHHHHHCCcEEE
Q 001399 720 KSLEKRFGQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISI 799 (1085)
Q Consensus 720 ~~~~~~fG~s~~f~~S~l~e~GG~p~~~~~~~~~~ea~~v~sC~YE~~T~WG~evGW~ygsvTEDi~Tg~rLh~rGWrsv 799 (1085)
++++++||+|.+|++|++++.||.+...+++++++||+||+||+||++|+||+||||+|||+|||+.||++||++||||+
T Consensus 720 ~~l~~~fG~S~~fi~S~~~~~~~~~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSvTED~~TG~~LH~rGWrSv 799 (1085)
T PLN02400 720 KSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISI 799 (1085)
T ss_pred hhhhhhccccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhhccCCccCCchhhhhCeeccceechHHHHHHHHccCCceE
Confidence 99999999999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCcccccCCCCHHHHHHHHHHHhhcchhHhhhhcCccccccCCCCCccchhhhhhcchhhhhhHHHHHHHHHHHH
Q 001399 800 YCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAF 879 (1085)
Q Consensus 800 Y~~~~~aaf~GlaP~tl~~~lkQR~RWA~G~lQIllsr~~Pl~~g~~~~L~l~QRL~Yl~~~ly~l~sl~~liylllP~l 879 (1085)
|++|++++|.|+||+|+.++++||+|||+|++||+++++||+++|+.++|+++||++|+++++||++++++++|+++|++
T Consensus 800 Y~~p~r~af~GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~~~~y~~~slp~liY~llP~l 879 (1085)
T PLN02400 800 YCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLLAYCVLPAF 879 (1085)
T ss_pred ecCCCcHhhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998877899999999999999999999999999999999
Q ss_pred HHHhcccchhhhhhHHHHHHHHHHHHHHHHHHHHhhhcCCccccccccchhhhhhhHHHHHHHHHHHHHHHHcCCCCCeE
Q 001399 880 CLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFT 959 (1085)
Q Consensus 880 ~Ll~G~~iip~~s~~~~~~fi~lfls~~~~~iLe~~wsG~s~~~wWr~eq~W~I~~vs~~LfAv~~aLlk~L~g~~~~F~ 959 (1085)
||++|++++|.++.+++++|+++|+++++++++|++|+|+++++|||+||||+|.++|+||||++++++|+|++++++|.
T Consensus 880 ~LltG~~i~P~vs~~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvLgg~~~~F~ 959 (1085)
T PLN02400 880 CLITNKFIIPEISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFT 959 (1085)
T ss_pred HHHcCCccCCccchHHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehhhHHHHHHHHHHHHHHhcCCcccce
Confidence 99999999999998998999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCCcCccceeeeccccchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcC
Q 001399 960 VTSKASDDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGR 1039 (1085)
Q Consensus 960 VTpKg~~~d~~~~~ly~f~ws~l~iP~~~Llilnligiv~Gi~~~i~~~~~~w~~l~g~l~~~~Wvv~~L~Pfl~gL~gR 1039 (1085)
||+|..++++.++++|+|+|+++++|+++++++|++|+++|+++++++++++|+++++++|+++|+++|+|||++|||||
T Consensus 960 VTsK~~d~~~~~~ely~f~~s~L~iP~ttl~llNlvaiv~Gv~~~i~~g~~~~g~l~~~~~~~~wvvv~l~Pf~kgL~gR 1039 (1085)
T PLN02400 960 VTSKASDEDGDFAELYVFKWTSLLIPPTTVLLVNLVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGR 1039 (1085)
T ss_pred ecCCcccccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999876556789999999999999999999999999999999999899999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHhhheeecCCCCCCCCCC-CCcccCCCC
Q 001399 1040 QNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKAN-SNGQCGINC 1085 (1085)
Q Consensus 1040 ~~~~P~~v~~~s~~la~~f~~l~v~i~~~~~~~~~~~-~~~~~~~~~ 1085 (1085)
++|+|+||++||++||++|+||||+|+||++++ +|| ++++|||||
T Consensus 1040 ~~r~P~~v~~~s~lla~~~~l~~v~~~~~~~~~-~~~~~~~~~~~~~ 1085 (1085)
T PLN02400 1040 QNRTPTIVIVWSILLASIFSLLWVRIDPFVSDT-TKAAANGQCGVNC 1085 (1085)
T ss_pred CCCCceeHHHHHHHHHHHHHHHheeccccccCC-CCchhHhhcCcCC
Confidence 999999999999999999999999999999999 999 899999999
|
|
| >PLN02436 cellulose synthase A | Back alignment and domain information |
|---|
| >PLN02638 cellulose synthase A (UDP-forming), catalytic subunit | Back alignment and domain information |
|---|
| >PLN02189 cellulose synthase | Back alignment and domain information |
|---|
| >PLN02915 cellulose synthase A [UDP-forming], catalytic subunit | Back alignment and domain information |
|---|
| >PLN02195 cellulose synthase A | Back alignment and domain information |
|---|
| >PLN02248 cellulose synthase-like protein | Back alignment and domain information |
|---|
| >PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals | Back alignment and domain information |
|---|
| >PLN02190 cellulose synthase-like protein | Back alignment and domain information |
|---|
| >PLN02893 Cellulose synthase-like protein | Back alignment and domain information |
|---|
| >TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >PRK11498 bcsA cellulose synthase catalytic subunit; Provisional | Back alignment and domain information |
|---|
| >PF14569 zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A | Back alignment and domain information |
|---|
| >PRK05454 glucosyltransferase MdoH; Provisional | Back alignment and domain information |
|---|
| >cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan | Back alignment and domain information |
|---|
| >COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PRK14583 hmsR N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 | Back alignment and domain information |
|---|
| >PRK11204 N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK14716 bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
| >PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
| >cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex | Back alignment and domain information |
|---|
| >cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase | Back alignment and domain information |
|---|
| >cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily | Back alignment and domain information |
|---|
| >PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A | Back alignment and domain information |
|---|
| >PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
| >TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI | Back alignment and domain information |
|---|
| >cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin | Back alignment and domain information |
|---|
| >cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis | Back alignment and domain information |
|---|
| >cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan | Back alignment and domain information |
|---|
| >COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily | Back alignment and domain information |
|---|
| >TIGR03469 HonB hopene-associated glycosyltransferase HpnB | Back alignment and domain information |
|---|
| >cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan | Back alignment and domain information |
|---|
| >PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 | Back alignment and domain information |
|---|
| >cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine | Back alignment and domain information |
|---|
| >cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis | Back alignment and domain information |
|---|
| >cd06438 EpsO_like EpsO protein participates in the methanolan synthesis | Back alignment and domain information |
|---|
| >cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis | Back alignment and domain information |
|---|
| >PF13506 Glyco_transf_21: Glycosyl transferase family 21 | Back alignment and domain information |
|---|
| >cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis | Back alignment and domain information |
|---|
| >cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans | Back alignment and domain information |
|---|
| >cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function | Back alignment and domain information |
|---|
| >cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase | Back alignment and domain information |
|---|
| >cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >PLN02726 dolichyl-phosphate beta-D-mannosyltransferase | Back alignment and domain information |
|---|
| >PF14570 zf-RING_4: RING/Ubox like zinc-binding domain; PDB: 1E4U_A 1UR6_B | Back alignment and domain information |
|---|
| >cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine | Back alignment and domain information |
|---|
| >PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 | Back alignment and domain information |
|---|
| >cd06423 CESA_like CESA_like is the cellulose synthase superfamily | Back alignment and domain information |
|---|
| >cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase | Back alignment and domain information |
|---|
| >PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 | Back alignment and domain information |
|---|
| >cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation | Back alignment and domain information |
|---|
| >PRK10073 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily | Back alignment and domain information |
|---|
| >TIGR01556 rhamnosyltran L-rhamnosyltransferase | Back alignment and domain information |
|---|
| >PRK10018 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >PRK10063 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold | Back alignment and domain information |
|---|
| >cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 | Back alignment and domain information |
|---|
| >PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] | Back alignment and domain information |
|---|
| >KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >COG1216 Predicted glycosyltransferases [General function prediction only] | Back alignment and domain information |
|---|
| >PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional | Back alignment and domain information |
|---|
| >PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional | Back alignment and domain information |
|---|
| >KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide | Back alignment and domain information |
|---|
| >COG5175 MOT2 Transcriptional repressor [Transcription] | Back alignment and domain information |
|---|
| >TIGR00570 cdk7 CDK-activating kinase assembly factor MAT1 | Back alignment and domain information |
|---|
| >cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides | Back alignment and domain information |
|---|
| >PF14446 Prok-RING_1: Prokaryotic RING finger family 1 | Back alignment and domain information |
|---|
| >PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
| >cd00162 RING RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in mediating protein-protein interactions; identified in a proteins with a wide range of functions such as viral replication, signal transduction, and development; has two variants, the C3HC4-type and a C3H2C3-type (RING-H2 finger), which have different cysteine/histidine pattern; a subset of RINGs are associated with B-Boxes (C-X2-H-X7-C-X7-C-X2-C-H-X2-H) | Back alignment and domain information |
|---|
| >PF05290 Baculo_IE-1: Baculovirus immediate-early protein (IE-0); InterPro: IPR007954 This entry contains the Baculovirus immediate-early protein IE-0 | Back alignment and domain information |
|---|
| >smart00504 Ubox Modified RING finger domain | Back alignment and domain information |
|---|
| >KOG2977 consensus Glycosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1085 | ||||
| 1weo_A | 93 | Solution Structure Of Ring-Finger In The Catalytic | 6e-31 | ||
| 4hg6_A | 802 | Structure Of A Cellulose Synthase - Cellulose Trans | 6e-05 |
| >pdb|1WEO|A Chain A, Solution Structure Of Ring-Finger In The Catalytic Subunit (Irx3) Of Cellulose Synthase Length = 93 | Back alignment and structure |
|
| >pdb|4HG6|A Chain A, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate Length = 802 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1085 | |||
| 1weo_A | 93 | Cellulose synthase, catalytic subunit (IRX3); stru | 2e-46 | |
| 1e4u_A | 78 | Transcriptional repressor NOT4; gene regulation, t | 1e-07 |
| >1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1 Length = 93 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 2e-46
Identities = 64/90 (71%), Positives = 76/90 (84%)
Query: 23 DSDSGPKPLKNLNGQTCQICGDNVGLTAMGDIFVACNECAFPVCRPCYEYERKDGTQSCP 82
SGPKPLKNL+GQ C+ICGD +GLT GD+FVACNEC FP CRPCYEYER++GTQ+CP
Sbjct: 3 SGSSGPKPLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCP 62
Query: 83 QCKTRYKRHKGSPRVEGDDEEDDIDDLENE 112
QCKTRYKR +GSPRVEGD++E+DID +
Sbjct: 63 QCKTRYKRLRGSPRVEGDEDEEDIDSGPSS 92
|
| >1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B Length = 78 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1085 | |||
| 4hg6_A | 802 | Cellulose synthase subunit A; membrane translocati | 100.0 | |
| 1weo_A | 93 | Cellulose synthase, catalytic subunit (IRX3); stru | 100.0 | |
| 2z86_A | 625 | Chondroitin synthase; GT-A, glycosyltransferase A, | 99.54 | |
| 1xhb_A | 472 | Polypeptide N-acetylgalactosaminyltransferase 1; g | 99.45 | |
| 2d7i_A | 570 | Polypeptide N-acetylgalactosaminyltransferase 10; | 99.42 | |
| 3bcv_A | 240 | Putative glycosyltransferase protein; protein stru | 99.38 | |
| 1qg8_A | 255 | Protein (spore coat polysaccharide biosynthesis P | 99.37 | |
| 2ffu_A | 501 | Ppgalnact-2, polypeptide N-acetylgalactosaminyltra | 99.35 | |
| 2z86_A | 625 | Chondroitin synthase; GT-A, glycosyltransferase A, | 99.27 | |
| 4fix_A | 657 | UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 | 98.9 | |
| 3ckj_A | 329 | Putative uncharacterized protein; mycobacteria, un | 98.87 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 98.84 | |
| 2fy7_A | 287 | Beta-1,4-galactosyltransferase 1; M339H mutant, AP | 98.58 | |
| 3f1y_A | 387 | Mannosyl-3-phosphoglycerate synthase; GT-A type gl | 98.05 | |
| 2nxv_A | 249 | ATP synthase subunits region ORF 6; majastridin, A | 97.79 | |
| 1e4u_A | 78 | Transcriptional repressor NOT4; gene regulation, t | 96.5 | |
| 1fo8_A | 343 | Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl | 96.02 | |
| 2bo4_A | 397 | Mannosylglycerate synthase; catalysis, glycosyltra | 94.89 | |
| 2zu9_A | 394 | Mannosyl-3-phosphoglycerate synthase; GT-A fold, g | 93.02 | |
| 2d8s_A | 80 | Cellular modulator of immune recognition; C-MIR, m | 88.83 | |
| 2ea6_A | 69 | Ring finger protein 4; RNF4, RES4-26, ring domain, | 88.64 | |
| 1vyx_A | 60 | ORF K3, K3RING; zinc-binding protein, ring domain, | 88.56 | |
| 2wvl_A | 391 | Mannosyl-3-phosphoglycerate synthase; GT-A fold, t | 87.97 | |
| 3ng2_A | 71 | RNF4, snurf, ring finger protein 4; ring domain, E | 86.59 | |
| 2ect_A | 78 | Ring finger protein 126; metal binding protein, st | 86.35 | |
| 1t1h_A | 78 | Gspef-atpub14, armadillo repeat containing protein | 86.25 | |
| 1g25_A | 65 | CDK-activating kinase assembly factor MAT1; ring f | 85.89 | |
| 2ecy_A | 66 | TNF receptor-associated factor 3; metal binding pr | 84.95 | |
| 2xeu_A | 64 | Ring finger protein 4; transcription, zinc-finger, | 84.55 | |
| 2ckl_B | 165 | Ubiquitin ligase protein RING2; BMI1, RING1B, poly | 83.88 | |
| 2ysl_A | 73 | Tripartite motif-containing protein 31; ring-type | 83.18 | |
| 1iym_A | 55 | EL5; ring-H2 finger, ubiquitin ligase, DNA binding | 82.74 | |
| 2csz_A | 76 | Synaptotagmin-like protein 4; exophilin 2, granuph | 82.22 | |
| 2ecm_A | 55 | Ring finger and CHY zinc finger domain- containing | 81.96 | |
| 3fl2_A | 124 | E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA | 81.26 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 81.11 | |
| 1v87_A | 114 | Deltex protein 2; ring-H2 domain, zinc-binding dom | 80.92 |
| >4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-51 Score=501.07 Aligned_cols=490 Identities=21% Similarity=0.329 Sum_probs=378.1
Q ss_pred HHHHHHHHHHHHHhhheeeecccCCc-----hhHHHHHHHHHHHHHHHHHHhhcccccccccchhHhHHhhhcCCCCCCC
Q 001399 279 RVVIILRLIILGFFLQYRVTHPVKDA-----YPLWLTSVICEIWFALSWLLDQFPKWYPVNRETYLDRLALRYDREGEPS 353 (1085)
Q Consensus 279 R~~i~~~l~~l~~yl~wRi~~~~~~a-----~~lWl~~~~~Ei~f~~~wiL~q~~kw~Pv~R~~~~drL~~r~e~~~~~~ 353 (1085)
.+++++.+++.++|++||++.+++.. +++|++++++|+++.+.|++..+..+.|..|...++ ..++
T Consensus 67 ~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~---------~~~~ 137 (802)
T 4hg6_A 67 FLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRP---------LQPE 137 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCC---------CCTT
T ss_pred HHHHHHHHHHHHHHHHHHhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCC---------CCcc
Confidence 34577777788999999999887632 467888999999999999999999999998865422 2356
Q ss_pred CCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEecCCCchhhHHHHHHHHHHhhhhhhhhhhcCCCCCCc
Q 001399 354 QLAPVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAP 433 (1085)
Q Consensus 354 ~lp~VDvfV~T~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~lt~~al~Ea~~fA~~WvPFCkk~~iepR~P 433 (1085)
++|.|+|+||||| |++.++.+|+.|++++|||.+++.|+|+|||+++-|.+.
T Consensus 138 ~~P~VSViIPtyN---e~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~------------------------- 189 (802)
T 4hg6_A 138 ELPTVDILVPSYN---EPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMS------------------------- 189 (802)
T ss_dssp TCCCEEEEEECTT---CCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTC-------------------------
T ss_pred CCCcEEEEEEECC---CCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCcccccc-------------------------
Confidence 7999999999998 999999999999999999999999999999999855431
Q ss_pred hhhhhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCCCCcchhhhhhcCCC
Q 001399 434 EFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGRSG 513 (1085)
Q Consensus 434 e~YFs~k~d~~~~~~~~~f~~err~mkreYee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~g~~~~dhp~iiqv~~~~~g 513 (1085)
..|+.+++..+ .++ .+++++++
T Consensus 190 --------------~d~~i~~~~~~---~~~----~l~~~~~~------------------------------------- 211 (802)
T 4hg6_A 190 --------------PDPELAQKAQE---RRR----ELQQLCRE------------------------------------- 211 (802)
T ss_dssp --------------SSHHHHHHHHH---HHH----HHHHHHHH-------------------------------------
T ss_pred --------------CCHHHHHHHHh---hhH----HHHHHHHh-------------------------------------
Confidence 11222222111 111 22223211
Q ss_pred CCCCCCCCCCcEEEEeccCCCCCCcCcchhhhHHHHHhccccCCCcEEEEecCCCCCCchHHHHHHHHhh-cCCCCCCcE
Q 001399 514 GLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFM-MDPAYGKKT 592 (1085)
Q Consensus 514 ~~d~~~~~lP~lvYvsRekrPg~~hh~KAGalNallrvSav~tng~~Il~lDcD~~~~~~~~Lr~am~ff-~Dp~~g~~v 592 (1085)
.++.|+.|++ +++.||||+|.+++. +++|||+++|||++ +.|++|++++.+| .|| ++
T Consensus 212 ---------~~v~~i~~~~----~~~GKa~alN~gl~~----a~gd~Il~lDaD~~-~~pd~L~~lv~~~~~dp----~v 269 (802)
T 4hg6_A 212 ---------LGVVYSTRER----NEHAKAGNMSAALER----LKGELVVVFDADHV-PSRDFLARTVGYFVEDP----DL 269 (802)
T ss_dssp ---------HTCEEEECSS----CCSHHHHHHHHHHHH----CCCSEEEECCTTEE-ECTTHHHHHHHHHHHSS----SC
T ss_pred ---------cCcEEEEecC----CCCcchHHHHHHHHh----cCCCEEEEECCCCC-cChHHHHHHHHHHhcCC----Ce
Confidence 0278999988 677899999999996 69999999999998 5899999999999 588 89
Q ss_pred EEEecCccccCCCcc-------cccccchhhhhhhhccccccCCCccccccCceehhhhhcCCCCCCcccCCCCcccccc
Q 001399 593 CYVQFPQRFDGIDLH-------DRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIIVKG 665 (1085)
Q Consensus 593 a~VQ~PQ~F~nid~~-------Dr~~n~~~vFfdi~~~glDg~qgp~yvGTgcvfRR~ALyG~~p~~~~~~~~~~~~~~~ 665 (1085)
++||+|+.+.|.++. .++.+++..||...+.+.+.+++++++|++++|||+++
T Consensus 270 ~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al-------------------- 329 (802)
T 4hg6_A 270 FLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRAL-------------------- 329 (802)
T ss_dssp CEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHH--------------------
T ss_pred EEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHH--------------------
Confidence 999999999988742 44567788999999999999999999999999999777
Q ss_pred cCCCCCCCCCCCchhhhhHhhhhcccCCCccccchhhhhccCCchhhHHhhhhhHHHhhhcCCcHHHHHHHHhhhCCCCC
Q 001399 666 CCGPRKKGKGSNKKYIDKKRAMKRTESTVPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPP 745 (1085)
Q Consensus 666 c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~p~ 745 (1085)
+++||+++
T Consensus 330 ------------------------------------------------------------------------~~vGgf~~ 337 (802)
T 4hg6_A 330 ------------------------------------------------------------------------DEAGGFAG 337 (802)
T ss_dssp ------------------------------------------------------------------------HHHTTCCC
T ss_pred ------------------------------------------------------------------------HHcCCcCC
Confidence 35677665
Q ss_pred CCCchhhHHHHHHhhcccccccCccccccceecccccchHHHHHHHHHCCcEEEEeCCCCCcccccCCCCHHHHHHHHHH
Q 001399 746 TTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLR 825 (1085)
Q Consensus 746 ~~~~~~~~~ea~~v~sC~YE~~T~WG~evGW~ygsvTEDi~Tg~rLh~rGWrsvY~~~~~aaf~GlaP~tl~~~lkQR~R 825 (1085)
++++||.+++++++++|||++|+++... ++.+|+|+.++++||.|
T Consensus 338 ---------------------------------~~~~ED~~l~~rl~~~G~ri~~~~~~~~--~~~~p~t~~~~~~Qr~R 382 (802)
T 4hg6_A 338 ---------------------------------ETITEDAETALEIHSRGWKSLYIDRAMI--AGLQPETFASFIQQRGR 382 (802)
T ss_dssp ---------------------------------SSSSHHHHHHHHHHTTTCCEEECCCCCE--EECCCCSHHHHHHHHHH
T ss_pred ---------------------------------CCcchHHHHHHHHHHcCCeEEEecCCEE--EecCCCCHHHHHHHHHH
Confidence 4789999999999999999999976554 89999999999999999
Q ss_pred HhhcchhHhhhhcCccccccCCCCCccchhhhhhcchhhhhhHHHHHHHHHHHHHHHhcccchhhhhhHHHHHHHHH-HH
Q 001399 826 WALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILL-FI 904 (1085)
Q Consensus 826 WA~G~lQIllsr~~Pl~~g~~~~L~l~QRL~Yl~~~ly~l~sl~~liylllP~l~Ll~G~~iip~~s~~~~~~fi~l-fl 904 (1085)
|++|.+|+++ +++|++ .+++++.||+.|+...++++.+++.++++++|+++++++..++......++.+++.. ++
T Consensus 383 W~~G~~q~l~-~~~pl~---~~~l~~~~rl~~l~~~~~~~~~~~~li~ll~p~~~ll~~~~~~~~~~~~~~~~~lp~~l~ 458 (802)
T 4hg6_A 383 WATGMMQMLL-LKNPLF---RRGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLAYMPGYLAV 458 (802)
T ss_dssp HHHHHHHHHH-HSCTTS---CSSCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHHHHH
T ss_pred HHccHHHHHH-HhCccc---cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHH
Confidence 9999999998 457877 678999999999999999999999999999999999999888765433333332222 22
Q ss_pred HHHHHHHHHhhhcCCccccccccchhhhhhhHHHHHHHHHHHHHH-HHcCCCCCeEeccCCCCCCcCccceeeeccccch
Q 001399 905 SIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLK-VLAGIDTNFTVTSKASDDDGDFAELYVFKWTSLL 983 (1085)
Q Consensus 905 s~~~~~iLe~~wsG~s~~~wWr~eq~W~I~~vs~~LfAv~~aLlk-~L~g~~~~F~VTpKg~~~d~~~~~ly~f~ws~l~ 983 (1085)
...+...+ +.+.. ..|| ++.++.+.+ ++ .+.+++. .+++++.+|+||+|+...+..+ + + .++
T Consensus 459 ~~~~~~~~---~~~~r-~~~~-~~l~~~~~~----~~-~~~a~l~~l~~~~~~~f~VT~Kg~~~~~~~-----~-~-~~~ 521 (802)
T 4hg6_A 459 SFLVQNAL---FARQR-WPLV-SEVYEVAQA----PY-LARAIVTTLLRPRSARFAVTAKDETLSENY-----I-S-PIY 521 (802)
T ss_dssp HHHHHHHH---HTTTS-CTTH-HHHHHHHHH----HH-HHHHHHHHHHSTTCCCCCCCCCCCCCSSCC-----B-C-TTC
T ss_pred HHHHHHHH---hcCcH-HHHH-HHHHHHHHH----HH-HHHHHHHHHhCCCCCcceECCCCccccccc-----h-h-hHH
Confidence 22222222 22111 1122 233322211 11 2333333 3467889999999998644332 1 3 477
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhh
Q 001399 984 IPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLL 1037 (1085)
Q Consensus 984 iP~~~Llilnligiv~Gi~~~i~~~~~~w~~l~g~l~~~~Wvv~~L~Pfl~gL~ 1037 (1085)
.|++++++++++++++|++++..... +..+.+++++|.++|++.+.-++.
T Consensus 522 ~p~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~w~~~~l~~l~~~~~ 571 (802)
T 4hg6_A 522 RPLLFTFLLCLSGVLATLVRWVAFPG----DRSVLLVVGGWAVLNVLLVGFALR 571 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCGG----GHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCC----ccchhhhhhHHHHHHHHHHHHHHH
Confidence 89999999999999999998875432 345678999999999999988884
|
| >1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1 | Back alignment and structure |
|---|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* | Back alignment and structure |
|---|
| >1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 | Back alignment and structure |
|---|
| >2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* | Back alignment and structure |
|---|
| >3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* | Back alignment and structure |
|---|
| >2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* | Back alignment and structure |
|---|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* | Back alignment and structure |
|---|
| >4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* | Back alignment and structure |
|---|
| >3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A | Back alignment and structure |
|---|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
| >2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... | Back alignment and structure |
|---|
| >3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* | Back alignment and structure |
|---|
| >2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* | Back alignment and structure |
|---|
| >1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B | Back alignment and structure |
|---|
| >1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* | Back alignment and structure |
|---|
| >2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* | Back alignment and structure |
|---|
| >2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A* | Back alignment and structure |
|---|
| >2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3 | Back alignment and structure |
|---|
| >2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A* | Back alignment and structure |
|---|
| >3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
| >2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} | Back alignment and structure |
|---|
| >1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2 | Back alignment and structure |
|---|
| >1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1 | Back alignment and structure |
|---|
| >2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens} | Back alignment and structure |
|---|
| >2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B | Back alignment and structure |
|---|
| >2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1 | Back alignment and structure |
|---|
| >2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A | Back alignment and structure |
|---|
| >3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens} | Back alignment and structure |
|---|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
| >1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1085 | ||||
| d1weoa_ | 93 | g.44.1.1 (A:) Cellulose synthase A catalytic subun | 1e-53 | |
| d1g25a_ | 65 | g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapi | 6e-05 |
| >d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 93 | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: RING finger domain, C3HC4 domain: Cellulose synthase A catalytic subunit 7, IRX3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 179 bits (455), Expect = 1e-53
Identities = 64/84 (76%), Positives = 75/84 (89%)
Query: 25 DSGPKPLKNLNGQTCQICGDNVGLTAMGDIFVACNECAFPVCRPCYEYERKDGTQSCPQC 84
SGPKPLKNL+GQ C+ICGD +GLT GD+FVACNEC FP CRPCYEYER++GTQ+CPQC
Sbjct: 5 SSGPKPLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQC 64
Query: 85 KTRYKRHKGSPRVEGDDEEDDIDD 108
KTRYKR +GSPRVEGD++E+DID
Sbjct: 65 KTRYKRLRGSPRVEGDEDEEDIDS 88
|
| >d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]} Length = 65 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1085 | |||
| d1weoa_ | 93 | Cellulose synthase A catalytic subunit 7, IRX3 {Th | 100.0 | |
| d1xhba2 | 328 | Polypeptide N-acetylgalactosaminyltransferase 1, N | 99.45 | |
| d1qg8a_ | 255 | Spore coat polysaccharide biosynthesis protein Sps | 99.02 | |
| d1omza_ | 265 | Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga | 98.65 | |
| d1ur6b_ | 52 | Not-4 N-terminal RING finger domain {Human (Homo s | 96.01 | |
| d1g25a_ | 65 | TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9 | 95.34 | |
| d2bo4a1 | 381 | Mannosylglycerate synthase, MGS {Rhodothermus mari | 94.63 | |
| d1vyxa_ | 60 | IE1B protein (ORF K3), N-terminal domain {Kaposi's | 94.26 | |
| d1chca_ | 68 | Immediate early protein, IEEHV {Equine herpesvirus | 90.0 | |
| d1rmda2 | 86 | V(D)J recombination activating protein 1 (RAG1), d | 81.36 |
| >d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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class: Small proteins fold: RING/U-box superfamily: RING/U-box family: RING finger domain, C3HC4 domain: Cellulose synthase A catalytic subunit 7, IRX3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=7.9e-46 Score=327.41 Aligned_cols=86 Identities=74% Similarity=1.496 Sum_probs=82.6
Q ss_pred CCCCCCCCCCCCCCccccccCCccccCCCCCeeeecCCCCCCcchhhhHhHhhcCCCCCCCCcccccccCCCCCccCCCC
Q 001399 23 DSDSGPKPLKNLNGQTCQICGDNVGLTAMGDIFVACNECAFPVCRPCYEYERKDGTQSCPQCKTRYKRHKGSPRVEGDDE 102 (1085)
Q Consensus 23 ~~~~~~~~~~~~~~~~C~iCgd~vg~~~~G~~fvaC~eC~fpvCr~CyeyerkeG~~~CpqCkt~Ykr~kgsprv~gd~e 102 (1085)
+++.++||++++++|+||||||+||+++|||+|||||||+|||||||||||||||||+|||||||||||||||||+||++
T Consensus 3 ~g~~g~kp~~~~~~q~CqiCGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCkt~Ykr~kgsprv~gDe~ 82 (93)
T d1weoa_ 3 SGSSGPKPLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKRLRGSPRVEGDED 82 (93)
T ss_dssp CSSSSSSCCSCCSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCCCCTTCCCCTTSCC
T ss_pred CCCCCCCChhhcccchhhhcccccccCCCCCEEEEecccCCccchHHHHHHHhccCccCcccCChhhhhcCCCCCCCCcc
Confidence 45667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccch
Q 001399 103 EDDIDD 108 (1085)
Q Consensus 103 e~~~dd 108 (1085)
||++||
T Consensus 83 e~~~d~ 88 (93)
T d1weoa_ 83 EEDIDS 88 (93)
T ss_dssp CCCSCC
T ss_pred cccccc
Confidence 998875
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| >d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
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| >d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} | Back information, alignment and structure |
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| >d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]} | Back information, alignment and structure |
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| >d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]} | Back information, alignment and structure |
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| >d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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