Citrus Sinensis ID: 001492
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1067 | 2.2.26 [Sep-21-2011] | |||||||
| Q8RY24 | 1062 | Probable sucrose-phosphat | yes | no | 0.985 | 0.990 | 0.781 | 0.0 | |
| O04933 | 1081 | Probable sucrose-phosphat | N/A | no | 0.989 | 0.976 | 0.770 | 0.0 | |
| P31927 | 1068 | Sucrose-phosphate synthas | N/A | no | 0.979 | 0.978 | 0.696 | 0.0 | |
| Q0JGK4 | 1084 | Probable sucrose-phosphat | yes | no | 0.975 | 0.960 | 0.679 | 0.0 | |
| A2WYE9 | 1084 | Probable sucrose-phosphat | N/A | no | 0.975 | 0.960 | 0.679 | 0.0 | |
| P31928 | 1056 | Sucrose-phosphate synthas | N/A | no | 0.963 | 0.973 | 0.574 | 0.0 | |
| O22060 | 1057 | Probable sucrose-phosphat | N/A | no | 0.973 | 0.982 | 0.587 | 0.0 | |
| Q43845 | 1053 | Probable sucrose-phosphat | N/A | no | 0.969 | 0.981 | 0.574 | 0.0 | |
| F4JLK2 | 1050 | Probable sucrose-phosphat | no | no | 0.953 | 0.968 | 0.566 | 0.0 | |
| O04932 | 1054 | Probable sucrose-phosphat | N/A | no | 0.934 | 0.945 | 0.583 | 0.0 |
| >sp|Q8RY24|SPSA3_ARATH Probable sucrose-phosphate synthase 3 OS=Arabidopsis thaliana GN=SPS3 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 1744 bits (4516), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 839/1073 (78%), Positives = 941/1073 (87%), Gaps = 21/1073 (1%)
Query: 1 MAGNEWINGYLEAILDSGASAIEEQQK--QAPVNL--ADRGHFNPTKYFVEEVVTSVDET 56
MAGNEWINGYLEAILDS A IEE Q+ QA VNL D +FNPTKYFVEEVVT VDET
Sbjct: 1 MAGNEWINGYLEAILDSQAQGIEETQQKPQASVNLREGDGQYFNPTKYFVEEVVTGVDET 60
Query: 57 DLYRTWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQRLANRRLEREQGRRD 116
DL+RTW+KVVATRN+RER+SRLENMCWRIWHLTRKKKQLEWE+ QR+ANRRLEREQGRRD
Sbjct: 61 DLHRTWLKVVATRNSRERNSRLENMCWRIWHLTRKKKQLEWEDSQRIANRRLEREQGRRD 120
Query: 117 VTEDMSEDLSEGEKGDGVGEIQTPDTPRKKFQRNFSNLEVWSDDKKEKKLYIVLISLHGL 176
TED+SEDLSEGEKGDG+GEI P+TPR++ QRN SNLE+WSDDKKE +LY+VLISLHGL
Sbjct: 121 ATEDLSEDLSEGEKGDGLGEIVQPETPRRQLQRNLSNLEIWSDDKKENRLYVVLISLHGL 180
Query: 177 VRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEML 236
VRGENMELG DSDTGGQ+KYVVELARALARMPGVYRVDLF+RQ+ S EVDWSY EP EML
Sbjct: 181 VRGENMELGSDSDTGGQVKYVVELARALARMPGVYRVDLFTRQICSSEVDWSYAEPTEML 240
Query: 237 TGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGE 296
T + DG E GESSGAYIIRIPFGPRDKYL KE+LWP++QEFVDGALAH LNMSKVLGE
Sbjct: 241 TTAEDCDGDETGESSGAYIIRIPFGPRDKYLNKEILWPFVQEFVDGALAHILNMSKVLGE 300
Query: 297 QIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKED 356
QIG G+PVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKED
Sbjct: 301 QIGKGKPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKED 360
Query: 357 INSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNC 416
INSTYKI RRIE EELSLDAAELVITST+QEIDEQWGLYDGFDVKLEKVLRARARRGVNC
Sbjct: 361 INSTYKIKRRIEAEELSLDAAELVITSTRQEIDEQWGLYDGFDVKLEKVLRARARRGVNC 420
Query: 417 HGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLT 476
HGR+MPRM VIPPGMDF+NV QEDTPE DG+L SL+GGT+GSSPKA+P IWS+VMRF T
Sbjct: 421 HGRFMPRMAVIPPGMDFTNVEVQEDTPEGDGDLASLVGGTEGSSPKAVPTIWSEVMRFFT 480
Query: 477 NPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLI 536
NPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDI+E+SSGNASVL
Sbjct: 481 NPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIDELSSGNASVLT 540
Query: 537 TVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHG 596
TVLKLIDKYDLYG VAYPKHHKQ DVP+IYRLAA TKGVFINPALVEPFGLTLIEAAAHG
Sbjct: 541 TVLKLIDKYDLYGSVAYPKHHKQSDVPDIYRLAANTKGVFINPALVEPFGLTLIEAAAHG 600
Query: 597 LPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLF 656
LPMVATKNGGPVDIHRAL+NGLLVDPHDQ+AIA+ALLKLVSEKNLW ECR NGWKNIHLF
Sbjct: 601 LPMVATKNGGPVDIHRALHNGLLVDPHDQEAIANALLKLVSEKNLWHECRINGWKNIHLF 660
Query: 657 SWPEHCRTYLTRVAACRMRHPQWQTDTPVDEMAAE--ESSFNDSLKDVQDMSLRLSVDGD 714
SWPEHCRTYLTR+AACRMRHPQWQTD DE+AA+ E S NDSLKDVQDMSLRLS+DGD
Sbjct: 661 SWPEHCRTYLTRIAACRMRHPQWQTDA--DEVAAQDDEFSLNDSLKDVQDMSLRLSMDGD 718
Query: 715 KSSLNGSLDYTAASSGDPVQDQVKRVLSKIKKPDSDSNDKEAEKKLLENVVSKYPMLRRR 774
K SLNGSL+ +A D VK+++S+++ P+ S + KK +N+ SKYP+LRRR
Sbjct: 719 KPSLNGSLEPNSA-------DPVKQIMSRMRTPEIKSKPELQGKKQSDNLGSKYPVLRRR 771
Query: 775 RRLIVIALDCYDSKGAPDKK-MIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFL 833
RL+V+A+DCYD++GAPD+K M+ ++ ++ KAVR D Q A+ +GFA+ST+MP+ E FL
Sbjct: 772 ERLVVLAVDCYDNEGAPDEKAMVPMIQNIIKAVRSDPQMAKNSGFAISTSMPLDELTRFL 831
Query: 834 NSMKIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKL 893
S KI+ +EFD LICSSG E+YYPG E GKL PDPDY+SHIDYRWG +GLK T+WKL
Sbjct: 832 KSAKIQVSEFDTLICSSGSEVYYPGG---EEGKLLPDPDYSSHIDYRWGMEGLKNTVWKL 888
Query: 894 MNTTEGGENSKNSSSP--IQEDQKSSNAHCISYLIKDPSKARRIDDLRQKLRMRGLRCHP 951
MNTT G ++N SP IQEDQ SSN+HC++Y+IKD SK R+DDLRQKLR+RGLRCHP
Sbjct: 889 MNTTAVGGEARNKGSPSLIQEDQASSNSHCVAYMIKDRSKVMRVDDLRQKLRLRGLRCHP 948
Query: 952 MYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLI 1011
MYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANM+V++G+ GDTDYEELISG HKT+I
Sbjct: 949 MYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMYVVVGDRGDTDYEELISGTHKTVI 1008
Query: 1012 MKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVGKAS 1064
+KG+V GS+ LLR+T+LRDDIVPSESP I + ++ V EI + +Q+ KA+
Sbjct: 1009 VKGLVTLGSDALLRSTDLRDDIVPSESPFIGFLKVDSPVKEITDIFKQLSKAT 1061
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 4 |
| >sp|O04933|SPSA2_CRAPL Probable sucrose-phosphate synthase 2 OS=Craterostigma plantagineum GN=SPS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1704 bits (4413), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 840/1090 (77%), Positives = 940/1090 (86%), Gaps = 34/1090 (3%)
Query: 1 MAGNEWINGYLEAILDSGASAIEEQQKQAPVNLADRG-----HFNPTKYFVEEVVTSVDE 55
MAGNEWINGYLEAILD+GASAI+E A +G HFNPTKYFVEEVV+ VDE
Sbjct: 1 MAGNEWINGYLEAILDTGASAIDENSGGGKTAAAQKGRHHDHHFNPTKYFVEEVVSGVDE 60
Query: 56 TDLYRTWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQRLANRRLEREQGRR 115
+DL+RTWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWE+LQRLA R+ EREQGR+
Sbjct: 61 SDLHRTWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEDLQRLAARKWEREQGRK 120
Query: 116 DVTEDMSEDLSEGEKGDGVGEIQTP---DTPR--KKFQRNFSNLEVWSDDKKEKKLYIVL 170
DVTEDMSEDLSEGEKGD +GE TP D+PR KK+ RNFSNLEVWSD KEKKLYIVL
Sbjct: 121 DVTEDMSEDLSEGEKGDVMGE--TPVALDSPRGNKKYHRNFSNLEVWSDSNKEKKLYIVL 178
Query: 171 ISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYG 230
ISLHGLVRGENMELGRDSDTGGQIKYVVE+ARALA+MPGVYRVDLF+RQ+SSPEVDWSY
Sbjct: 179 ISLHGLVRGENMELGRDSDTGGQIKYVVEVARALAKMPGVYRVDLFTRQISSPEVDWSYA 238
Query: 231 EPAEMLTGGPED-----------DGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEF 279
EP EML+ + ++GE SGAYIIRIPFGPRDKYLRKELLWP+IQEF
Sbjct: 239 EPTEMLSSSSTTAGEAHEPEEEEEEEDLGEGSGAYIIRIPFGPRDKYLRKELLWPHIQEF 298
Query: 280 VDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLG 339
VDGAL+H +NMSK LG+QIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLG
Sbjct: 299 VDGALSHIVNMSKALGDQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLG 358
Query: 340 RNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFD 399
RNKLEQLLKQGRQ+KEDINS Y+IMRRIE EELSLDAAELVITSTKQEI+EQWGLYDGFD
Sbjct: 359 RNKLEQLLKQGRQTKEDINSMYRIMRRIEAEELSLDAAELVITSTKQEIEEQWGLYDGFD 418
Query: 400 VKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGS 459
VKLE+VLRARARRGVNCHGR+MPRM VIPPGMDFSNVV ED E DG+L +L T+ +
Sbjct: 419 VKLERVLRARARRGVNCHGRFMPRMAVIPPGMDFSNVVVPEDGSEGDGDLATL---TEAT 475
Query: 460 SPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMG 519
SP+++PAIW+DVMRFLTNPHKPMILALSRPDPKKNITTL+KAFGECRPLRELANLTLIMG
Sbjct: 476 SPRSVPAIWADVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLTLIMG 535
Query: 520 NRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINP 579
NRDDI+EMS GNASVL TVLKLID+YDLYGQVA+PKHHKQ DVPEIYRLA+KTKGVFINP
Sbjct: 536 NRDDIDEMSGGNASVLTTVLKLIDRYDLYGQVAFPKHHKQSDVPEIYRLASKTKGVFINP 595
Query: 580 ALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEK 639
A +EPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQ AIA+ALLKLVSEK
Sbjct: 596 AFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQDAIANALLKLVSEK 655
Query: 640 NLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRMRHPQWQTDTPVDEMAAEESSFNDSL 699
NLW ECRKNG KNIHLFSWPEHCRTYLTRVAACRMRHPQW+TDTP+DE A ++ S NDSL
Sbjct: 656 NLWNECRKNGLKNIHLFSWPEHCRTYLTRVAACRMRHPQWKTDTPLDETAIDD-SLNDSL 714
Query: 700 KDVQDMSLRLSVDGDKSSLN--GSLDYTAASSGDPVQDQVKRVLSKIKKPDSDSNDKEAE 757
KDV DMSLRLSVDG+K S+N S++ + + + DQV+RVL+KIK+ DS +EAE
Sbjct: 715 KDVLDMSLRLSVDGEKMSVNESSSVELPGGEAAE-LPDQVRRVLNKIKRQDSGPAQREAE 773
Query: 758 KKLLENVVSKYPMLRRRRRLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTG 817
K +V KYPMLRRRR+L VIALDCYD KG PDKKMI + ++ +AVRLD Q +R +G
Sbjct: 774 GK-AGDVPGKYPMLRRRRKLFVIALDCYDLKGNPDKKMILSIQEIVRAVRLDPQMSRFSG 832
Query: 818 FALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHI 877
FALSTAMPV+E +FL + ++ N+FDALICSSG E+YYPGTY EE GKL+ DPDY SHI
Sbjct: 833 FALSTAMPVAELADFLKAGDVKVNDFDALICSSGSEVYYPGTYGEESGKLYLDPDYTSHI 892
Query: 878 DYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDD 937
+YRWG DGLKKTI KLMNT E G++S +SSPI+ KSSN+HC+SY IKDPSKA+++DD
Sbjct: 893 EYRWGGDGLKKTISKLMNTAEDGKSSV-ASSPIELVAKSSNSHCLSYAIKDPSKAKKVDD 951
Query: 938 LRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDT 997
+RQKLRMRGLRCH MYCRNST MQ+VPLLASRSQALRYLFVRWRL+VANM+VILGE+GDT
Sbjct: 952 MRQKLRMRGLRCHLMYCRNSTSMQVVPLLASRSQALRYLFVRWRLSVANMYVILGETGDT 1011
Query: 998 DYEELISGAHKTLIMKGVVEKGSEELLRTTN--LRDDIVPSESPLIAHVNANAKVDEIAN 1055
DYEELISG HKTLIM+GVVEKGSEELLRT LRDD++P ++PLIA+ + AK + I
Sbjct: 1012 DYEELISGTHKTLIMRGVVEKGSEELLRTAGSYLRDDVIPQDTPLIAYADKGAKAEHIVE 1071
Query: 1056 ALRQVGKASV 1065
RQ+ KA +
Sbjct: 1072 TFRQLSKAGM 1081
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Craterostigma plantagineum (taxid: 4153) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|P31927|SPSA_MAIZE Sucrose-phosphate synthase OS=Zea mays GN=SPS PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1529 bits (3958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 759/1090 (69%), Positives = 886/1090 (81%), Gaps = 45/1090 (4%)
Query: 1 MAGNEWINGYLEAILDSGASA------IEEQQKQAPVNLAD-RG---HFNPTKYFVEEVV 50
MAGNEWINGYLEAILDS S+ ++P A RG +FNP+ YFVEEVV
Sbjct: 1 MAGNEWINGYLEAILDSHTSSRGAGGGGGGGDPRSPTKAASPRGAHMNFNPSHYFVEEVV 60
Query: 51 TSVDETDLYRTWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQRLANRRLER 110
VDE+DL+RTWIKVVATRN RERS+RLENMCWRIWHL RKKKQLE E +QR++ RR E+
Sbjct: 61 KGVDESDLHRTWIKVVATRNARERSTRLENMCWRIWHLARKKKQLELEGIQRISARRKEQ 120
Query: 111 EQGRRDVTEDMSEDLSEGEKGDGVGEIQTPDTPRKKFQRNFSNLEVWSDDKKEKKLYIVL 170
EQ RR+ TED++EDLSEGEKGD +GE+ +T +KKFQRNFS+L VWSDD KEKKLYIVL
Sbjct: 121 EQVRREATEDLAEDLSEGEKGDTIGELAPVETTKKKFQRNFSDLTVWSDDNKEKKLYIVL 180
Query: 171 ISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYG 230
IS+HGLVRGENMELGRDSDTGGQ+KYVVELARA++ MPGVYRVDLF+RQVSSP+VDWSYG
Sbjct: 181 ISVHGLVRGENMELGRDSDTGGQVKYVVELARAMSMMPGVYRVDLFTRQVSSPDVDWSYG 240
Query: 231 EPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNM 290
EP EML G +DG +GES GAYI+RIP GPRDKYL+KE LWPY+QEFVDGALAH LNM
Sbjct: 241 EPTEMLCAG-SNDGEGMGESGGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNM 299
Query: 291 SKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQG 350
SK LGEQ+G G+PV PYVIHGHYADAGD AALLSGALNVPMVLTGHSLGRNKLEQLLKQG
Sbjct: 300 SKALGEQVGNGRPVLPYVIHGHYADAGDVAALLSGALNVPMVLTGHSLGRNKLEQLLKQG 359
Query: 351 RQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARA 410
R SKE+I+STYKIMRRIEGEEL+LDA+ELVITST+QEIDEQWGLYDGFDVKLEKVLRARA
Sbjct: 360 RMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEIDEQWGLYDGFDVKLEKVLRARA 419
Query: 411 RRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSD 470
RRGV+CHGRYMPRMVVIPPGMDFSNVV ED + DG++ I G +G+SPK++P IW++
Sbjct: 420 RRGVSCHGRYMPRMVVIPPGMDFSNVVVHEDI-DGDGDVKDDIVGLEGASPKSMPPIWAE 478
Query: 471 VMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSG 530
VMRFLTNPHKPMILALSRPDPKKNITTL+KAFGECRPLRELANLTLIMGNRDDI++MS+G
Sbjct: 479 VMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDDMSAG 538
Query: 531 NASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLI 590
NASVL TVLKLIDKYDLYG VA+PKHH Q DVPEIYRLAAK KGVFINPALVEPFGLTLI
Sbjct: 539 NASVLTTVLKLIDKYDLYGSVAFPKHHNQADVPEIYRLAAKMKGVFINPALVEPFGLTLI 598
Query: 591 EAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGW 650
EAAAHGLP+VATKNGGPVDI ALNNGLLVDPHDQ AIADALLKLV++KNLW ECR+NG
Sbjct: 599 EAAAHGLPIVATKNGGPVDITNALNNGLLVDPHDQNAIADALLKLVADKNLWQECRRNGL 658
Query: 651 KNIHLFSWPEHCRTYLTRVAACRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMSLRLS 710
+NIHL+SWPEHCRTYLTRVA CR+R+P+W DTP D A EE DS+ D QD+SLRLS
Sbjct: 659 RNIHLYSWPEHCRTYLTRVAGCRLRNPRWLKDTPADAGADEEEFLEDSM-DAQDLSLRLS 717
Query: 711 VDGDKSSLNGSLDYTAASSGDPV----QDQVKRVLSKIKK-----PDSDSNDKEAEKKLL 761
+DG+KSSLN + DP+ QDQV+++++ IK+ P S E
Sbjct: 718 IDGEKSSLN---------TNDPLWFDPQDQVQKIMNNIKQSSALPPSMSSVAAEGTG--- 765
Query: 762 ENVVSKYPMLRRRRRLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALS 821
+ ++KYP+LRRRRRL VIA+DCY G KKM+Q++ +VF+AVR D Q +++GF LS
Sbjct: 766 -STMNKYPLLRRRRRLFVIAVDCYQDDGRASKKMLQVIQEVFRAVRSDSQMFKISGFTLS 824
Query: 822 TAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPGTYT--EEGGKLFPDPDYASHIDY 879
TAMP+SET++ L KI A +FDALIC SG E+YYPGT + GKL PD DY HI +
Sbjct: 825 TAMPLSETLQLLQLGKIPATDFDALICGSGSEVYYPGTANCMDAEGKLRPDQDYLMHISH 884
Query: 880 RWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDLR 939
RW DG ++TI KLM +G S +++D SSNAHC+++LIKDP K + +D++R
Sbjct: 885 RWSHDGARQTIAKLMGAQDG------SGDAVEQDVASSNAHCVAFLIKDPQKVKTVDEMR 938
Query: 940 QKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDY 999
++LRMRGLRCH MYCRNSTR+Q+VPLLASRSQALRYL VRW ++V NM++I GE GDTD
Sbjct: 939 ERLRMRGLRCHIMYCRNSTRLQVVPLLASRSQALRYLSVRWGVSVGNMYLITGEHGDTDL 998
Query: 1000 EELISGAHKTLIMKGVVEKGSEELLRT--TNLRDDIVPSESPLIAHVNANAKVDEIANAL 1057
EE++SG HKT+I++GV EKGSE L+R+ + RDD+VPSE+PL A+ K DEI AL
Sbjct: 999 EEMLSGLHKTVIVRGVTEKGSEALVRSPGSYKRDDVVPSETPLAAYTTGELKADEIMRAL 1058
Query: 1058 RQVGKASVGM 1067
+QV K S GM
Sbjct: 1059 KQVSKTSSGM 1068
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Zea mays (taxid: 4577) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|Q0JGK4|SPSA1_ORYSJ Probable sucrose-phosphate synthase 1 OS=Oryza sativa subsp. japonica GN=SPS1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 1483 bits (3840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 754/1110 (67%), Positives = 881/1110 (79%), Gaps = 69/1110 (6%)
Query: 1 MAGNEWINGYLEAILDSGASAIE-----------------------EQQKQAPVNLADRG 37
MAGNEWINGYLEAILDSG +A + + A + RG
Sbjct: 1 MAGNEWINGYLEAILDSGGAAGGGGGGGGGGGGGGGGGGGGGGGGVDPRSPAAGAASPRG 60
Query: 38 ---HFNPTKYFVEEVVTSVDETDLYRTWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQ 94
+FNPT YFVEEVV VDE+DL+RTWIKVVATRN RERS+RLENMCWRIWHL RKKKQ
Sbjct: 61 PHMNFNPTHYFVEEVVKGVDESDLHRTWIKVVATRNARERSTRLENMCWRIWHLARKKKQ 120
Query: 95 LEWEELQRLANRRLEREQGRRDVTEDMSEDLSEGEKGDGVGEIQTPDTP-RKKFQRNFSN 153
LE E + R++ RR E+EQ RR+ +ED++EDL EGEK D VGE+ DTP +KKFQRNFS
Sbjct: 121 LELEGILRISARRKEQEQVRRETSEDLAEDLFEGEKADTVGELAQQDTPMKKKFQRNFSE 180
Query: 154 LEV-WSDDKKEKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYR 212
L V WSD+ KEKKLYIVLISLHGLVRG+NMELGRDSDTGGQ+KYVVELARALA MPGVYR
Sbjct: 181 LTVSWSDENKEKKLYIVLISLHGLVRGDNMELGRDSDTGGQVKYVVELARALAMMPGVYR 240
Query: 213 VDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKELL 272
VDLF+RQVSSPEVDWSYGEP EMLT G DG GES+GAYI+RIP GPRDKYLRKE L
Sbjct: 241 VDLFTRQVSSPEVDWSYGEPTEMLTSG-STDGEGSGESAGAYIVRIPCGPRDKYLRKEAL 299
Query: 273 WPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMV 332
WPY+QEFVDGALAH LNMSK LGEQ+ G+ V PYVIHGHYADAGD AALLSGALNVPMV
Sbjct: 300 WPYLQEFVDGALAHILNMSKALGEQVSNGKLVLPYVIHGHYADAGDVAALLSGALNVPMV 359
Query: 333 LTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQW 392
LTGHSLGRNKLEQ++KQGR SKE+I+STYKIMRRIEGEEL+LDAAELVITST+QEIDEQW
Sbjct: 360 LTGHSLGRNKLEQIMKQGRMSKEEIDSTYKIMRRIEGEELALDAAELVITSTRQEIDEQW 419
Query: 393 GLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSL 452
GLYDGFDVKLEKVLRARARRGV+CHGR+MPRMVVIPPGMDFS+VV EDT +
Sbjct: 420 GLYDGFDVKLEKVLRARARRGVSCHGRFMPRMVVIPPGMDFSSVVVPEDTSD-------- 471
Query: 453 IGGTDG-----SSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRP 507
G DG +SP+++P IW++VMRFLTNPHKPMILALSRPDPKKNITTL+KAFGECRP
Sbjct: 472 --GDDGKDFEIASPRSLPPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRP 529
Query: 508 LRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYR 567
LRELANL LIMGNRDDI+EMS+GNASVL TVLKLIDKYDLYG VA+PKHHKQ DVPEIYR
Sbjct: 530 LRELANLILIMGNRDDIDEMSAGNASVLTTVLKLIDKYDLYGSVAFPKHHKQSDVPEIYR 589
Query: 568 LAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQA 627
L K KGVFINPALVEPFGLTLIEAAAHGLP+VATKNGGPVDI ALNNGLLVDPHDQ A
Sbjct: 590 LTGKMKGVFINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDIKNALNNGLLVDPHDQHA 649
Query: 628 IADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRMRHPQWQTDTPVDE 687
IADALLKLV++KNLW ECRKNG +NI L+SWPEHCRTYLTR+A CR+R+P+W DTP D
Sbjct: 650 IADALLKLVADKNLWQECRKNGLRNIQLYSWPEHCRTYLTRIAGCRIRNPRWLMDTPADA 709
Query: 688 MAAEESSFNDSLKDVQDMSLRLSVDGDK-SSLNGSLDYTAASSGDPVQDQVKRVLSKIKK 746
A EE + DSL DVQD+SLRLS+DG++ SS+N A S DP QD V+R+++KIK+
Sbjct: 710 AAEEEEALEDSLMDVQDLSLRLSIDGERGSSMND------APSSDP-QDSVQRIMNKIKR 762
Query: 747 PDSDSND-----KEAEKKLLENVVSKYPMLRRRRRLIVIALDCYDSKGAPDKKMIQIMYD 801
D EA ++KYP+LRRRRRL VIA+DCY G+ K+M+Q++ +
Sbjct: 763 SSPADTDGAKIPAEAAATATSGAMNKYPLLRRRRRLFVIAVDCYGDDGSASKRMLQVIQE 822
Query: 802 VFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPGT-- 859
VF+AVR D Q +R++GFALSTAMP+ ET++ L KI +FDALIC SG E+YYP T
Sbjct: 823 VFRAVRSDSQMSRISGFALSTAMPLPETLKLLQLGKIPPTDFDALICGSGSEVYYPSTAQ 882
Query: 860 YTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNA 919
+ GG+L PD DY HI++RW DG K+TI KL + G + ++ D +S N
Sbjct: 883 CVDAGGRLRPDQDYLLHINHRWSHDGAKQTIAKLAHDGSG--------TNVEPDVESCNP 934
Query: 920 HCISYLIKDPSKARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVR 979
HC+S+ IKDP+K R ID++R+++RMRGLRCH MYCRN+TR+Q+VPLLASRSQALRYLFVR
Sbjct: 935 HCVSFFIKDPNKVRTIDEMRERVRMRGLRCHLMYCRNATRLQVVPLLASRSQALRYLFVR 994
Query: 980 WRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTTN--LRDDIVPSE 1037
W L+V NM++I+GE GDTD+EE++SG HKT+I++GV EKGSE+L+R++ R+D+VPSE
Sbjct: 995 WGLSVGNMYLIVGEHGDTDHEEMLSGLHKTVIIRGVTEKGSEQLVRSSGSYQREDVVPSE 1054
Query: 1038 SPLIAHVNANAKVDEIANALRQVGKASVGM 1067
SPLIA + K DEI AL++V KA+ GM
Sbjct: 1055 SPLIAFTKGDLKADEIMRALKEVTKAASGM 1084
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|A2WYE9|SPSA1_ORYSI Probable sucrose-phosphate synthase 1 OS=Oryza sativa subsp. indica GN=SPS1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 1483 bits (3840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 754/1110 (67%), Positives = 881/1110 (79%), Gaps = 69/1110 (6%)
Query: 1 MAGNEWINGYLEAILDSGASAIE-----------------------EQQKQAPVNLADRG 37
MAGNEWINGYLEAILDSG +A + + A + RG
Sbjct: 1 MAGNEWINGYLEAILDSGGAAGGGGGGGGGGGGGGGGGGGGGGGGVDPRSPAAGAASPRG 60
Query: 38 ---HFNPTKYFVEEVVTSVDETDLYRTWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQ 94
+FNPT YFVEEVV VDE+DL+RTWIKVVATRN RERS+RLENMCWRIWHL RKKKQ
Sbjct: 61 PHMNFNPTHYFVEEVVKGVDESDLHRTWIKVVATRNARERSTRLENMCWRIWHLARKKKQ 120
Query: 95 LEWEELQRLANRRLEREQGRRDVTEDMSEDLSEGEKGDGVGEIQTPDTP-RKKFQRNFSN 153
LE E + R++ RR E+EQ RR+ +ED++EDL EGEK D VGE+ DTP +KKFQRNFS
Sbjct: 121 LELEGILRISARRKEQEQVRRETSEDLAEDLFEGEKADTVGELAQQDTPMKKKFQRNFSE 180
Query: 154 LEV-WSDDKKEKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYR 212
L V WSD+ KEKKLYIVLISLHGLVRG+NMELGRDSDTGGQ+KYVVELARALA MPGVYR
Sbjct: 181 LTVSWSDENKEKKLYIVLISLHGLVRGDNMELGRDSDTGGQVKYVVELARALAMMPGVYR 240
Query: 213 VDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKELL 272
VDLF+RQVSSPEVDWSYGEP EMLT G DG GES+GAYI+RIP GPRDKYLRKE L
Sbjct: 241 VDLFTRQVSSPEVDWSYGEPTEMLTSG-STDGEGSGESAGAYIVRIPCGPRDKYLRKEAL 299
Query: 273 WPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMV 332
WPY+QEFVDGALAH LNMSK LGEQ+ G+ V PYVIHGHYADAGD AALLSGALNVPMV
Sbjct: 300 WPYLQEFVDGALAHILNMSKALGEQVSNGKLVLPYVIHGHYADAGDVAALLSGALNVPMV 359
Query: 333 LTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQW 392
LTGHSLGRNKLEQ++KQGR SKE+I+STYKIMRRIEGEEL+LDAAELVITST+QEIDEQW
Sbjct: 360 LTGHSLGRNKLEQIMKQGRMSKEEIDSTYKIMRRIEGEELALDAAELVITSTRQEIDEQW 419
Query: 393 GLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSL 452
GLYDGFDVKLEKVLRARARRGV+CHGR+MPRMVVIPPGMDFS+VV EDT +
Sbjct: 420 GLYDGFDVKLEKVLRARARRGVSCHGRFMPRMVVIPPGMDFSSVVVPEDTSD-------- 471
Query: 453 IGGTDG-----SSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRP 507
G DG +SP+++P IW++VMRFLTNPHKPMILALSRPDPKKNITTL+KAFGECRP
Sbjct: 472 --GDDGKDFEIASPRSLPPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRP 529
Query: 508 LRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYR 567
LRELANL LIMGNRDDI+EMS+GNASVL TVLKLIDKYDLYG VA+PKHHKQ DVPEIYR
Sbjct: 530 LRELANLILIMGNRDDIDEMSAGNASVLTTVLKLIDKYDLYGSVAFPKHHKQSDVPEIYR 589
Query: 568 LAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQA 627
L K KGVFINPALVEPFGLTLIEAAAHGLP+VATKNGGPVDI ALNNGLLVDPHDQ A
Sbjct: 590 LTGKMKGVFINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDIKNALNNGLLVDPHDQHA 649
Query: 628 IADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRMRHPQWQTDTPVDE 687
IADALLKLV++KNLW ECRKNG +NI L+SWPEHCRTYLTR+A CR+R+P+W DTP D
Sbjct: 650 IADALLKLVADKNLWQECRKNGLRNIQLYSWPEHCRTYLTRIAGCRIRNPRWLMDTPADA 709
Query: 688 MAAEESSFNDSLKDVQDMSLRLSVDGDK-SSLNGSLDYTAASSGDPVQDQVKRVLSKIKK 746
A EE + DSL DVQD+SLRLS+DG++ SS+N A S DP QD V+R+++KIK+
Sbjct: 710 AAEEEEALEDSLMDVQDLSLRLSIDGERGSSMND------APSSDP-QDSVQRIMNKIKR 762
Query: 747 PDSDSND-----KEAEKKLLENVVSKYPMLRRRRRLIVIALDCYDSKGAPDKKMIQIMYD 801
D EA ++KYP+LRRRRRL VIA+DCY G+ K+M+Q++ +
Sbjct: 763 SSPADTDGAKIPAEAAATATSGAMNKYPLLRRRRRLFVIAVDCYGDDGSASKRMLQVIQE 822
Query: 802 VFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPGT-- 859
VF+AVR D Q +R++GFALSTAMP+ ET++ L KI +FDALIC SG E+YYP T
Sbjct: 823 VFRAVRSDSQMSRISGFALSTAMPLPETLKLLQLGKIPPTDFDALICGSGSEVYYPSTAQ 882
Query: 860 YTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNA 919
+ GG+L PD DY HI++RW DG K+TI KL + G + ++ D +S N
Sbjct: 883 CVDAGGRLRPDQDYLLHINHRWSHDGAKQTIAKLAHDGSG--------TNVEPDVESCNP 934
Query: 920 HCISYLIKDPSKARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVR 979
HC+S+ IKDP+K R ID++R+++RMRGLRCH MYCRN+TR+Q+VPLLASRSQALRYLFVR
Sbjct: 935 HCVSFFIKDPNKVRTIDEMRERVRMRGLRCHLMYCRNATRLQVVPLLASRSQALRYLFVR 994
Query: 980 WRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTTN--LRDDIVPSE 1037
W L+V NM++I+GE GDTD+EE++SG HKT+I++GV EKGSE+L+R++ R+D+VPSE
Sbjct: 995 WGLSVGNMYLIVGEHGDTDHEEMLSGLHKTVIIRGVTEKGSEQLVRSSGSYQREDVVPSE 1054
Query: 1038 SPLIAHVNANAKVDEIANALRQVGKASVGM 1067
SPLIA + K DEI AL++V KA+ GM
Sbjct: 1055 SPLIAFTKGDLKADEIMRALKEVTKAASGM 1084
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Oryza sativa subsp. indica (taxid: 39946) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|P31928|SPSA_SPIOL Sucrose-phosphate synthase OS=Spinacia oleracea GN=SPS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1246 bits (3223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/1081 (57%), Positives = 802/1081 (74%), Gaps = 53/1081 (4%)
Query: 1 MAGNEWINGYLEAILDSGASAIEE---QQKQAPVNLA--DRGHFNPTKYFVEEVVTSVDE 55
MAGN+WIN YLEAILD G I+ + AP +L +RGHF+P++YFVEEV++ DE
Sbjct: 1 MAGNDWINSYLEAILDVGGQGIDASTGKTSTAPPSLLLRERGHFSPSRYFVEEVISGFDE 60
Query: 56 TDLYRTWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQRLANRRLEREQGRR 115
TDL+R+W++ +TR+ +ER++RLEN+CWRIW+L RKKKQ+E EE QRLA R +ERE+GRR
Sbjct: 61 TDLHRSWVRAASTRSPQERNTRLENLCWRIWNLARKKKQIEGEEAQRLAKRHVERERGRR 120
Query: 116 DVTEDMSEDLSEGEKGDGVGEIQTPDTPRKKFQRNFSNLEV---WSDDKKEKKLYIVLIS 172
+ T DMSEDLSEGE+GD V ++ K R S++E+ W++ KEKKLY+VLIS
Sbjct: 121 EATADMSEDLSEGERGDTVADMLFASESTKGRMRRISSVEMMDNWANTFKEKKLYVVLIS 180
Query: 173 LHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEP 232
LHGL+RGENMELGRDSDTGGQ+KYVVELARAL MPGVYRVDL +RQVS+P VDWSYGEP
Sbjct: 181 LHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPGVDWSYGEP 240
Query: 233 AEMLTGGPEDDGIE-VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMS 291
EML+ ++ E +GESSGAYIIRIPFGP+DKY+ KELLWPYI EFVDGAL+H MS
Sbjct: 241 TEMLSSRNSENSTEQLGESSGAYIIRIPFGPKDKYVAKELLWPYIPEFVDGALSHIKQMS 300
Query: 292 KVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGR 351
KVLGEQIGGG PVWP +HGHYADAGDSAALLSGALNVPMV TGHSLGR+KL+QLLKQGR
Sbjct: 301 KVLGEQIGGGLPVWPASVHGHYADAGDSAALLSGALNVPMVFTGHSLGRDKLDQLLKQGR 360
Query: 352 QSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARAR 411
S+E++++TYKIMRRIE EEL LDA+E+VITST+QEI+EQW LY GFD+ LE+ LRAR R
Sbjct: 361 LSREEVDATYKIMRRIEAEELCLDASEIVITSTRQEIEEQWQLYHGFDLVLERKLRARMR 420
Query: 412 RGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDV 471
RGV+CHGR+MPRM IPPGM+F+++ PE D ++ + I G S+ P IWS++
Sbjct: 421 RGVSCHGRFMPRMAKIPPGMEFNHI-----APE-DADMDTDIDGHKESNANPDPVIWSEI 474
Query: 472 MRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGN 531
MRF +N KPMILAL+RPDPKKN+TTL+KAFGECRPLRELANLTLI+GNRDDI+EMS+ +
Sbjct: 475 MRFFSNGRKPMILALARPDPKKNLTTLVKAFGECRPLRELANLTLIIGNRDDIDEMSTTS 534
Query: 532 ASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIE 591
+SVLI++LKLIDKYDLYGQVAYPKHHKQ DVP+IYRLAAKTKGVFINPA +EPFGLTLIE
Sbjct: 535 SSVLISILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIE 594
Query: 592 AAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWK 651
AAA+GLP+VATKNGGPVDI L+NGLL+DPHDQ++IADALLKLV++K+LW +CR+NG K
Sbjct: 595 AAAYGLPIVATKNGGPVDIIGVLDNGLLIDPHDQKSIADALLKLVADKHLWTKCRQNGLK 654
Query: 652 NIHLFSWPEHCRTYLTRVAACRMRHPQWQTDTPVDEMA--AEESSFNDSLKDVQDMS--L 707
NIHLFSWPEHC+ YL+R+A+C+ R P WQ +DE + ++ S DSL+D+QD+S L
Sbjct: 655 NIHLFSWPEHCKNYLSRIASCKPRQPNWQR---IDEGSENSDTDSAGDSLRDIQDISLNL 711
Query: 708 RLSVDGDKS----SLNGSLDYTAASSGDPVQDQVKRVLSKIKKPDSDSNDKEAEKKLLEN 763
+LS+D +++ S + SLD A++ +++ V ++ + K D +
Sbjct: 712 KLSLDAERTEGGNSFDDSLDSEEANAKRKIENAVAKLSKSMDKAQVDVGNL--------- 762
Query: 764 VVSKYPMLRRRRRLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTA 823
K+P +RRR+ + VIALDC + ++Q++ V V T + GF LST+
Sbjct: 763 ---KFPAIRRRKCIFVIALDCDVT-----SDLLQVIKTVISIVGEQRPTGSI-GFILSTS 813
Query: 824 MPVSETIEFLNSMKIEANEFDALICSSGGEMYYPGT-YTEEGGKLFPDPDYASHIDYRWG 882
M +SE L+S + +FDA IC+SG E+YYP T Y+E L D DY SHIDYRWG
Sbjct: 814 MTLSEVDSLLDSGGLRPADFDAFICNSGSELYYPSTDYSESPFVL--DQDYYSHIDYRWG 871
Query: 883 CDGLKKTI--WKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDLRQ 940
+GL KT+ W + GEN+ N + D+ SS HC ++ + D + A +LR+
Sbjct: 872 GEGLWKTLVKWAASVNEKKGENAPNI---VIADETSSTTHCYAFKVNDFTLAPPAKELRK 928
Query: 941 KLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYE 1000
+R++ LRCH +YC+N TR+ ++P+LASRSQALRYLF+RW + ++N V +GESGDTDYE
Sbjct: 929 MMRIQALRCHAIYCQNGTRLNVIPVLASRSQALRYLFMRWGVELSNFVVFVGESGDTDYE 988
Query: 1001 ELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQV 1060
L+ G HKT+I+KG+ S + ++P +SP + +D+I++AL ++
Sbjct: 989 GLLGGVHKTVILKGIGSNTSNFHATRAYPMEHVMPVDSPNMFQT-GGCNIDDISDALSKI 1047
Query: 1061 G 1061
G
Sbjct: 1048 G 1048
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Spinacia oleracea (taxid: 3562) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|O22060|SPSA1_CITUN Probable sucrose-phosphate synthase 1 OS=Citrus unshiu GN=SPS1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1237 bits (3200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 632/1075 (58%), Positives = 801/1075 (74%), Gaps = 36/1075 (3%)
Query: 1 MAGNEWINGYLEAILDSGASAIEEQQKQAPVNLADRGHFNPTKYFVEEVVTSVDETDLYR 60
MAGN+WIN YLEAILD G ++ + L +RG F+PT+YFVEEV+T DETDL+R
Sbjct: 1 MAGNDWINSYLEAILDVGPGL---DDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHR 57
Query: 61 TWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQRLANRRLEREQGRRDVTED 120
+W+K ATR+ +ER++RLENMCWRIW+L R+KKQLE E QR+A RRLERE+GRR+ T D
Sbjct: 58 SWVKAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATAD 117
Query: 121 MSEDLSEGEKGDGVGEIQTP-DTPRKKFQR--NFSNLEVWSDDKKEKKLYIVLISLHGLV 177
MSEDLSEGEKGD V ++ D+ R + R + +E W +K KKLYIVLIS+HGL+
Sbjct: 118 MSEDLSEGEKGDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKGKKLYIVLISIHGLI 177
Query: 178 RGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLT 237
RGENMELGRDSDTGGQ+KYVVELARAL MPGVYRVDL +RQVS+P+VDWSYGEP EMLT
Sbjct: 178 RGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLT 237
Query: 238 GGPEDDGIE-VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGE 296
DD ++ +GESSGAYIIRIPFGP+DKY+ KELLWP+I EFVDGAL H + MS VLGE
Sbjct: 238 PRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGE 297
Query: 297 QIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKED 356
QIGGG+PVWP IHGHYADAGDSAALLSGALNVPM+ TGHSLGR+KLEQLLKQ R S+++
Sbjct: 298 QIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDE 357
Query: 357 INSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNC 416
IN+TYKIMRRIE EELSLDA+E+VITST+QEI+EQW LYDGFD LE+ LRAR +R V+C
Sbjct: 358 INATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSC 417
Query: 417 HGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLT 476
+G++MPRM +IPPGM+F ++V Q DG++ G + + P IWS++MRF T
Sbjct: 418 YGKFMPRMAIIPPGMEFHHIVPQ------DGDMDGETEGNEDNPASPDPPIWSEIMRFFT 471
Query: 477 NPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLI 536
NP KP+ILAL+RPDPKKNITTL+KAFGECRPLRELANLTLIMGNRD I+EMSS +ASVL+
Sbjct: 472 NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLL 531
Query: 537 TVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHG 596
+VLKLIDKYDLYGQVAYPKHHKQ DVPEIYRLAAKTKGVFINPA +EPFGLTLIEAAAHG
Sbjct: 532 SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 591
Query: 597 LPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLF 656
LP+VATKNGGPVDIHR L+NGLLVDPHDQQ+IADALLKLV+ K LW CR+NG KNIHLF
Sbjct: 592 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVAGKQLWARCRQNGLKNIHLF 651
Query: 657 SWPEHCRTYLTRVAACRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMSLRL--SVDGD 714
SWPEHC+TYL+R+A C+ RHPQWQ E +E S DSL+D+QD+SL L S+DG+
Sbjct: 652 SWPEHCKTYLSRIAGCKPRHPQWQRTDDGGE-TSESDSPGDSLRDIQDISLNLKFSLDGE 710
Query: 715 KSSLNGSLDYTAASSGDPVQDQVKR----VLSKIKKPDSDSNDKEAEKKLLENV-VSKYP 769
KS +G+ D + S G+ V D+ R VL+ K D+ + K+ +N +K+P
Sbjct: 711 KSGASGN-DDSLDSEGN-VADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFP 768
Query: 770 MLRRRRRLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSET 829
LRRR+ + VI++DC + G ++ + +AV + + GF LST+M +SE
Sbjct: 769 ALRRRKHIFVISVDCDSTTG-----LLDATKKICEAVEKERTEGSI-GFILSTSMTISEI 822
Query: 830 IEFLNSMKIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKT 889
FL S + ++FDA IC+SG ++YY T E G D Y SHI+YRWG +GL+KT
Sbjct: 823 HSFLVSGHLSPSDFDAFICNSGSDLYY-STLNSEDGPFVVDFYYHSHIEYRWGGEGLRKT 881
Query: 890 I--WKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDLRQKLRMRGL 947
+ W T + E+ + +P + Q S+N +C ++ ++ P + +LR+ LR++ L
Sbjct: 882 LVRWASQVTDKKAESGEKVLTPAE--QLSTN-YCYAFSVQKPGMTPPVKELRKVLRIQAL 938
Query: 948 RCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAH 1007
RCH +YC+N +R+ ++P+LASRSQALRYL++RW + ++ M V +GESGDTDYE L+ G H
Sbjct: 939 RCHVIYCQNGSRVNVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVH 998
Query: 1008 KTLIMKGVVEKGSEELLRTTNL-RDDIVPSESPLIAHVNANAKVDEIANALRQVG 1061
KT+I+KG+ S ++ + D++P +SP I + +I ++L Q+G
Sbjct: 999 KTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 1053
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Citrus unshiu (taxid: 55188) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|Q43845|SPSA_SOLTU Probable sucrose-phosphate synthase OS=Solanum tuberosum GN=SPS PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1205 bits (3118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 618/1076 (57%), Positives = 788/1076 (73%), Gaps = 42/1076 (3%)
Query: 1 MAGNEWINGYLEAILDSGASAIEEQQKQAPVNLADRGHFNPTKYFVEEVVTSVDETDLYR 60
MAGN+WIN YLEAILD G K++ + L +RG F+PT+YFVEEV+T DETDL+R
Sbjct: 1 MAGNDWINSYLEAILDVGPGL---DDKKSSLLLRERGRFSPTRYFVEEVITGFDETDLHR 57
Query: 61 TWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQRLANRRLEREQGRRDVTED 120
+WI+ ATR+ + R++RLENMCWRIW+L R+KKQLE E+ Q +A RR ERE+GRR+ D
Sbjct: 58 SWIRAQATRSPQRRNTRLENMCWRIWNLARQKKQLEGEQAQWMAKRRQERERGRREAVAD 117
Query: 121 MSEDLSEGEKGDGVGEIQTP-DTPRKKFQR--NFSNLEVWSDDKKEKKLYIVLISLHGLV 177
MSEDLSEGEKGD V ++ + ++ R + R + +E W ++ KKLYIVLISLHGL+
Sbjct: 118 MSEDLSEGEKGDIVADMSSHGESTRGRLPRISSVETMEAWVSQQRGKKLYIVLISLHGLI 177
Query: 178 RGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLT 237
RGENMELGRDSDTGGQ+KYVVELARAL MPGVYRVDL +RQVSSPEVDWSYGEP E+
Sbjct: 178 RGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPEVDWSYGEPTELAP 237
Query: 238 GGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQ 297
+ E+GESSGAYIIRIPFGPR+KY+ KE LWPYI EFVDGAL H + MSKVLGEQ
Sbjct: 238 ISTDGLMTEMGESSGAYIIRIPFGPREKYIPKEQLWPYIPEFVDGALNHIIQMSKVLGEQ 297
Query: 298 IGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDI 357
IG G PVWP IHGHYADAGDSAALLSGALNVPM+ TGHSLGR+KLEQLL QGR+SK++I
Sbjct: 298 IGSGYPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLAQGRKSKDEI 357
Query: 358 NSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCH 417
NSTYKIMRRIE EEL+LDA+E+VITST+QEIDEQW LYDGFD LE+ LRAR +R V+C+
Sbjct: 358 NSTYKIMRRIEAEELTLDASEIVITSTRQEIDEQWRLYDGFDPILERKLRARIKRNVSCY 417
Query: 418 GRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTN 477
GR+MPRM VIPPGM+F ++V E ++DGE G DG +P P IW+++MRF +N
Sbjct: 418 GRFMPRMAVIPPGMEFHHIVPHEG--DMDGETE---GSEDGKTPD--PPIWAEIMRFFSN 470
Query: 478 PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLIT 537
P KPMILAL+RPDPKKN+TTL+KAFGECRPLR+LANLTLIMGNRD+I+EMSS N+++L++
Sbjct: 471 PRKPMILALARPDPKKNLTTLVKAFGECRPLRDLANLTLIMGNRDNIDEMSSTNSALLLS 530
Query: 538 VLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGL 597
+LK+IDKYDLYGQVAYPKHHKQ DVP+IYRLAAKTKGVFINPA +EPFGLTLIEAAA+GL
Sbjct: 531 ILKMIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGL 590
Query: 598 PMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFS 657
PMVATKNGGPVDIHR L+NGLLVDPHDQQAIADALLKLV++K LW +CR NG KNIHLFS
Sbjct: 591 PMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQLWAKCRANGLKNIHLFS 650
Query: 658 WPEHCRTYLTRVAACRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMS--LRLSVDGDK 715
WPEHC+TYL+R+A+C+ R P+W D+ +E S +DSL+D+ D+S LR S+DG+K
Sbjct: 651 WPEHCKTYLSRIASCKPRQPRWLRSIDDDDENSETDSPSDSLRDIHDISLNLRFSLDGEK 710
Query: 716 SSLNGSLDYTAASSGDPVQDQVKR------VLSKIKKPDSDSNDKEAEKKLLENV-VSKY 768
+ + D T DP +V+R VLS K ++ + K +N K+
Sbjct: 711 NDNKENADNTL----DP---EVRRSKLENAVLSLSKGALKSTSKSWSSDKADQNPGAGKF 763
Query: 769 PMLRRRRRLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSE 828
P +RRRR + VIA+DC S G + + +F+AV + + GF L+T+ +SE
Sbjct: 764 PAIRRRRHIFVIAVDCDASSG-----LSGSVKKIFEAVEKERAEGSI-GFILATSFNISE 817
Query: 829 TIEFLNSMKIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKK 888
FL S + +FDA IC+SGG++YY ++E+ D Y SHI+YRWG +GL+K
Sbjct: 818 VQSFLLSEGMNPTDFDAYICNSGGDLYYSSFHSEQ-NPFVVDLYYHSHIEYRWGGEGLRK 876
Query: 889 TI--WKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDLRQKLRMRG 946
T+ W + GEN + + ED+ +S +C ++ + P +LR+ +R++
Sbjct: 877 TLVRWAASIIDKNGENGDHI---VVEDEDNSADYCYTFKVCKPGTVPPSKELRKVMRIQA 933
Query: 947 LRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGA 1006
LRCH +YC+N +R+ ++P+LASRSQALRYL++RW ++++ + V +GESGDTDYE LI G
Sbjct: 934 LRCHAVYCQNGSRINVIPVLASRSQALRYLYLRWGMDLSKLVVFVGESGDTDYEGLIGGL 993
Query: 1007 HKTLIMKGVVEKGSEELLRTTNL-RDDIVPSESPLIAHVNANAKVDEIANALRQVG 1061
K +IMKG+ S + N D++P +SP + + EI L ++
Sbjct: 994 RKAVIMKGLCTNASSLIHGNRNYPLSDVLPFDSPNVIQADEECSSTEIRCLLEKLA 1049
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Solanum tuberosum (taxid: 4113) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|F4JLK2|SPSA4_ARATH Probable sucrose-phosphate synthase 4 OS=Arabidopsis thaliana GN=SPS4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1201 bits (3107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 619/1092 (56%), Positives = 772/1092 (70%), Gaps = 75/1092 (6%)
Query: 1 MAGNEWINGYLEAILDSGASAIEE-------QQKQAPVNLAD-----------RGH---- 38
MA N+WIN YLEAILD G S + QK +N D + H
Sbjct: 1 MARNDWINSYLEAILDVGTSKKKRFESNSKIVQKLGDINSKDHQEKVFGDMNGKDHQEKV 60
Query: 39 FNPTKYFVEEVVTSVDETDLYRTWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWE 98
F+P KYFVEEVV S DE+DLY+TWIKV+ATRNTRERS+RLEN+CWRIWHL RKKKQ+ W+
Sbjct: 61 FSPIKYFVEEVVNSFDESDLYKTWIKVIATRNTRERSNRLENICWRIWHLARKKKQIVWD 120
Query: 99 ELQRLANRRLEREQGRRDVTEDMSEDLSEGEKGDGVGE------IQTPDTPRKKFQRNFS 152
+ RL+ RR+EREQGR D ED+ +LSEGEK GE + T + PR R S
Sbjct: 121 DGVRLSKRRIEREQGRNDAEEDLLSELSEGEKDKNDGEKEKSEVVTTLEPPRDHMPRIRS 180
Query: 153 NLEVWS-DDKKEKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVY 211
+++WS DDK + LYIVLIS+HGLVRGENMELGRDSDTGGQ+KYVVELARALA GV+
Sbjct: 181 EMQIWSEDDKSSRNLYIVLISMHGLVRGENMELGRDSDTGGQVKYVVELARALANTEGVH 240
Query: 212 RVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKEL 271
RVDL +RQ+SSPEVD+SYGEP EML+ PE +S G+YIIRIP G RDKY+ KE
Sbjct: 241 RVDLLTRQISSPEVDYSYGEPVEMLSCPPEG-----SDSCGSYIIRIPCGSRDKYIPKES 295
Query: 272 LWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPM 331
LWP+I EFVDGAL H +++++ LGEQ+ GG+P+WPYVIHGHYADAG+ AA L+GALNVPM
Sbjct: 296 LWPHIPEFVDGALNHIVSIARSLGEQVNGGKPIWPYVIHGHYADAGEVAAHLAGALNVPM 355
Query: 332 VLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQ 391
VLTGHSLGRNK EQLL+QGR ++EDI+ TYKIMRRIE EE SLDAAE+V+TST+QEID Q
Sbjct: 356 VLTGHSLGRNKFEQLLQQGRITREDIDRTYKIMRRIEAEEQSLDAAEMVVTSTRQEIDAQ 415
Query: 392 WGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTS 451
WGLYDGFD+KLE+ LR R RRGV+C GRYMPRMVVIPPGMDFS V+ Q D+ E DG+L S
Sbjct: 416 WGLYDGFDIKLERKLRVRRRRGVSCLGRYMPRMVVIPPGMDFSYVLTQ-DSQEPDGDLKS 474
Query: 452 LIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLREL 511
LIG K +P IWS++MRF +NPHKP ILALSRPD KKN+TTL+KAFGEC+PLREL
Sbjct: 475 LIGPDRNQIKKPVPPIWSEIMRFFSNPHKPTILALSRPDHKKNVTTLVKAFGECQPLREL 534
Query: 512 ANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAK 571
ANL LI+GNRDDIEEM + ++ VL+ VLKLID+YDLYGQVAYPKHHKQ +VP+IYRLAAK
Sbjct: 535 ANLVLILGNRDDIEEMPNSSSVVLMNVLKLIDQYDLYGQVAYPKHHKQSEVPDIYRLAAK 594
Query: 572 TKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADA 631
TKGVFINPALVEPFGLTLIEAAA+GLP+VAT+NGGPVDI +ALNNGLLVDPHDQQAI+DA
Sbjct: 595 TKGVFINPALVEPFGLTLIEAAAYGLPIVATRNGGPVDIVKALNNGLLVDPHDQQAISDA 654
Query: 632 LLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRMRHPQWQTDTPVDEMAAE 691
LLKLV+ K+LW ECRKNG KNIH FSWPEHCR YL+ V CR RHP + +D M
Sbjct: 655 LLKLVANKHLWAECRKNGLKNIHRFSWPEHCRNYLSHVEHCRNRHPT----SSLDIMKVP 710
Query: 692 ESSFNDSLKDVQDMSLRLSVDGDKSSLNGSLDYTAASSGDPVQDQVKRVLSKIKKPDSDS 751
E +DSL+DV D+SLR S +GD +LNG LD + K+++ I + +S
Sbjct: 711 EELTSDSLRDVDDISLRFSTEGD-FTLNGELDAGT---------RQKKLVDAISQMNS-- 758
Query: 752 NDKEAEKKLLENVVSKYPMLRRRRRLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQ 811
++ + RR+ L V+A+D YD G + +I+ ++ KA L
Sbjct: 759 ---------MKGCSAAIYSPGRRQMLFVVAVDSYDDNGNIKANLNEIIKNMIKAADLTSG 809
Query: 812 TARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDP 871
++ GF L++ + E ++ I +FDA++C+SG E+YYP + D
Sbjct: 810 KGKI-GFVLASGSSLQEVVDITQKNLINLEDFDAIVCNSGSEIYYPWR------DMMVDA 862
Query: 872 DYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSK 931
DY +H++Y+W + ++ I +L+ T E+ I E S + C + +K K
Sbjct: 863 DYETHVEYKWPGESIRSVILRLICTEPAAEDD------ITEYASSCSTRCYAISVKQGVK 916
Query: 932 ARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVIL 991
RR+DDLRQ+LRMRGLRC+ +Y +TR+ ++PL ASR QALRYL +RW ++++ L
Sbjct: 917 TRRVDDLRQRLRMRGLRCNIVYTHAATRLNVIPLCASRIQALRYLSIRWGIDMSKTVFFL 976
Query: 992 GESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTTN--LRDDIVPSESPLIAHVNANAK 1049
GE GDTDYE+L+ G HKT+I+KGVV SE+LLR+ R+D VP ESP I++V N
Sbjct: 977 GEKGDTDYEDLLGGLHKTIILKGVVGSDSEKLLRSEENFKREDAVPQESPNISYVKENGG 1036
Query: 1050 VDEIANALRQVG 1061
EI + L G
Sbjct: 1037 SQEIMSTLEAYG 1048
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|O04932|SPSA1_CRAPL Probable sucrose-phosphate synthase 1 OS=Craterostigma plantagineum GN=SPS1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1194 bits (3088), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/1036 (58%), Positives = 773/1036 (74%), Gaps = 39/1036 (3%)
Query: 1 MAGNEWINGYLEAILDSGASAIEEQQKQAPVNLADRGHFNPTKYFVEEVVTSVDETDLYR 60
MAGN+WIN YLEAILD G E + + L +RG F+PT+YFVEEVV+ DETDL+R
Sbjct: 1 MAGNDWINSYLEAILDVGPGIDE---AKGSLLLRERGRFSPTRYFVEEVVSGFDETDLHR 57
Query: 61 TWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQRLANRRLEREQGRRDVTED 120
+WI+ ATR+ +ER++RLENMCWRIW+L R+KKQLE EE QR+A RRLERE+GRR+ D
Sbjct: 58 SWIRAQATRSPQERNTRLENMCWRIWNLARQKKQLENEEAQRMAKRRLERERGRREAVAD 117
Query: 121 MSEDLSEGEKGDGV------GEIQTPDTPRKKFQRNFSNLEVWSDDKKEKKLYIVLISLH 174
MSEDLSEGEKGD V GE PR + +E W + +K KKLYIVLISLH
Sbjct: 118 MSEDLSEGEKGDIVVDHSHHGESNRGRLPRIN---SVDTMEAWMNQQKGKKLYIVLISLH 174
Query: 175 GLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAE 234
GL+RGENMELGRDSDTGGQ+KYVVELARAL MPGVYRVDL +RQVSSPEVDWSYGEP E
Sbjct: 175 GLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPEVDWSYGEPTE 234
Query: 235 MLTGGPEDDGI-EVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKV 293
ML ++ + E+GESSG+YI+RIPFGP+DKY+ KELLWP+I EFVDGAL H + MSKV
Sbjct: 235 MLPPRNSENMMDEMGESSGSYIVRIPFGPKDKYVAKELLWPHIPEFVDGALGHIIQMSKV 294
Query: 294 LGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQS 353
LGEQIG G P+WP IHGHYADAGDSAALLSGALNVPM+ TGHSLGR+KLEQLL+QGR S
Sbjct: 295 LGEQIGNGHPIWPAAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLRQGRLS 354
Query: 354 KEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRG 413
+++INSTYKIMRRIE EELSLDA+E+VITST+QEI+EQW LYDGFD LE+ LRAR +R
Sbjct: 355 RDEINSTYKIMRRIEAEELSLDASEMVITSTRQEIEEQWRLYDGFDPILERKLRARIKRN 414
Query: 414 VNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMR 473
V+C+GR+MPRM+VIPPGM+F ++V + + + E D SP P IW+++MR
Sbjct: 415 VSCYGRFMPRMMVIPPGMEFHHIVPHDGDLDAEPEFNE-----DSKSPD--PHIWTEIMR 467
Query: 474 FLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNAS 533
F +NP KPMILAL+RPDPKKN+TTL+KAFGEC+PLRELANLTLIMGNRD+I+EMS NAS
Sbjct: 468 FFSNPRKPMILALARPDPKKNLTTLVKAFGECKPLRELANLTLIMGNRDNIDEMSGTNAS 527
Query: 534 VLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAA 593
VL+++LK+IDKYDLYG VAYPKHHKQ DVP+IYRLAAKTKGVFINPA +EPFGLTLIEAA
Sbjct: 528 VLLSILKMIDKYDLYGLVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAA 587
Query: 594 AHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNI 653
AHGLP+VATKNGGPVDIHR L+NG+LVDPH+Q++IADALLKLV+EK+LW +CR NG KNI
Sbjct: 588 AHGLPIVATKNGGPVDIHRVLDNGILVDPHNQESIADALLKLVAEKHLWAKCRANGLKNI 647
Query: 654 HLFSWPEHCRTYLTRVAACRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMSLRL--SV 711
HLFSWPEHC++YL+++A+C+ R P+W + D+ +E S +DSL+D+QD+SL L S
Sbjct: 648 HLFSWPEHCKSYLSKLASCKPRQPRWLRNEEDDDENSESDSPSDSLRDIQDISLNLKFSF 707
Query: 712 DGDKSSLNGSLDYTAASSGDPVQDQVKRVLSKIKKPDSDSNDKEA--EKKLLENVVSKYP 769
DGDK N S + S D +++ + + K + + EK + K+P
Sbjct: 708 DGDK---NESREKGGGSHPDDRASKIENAVLEWSKGVAKGPQRSMSIEKGEHNSNAGKFP 764
Query: 770 MLRRRRRLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSET 829
LRRR+ + VIA+DC S G + + + VF AV + V GF L+T+ +SE
Sbjct: 765 ALRRRKIMFVIAVDCKPSAG-----LSESVRKVFAAVENERAEGSV-GFILATSFNISEI 818
Query: 830 IEFLNSMKIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKT 889
FL S K+ +FDA IC+SGG++YY ++E+ D Y S I+YRWG +GL+KT
Sbjct: 819 RHFLVSEKLNPTDFDAFICNSGGDLYYSSHHSED-NPFVVDLYYHSQIEYRWGGEGLRKT 877
Query: 890 I--WKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDLRQKLRMRGL 947
+ W T + GE ++ I ED+++S +C S+ ++ P+ + + R+ +R++ L
Sbjct: 878 LVRWAASITDKKGEKEEHV---IIEDEETSADYCYSFKVQKPNVVPPVKEARKVMRIQAL 934
Query: 948 RCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAH 1007
RCH +YC+N ++ ++P+LASR+QALRYL++RW + ++ V++GESGDTDYEE++ G H
Sbjct: 935 RCHVVYCQNGNKINVIPVLASRAQALRYLYLRWGMELSKTVVVVGESGDTDYEEMLGGVH 994
Query: 1008 KTLIMKGVVEKGSEEL 1023
KT+++ GV + L
Sbjct: 995 KTVVLSGVCTTATNLL 1010
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Craterostigma plantagineum (taxid: 4153) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1067 | ||||||
| 255554030 | 1064 | sucrose phosphate syntase, putative [Ric | 0.994 | 0.997 | 0.854 | 0.0 | |
| 224055849 | 1069 | predicted protein [Populus trichocarpa] | 0.998 | 0.996 | 0.855 | 0.0 | |
| 224129136 | 1069 | predicted protein [Populus trichocarpa] | 0.998 | 0.996 | 0.845 | 0.0 | |
| 380509271 | 1064 | sucrose-phosphate synthase B [Solanum ly | 0.989 | 0.992 | 0.812 | 0.0 | |
| 225433583 | 1067 | PREDICTED: probable sucrose-phosphate sy | 0.995 | 0.995 | 0.832 | 0.0 | |
| 77176831 | 1064 | sucrose-phosphate synthase isoform B [Ni | 0.989 | 0.992 | 0.807 | 0.0 | |
| 449442337 | 1067 | PREDICTED: probable sucrose-phosphate sy | 0.987 | 0.987 | 0.826 | 0.0 | |
| 147864241 | 1057 | hypothetical protein VITISV_017581 [Viti | 0.985 | 0.995 | 0.824 | 0.0 | |
| 449518258 | 1071 | PREDICTED: probable sucrose-phosphate sy | 0.987 | 0.984 | 0.822 | 0.0 | |
| 298205168 | 1046 | unnamed protein product [Vitis vinifera] | 0.976 | 0.996 | 0.821 | 0.0 |
| >gi|255554030|ref|XP_002518055.1| sucrose phosphate syntase, putative [Ricinus communis] gi|223542651|gb|EEF44188.1| sucrose phosphate syntase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1903 bits (4930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 911/1066 (85%), Positives = 982/1066 (92%), Gaps = 5/1066 (0%)
Query: 1 MAGNEWINGYLEAILDSGASAIEEQQKQAPVNLADRGHFNPTKYFVEEVVTSVDETDLYR 60
MAGNEWINGYLEAILDSGA AIEEQ+ PV+L DRGHFNPTKYFVEEVVT VDETDL+R
Sbjct: 1 MAGNEWINGYLEAILDSGAGAIEEQKPVQPVDLKDRGHFNPTKYFVEEVVTGVDETDLHR 60
Query: 61 TWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQRLANRRLEREQGRRDVTED 120
TWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLE ELQRLANRR EREQGRRD TED
Sbjct: 61 TWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLELGELQRLANRRWEREQGRRDATED 120
Query: 121 MSEDLSEGEKGDGVGEIQTPDTPRKKFQRNFSNLEVWSDDKKEKKLYIVLISLHGLVRGE 180
MSEDLSEGEKGDGVGE+ +TPRKKFQRN+SNLEVWSDDKKEKKLYIVLISLHGLVRGE
Sbjct: 121 MSEDLSEGEKGDGVGELVQSETPRKKFQRNYSNLEVWSDDKKEKKLYIVLISLHGLVRGE 180
Query: 181 NMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGP 240
NMELGRDSDTGGQ+KYVVELARALARMPGVYRVDLF+RQ+SSPEVDWSYGEP EMLT G
Sbjct: 181 NMELGRDSDTGGQVKYVVELARALARMPGVYRVDLFTRQISSPEVDWSYGEPTEMLTAGA 240
Query: 241 ED-DGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIG 299
ED DG EVGESSGAYI+RIPFGPRDKYLRKELLWP+IQEFVDGALAH LNMSKVLGEQIG
Sbjct: 241 EDSDGNEVGESSGAYIVRIPFGPRDKYLRKELLWPHIQEFVDGALAHILNMSKVLGEQIG 300
Query: 300 GGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINS 359
GG PVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQS EDINS
Sbjct: 301 GGGPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSTEDINS 360
Query: 360 TYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGR 419
TYKIMRRIEGEELSLDAAELVITSTKQEI+EQWGLYDGFDVKLEKVLRARARRGVNCHGR
Sbjct: 361 TYKIMRRIEGEELSLDAAELVITSTKQEIEEQWGLYDGFDVKLEKVLRARARRGVNCHGR 420
Query: 420 YMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPH 479
+MPRMVVIPPGMDFSNVV QED PE+DGEL+SLIGGTDGSSPKAIPAIWSDVMRFLTNPH
Sbjct: 421 FMPRMVVIPPGMDFSNVVVQEDAPEIDGELSSLIGGTDGSSPKAIPAIWSDVMRFLTNPH 480
Query: 480 KPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVL 539
KPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDI+EM+ GNASVL TVL
Sbjct: 481 KPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIDEMTGGNASVLTTVL 540
Query: 540 KLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPM 599
KLIDKYDLYG VAYPKHHKQY+VP+IYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPM
Sbjct: 541 KLIDKYDLYGLVAYPKHHKQYEVPDIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPM 600
Query: 600 VATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWP 659
VATKNGGPVDI+RALNNGLLVDPHDQ AIADALLKLVSEKNLW ECRKNGWKNIHLFSWP
Sbjct: 601 VATKNGGPVDINRALNNGLLVDPHDQHAIADALLKLVSEKNLWHECRKNGWKNIHLFSWP 660
Query: 660 EHCRTYLTRVAACRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMSLRLSVDGDKSSLN 719
EHCRTYLTRVAACRMRHPQWQ DTP DEMA+EESS NDSLKDVQDMSLRLS+DGDKSS N
Sbjct: 661 EHCRTYLTRVAACRMRHPQWQLDTPGDEMASEESSLNDSLKDVQDMSLRLSIDGDKSSFN 720
Query: 720 GSLDYTAASSGDP-VQDQVKRVLSKIKKPDSDSNDKEAEKKLLENVVSKYPMLRRRRRLI 778
GSLDY+AA++GDP +QDQVK+VLS+IKKP+S D E K E +KYPMLRRRRRLI
Sbjct: 721 GSLDYSAAATGDPELQDQVKQVLSRIKKPESGPKDAEGGKP--ETGTNKYPMLRRRRRLI 778
Query: 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838
V+ALDCY ++G P+KKMIQI+ DV +AVR D A+++G ALSTAMP+SET++FL S KI
Sbjct: 779 VMALDCYGTEGDPEKKMIQIVQDVIRAVRSDSLFAKISGLALSTAMPLSETVDFLTSAKI 838
Query: 839 EANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTE 898
+ NEFDALICSSG E+YYPGTYTEE GKL PD DYA+HIDYRWGC+GLKKT+WKLMN TE
Sbjct: 839 QVNEFDALICSSGSELYYPGTYTEENGKLLPDTDYATHIDYRWGCEGLKKTVWKLMNMTE 898
Query: 899 GGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDLRQKLRMRGLRCHPMYCRNST 958
GE +K +S IQED KSSNAHCI+Y IKD SK ++ DLRQKLRMRGLRCHPMYCR+ST
Sbjct: 899 AGEQTKETSH-IQEDAKSSNAHCITYRIKDGSKVMKVHDLRQKLRMRGLRCHPMYCRSST 957
Query: 959 RMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEK 1018
R+Q++PLLASR+QALRY+FVRWRLNVANM+VILGE+GDTDYEE+ISGAHKT+IMK VV+K
Sbjct: 958 RVQVIPLLASRAQALRYIFVRWRLNVANMYVILGETGDTDYEEMISGAHKTIIMKDVVKK 1017
Query: 1019 GSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVGKAS 1064
GSEELLR +L+DD VP ESP +AH++ +A +EIANAL+QV K S
Sbjct: 1018 GSEELLRAMDLKDDFVPKESPSVAHLSGDASANEIANALKQVSKPS 1063
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224055849|ref|XP_002298684.1| predicted protein [Populus trichocarpa] gi|222845942|gb|EEE83489.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1878 bits (4865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 916/1071 (85%), Positives = 977/1071 (91%), Gaps = 6/1071 (0%)
Query: 1 MAGNEWINGYLEAILDSG--ASAIEEQQKQAPVNLADRGHFNPTKYFVEEVVTSVDETDL 58
M GNEWINGYLEAIL+SG A AIEE + VNL + GHFNPTKYFVEEVV VDETDL
Sbjct: 1 MPGNEWINGYLEAILNSGGGAGAIEEHKPAPTVNLRETGHFNPTKYFVEEVVRGVDETDL 60
Query: 59 YRTWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQRLANRRLEREQGRRDVT 118
+RTWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQRLANRR EREQGRRD T
Sbjct: 61 HRTWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQRLANRRWEREQGRRDAT 120
Query: 119 EDMSEDLSEGEKGDGVGEIQTPDTPRKKFQRNFSNLEVWSDDKKEKKLYIVLISLHGLVR 178
EDMSEDLSEGEKGDG+GE+ +TPRKKFQR+ SN EVWSDDKKEKKLYIVLIS+HGLVR
Sbjct: 121 EDMSEDLSEGEKGDGLGELAQSETPRKKFQRSLSNPEVWSDDKKEKKLYIVLISIHGLVR 180
Query: 179 GENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTG 238
GENMELGRDSDTGGQ+KYVVELARALARMPGVYRVDLF+RQ+SSPEVDWSYGEP EMLT
Sbjct: 181 GENMELGRDSDTGGQVKYVVELARALARMPGVYRVDLFTRQISSPEVDWSYGEPTEMLTS 240
Query: 239 GPEDD-GIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQ 297
GPEDD G EVGESSGAYI+RIPFGP DKYL KELLWPYIQEFVDGAL+H LNMSKVLGEQ
Sbjct: 241 GPEDDDGNEVGESSGAYIVRIPFGPHDKYLGKELLWPYIQEFVDGALSHILNMSKVLGEQ 300
Query: 298 IGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDI 357
IGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDI
Sbjct: 301 IGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDI 360
Query: 358 NSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCH 417
NSTYKIMRRIEGEELSLDAAELVITST+QEIDEQWGLYDGFDVKLEKVLRARARRGVNCH
Sbjct: 361 NSTYKIMRRIEGEELSLDAAELVITSTRQEIDEQWGLYDGFDVKLEKVLRARARRGVNCH 420
Query: 418 GRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTN 477
GRYMPRMVVIPPGMDFS+VV QED PEVDGEL +LI TDGSSPKAIP IWS++MRFLTN
Sbjct: 421 GRYMPRMVVIPPGMDFSSVVVQEDAPEVDGELATLISSTDGSSPKAIPPIWSEIMRFLTN 480
Query: 478 PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLIT 537
PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEM+ GN SVL T
Sbjct: 481 PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMTGGNGSVLTT 540
Query: 538 VLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGL 597
VLK+IDKYDLYG VAYPKHHKQ DVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGL
Sbjct: 541 VLKMIDKYDLYGLVAYPKHHKQADVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGL 600
Query: 598 PMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFS 657
PMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLW CRKNG KNIHLFS
Sbjct: 601 PMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWALCRKNGLKNIHLFS 660
Query: 658 WPEHCRTYLTRVAACRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMSLRLSVDGDKSS 717
WPEHCRTYLTRVAACRMRHPQWQTDTP DE+AAEESS NDSLKDVQDMSLRLS+DGDK S
Sbjct: 661 WPEHCRTYLTRVAACRMRHPQWQTDTPEDEIAAEESSLNDSLKDVQDMSLRLSIDGDKPS 720
Query: 718 LNGSLDYTAASSGDP-VQDQVKRVLSKIKKPDSDSNDKEAEKKLLENVVSKYPMLRRRRR 776
LNGSLDY+A SSGDP +QDQV+RVL+KIKKP+S+ E + E VVSKYPMLRRRRR
Sbjct: 721 LNGSLDYSAVSSGDPALQDQVQRVLNKIKKPESEPVVSEGARH--EAVVSKYPMLRRRRR 778
Query: 777 LIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSM 836
LIVIALDCYDSKG P+ KMIQI+ D+ KAVR D ARVTG ALSTAM ++ET EFL S
Sbjct: 779 LIVIALDCYDSKGFPEMKMIQIVQDIIKAVRSDSLFARVTGLALSTAMSLTETTEFLTSA 838
Query: 837 KIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNT 896
KI ANEFDALIC+SGGE+YYPGT T+ GKL DPDYA+HIDYRWGCDGLKKTIWKLMNT
Sbjct: 839 KIHANEFDALICNSGGEVYYPGTCTQVDGKLVRDPDYAAHIDYRWGCDGLKKTIWKLMNT 898
Query: 897 TEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDLRQKLRMRGLRCHPMYCRN 956
TEGG+ S SS+PI+ED+KS NAHCI+YL+KD SK +R+DDLRQKLRMRGLRCH MYCRN
Sbjct: 899 TEGGKQSDESSNPIEEDKKSRNAHCIAYLVKDRSKVKRVDDLRQKLRMRGLRCHLMYCRN 958
Query: 957 STRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVV 1016
STR+QI+P LASR+QALRYLFVRWRLNVANMFVILGE+GDTDYEE+ISGAHKT+I+K VV
Sbjct: 959 STRLQIIPHLASRAQALRYLFVRWRLNVANMFVILGENGDTDYEEMISGAHKTIILKDVV 1018
Query: 1017 EKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVGKASVGM 1067
KGSE+LLRTT+LRDDIVP ESPLIA+++ A EIA+ L+QV KAS GM
Sbjct: 1019 TKGSEDLLRTTDLRDDIVPKESPLIAYLSGKATASEIADVLKQVSKASAGM 1069
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224129136|ref|XP_002328899.1| predicted protein [Populus trichocarpa] gi|222839329|gb|EEE77666.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1869 bits (4841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 905/1071 (84%), Positives = 981/1071 (91%), Gaps = 6/1071 (0%)
Query: 1 MAGNEWINGYLEAILDSG--ASAIEEQQKQAPVNLADRGHFNPTKYFVEEVVTSVDETDL 58
MAGNEWINGYLEAILDSG A AIEE + +NL D G FNPTKYFVEEVVT VDETDL
Sbjct: 1 MAGNEWINGYLEAILDSGGGAGAIEEHKPAPSMNLRDTGDFNPTKYFVEEVVTGVDETDL 60
Query: 59 YRTWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQRLANRRLEREQGRRDVT 118
+RTWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQRLA RR ERE GRRD T
Sbjct: 61 HRTWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQRLATRRWERELGRRDAT 120
Query: 119 EDMSEDLSEGEKGDGVGEIQTPDTPRKKFQRNFSNLEVWSDDKKEKKLYIVLISLHGLVR 178
EDMSEDLSEGEKGDG+GE+ +TPRK+FQRN SNLEVWSDDKKEKKLYIVL+SLHGLVR
Sbjct: 121 EDMSEDLSEGEKGDGLGELVQSETPRKRFQRNLSNLEVWSDDKKEKKLYIVLVSLHGLVR 180
Query: 179 GENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTG 238
G+NMELGRDSDTGGQ+KYVVELARALARMPGVYRVDLF+RQ+SS EVDWSYGEP EMLT
Sbjct: 181 GDNMELGRDSDTGGQVKYVVELARALARMPGVYRVDLFTRQISSAEVDWSYGEPTEMLTA 240
Query: 239 GPEDDG-IEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQ 297
GPEDDG EVGESSGAYI+RIPFGPRDKY+RKELLWPYIQEFVDGAL+H LNMSK LGEQ
Sbjct: 241 GPEDDGGNEVGESSGAYIVRIPFGPRDKYIRKELLWPYIQEFVDGALSHILNMSKALGEQ 300
Query: 298 IGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDI 357
IGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDI
Sbjct: 301 IGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDI 360
Query: 358 NSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCH 417
NSTYKIMRRIEGEELSLDAAELVITST+QEIDEQWGLYDGFDVKLE+VLRARARRGVNCH
Sbjct: 361 NSTYKIMRRIEGEELSLDAAELVITSTRQEIDEQWGLYDGFDVKLERVLRARARRGVNCH 420
Query: 418 GRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTN 477
GRYMPRMVVIPPGMDFS+VV QE+ PEVDGEL +LI DGSSPKAIPAIWS+VMRFLTN
Sbjct: 421 GRYMPRMVVIPPGMDFSSVVVQEEAPEVDGELATLISSVDGSSPKAIPAIWSEVMRFLTN 480
Query: 478 PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLIT 537
PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDI+EM+ GNASVL T
Sbjct: 481 PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIDEMTGGNASVLTT 540
Query: 538 VLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGL 597
VLK+IDKYDLYG VAYPKHHKQ DVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGL
Sbjct: 541 VLKMIDKYDLYGLVAYPKHHKQADVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGL 600
Query: 598 PMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFS 657
PMVATKNGGPVDIHRALNNGLLVDPHDQQAI+DALLKLVSEKNLW +CR NGWKNIHLFS
Sbjct: 601 PMVATKNGGPVDIHRALNNGLLVDPHDQQAISDALLKLVSEKNLWSDCRNNGWKNIHLFS 660
Query: 658 WPEHCRTYLTRVAACRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMSLRLSVDGDKSS 717
WPEHCRTYLTRVAACRMRHPQWQTDTP DE+AAEESS NDSL DVQDMSLRLS+DGDK S
Sbjct: 661 WPEHCRTYLTRVAACRMRHPQWQTDTPEDEVAAEESSLNDSLMDVQDMSLRLSIDGDKPS 720
Query: 718 LNGSLDYTAASSGDP-VQDQVKRVLSKIKKPDSDSNDKEAEKKLLENVVSKYPMLRRRRR 776
LNGSLDY+AA++GDP V DQV+RVL+KIKKP+ E+ K E VVSK+PMLRRRRR
Sbjct: 721 LNGSLDYSAAATGDPTVSDQVQRVLNKIKKPEPRPVFSESGKP--EAVVSKHPMLRRRRR 778
Query: 777 LIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSM 836
LIVIALDCYDS G P+KKMI+I+ ++ KAVR D A+V G ALSTAM ++ET EFL S
Sbjct: 779 LIVIALDCYDSNGVPEKKMIKIVQNIIKAVRSDSLFAKVAGLALSTAMSLTETTEFLTSS 838
Query: 837 KIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNT 896
KI+ N+FDALICSSGGE+YYPGTYTEE GKL DPDYA+HIDYRWGCDGL+KTIWKLMNT
Sbjct: 839 KIQVNDFDALICSSGGEVYYPGTYTEEDGKLARDPDYAAHIDYRWGCDGLRKTIWKLMNT 898
Query: 897 TEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDLRQKLRMRGLRCHPMYCRN 956
TEGG+ S SSSPI+ED+KSSNAHCI+YL+KD SK +R+DDLRQ+LRMRGLRCH MYCRN
Sbjct: 899 TEGGKKSDESSSPIEEDKKSSNAHCIAYLVKDRSKVKRVDDLRQRLRMRGLRCHLMYCRN 958
Query: 957 STRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVV 1016
STR+QI+PLLASR+QALRYLFVRWRLNVA+MFVILGE+GDTDYEE+ISGAHKT+I+K VV
Sbjct: 959 STRLQIIPLLASRAQALRYLFVRWRLNVADMFVILGENGDTDYEEMISGAHKTVILKDVV 1018
Query: 1017 EKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVGKASVGM 1067
KGS++LLRTT+LRDDIVP +SPLIA+++ NA +IA+ L+QV K+S GM
Sbjct: 1019 TKGSDDLLRTTDLRDDIVPKDSPLIAYLSGNATASDIADVLKQVSKSSGGM 1069
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|380509271|gb|AFD64638.1| sucrose-phosphate synthase B [Solanum lycopersicum] | Back alignment and taxonomy information |
|---|
Score = 1816 bits (4705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 869/1070 (81%), Positives = 960/1070 (89%), Gaps = 14/1070 (1%)
Query: 1 MAGNEWINGYLEAILDSGASAIEEQQKQAP-----VNLADRGHFNPTKYFVEEVVTSVDE 55
MAGNEWINGYLEAIL SGASAIE+++ + +NLA+R +FNPTKYFVEEVVT VDE
Sbjct: 1 MAGNEWINGYLEAILSSGASAIEDKKPSSTTTSSHLNLAERANFNPTKYFVEEVVTGVDE 60
Query: 56 TDLYRTWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQRLANRRLEREQGRR 115
TDL+RTWIKVVATRNTRERSSRLENMCWRIWHL RKKKQLEWE+LQR ANRRLERE GR+
Sbjct: 61 TDLHRTWIKVVATRNTRERSSRLENMCWRIWHLARKKKQLEWEDLQRSANRRLERELGRK 120
Query: 116 DVTEDMSEDLSEGEKGDGVGEIQTPDTPRKKFQRNFSNLEVWSDDKKEKKLYIVLISLHG 175
DVTEDMSEDLSEGEKGD +GE T D+PRK+FQRNFSNLEVWSD KEKKLYI+L+SLHG
Sbjct: 121 DVTEDMSEDLSEGEKGDVLGETPTLDSPRKRFQRNFSNLEVWSDSNKEKKLYIILVSLHG 180
Query: 176 LVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEM 235
LVRGENMELGRDSDTGGQIKYVVELA+ALA+MPGVYRVDLF+RQ++S EVDWSYGEP EM
Sbjct: 181 LVRGENMELGRDSDTGGQIKYVVELAKALAKMPGVYRVDLFTRQIASTEVDWSYGEPTEM 240
Query: 236 LTGGPED-DGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVL 294
L GPED D ++GESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAH +NMSK L
Sbjct: 241 LNTGPEDGDDTDLGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHIINMSKAL 300
Query: 295 GEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSK 354
GEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQL+KQ RQSK
Sbjct: 301 GEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLIKQARQSK 360
Query: 355 EDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGV 414
EDINSTY+IMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGV
Sbjct: 361 EDINSTYRIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGV 420
Query: 415 NCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRF 474
NCHGR+MPRM VIPPGMDFSNVV QEDT + DG+L +L DG SPKA+P IWS++MRF
Sbjct: 421 NCHGRFMPRMAVIPPGMDFSNVVDQEDTADADGDLAALTN-VDGQSPKAVPTIWSEIMRF 479
Query: 475 LTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASV 534
LTNPHKPMILALSRPDPKKNITTL+KAFGECRPLRELANLTLIMGNRDDI+EMS+GNASV
Sbjct: 480 LTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSAGNASV 539
Query: 535 LITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAA 594
L TVLKL+D+YDLYGQVA+PKHHKQ DVPEIYRLA KTKGVFINPALVEPFGLTLIEA+A
Sbjct: 540 LTTVLKLVDRYDLYGQVAFPKHHKQSDVPEIYRLAGKTKGVFINPALVEPFGLTLIEASA 599
Query: 595 HGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIH 654
HGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLW ECRKNGWKNIH
Sbjct: 600 HGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWHECRKNGWKNIH 659
Query: 655 LFSWPEHCRTYLTRVAACRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMSLRLSVDGD 714
LFSWPEHCRTYLTR+AACRMRHPQW+TD P DE+AAEESS NDSLKDVQDMSLRLSVDG+
Sbjct: 660 LFSWPEHCRTYLTRIAACRMRHPQWKTDNPSDELAAEESSLNDSLKDVQDMSLRLSVDGE 719
Query: 715 KSSLNGSLDYTAASSGDPVQDQVKRVLSKIKKPDSDSNDKEAEKKLLENVVSKYPMLRRR 774
K+SLN S D A+++ D VQDQV RVLSK+K+P++ + E +KK +NV SKYPMLRRR
Sbjct: 720 KTSLNESFD--ASATADAVQDQVNRVLSKMKRPETSKQESEGDKK--DNVPSKYPMLRRR 775
Query: 775 RRLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLN 834
R+LIVIALDCYD+ GAP KKMIQI+ ++ K ++ D Q ARV+GFA+STAM +SE FL
Sbjct: 776 RKLIVIALDCYDTNGAPQKKMIQIIQEILKTIKSDPQVARVSGFAISTAMSMSELAAFLI 835
Query: 835 SMKIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLM 894
S I+ EFDALICSSG E++YPGT +EE GKL+PDPDY+SHI+YRWG DGL+KTIWKLM
Sbjct: 836 SGNIKVTEFDALICSSGSEVFYPGTSSEEHGKLYPDPDYSSHIEYRWGGDGLRKTIWKLM 895
Query: 895 NTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDLRQKLRMRGLRCHPMYC 954
NT EG E K+ + I+ED KSSN+HCISYLIKD SKA+++DD+RQKLRMRGLRCH MYC
Sbjct: 896 NTQEGKE-EKSVTCAIEEDVKSSNSHCISYLIKDRSKAKKVDDMRQKLRMRGLRCHLMYC 954
Query: 955 RNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKG 1014
RNSTRMQ+VPLLASRSQALRYLFVRWRLNVANM VILGE+GDTDYEELISG HKTLI+KG
Sbjct: 955 RNSTRMQVVPLLASRSQALRYLFVRWRLNVANMCVILGETGDTDYEELISGTHKTLILKG 1014
Query: 1015 VVEKGSEELLRTTN--LRDDIVPSESPLIAHVNANAKVDEIANALRQVGK 1062
VE+GSE LLRT+ LR+D+VP ESPLI + N V+E ANAL+QV +
Sbjct: 1015 AVEEGSENLLRTSGSYLREDVVPPESPLIIYTGGNETVEEFANALKQVCR 1064
|
Source: Solanum lycopersicum Species: Solanum lycopersicum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225433583|ref|XP_002271398.1| PREDICTED: probable sucrose-phosphate synthase 3-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1811 bits (4691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 891/1070 (83%), Positives = 970/1070 (90%), Gaps = 8/1070 (0%)
Query: 1 MAGNEWINGYLEAILDSGASAIEEQQKQAPVNLADRGHFNPTKYFVEEVVTSVDETDLYR 60
MAGNEWINGYLEAIL SGASAIE+ K P+ L + GHFNPTKYFVEEVVT VDETDL+R
Sbjct: 1 MAGNEWINGYLEAILVSGASAIEDS-KATPIALREGGHFNPTKYFVEEVVTGVDETDLHR 59
Query: 61 TWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQRLANRRLEREQGRRDVTED 120
TWIKVVATRNTRERSSRLENMCWRIWHL RKKKQLE E+ QRLA RR EREQGRRD TED
Sbjct: 60 TWIKVVATRNTRERSSRLENMCWRIWHLARKKKQLEVEDQQRLAVRRWEREQGRRDATED 119
Query: 121 MSEDLSEGEKGDGVGEIQTPDTPRKKFQRNFSNLEVWSDDKKEKKLYIVLISLHGLVRGE 180
MSEDLSEGEKG+ VGE+ +TP+KKFQRN SNLEVWSDD KEKKLYIVLISLHGLVRGE
Sbjct: 120 MSEDLSEGEKGETVGELLPGETPKKKFQRNSSNLEVWSDDNKEKKLYIVLISLHGLVRGE 179
Query: 181 NMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGP 240
NMELGRDSDTGGQ+KYVVEL+RALARMPGVYRVDLF+RQ+SSPEVDWSYGEP EMLT G
Sbjct: 180 NMELGRDSDTGGQVKYVVELSRALARMPGVYRVDLFTRQISSPEVDWSYGEPTEMLTVGA 239
Query: 241 ED-DGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIG 299
ED DG +VGESSGAYIIRIPFGPRDKYLRKE+LWP+IQEFVDGALAH LNMSKVLGEQIG
Sbjct: 240 EDADGTDVGESSGAYIIRIPFGPRDKYLRKEVLWPHIQEFVDGALAHILNMSKVLGEQIG 299
Query: 300 GGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINS 359
GGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDI+S
Sbjct: 300 GGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDIDS 359
Query: 360 TYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGR 419
TYKIMRRIE EELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARR VNCHGR
Sbjct: 360 TYKIMRRIEAEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRRVNCHGR 419
Query: 420 YMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPH 479
YMPRM VIPPGMDFS+V QED PEVDGELT+L +DGSSPKA+PAIWS++MRFLTNPH
Sbjct: 420 YMPRMAVIPPGMDFSSVEVQEDAPEVDGELTAL-ASSDGSSPKAVPAIWSELMRFLTNPH 478
Query: 480 KPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVL 539
KPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMS GNASVL TVL
Sbjct: 479 KPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSGGNASVLTTVL 538
Query: 540 KLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPM 599
K+IDKYDLYGQVAYPKHHKQ DVP+IYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPM
Sbjct: 539 KMIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPM 598
Query: 600 VATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWP 659
VATKNGGPVDIHRALNNGLLVDPHDQ+ IA ALLKLVSEKNLW+ECR+NGW+NIHLFSWP
Sbjct: 599 VATKNGGPVDIHRALNNGLLVDPHDQEQIASALLKLVSEKNLWIECRRNGWRNIHLFSWP 658
Query: 660 EHCRTYLTRVAACRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMSLRLSVDGDKSSLN 719
EHCRTYLTRVAACRMRHPQW+TDTP DE+AA++ S+NDSLKDVQDMSLRLSVDG+K SLN
Sbjct: 659 EHCRTYLTRVAACRMRHPQWKTDTPKDEVAADD-SWNDSLKDVQDMSLRLSVDGEKISLN 717
Query: 720 GSLDYTAASSGD-PVQDQVKRVLSKIKKPDSDSNDKEAEKKLLENVVSKYPMLRRRRRLI 778
GSL++ AA+SG+ +QDQVK VLS+IKKP+ S D E KK+++NV SKYPMLRRRRRLI
Sbjct: 718 GSLEHLAAASGEHELQDQVKHVLSRIKKPERASQDSEGGKKVVDNVPSKYPMLRRRRRLI 777
Query: 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838
VIALD YDS GAP+KKMI+I+ ++ KAVR D QTAR +GFALSTAMPVSET+EF+ S KI
Sbjct: 778 VIALDYYDSNGAPEKKMIKIVQEIMKAVRSDSQTARFSGFALSTAMPVSETVEFMKSGKI 837
Query: 839 EANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTE 898
E +EFDALICSSG EMYYPGTYTEE GKL PDPDYASHIDY WG DGLK TIWKLMNT E
Sbjct: 838 EPSEFDALICSSGSEMYYPGTYTEEDGKLLPDPDYASHIDYHWGRDGLKNTIWKLMNTDE 897
Query: 899 -GGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDLRQKLRMRGLRCHPMYCRNS 957
G SKN S PI+ED KSSNAHC+SYLIKD SK +++DDLRQKLRMRGLRCHPMYCRNS
Sbjct: 898 VKGGKSKNPSKPIEEDGKSSNAHCVSYLIKDLSKVKKVDDLRQKLRMRGLRCHPMYCRNS 957
Query: 958 TRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVE 1017
TR+Q++PLLASR+QALRYLFVRWRLNV NM+VILGE+GDTDYEEL SG HKT+IMKG+VE
Sbjct: 958 TRLQVIPLLASRAQALRYLFVRWRLNVTNMYVILGETGDTDYEELRSGTHKTVIMKGIVE 1017
Query: 1018 KGSEELLRTTNL--RDDIVPSESPLIAHVNANAKVDEIANALRQVGKASV 1065
KGS+ELLR + RDD++P +SP +A+ + A +IA AL+QV K++
Sbjct: 1018 KGSDELLRKSGSYHRDDVIPGDSPRVAYTSGEATASDIAKALQQVAKSTA 1067
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|77176831|gb|ABA64521.1| sucrose-phosphate synthase isoform B [Nicotiana tabacum] | Back alignment and taxonomy information |
|---|
Score = 1804 bits (4672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 864/1070 (80%), Positives = 954/1070 (89%), Gaps = 14/1070 (1%)
Query: 1 MAGNEWINGYLEAILDSGASAIEEQ-----QKQAPVNLADRGHFNPTKYFVEEVVTSVDE 55
MAGNEWINGYLEAIL SGASAIE++ + +NLA+R +FNPTKYFVEEVVT VDE
Sbjct: 1 MAGNEWINGYLEAILSSGASAIEDKTPSSSTTSSHLNLAERANFNPTKYFVEEVVTGVDE 60
Query: 56 TDLYRTWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQRLANRRLEREQGRR 115
TDL+RTWIKVVATRNTRERSSRLENMCWRIWHL RKKKQLEWE++QR ANRRLEREQGR+
Sbjct: 61 TDLHRTWIKVVATRNTRERSSRLENMCWRIWHLARKKKQLEWEDVQRSANRRLEREQGRK 120
Query: 116 DVTEDMSEDLSEGEKGDGVGEIQTPDTPRKKFQRNFSNLEVWSDDKKEKKLYIVLISLHG 175
DVTEDMSEDLSEGEKGD +GE T D+PRK+FQRNFSNLEVWSD KEKKLYI+L+SLHG
Sbjct: 121 DVTEDMSEDLSEGEKGDVLGETPTLDSPRKRFQRNFSNLEVWSDSNKEKKLYIILVSLHG 180
Query: 176 LVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEM 235
LVRGENMELGRDSDTGGQIKYVVELA+ALA+MPGVYRVDLF+RQ++S EVDWSYGEP EM
Sbjct: 181 LVRGENMELGRDSDTGGQIKYVVELAKALAKMPGVYRVDLFTRQIASTEVDWSYGEPTEM 240
Query: 236 LTGGPED-DGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVL 294
L GPED D ++GESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAH +NMSK L
Sbjct: 241 LNTGPEDGDDTDLGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHIINMSKAL 300
Query: 295 GEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSK 354
GEQIGGGQPVWPYVIHGHYAD GDSAALLS ALNVPMVLTGHSLGRNKLEQL+ Q QSK
Sbjct: 301 GEQIGGGQPVWPYVIHGHYADVGDSAALLSCALNVPMVLTGHSLGRNKLEQLIMQAMQSK 360
Query: 355 EDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGV 414
EDINSTY+IMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGV
Sbjct: 361 EDINSTYRIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGV 420
Query: 415 NCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRF 474
NCHGR+MPRM VIPPGMDF+NVV QEDT + DG+L +L DG SPKA+P IWS+VMRF
Sbjct: 421 NCHGRFMPRMAVIPPGMDFTNVVDQEDTADADGDLAALTN-VDGQSPKAVPTIWSEVMRF 479
Query: 475 LTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASV 534
LTNPHKPMILALSRPDPKKNITTL+KAFGECRPLRELANLTLIMGNRDDI+EMS+GNASV
Sbjct: 480 LTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSAGNASV 539
Query: 535 LITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAA 594
L TVLKL+D+YDLYGQVA+PKHHKQ DVPEIYRLA KTKGVFINPALVEPFGLTLIEA+A
Sbjct: 540 LTTVLKLVDRYDLYGQVAFPKHHKQSDVPEIYRLAGKTKGVFINPALVEPFGLTLIEASA 599
Query: 595 HGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIH 654
HGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLW EC KNGWKNIH
Sbjct: 600 HGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWHECTKNGWKNIH 659
Query: 655 LFSWPEHCRTYLTRVAACRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMSLRLSVDGD 714
LFSWPEHCRTYLTR+AACRMRHPQW+TD P DE+AAEESS NDSLKDVQDMSLRLSVDG+
Sbjct: 660 LFSWPEHCRTYLTRIAACRMRHPQWKTDNPSDELAAEESSLNDSLKDVQDMSLRLSVDGE 719
Query: 715 KSSLNGSLDYTAASSGDPVQDQVKRVLSKIKKPDSDSNDKEAEKKLLENVVSKYPMLRRR 774
K+SLN S D A+++ D VQDQV RVLSK+K+ ++ + E +KK +NV SKYPMLRRR
Sbjct: 720 KTSLNESFD--ASATADAVQDQVNRVLSKMKRSETSKQESEGDKK--DNVPSKYPMLRRR 775
Query: 775 RRLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLN 834
R+LIVIALDCYD+ GAP KKMIQI+ ++ K ++ D Q ARV+GFA+STAM +SE FL
Sbjct: 776 RKLIVIALDCYDTNGAPQKKMIQIIQEILKTIKSDPQVARVSGFAISTAMSMSELAAFLK 835
Query: 835 SMKIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLM 894
S I+ EFDALICSSG E++YPGT +EE GKL+PDPDY+SHI+YRWG DGL+KTIWKLM
Sbjct: 836 SGNIKVTEFDALICSSGSEVFYPGTSSEEHGKLYPDPDYSSHIEYRWGGDGLRKTIWKLM 895
Query: 895 NTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDLRQKLRMRGLRCHPMYC 954
NT EG E K+ + I+ED KSSN+HCISYLIKD SKA+++DD+RQKLRMRGLRCH MYC
Sbjct: 896 NTQEGKE-EKSVTCAIEEDVKSSNSHCISYLIKDRSKAKKVDDMRQKLRMRGLRCHLMYC 954
Query: 955 RNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKG 1014
RNSTRMQ+VPLLASRSQALRYLFVRWRLNVANM VILGE+GDTDYEELISG HKTLI+KG
Sbjct: 955 RNSTRMQVVPLLASRSQALRYLFVRWRLNVANMCVILGETGDTDYEELISGTHKTLILKG 1014
Query: 1015 VVEKGSEELLRTTN--LRDDIVPSESPLIAHVNANAKVDEIANALRQVGK 1062
VE+GSE LLRT+ LR+D+VP ESPLI + N V+E ANALRQV +
Sbjct: 1015 AVEEGSENLLRTSGSYLREDVVPPESPLITFTSGNETVEEFANALRQVSR 1064
|
Source: Nicotiana tabacum Species: Nicotiana tabacum Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449442337|ref|XP_004138938.1| PREDICTED: probable sucrose-phosphate synthase 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1793 bits (4643), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 881/1066 (82%), Positives = 964/1066 (90%), Gaps = 12/1066 (1%)
Query: 1 MAGNEWINGYLEAILDSGASAIEEQQ---KQAPVNLADRGHFNPTKYFVEEVVTSVDETD 57
MAGNEWINGYLEAILD+GA+AIEEQ+ A NL DRGHFNPTKYFVEEVV+ VDE+D
Sbjct: 1 MAGNEWINGYLEAILDTGATAIEEQKPASAAAAANLTDRGHFNPTKYFVEEVVSGVDESD 60
Query: 58 LYRTWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQRLANRRLEREQGRRDV 117
L+RTW+KVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQR NRRLERE+GR DV
Sbjct: 61 LHRTWLKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQRSTNRRLERERGRMDV 120
Query: 118 TEDMSEDLSEGEKGDGVGEIQTPDTPRKKFQRNFSNLEVWSDDKKEKKLYIVLISLHGLV 177
TEDMSEDLSEGEKGD V EI +TP++ FQR SNLEVWS+DKKE+KLYI+LISLHGLV
Sbjct: 121 TEDMSEDLSEGEKGDTVSEIVQNETPKESFQRTSSNLEVWSEDKKERKLYIILISLHGLV 180
Query: 178 RGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLT 237
RG+NMELGRDSDTGGQ+KYVVEL+RALA+MPGVYRVDLF+RQ+ S EVDWSYGEP EMLT
Sbjct: 181 RGDNMELGRDSDTGGQVKYVVELSRALAQMPGVYRVDLFTRQILSTEVDWSYGEPTEMLT 240
Query: 238 GGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQ 297
G +D +VGESSGAYIIRIPFGPRDKYLRKELLWP+IQEFVDGALAH LNMSK LGEQ
Sbjct: 241 TGIDDGDGDVGESSGAYIIRIPFGPRDKYLRKELLWPHIQEFVDGALAHVLNMSKALGEQ 300
Query: 298 IGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDI 357
IGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDI
Sbjct: 301 IGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDI 360
Query: 358 NSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCH 417
NS YKIMRRIE EELSLDAAELVITST+QEIDEQWGLYDGFDVKLEKVLRARARRGV H
Sbjct: 361 NSNYKIMRRIEAEELSLDAAELVITSTRQEIDEQWGLYDGFDVKLEKVLRARARRGVISH 420
Query: 418 GRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTN 477
GRYMPRMVVIPPGMDFSNVV ED P+VDGELT L +DGSSPKAIPAIWSDVMRFLTN
Sbjct: 421 GRYMPRMVVIPPGMDFSNVVVPEDAPDVDGELTQLT--SDGSSPKAIPAIWSDVMRFLTN 478
Query: 478 PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLIT 537
PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDI+EMS+GNASVL T
Sbjct: 479 PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIDEMSAGNASVLTT 538
Query: 538 VLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGL 597
V+K IDKYDLYGQVAYPKHHKQYDVP+IYRLAAKTKGVFINPALVEPFGLTLIEAAAHGL
Sbjct: 539 VIKFIDKYDLYGQVAYPKHHKQYDVPDIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGL 598
Query: 598 PMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFS 657
PMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKL+SEKNLW +CRKNG KNIHLFS
Sbjct: 599 PMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLLSEKNLWNDCRKNGLKNIHLFS 658
Query: 658 WPEHCRTYLTRVAACRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMSLRLSVDGDKSS 717
WP HCRTYLTRVAACRMRHPQWQTDTP DE++ EE SFNDSLKDVQDMSLRLSVDG+K+S
Sbjct: 659 WPAHCRTYLTRVAACRMRHPQWQTDTPGDEISTEE-SFNDSLKDVQDMSLRLSVDGEKTS 717
Query: 718 LNGSLDYTAASSGDP-VQDQVKRVLSKIKKPDSDSNDKEAEKKLLENVVSKYPMLRRRRR 776
LN S+D AAS+ DP +QDQVKRVLSKIK+ ++S + E K+LEN KYP+LRRRRR
Sbjct: 718 LNASVD-IAASTDDPDLQDQVKRVLSKIKRSGNESTETEKGNKMLENAPGKYPILRRRRR 776
Query: 777 LIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSM 836
LIVIALDCYDS GAP+KKMI+++ ++ KA RLD Q ARV+GFALSTAMP++ET EFL S
Sbjct: 777 LIVIALDCYDSNGAPEKKMIKMLQEIIKAGRLDTQVARVSGFALSTAMPLAETSEFLKSG 836
Query: 837 KIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNT 896
KI+ EFDALICSSG E+YYPG+YTEE GKL+PDPDYASHIDYRWG DGLKKTI KL++
Sbjct: 837 KIQLTEFDALICSSGSEVYYPGSYTEEDGKLYPDPDYASHIDYRWGYDGLKKTILKLLSA 896
Query: 897 TEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDLRQKLRMRGLRCHPMYCRN 956
+E E+S SP+Q+D KSSNAHCISYL+K+PSKA ++DDLRQKLRMRGLRCHPMYCR+
Sbjct: 897 SE--EDSDKFRSPVQQDGKSSNAHCISYLVKNPSKAMKVDDLRQKLRMRGLRCHPMYCRS 954
Query: 957 STRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVV 1016
STRMQIVPLLASR+QALRYLFVRWRLN++NM+V LGE GDTDYEE+ISG HKT++MKGV
Sbjct: 955 STRMQIVPLLASRAQALRYLFVRWRLNLSNMYVFLGEVGDTDYEEMISGTHKTIVMKGVW 1014
Query: 1017 EKGSEELLRTTN--LRDDIVPSESPLIAHVNANAKVDEIANALRQV 1060
KGSEELLRT+ RDDIVP ESPL+A VN +A +EIA+A++QV
Sbjct: 1015 NKGSEELLRTSGSYARDDIVPGESPLVAFVNGDANAEEIASAIKQV 1060
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147864241|emb|CAN78805.1| hypothetical protein VITISV_017581 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1784 bits (4621), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 882/1070 (82%), Positives = 960/1070 (89%), Gaps = 18/1070 (1%)
Query: 1 MAGNEWINGYLEAILDSGASAIEEQQKQAPVNLADRGHFNPTKYFVEEVVTSVDETDLYR 60
MAGNEWINGYLEAIL SGASAIE+ K P+ L + GHFNPTKYFVEEVVT VDETDL+R
Sbjct: 1 MAGNEWINGYLEAILVSGASAIEDS-KATPIALREGGHFNPTKYFVEEVVTGVDETDLHR 59
Query: 61 TWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQRLANRRLEREQGRRDVTED 120
TWIKVVATRNTRERSSRLENMCWRIWHL RKKKQLE E+ QRLA RR EREQGRRD TED
Sbjct: 60 TWIKVVATRNTRERSSRLENMCWRIWHLARKKKQLEVEDQQRLAVRRWEREQGRRDATED 119
Query: 121 MSEDLSEGEKGDGVGEIQTPDTPRKKFQRNFSNLEVWSDDKKEKKLYIVLISLHGLVRGE 180
MSEDLSEGEKG+ VGE+ +TP+KKFQRN SNLEVWSDD KEKKLYIVLISLHGLVRGE
Sbjct: 120 MSEDLSEGEKGETVGELLPGETPKKKFQRNSSNLEVWSDDNKEKKLYIVLISLHGLVRGE 179
Query: 181 NMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGP 240
NMELGRDSDTGGQ+KYVVEL+RALARMPGVYRVDLF+RQ+SSPEVDWSYGEP EMLT G
Sbjct: 180 NMELGRDSDTGGQVKYVVELSRALARMPGVYRVDLFTRQISSPEVDWSYGEPTEMLTVGA 239
Query: 241 ED-DGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIG 299
ED DG +VGESSGAYIIRIPFGPRDKYLRKE+LWP+IQEFVDGALAH LNMSK
Sbjct: 240 EDADGTDVGESSGAYIIRIPFGPRDKYLRKEVLWPHIQEFVDGALAHILNMSK------- 292
Query: 300 GGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINS 359
PVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDI+S
Sbjct: 293 ---PVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDIDS 349
Query: 360 TYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGR 419
TYKIMRRIE EELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARR VNCHGR
Sbjct: 350 TYKIMRRIEAEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRRVNCHGR 409
Query: 420 YMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPH 479
YMPRM VIPPGMDFSNV QED PEVDGELT+L +DGSSPKA+PAIWS++MRFLTNPH
Sbjct: 410 YMPRMAVIPPGMDFSNVEVQEDAPEVDGELTAL-ASSDGSSPKAVPAIWSELMRFLTNPH 468
Query: 480 KPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVL 539
KPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMS GNASVL TVL
Sbjct: 469 KPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSGGNASVLTTVL 528
Query: 540 KLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPM 599
K+IDKYDLYGQVAYPKHHKQ DVP+IYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPM
Sbjct: 529 KMIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPM 588
Query: 600 VATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWP 659
VATKNGGPVDIHRALNNGLLVDPHDQ+ IA ALLKLVSEKNLW+ECR+NGW+NIHLFSWP
Sbjct: 589 VATKNGGPVDIHRALNNGLLVDPHDQEQIASALLKLVSEKNLWIECRRNGWRNIHLFSWP 648
Query: 660 EHCRTYLTRVAACRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMSLRLSVDGDKSSLN 719
EHCRTYLTRVAACRMRHPQW+TDTP DE+AA++ S+NDSLKDVQDMSLRLSVDG+K SLN
Sbjct: 649 EHCRTYLTRVAACRMRHPQWKTDTPKDEVAADD-SWNDSLKDVQDMSLRLSVDGEKISLN 707
Query: 720 GSLDYTAASSGD-PVQDQVKRVLSKIKKPDSDSNDKEAEKKLLENVVSKYPMLRRRRRLI 778
GSL++ AA+SG+ +QDQVK VLS+IKKP+ S D E KK+++NV SKYPMLRRRRRLI
Sbjct: 708 GSLEHLAAASGEHELQDQVKHVLSRIKKPERASQDSEGGKKVVDNVPSKYPMLRRRRRLI 767
Query: 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838
VIALD YDS GAP+KKMI+I+ ++ KAVR D QTAR +GFALSTAMPVSET+EF+ S KI
Sbjct: 768 VIALDYYDSNGAPEKKMIKIVQEIMKAVRSDSQTARFSGFALSTAMPVSETVEFMKSGKI 827
Query: 839 EANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTE 898
E +EFDALICSSG EMYYPGTYTEE GKL PDPDYASHIDY WG DGLK TIWKLMNT E
Sbjct: 828 EPSEFDALICSSGSEMYYPGTYTEEDGKLLPDPDYASHIDYHWGRDGLKNTIWKLMNTDE 887
Query: 899 -GGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDLRQKLRMRGLRCHPMYCRNS 957
G SKN S PI+ED KSSNAHC+SYLIKD SK +++DDLRQKLRMRGLRCHPMYCRNS
Sbjct: 888 VKGGKSKNPSKPIEEDGKSSNAHCVSYLIKDLSKVKKVDDLRQKLRMRGLRCHPMYCRNS 947
Query: 958 TRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVE 1017
TR+Q++PLLASR+QALRYLFVRWRLNV NM+VILGE+GDTDYEEL SG HKT+IMKG+VE
Sbjct: 948 TRLQVIPLLASRAQALRYLFVRWRLNVTNMYVILGETGDTDYEELRSGTHKTVIMKGIVE 1007
Query: 1018 KGSEELLRTTNL--RDDIVPSESPLIAHVNANAKVDEIANALRQVGKASV 1065
KGS+ELLR + RDD++P +SP +A+ + A +IA AL+QV K++
Sbjct: 1008 KGSDELLRKSGSYHRDDVIPGDSPRVAYTSGEATASDIAKALQQVAKSTA 1057
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449518258|ref|XP_004166159.1| PREDICTED: probable sucrose-phosphate synthase 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1784 bits (4620), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 880/1070 (82%), Positives = 963/1070 (90%), Gaps = 16/1070 (1%)
Query: 1 MAGNEWINGYLEAILDSGASAIEEQQ---KQAPVNLADRGHFNPTKYFVEEVVTSVDETD 57
MAGNEWINGYLEAILD+GA+AIEEQ+ A NL DRGHFNPTKYFVEEVV+ VDE+D
Sbjct: 1 MAGNEWINGYLEAILDTGATAIEEQKPASAAAAANLTDRGHFNPTKYFVEEVVSGVDESD 60
Query: 58 LYRTWIKVVATRNTRERSSRLENMCWRIWHLTRKKK----QLEWEELQRLANRRLEREQG 113
L+RTW+KVVATRNTRERSSRLENMCWRIWHLTRKK QLEWEELQR NRRLERE+G
Sbjct: 61 LHRTWLKVVATRNTRERSSRLENMCWRIWHLTRKKNSFCVQLEWEELQRSTNRRLERERG 120
Query: 114 RRDVTEDMSEDLSEGEKGDGVGEIQTPDTPRKKFQRNFSNLEVWSDDKKEKKLYIVLISL 173
R DVTEDMSEDLSEGEKGD V EI +TP++ FQR SNLEVWS+DKKE+KLYI+LISL
Sbjct: 121 RMDVTEDMSEDLSEGEKGDTVSEIVQNETPKESFQRTSSNLEVWSEDKKERKLYIILISL 180
Query: 174 HGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPA 233
HGLVRG+NMELGRDSDTGGQ+KYVVEL+RALA+MPGVYRVDLF+RQ+ S EVDWSYGEP
Sbjct: 181 HGLVRGDNMELGRDSDTGGQVKYVVELSRALAQMPGVYRVDLFTRQILSTEVDWSYGEPT 240
Query: 234 EMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKV 293
EMLT G +D +VGESSGAYIIRIPFGPRDKYLRKELLWP+IQEFVDGALAH LNMSK
Sbjct: 241 EMLTTGIDDGDGDVGESSGAYIIRIPFGPRDKYLRKELLWPHIQEFVDGALAHVLNMSKA 300
Query: 294 LGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQS 353
LGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQS
Sbjct: 301 LGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQS 360
Query: 354 KEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRG 413
KEDINS YKIMRRIE EELSLDAAELVITST+QEIDEQWGLYDGFDVKLEKVLRARARRG
Sbjct: 361 KEDINSNYKIMRRIEAEELSLDAAELVITSTRQEIDEQWGLYDGFDVKLEKVLRARARRG 420
Query: 414 VNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMR 473
V HGRYMPRMVVIPPGMDFSNVV ED P+VDGELT L +DGSSPKAIPAIWSDVMR
Sbjct: 421 VISHGRYMPRMVVIPPGMDFSNVVVPEDAPDVDGELTQLT--SDGSSPKAIPAIWSDVMR 478
Query: 474 FLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNAS 533
FLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDI+EMS+GNAS
Sbjct: 479 FLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIDEMSAGNAS 538
Query: 534 VLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAA 593
VL TV+K IDKYDLYGQVAYPKHHKQYDVP+IYRLAAKTKGVFINPALVEPFGLTLIEAA
Sbjct: 539 VLTTVIKFIDKYDLYGQVAYPKHHKQYDVPDIYRLAAKTKGVFINPALVEPFGLTLIEAA 598
Query: 594 AHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNI 653
AHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKL+SEKNLW +CRKNG KNI
Sbjct: 599 AHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLLSEKNLWNDCRKNGLKNI 658
Query: 654 HLFSWPEHCRTYLTRVAACRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMSLRLSVDG 713
HLFSWP HCRTYLTRVAACRMRHPQWQTDTP DE++ EE SFNDSLKDVQDMSLRLSVDG
Sbjct: 659 HLFSWPAHCRTYLTRVAACRMRHPQWQTDTPGDEISTEE-SFNDSLKDVQDMSLRLSVDG 717
Query: 714 DKSSLNGSLDYTAASSGDP-VQDQVKRVLSKIKKPDSDSNDKEAEKKLLENVVSKYPMLR 772
+K+SLN S+D AAS+ DP +QDQVKRVLSKIK+ ++S + E K+LEN KYP+LR
Sbjct: 718 EKTSLNASVD-IAASTDDPDLQDQVKRVLSKIKRSGNESTETEKGNKMLENAPGKYPILR 776
Query: 773 RRRRLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEF 832
RRRRLIVIALDCYDS GAP+KKMI+++ ++ KA RLD Q ARV+GFALSTAMP++ET EF
Sbjct: 777 RRRRLIVIALDCYDSNGAPEKKMIKMLQEIIKAGRLDTQVARVSGFALSTAMPLAETSEF 836
Query: 833 LNSMKIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWK 892
L S KI+ EFDALICSSG E+YYPG+YTEE GKL+PDPDYASHIDYRWG DGLKKTI K
Sbjct: 837 LKSGKIQLTEFDALICSSGSEVYYPGSYTEEDGKLYPDPDYASHIDYRWGYDGLKKTILK 896
Query: 893 LMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDLRQKLRMRGLRCHPM 952
L++ +E E+S SP+Q+D KSSNAHCISYL+K+PSKA ++DDLRQKLRMRGLRCHPM
Sbjct: 897 LLSASE--EDSDKFRSPVQQDGKSSNAHCISYLVKNPSKAMKVDDLRQKLRMRGLRCHPM 954
Query: 953 YCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIM 1012
YCR+STRMQIVPLLASR+QALRYLFVRWRLN++NM+V LGE GDTDYEE+ISG HKT++M
Sbjct: 955 YCRSSTRMQIVPLLASRAQALRYLFVRWRLNLSNMYVFLGEVGDTDYEEMISGTHKTIVM 1014
Query: 1013 KGVVEKGSEELLRTTN--LRDDIVPSESPLIAHVNANAKVDEIANALRQV 1060
KGV KGSEELLRT+ RDDIVP ESPL+A VN +A +EIA+A++QV
Sbjct: 1015 KGVWNKGSEELLRTSGSYARDDIVPGESPLVAFVNGDANAEEIASAIKQV 1064
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|298205168|emb|CBI17227.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1779 bits (4608), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 878/1069 (82%), Positives = 953/1069 (89%), Gaps = 27/1069 (2%)
Query: 1 MAGNEWINGYLEAILDSGASAIEEQQKQAPVNLADRGHFNPTKYFVEEVVTSVDETDLYR 60
MAGNEWINGYLEAIL SGASAIE+ K P+ L + GHFNPTKYFVEEVVT VDETDL+R
Sbjct: 1 MAGNEWINGYLEAILVSGASAIEDS-KATPIALREGGHFNPTKYFVEEVVTGVDETDLHR 59
Query: 61 TWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQRLANRRLEREQGRRDVTED 120
TWIKVVATRNTRERSSRLENMCWRIWHL RKKKQLE E+ QRLA RR EREQGRRD TED
Sbjct: 60 TWIKVVATRNTRERSSRLENMCWRIWHLARKKKQLEVEDQQRLAVRRWEREQGRRDATED 119
Query: 121 MSEDLSEGEKGDGVGEIQTPDTPRKKFQRNFSNLEVWSDDKKEKKLYIVLISLHGLVRGE 180
MSEDLSEGEKG+ VGE+ +TP+KKFQRN SNLEVWSDD KEKKLYIVLISLHGLVRGE
Sbjct: 120 MSEDLSEGEKGETVGELLPGETPKKKFQRNSSNLEVWSDDNKEKKLYIVLISLHGLVRGE 179
Query: 181 NMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGP 240
NMELGRDSDTGGQ+KYVVEL+RALARMPGVYRVDLF+RQ+SSPEVDWSYGEP EMLT G
Sbjct: 180 NMELGRDSDTGGQVKYVVELSRALARMPGVYRVDLFTRQISSPEVDWSYGEPTEMLTVGA 239
Query: 241 ED-DGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIG 299
ED DG +VGESSGAYIIRIPFGPRDKYLRKE+LWP+IQEFVDGALAH LNMSKVLGEQIG
Sbjct: 240 EDADGTDVGESSGAYIIRIPFGPRDKYLRKEVLWPHIQEFVDGALAHILNMSKVLGEQIG 299
Query: 300 GGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINS 359
GGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDI+S
Sbjct: 300 GGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDIDS 359
Query: 360 TYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGR 419
TYKIMRRIE EELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARR VNCHGR
Sbjct: 360 TYKIMRRIEAEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRRVNCHGR 419
Query: 420 YMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPH 479
YMPRM VIPPGMDFS+V QED PEVDGELT+L +DGSSPKA+PAIWS++MRFLTNPH
Sbjct: 420 YMPRMAVIPPGMDFSSVEVQEDAPEVDGELTAL-ASSDGSSPKAVPAIWSELMRFLTNPH 478
Query: 480 KPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVL 539
KPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMS GNASVL TVL
Sbjct: 479 KPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSGGNASVLTTVL 538
Query: 540 KLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPM 599
K+IDKYDLYGQVAYPKHHKQ DVP+IYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPM
Sbjct: 539 KMIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPM 598
Query: 600 VATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWP 659
VATKNGGPVDIHRALNNGLLVDPHDQ+ IA ALLKLVSEKNLW+ECR+NGW+NIHLFSWP
Sbjct: 599 VATKNGGPVDIHRALNNGLLVDPHDQEQIASALLKLVSEKNLWIECRRNGWRNIHLFSWP 658
Query: 660 EHCRTYLTRVAACRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMSLRLSVDGDKSSLN 719
EHCRTYLTRVAACRMRHPQW+TDTP DE+AA++ S+NDSLKDVQDMSLRLSVDG+K SLN
Sbjct: 659 EHCRTYLTRVAACRMRHPQWKTDTPKDEVAADD-SWNDSLKDVQDMSLRLSVDGEKISLN 717
Query: 720 GSLDYTAASSGDPVQDQVKRVLSKIKKPDSDSNDKEAEKKLLENVVSKYPMLRRRRRLIV 779
GSL++ AA+S S D E KK+++NV SKYPMLRRRRRLIV
Sbjct: 718 GSLEHLAAASA--------------------SQDSEGGKKVVDNVPSKYPMLRRRRRLIV 757
Query: 780 IALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839
IALD YDS GAP+KKMI+I+ ++ KAVR D QTAR +GFALSTAMPVSET+EF+ S KIE
Sbjct: 758 IALDYYDSNGAPEKKMIKIVQEIMKAVRSDSQTARFSGFALSTAMPVSETVEFMKSGKIE 817
Query: 840 ANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTE- 898
+EFDALICSSG EMYYPGTYTEE GKL PDPDYASHIDY WG DGLK TIWKLMNT E
Sbjct: 818 PSEFDALICSSGSEMYYPGTYTEEDGKLLPDPDYASHIDYHWGRDGLKNTIWKLMNTDEV 877
Query: 899 GGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDLRQKLRMRGLRCHPMYCRNST 958
G SKN S PI+ED KSSNAHC+SYLIKD SK +++DDLRQKLRMRGLRCHPMYCRNST
Sbjct: 878 KGGKSKNPSKPIEEDGKSSNAHCVSYLIKDLSKVKKVDDLRQKLRMRGLRCHPMYCRNST 937
Query: 959 RMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEK 1018
R+Q++PLLASR+QALRYLFVRWRLNV NM+VILGE+GDTDYEEL SG HKT+IMKG+VEK
Sbjct: 938 RLQVIPLLASRAQALRYLFVRWRLNVTNMYVILGETGDTDYEELRSGTHKTVIMKGIVEK 997
Query: 1019 GSEELLRTTNL--RDDIVPSESPLIAHVNANAKVDEIANALRQVGKASV 1065
GS+ELLR + RDD++P +SP +A+ + A +IA AL+QV K++
Sbjct: 998 GSDELLRKSGSYHRDDVIPGDSPRVAYTSGEATASDIAKALQQVAKSTA 1046
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1067 | ||||||
| TAIR|locus:2010647 | 1062 | SPS3F "sucrose phosphate synth | 0.985 | 0.990 | 0.754 | 0.0 | |
| TAIR|locus:2124680 | 1050 | ATSPS4F [Arabidopsis thaliana | 0.631 | 0.641 | 0.670 | 1.7e-310 | |
| TAIR|locus:2149179 | 1043 | SPS1F "sucrose phosphate synth | 0.968 | 0.990 | 0.550 | 9.1e-306 | |
| TAIR|locus:2184891 | 1047 | SPS2F "sucrose phosphate synth | 0.826 | 0.842 | 0.545 | 8.2e-257 | |
| TAIR|locus:2155894 | 807 | SUS2 "sucrose synthase 2" [Ara | 0.374 | 0.495 | 0.262 | 3.7e-25 | |
| TAIR|locus:2206865 | 942 | SUS6 "sucrose synthase 6" [Ara | 0.467 | 0.529 | 0.252 | 5.7e-23 | |
| TAIR|locus:2137829 | 809 | SUS3 "AT4G02280" [Arabidopsis | 0.374 | 0.494 | 0.257 | 1.8e-21 | |
| UNIPROTKB|A7TZT2 | 454 | mfpsA "Mannosylfructose-phosph | 0.155 | 0.365 | 0.292 | 3.7e-20 | |
| TAIR|locus:2180489 | 808 | SUS1 "AT5G20830" [Arabidopsis | 0.304 | 0.402 | 0.282 | 9.5e-20 | |
| TAIR|locus:2084756 | 808 | SUS4 "AT3G43190" [Arabidopsis | 0.305 | 0.403 | 0.266 | 9.7e-20 |
| TAIR|locus:2010647 SPS3F "sucrose phosphate synthase 3F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4249 (1500.8 bits), Expect = 0., P = 0.
Identities = 810/1073 (75%), Positives = 912/1073 (84%)
Query: 1 MAGNEWINGYLEAILDSGASAIEE-QQK-QAPVNL--ADRGHFNPTKYFXXXXXXXXXXX 56
MAGNEWINGYLEAILDS A IEE QQK QA VNL D +FNPTKYF
Sbjct: 1 MAGNEWINGYLEAILDSQAQGIEETQQKPQASVNLREGDGQYFNPTKYFVEEVVTGVDET 60
Query: 57 XLYRTWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQRLANRRLEREQGRRD 116
L+RTW+KVVATRN+RER+SRLENMCWRIWHLTRKKKQLEWE+ QR+ANRRLEREQGRRD
Sbjct: 61 DLHRTWLKVVATRNSRERNSRLENMCWRIWHLTRKKKQLEWEDSQRIANRRLEREQGRRD 120
Query: 117 VTEDMSEDLSEGEKGDGVGEIQTPDTPRKKFQRNFSNLEVWSDDKKEKKLYIVLISLHGL 176
TED+SEDLSEGEKGDG+GEI P+TPR++ QRN SNLE+WSDDKKE +LY+VLISLHGL
Sbjct: 121 ATEDLSEDLSEGEKGDGLGEIVQPETPRRQLQRNLSNLEIWSDDKKENRLYVVLISLHGL 180
Query: 177 VRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEML 236
VRGENMELG DSDTGGQ+KYVVELARALARMPGVYRVDLF+RQ+ S EVDWSY EP EML
Sbjct: 181 VRGENMELGSDSDTGGQVKYVVELARALARMPGVYRVDLFTRQICSSEVDWSYAEPTEML 240
Query: 237 TGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGE 296
T + DG E GESSGAYIIRIPFGPRDKYL KE+LWP++QEFVDGALAH LNMSKVLGE
Sbjct: 241 TTAEDCDGDETGESSGAYIIRIPFGPRDKYLNKEILWPFVQEFVDGALAHILNMSKVLGE 300
Query: 297 QIGGGQPVWPYVIHGHYXXXXXXXXXXXXXXNVPMVLTGHSLGRNKLEQLLKQGRQSKED 356
QIG G+PVWPYVIHGHY NVPMVLTGHSLGRNKLEQLLKQGRQSKED
Sbjct: 301 QIGKGKPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKED 360
Query: 357 INSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNC 416
INSTYKI RRIE EELSLDAAELVITST+QEIDEQWGLYDGFDVKLEKVLRARARRGVNC
Sbjct: 361 INSTYKIKRRIEAEELSLDAAELVITSTRQEIDEQWGLYDGFDVKLEKVLRARARRGVNC 420
Query: 417 HGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLT 476
HGR+MPRM VIPPGMDF+NV QEDTPE DG+L SL+GGT+GSSPKA+P IWS+VMRF T
Sbjct: 421 HGRFMPRMAVIPPGMDFTNVEVQEDTPEGDGDLASLVGGTEGSSPKAVPTIWSEVMRFFT 480
Query: 477 NPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLI 536
NPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDI+E+SSGNASVL
Sbjct: 481 NPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIDELSSGNASVLT 540
Query: 537 TVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHG 596
TVLKLIDKYDLYG VAYPKHHKQ DVP+IYRLAA TKGVFINPALVEPFGLTLIEAAAHG
Sbjct: 541 TVLKLIDKYDLYGSVAYPKHHKQSDVPDIYRLAANTKGVFINPALVEPFGLTLIEAAAHG 600
Query: 597 LPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLF 656
LPMVATKNGGPVDIHRAL+NGLLVDPHDQ+AIA+ALLKLVSEKNLW ECR NGWKNIHLF
Sbjct: 601 LPMVATKNGGPVDIHRALHNGLLVDPHDQEAIANALLKLVSEKNLWHECRINGWKNIHLF 660
Query: 657 SWPEHCRTYLTRVAACRMRHPQWQTDTPVDEMAAEESSF--NDSLKDVQDMSLRLSVDGD 714
SWPEHCRTYLTR+AACRMRHPQWQTD DE+AA++ F NDSLKDVQDMSLRLS+DGD
Sbjct: 661 SWPEHCRTYLTRIAACRMRHPQWQTDA--DEVAAQDDEFSLNDSLKDVQDMSLRLSMDGD 718
Query: 715 KSSLNGSLDYTAASSGDPVQDQVKRVLSKIKKPDSDSNDKEAEKKLLENVVSKYPMXXXX 774
K SLNGSL+ +S DPV K+++S+++ P+ S + KK +N+ SKYP+
Sbjct: 719 KPSLNGSLE---PNSADPV----KQIMSRMRTPEIKSKPELQGKKQSDNLGSKYPVLRRR 771
Query: 775 XXXIVIALDCYDSKGAPDKK-MIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFL 833
+V+A+DCYD++GAPD+K M+ ++ ++ KAVR D Q A+ +GFA+ST+MP+ E FL
Sbjct: 772 ERLVVLAVDCYDNEGAPDEKAMVPMIQNIIKAVRSDPQMAKNSGFAISTSMPLDELTRFL 831
Query: 834 NSMKIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKL 893
S KI+ +EFD LICSSG E+YYPG E GKL PDPDY+SHIDYRWG +GLK T+WKL
Sbjct: 832 KSAKIQVSEFDTLICSSGSEVYYPGG---EEGKLLPDPDYSSHIDYRWGMEGLKNTVWKL 888
Query: 894 MNTTEGGENSKNSSSP--IQEDQKSSNAHCISYLIKDPSKARRIDDLRQKLRMRGLRCHP 951
MNTT G ++N SP IQEDQ SSN+HC++Y+IKD SK R+DDLRQKLR+RGLRCHP
Sbjct: 889 MNTTAVGGEARNKGSPSLIQEDQASSNSHCVAYMIKDRSKVMRVDDLRQKLRLRGLRCHP 948
Query: 952 MYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLI 1011
MYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANM+V++G+ GDTDYEELISG HKT+I
Sbjct: 949 MYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMYVVVGDRGDTDYEELISGTHKTVI 1008
Query: 1012 MKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVGKAS 1064
+KG+V GS+ LLR+T+LRDDIVPSESP I + ++ V EI + +Q+ KA+
Sbjct: 1009 VKGLVTLGSDALLRSTDLRDDIVPSESPFIGFLKVDSPVKEITDIFKQLSKAT 1061
|
|
| TAIR|locus:2124680 ATSPS4F [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2409 (853.1 bits), Expect = 1.7e-310, Sum P(3) = 1.7e-310
Identities = 464/692 (67%), Positives = 544/692 (78%)
Query: 39 FNPTKYFXXXXXXXXXXXXLYRTWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWE 98
F+P KYF LY+TWIKV+ATRNTRERS+RLEN+CWRIWHL RKKKQ+ W+
Sbjct: 61 FSPIKYFVEEVVNSFDESDLYKTWIKVIATRNTRERSNRLENICWRIWHLARKKKQIVWD 120
Query: 99 ELQRLANRRLEREQGRRDVTEDMSEDLSEGEKGDGVGE------IQTPDTPRKKFQRNFS 152
+ RL+ RR+EREQGR D ED+ +LSEGEK GE + T + PR R S
Sbjct: 121 DGVRLSKRRIEREQGRNDAEEDLLSELSEGEKDKNDGEKEKSEVVTTLEPPRDHMPRIRS 180
Query: 153 NLEVWS-DDKKEKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVY 211
+++WS DDK + LYIVLIS+HGLVRGENMELGRDSDTGGQ+KYVVELARALA GV+
Sbjct: 181 EMQIWSEDDKSSRNLYIVLISMHGLVRGENMELGRDSDTGGQVKYVVELARALANTEGVH 240
Query: 212 RVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKEL 271
RVDL +RQ+SSPEVD+SYGEP EML+ PE +S G+YIIRIP G RDKY+ KE
Sbjct: 241 RVDLLTRQISSPEVDYSYGEPVEMLSCPPEGS-----DSCGSYIIRIPCGSRDKYIPKES 295
Query: 272 LWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYXXXXXXXXXXXXXXNVPM 331
LWP+I EFVDGAL H +++++ LGEQ+ GG+P+WPYVIHGHY NVPM
Sbjct: 296 LWPHIPEFVDGALNHIVSIARSLGEQVNGGKPIWPYVIHGHYADAGEVAAHLAGALNVPM 355
Query: 332 VLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQ 391
VLTGHSLGRNK EQLL+QGR ++EDI+ TYKIMRRIE EE SLDAAE+V+TST+QEID Q
Sbjct: 356 VLTGHSLGRNKFEQLLQQGRITREDIDRTYKIMRRIEAEEQSLDAAEMVVTSTRQEIDAQ 415
Query: 392 WGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTS 451
WGLYDGFD+KLE+ LR R RRGV+C GRYMPRMVVIPPGMDFS V+ Q D+ E DG+L S
Sbjct: 416 WGLYDGFDIKLERKLRVRRRRGVSCLGRYMPRMVVIPPGMDFSYVLTQ-DSQEPDGDLKS 474
Query: 452 LIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLREL 511
LIG K +P IWS++MRF +NPHKP ILALSRPD KKN+TTL+KAFGEC+PLREL
Sbjct: 475 LIGPDRNQIKKPVPPIWSEIMRFFSNPHKPTILALSRPDHKKNVTTLVKAFGECQPLREL 534
Query: 512 ANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAK 571
ANL LI+GNRDDIEEM + ++ VL+ VLKLID+YDLYGQVAYPKHHKQ +VP+IYRLAAK
Sbjct: 535 ANLVLILGNRDDIEEMPNSSSVVLMNVLKLIDQYDLYGQVAYPKHHKQSEVPDIYRLAAK 594
Query: 572 TKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADA 631
TKGVFINPALVEPFGLTLIEAAA+GLP+VAT+NGGPVDI +ALNNGLLVDPHDQQAI+DA
Sbjct: 595 TKGVFINPALVEPFGLTLIEAAAYGLPIVATRNGGPVDIVKALNNGLLVDPHDQQAISDA 654
Query: 632 LLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRMRHPQWQTDTPVDEMAAE 691
LLKLV+ K+LW ECRKNG KNIH FSWPEHCR YL+ V CR RHP + +D M
Sbjct: 655 LLKLVANKHLWAECRKNGLKNIHRFSWPEHCRNYLSHVEHCRNRHPT----SSLDIMKVP 710
Query: 692 ESSFNDSLKDVQDMSLRLSVDGDKSSLNGSLD 723
E +DSL+DV D+SLR S +GD +LNG LD
Sbjct: 711 EELTSDSLRDVDDISLRFSTEGD-FTLNGELD 741
|
|
| TAIR|locus:2149179 SPS1F "sucrose phosphate synthase 1F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2934 (1037.9 bits), Expect = 9.1e-306, P = 9.1e-306
Identities = 585/1062 (55%), Positives = 758/1062 (71%)
Query: 1 MAGNEWINGYLEAILDSGASAIEEQQKQAPVNLADRGHFNPTKYFXXXXXXXXXXXXLYR 60
MAGN+W+N YLEAILD G +++ + + L +RG F P++YF L+R
Sbjct: 1 MAGNDWVNSYLEAILDVG-QGLDDARSSPSLLLRERGRFTPSRYFVEEVITGYDETDLHR 59
Query: 61 TWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQRLANRRLEREQGRRDVTED 120
+W+K VATR+ +ER++RLENMCWRIW+L R+KKQ E +E QRLA RRLERE+GRR+ T D
Sbjct: 60 SWVKAVATRSPQERNTRLENMCWRIWNLARQKKQHEEKEAQRLAKRRLEREKGRREATAD 119
Query: 121 MSEDLSEGEKGDGVGEIQTP-DTPRKKFQR--NFSNLEVWSDDKKEKKLYIVLISLHGLV 177
MSE+ SEGEKGD + +I T ++ + + R + ++E+W+ +K KLY+VLISLHGL+
Sbjct: 120 MSEEFSEGEKGDIISDISTHGESTKPRLPRINSAESMELWASQQKGNKLYLVLISLHGLI 179
Query: 178 RGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLT 237
RGENMELGRDSDTGGQ+KYVVELARAL MPGVYRVDL +RQVSSP+VD+SYGEP EMLT
Sbjct: 180 RGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDYSYGEPTEMLT 239
Query: 238 G-GPEDDGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGE 296
ED E+GESSGAYI+RIPFGP+DKY+ KELLWP+I EFVDGA++H + MS VLGE
Sbjct: 240 PRDSEDFSDEMGESSGAYIVRIPFGPKDKYIPKELLWPHIPEFVDGAMSHIMQMSNVLGE 299
Query: 297 QIGGGQPVWPYVIHGHYXXXXXXXXXXXXXXNVPMVLTGHSLGRNKLEQLLKQGRQSKED 356
Q+G G+P+WP IHGHY NVPM+LTGHSLGR+KLEQLL+QGR SKE+
Sbjct: 300 QVGVGKPIWPSAIHGHYADAGDATALLSGALNVPMLLTGHSLGRDKLEQLLRQGRLSKEE 359
Query: 357 INSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNC 416
INSTYKIMRRIEGEELSLD +E+VITST+QEIDEQW LYDGFD LE+ LRAR +R V+C
Sbjct: 360 INSTYKIMRRIEGEELSLDVSEMVITSTRQEIDEQWRLYDGFDPILERKLRARIKRNVSC 419
Query: 417 HGRYMPRMVVIPPGMDFSNVVAQE-DTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFL 475
+GR+MPRMV IPPGM+F+++V D + DG +SP P IW+++MRF
Sbjct: 420 YGRFMPRMVKIPPGMEFNHIVPHGGDMEDTDGN------EEHPTSPD--PPIWAEIMRFF 471
Query: 476 TNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVL 535
+N KPMILAL+RPDPKKNITTL+KAFGECRPLRELANL LIMGNRD I+EMSS ++SVL
Sbjct: 472 SNSRKPMILALARPDPKKNITTLVKAFGECRPLRELANLALIMGNRDGIDEMSSTSSSVL 531
Query: 536 ITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAH 595
++VLKLIDKYDLYGQVAYPKHHKQ DVP+IYRLAAK+KGVFINPA++EPFGLTLIEAAAH
Sbjct: 532 LSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKSKGVFINPAIIEPFGLTLIEAAAH 591
Query: 596 GLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHL 655
GLPMVATKNGGPVDIHR L+NGLLVDPHDQQ+I++ALLKLV++K+LW +CR+NG KNIH
Sbjct: 592 GLPMVATKNGGPVDIHRVLDNGLLVDPHDQQSISEALLKLVADKHLWAKCRQNGLKNIHQ 651
Query: 656 FSWPEHCRTYLTRVAACRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMSLRLSVDGDK 715
FSWPEHC+TYL+R+ + + RHPQWQ+D D +E S +DSL+D+QD+SL L D
Sbjct: 652 FSWPEHCKTYLSRITSFKPRHPQWQSDDGGDN--SEPESPSDSLRDIQDISLNLKFSFDG 709
Query: 716 SSLNGSLDYTAASSGDPVQDQVKRVLSKIKKPDSDSNDKEAEKKLLENVVSKYPMXXXXX 775
S N + SS D + +++ + K DS K + E K+P
Sbjct: 710 SG-NDNYMNQEGSSMDR-KSKIEAAVQNWSK-GKDSR-KMGSLERSEVNSGKFPAVRRRK 765
Query: 776 XXIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNS 835
+VIALD +D G D ++ + AV + V GF LST++ +SE FL S
Sbjct: 766 FIVVIALD-FD--GEEDT--LEATKRILDAVEKERAEGSV-GFILSTSLTISEVQSFLVS 819
Query: 836 MKIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMN 895
+ N+FDA IC+SG +++Y E+G D Y SHI+YRWG +GL+KT+ + +
Sbjct: 820 GGLNPNDFDAFICNSGSDLHYTSLNNEDG-PFVVDFYYHSHIEYRWGGEGLRKTLIRWAS 878
Query: 896 TTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDLRQKLRMRGLRCHPMYCR 955
+ + + N + + S +C ++ +K P+ + +LR+ LR++ LRCH +Y +
Sbjct: 879 SLNE-KKADNDEQIVTLAEHLSTDYCYTFTVKKPAAVPPVRELRKLLRIQALRCHVVYSQ 937
Query: 956 NSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGV 1015
N TR+ ++P+LASR QALRYLFVRW +++A M V +GESGDTDYE L+ G HK++++KGV
Sbjct: 938 NGTRINVIPVLASRIQALRYLFVRWGIDMAKMAVFVGESGDTDYEGLLGGLHKSVVLKGV 997
Query: 1016 VEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANAL 1057
R+ L D ++ ES + H + ++ V + L
Sbjct: 998 SCSACLHANRSYPLTD-VISFESNNVVHASPDSDVRDALKKL 1038
|
|
| TAIR|locus:2184891 SPS2F "sucrose phosphate synthase 2F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2472 (875.2 bits), Expect = 8.2e-257, P = 8.2e-257
Identities = 511/936 (54%), Positives = 646/936 (69%)
Query: 1 MAGNEWINGYLEAILDSGASAIEEQ-----QKQAPVNLADRGHFNPTKYFXXXXXXXXXX 55
M GN+W+N YLEAIL + + ++ + L +RGHF+PT+YF
Sbjct: 1 MVGNDWVNSYLEAILAAEPGIANSKPPGTGDSKSSLLLRERGHFSPTRYFVEEVITGFDE 60
Query: 56 XXLYRTWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQRLANRRLEREQGRR 115
L+R+W++ ATR+ +ER++RLEN+CWRIW+L R+KKQ+E + +R A R ERE+ RR
Sbjct: 61 TDLHRSWVQAAATRSPQERNTRLENLCWRIWNLARQKKQVEGKNAKREAKREREREKARR 120
Query: 116 DVTEDMSEDLSEGEKGDGVGEIQTP-DTPRKKFQRNFSNLEV---WSDDKKEKKLYIVLI 171
+VT +MSED SEGEK D GEI TP D K S+++V W KEKKLYIVLI
Sbjct: 121 EVTAEMSEDFSEGEKADLPGEIPTPSDNNTKGRMSRISSVDVFENWFAQHKEKKLYIVLI 180
Query: 172 SLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGE 231
SLHGL+RGENMELGRDSDTGGQ+KYVVELARAL MPGVYRVDL +RQV++P+VD SY E
Sbjct: 181 SLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVTAPDVDSSYSE 240
Query: 232 PAEMLTGGPEDDGIEV--GESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLN 289
P+EML P D IE GESSGAYIIRIPFGP+DKY+ KELLWP+I EFVD AL+H +
Sbjct: 241 PSEMLN--PIDTDIEQENGESSGAYIIRIPFGPKDKYVPKELLWPHIPEFVDRALSHIMQ 298
Query: 290 MSKVLGEQIGGGQPVWPYVIHGHYXXXXXXXXXXXXXXNVPMVLTGHSLGRNKLEQLLKQ 349
+SKVLGEQIGGGQ VWP IHGHY NVPMV TGHSLGR+KLEQLLKQ
Sbjct: 299 ISKVLGEQIGGGQQVWPVSIHGHYADAGDSTALLSGALNVPMVFTGHSLGRDKLEQLLKQ 358
Query: 350 GRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRAR 409
GR KE+INS YKI RRIE EEL LDA+E+VITST+QE+DEQW LYDGFD LE+ LRAR
Sbjct: 359 GRP-KEEINSNYKIWRRIEAEELCLDASEIVITSTRQEVDEQWRLYDGFDPVLERKLRAR 417
Query: 410 ARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWS 469
+RGV+C GR+MPRMVVIPPGM+F ++V + VD + G D + A P IWS
Sbjct: 418 MKRGVSCLGRFMPRMVVIPPGMEFHHIVPHD----VDAD------GDDENPQTADPPIWS 467
Query: 470 DVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSS 529
++MRF +NP KPMILAL+RPDPKKN+ TL+KAFGECRPLRELANLTLIMGNR+DI+E+SS
Sbjct: 468 EIMRFFSNPRKPMILALARPDPKKNLVTLVKAFGECRPLRELANLTLIMGNRNDIDELSS 527
Query: 530 GNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTL 589
N+SVL+++LKLIDKYDLYGQVA PKHH+Q DVPEIYRLAAKTKGVFINPA +EPFGLTL
Sbjct: 528 TNSSVLLSILKLIDKYDLYGQVAMPKHHQQSDVPEIYRLAAKTKGVFINPAFIEPFGLTL 587
Query: 590 IEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNG 649
IEA AHGLP VAT NGGPVDIHR L+NGLLVDPHDQQAIADALLKLVS++ LW CR+NG
Sbjct: 588 IEAGAHGLPTVATINGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVSDRQLWGRCRQNG 647
Query: 650 WKNIHLFSWPEHCRTYLTRVAACRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMSL-- 707
NIHLFSWPEHC+TYL R+A+C+ RHP+WQ V+ ++ S +DSL+D+ D+SL
Sbjct: 648 LNNIHLFSWPEHCKTYLARIASCKQRHPKWQR---VEFENSDSDSPSDSLRDINDISLNL 704
Query: 708 RLSVDGDKSSLNGSLDYTAASSGDPVQDQVKRVLSKIKKPDSDSNDKEAEKKLLENVVSK 767
+LS+DG+KS N +D ++ D +D+ ++++K S K K E SK
Sbjct: 705 KLSLDGEKSGSNNGVD----TNLD-AEDRAAERKAEVEKAVSTLAQKS---KPTEKFDSK 756
Query: 768 YPMXXXXXXXIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVS 827
P VI++DC + ++ ++ V A T + +++ + +
Sbjct: 757 MPTLKRRKNIFVISVDC-----SATSDLLAVVKTVIDAAGRGSSTGFILSTSMTISETHT 811
Query: 828 ETIEF-LNSMKIEA----NEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWG 882
+ L +A + + SSG E YT D DY SHI++RWG
Sbjct: 812 ALLSGGLKPQDFDAVICSSGSELYFTSSGSEDKTALPYTL-------DADYHSHIEFRWG 864
Query: 883 CDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSN 918
+ L+KT+ + +++ E + +K ++++ S+N
Sbjct: 865 GESLRKTLIRWISSVEEKKKTKKGEILVEDESSSTN 900
|
|
| TAIR|locus:2155894 SUS2 "sucrose synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 322 (118.4 bits), Expect = 3.7e-25, P = 3.7e-25
Identities = 113/431 (26%), Positives = 191/431 (44%)
Query: 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWP 306
V + A+I+RIPF LRK W I F + ++ +I P
Sbjct: 353 VSGTEHAHILRIPFRTEKGILRK---W--ISRF--DVWPYLETFAEDASNEISAELQGVP 405
Query: 307 YVIHGHYXXXXXXXXXXXXXXNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRR 366
+I G+Y V H+L + K + R + ED Y +
Sbjct: 406 NLIIGNYSDGNLVASLLASKLGVIQCNIAHALEKTKYPESDIYWR-NHED---KYHFSSQ 461
Query: 367 IEGEELSLDAAELVITSTKQEI---DEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPR 423
+ ++++ A+ +ITST QEI G Y+ L R G++ + P+
Sbjct: 462 FTADLIAMNNADFIITSTYQEIAGSKNNVGQYESHTAFTMPGLY-RVVHGIDV---FDPK 517
Query: 424 MVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDV-MRFLTNPHKPM 482
++ PG D + D + LT+L + A +D + L++ KP+
Sbjct: 518 FNIVSPGADMTIYFPYSDK---ERRLTAL---HESIEELLFSAEQNDEHVGLLSDQSKPI 571
Query: 483 ILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLI 542
I +++R D KN+T L++ + + LRELANL ++ G D+ + + + + LI
Sbjct: 572 IFSMARLDRVKNLTGLVECYAKNSKLRELANLVIVGGYIDENQSRDREEMAEIQKMHSLI 631
Query: 543 DKYDLYGQVAY-PKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVA 601
++YDL+G+ + + E+YR A TKGVF+ PA E FGLT++E+ LP A
Sbjct: 632 EQYDLHGEFRWIAAQMNRARNGELYRYIADTKGVFVQPAFYEAFGLTVVESMTCALPTFA 691
Query: 602 TKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLV----SEKNLWVECRKNGWKNIH-LF 656
T +GGP +I +G +DP+ +A L+ + N WV+ + G K I+ +
Sbjct: 692 TCHGGPAEIIENGVSGFHIDPYHPDQVAATLVSFFETCNTNPNHWVKISEGGLKRIYERY 751
Query: 657 SWPEHCRTYLT 667
+W ++ LT
Sbjct: 752 TWKKYSERLLT 762
|
|
| TAIR|locus:2206865 SUS6 "sucrose synthase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 303 (111.7 bits), Expect = 5.7e-23, P = 5.7e-23
Identities = 138/547 (25%), Positives = 244/547 (44%)
Query: 242 DDGIEVGESSG-AYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGG 300
D +E E + ++I+R+PF LR+ + I +++ SK+L +++
Sbjct: 354 DQELEAIEGTKHSHILRVPFVTNKGVLRQWVSRFDIYPYLERFTQDAT--SKIL-QRLD- 409
Query: 301 GQPVWPYVIHGHYXXXXXXXXXXXXXXNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINST 360
P +I G+Y V H+L + K E + KE ++
Sbjct: 410 ---CKPDLIIGNYTDGNLVASLMATKLGVTQGTIAHALEKTKYED---SDAKWKE-LDPK 462
Query: 361 YKIMRRIEGEELSLDAAELVITSTKQEI---DEQWGLYDGFDVKLEKVLRARARRGVNCH 417
Y + + ++++ + +ITST QEI ++ G Y+ L R G++
Sbjct: 463 YHFSCQFTADLIAMNVTDFIITSTYQEIAGSKDRPGQYESHTAFTMPGL-CRVVSGIDV- 520
Query: 418 GRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTN 477
+ P+ + PG D S V T E D T ++ M +L +
Sbjct: 521 --FDPKFNIAAPGADQS--VYFPYT-EKDKRFTKFHPSIQELLYNEKDN--AEHMGYLAD 573
Query: 478 PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLIT 537
KP+I +++R D KNIT L++ +G+ + LRE+ANL ++ G D + + +
Sbjct: 574 REKPIIFSMARLDTVKNITGLVEWYGKDKRLREMANLVVVAGFFDMSKSNDREEKAEIKK 633
Query: 538 VLKLIDKYDLYGQVAY-PKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHG 596
+ LI+KY L G+ + +Y E+YR A TKGVF+ PAL E FGLT+IEA G
Sbjct: 634 MHDLIEKYKLKGKFRWIAAQTDRYRNSELYRCIADTKGVFVQPALYEAFGLTVIEAMNCG 693
Query: 597 LPMVATKNGGPVDIHRALNNGLLVDPH--DQQA--IADALLKLVSEKNLWVECRKNGWKN 652
LP AT GGP +I +G +DP+ D+ I D K S+ W K G K
Sbjct: 694 LPTFATNQGGPAEIIVDGVSGFHIDPNNGDESVTKIGDFFSKCRSDGLYWDNISKGGLKR 753
Query: 653 IH-LFSWPEHCRTYLTRVAACRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQ--DMSLRL 709
I+ ++W + Y ++ + W+ D+ A++ + + L ++Q ++ ++
Sbjct: 754 IYECYTW----KIYAEKLLKMGSLYGFWR-QVNEDQKKAKKR-YIEMLYNLQFKQLTKKV 807
Query: 710 SVDGDK------SSLNGSLDY--TAASSGDPVQDQVKRVLSKIKKPDS-DSND-KEAEKK 759
++ DK +SL L T +G ++ + +K K D + +D K E++
Sbjct: 808 TIPEDKPLPLRLASLRNLLPKKTTNLGAGSKQKEVTETEKTKQKSKDGQEQHDVKVGERE 867
Query: 760 LLENVVS 766
+ E +++
Sbjct: 868 VREGLLA 874
|
|
| TAIR|locus:2137829 SUS3 "AT4G02280" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 288 (106.4 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 111/431 (25%), Positives = 184/431 (42%)
Query: 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWP 306
V + +I+R+PF LRK W I F + N ++ +I G P
Sbjct: 356 VSGTEHTHILRVPFRSEKGILRK---W--ISRF--DVWPYLENYAQDAASEIVGELQGVP 408
Query: 307 YVIHGHYXXXXXXXXXXXXXXNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRR 366
I G+Y V H+L + K +D ++ Y +
Sbjct: 409 DFIIGNYSDGNLVASLMAHRMGVTQCTIAHALEKTKYPD----SDIYWKDFDNKYHFSCQ 464
Query: 367 IEGEELSLDAAELVITSTKQEI---DEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPR 423
+ ++++ A+ +ITST QEI G Y+ L R G++ + P+
Sbjct: 465 FTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHGAFTLPGLY-RVVHGIDV---FDPK 520
Query: 424 MVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMI 483
++ PG D + + LT+L G + P + + L++ KP++
Sbjct: 521 FNIVSPGADMTIYFPYSEETR---RLTALHGSIEEMLYS--PDQTDEHVGTLSDRSKPIL 575
Query: 484 LALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVL-KLI 542
+++R D KNI+ L++ + + LREL NL +I GN D + + V I + L+
Sbjct: 576 FSMARLDKVKNISGLVEMYSKNTKLRELVNLVVIAGNID-VNKSKDREEIVEIEKMHNLM 634
Query: 543 DKYDLYGQVAY-PKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVA 601
Y L GQ + + E+YR A T+G F PA E FGLT++EA GLP A
Sbjct: 635 KNYKLDGQFRWITAQTNRARNGELYRYIADTRGAFAQPAFYEAFGLTVVEAMTCGLPTFA 694
Query: 602 TKNGGPVDIHRALNNGLLVDP-HDQQA---IADALLKLVSEKNLWVECRKNGWKNIH-LF 656
T +GGP +I +G +DP H +QA +AD + + N W + G + I+ +
Sbjct: 695 TCHGGPAEIIEHGLSGFHIDPYHPEQAGNIMADFFERCKEDPNHWKKVSDAGLQRIYERY 754
Query: 657 SWPEHCRTYLT 667
+W + +T
Sbjct: 755 TWKIYSERLMT 765
|
|
| UNIPROTKB|A7TZT2 mfpsA "Mannosylfructose-phosphate synthase" [Agrobacterium fabrum str. C58 (taxid:176299)] | Back alignment and assigned GO terms |
|---|
Score = 168 (64.2 bits), Expect = 3.7e-20, Sum P(3) = 3.7e-20
Identities = 53/181 (29%), Positives = 84/181 (46%)
Query: 482 MILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKL 541
++LAL R K L+ F A L L +G E M ++L + +
Sbjct: 252 VVLALGRLATNKGYDLLIDGFSVLAEREPEARLHLAVGG----ENMDEQETTILNQLKER 307
Query: 542 IDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVA 601
+ L +VA+ + D+P+IYR A +F+ + EPFG+T IEA A G P V
Sbjct: 308 VKSLGLEDKVAFSGYVADEDLPDIYRAA----DLFVLSSRYEPFGMTAIEAMASGTPTVV 363
Query: 602 TKNGGPVDIHRALNNG---LLVDPHDQQAIADALLKLVSEKNLWVECRKNG-WKNIHLFS 657
T +GG + RA++ G L DP D++ + ++K + L+ + G K LF+
Sbjct: 364 TIHGG---LFRAISYGRHALFADPFDKEDLGITMMKPFKHERLYGRLSRMGAHKARSLFT 420
Query: 658 W 658
W
Sbjct: 421 W 421
|
|
| TAIR|locus:2180489 SUS1 "AT5G20830" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 280 (103.6 bits), Expect = 9.5e-20, Sum P(2) = 9.5e-20
Identities = 102/361 (28%), Positives = 166/361 (45%)
Query: 328 NVPMVLTGHSLGRNK--LEQLLKQGRQSKEDI-----NSTYKIMRRIEGEELSLDAAELV 380
N+ L H LG + + L++ + DI + Y + + +++ + +
Sbjct: 419 NLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFI 478
Query: 381 ITSTKQEI---DEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVV 437
ITST QEI E G Y+ L R G++ + P+ ++ PG D S +
Sbjct: 479 ITSTFQEIAGSKETVGQYESHTAFTLPGLY-RVVHGIDV---FDPKFNIVSPGADMS--I 532
Query: 438 AQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDV-----MRFLTNPHKPMILALSRPDPK 492
T E LT + ++SDV + L + KP++ ++R D
Sbjct: 533 YFPYTEE-KRRLTKFHSEIE-------ELLYSDVENKEHLCVLKDKKKPILFTMARLDRV 584
Query: 493 KNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVA 552
KN++ L++ +G+ LRELANL ++ G+R E + + + + LI++Y L GQ
Sbjct: 585 KNLSGLVEWYGKNTRLRELANLVVVGGDRRK-ESKDNEEKAEMKKMYDLIEEYKLNGQFR 643
Query: 553 Y-PKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIH 611
+ + E+YR TKG F+ PAL E FGLT++EA GLP AT GGP +I
Sbjct: 644 WISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEII 703
Query: 612 RALNNGLLVDPH--DQQA--IADALLKLVSEKNLWVECRKNGWKNIH-LFSWPEHCRTYL 666
+G +DP+ DQ A +AD K + + W E K G + I ++W + + L
Sbjct: 704 VHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLL 763
Query: 667 T 667
T
Sbjct: 764 T 764
|
|
| TAIR|locus:2084756 SUS4 "AT3G43190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 272 (100.8 bits), Expect = 9.7e-20, P = 9.7e-20
Identities = 96/360 (26%), Positives = 165/360 (45%)
Query: 328 NVPMVLTGHSLGRNK--LEQLLKQGRQSKEDI-----NSTYKIMRRIEGEELSLDAAELV 380
N+ L H LG + + L++ + DI + Y + + ++++ + +
Sbjct: 419 NLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDEKYHFSCQFTADLIAMNHTDFI 478
Query: 381 ITSTKQEIDEQWGLYDGFDVKLEKVLRA--RARRGVNCHGRYMPRMVVIPPGMDFSNVVA 438
ITST QEI ++ L R G++ + P+ ++ PG D S A
Sbjct: 479 ITSTFQEIAGSKDTVGQYESHRSFTLPGLYRVVHGIDV---FDPKFNIVSPGADMSIYFA 535
Query: 439 QEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDV-----MRFLTNPHKPMILALSRPDPKK 493
+ LT+ + ++SDV + L + KP+I ++R D K
Sbjct: 536 YTEEKR---RLTAF-------HLEIEELLYSDVENEEHLCVLKDKKKPIIFTMARLDRVK 585
Query: 494 NITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAY 553
N++ L++ +G+ LREL NL ++ G+R E + + + + +LI++Y L GQ +
Sbjct: 586 NLSGLVEWYGKNTRLRELVNLVVVGGDRRK-ESQDNEEKAEMKKMYELIEEYKLNGQFRW 644
Query: 554 -PKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHR 612
+ E+YR TKG F+ PAL E FGLT++EA GLP AT NGGP +I
Sbjct: 645 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIV 704
Query: 613 ALNNGLLVDPH--DQQA--IADALLKLVSEKNLWVECRKNGWKNIH-LFSWPEHCRTYLT 667
+G +DP+ D+ A +AD K + + W + G + I ++W + + LT
Sbjct: 705 HGKSGFHIDPYHGDKAAESLADFFTKCKHDPSHWDQISLGGLERIQEKYTWQIYSQRLLT 764
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q43876 | SPSA_VICFA | 2, ., 4, ., 1, ., 1, 4 | 0.5793 | 0.9737 | 0.9811 | N/A | no |
| Q8RY24 | SPSA3_ARATH | 2, ., 4, ., 1, ., 1, 4 | 0.7819 | 0.9859 | 0.9905 | yes | no |
| P31927 | SPSA_MAIZE | 2, ., 4, ., 1, ., 1, 4 | 0.6963 | 0.9793 | 0.9784 | N/A | no |
| P31928 | SPSA_SPIOL | 2, ., 4, ., 1, ., 1, 4 | 0.5744 | 0.9634 | 0.9734 | N/A | no |
| Q6ZHZ1 | SPSA4_ORYSJ | 2, ., 4, ., 1, ., 1, 4 | 0.5470 | 0.9615 | 0.9624 | yes | no |
| Q43845 | SPSA_SOLTU | 2, ., 4, ., 1, ., 1, 4 | 0.5743 | 0.9690 | 0.9819 | N/A | no |
| P49031 | SPSA_BETVU | 2, ., 4, ., 1, ., 1, 4 | 0.5724 | 0.9540 | 0.9741 | N/A | no |
| Q0JGK4 | SPSA1_ORYSJ | 2, ., 4, ., 1, ., 1, 4 | 0.6792 | 0.9756 | 0.9603 | yes | no |
| A2WYE9 | SPSA1_ORYSI | 2, ., 4, ., 1, ., 1, 4 | 0.6792 | 0.9756 | 0.9603 | N/A | no |
| O22060 | SPSA1_CITUN | 2, ., 4, ., 1, ., 1, 4 | 0.5879 | 0.9737 | 0.9829 | N/A | no |
| O04933 | SPSA2_CRAPL | 2, ., 4, ., 1, ., 1, 4 | 0.7706 | 0.9896 | 0.9768 | N/A | no |
| O04932 | SPSA1_CRAPL | 2, ., 4, ., 1, ., 1, 4 | 0.5830 | 0.9343 | 0.9459 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| fgenesh4_pm.C_LG_I000988 | hypothetical protein (1069 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| eugene3.00440147 | sucrose synthase (EC-2.4.1.13) (815 aa) | • | • | • | 0.915 | ||||||
| PtrSuSY1 | sucrose synthase (EC-2.4.1.13) (805 aa) | • | • | • | 0.915 | ||||||
| estExt_Genewise1_v1.C_1220111 | sucrose synthase (EC-2.4.1.13) (801 aa) | • | • | • | 0.915 | ||||||
| PtrSuSY2 | sucrose synthase (EC-2.4.1.13) (803 aa) | • | • | • | 0.915 | ||||||
| estExt_fgenesh4_pm.C_LG_II0867 | sucrose synthase (EC-2.4.1.13) (812 aa) | • | • | • | 0.914 | ||||||
| gw1.XIII.2344.1 | hypothetical protein (409 aa) | • | 0.899 | ||||||||
| gw1.IV.2527.1 | trehalose-6-phosphate synthase (769 aa) | • | 0.899 | ||||||||
| gw1.5051.2.1 | hypothetical protein (250 aa) | • | 0.899 | ||||||||
| fgenesh4_pg.C_scaffold_9882000001 | annotation not avaliable (198 aa) | • | 0.899 | ||||||||
| fgenesh4_pg.C_LG_III000738 | hypothetical protein (861 aa) | • | 0.899 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1067 | |||
| TIGR02468 | 1050 | TIGR02468, sucrsPsyn_pln, sucrose phosphate syntha | 0.0 | |
| TIGR02472 | 439 | TIGR02472, sucr_P_syn_N, sucrose-phosphate synthas | 1e-177 | |
| cd03800 | 398 | cd03800, GT1_Sucrose_synthase, This family is most | 1e-154 | |
| TIGR02470 | 784 | TIGR02470, sucr_synth, sucrose synthase | 6e-43 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 7e-34 | |
| PLN00142 | 815 | PLN00142, PLN00142, sucrose synthase | 2e-31 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 5e-25 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 6e-24 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 1e-22 | |
| cd03809 | 365 | cd03809, GT1_mtfB_like, This family is most closel | 2e-22 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 3e-17 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 7e-17 | |
| cd03807 | 365 | cd03807, GT1_WbnK_like, This family is most closel | 1e-16 | |
| pfam05116 | 247 | pfam05116, S6PP, Sucrose-6F-phosphate phosphohydro | 6e-16 | |
| cd03814 | 364 | cd03814, GT1_like_2, This family is most closely r | 1e-15 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 1e-15 | |
| TIGR03449 | 405 | TIGR03449, mycothiol_MshA, D-inositol-3-phosphate | 2e-15 | |
| cd04949 | 372 | cd04949, GT1_gtfA_like, This family is most closel | 2e-15 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 2e-15 | |
| TIGR02471 | 236 | TIGR02471, sucr_syn_bact_C, sucrose phosphate synt | 3e-13 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 2e-12 | |
| cd03821 | 375 | cd03821, GT1_Bme6_like, This family is most closel | 6e-12 | |
| cd03795 | 357 | cd03795, GT1_like_4, This family is most closely r | 4e-10 | |
| cd04962 | 371 | cd04962, GT1_like_5, This family is most closely r | 5e-10 | |
| cd03823 | 359 | cd03823, GT1_ExpE7_like, This family is most close | 6e-10 | |
| cd03825 | 365 | cd03825, GT1_wcfI_like, This family is most closel | 9e-10 | |
| cd04951 | 360 | cd04951, GT1_WbdM_like, This family is most closel | 2e-09 | |
| cd03799 | 355 | cd03799, GT1_amsK_like, This is a family of GT1 gl | 3e-09 | |
| TIGR03088 | 374 | TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH | 5e-09 | |
| cd03822 | 366 | cd03822, GT1_ecORF704_like, This family is most cl | 7e-09 | |
| cd03819 | 355 | cd03819, GT1_WavL_like, This family is most closel | 1e-08 | |
| TIGR03999 | 374 | TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin | 2e-08 | |
| cd05844 | 367 | cd05844, GT1_like_7, Glycosyltransferases catalyze | 4e-08 | |
| pfam13579 | 158 | pfam13579, Glyco_trans_4_4, Glycosyl transferase 4 | 6e-08 | |
| cd03813 | 475 | cd03813, GT1_like_3, This family is most closely r | 7e-08 | |
| TIGR04047 | 373 | TIGR04047, MSMEG_0565_glyc, glycosyltransferase, M | 1e-07 | |
| TIGR02149 | 388 | TIGR02149, glgA_Coryne, glycogen synthase, Coryneb | 4e-07 | |
| pfam00862 | 550 | pfam00862, Sucrose_synth, Sucrose synthase | 9e-07 | |
| cd03804 | 351 | cd03804, GT1_wbaZ_like, This family is most closel | 1e-06 | |
| cd03796 | 398 | cd03796, GT1_PIG-A_like, This family is most close | 4e-06 | |
| cd03805 | 392 | cd03805, GT1_ALG2_like, This family is most closel | 1e-05 | |
| TIGR01485 | 249 | TIGR01485, SPP_plant-cyano, sucrose-6F-phosphate p | 2e-05 | |
| cd03794 | 394 | cd03794, GT1_wbuB_like, This family is most closel | 2e-05 | |
| cd03812 | 358 | cd03812, GT1_CapH_like, This family is most closel | 4e-05 | |
| cd03802 | 335 | cd03802, GT1_AviGT4_like, This family is most clos | 8e-05 | |
| PRK15427 | 406 | PRK15427, PRK15427, colanic acid biosynthesis glyc | 1e-04 | |
| pfam13692 | 134 | pfam13692, Glyco_trans_1_4, Glycosyl transferases | 1e-04 | |
| cd03792 | 372 | cd03792, GT1_Trehalose_phosphorylase, Trehalose ph | 3e-04 | |
| TIGR04063 | 397 | TIGR04063, stp3, PEP-CTERM/exosortase A-associated | 5e-04 | |
| cd03791 | 476 | cd03791, GT1_Glycogen_synthase_DULL1_like, This fa | 6e-04 | |
| TIGR04157 | 406 | TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG | 0.004 | |
| PRK15484 | 380 | PRK15484, PRK15484, lipopolysaccharide 1,2-N-acety | 0.004 |
| >gnl|CDD|233879 TIGR02468, sucrsPsyn_pln, sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Score = 1883 bits (4879), Expect = 0.0
Identities = 708/1068 (66%), Positives = 844/1068 (79%), Gaps = 25/1068 (2%)
Query: 1 MAGNEWINGYLEAILDSGASAIEEQQKQAPVNLADRGHFNPTKYFVEEVVTSVDETDLYR 60
MAGN+WIN YLEAILD G + + A + L +RG F+PT+YFVEEV+T DETDL+R
Sbjct: 1 MAGNDWINSYLEAILDVGPGLDDAKS-SALLLLRERGRFSPTRYFVEEVITGFDETDLHR 59
Query: 61 TWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQRLANRRLEREQGRRDVTED 120
TW+K VATR+ +ER++RLENMCWRIW+L RKKKQLEWEE QRLA RRLERE+GRR+ T D
Sbjct: 60 TWVKAVATRSPQERNTRLENMCWRIWNLARKKKQLEWEEAQRLAKRRLERERGRREATAD 119
Query: 121 MSEDLSEGEKGDGVGEIQT---PDTPRKKFQRNFSNLEV--WSDDKKEKKLYIVLISLHG 175
MSEDLSEGEKGD G+I + + + R SNLE+ WSD +KEKKLYIVLISLHG
Sbjct: 120 MSEDLSEGEKGDVAGDISVAGGEPSTKGRLPRISSNLEMETWSDQQKEKKLYIVLISLHG 179
Query: 176 LVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEM 235
LVRGENMELGRDSDTGGQ+KYVVELARAL MPGVYRVDL +RQVSSP+VDWSYGEP EM
Sbjct: 180 LVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEM 239
Query: 236 LT-GGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVL 294
LT E+DG E+GESSGAYIIRIPFGPRDKY+ KE LWPYI EFVDGAL+H +NMSKVL
Sbjct: 240 LTPRSSENDGDEMGESSGAYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHIVNMSKVL 299
Query: 295 GEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSK 354
GEQIG G PVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGR+KLEQLLKQGR SK
Sbjct: 300 GEQIGSGHPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSK 359
Query: 355 EDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGV 414
E+INSTYKIMRRIE EELSLDA+E+VITST+QEI+EQWGLYDGFDV LE+ LRARARRGV
Sbjct: 360 EEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGLYDGFDVILERKLRARARRGV 419
Query: 415 NCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRF 474
+C+GR+MPRM VIPPGM+FS++V DG++ G + K P IWS++MRF
Sbjct: 420 SCYGRFMPRMAVIPPGMEFSHIVPH------DGDMDGETEGNEEHPAKPDPPIWSEIMRF 473
Query: 475 LTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASV 534
TNP KPMILAL+RPDPKKNITTL+KAFGECRPLRELANLTLIMGNRDDI+EMSSG++SV
Sbjct: 474 FTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSGSSSV 533
Query: 535 LITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAA 594
L +VLKLIDKYDLYGQVAYPKHHKQ DVP+IYRLAAKTKGVFINPA +EPFGLTLIEAAA
Sbjct: 534 LTSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAA 593
Query: 595 HGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIH 654
HGLPMVATKNGGPVDIHR L+NGLLVDPHDQQAIADALLKLV++K LW ECR+NG KNIH
Sbjct: 594 HGLPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQLWAECRQNGLKNIH 653
Query: 655 LFSWPEHCRTYLTRVAACRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMSLRLSVDGD 714
LFSWPEHC+TYL+R+A+CR RHPQWQ DT E A+E+ S DSL+D+QD+SL LSVDGD
Sbjct: 654 LFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSVDGD 713
Query: 715 KSSLNGSLDYTAASSGDPVQDQVKRVLSKIKKPDSDSNDKEAEKKLLENVVSKYPMLRRR 774
K S NGS + P D+V ++ + ++ S S + K + KYP LRRR
Sbjct: 714 KESNNGSSN---VEGSGPPADRVAKIENAVRSW-SKSPKGSSAKAQQGSGAGKYPALRRR 769
Query: 775 RRLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLN 834
+RL VIA+DCYD DK ++QI+ ++F+AVR + + +GF LST+M +SE FL
Sbjct: 770 KRLFVIAVDCYD-----DKDLLQIIKNIFEAVRKE-RMEGSSGFILSTSMTISEIQSFLK 823
Query: 835 SMKIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLM 894
S + +FDALIC+SG E+YYP E GKL D DY SHI+YRWG +GL+KT+ K
Sbjct: 824 SGGLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWA 883
Query: 895 NTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDLRQKLRMRGLRCHPMYC 954
+ +N ++ED++SS HC ++ +KDPSK + +LR+ LR++GLRCH +YC
Sbjct: 884 ASINEK-KGENEEQIVEEDEESSTDHCYAFKVKDPSKVPPVKELRKLLRIQGLRCHAVYC 942
Query: 955 RNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKG 1014
RN TR+ ++PLLASRSQALRYLFVRW + +ANM V +GESGDTDYE L+ G HKT+I+KG
Sbjct: 943 RNGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKG 1002
Query: 1015 VVEKGSEELLRTTN-LRDDIVPSESPLIAHVNANAKVDEIANALRQVG 1061
VV +GSE+L + DD+VP +SP I + D+I++AL+++
Sbjct: 1003 VVSRGSEQLHANRSYPLDDVVPLDSPNIVQATGGSSSDDISDALKKLS 1050
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. Length = 1050 |
| >gnl|CDD|131525 TIGR02472, sucr_P_syn_N, sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Score = 524 bits (1352), Expect = e-177
Identities = 237/505 (46%), Positives = 304/505 (60%), Gaps = 74/505 (14%)
Query: 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEV 225
LY++L+SLHGL+RG ++ELGRD+DTGGQ KYV+ELARALAR V +VDL +R + +V
Sbjct: 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKV 60
Query: 226 DWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALA 285
Y +P E + + GA I+R+PFGPR +YLRKELLWPY+ E D L
Sbjct: 61 SPDYAQPIERI-------------APGARIVRLPFGPR-RYLRKELLWPYLDELADNLLQ 106
Query: 286 HCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQ 345
H Q P +IH HYADAG A LS L VP++ TGHSLGR K +
Sbjct: 107 HLRQ------------QGHLPDLIHAHYADAGYVGARLSRLLGVPLIFTGHSLGREKRRR 154
Query: 346 LLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKV 405
LL G + ++ I Y I RRIE EE +L A LVITST QEI+EQ+ LYD + +
Sbjct: 155 LLAAGLKPQQ-IEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQPE---- 209
Query: 406 LRARARRGVNCHGRYMPRMVVIPPGMD---FSNVVAQEDTPEVDGELTSLIGGTDGSSPK 462
RM VIPPG+D F + E+T E+D L
Sbjct: 210 -----------------RMQVIPPGVDLSRFYPPQSSEETSEIDNLLA------------ 240
Query: 463 AIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRD 522
FL +P KP ILA+SRPD +KNI +L++A+G L+E+ANL L++G RD
Sbjct: 241 ----------PFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMANLVLVLGCRD 290
Query: 523 DIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALV 582
DI +M S VL VL LID+YDLYG+VAYPKHH+ DVPE+YRLAA+++G+F+NPAL
Sbjct: 291 DIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALT 350
Query: 583 EPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLW 642
EPFGLTL+EAAA GLP+VAT +GGP DI NGLLVD D +AIA AL +S+ + W
Sbjct: 351 EPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSDSSQW 410
Query: 643 VECRKNGWKNIHL-FSWPEHCRTYL 666
+NG + + +SW H YL
Sbjct: 411 QLWSRNGIEGVRRHYSWDAHVEKYL 435
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. Length = 439 |
| >gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 462 bits (1191), Expect = e-154
Identities = 174/502 (34%), Positives = 230/502 (45%), Gaps = 105/502 (20%)
Query: 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVD 226
I LISLHG + +DTGGQ YV+ELARALAR+ + VD+F+R++
Sbjct: 1 RIALISLHGSPLAQPGG----ADTGGQNVYVLELARALARL--GHEVDIFTRRIDDALPP 54
Query: 227 WSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAH 286
V + G ++R+P GP +YL KE LWPY+ EF D L
Sbjct: 55 I-------------------VELAPGVRVVRVPAGPA-EYLPKEELWPYLDEFADDLLRF 94
Query: 287 CLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQL 346
+ P +IH HY D+G A LL+ L +P+V T HSLG K L
Sbjct: 95 LR------------REGGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHSLGAVKRRHL 142
Query: 347 LKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVL 406
TY+ RRIE EE L AA+ VI ST QE +E + LY
Sbjct: 143 GAAD---------TYEPARRIEAEERLLRAADRVIASTPQEAEELYSLY----------- 182
Query: 407 RARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPA 466
G Y R+ V+PPG+D
Sbjct: 183 -----------GAYPRRIRVVPPGVDLERFTPYGRA------------------------ 207
Query: 467 IWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEE 526
+ R L +P KP ILA+ R DP+K I TL++A+ E LRE ANL ++ G RDDI
Sbjct: 208 -EARRARLLRDPDKPRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILA 266
Query: 527 MSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFG 586
M L L +ID+ D +P + D+P +YR A VF+NPAL EPFG
Sbjct: 267 MDEEELRELARELGVIDRVD------FPGRVSREDLPALYRAA----DVFVNPALYEPFG 316
Query: 587 LTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECR 646
LT +EA A GLP+VAT GGP DI GLLVDP D +A+A AL +L+++ L
Sbjct: 317 LTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLS 376
Query: 647 KNGWKNIH-LFSWPEHCRTYLT 667
+ G + ++W L
Sbjct: 377 RAGLRRARARYTWERVAARLLE 398
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398 |
| >gnl|CDD|233881 TIGR02470, sucr_synth, sucrose synthase | Back alignment and domain information |
|---|
Score = 168 bits (428), Expect = 6e-43
Identities = 140/550 (25%), Positives = 249/550 (45%), Gaps = 114/550 (20%)
Query: 168 IVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALAR-------MPGVY---RVDLFS 217
+V++S HG EN+ LG DTGGQ+ Y+++ RAL + G+ ++ + +
Sbjct: 258 VVILSPHGYFGQENV-LGLP-DTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVT 315
Query: 218 RQVSSPEVDWSY-GEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRD-KYLRKEL---- 271
R + P+ + + + E + G + A+I+R+PF + LR +
Sbjct: 316 RLI--PDAEGTTCNQRLEKVYG-----------TEHAWILRVPFRTENGIILRNWISRFE 362
Query: 272 LWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPM 331
+WPY++ F + A K + ++ G P +I G+Y+D A+LL+ L V
Sbjct: 363 IWPYLETFAEDA-------EKEILAELQGK----PDLIIGNYSDGNLVASLLARKLGVTQ 411
Query: 332 VLTGHSLGRNK-LEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEI-- 388
H+L + K + + ++ Y + + ++++AA+ +ITST QEI
Sbjct: 412 CTIAHALEKTKYPDSDIYW-----QEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAG 466
Query: 389 ----DEQW---------GLY---DGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMD 432
Q+ GLY G DV + P+ ++ PG D
Sbjct: 467 TKDSVGQYESHQAFTMPGLYRVVHGIDV-------------------FDPKFNIVSPGAD 507
Query: 433 ----FSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSR 488
F ++ + E+ L+ + + +L +P+KP+I +++R
Sbjct: 508 ESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDE---------HYGYLKDPNKPIIFSMAR 558
Query: 489 PDPKKNITTLLKAFGECRPLRELANLTLIMGNRD-----DIEEMSSGNASVLITVLKLID 543
D KN+T L++ +G LREL NL ++ G D D EE + + LID
Sbjct: 559 LDRVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIE-----KMHNLID 613
Query: 544 KYDLYGQVAYPKHH-KQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVAT 602
+Y L+GQ+ + + E+YR A TKG+F+ PAL E FGLT++EA GLP AT
Sbjct: 614 QYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFAT 673
Query: 603 KNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSE----KNLWVECRKNGWKNIH-LFS 657
+ GGP++I + +G +DP+ + A+ ++ + + W + + G + I+ ++
Sbjct: 674 RFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYT 733
Query: 658 WPEHCRTYLT 667
W + LT
Sbjct: 734 WKIYSERLLT 743
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 784 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 134 bits (338), Expect = 7e-34
Identities = 104/482 (21%), Positives = 170/482 (35%), Gaps = 131/482 (27%)
Query: 191 GGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGES 250
GG ++V+ELARALA + V + + G P+++ +
Sbjct: 14 GGAERHVLELARALAARG--HEVTVLTPGDG----------------GLPDEEEVGGIVV 55
Query: 251 SGAYIIRIPFGPRDKYLRKELLWPYIQEF-VDGALAHCLNMSKVLGEQIGGGQPVWPYVI 309
+ L L ++ D V+
Sbjct: 56 VRPPPLLRVRRLLLLLLLALRLRRLLRRERFD--------------------------VV 89
Query: 310 HGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEG 369
H H A +AAL + L +P+VLT H L GR E
Sbjct: 90 HAHDWLALLAAALAARLLGIPLVLTVHGLEF---------GRPGNELGLLLKLARAL--- 137
Query: 370 EELSLDAAELVIT---STKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVV 426
E +L A+ +I +T++E+ G ++ V
Sbjct: 138 ERRALRRADRIIAVSEATREEL-------------------------RELGGVPPEKITV 172
Query: 427 IPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILAL 486
IP G+D + PA + R +P+IL +
Sbjct: 173 IPNGVDT---------------------------ERFRPAPRAARRRLGIPEDEPVILFV 205
Query: 487 SRPDPKKNITTLLKAFGECRPLRELANLTLIM-GNRDDIEEMSSGNASVLITVLKLIDKY 545
R P+K + LL+A + R +E ++ L++ G+ EE+ L +
Sbjct: 206 GRLVPRKGVDLLLEALAKLR--KEYPDVRLVIVGDGPLREEL-----------EALAAEL 252
Query: 546 DLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNG 605
L +V + D+P +Y A VF+ P+L E FGL L+EA A GLP+VA+ G
Sbjct: 253 GLGDRVTFLGFVPDEDLPALYAAAD----VFVLPSLYEGFGLVLLEAMAAGLPVVASDVG 308
Query: 606 GPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRT 664
G ++ GLLV P D +A+A+A+L+L+ + L + + + FSW
Sbjct: 309 GIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPELRRRLGEAARERVAERFSWDRVAAR 368
Query: 665 YL 666
Sbjct: 369 TE 370
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|215073 PLN00142, PLN00142, sucrose synthase | Back alignment and domain information |
|---|
Score = 132 bits (334), Expect = 2e-31
Identities = 150/528 (28%), Positives = 242/528 (45%), Gaps = 98/528 (18%)
Query: 168 IVLISLHGLVRGENMELGRDSDTGGQIKYVVELARA-----LARMPG-----VYRVDLFS 217
+V+ S HG N+ LG DTGGQ+ Y+++ RA L R+ ++ + +
Sbjct: 282 VVIFSPHGYFGQANV-LGL-PDTGGQVVYILDQVRALENEMLLRIKQQGLDIKPQILIVT 339
Query: 218 RQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKEL----LW 273
R + P+ A+ T + + E S +I+R+PF LRK + +W
Sbjct: 340 RLI--PD--------AKGTTCNQRLEKVSGTEHS--HILRVPFRTEKGILRKWISRFDVW 387
Query: 274 PYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVL 333
PY++ F + A S++L E G P +I G+Y+D A+LL+ L V
Sbjct: 388 PYLETFAEDA------ASEILAELQGK-----PDLIIGNYSDGNLVASLLAHKLGVTQCT 436
Query: 334 TGHSLGRNKLEQLLKQGRQSKEDI-----NSTYKIMRRIEGEELSLDAAELVITSTKQEI 388
H+L + K DI + Y + + ++++ A+ +ITST QEI
Sbjct: 437 IAHALEKTKYPD---------SDIYWKKFDDKYHFSCQFTADLIAMNHADFIITSTYQEI 487
Query: 389 ---DEQWGLYDG---FDVK-LEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQED 441
+ G Y+ F + L +V+ G++ + P+ ++ PG D S +
Sbjct: 488 AGSKDTVGQYESHTAFTLPGLYRVVH-----GIDV---FDPKFNIVSPGADMS--IYFPY 537
Query: 442 TPEVDGELTSLIGGTDGSSPKAIPAIWSDV-----MRFLTNPHKPMILALSRPDPKKNIT 496
T E LTSL P ++S + +L + KP+I +++R D KN+T
Sbjct: 538 T-EKQKRLTSL-------HPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLT 589
Query: 497 TLLKAFGECRPLRELANLTLIMGNRD-----DIEEMSSGNASVLITVLKLIDKYDLYGQV 551
L++ +G+ + LREL NL ++ G D D EE++ + LI+KY+L GQ
Sbjct: 590 GLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIK-----KMHSLIEKYNLKGQF 644
Query: 552 AYPKHHK-QYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDI 610
+ + E+YR A TKG F+ PAL E FGLT++EA GLP AT GGP +I
Sbjct: 645 RWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEI 704
Query: 611 HRALNNGLLVDP-HDQQA---IADALLKLVSEKNLWVECRKNGWKNIH 654
+G +DP H +A IAD K + + W + G + I+
Sbjct: 705 IVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIY 752
|
Length = 815 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 108 bits (269), Expect = 5e-25
Identities = 53/201 (26%), Positives = 88/201 (43%), Gaps = 16/201 (7%)
Query: 467 IWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEE 526
+ L K ++L + R DP+K + L++A + + L ++ + EE
Sbjct: 186 FAPARIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPERREE 245
Query: 527 MSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFG 586
+ KL K L V + + ++ E+ A VF+ P+L E FG
Sbjct: 246 L-----------EKLAKKLGLEDNVKFLGYVPDEELAELLASAD----VFVLPSLSEGFG 290
Query: 587 LTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECR 646
L L+EA A G P++A+ GG ++ GLLV P D + +ADAL +L+ + L E
Sbjct: 291 LVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDPELREELG 350
Query: 647 KNGWKNI-HLFSWPEHCRTYL 666
+ + + FSW L
Sbjct: 351 EAARERVEEEFSWERIAEQLL 371
|
Length = 381 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 98.9 bits (247), Expect = 6e-24
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 18/173 (10%)
Query: 480 KPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIM-GNRDDIEEMSSGNASVLITV 538
KP+IL + R P+K + LL+AF + NL L++ G+ ++ +++
Sbjct: 2 KPIILFVGRLVPEKGLDLLLEAFA--LLKEQHPNLKLVIVGDGEEEKKLK---------- 49
Query: 539 LKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLP 598
KL K L V + D+ E+YR+A +F+ P+ E FGL L+EA A G+P
Sbjct: 50 -KLALKLGLEDNVIFVGFVPDEDLIELYRIA----DLFVLPSRYEGFGLVLLEAMAAGVP 104
Query: 599 MVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWK 651
++AT GGP +I + GLLVDP D +A+A+A+ KL+ ++ L +N K
Sbjct: 105 VIATDVGGPAEIVKDGETGLLVDPGDAEALAEAIEKLLKDEELRERLGENARK 157
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 1e-22
Identities = 96/365 (26%), Positives = 143/365 (39%), Gaps = 93/365 (25%)
Query: 308 VIHGHYA-DAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRR 366
+IH H+A G +AALL L +P+V+T H D+N +
Sbjct: 96 LIHAHFAYPDGFAAALLKRKLGIPLVVTLHG-----------------SDVNLLPRKRLL 138
Query: 367 IEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVV 426
+L A+ VI ++ L + G ++ V
Sbjct: 139 RALLRRALRRADAVIAVSEA-------------------LADELKA----LGIDPEKVTV 175
Query: 427 IPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILAL 486
IP G VD E S PA ++ + K +IL +
Sbjct: 176 IPNG--------------VDTERFS-------------PADRAEARKLGLPEDKKVILFV 208
Query: 487 SRPDPKKNITTLLKAFGECRPLRELANLTLIMGN---RDDIEEMSSGNASVLITVLKLID 543
R P+K I L++A R +L +I+G+ R+ +E L L L D
Sbjct: 209 GRLVPRKGIDYLIEALARLLKKRPDVHL-VIVGDGPLREALEA--------LAAELGLED 259
Query: 544 KYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATK 603
+ G V H +VP Y A VF+ P+L E FGL L+EA A GLP+VAT
Sbjct: 260 RVTFLGAVP---HE---EVPAYYAAA----DVFVLPSLREGFGLVLLEAMACGLPVVATD 309
Query: 604 NGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKN-IHLFSWPEHC 662
GG +I NGLLV P D +A+A+A+L+L+++ W+ + + FSW
Sbjct: 310 VGGIPEIITDGENGLLVPPGDPEALAEAILRLLADP--WLRLGRAARRRVAERFSWENVA 367
Query: 663 RTYLT 667
L
Sbjct: 368 ERLLE 372
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 2e-22
Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 35/199 (17%)
Query: 477 NPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLI 536
+P L + +P+KN+ LL+AF L +I+G R + E
Sbjct: 192 LLPRPYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKL-VIVGKRGWLNE---------- 240
Query: 537 TVLKLIDKYDLYGQVAYPKHHKQY----DVPEIYRLAAKTKGVFINPALVEPFGLTLIEA 592
+L + + L +V Y ++ +YR A F+ P+L E FGL ++EA
Sbjct: 241 ELLARLRELGLGDRV----RFLGYVSDEELAALYRGAR----AFVFPSLYEGFGLPVLEA 292
Query: 593 AAHGLPMVATKNGGPVDIHRAL-----NNGLLVDPHDQQAIADALLKLVSEKNLWVECRK 647
A G P++A+ +L + L DP D +A+A A+ +L+ + L E R+
Sbjct: 293 MACGTPVIASNIS-------SLPEVAGDAALYFDPLDPEALAAAIERLLEDPALREELRE 345
Query: 648 NGWKNIHLFSWPEHCRTYL 666
G FSW + R L
Sbjct: 346 RGLARAKRFSWEKTARRTL 364
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 81.9 bits (202), Expect = 3e-17
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 15/139 (10%)
Query: 482 MILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKL 541
+ + R P+K + L++AF + L + + +L
Sbjct: 106 DKVFVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPEREYL------------EEL 153
Query: 542 IDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVA 601
+ L +V + ++ + AA VF+ P+L E FGL ++EA A GLP++A
Sbjct: 154 LAALLLLDRVIFLGGLDPEELLALLLAAAD---VFVLPSLREGFGLVVLEAMACGLPVIA 210
Query: 602 TKNGGPVDIHRALNNGLLV 620
T GGP +I GLLV
Sbjct: 211 TDVGGPPEIVEDGLTGLLV 229
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 83.2 bits (206), Expect = 7e-17
Identities = 53/178 (29%), Positives = 80/178 (44%), Gaps = 24/178 (13%)
Query: 461 PKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGN 520
+ I A+ + + P P+ILA+ R P+K TL++AF R A L +I+G+
Sbjct: 170 IEEIRALAEEPLELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARL-VILGD 228
Query: 521 ---RDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFI 577
R+++E L L L D+ G + + + A +F+
Sbjct: 229 GPLREELEA--------LAKELGLADRVHFLGFQS--------NPYPYLKAAD----LFV 268
Query: 578 NPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKL 635
+ E F L+EA A G P+VAT GP +I NGLLV D+ A+A A L L
Sbjct: 269 LSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALAL 326
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
| >gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 82.6 bits (205), Expect = 1e-16
Identities = 63/275 (22%), Positives = 101/275 (36%), Gaps = 57/275 (20%)
Query: 380 VITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNC----------HGRYMPRMVVIPP 429
VI + + +L ++L + V G ++VVIP
Sbjct: 107 VIWGIRHSDLDLGKKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQAIGYPPKKIVVIPN 166
Query: 430 GMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRP 489
G+D D E L +I ++R
Sbjct: 167 GVDTERFSPDLDARARLREELGL------------------------PEDTFLIGIVARL 202
Query: 490 DPKKNITTLLKAFGECRPLRELANLTLI--MGNRDDIEEMSSGNASVLITVLKLIDKYDL 547
P+K+ TLL+A A L L+ +R ++E + + L L DK L
Sbjct: 203 HPQKDHATLLRAAALLLKKFPNARLLLVGDGPDRANLELL-------ALKELGLEDKVIL 255
Query: 548 YGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP 607
G+ + DVP + VF+ +L E F L+EA A GLP+VAT G
Sbjct: 256 LGERS--------DVPALLNAL----DVFVLSSLSEGFPNVLLEAMACGLPVVATDVGDN 303
Query: 608 VDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLW 642
++ + G LV P D +A+A+A+ L+++ L
Sbjct: 304 AEL--VGDTGFLVPPGDPEALAEAIEALLADPALR 336
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365 |
| >gnl|CDD|218442 pfam05116, S6PP, Sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Score = 78.4 bits (194), Expect = 6e-16
Identities = 58/192 (30%), Positives = 86/192 (44%), Gaps = 32/192 (16%)
Query: 844 DALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENS 903
D LI S G E+YY G L PD + H+DY W ++ + + + G
Sbjct: 62 DVLITSVGTEIYY-------GPSLVPDQAWQEHLDYGWD----RQAVVEALAKFPGLT-- 108
Query: 904 KNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIV 963
+Q +++ H +SY + + + +L Q L RGL +Y + + I+
Sbjct: 109 ------LQPEEEQR-PHKVSYFLDPEAAPAVLKELEQLLEKRGLDVKVIY-SSGRDLDIL 160
Query: 964 PLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGV-VEKGSEE 1022
PL AS+ QALRYL +W L N ++ G+SG+ D E I G GV V E
Sbjct: 161 PLRASKGQALRYLAKKWGLPPEN-TLVCGDSGN-DAELFIGGVR------GVVVGNAQPE 212
Query: 1023 LL--RTTNLRDD 1032
LL N RD+
Sbjct: 213 LLQWYLENARDN 224
|
This family consists of Sucrose-6F-phosphate phosphohydrolase proteins found in plants and cyanobacteria. Sucrose-6(F)-phosphate phosphohydrolase catalyzes the final step in the pathway of sucrose biosynthesis. Length = 247 |
| >gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 79.6 bits (197), Expect = 1e-15
Identities = 56/190 (29%), Positives = 79/190 (41%), Gaps = 31/190 (16%)
Query: 478 PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIM-G---NRDDIEEMSSGNAS 533
P +P++L + R P+KN+ LL A PLR + L++ G R +E
Sbjct: 195 PDRPVLLYVGRLAPEKNLEALLDAD---LPLRRRPPVRLVIVGDGPARARLEAR------ 245
Query: 534 VLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAA 593
Y V + ++ Y A VF+ P+ E FGL ++EA
Sbjct: 246 --------------YPNVHFLGFLDGEELAAAYASA----DVFVFPSRTETFGLVVLEAM 287
Query: 594 AHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNI 653
A GLP+VA GGP DI NGLLV+P D +A A AL L+++ L
Sbjct: 288 ASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADPELRRRMAARARAEA 347
Query: 654 HLFSWPEHCR 663
SW
Sbjct: 348 ERRSWEAFLD 357
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 79.2 bits (196), Expect = 1e-15
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 21/187 (11%)
Query: 475 LTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNAS 533
++ ILA+ R P+K L++A+ + ++ + L I+G+ + E +
Sbjct: 173 SSDLKSKRILAVGRLVPQKGFDLLIEAW--AKIAKKHPDWKLRIVGDGPEREAL------ 224
Query: 534 VLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAA 593
LI + L +V K ++ E Y A+ +F+ + E F + L+EA
Sbjct: 225 -----EALIKELGLEDRVILLGFTK--NIEEYYAKAS----IFVLTSRFEGFPMVLLEAM 273
Query: 594 AHGLPMVATK-NGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKN 652
A GLP+++ GP +I NGLLV D +A+A+ALL+L+ ++ L N ++
Sbjct: 274 AFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDEELRKRMGANARES 333
Query: 653 IHLFSWP 659
FS
Sbjct: 334 AERFSIE 340
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|132490 TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase | Back alignment and domain information |
|---|
Score = 79.8 bits (197), Expect = 2e-15
Identities = 107/451 (23%), Positives = 164/451 (36%), Gaps = 101/451 (22%)
Query: 189 DTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVG 248
D GG Y++E A LAR G+ VD+F+R V
Sbjct: 18 DAGGMNVYILETATELARR-GI-EVDIFTRATRP-------------------SQPPVVE 56
Query: 249 ESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYV 308
+ G + + GP + L KE L + F G L +P + +
Sbjct: 57 VAPGVRVRNVVAGPYEG-LDKEDLPTQLCAFTGGVL-----------RAEARHEPGYYDL 104
Query: 309 IHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIE 368
IH HY +G LL VP+V T H+L K + D ++ RRI
Sbjct: 105 IHSHYWLSGQVGWLLRDRWGVPLVHTAHTLAAVK--------NAALADGDTPEPEARRI- 155
Query: 369 GEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIP 428
GE+ +D A+ +I +T +E + YD A R+ V+
Sbjct: 156 GEQQLVDNADRLIANTDEEARDLVRHYD-------------ADPD---------RIDVVA 193
Query: 429 PGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSR 488
PG D P + +G +P ++ + R
Sbjct: 194 PGADLERF-----RPGDRATERARLG---------LP------------LDTKVVAFVGR 227
Query: 489 PDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLY 548
P K LL+A E NL +I+ + S + +++L + +
Sbjct: 228 IQPLKAPDVLLRAVAELLDRDPDRNLRVIV-----VGGPSGSGLATPDALIELAAELGIA 282
Query: 549 GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG-P 607
+V + ++ +YR A V P+ E FGL +EA A G P+VA + GG P
Sbjct: 283 DRVRFLPPRPPEELVHVYRAAD----VVAVPSYNESFGLVAMEAQACGTPVVAARVGGLP 338
Query: 608 VDIHRALNNGLLVDPHDQQAIADALLKLVSE 638
V + GLLVD HD ADAL +L+ +
Sbjct: 339 VAV-ADGETGLLVDGHDPADWADALARLLDD 368
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Length = 405 |
| >gnl|CDD|99998 cd04949, GT1_gtfA_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Score = 78.8 bits (195), Expect = 2e-15
Identities = 52/183 (28%), Positives = 99/183 (54%), Gaps = 23/183 (12%)
Query: 477 NPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVL 535
PHK I+ ++R P+K + L+KAF + ++++ + TL I G D+ E++
Sbjct: 203 KPHK--IITVARLAPEKQLDQLIKAFA--KVVKQVPDATLDIYGYGDEEEKLK------- 251
Query: 536 ITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAH 595
+LI++ L V + + D+ E+Y+ A + + + E FGL+L+EA +H
Sbjct: 252 ----ELIEELGLEDYVFLKGYTR--DLDEVYQKA----QLSLLTSQSEGFGLSLMEALSH 301
Query: 596 GLPMVATK-NGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIH 654
GLP+++ N GP +I NG LV D +A+A+A+++L+++ L + + ++N
Sbjct: 302 GLPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEAIIELLNDPKLLQKFSEAAYENAE 361
Query: 655 LFS 657
+S
Sbjct: 362 RYS 364
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 372 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 78.7 bits (195), Expect = 2e-15
Identities = 48/176 (27%), Positives = 74/176 (42%), Gaps = 17/176 (9%)
Query: 478 PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLIT 537
P+ L ++R K I LL+A + L L+ G+ D+
Sbjct: 186 EDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLV-GDGDEENP----------A 234
Query: 538 VLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGL 597
+ I+K L G+V + DVPE+ A VF+ P+ E L+EA A G
Sbjct: 235 AILEIEKLGLEGRVEFLGFRD--DVPELLAAA----DVFVLPSYREGLPRVLLEAMAMGR 288
Query: 598 PMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNI 653
P++AT G + NG LV P D +A+ADA+ +L+ + L + K
Sbjct: 289 PVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDPELRARMGQAARKRA 344
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|131524 TIGR02471, sucr_syn_bact_C, sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Score = 70.2 bits (172), Expect = 3e-13
Identities = 55/218 (25%), Positives = 87/218 (39%), Gaps = 31/218 (14%)
Query: 806 VRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPGTYTEEGG 865
V L + GF ++T V + + + D LI G E+YY G
Sbjct: 21 VELLRGSGDAVGFGIATGRSVESAKSRYAKLNLPSP--DVLIARVGTEIYY-------GP 71
Query: 866 KLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYL 925
+L PD + HID+ W ++ + + + G +D + ISYL
Sbjct: 72 ELQPDRFWQKHIDHDW----RRQAVVEALADIPG---------LTLQDDQEQGPFKISYL 118
Query: 926 IKDPSKARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVA 985
+ DP + +RQ+LR + + + ++PL AS+ ALRYL RW L +
Sbjct: 119 L-DPEGEPILPQIRQRLRQQSQAAKVILSCGWF-LDVLPLRASKGLALRYLSYRWGLPLE 176
Query: 986 NMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEEL 1023
+ V D EE++ G L + VV EL
Sbjct: 177 QILVAGDSGND---EEMLRG----LTLGVVVGNHDPEL 207
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. Length = 236 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 70.0 bits (172), Expect = 2e-12
Identities = 80/365 (21%), Positives = 140/365 (38%), Gaps = 84/365 (23%)
Query: 309 IHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIE 368
H ++ G ++ L +P+V T H++ + + ++ + K+ RR
Sbjct: 90 THTPFS-LGLLGLRVARKLGIPVVATYHTMYEDYTHYVPLGRLLARAVVR--RKLSRRF- 145
Query: 369 GEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIP 428
+ + VI ++ K+ +LR GV + VIP
Sbjct: 146 -----YNRCDAVIAPSE---------------KIADLLR---EYGVKR------PIEVIP 176
Query: 429 PGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSR 488
G+D + E + +P++L + R
Sbjct: 177 TGIDLDRFEPVDGDDERR--------------------------KLGIPEDEPVLLYVGR 210
Query: 489 PDPKKNITTLLKAFGECRPLRELANLTLIM---GN-RDDIEEMSSGNASVLITVLKLIDK 544
+KNI L++AF R L+E ++ L++ G R+++EE L L L D+
Sbjct: 211 LAKEKNIDFLIRAF--ARLLKEEPDVKLVIVGDGPEREELEE--------LARELGLADR 260
Query: 545 YDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKN 604
G V ++P+ Y+ A +F+ + E GL L+EA A GLP+VA
Sbjct: 261 VIFTGFVPRE------ELPDYYKAA----DLFVFASTTETQGLVLLEAMAAGLPVVAVDA 310
Query: 605 GGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRT 664
G D+ NG L P +A+A+ALL+L+ + L KN ++ FS+ +
Sbjct: 311 PGLPDLVADGENGFLFPP-GDEALAEALLRLLQDPELRRRLSKNAEESAEKFSFAKKVEK 369
Query: 665 YLTRV 669
V
Sbjct: 370 LYEEV 374
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
| >gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 68.5 bits (168), Expect = 6e-12
Identities = 48/198 (24%), Positives = 73/198 (36%), Gaps = 21/198 (10%)
Query: 473 RFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNA 532
+F P K +IL L R PKK + L++AF + + L++ D+
Sbjct: 196 KFPILPDKRIILFLGRLHPKKGLDLLIEAF--AKLAERFPDWHLVIAGPDEGGY------ 247
Query: 533 SVLITVLKLI-DKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIE 591
LK I L +V + D A +F+ P+ E FG+ + E
Sbjct: 248 ---RAELKQIAAALGLEDRVTFTGMLYGEDKAAALADAD----LFVLPSHSENFGIVVAE 300
Query: 592 AAAHGLPMVATKNGGPVDIHRALNNG-LLVDPHDQQAIADALLKLVSEKNLWVECRKNGW 650
A A G P+V T V + G V D A+A AL + + +NG
Sbjct: 301 ALACGTPVVTTDK---VPWQELIEYGCGWVVDDDVDALAAALRRALELPQRLKAMGENGR 357
Query: 651 KNIH-LFSWPEHCRTYLT 667
+ FSW + L
Sbjct: 358 ALVEERFSWTAIAQQLLE 375
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375 |
| >gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 62.6 bits (153), Expect = 4e-10
Identities = 70/348 (20%), Positives = 120/348 (34%), Gaps = 106/348 (30%)
Query: 305 WPYVIHGHYADAGDSAALLSGALNVPMVLTGHS--LGRNKLEQLLKQGRQSKEDINSTYK 362
VIH H+ + ALL P+V+ HS + + L +L +
Sbjct: 83 KADVIHLHFPNPLADLALLLLPRKKPVVVHWHSDIVKQKLLLKLYR-------------P 129
Query: 363 IMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMP 422
+ RR L A+ ++ ++ + VLR +
Sbjct: 130 LQRRF------LRRADAIVATSPNYAETS------------PVLRRFRDK---VR----- 163
Query: 423 RMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPM 482
VIP G+D + + E AIW +P
Sbjct: 164 ---VIPLGLDPARYPRPDALEE---------------------AIW------RRAAGRPF 193
Query: 483 ILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGN----RDDIEEMSSGNASVLITV 538
L + R K + LL+A L + L++ ++E L
Sbjct: 194 FLFVGRLVYYKGLDVLLEA------AAALPDAPLVIVGEGPLEAELEA--------LAAA 239
Query: 539 LKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINP--ALVEPFGLTLIEAAAHG 596
L L+D+ G++ + + VF+ P E FG+ L+EA A G
Sbjct: 240 LGLLDRVRFLGRLD------DEEKAALLAAC----DVFVFPSVERSEAFGIVLLEAMAFG 289
Query: 597 LPMVATKNGG---PVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNL 641
P+++T+ G V++H GL+V P D A+A+A+ +L+ + L
Sbjct: 290 KPVISTEIGTGGSYVNLHGV--TGLVVPPGDPAALAEAIRRLLEDPEL 335
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357 |
| >gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 62.3 bits (152), Expect = 5e-10
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 19/177 (10%)
Query: 473 RFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNA 532
R + +++ +S P K I +++ F + R +E+ L++G+ +
Sbjct: 190 RLGAPEGEKVLIHISNFRPVKRIDDVIRIFAKVR--KEVPARLLLVGDGPERSPA----- 242
Query: 533 SVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEA 592
+L + L V + KQ V E+ +A +F+ P+ E FGL +EA
Sbjct: 243 ------ERLARELGLQDDVLF--LGKQDHVEELLSIA----DLFLLPSEKESFGLAALEA 290
Query: 593 AAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNG 649
A G+P+VA+ GG ++ + G LVD D +A+A+ L L+ + LW E +
Sbjct: 291 MACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDDELWQEFSRAA 347
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371 |
| >gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 61.9 bits (151), Expect = 6e-10
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 583 EPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLW 642
E F L + EA A G+P++A+ GG ++ R NGLL P D + +A AL +L+ + +L
Sbjct: 274 ENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDPDLL 333
Query: 643 VECRKNG 649
R
Sbjct: 334 ERLRAGI 340
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359 |
| >gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 61.5 bits (150), Expect = 9e-10
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 564 EIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPH 623
IY A VF+ P+L E F T IEA A G P+VA GG DI G L P
Sbjct: 260 LIYSAA----DVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPG 315
Query: 624 DQQAIADALLKLVSEKNL 641
D + +A+ + L+++ +
Sbjct: 316 DPEDLAEGIEWLLADPDE 333
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365 |
| >gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Score = 60.8 bits (148), Expect = 2e-09
Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 30/159 (18%)
Query: 483 ILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGN---RDDIEEMSSGNASVLITVL 539
ILA+ R K+ LLKAF + L LI G+ R +E + I L
Sbjct: 191 ILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKL-LIAGDGPLRATLERL--------IKAL 241
Query: 540 KLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPM 599
L ++ L G D+ Y A +F+ + E FGL + EA A LP+
Sbjct: 242 GLSNRVKLLGLR--------DDIAAYYNAA----DLFVLSSAWEGFGLVVAEAMACELPV 289
Query: 600 VATKNGGPVDIHRAL--NNGLLVDPHDQQAIADALLKLV 636
VAT GG R + ++GL+V D +A+A+ + +++
Sbjct: 290 VATDAGGV----REVVGDSGLIVPISDPEALANKIDEIL 324
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360 |
| >gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Score = 59.5 bits (145), Expect = 3e-09
Identities = 57/197 (28%), Positives = 90/197 (45%), Gaps = 39/197 (19%)
Query: 470 DVMRFLTNPHKPM-----ILALSRPDPKKNITTLLKAFGECRPLRELA---NLTLIMG-- 519
D+ RF P P IL++ R KK + LL+A L++ L ++ G
Sbjct: 164 DLERFPPRPPPPPGEPLRILSVGRLVEKKGLDYLLEA---LALLKDRGIDFRLDIV-GDG 219
Query: 520 -NRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFIN 578
RD++E LI L L D+ L G + Q +V E+ R A +F+
Sbjct: 220 PLRDELEA--------LIAELGLEDRVTLLGAKS------QEEVRELLRAAD----LFVL 261
Query: 579 PALV------EPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADAL 632
P++ E + L+EA A GLP+++T G ++ GLLV P D +A+ADA+
Sbjct: 262 PSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGDPEALADAI 321
Query: 633 LKLVSEKNLWVECRKNG 649
+L+ + L E + G
Sbjct: 322 ERLLDDPELRREMGEAG 338
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355 |
| >gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Score = 59.4 bits (144), Expect = 5e-09
Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
Query: 559 QYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGL 618
+ DVP + + +F+ P+L E T++EA A GLP++AT GG ++ + G
Sbjct: 263 RDDVPALMQ----ALDLFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGA 318
Query: 619 LVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHL-FSWPEHCRTYL 666
LV P D A+A AL VS+ G FS Y
Sbjct: 319 LVPPGDAVALARALQPYVSDPAARRAHGAAGRARAEQQFSINAMVAAYA 367
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374 |
| >gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 7e-09
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 588 TLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRK 647
L A G P+++T G ++ GLLV P D A+A+A+ +L+++ L R
Sbjct: 285 VLAYAIGFGKPVISTPVGHAEEV-LDGGTGLLVPPGDPAALAEAIRRLLADPELAQALRA 343
Query: 648 NGWKNIHLFSWPE 660
+ SW
Sbjct: 344 RAREYARAMSWER 356
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366 |
| >gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 1e-08
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 17/181 (9%)
Query: 461 PKAIPAIWSDVMR--FLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIM 518
P A+P + + KP+IL R K ++A + ++ ++ L++
Sbjct: 164 PGAVPPERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALARLK--KDDPDVHLLI 221
Query: 519 GNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFIN 578
D + A +L +LI + L +V + H D+P Y LA + ++
Sbjct: 222 V--GDAQGRRFYYAELL----ELIKRLGLQDRVTFVGHCS--DMPAAYALAD----IVVS 269
Query: 579 PAL-VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVS 637
+ E FG T +EA A G P++A+ +GG + R GLLV P D +A+A AL +++S
Sbjct: 270 ASTEPEAFGRTAVEAQAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILS 329
Query: 638 E 638
Sbjct: 330 L 330
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355 |
| >gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA | Back alignment and domain information |
|---|
Score = 57.2 bits (139), Expect = 2e-08
Identities = 38/179 (21%), Positives = 77/179 (43%), Gaps = 23/179 (12%)
Query: 473 RFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNA 532
+ + +++ +S P K + +++ F +++ L++ G+
Sbjct: 192 KLGAPEDEKVLIHISNFRPVKRVEDVIEVFAR---VQQEVPAKLLL----------VGDG 238
Query: 533 SVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEA 592
+L+ + L +V + KQ DV E+ ++ +F+ P+ E FGL +EA
Sbjct: 239 PERSPAEQLVRELGLTDRVLFLG--KQDDVAELLSIS----DLFLLPSEKESFGLAALEA 292
Query: 593 AAHGLPMVATKNGG-P-VDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNG 649
A G+P++A+ GG P V H G L D D + +A+ + L+ ++ L
Sbjct: 293 MACGVPVIASNAGGIPEVVEHGV--TGFLCDVGDVETMAEYAISLLEDEELLQRFSAAA 349
|
Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374 |
| >gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 4e-08
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 28/172 (16%)
Query: 480 KPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVL 539
P IL + R KK LL+AF L +I G+ + + + L L
Sbjct: 188 PPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVII-GDGPLLAALEA-----LARAL 241
Query: 540 KLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEP------FGLTLIEAA 593
L + G A P E+ L + + +F+ P++ P + L+EA
Sbjct: 242 GLGGRVTFLG--AQPH-------AEVRELMRRAR-IFLQPSVTAPSGDAEGLPVVLLEAQ 291
Query: 594 AHGLPMVATKNGGPVDIHRAL---NNGLLVDPHDQQAIADALLKLVSEKNLW 642
A G+P+VAT++GG I A+ GLLV D A+A AL +L+++ +L
Sbjct: 292 ASGVPVVATRHGG---IPEAVEDGETGLLVPEGDVAALAAALGRLLADPDLR 340
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367 |
| >gnl|CDD|222237 pfam13579, Glyco_trans_4_4, Glycosyl transferase 4-like domain | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 6e-08
Identities = 51/240 (21%), Positives = 80/240 (33%), Gaps = 82/240 (34%)
Query: 191 GGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGES 250
GG +YV+ELARALA + V + + + E E+DG+ V
Sbjct: 1 GGAERYVLELARALAAR--GHEVTVVTPR--------GPPGRPE-----LEEDGVRV--- 42
Query: 251 SGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIH 310
R+P R L + ++L + P V+H
Sbjct: 43 -----HRLPVPRRPSLPG--------------DLRALRRLRRLLRRE-------RPDVVH 76
Query: 311 GHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGE 370
H AG A L + VP+V+T H L + L + ++ R + E
Sbjct: 77 AHGPLAGLLARLAARRRGVPVVVTPHGLALRQGSGLKR-------------RLARAL--E 121
Query: 371 ELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPG 430
L A+ V+ ++ E + LRA R+VV+P G
Sbjct: 122 RRLLRRADAVVAVSEAEAEL---------------LRALGVPA--------ARVVVVPNG 158
|
Length = 158 |
| >gnl|CDD|99984 cd03813, GT1_like_3, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 7e-08
Identities = 45/212 (21%), Positives = 86/212 (40%), Gaps = 30/212 (14%)
Query: 465 PAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDD 523
P ++ R P++ + R P K+I T ++A R +++ + ++G D+
Sbjct: 278 PERFAPARRARPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVR--KKIPDAEGWVIGPTDE 335
Query: 524 IEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVE 583
E + +L++ L V + Q +V E V + ++ E
Sbjct: 336 DPEYAE-------ECRELVESLGLEDNVKF--TGFQ-NVKEYLPKL----DVLVLTSISE 381
Query: 584 PFGLTLIEAAAHGLPMVATKNGG---------PVDIHRALNNGLLVDPHDQQAIADALLK 634
L ++EA A G+P+VAT G + A G +V P D +A+A A+L+
Sbjct: 382 GQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPA---GEVVPPADPEALARAILR 438
Query: 635 LVSEKNLWVECRKNGWKNIH-LFSWPEHCRTY 665
L+ + L + G K + ++ +Y
Sbjct: 439 LLKDPELRRAMGEAGRKRVERYYTLERMIDSY 470
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 475 |
| >gnl|CDD|234448 TIGR04047, MSMEG_0565_glyc, glycosyltransferase, MSMEG_0565 family | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 1e-07
Identities = 47/163 (28%), Positives = 71/163 (43%), Gaps = 20/163 (12%)
Query: 481 PMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMG-----NRDDIEEMSSGNASVL 535
P +LA+ +P+KN LL+AF R R A L + G E + A +
Sbjct: 194 PYVLAVGGIEPRKNTIDLLEAFALLRARRPQAQLVIAGGATLFDYDAYRREFEARAAELG 253
Query: 536 ITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAH 595
+ ++ + G V D+P +YR A F P+L E FGL ++EA A
Sbjct: 254 LDPGAVV----ITGPVP------DADLPALYRCAD----AFAFPSLKEGFGLVVLEALAS 299
Query: 596 GLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSE 638
G+P+VA + P + + DP D +IADAL +
Sbjct: 300 GIPVVA-SDIAPFTEYLGRFDAAWADPSDPDSIADALALALDP 341
|
A conserved gene cluster found sporadically from Actinobacteria to Proteobacteria to Cyanobacteria features a radical SAM protein, an N-acetyltransferase, an oxidoreductase, and two additional proteins whose functional classes are unclear. The metabolic role of the cluster is probably biosynthetic. This glycosyltransferase, named from member MSMEG_0565 from Mycobacterium smegmatis, occurs in most but not all instances of the cluster [Unknown function, Enzymes of unknown specificity]. Length = 373 |
| >gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Score = 53.3 bits (128), Expect = 4e-07
Identities = 56/226 (24%), Positives = 92/226 (40%), Gaps = 26/226 (11%)
Query: 443 PEVDGELTSLI-GGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKA 501
P++D E +I G D K + R+ + +P IL + R +K + LL A
Sbjct: 164 PDLDPEKVHVIYNGIDTKEYKPDDG-NVVLDRYGIDRSRPYILFVGRITRQKGVPHLLDA 222
Query: 502 FGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYD--LYGQVAYPKHHKQ 559
+ + + L G D E V V + + D G + K +
Sbjct: 223 V---HYIPKDVQVVLCAGAPDTPE--------VAEEVRQAVALLDRNRTGIIWINKMLPK 271
Query: 560 YDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLL 619
++ E+ A VF+ P++ EP G+ +EA A G P+VA+ GG ++ G L
Sbjct: 272 EELVELLSNAE----VFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFL 327
Query: 620 VDPHD------QQAIADALLKLVSEKNLWVECRKNGWKN-IHLFSW 658
V P + Q +A A+ L+++ L + G K FSW
Sbjct: 328 VPPDNSDADGFQAELAKAINILLADPELAKKMGIAGRKRAEEEFSW 373
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388 |
| >gnl|CDD|109900 pfam00862, Sucrose_synth, Sucrose synthase | Back alignment and domain information |
|---|
Score = 52.6 bits (126), Expect = 9e-07
Identities = 55/235 (23%), Positives = 98/235 (41%), Gaps = 43/235 (18%)
Query: 168 IVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALAR----------MPGVYRVDLFS 217
+V++S HG N+ LG DTGGQ+ Y+++ RAL + R+ + +
Sbjct: 275 VVILSPHGYFAQANV-LGY-PDTGGQVVYILDQVRALESEMLVRIKQQGLDITPRILIVT 332
Query: 218 RQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKEL----LW 273
R + V + + E + G + +I+R+PF LRK + +W
Sbjct: 333 RLLPDA-VGTTCNQRLEKVFG-----------TEHTHILRVPFRTEKGILRKWISRFEVW 380
Query: 274 PYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVL 333
PY++ F + + +I P +I G+Y+D A+LL+ L V
Sbjct: 381 PYLETFAED-----------VASEIAAELQAKPDLIIGNYSDGNLVASLLAHKLGVTQCT 429
Query: 334 TGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEI 388
H+L + K + Y + + ++++ A+ +ITST QEI
Sbjct: 430 IAHALEKTK----YPDSDIYWKKFEKKYHFSCQFTADLIAMNHADFIITSTFQEI 480
|
Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. Length = 550 |
| >gnl|CDD|99976 cd03804, GT1_wbaZ_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 51.8 bits (125), Expect = 1e-06
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 564 EIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPH 623
E+ L A+ + F+ PA E FG+ +EA A G P++A GG ++ G+L +
Sbjct: 254 ELRDLYARARA-FLFPA-EEDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQ 311
Query: 624 DQQAIADALLKLVSEKNLW-VECRKNGWKNIHLFSWP 659
+++A A+ + ++ R + + FS
Sbjct: 312 TVESLAAAVERFEKNEDFDPQAIRAHAER----FSES 344
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. Length = 351 |
| >gnl|CDD|99970 cd03796, GT1_PIG-A_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 4e-06
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 32/120 (26%)
Query: 521 RDDIEEMSSGNASVLITVLKLIDKYDLYGQV---AYPKHHKQYDVPEIYRLAAKTKG-VF 576
R +EEM +KY+L +V H V ++ +G +F
Sbjct: 236 RILLEEM--------------REKYNLQDRVELLGAVPHE---RVRDVLV-----QGHIF 273
Query: 577 INPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGL--LVDPHDQQAIADALLK 634
+N +L E F + ++EAA+ GL +V+T+ GG I L + L +P D ++I L +
Sbjct: 274 LNTSLTEAFCIAIVEAASCGLLVVSTRVGG---IPEVLPPDMILLAEP-DVESIVRKLEE 329
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. Length = 398 |
| >gnl|CDD|99977 cd03805, GT1_ALG2_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 48.7 bits (117), Expect = 1e-05
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 22/187 (11%)
Query: 480 KPMILALSRPDPKKNITTLLKAFGECRP-LRELANLTLIM-GNRDD-IEEMSSGNASVLI 536
K L+++R + KKNI ++AF + L E N+ L++ G D + E N L
Sbjct: 211 KKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAE----NVEYLE 266
Query: 537 TVLKLIDKY-DLYGQVAY----PKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIE 591
+ +L ++ L QV + K+ L + + + P+ E FG+ +E
Sbjct: 267 ELQRLAEELLLLEDQVIFLPSISDSQKEL-------LLSSARALLYTPSN-EHFGIVPLE 318
Query: 592 AAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWK 651
A G P++A +GGP++ G L +P + A+A+LKL ++ +L G K
Sbjct: 319 AMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDPDLADRMGAAGRK 377
Query: 652 NIH-LFS 657
+ FS
Sbjct: 378 RVKEKFS 384
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. Length = 392 |
| >gnl|CDD|130549 TIGR01485, SPP_plant-cyano, sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 2e-05
Identities = 42/183 (22%), Positives = 68/183 (37%), Gaps = 29/183 (15%)
Query: 844 DALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENS 903
D + S G E+YY G PD +A ++ +W D +
Sbjct: 64 DIWVTSVGSEIYYGGAEV-------PDQHWAEYLSEKWQRDIVVA------------ITD 104
Query: 904 KNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIV 963
K Q D H +S+ + + I L + L+ GL +Y + + I+
Sbjct: 105 KFEELKPQPD-LEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIY-SSGKDLDIL 162
Query: 964 PLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGV-VEKGSEE 1022
P + + QAL+YL + + + V G+SG+ I GV V EE
Sbjct: 163 PQGSGKGQALQYLLQKLAMEPSQTLVC-GDSGNDIELFEIGSVR------GVIVSNAQEE 215
Query: 1023 LLR 1025
LL+
Sbjct: 216 LLQ 218
|
This model describes the sucrose phosphate phosphohydrolase from plants and cyanobacteria (SPP). SPP is a member of the Class IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. This model is limited to plants and cyanobacteria. However, a closely related group of sequences from bacteria and archaea (TIGR*****) may prove to catalyze the same reaction. If so, the SPP-subfamily model (TIGR01482) containing both of these groups should be promoted to equivalog and the two smaller models retired. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. Length = 249 |
| >gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 2e-05
Identities = 47/224 (20%), Positives = 86/224 (38%), Gaps = 50/224 (22%)
Query: 468 WSDVMRFLTNPHKPMILALSRPDPKKNIT------------TLLKAFGECRPLRELANLT 515
D+ F P + D K + TLL+A L++ ++
Sbjct: 196 GVDLELFKPPPADESLRKELGLDDKFVVLYAGNIGRAQGLDTLLEAA---ALLKDRPDIR 252
Query: 516 -LIMGN---RDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAK 571
LI+G+ +++++E++ +D G+V ++PE+ A
Sbjct: 253 FLIVGDGPEKEELKELAK---------ALGLDNVTFLGRVPKE------ELPELLAAAD- 296
Query: 572 TKGVFINPALVEP-FGLT----LIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQ 626
V + P P F L E A G P++A+ +G ++ GL+V P D +
Sbjct: 297 ---VGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPE 353
Query: 627 AIADALLKLVSEKNLWVECRKNG----WKNIHLFSWPEHCRTYL 666
A+A A+L+L+ + E +NG + FS + L
Sbjct: 354 ALAAAILELLDDPEERAEMGENGRRYVEEK---FSREKLAERLL 394
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394 |
| >gnl|CDD|99983 cd03812, GT1_CapH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 4e-05
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 25/127 (19%)
Query: 488 RPDPKKNITTLLKAFGECRPLRELANLTLIMGN---RDDIEEMSSGNASVLITVLKLIDK 544
R +KN L++ F E A L L+ G+ ++I++ L L DK
Sbjct: 200 RFSEQKNHEFLIEIFAELLKKNPNAKLLLV-GDGELEEEIKKKVKE--------LGLEDK 250
Query: 545 YDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKN 604
G DVPE+ + VF+ P+L E L LIEA A GLP + +
Sbjct: 251 VIFLGVRN--------DVPELLQAM----DVFLFPSLYEGLPLVLIEAQASGLPCILSDT 298
Query: 605 GGP-VDI 610
VD+
Sbjct: 299 ITKEVDL 305
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). Length = 358 |
| >gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 8e-05
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 583 EPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQ--QAIADA 631
EPFGL +IEA A G P++A + G ++ G LVD ++ A+A A
Sbjct: 255 EPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDSVEELAAAVARA 305
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335 |
| >gnl|CDD|185325 PRK15427, PRK15427, colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 1e-04
Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 27/173 (15%)
Query: 472 MRFLTNPHKPM-ILALSRPDPKKNITTLLKAFGECRPLRE--LANLTLIMGNRDDIEEMS 528
R + P P+ I++++R KK + ++A CR L+E +A I+G +
Sbjct: 213 PRPVKAPATPLEIISVARLTEKKGLHVAIEA---CRQLKEQGVAFRYRILGIGPWERRLR 269
Query: 529 SGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPAL------V 582
+ LI++Y L V P ++V + A VF+ P++ +
Sbjct: 270 T-----------LIEQYQLEDVVEMPGFKPSHEVKAMLDDA----DVFLLPSVTGADGDM 314
Query: 583 EPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKL 635
E + L+EA A G+P+V+T + G ++ A +G LV +D QA+A L
Sbjct: 315 EGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAF 367
|
Length = 406 |
| >gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 1e-04
Identities = 34/161 (21%), Positives = 56/161 (34%), Gaps = 30/161 (18%)
Query: 479 HKPMILALSRPDPKKNITTLLK-AFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLIT 537
I + LL+ A R L +I +++
Sbjct: 1 GIVFIGGFGHAPNWDGLLWLLEEALPLLRKALPDVELHIIGSGPEELA------------ 48
Query: 538 VLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALV-EPFGLTLIEAAAHG 596
+L G V D+ + A V + P L L+EA A G
Sbjct: 49 --RLAPNVHFLGFVE--------DLAALLASAD----VALAPLRFGAGSPLKLLEALAAG 94
Query: 597 LPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVS 637
LP+VAT + G + L G+LV D + A+A+++L++
Sbjct: 95 LPVVAT-DIGAEGLPEDLGWGVLV-ADDPEEFAEAIVRLLA 133
|
Length = 134 |
| >gnl|CDD|99966 cd03792, GT1_Trehalose_phosphorylase, Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 3e-04
Identities = 59/234 (25%), Positives = 97/234 (41%), Gaps = 44/234 (18%)
Query: 422 PRMVVIPPGMD-FSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHK 480
PR V+IPP +D S + EL SP I I + ++ +P +
Sbjct: 153 PRKVIIPPSIDPLS---------GKNREL----------SPADIEYI---LEKYGIDPER 190
Query: 481 PMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGN--RDDIEEMSSGNASVLITV 538
P I +SR DP K+ ++ A+ + + L +++G+ DD E V V
Sbjct: 191 PYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQL-VLVGSGATDDPE-----GWIVYEEV 244
Query: 539 LKL--IDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHG 596
L+ D D++ P + + + R + V + ++ E FGLT+ EA G
Sbjct: 245 LEYAEGDP-DIHVLTLPPVSDLEVNA--LQRAST----VVLQKSIREGFGLTVTEALWKG 297
Query: 597 LPMVATKNGG-PVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNG 649
P++A GG P+ I G LVD + A +L L+ + L + N
Sbjct: 298 KPVIAGPVGGIPLQIEDGE-TGFLVDTVE--EAAVRILYLLRDPELRRKMGANA 348
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. Length = 372 |
| >gnl|CDD|234452 TIGR04063, stp3, PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 5e-04
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 581 LVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRAL----NNGLLVDPHDQQAIADALLKLV 636
LV P L +EA A G + A+ GG HR L G+L D A+A ALL L+
Sbjct: 305 LVTP--LKPLEAMAQGRLVAASDVGG----HRELIRDGETGVLFPAGDPAALAAALLALL 358
Query: 637 SEKNLWVECRKNG 649
+ W E R
Sbjct: 359 DNRAQWPELRAAA 371
|
PEP-CTERM/exosortase is a protein-sorting system associated with exopolysaccharide production. Members of this protein family are group 1 glycosyltransferases (see pfam00534) in which the overwhelming majority occur in species with the EpsH1 form of exosortase (see TIGR03109), and usually co-clustered with the exosortase. A typical member is Daro_2409 from Dechloromonas aromatica RCB. Length = 397 |
| >gnl|CDD|99965 cd03791, GT1_Glycogen_synthase_DULL1_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 43.3 bits (103), Expect = 6e-04
Identities = 23/101 (22%), Positives = 43/101 (42%), Gaps = 11/101 (10%)
Query: 575 VFINPALVEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRALN--NGLLVDPHDQQAI 628
F+ P+ EP GLT + A +G + GG +D + G + + ++ A+
Sbjct: 373 FFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADAL 432
Query: 629 ADALLKLVS---EKNLWVECRKNGWKNIHLFSWPEHCRTYL 666
AL + ++ + W + ++N FSW + YL
Sbjct: 433 LAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYL 471
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. Length = 476 |
| >gnl|CDD|234487 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG-Bacteroidales peptide system | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.004
Identities = 44/188 (23%), Positives = 75/188 (39%), Gaps = 35/188 (18%)
Query: 474 FLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIM---GNRDDIEEMSSG 530
+ + +IL + R D K + L++AF L++ N L++ G+ +
Sbjct: 221 LGFSEDEKIILFVGRLDEIKGVDYLIEAFK--IVLKKDPNCRLVIVGDGDYSRYLQECKK 278
Query: 531 NASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLI 590
S IT +DK LY E+Y++A V + P+ E I
Sbjct: 279 IWS-KITFTGKLDKEKLY---------------ELYQIA----DVGVLPSFHEQCSYVAI 318
Query: 591 EAAAHGLPMVATKNGGPVDIHRALNNGLL---------VDPHDQQAIADALLKLVSEKNL 641
E HGLP++ T + G ++ NG V+ D++ + LLKL+S +
Sbjct: 319 EMMMHGLPLIGTTSTGLSEMIEDGLNGYKIPIKEYRDYVEL-DKKELVQKLLKLLSSSDE 377
Query: 642 WVECRKNG 649
+ KN
Sbjct: 378 AKQMGKNA 385
|
Members of this protein family are predicted glycosyltransferases that occur in conserved gene neighborhoods in various members of the Bacteroidales. These neighborhoods feature a radical SAM enzyme predicted to act in peptide modification (family TIGR04148), peptides from family TIGR04149 with a characteristic GG cleavage motif, and several other proteins. Length = 406 |
| >gnl|CDD|185381 PRK15484, PRK15484, lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.004
Identities = 39/171 (22%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 478 PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNAS--- 533
P + ++L R P K I L++AF + NL L ++G D S G +
Sbjct: 191 PDETVLLYAGRISPDKGILLLMQAFEKLATAHS--NLKLVVVG---DPTASSKGEKAAYQ 245
Query: 534 --VLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIE 591
VL ++ D+ + G K H Y + ++ V + + E F + +E
Sbjct: 246 KKVLEAAKRIGDRCIMLGGQPPEKMHNYYPLADL---------VVVPSQVEEAFCMVAVE 296
Query: 592 AAAHGLPMVATKNGGPVDIHRALNNGL-LVDPHDQQAIADALLKLVSEKNL 641
A A G P++A+ GG + G L +P +I + + +++ L
Sbjct: 297 AMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPEL 347
|
Length = 380 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1067 | |||
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 100.0 | |
| PLN00142 | 815 | sucrose synthase | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 100.0 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 100.0 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 100.0 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 100.0 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 100.0 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 100.0 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 100.0 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 100.0 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 100.0 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 100.0 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 100.0 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 100.0 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 100.0 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 100.0 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 100.0 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 100.0 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 100.0 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 100.0 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 100.0 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 100.0 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 100.0 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 100.0 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 100.0 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 100.0 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 100.0 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 100.0 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 100.0 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.98 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.98 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.98 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.97 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.97 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.97 | |
| PF00862 | 550 | Sucrose_synth: Sucrose synthase; InterPro: IPR0003 | 99.97 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 99.97 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.97 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.97 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.97 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.97 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.97 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.97 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.97 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.97 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.96 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.96 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.96 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.96 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.96 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.96 | |
| PLN02887 | 580 | hydrolase family protein | 99.96 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.96 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.96 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.96 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.95 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.95 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.95 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.95 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.95 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.94 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.94 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.94 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.94 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.94 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.93 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.93 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.93 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.92 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 99.91 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 99.9 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.89 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 99.89 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.88 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.88 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 99.87 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 99.87 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 99.87 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 99.87 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.86 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.86 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 99.85 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.84 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.84 | |
| PLN02423 | 245 | phosphomannomutase | 99.8 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 99.8 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.77 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.76 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.76 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.76 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 99.73 | |
| PLN02580 | 384 | trehalose-phosphatase | 99.73 | |
| PLN03017 | 366 | trehalose-phosphatase | 99.72 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.72 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.71 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.71 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.68 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.66 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.65 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.63 | |
| PLN02151 | 354 | trehalose-phosphatase | 99.63 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 99.58 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.56 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 99.55 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 99.53 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.42 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 99.33 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.31 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.31 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.31 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 99.27 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 99.24 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.22 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 99.11 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 99.05 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 98.96 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 98.94 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 98.84 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.84 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.82 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.81 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 98.79 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.78 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.73 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 98.66 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 98.65 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 98.57 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 98.54 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.5 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.49 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 98.39 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 98.35 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.3 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 98.28 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 98.27 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.14 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 98.09 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.06 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 98.05 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 98.0 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 97.99 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 97.95 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 97.95 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 97.94 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 97.86 | |
| PLN02208 | 442 | glycosyltransferase family protein | 97.82 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 97.78 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 97.71 | |
| PF03332 | 220 | PMM: Eukaryotic phosphomannomutase; InterPro: IPR0 | 97.66 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 97.64 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.63 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 97.61 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 97.55 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 97.48 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 97.46 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 97.46 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 97.41 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 97.37 | |
| PLN00414 | 446 | glycosyltransferase family protein | 97.32 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 97.32 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 97.3 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 97.21 | |
| PF11997 | 268 | DUF3492: Domain of unknown function (DUF3492); Int | 97.2 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 97.15 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 97.14 | |
| PLN02764 | 453 | glycosyltransferase family protein | 97.12 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 97.11 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 97.1 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 97.01 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 96.98 | |
| PF08550 | 29 | DUF1752: Fungal protein of unknown function (DUF17 | 96.89 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 96.87 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 96.81 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 96.78 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 96.78 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 96.75 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 96.7 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 96.7 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 96.68 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 96.67 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.56 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 96.43 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 96.42 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 96.41 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 96.4 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 96.37 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 96.35 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 96.32 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 96.31 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 96.31 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 96.28 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 96.26 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 96.25 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 96.23 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 96.15 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 96.08 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 96.07 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 96.05 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 96.03 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 96.01 | |
| PF08288 | 90 | PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP | 95.97 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.95 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 95.9 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 95.77 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 95.68 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 95.67 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 95.43 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 95.35 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 95.22 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 95.22 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 95.2 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 95.14 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 95.11 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 94.99 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 94.91 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 94.91 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 94.82 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 94.24 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 94.23 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 94.21 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 94.19 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 94.19 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 94.12 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 93.97 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 93.89 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 93.81 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 93.7 | |
| PF12038 | 168 | DUF3524: Domain of unknown function (DUF3524); Int | 93.56 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 93.54 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 93.44 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 93.33 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 93.2 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 92.66 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 92.54 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 92.53 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 92.48 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 92.4 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 92.38 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 92.38 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 92.24 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 92.18 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 92.15 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 92.02 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 91.81 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 91.8 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 91.53 | |
| COG4370 | 412 | Uncharacterized protein conserved in bacteria [Fun | 91.34 | |
| PF11440 | 355 | AGT: DNA alpha-glucosyltransferase; InterPro: IPR0 | 91.28 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 91.26 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 91.22 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 90.9 | |
| PRK08238 | 479 | hypothetical protein; Validated | 90.78 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 90.76 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 90.67 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 90.33 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 90.2 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 90.08 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 89.86 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 89.45 | |
| PF06437 | 408 | ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0 | 89.16 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 88.81 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 88.53 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 88.49 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 88.11 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 87.88 | |
| PLN02940 | 382 | riboflavin kinase | 87.77 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 87.55 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 87.53 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 86.14 | |
| PRK06769 | 173 | hypothetical protein; Validated | 86.09 | |
| PF10933 | 364 | DUF2827: Protein of unknown function (DUF2827); In | 85.6 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 85.08 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 84.88 | |
| PF03033 | 139 | Glyco_transf_28: Glycosyltransferase family 28 N-t | 84.81 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 84.81 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 84.78 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 84.63 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 83.36 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 82.93 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 82.92 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 82.36 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 82.2 | |
| PLN02954 | 224 | phosphoserine phosphatase | 81.64 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 81.21 | |
| PF04413 | 186 | Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid | 80.08 |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-206 Score=1866.88 Aligned_cols=1039 Identities=67% Similarity=1.112 Sum_probs=927.1
Q ss_pred CCCCchhhhHHHHHHhcCCchhhhhhcccCcccccCCCCCCchhhHhhhhcccCcchhhHHHHHHHHhcchhhhhhhhhh
Q 001492 1 MAGNEWINGYLEAILDSGASAIEEQQKQAPVNLADRGHFNPTKYFVEEVVTSVDETDLYRTWIKVVATRNTRERSSRLEN 80 (1067)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (1067)
||||||||||||||||+|+|+++++++ +.+++||+|+||||||||||||||||||||||||+||+||||||||||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (1050)
T TIGR02468 1 MAGNDWINSYLEAILDVGPGLDDAKSS-ALLLLRERGRFSPTRYFVEEVITGFDETDLHRTWVKAVATRSPQERNTRLEN 79 (1050)
T ss_pred CCcchHHHHHHHHHHhcCCCccccccc-ccccccccCccCCceeeEEeecccccchhhhhHHHHHHhhcChhhhhhhhhh
Confidence 999999999999999999999988862 2478999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHhhhhhhhhcHHHHHHHHHHHHhhhhchhhhhhhhhcccCCCcCCCcccccCCC-CC--cccccccccc--ccc
Q 001492 81 MCWRIWHLTRKKKQLEWEELQRLANRRLEREQGRRDVTEDMSEDLSEGEKGDGVGEIQTP-DT--PRKKFQRNFS--NLE 155 (1067)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~--~~~ 155 (1067)
||||||||||||||||||+|||+|+||+||||||||||+|||||||||||+|.++++++| ++ +++|++|++| .|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (1050)
T TIGR02468 80 MCWRIWNLARKKKQLEWEEAQRLAKRRLERERGRREATADMSEDLSEGEKGDVAGDISVAGGEPSTKGRLPRISSNLEME 159 (1050)
T ss_pred hHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhHhhcCCcccCcccccccccCCCccccccccccccchhh
Confidence 999999999999999999999999999999999999999999999999999999999998 33 5799999999 689
Q ss_pred ccccccCCCceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccc
Q 001492 156 VWSDDKKEKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEM 235 (1067)
Q Consensus 156 ~~~~~~~~~~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~ 235 (1067)
.|+++++.++|||+|||+||+|||+||++||++|+|||.+||++||++|+++||||+|+|+||++.+|.++|+|++|.|+
T Consensus 160 ~~~~~~~~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~ 239 (1050)
T TIGR02468 160 TWSDQQKEKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEM 239 (1050)
T ss_pred cchhhcccCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999989999999999999
Q ss_pred cCCCCCC-CCccccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCC
Q 001492 236 LTGGPED-DGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYA 314 (1067)
Q Consensus 236 l~~~~~~-~~~~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~ 314 (1067)
+++...+ ...++.+++|++|+|+||||.++|++|+.+|||+..|++.++.++.++.+.|++|++.+++.+|||||+|||
T Consensus 240 ~~~~~~~~~~~~~~~~~g~rIvRip~GP~~~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw 319 (1050)
T TIGR02468 240 LTPRSSENDGDEMGESSGAYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYA 319 (1050)
T ss_pred ccccccccccccccCCCCeEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcc
Confidence 9876555 667788899999999999999779999999999999999999999999999999998877778999999999
Q ss_pred chhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhh
Q 001492 315 DAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGL 394 (1067)
Q Consensus 315 ~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~ 394 (1067)
+++++++.+++.+|+|+|+|+|++++.++.+++.+|..+...++..|++.+|+.+|+.++..||.|||+|++++++||.+
T Consensus 320 ~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~l 399 (1050)
T TIGR02468 320 DAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGL 399 (1050)
T ss_pred hHHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHH
Confidence 99999999999999999999999999999989899987778888999999999999999999999999999999999999
Q ss_pred cCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhh
Q 001492 395 YDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRF 474 (1067)
Q Consensus 395 y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (1067)
|++|+|.++++|++|+++||+|||++++|+.|||||||++.|.|.... ....... .......+.+++|..+++|
T Consensus 400 Y~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~--~~~~~~~----~~~~~~~~~~~~~~~l~r~ 473 (1050)
T TIGR02468 400 YDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGD--MDGETEG----NEEHPAKPDPPIWSEIMRF 473 (1050)
T ss_pred hccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCcc--ccchhcc----cccccccccchhhHHHHhh
Confidence 999999999999999999999999999999999999999999986521 1111000 0001234567788899999
Q ss_pred ccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeC
Q 001492 475 LTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYP 554 (1067)
Q Consensus 475 ~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~ 554 (1067)
+..+++|+|+++||+++.||+..||+||..++.+...+++.+|+|++++.+++......+..++..+++++++.++|.|+
T Consensus 474 ~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~Fl 553 (1050)
T TIGR02468 474 FTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYP 553 (1050)
T ss_pred cccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEEEEEecCchhhhhhccchHHHHHHHHHHHHhCCCCeEEec
Confidence 99999999999999999999999999999997655667888889999888887777778889999999999999999999
Q ss_pred CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHH
Q 001492 555 KHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLK 634 (1067)
Q Consensus 555 g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ 634 (1067)
|++++++++.+|+.|+.+.||||+||++||||++++||||||+|||+|+.||+.|++.++.+|++|+|.|+++||++|.+
T Consensus 554 G~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~ 633 (1050)
T TIGR02468 554 KHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLK 633 (1050)
T ss_pred CCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHH
Confidence 99999999999999977778999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhcCCCCCCCCcc-hhhhhhhcccccchhhhhhhccccccCC
Q 001492 635 LVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRMRHPQWQTDTPV-DEMAAEESSFNDSLKDVQDMSLRLSVDG 713 (1067)
Q Consensus 635 ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~sl~d~~~~~~~~~~~~ 713 (1067)
++++++++++|++++++.+++|+|+.++++|++.|..+..++|+|++..+. .+.++ ++++.++++|++||||+||+||
T Consensus 634 LL~Dpelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~ 712 (1050)
T TIGR02468 634 LVADKQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEASE-DESPGDSLRDIQDISLNLSVDG 712 (1050)
T ss_pred HhhCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccCccccccccccccccc-ccCccccccccccchhhccccc
Confidence 999999999999999999989999999999999999999999998864322 22222 5788999999999999999999
Q ss_pred CCCCCCCCCcccccCCCCchhhHHHHHHhhccCCCCCCcchHHHHhhh--hcccccCcccccCCeEEEEEEeCCCCCCCC
Q 001492 714 DKSSLNGSLDYTAASSGDPVQDQVKRVLSKIKKPDSDSNDKEAEKKLL--ENVVSKYPMLRRRRRLIVIALDCYDSKGAP 791 (1067)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~r~klllia~DiDGTLl~~ 791 (1067)
|+...+...+.....+..++..++.+++.+++++.. ++.++. .++.+|||++++|+++++||+|||.|++
T Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~via~D~d~~~~-- 784 (1050)
T TIGR02468 713 DKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPK------GSSAKAQQGSGAGKYPALRRRKRLFVIAVDCYDDKD-- 784 (1050)
T ss_pred cccccccccccccccchhhHHHHHHHHHhhcccccc------ccccccccccccccCccccccceEEEEEeccCCCCC--
Confidence 976654332221122333445566666666655432 223333 3667999999999999999999999933
Q ss_pred chhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecCCCcccCCcCCCCh
Q 001492 792 DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDP 871 (1067)
Q Consensus 792 ~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~~~~~~~~~~~~d~ 871 (1067)
..+.++++++++++....+++ +|+|+|||++.++.+++.+.++++.+||++||+.|++|||++....++..+.+|.
T Consensus 785 ---~~~~l~~~~~~~~~~~~~~~i-gfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~ 860 (1050)
T TIGR02468 785 ---LLQIIKNIFEAVRKERMEGSS-GFILSTSMTISEIQSFLKSGGLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQ 860 (1050)
T ss_pred ---hHHHHHHHHHHHhccccCCce-EEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCcceeccCcCCCCCCCceECH
Confidence 446777778888743223779 9999999999999999999999755899999999999999843322345788999
Q ss_pred hhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCCchHHHHHHHHHHHhcCCcEEE
Q 001492 872 DYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDLRQKLRMRGLRCHP 951 (1067)
Q Consensus 872 ~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~el~~~L~~~~~~~~v 951 (1067)
.|..||.++|.++.+++++.++++...+++.+. ...+..++...++.||++|++.++...+.+++|++.|++++++|++
T Consensus 861 ~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~-~~~l~~Q~~~~q~~~k~SY~v~d~~~~~~v~elr~~Lr~~gLr~~~ 939 (1050)
T TIGR02468 861 DYHSHIEYRWGGEGLRKTLVKWAASINEKKGEN-EEQIVEEDEESSTDHCYAFKVKDPSKVPPVKELRKLLRIQGLRCHA 939 (1050)
T ss_pred HHHHHHHccCCcHHHHHHHHHHhhhcccccccc-cccceecChhhCCCceEEEEecCcccCccHHHHHHHHHhCCCceEE
Confidence 999999999999999999999998765544321 1345666778899999999988888888899999999999999999
Q ss_pred EEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCcccchhhhhcccC--c
Q 001492 952 MYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTTN--L 1029 (1067)
Q Consensus 952 ~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~~~~~~~~a~~--~ 1029 (1067)
++|+++.+|||+|.++|||+||+||+.+|||++++|+||+||++||||++||.+.+++|+|++.++.+++ ++|+++ +
T Consensus 940 iys~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~g~~~~~s~-~l~~~~sY~ 1018 (1050)
T TIGR02468 940 VYCRNGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKGVVSRGSE-QLHANRSYP 1018 (1050)
T ss_pred EeecCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEecccccchh-hhcccCCCc
Confidence 9999866999999999999999999999999999999999999999999999999999999999988875 566888 9
Q ss_pred CCCCCCCCCCCceeecCcccHHHHHHHHHhhc
Q 001492 1030 RDDIVPSESPLIAHVNANAKVDEIANALRQVG 1061 (1067)
Q Consensus 1030 ~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g 1061 (1067)
++||||++||||.+++++|..++|..||++||
T Consensus 1019 ~eDVvp~dspni~~~~~~~~~~di~~aL~~l~ 1050 (1050)
T TIGR02468 1019 LDDVVPLDSPNIVQATGGSSSDDISDALKKLS 1050 (1050)
T ss_pred ccccccCCCCCeEeecCCCCHHHHHHHHHhcC
Confidence 99999999999999999999999999999986
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-57 Score=547.90 Aligned_cols=458 Identities=29% Similarity=0.513 Sum_probs=355.3
Q ss_pred CCceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHH--------HcCCCee----EEEEEecCCCCCCCCCcCC
Q 001492 163 EKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARAL--------ARMPGVY----RVDLFSRQVSSPEVDWSYG 230 (1067)
Q Consensus 163 ~~~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aL--------a~~G~v~----~V~v~t~~~~~~~~~~~y~ 230 (1067)
+|.|||+|||.||+++++| .+|+ ||+||+..||.+||++| +++| | +|+|+||.+.+.. ...|.
T Consensus 253 p~~~rIa~lS~Hg~~~~~~-~lG~-~DtGGq~vYV~elaraL~~~~~~~La~~G--~~v~~~V~I~TR~~~~~~-~~~~~ 327 (784)
T TIGR02470 253 PMVFNVVILSPHGYFGQEN-VLGL-PDTGGQVVYILDQVRALENEMLQRIKLQG--LEITPKILIVTRLIPDAE-GTTCN 327 (784)
T ss_pred CccceEEEEecccccCCcc-ccCC-CCCCCceeHHHHHHHHHHHHHHHHHHhcC--CCccceEEEEecCCCCcc-ccccc
Confidence 6789999999999999888 4997 79999999999999985 6888 8 8889999875432 33455
Q ss_pred CcccccCCCCCCCCccccccCCeEEEeccCCCCc-----cCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCC
Q 001492 231 EPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRD-----KYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVW 305 (1067)
Q Consensus 231 ~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~-----~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~ 305 (1067)
++.|. +...++++|+|+|++|.. +|++|+.+|||+..|.+.+..++.+- .+.+
T Consensus 328 ~~~e~-----------~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~-----------~~~~ 385 (784)
T TIGR02470 328 QRLEK-----------VYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAE-----------LQGK 385 (784)
T ss_pred ccccc-----------ccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-----------cCCC
Confidence 55433 334579999999999852 57999999999999999888766431 1246
Q ss_pred ceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCH
Q 001492 306 PYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTK 385 (1067)
Q Consensus 306 pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~ 385 (1067)
||+||+|||+++++|..+++.+|+|+|+|.|+++..++. ..|. .+...+..|++..++.+|..++..||.|||+|.
T Consensus 386 pDlIHahy~d~glva~lla~~lgVP~v~t~HsL~~~K~~---~~g~-~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~ 461 (784)
T TIGR02470 386 PDLIIGNYSDGNLVASLLARKLGVTQCTIAHALEKTKYP---DSDI-YWQEFEDKYHFSCQFTADLIAMNAADFIITSTY 461 (784)
T ss_pred CCEEEECCCchHHHHHHHHHhcCCCEEEECCcchhhccc---cccc-ccccchhHHHhhhhhhHHHHHHhcCCEEEECcH
Confidence 999999999999999999999999999999999776632 2232 344456788889999999999999999999999
Q ss_pred HHHH------HHHhhcCCCch-HHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCc----cccccccccC
Q 001492 386 QEID------EQWGLYDGFDV-KLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPE----VDGELTSLIG 454 (1067)
Q Consensus 386 ~~~~------~~~~~y~~~~~-~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~----~~~~~~~~~~ 454 (1067)
+++. .||+.|..|.. .+ +++..|+ +.+.+|+.|||||+|...|.|...... ....++.++
T Consensus 462 qEi~~~~~~v~qY~s~~~ft~p~L-----y~vvnGi---d~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll- 532 (784)
T TIGR02470 462 QEIAGTKDSVGQYESHQAFTMPGL-----YRVVHGI---DVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELL- 532 (784)
T ss_pred HHhhhhhhhhhhhhhcccccccce-----eeeecCc---cCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhc-
Confidence 8866 35555554432 11 0122232 346679999999999999987652110 001111111
Q ss_pred CCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCC-hhhhhccchH
Q 001492 455 GTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDD-IEEMSSGNAS 533 (1067)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~-~~~l~~~~~~ 533 (1067)
..+........+...+++|+|+++||+++.||++.|++||.+++.++...+++ |+|++.+ ......+...
T Consensus 533 --------~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LV-IVGGg~~~~~s~d~ee~~ 603 (784)
T TIGR02470 533 --------FSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLV-VVAGKLDAKESKDREEQA 603 (784)
T ss_pred --------cchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEE-EEeCCcccccccchhHHH
Confidence 00111112223344678999999999999999999999999876555444553 5555432 1111122234
Q ss_pred HHHHHHHHHHhcCCCCcEEeCCCC-CCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhc
Q 001492 534 VLITVLKLIDKYDLYGQVAYPKHH-KQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHR 612 (1067)
Q Consensus 534 ~~~~i~~l~~~~~l~~~V~~~g~~-~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~ 612 (1067)
...++..+++++++.++|.|+|.. +..++.++|+.++.++||||+||++|+||+|++||||||+|||+|+.||+.|+|.
T Consensus 604 ~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~ 683 (784)
T TIGR02470 604 EIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQ 683 (784)
T ss_pred HHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhc
Confidence 677889999999999999999975 6778999998654445899999999999999999999999999999999999999
Q ss_pred cCCceEEeCCCCHHHHHHHHHHhh----cCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHH
Q 001492 613 ALNNGLLVDPHDQQAIADALLKLV----SEKNLWVECRKNGWKNI-HLFSWPEHCRTYLTRV 669 (1067)
Q Consensus 613 ~~~~Gllv~p~d~~~la~aL~~ll----~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~ 669 (1067)
++.+|++|+|.|+++++++|.+++ +||+.|++++++|++++ ++|||+.++++++++.
T Consensus 684 dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 684 DGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred CCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999999999999999876 69999999999999998 6999999999999876
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-56 Score=535.84 Aligned_cols=462 Identities=27% Similarity=0.471 Sum_probs=348.4
Q ss_pred CCceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHH--------HHHHcCCCeeEE----EEEecCCCCCCCCCcCC
Q 001492 163 EKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELA--------RALARMPGVYRV----DLFSRQVSSPEVDWSYG 230 (1067)
Q Consensus 163 ~~~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA--------~aLa~~G~v~~V----~v~t~~~~~~~~~~~y~ 230 (1067)
+|-|||++||.||++++.+ ++|+ ||||||..||.+|| ++|+++| |+| +|+||.+.+.. ...|.
T Consensus 277 p~~~~i~~iS~Hg~~~~~~-~lG~-~DtGGQ~vYVl~~aral~~el~~~l~~~G--~~v~~~v~i~TR~i~~~~-~~~~~ 351 (815)
T PLN00142 277 PMVFNVVIFSPHGYFGQAN-VLGL-PDTGGQVVYILDQVRALENEMLLRIKQQG--LDIKPQILIVTRLIPDAK-GTTCN 351 (815)
T ss_pred hHhHhhheecccccccccc-cCCC-CCCCCceehHHHHHHHHHHHHHHHHHhcC--CCccceeEEEEeccCCcc-CCccc
Confidence 5668999999999999999 5998 99999999998777 5666788 866 59999886554 45566
Q ss_pred CcccccCCCCCCCCccccccCCeEEEeccCCCCc----cCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCc
Q 001492 231 EPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRD----KYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWP 306 (1067)
Q Consensus 231 ~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~----~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~p 306 (1067)
++.|.. ...++++|+|+||+|.. +|++|+.+|||+..|.+.+..++.+. ...+|
T Consensus 352 ~~~e~v-----------~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~~~~-----------~~~~P 409 (815)
T PLN00142 352 QRLEKV-----------SGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEILAE-----------LQGKP 409 (815)
T ss_pred Ccceec-----------cCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHHHHh-----------cCCCC
Confidence 655544 33569999999999952 57799999999999999888776541 12469
Q ss_pred eEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHH
Q 001492 307 YVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQ 386 (1067)
Q Consensus 307 DvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~ 386 (1067)
|+||+|||+++++|..+++.+|+|+|+|.|+++..++. . +...+.+....|++..|+.+|..++..||.||++|.+
T Consensus 410 DlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~---~-~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT~q 485 (815)
T PLN00142 410 DLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYP---D-SDIYWKKFDDKYHFSCQFTADLIAMNHADFIITSTYQ 485 (815)
T ss_pred CEEEECCccHHHHHHHHHHHhCCCEEEEcccchhhhcc---c-cCCcccccchhhhhhhchHHHHHHHHhhhHHHhCcHH
Confidence 99999999999999999999999999999999887752 2 2235556778899999999999999999999999999
Q ss_pred HHH------HHHhhcCCCc-hHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCC
Q 001492 387 EID------EQWGLYDGFD-VKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGS 459 (1067)
Q Consensus 387 ~~~------~~~~~y~~~~-~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~ 459 (1067)
++. .||..|..|. |.+ +|+-.|+ +.+.+++.|||||+|...|.|.... ...+..+..+++.
T Consensus 486 Ei~g~~~~i~qy~sh~~f~~p~L-----~rvv~GI---d~~~~ki~VVppGvD~~~F~P~~~~---~~rl~~l~n~I~~- 553 (815)
T PLN00142 486 EIAGSKDTVGQYESHTAFTLPGL-----YRVVHGI---DVFDPKFNIVSPGADMSIYFPYTEK---QKRLTSLHPSIEE- 553 (815)
T ss_pred HHhcccchhhhhhcccccccchh-----hhhhccc---cccccCeeEECCCCChhhcCCCChH---HhhHHhhcccchh-
Confidence 986 3455544332 322 2333444 3356699999999999998865421 0111111100000
Q ss_pred CCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecC-CChhhhhccchHHHHHH
Q 001492 460 SPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNR-DDIEEMSSGNASVLITV 538 (1067)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~-~~~~~l~~~~~~~~~~i 538 (1067)
..-.+........+...+++|+|+++||+++.||++.|++|++.+.+++...++ +|+|++ +.......+......++
T Consensus 554 -~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~L-VIVGgg~d~~~s~d~ee~~el~~L 631 (815)
T PLN00142 554 -LLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNL-VVVGGFIDPSKSKDREEIAEIKKM 631 (815)
T ss_pred -hcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEE-EEEECCccccccccHHHHHHHHHH
Confidence 000111111222233456788999999999999999999999988644333333 366665 21111111112345678
Q ss_pred HHHHHhcCCCCcEEeCCCCC-CCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCce
Q 001492 539 LKLIDKYDLYGQVAYPKHHK-QYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNG 617 (1067)
Q Consensus 539 ~~l~~~~~l~~~V~~~g~~~-~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~G 617 (1067)
..+++++++.++|.|.|.+. ..+..++|+..+.+.|+||+||++|+||++++||||||+|||+|+.||+.|+|.++.+|
T Consensus 632 ~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG 711 (815)
T PLN00142 632 HSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSG 711 (815)
T ss_pred HHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcE
Confidence 89999999999999998654 33444555422212299999999999999999999999999999999999999999999
Q ss_pred EEeCCCCHHHHHHHHHHh----hcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHH
Q 001492 618 LLVDPHDQQAIADALLKL----VSEKNLWVECRKNGWKNI-HLFSWPEHCRTYLTRV 669 (1067)
Q Consensus 618 llv~p~d~~~la~aL~~l----l~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~ 669 (1067)
++|+|+|+++++++|.++ ++|++.|++++++|++++ ++|||+.++++++++.
T Consensus 712 ~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 712 FHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred EEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999999998765 479999999999999998 6999999999999876
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-53 Score=504.22 Aligned_cols=438 Identities=53% Similarity=0.884 Sum_probs=344.8
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCc
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGI 245 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1067)
+||++||.||+++++++.+|++|+.||+++|+.+|+++|+++|++|+|+|+|+....+.+...|+.+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~~~~~----------- 69 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYAQPIE----------- 69 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccCCCee-----------
Confidence 589999999999999999999999999999999999999999933399999986433322223332221
Q ss_pred cccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHh
Q 001492 246 EVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSG 325 (1067)
Q Consensus 246 ~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~ 325 (1067)
...+|+.++|+|+++. .+..+..+|+++..|...+...+.+ ...+|||||+|++.++.++.++++
T Consensus 70 --~~~~gv~v~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~------------~~~~~DvIH~h~~~~~~~~~~~~~ 134 (439)
T TIGR02472 70 --RIAPGARIVRLPFGPR-RYLRKELLWPYLDELADNLLQHLRQ------------QGHLPDLIHAHYADAGYVGARLSR 134 (439)
T ss_pred --EeCCCcEEEEecCCCC-CCcChhhhhhhHHHHHHHHHHHHHH------------cCCCCCEEEEcchhHHHHHHHHHH
Confidence 1236999999998776 5666667788877666655554432 013599999999888888888999
Q ss_pred cCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHH
Q 001492 326 ALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKV 405 (1067)
Q Consensus 326 ~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~ 405 (1067)
..++|+|+|.|+++......+...+. ....+...|++..++..|+.+++.+|.||++|..++.+.+..+.++++
T Consensus 135 ~~~~p~V~t~H~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~----- 208 (439)
T TIGR02472 135 LLGVPLIFTGHSLGREKRRRLLAAGL-KPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQP----- 208 (439)
T ss_pred HhCCCEEEecccccchhhhhcccCCC-ChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHHHHHhccCCCc-----
Confidence 99999999999875543322222222 222333445556666678889999999999998776665544433333
Q ss_pred HHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEE
Q 001492 406 LRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILA 485 (1067)
Q Consensus 406 l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~ 485 (1067)
.++.+||||+|.+.|.+..... ........++++...+++++|++
T Consensus 209 ----------------~ki~vIpnGvd~~~f~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~i~~ 253 (439)
T TIGR02472 209 ----------------ERMQVIPPGVDLSRFYPPQSSE-------------------ETSEIDNLLAPFLKDPEKPPILA 253 (439)
T ss_pred ----------------cceEEECCCcChhhcCCCCccc-------------------cchhHHHHHHhhccccCCcEEEE
Confidence 3899999999999987653100 00111223344445667889999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHH
Q 001492 486 LSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEI 565 (1067)
Q Consensus 486 vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~l 565 (1067)
+||+.+.||++.|++||..+..+...+++.+|+|++++.+.+.....++..++..+++++++.++|.|+|+++.++++.+
T Consensus 254 vGrl~~~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~ 333 (439)
T TIGR02472 254 ISRPDRRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPEL 333 (439)
T ss_pred EcCCcccCCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHH
Confidence 99999999999999999876433445667677898877666655445567778889999999999999999999999999
Q ss_pred HHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHH
Q 001492 566 YRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVEC 645 (1067)
Q Consensus 566 y~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~ 645 (1067)
|+.|+...|+||+||..|+||++++||||||+|||+|+.||+.|++.++.+|++|+|.|+++++++|.++++++++++++
T Consensus 334 ~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~ 413 (439)
T TIGR02472 334 YRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSDSSQWQLW 413 (439)
T ss_pred HHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHH
Confidence 99875555899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-HcCCHHHHHHHHHHHHH
Q 001492 646 RKNGWKNI-HLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 646 ~~~~~~~~-~~fsw~~~a~~~l~~~~ 670 (1067)
++++++.+ ++|||+.++++|+++++
T Consensus 414 ~~~a~~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 414 SRNGIEGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 99999998 59999999999998863
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-50 Score=501.17 Aligned_cols=591 Identities=15% Similarity=0.170 Sum_probs=401.4
Q ss_pred ccccccchhHHHH----------HHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc-CCCcEEEEeC
Q 001492 268 RKELLWPYIQEFV----------DGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA-LNVPMVLTGH 336 (1067)
Q Consensus 268 ~k~~l~~~l~~f~----------~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~-~giP~V~t~H 336 (1067)
.+..+||.+..+. ......-..++.++.+.+.. -|+|..|+.-...++..+.++ ...++-+..|
T Consensus 91 ~n~~lWp~~H~~~~~~~~~~~~w~~Y~~vN~~fA~~~~~~~~~-----~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH 165 (726)
T PRK14501 91 CNSTLWPLFHYFPEYTEFEDRFWESYERVNQRFAEAIAAIARP-----GDVVWVHDYQLMLLPAMLRERLPDARIGFFLH 165 (726)
T ss_pred hhccccchhcccCcccCcCHHHHHHHHHHHHHHHHHHHHhcCC-----CCEEEEeCchhhhHHHHHHhhCCCCcEEEEee
Confidence 3556777654321 22223334456666665432 489999987666666666554 3578999999
Q ss_pred CCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHH-hcCcc
Q 001492 337 SLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARA-RRGVN 415 (1067)
Q Consensus 337 ~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~-~~Gv~ 415 (1067)
-.++..- -+ .. ++ ..-.+ -..+-.+|.|-..+......+.... .+.|+... ..++.
T Consensus 166 ~pfP~~~-~f-~~--lp-----~~~~l-------l~~ll~~Dligf~t~~~~r~Fl~~~-------~~~l~~~~~~~~~~ 222 (726)
T PRK14501 166 IPFPSFE-VF-RL--LP-----WREEI-------LEGLLGADLIGFHTYDYVRHFLSSV-------LRVLGYETELGEIR 222 (726)
T ss_pred CCCCChH-HH-hh--CC-----ChHHH-------HHHHhcCCeEEeCCHHHHHHHHHHH-------HHHcCCccCCCeEE
Confidence 8866441 11 00 01 01112 2346789999999998887765532 22222111 12344
Q ss_pred cCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCH
Q 001492 416 CHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNI 495 (1067)
Q Consensus 416 ~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi 495 (1067)
..|+.. ++.++|+|||++.|.+....+++....+. ++. ..+++++|+++||+++.||+
T Consensus 223 ~~gr~~-~v~v~p~GID~~~f~~~~~~~~~~~~~~~-------------------lr~--~~~~~~~il~VgRl~~~Kgi 280 (726)
T PRK14501 223 LGGRIV-RVDAFPMGIDYDKFHNSAQDPEVQEEIRR-------------------LRQ--DLRGRKIILSIDRLDYTKGI 280 (726)
T ss_pred ECCEEE-EEEEEECeEcHHHHHHHhcCchHHHHHHH-------------------HHH--HcCCCEEEEEecCcccccCH
Confidence 445543 79999999999999865422222111111 111 13567899999999999999
Q ss_pred HHHHHHHHhcccccCCCc----EEE-EEe--cC---CChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHH
Q 001492 496 TTLLKAFGECRPLRELAN----LTL-IMG--NR---DDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEI 565 (1067)
Q Consensus 496 ~~ll~A~~~l~~l~~~~~----l~l-IvG--~~---~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~l 565 (1067)
..+++||+.+. +..|+ +.+ ++| .+ +++++++....+..++|+...+..++.+.++|.+++++++++++
T Consensus 281 ~~~l~A~~~ll--~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~l 358 (726)
T PRK14501 281 PRRLLAFERFL--EKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVAL 358 (726)
T ss_pred HHHHHHHHHHH--HhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHH
Confidence 99999999984 45554 333 444 22 44566666666667777777777778788889999999999999
Q ss_pred HHHhhcCCcEEEecCCCCCCCHHHHHHHHc-----CCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCH-
Q 001492 566 YRLAAKTKGVFINPALVEPFGLTLIEAAAH-----GLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEK- 639 (1067)
Q Consensus 566 y~~A~~~~dV~v~ps~~EgfgltllEAmA~-----G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~- 639 (1067)
|+.| ||||+||++|||||+++||||| |+||+++..|++.+++ .|++|+|+|++++|++|.++++++
T Consensus 359 y~~a----Dv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~----~~llv~P~d~~~la~ai~~~l~~~~ 430 (726)
T PRK14501 359 YRAA----DVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA----EALLVNPNDIEGIAAAIKRALEMPE 430 (726)
T ss_pred HHhc----cEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHhC----cCeEECCCCHHHHHHHHHHHHcCCH
Confidence 9999 9999999999999999999999 6689999999999884 499999999999999999999975
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhcCCCCCCCCcchhhhhhhcccccchhhhhhhccccccCCCCCCCC
Q 001492 640 NLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMSLRLSVDGDKSSLN 719 (1067)
Q Consensus 640 ~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~d~~~~~~~~~~~~~~~~~~ 719 (1067)
+.+.+..+++++.+..|||..|+++|++.|+++...+....... +
T Consensus 431 ~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~~~~~~~~~---------------------~-------------- 475 (726)
T PRK14501 431 EEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKAFASKP---------------------I-------------- 475 (726)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhcccccc---------------------C--------------
Confidence 44555556788888899999999999999998865432111000 0
Q ss_pred CCCcccccCCCCchhhHHHHHHhhccCCCCCCcchHHHHhhhhcccccCcccccCCeEEEEEEeCCCCCCCC-----chh
Q 001492 720 GSLDYTAASSGDPVQDQVKRVLSKIKKPDSDSNDKEAEKKLLENVVSKYPMLRRRRRLIVIALDCYDSKGAP-----DKK 794 (1067)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~klllia~DiDGTLl~~-----~~~ 794 (1067)
+....+.++.+|+++++ |++++ |+||||++. ...
T Consensus 476 -------------~~~~~~~~~~~y~~~~~--------------------------rLi~~--D~DGTL~~~~~~~~~~~ 514 (726)
T PRK14501 476 -------------TPAAAEEIIARYRAASR--------------------------RLLLL--DYDGTLVPFAPDPELAV 514 (726)
T ss_pred -------------CccCHHHHHHHHHhccc--------------------------eEEEE--ecCccccCCCCCcccCC
Confidence 01335667788876655 65555 999997752 245
Q ss_pred hHHHHHHHHHHHHhc-CCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecCCCcccCCcCCCChhh
Q 001492 795 MIQIMYDVFKAVRLD-HQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDY 873 (1067)
Q Consensus 795 i~~~~~~al~~l~~~-g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~~~~~~~~~~~~d~~~ 873 (1067)
+++.++++|++|.++ | + .|+|+|||++..+.+++..+++ ++|++||++++.+++.-. . ....+..|
T Consensus 515 ~~~~~~~~L~~L~~d~g----~-~V~ivSGR~~~~l~~~~~~~~l------~liaenG~~i~~~~~~w~-~-~~~~~~~w 581 (726)
T PRK14501 515 PDKELRDLLRRLAADPN----T-DVAIISGRDRDTLERWFGDLPI------HLVAEHGAWSRAPGGEWQ-L-LEPVATEW 581 (726)
T ss_pred CCHHHHHHHHHHHcCCC----C-eEEEEeCCCHHHHHHHhCCCCe------EEEEeCCEEEeCCCCceE-E-CCCcchhH
Confidence 789999999999995 4 6 7999999999999999987543 699999999986532111 0 00112334
Q ss_pred hhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCCch---HHHHHHHHHHHhc--CCc
Q 001492 874 ASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKA---RRIDDLRQKLRMR--GLR 948 (1067)
Q Consensus 874 ~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~---~~~~el~~~L~~~--~~~ 948 (1067)
...+ ...+..+..+.++++.+.+ ..+++|++...+.. ...+++.+.+... ...
T Consensus 582 ~~~v-----~~il~~~~~~~~gs~ie~k-----------------~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~ 639 (726)
T PRK14501 582 KDAV-----RPILEEFVDRTPGSFIEEK-----------------EASLAWHYRNADPELGEARANELILALSSLLSNAP 639 (726)
T ss_pred HHHH-----HHHHHHHHhcCCCcEEEEc-----------------ceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3322 1122222223333332221 35677877554311 1133455555432 223
Q ss_pred EEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCC---ceEEEeCCCcccchhhhhc
Q 001492 949 CHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGA---HKTLIMKGVVEKGSEELLR 1025 (1067)
Q Consensus 949 ~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~a---g~gVaMgNA~e~~~~~~~~ 1025 (1067)
+.++ +++ .++||+|+++|||.|+++|++ +++++.+++ |||+.| | ++||+.+ +++|+|||+...
T Consensus 640 ~~v~-~g~-~~veV~p~~vnKG~al~~ll~--~~~~d~vl~-~GD~~n-D-e~Mf~~~~~~~~~v~vG~~~s~------- 705 (726)
T PRK14501 640 LEVL-RGN-KVVEVRPAGVNKGRAVRRLLE--AGPYDFVLA-IGDDTT-D-EDMFRALPETAITVKVGPGESR------- 705 (726)
T ss_pred eEEE-ECC-eEEEEEECCCCHHHHHHHHHh--cCCCCEEEE-ECCCCC-h-HHHHHhcccCceEEEECCCCCc-------
Confidence 4433 344 599999999999999999999 777888888 999999 9 9999986 799999997621
Q ss_pred ccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhh
Q 001492 1026 TTNLRDDIVPSESPLIAHVNANAKVDEIANALRQV 1060 (1067)
Q Consensus 1026 a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~ 1060 (1067)
+.|...++ +++...|+.+
T Consensus 706 ---------------A~~~l~~~--~eV~~~L~~l 723 (726)
T PRK14501 706 ---------------ARYRLPSQ--REVRELLRRL 723 (726)
T ss_pred ---------------ceEeCCCH--HHHHHHHHHH
Confidence 22665544 6688888775
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-46 Score=462.66 Aligned_cols=549 Identities=13% Similarity=0.117 Sum_probs=384.3
Q ss_pred HHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc-CCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhH
Q 001492 289 NMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA-LNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRI 367 (1067)
Q Consensus 289 ~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~-~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri 367 (1067)
.++.++.+.+.. -|+|-.|..-...+..++.+. ...++.+..|..++..- -+.. ++. .-.+
T Consensus 136 ~FA~~i~~~~~~-----~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs~e-~fr~---lp~-----r~~i---- 197 (797)
T PLN03063 136 MFLDVVKENYEE-----GDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSE-IYKT---LPS-----RSEL---- 197 (797)
T ss_pred HHHHHHHHhcCC-----CCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCCHH-HHhh---CCC-----HHHH----
Confidence 445555554431 379999987555566666554 46899999998876541 1100 010 1112
Q ss_pred HHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHH-HhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccc
Q 001492 368 EGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRAR-ARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVD 446 (1067)
Q Consensus 368 ~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~-~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~ 446 (1067)
-..+-.||.|-+.|...+..+.... .+.|+.. ...++...|+.. ++.+||+|||++.|.+....+++.
T Consensus 198 ---l~gll~aDligF~t~~y~r~Fl~~~-------~r~l~~~~~~~~i~~~gr~~-~I~viP~GID~~~f~~~~~~~~~~ 266 (797)
T PLN03063 198 ---LRAVLTADLIGFHTYDFARHFLSAC-------TRILGVEGTHEGVVDQGKVT-RVAVFPIGIDPERFINTCELPEVK 266 (797)
T ss_pred ---HHHHhcCCEEEeCCHHHHHHHHHHH-------HHHhCccccCCceEECCeEE-EEEEEecccCHHHHHHHhcChhHH
Confidence 2346789999999999888876532 1222211 123455445544 899999999999887654222211
Q ss_pred cccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc----EEEE-E---
Q 001492 447 GELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELAN----LTLI-M--- 518 (1067)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~lI-v--- 518 (1067)
... ..++.. .+++++|+++||+++.||+..+++||+.+. ..+|+ ++|+ +
T Consensus 267 ~~~-------------------~~lr~~--~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL--~~~P~~~~kvvLvqia~p 323 (797)
T PLN03063 267 QHM-------------------KELKRF--FAGRKVILGVDRLDMIKGIPQKYLAFEKFL--EENPEWRDKVMLVQIAVP 323 (797)
T ss_pred HHH-------------------HHHHHh--cCCCeEEEEecccccccCHHHHHHHHHHHH--HhCccccCcEEEEEEecC
Confidence 111 111111 246789999999999999999999999984 45554 3333 2
Q ss_pred --ecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcC
Q 001492 519 --GNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHG 596 (1067)
Q Consensus 519 --G~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G 596 (1067)
|+++.+++++....+...+|+..++..++.+.+++.++++.+++.++|+.| ||||+||++|||||+++||||||
T Consensus 324 sr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~A----DvfvvtSlrEGmnLv~lEamA~g 399 (797)
T PLN03063 324 TRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAIT----DVMLVTSLRDGMNLVSYEFVACQ 399 (797)
T ss_pred CCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhC----CEEEeCccccccCcchhhHheee
Confidence 233456666665566656666666667788888888899999999999999 99999999999999999999999
Q ss_pred CC----EEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhc-CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 001492 597 LP----MVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVS-EKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAA 671 (1067)
Q Consensus 597 ~P----VVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~-d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~ 671 (1067)
+| +|+|..+|..+.+ +.+|++|+|+|++++|++|.++|+ +++++++..+..++++..|+|..|++.|++.|.+
T Consensus 400 ~p~~gvlVlSe~~G~~~~l--~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~ 477 (797)
T PLN03063 400 KAKKGVLVLSEFAGAGQSL--GAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELND 477 (797)
T ss_pred cCCCCCEEeeCCcCchhhh--cCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHH
Confidence 98 9999888887775 457999999999999999999999 6677778888888889999999999999999988
Q ss_pred hHhcCCCCCCCCcchhhhhhhcccccchhhhhhhccccccCCCCCCCCCCCcccccCCCCchhhHHHHHHhhccCCCCCC
Q 001492 672 CRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMSLRLSVDGDKSSLNGSLDYTAASSGDPVQDQVKRVLSKIKKPDSDS 751 (1067)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~sl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (1067)
+...+....... + .....+.++.+|+++++
T Consensus 478 ~~~~~~~~~~~~---------------------~---------------------------~~l~~~~~~~~y~~a~~-- 507 (797)
T PLN03063 478 IIVEAELRTRNI---------------------P---------------------------LELPEQDVIQQYSKSNN-- 507 (797)
T ss_pred HhhhhhhcccCC---------------------C---------------------------CCCCHHHHHHHHHhccC--
Confidence 765432111000 0 01334567888887665
Q ss_pred cchHHHHhhhhcccccCcccccCCeEEEEEEeCCCCCCCC--------chhhHHHHHHHHHHHHhcCCCCceeEEEEECC
Q 001492 752 NDKEAEKKLLENVVSKYPMLRRRRRLIVIALDCYDSKGAP--------DKKMIQIMYDVFKAVRLDHQTARVTGFALSTA 823 (1067)
Q Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~r~klllia~DiDGTLl~~--------~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTG 823 (1067)
+++|+ |+||||... +..+++.+.++|++|.++. + . .|+|+||
T Consensus 508 ------------------------rll~L--DyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d~--~-~-~V~IvSG 557 (797)
T PLN03063 508 ------------------------RLLIL--GFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDP--K-T-TVVVLSR 557 (797)
T ss_pred ------------------------eEEEE--ecCccccCCCCCccccccCCCCHHHHHHHHHHHcCC--C-C-EEEEEeC
Confidence 76666 999996532 1237789999999999884 3 4 5999999
Q ss_pred CCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecCCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCC
Q 001492 824 MPVSETIEFLNSMKIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENS 903 (1067)
Q Consensus 824 R~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~ 903 (1067)
|+...+..++...++ ++++++|+++..+++.-........+..|...+ ...++.+..++++++.+.|
T Consensus 558 R~~~~L~~~~~~~~l------~l~aeHG~~~r~~~~~w~~~~~~~~~~~w~~~v-----~~~l~~~~~rtpGs~iE~K-- 624 (797)
T PLN03063 558 SGKDILDKNFGEYNI------WLAAENGMFLRHTSGEWVTTMPEHMNLDWVDGV-----KNVFKYFTDRTPRSYVEKS-- 624 (797)
T ss_pred CCHHHHHHHhCCCCC------cEEEeCCEEEecCCCceeeccccccChhHHHHH-----HHHHHHHHHhCCCcEEEEc--
Confidence 999999999987554 599999998764421100000011234565554 3567778888999888877
Q ss_pred CCCCCCcccccccCCceEEEEEecCCCch---HHHHHHHHHHHhc---CCcEEEEEeeCCeeEEEecCCCCHHHHHHHHH
Q 001492 904 KNSSSPIQEDQKSSNAHCISYLIKDPSKA---RRIDDLRQKLRMR---GLRCHPMYCRNSTRMQIVPLLASRSQALRYLF 977 (1067)
Q Consensus 904 ~~~~~~~~~~~~~~~~~ki~~~~~~~~~~---~~~~el~~~L~~~---~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~ 977 (1067)
.+.++||++..+.. ....++.+.+... ...+.++ .+...+||.|.++|||.|++.|+
T Consensus 625 ---------------~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~--~Gk~vvEvrp~gvnKG~Av~~ll 687 (797)
T PLN03063 625 ---------------ETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVV--RGQKSVEVHAIGVTKGAAIGRIL 687 (797)
T ss_pred ---------------CeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEE--ECCeEEEEEcCCCChHHHHHHHH
Confidence 56889999765321 3455666665221 2234443 34459999999999999999999
Q ss_pred HHh------CCCcccEEEEecCC-CCCChhhhhcCCce
Q 001492 978 VRW------RLNVANMFVILGES-GDTDYEELISGAHK 1008 (1067)
Q Consensus 978 ~~~------gi~~e~vva~fGDs-~N~D~~eML~~ag~ 1008 (1067)
+++ +-+.+ ++.++||. ++ | ++||+..+-
T Consensus 688 ~~~~~~~~~~~~~d-fvl~~Gdd~~~-D-EdmF~~l~~ 722 (797)
T PLN03063 688 GEIVHNKSMTTPID-FVFCSGYFLEK-D-EDVYTFFEP 722 (797)
T ss_pred HHhhhccccCCCCC-EEEEeCCCCCC-c-HHHHHhccc
Confidence 986 22334 45449998 46 9 999997753
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-44 Score=440.97 Aligned_cols=547 Identities=14% Similarity=0.149 Sum_probs=392.0
Q ss_pred HHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc-CCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhH
Q 001492 289 NMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA-LNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRI 367 (1067)
Q Consensus 289 ~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~-~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri 367 (1067)
.++.++.+.+.. -|+|-+|..-...+..++.+. ...++-|.+|..++.. +.+ +.+-.-
T Consensus 220 ~FA~~i~~~~~~-----gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~-Eif---------------r~LP~r 278 (934)
T PLN03064 220 MFADVVNEHYEE-----GDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSS-EIH---------------RTLPSR 278 (934)
T ss_pred HHHHHHHHhcCC-----CCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCCCh-HHH---------------hhCCcH
Confidence 355555554431 379999987656666666554 4578999999876644 111 111111
Q ss_pred HHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHH-HhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccc
Q 001492 368 EGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRAR-ARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVD 446 (1067)
Q Consensus 368 ~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~-~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~ 446 (1067)
+.--..+-.||.|-+.|..++..+.... .+.|+.. ...||...|+.. ++.++|.|||++.|......+++.
T Consensus 279 ~elL~glL~aDlIGFqT~~y~rhFl~~c-------~rlLg~~~~~~~v~~~Gr~v-~V~~~PiGID~~~f~~~~~~~~v~ 350 (934)
T PLN03064 279 SELLRSVLAADLVGFHTYDYARHFVSAC-------TRILGLEGTPEGVEDQGRLT-RVAAFPIGIDSDRFIRALETPQVQ 350 (934)
T ss_pred HHHHHHHhcCCeEEeCCHHHHHHHHHHH-------HHHhCccccCCeEEECCEEE-EEEEEeCEEcHHHHHHHhcChhHH
Confidence 1112346789999999999888876532 2333322 123566666655 799999999999998665333333
Q ss_pred cccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcE----EEE---Ee
Q 001492 447 GELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANL----TLI---MG 519 (1067)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l----~lI---vG 519 (1067)
..++.+ ..++ .++++|++++|+|+.|||...++||+.+ |..+|.+ +|| ++
T Consensus 351 ~~~~~l------------------r~~~---~g~kiIlgVDRLD~~KGI~~kL~AfE~f--L~~~Pe~r~kVVLvQIa~p 407 (934)
T PLN03064 351 QHIKEL------------------KERF---AGRKVMLGVDRLDMIKGIPQKILAFEKF--LEENPEWRDKVVLLQIAVP 407 (934)
T ss_pred HHHHHH------------------HHHh---CCceEEEEeeccccccCHHHHHHHHHHH--HHhCccccCCEEEEEEcCC
Confidence 332221 1222 4678999999999999999999999998 4555653 222 23
Q ss_pred ---cCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc-
Q 001492 520 ---NRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAH- 595 (1067)
Q Consensus 520 ---~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~- 595 (1067)
+.+++++++.+..+.+.+|+..+...++.+.+++...++++++.++|+.| ||||+||++|||||+++|||||
T Consensus 408 sr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~A----DV~lvTslrDGmNLva~Eyva~~ 483 (934)
T PLN03064 408 TRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVT----DVALVTSLRDGMNLVSYEFVACQ 483 (934)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhC----CEEEeCccccccCchHHHHHHhh
Confidence 44568888888899999999999999999989899999999999999999 9999999999999999999999
Q ss_pred ----CCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhc-CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 001492 596 ----GLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVS-EKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 596 ----G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~-d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~ 670 (1067)
|++||+...|+..++ +..|++|||+|++++|++|.++|+ +++++++..+..++.+..|||..|++.|++.+.
T Consensus 484 ~~~~GvLILSEfaGaa~~L---~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~ 560 (934)
T PLN03064 484 DSKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSELN 560 (934)
T ss_pred cCCCCCeEEeCCCchHHHh---CCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHH
Confidence 788886666666555 346999999999999999999999 677888888888899999999999999999888
Q ss_pred HhHhcCCCCCCCCcchhhhhhhcccccchhhhhhhccccccCCCCCCCCCCCcccccCCCCchhhHHHHHHhhccCCCCC
Q 001492 671 ACRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMSLRLSVDGDKSSLNGSLDYTAASSGDPVQDQVKRVLSKIKKPDSD 750 (1067)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (1067)
.+...+....... ......+.++.+|+++.+
T Consensus 561 ~~~~~~~~~~~~~------------------------------------------------~~~l~~~~~~~~y~~a~~- 591 (934)
T PLN03064 561 DTVVEAQLRTRQV------------------------------------------------PPQLPPEDAIQRYLQSNN- 591 (934)
T ss_pred HHHhhhhcccccc------------------------------------------------CCCCCHHHHHHHHHhccc-
Confidence 7754321110000 002345667888887665
Q ss_pred CcchHHHHhhhhcccccCcccccCCeEEEEEEeCCCCCCC----Cc----------hhhHHHHHHHHHHHHhcCCCCcee
Q 001492 751 SNDKEAEKKLLENVVSKYPMLRRRRRLIVIALDCYDSKGA----PD----------KKMIQIMYDVFKAVRLDHQTARVT 816 (1067)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~~~~~r~klllia~DiDGTLl~----~~----------~~i~~~~~~al~~l~~~g~~g~i~ 816 (1067)
+++|+ |.||||.. |+ ..+++.++++|++|.++. +.
T Consensus 592 -------------------------RLlfL--DyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~dp---~n- 640 (934)
T PLN03064 592 -------------------------RLLIL--GFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDP---KT- 640 (934)
T ss_pred -------------------------eEEEE--ecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhCC---CC-
Confidence 76666 99999653 22 236688999999999884 34
Q ss_pred EEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecCCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhc
Q 001492 817 GFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNT 896 (1067)
Q Consensus 817 ~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~ 896 (1067)
.|+|+|||+...+..+|..+++ ++++++|+++..+++.-........+..|...+ ...++.+..+++++
T Consensus 641 ~VaIVSGR~~~~Le~~fg~~~L------~LaAEHG~~~R~~~~~w~~~~~~~~~~~W~~~v-----~~ile~~~eRtPGS 709 (934)
T PLN03064 641 TIVVLSGSDRSVLDENFGEFDM------WLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSV-----KHVFEYFTERTPRS 709 (934)
T ss_pred eEEEEeCCCHHHHHHHhCCCCc------eEEeeCCeEEecCCCcceeccccccchHHHHHH-----HHHHHHHHhcCCCc
Confidence 6999999999999999988655 699999999765431100000111234566555 35577788889998
Q ss_pred ccCCCCCCCCCCCcccccccCCceEEEEEecCCC---chHHHHHHHHHHHhc---CCcEEEEEeeCCeeEEEecCCCCHH
Q 001492 897 TEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPS---KARRIDDLRQKLRMR---GLRCHPMYCRNSTRMQIVPLLASRS 970 (1067)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~---~~~~~~el~~~L~~~---~~~~~v~~s~~~~~lEI~p~gasKg 970 (1067)
+.+.| .+.++||++..+ ......++.+.+... ...+.++ .+..++||.|.++|||
T Consensus 710 ~IE~K-----------------~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~--~Gk~VVEVrP~gvnKG 770 (934)
T PLN03064 710 HFETR-----------------ETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVV--QGSRSVEVRPVGVTKG 770 (934)
T ss_pred EEEEc-----------------CcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEE--eCCeEEEEEcCCCCHH
Confidence 88877 468889987653 122355666666321 2234443 3445999999999999
Q ss_pred HHHHHHHHHhC------CCcccEEEEecCCCCCChhhhhcCC
Q 001492 971 QALRYLFVRWR------LNVANMFVILGESGDTDYEELISGA 1006 (1067)
Q Consensus 971 ~AL~~L~~~~g------i~~e~vva~fGDs~N~D~~eML~~a 1006 (1067)
.|++.|+.++. -++ ++|.++||+..|| ++||+..
T Consensus 771 ~Av~~ll~~~~~~~~~~~~~-DFvlc~GDd~~~D-EdmF~~l 810 (934)
T PLN03064 771 AAIDRILGEIVHSKSMTTPI-DYVLCIGHFLGKD-EDIYTFF 810 (934)
T ss_pred HHHHHHHHhhhhccccCCCC-CEEEEeCCCCCCc-HHHHHHH
Confidence 99999999762 123 4555599987569 9999965
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-43 Score=435.80 Aligned_cols=566 Identities=14% Similarity=0.134 Sum_probs=387.6
Q ss_pred HHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc-CCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHh
Q 001492 288 LNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA-LNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRR 366 (1067)
Q Consensus 288 ~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~-~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~r 366 (1067)
..++.++.+.+..+ -|+|-.|..-...+..++.++ ...++.|..|..++..- + |+.+-.
T Consensus 188 ~~FA~~v~~~~~~~----~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e--i--------------fr~LP~ 247 (854)
T PLN02205 188 KIFADRIMEVINPE----DDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE--I--------------YKTLPI 247 (854)
T ss_pred HHHHHHHHHHhCCC----CCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChH--H--------------HhhCCc
Confidence 34555555544310 279999987555566666554 45789999998866441 1 111111
Q ss_pred HHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHh-----cCcccCCCCCCCEEEeCCCCCCCCccCCCC
Q 001492 367 IEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARAR-----RGVNCHGRYMPRMVVIPPGMDFSNVVAQED 441 (1067)
Q Consensus 367 i~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~-----~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~ 441 (1067)
.+.--..+-.||.|-..|..++..+... ..+.|+.... .|+...|+.. ++.++|.|||+..|.....
T Consensus 248 r~eiL~glL~aDlIGFht~~yar~Fl~~-------~~r~lgl~~~~~~g~~~~~~~Gr~v-~v~~~PigId~~~~~~~~~ 319 (854)
T PLN02205 248 REELLRALLNSDLIGFHTFDYARHFLSC-------CSRMLGLSYESKRGYIGLEYYGRTV-SIKILPVGIHMGQLQSVLS 319 (854)
T ss_pred HHHHHHHHhcCCeEEecCHHHHHHHHHH-------HHHHhCCcccCCCcceeEEECCcEE-EEEEEeCeEcHHHHHHHhc
Confidence 1111234678999999999998877553 2333433222 2455556666 8999999999998876553
Q ss_pred CCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcE----EE-
Q 001492 442 TPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANL----TL- 516 (1067)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l----~l- 516 (1067)
.+++...+++ ++.-+..+++++|+.++|+|+.|||...+.||+++ |+.+|.+ +|
T Consensus 320 ~~~~~~~~~~-------------------l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~--L~~~P~~~gkvvlv 378 (854)
T PLN02205 320 LPETEAKVKE-------------------LIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQL--LMQHPEWQGKVVLV 378 (854)
T ss_pred ChhHHHHHHH-------------------HHHHhccCCCEEEEEccCcccccCHHHHHHHHHHH--HHhCccccCCEEEE
Confidence 3333332222 22222224678999999999999999999999999 4666653 32
Q ss_pred --EEecC---CChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHH
Q 001492 517 --IMGNR---DDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIE 591 (1067)
Q Consensus 517 --IvG~~---~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllE 591 (1067)
++..+ +++++++.+..+.+++||..+.+.++.+.+++...++++++.++|+.| ||++++|+++||+|+.+|
T Consensus 379 Qia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~A----Dv~lVT~lRDGMNLva~E 454 (854)
T PLN02205 379 QIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVA----ECCLVTAVRDGMNLIPYE 454 (854)
T ss_pred EEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhc----cEEEeccccccccccchh
Confidence 33444 678889999999999999999999999988889999999999999999 999999999999999999
Q ss_pred HHHc--------------------CCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHH-HHHH
Q 001492 592 AAAH--------------------GLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECR-KNGW 650 (1067)
Q Consensus 592 AmA~--------------------G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~-~~~~ 650 (1067)
|+|| |+.||+..+|+..++ ..+++|||+|++++|+||.++|++|...++.+ +..+
T Consensus 455 yia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L----~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~ 530 (854)
T PLN02205 455 YIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL----SGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHY 530 (854)
T ss_pred eeEEccCccccccccccccccCCCCceEeeeccchhHHh----CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 9987 678999999998888 35899999999999999999999775555444 4455
Q ss_pred HHHHcCCHHHHHHHHHHHHHHhHhcCCCCCCCCcchhhhhhhcccccchhhhhhhccccccCCCCCCCCCCCcccccCCC
Q 001492 651 KNIHLFSWPEHCRTYLTRVAACRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMSLRLSVDGDKSSLNGSLDYTAASSG 730 (1067)
Q Consensus 651 ~~~~~fsw~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (1067)
+++..++...|++.|+.-++.....+........ .+.-+.+ .+.+|-
T Consensus 531 ~~v~~~d~~~W~~~fl~~l~~~~~~~~~~~~~~~---------g~g~~~~-------~~~~~~----------------- 577 (854)
T PLN02205 531 RYVSTHDVGYWARSFLQDLERTCRDHSRRRCWGI---------GFGLSFR-------VVALDP----------------- 577 (854)
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHHHHhhhhhccc---------ccccccc-------cccccc-----------------
Confidence 5568999999999999998876443211100000 0000000 000000
Q ss_pred CchhhHHHHHHhhccCCCCCCcchHHHHhhhhcccccCcccccCCeEEEEEEeCCCCCCCCc---hhhHHHHHHHHHHHH
Q 001492 731 DPVQDQVKRVLSKIKKPDSDSNDKEAEKKLLENVVSKYPMLRRRRRLIVIALDCYDSKGAPD---KKMIQIMYDVFKAVR 807 (1067)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~klllia~DiDGTLl~~~---~~i~~~~~~al~~l~ 807 (1067)
.-+....+.++.+|+++.+ |++++ |+||||++.. ..+++.++++|++|.
T Consensus 578 ~~~~l~~~~i~~~y~~~~~--------------------------rlI~L--DyDGTLlp~~~~~~~p~~~~~~~L~~L~ 629 (854)
T PLN02205 578 NFRKLSMEHIVSAYKRTTT--------------------------RAILL--DYDGTLMPQASIDKSPSSKSIDILNTLC 629 (854)
T ss_pred cccccCHHHHHHHHHhhcC--------------------------eEEEE--ecCCcccCCccccCCCCHHHHHHHHHHH
Confidence 0113456778888887655 65554 9999977543 367789999999986
Q ss_pred hcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecCCCcccCCcCCCChhhhhccccccccchhH
Q 001492 808 LDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLK 887 (1067)
Q Consensus 808 ~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~ 887 (1067)
++. + + .|+|+|||++.++.++|.... ++ ++|++||+++..++...........+..|...+ ...+.
T Consensus 630 ~d~--g-~-~VaIvSGR~~~~L~~~f~~~~-~l----~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v-----~~i~~ 695 (854)
T PLN02205 630 RDK--N-N-MVFIVSARSRKTLADWFSPCE-KL----GIAAEHGYFLRLKRDVEWETCVPVADCSWKQIA-----EPVMQ 695 (854)
T ss_pred hcC--C-C-EEEEEeCCCHHHHHHHhCCCC-Ce----EEEEeCCEEEEeCCCceeeecchhhhHHHHHHH-----HHHHH
Confidence 553 3 5 699999999999999998742 11 699999999876642111000111133444332 12234
Q ss_pred HHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCCchH---HHHHHHHHHHhc--CCcEEEEEeeCCeeEEE
Q 001492 888 KTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKAR---RIDDLRQKLRMR--GLRCHPMYCRNSTRMQI 962 (1067)
Q Consensus 888 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~---~~~el~~~L~~~--~~~~~v~~s~~~~~lEI 962 (1067)
.+..+.++++.+.+ ...++||+.+.+... ..+++...+... ...+ .+.++. .++||
T Consensus 696 ~y~ertpGs~IE~K-----------------~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~-~v~~G~-~vvEV 756 (854)
T PLN02205 696 LYTETTDGSTIEDK-----------------ETALVWCYEDADPDFGSCQAKELLDHLESVLANEPV-TVKSGQ-NIVEV 756 (854)
T ss_pred HHhcCCCchhheec-----------------ceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCce-EEEECC-cEEEE
Confidence 44555566666554 567888886553111 123444444322 1122 234444 59999
Q ss_pred ecCCCCHHHHHHHHHH---HhCCCcccEEEEecCCCCCChhhhhcCCc
Q 001492 963 VPLLASRSQALRYLFV---RWRLNVANMFVILGESGDTDYEELISGAH 1007 (1067)
Q Consensus 963 ~p~gasKg~AL~~L~~---~~gi~~e~vva~fGDs~N~D~~eML~~ag 1007 (1067)
.|.++|||.|++.|++ ++|++++.+++ |||+.| | ++||+.++
T Consensus 757 ~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~-~GDD~n-D-edMF~~~~ 801 (854)
T PLN02205 757 KPQGVSKGLVAKRLLSIMQERGMLPDFVLC-IGDDRS-D-EDMFEVIT 801 (854)
T ss_pred EeCCCCHHHHHHHHHHHHHhcCCCcccEEE-EcCCcc-H-HHHHHHhh
Confidence 9999999999999975 46999999988 999999 9 99999875
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=401.38 Aligned_cols=517 Identities=18% Similarity=0.183 Sum_probs=337.9
Q ss_pred hhhhhHHHHH--hhhh-----hhhhcHHHHHHHHHHHHhhhhchhhhhhhhhcccCCCcCCCcccccCCCCCcccccccc
Q 001492 78 LENMCWRIWH--LTRK-----KKQLEWEELQRLANRRLEREQGRRDVTEDMSEDLSEGEKGDGVGEIQTPDTPRKKFQRN 150 (1067)
Q Consensus 78 ~~~~~~~~~~--~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (1067)
-..|-|.+|- |-|= .+-|--+||.-+-+--|.|+..=+++--+... +.-..+
T Consensus 408 ~~~~~~~~~~~lll~id~~~~~~~~~~~~a~~lr~~~~~~~~~~~~~~~~~~~---------------------~~~~~~ 466 (977)
T PLN02939 408 ADDMPSEFWSRILLLIDGWLLEKKISNNDAKLLREMVWKRDGRIREAYLSCKG---------------------KNEREA 466 (977)
T ss_pred hhhCCHHHHHHHHHHHHHHHHhccCChhhHHHHHHHHHhhhhhHHHHHHHHhc---------------------CchHHH
Confidence 4579999994 2221 22267778877777777777776777666543 222345
Q ss_pred cccccccccccCCCceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCC
Q 001492 151 FSNLEVWSDDKKEKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYG 230 (1067)
Q Consensus 151 ~~~~~~~~~~~~~~~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~ 230 (1067)
.+.+..|....+.++|||++|+.... |+ ..+||..-++..|+++|+++| |+|.|+++.+..-..+...+
T Consensus 467 ~~~~~~~~~~~~~~~mkILfVasE~a----P~-----aKtGGLaDVv~sLPkAL~~~G--hdV~VIlP~Y~~i~~~~~~~ 535 (977)
T PLN02939 467 VENFLKLTLSGTSSGLHIVHIAAEMA----PV-----AKVGGLADVVSGLGKALQKKG--HLVEIVLPKYDCMQYDQIRN 535 (977)
T ss_pred HHHHHHhccCCCCCCCEEEEEEcccc----cc-----cccccHHHHHHHHHHHHHHcC--CeEEEEeCCCcccChhhhhc
Confidence 55666777777788999999997664 22 679999999999999999999 99999999764321110000
Q ss_pred Cc---ccc---cCCCCCC-CCccccccCCeEEEeccC-CCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCC
Q 001492 231 EP---AEM---LTGGPED-DGIEVGESSGAYIIRIPF-GPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQ 302 (1067)
Q Consensus 231 ~~---~e~---l~~~~~~-~~~~~~~~~gv~i~ri~~-~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~ 302 (1067)
.. ... .. ++.. +..-....+|+.++.|.. .+. .|..+..++.+-..+ .++.. +.++..+.+...
T Consensus 536 ~~~~~~~~~~~~~-g~~~~~~v~~~~~~GV~vyfId~~~~~-~fF~R~~iYg~~Dn~----~RF~~-FsrAaLe~~~~~- 607 (977)
T PLN02939 536 LKVLDVVVESYFD-GNLFKNKIWTGTVEGLPVYFIEPQHPS-KFFWRAQYYGEHDDF----KRFSY-FSRAALELLYQS- 607 (977)
T ss_pred ccccceEEEEeec-CceeEEEEEEEEECCeeEEEEecCCch-hccCCCCCCCCccHH----HHHHH-HHHHHHHHHHhc-
Confidence 00 000 00 0000 001112235777777742 121 123333333222111 11111 112222222111
Q ss_pred CCCceEEEEcCCchhHHHHHHHh------cCCCcEEEEeCCCchhhH---HHHHhhCCCChhhhh---h-HhHHHHhHHH
Q 001492 303 PVWPYVIHGHYADAGDSAALLSG------ALNVPMVLTGHSLGRNKL---EQLLKQGRQSKEDIN---S-TYKIMRRIEG 369 (1067)
Q Consensus 303 ~~~pDvIh~h~~~a~~~a~~l~~------~~giP~V~t~H~l~~~~~---~~l~~~g~~~~~~i~---~-~y~~~~ri~~ 369 (1067)
..+|||||+|.|.++.++.++.. ..++|+|+|+|++..... ..+-..|. +...+. . ...+..++..
T Consensus 608 ~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL-~~~~l~~~d~le~~~~~~iN~ 686 (977)
T PLN02939 608 GKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGL-DVHQLDRPDRMQDNAHGRINV 686 (977)
T ss_pred CCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCC-CHHHccChhhhhhccCCchHH
Confidence 25799999999988887554432 245899999999853221 11111111 111110 0 0001223333
Q ss_pred hhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcc-cCCCCCCCEEEeCCCCCCCCccCCCCCCccccc
Q 001492 370 EELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVN-CHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGE 448 (1067)
Q Consensus 370 E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~-~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~ 448 (1067)
-+..+..||.|+|+|+.+.+++...+ + .|++ .++.+..++.+||||||++.|.|... ..
T Consensus 687 LK~GIv~AD~VtTVSptYA~EI~te~-G--------------~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD-----~~ 746 (977)
T PLN02939 687 VKGAIVYSNIVTTVSPTYAQEVRSEG-G--------------RGLQDTLKFHSKKFVGILNGIDTDTWNPSTD-----RF 746 (977)
T ss_pred HHHHHHhCCeeEeeeHHHHHHHHHHh-c--------------cchHHHhccccCCceEEecceehhhcCCccc-----cc
Confidence 45567789999999999998876522 1 1221 13445569999999999999987641 11
Q ss_pred cccccCCCCCCCCCCcchhhHhhhhhccC---CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCh
Q 001492 449 LTSLIGGTDGSSPKAIPAIWSDVMRFLTN---PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLT-LIMGNRDDI 524 (1067)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~-lIvG~~~~~ 524 (1067)
+...+...+...+... ....+.+++.+ ++.|+|++|||+.+.||++.+++|+..+.. .++. +|+|+|++.
T Consensus 747 L~~~Ys~~dl~GK~~n--K~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~----~dvqLVIvGdGp~~ 820 (977)
T PLN02939 747 LKVQYNANDLQGKAAN--KAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE----LGGQFVLLGSSPVP 820 (977)
T ss_pred cccccChhhhhhhhhh--hHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh----cCCEEEEEeCCCcH
Confidence 1111111111111111 11233445544 357999999999999999999999988742 2344 588988642
Q ss_pred hhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCC
Q 001492 525 EEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKN 604 (1067)
Q Consensus 525 ~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~ 604 (1067)
.+...+..++.+++..++|.|+|.++......+|+.| |+||+||.+||||++++|||+||+|+|++++
T Consensus 821 --------~~e~eL~~La~~l~l~drV~FlG~~de~lah~IYAaA----DIFLmPSr~EPfGLvqLEAMAyGtPPVVs~v 888 (977)
T PLN02939 821 --------HIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAAS----DMFIIPSMFEPCGLTQMIAMRYGSVPIVRKT 888 (977)
T ss_pred --------HHHHHHHHHHHHcCCCCeEEEEeccCHHHHHHHHHhC----CEEEECCCccCCcHHHHHHHHCCCCEEEecC
Confidence 2346677888999988999999998766678999999 9999999999999999999999999999999
Q ss_pred CCchhhhcc---------CCceEEeCCCCHHHHHHHHHHhhc----CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 001492 605 GGPVDIHRA---------LNNGLLVDPHDQQAIADALLKLVS----EKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAA 671 (1067)
Q Consensus 605 Gg~~eiv~~---------~~~Gllv~p~d~~~la~aL~~ll~----d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~ 671 (1067)
||..|+|.+ +.+|++|+|.|+++|+++|.+++. +|+.|.+++++++. +.|||+.++++|+++|+.
T Consensus 889 GGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am~--~dFSWe~~A~qYeeLY~~ 966 (977)
T PLN02939 889 GGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMN--IDFSWDSSASQYEELYQR 966 (977)
T ss_pred CCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH--hcCCHHHHHHHHHHHHHH
Confidence 999998865 468999999999999999999875 89999999987653 589999999999999999
Q ss_pred hHhc
Q 001492 672 CRMR 675 (1067)
Q Consensus 672 ~~~~ 675 (1067)
++.+
T Consensus 967 ll~~ 970 (977)
T PLN02939 967 AVAR 970 (977)
T ss_pred HHHh
Confidence 8864
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=382.78 Aligned_cols=400 Identities=27% Similarity=0.377 Sum_probs=291.5
Q ss_pred EEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccc
Q 001492 168 IVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEV 247 (1067)
Q Consensus 168 I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~ 247 (1067)
|++|+.|.. |...+-..+.||+++|+.+||++|+++| |+|+|+|+....+. + +. .
T Consensus 1 ~~~~~~~~~----~~~~~~~~~~GG~e~~v~~la~~L~~~G--~~V~v~~~~~~~~~-----~-~~-------------~ 55 (405)
T TIGR03449 1 VAMISMHTS----PLQQPGTGDAGGMNVYILETATELARRG--IEVDIFTRATRPSQ-----P-PV-------------V 55 (405)
T ss_pred CeEEeccCC----ccccCCCcCCCCceehHHHHHHHHhhCC--CEEEEEecccCCCC-----C-Cc-------------c
Confidence 567877775 3333322457999999999999999999 99999997532111 0 00 1
Q ss_pred cccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcC
Q 001492 248 GESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGAL 327 (1067)
Q Consensus 248 ~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~ 327 (1067)
...+|+.+++++.++.. ...+..+...+..|....+. .+..+ ...+|||||+|++..+.++.++++.+
T Consensus 56 ~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-------~~~~~----~~~~~Diih~h~~~~~~~~~~~~~~~ 123 (405)
T TIGR03449 56 EVAPGVRVRNVVAGPYE-GLDKEDLPTQLCAFTGGVLR-------AEARH----EPGYYDLIHSHYWLSGQVGWLLRDRW 123 (405)
T ss_pred ccCCCcEEEEecCCCcc-cCCHHHHHHHHHHHHHHHHH-------HHhhc----cCCCCCeEEechHHHHHHHHHHHHhc
Confidence 22368999998765541 11111111111112211111 11110 11469999999987788888888889
Q ss_pred CCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHH
Q 001492 328 NVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLR 407 (1067)
Q Consensus 328 giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~ 407 (1067)
++|+|+|.|+++..+...+. .+.. ......+ ..|+..+..+|.|+++|+...+.+...+..
T Consensus 124 ~~p~v~t~h~~~~~~~~~~~-~~~~------~~~~~~~--~~e~~~~~~~d~vi~~s~~~~~~~~~~~~~---------- 184 (405)
T TIGR03449 124 GVPLVHTAHTLAAVKNAALA-DGDT------PEPEARR--IGEQQLVDNADRLIANTDEEARDLVRHYDA---------- 184 (405)
T ss_pred CCCEEEeccchHHHHHHhcc-CCCC------CchHHHH--HHHHHHHHhcCeEEECCHHHHHHHHHHcCC----------
Confidence 99999999987532211110 0000 0001111 135667899999999999877766544321
Q ss_pred HHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEe
Q 001492 408 ARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALS 487 (1067)
Q Consensus 408 ~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vg 487 (1067)
+..++.+||||+|.+.|.+... .....++..++++++|+++|
T Consensus 185 ------------~~~ki~vi~ngvd~~~~~~~~~--------------------------~~~~~~~~~~~~~~~i~~~G 226 (405)
T TIGR03449 185 ------------DPDRIDVVAPGADLERFRPGDR--------------------------ATERARLGLPLDTKVVAFVG 226 (405)
T ss_pred ------------ChhhEEEECCCcCHHHcCCCcH--------------------------HHHHHhcCCCCCCcEEEEec
Confidence 2238999999999988864321 01122333456778999999
Q ss_pred CCCCCCCHHHHHHHHHhcccccCCCc--EEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHH
Q 001492 488 RPDPKKNITTLLKAFGECRPLRELAN--LTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPE 564 (1067)
Q Consensus 488 Rld~~Kgi~~ll~A~~~l~~l~~~~~--l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ 564 (1067)
|+.+.||++.+++|+..+.+ ..++ +.+ |+|+.+... .....++.+++..+++.++|.|+|+++.+++..
T Consensus 227 ~l~~~K~~~~li~a~~~l~~--~~~~~~~~l~ivG~~~~~g------~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~ 298 (405)
T TIGR03449 227 RIQPLKAPDVLLRAVAELLD--RDPDRNLRVIVVGGPSGSG------LATPDALIELAAELGIADRVRFLPPRPPEELVH 298 (405)
T ss_pred CCCcccCHHHHHHHHHHHHh--hCCCcceEEEEEeCCCCCc------chHHHHHHHHHHHcCCCceEEECCCCCHHHHHH
Confidence 99999999999999998853 3343 665 777532100 022456778889999999999999999999999
Q ss_pred HHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHH
Q 001492 565 IYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVE 644 (1067)
Q Consensus 565 ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~ 644 (1067)
+|+.| |++++||..|+||++++||||+|+|||+++.||..|++.++.+|++++|+|+++++++|.+++++++.+++
T Consensus 299 ~l~~a----d~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~~~~~~ 374 (405)
T TIGR03449 299 VYRAA----DVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDDPRTRIR 374 (405)
T ss_pred HHHhC----CEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhCHHHHHH
Confidence 99999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHhH
Q 001492 645 CRKNGWKNIHLFSWPEHCRTYLTRVAACR 673 (1067)
Q Consensus 645 ~~~~~~~~~~~fsw~~~a~~~l~~~~~~~ 673 (1067)
++.++++.+++|||+.++++|+++|.+++
T Consensus 375 ~~~~~~~~~~~fsw~~~~~~~~~~y~~~~ 403 (405)
T TIGR03449 375 MGAAAVEHAAGFSWAATADGLLSSYRDAL 403 (405)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Confidence 99999998889999999999999999875
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=387.89 Aligned_cols=436 Identities=20% Similarity=0.214 Sum_probs=284.0
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCc
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGI 245 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1067)
|||+|||.+.+ |. ..+||+..+|..|+++|+++| |+|+|+|+.+.. ......... .+... ..+..
T Consensus 1 m~i~~vs~e~~----P~-----~k~GGl~~~v~~L~~~L~~~G--~~V~v~~p~y~~--~~~~~~~~~-~~~~~-~~~~~ 65 (466)
T PRK00654 1 MKILFVASECA----PL-----IKTGGLGDVVGALPKALAALG--HDVRVLLPGYPA--IREKLRDAQ-VVGRL-DLFTV 65 (466)
T ss_pred CeEEEEEcccc----cC-----cccCcHHHHHHHHHHHHHHCC--CcEEEEecCCcc--hhhhhcCce-EEEEe-eeEEE
Confidence 89999998876 21 459999999999999999999 999999986532 110000000 00000 00000
Q ss_pred cc--cccCCeEEEeccCCCCccCcccccccchhHH------HHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchh
Q 001492 246 EV--GESSGAYIIRIPFGPRDKYLRKELLWPYIQE------FVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAG 317 (1067)
Q Consensus 246 ~~--~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~------f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~ 317 (1067)
.. ...+|+.+++++.. .+..+..+..+... |...++..+.+ + ..+|||||+|+|.++
T Consensus 66 ~~~~~~~~gv~v~~v~~~---~~~~~~~~y~~~d~~~r~~~f~~~~~~~~~~--------~----~~~pDiiH~h~w~~~ 130 (466)
T PRK00654 66 LFGHLEGDGVPVYLIDAP---HLFDRPSGYGYPDNGERFAFFSWAAAEFAEG--------L----DPRPDIVHAHDWHTG 130 (466)
T ss_pred EEEeEEcCCceEEEEeCH---HHcCCCCCCCCcChHHHHHHHHHHHHHHHHh--------c----CCCCceEEECCcHHH
Confidence 00 12368888888752 23333334433322 11222221111 1 136999999999999
Q ss_pred HHHHHHHhcC-----CCcEEEEeCCCchhh---HHHHHhhCCCChhhhh-hHhHHHHhHHHhhcccccCCEEEeCCHHHH
Q 001492 318 DSAALLSGAL-----NVPMVLTGHSLGRNK---LEQLLKQGRQSKEDIN-STYKIMRRIEGEELSLDAAELVITSTKQEI 388 (1067)
Q Consensus 318 ~~a~~l~~~~-----giP~V~t~H~l~~~~---~~~l~~~g~~~~~~i~-~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~ 388 (1067)
.++.+++..+ ++|+|+|.|++.... ...+-..|. +..... ..+.+...+...+.++..||.|+|+|+...
T Consensus 131 ~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~ 209 (466)
T PRK00654 131 LIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGL-PAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYA 209 (466)
T ss_pred HHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCC-ChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHH
Confidence 9888887653 799999999985321 011100110 100000 000011122334567899999999999888
Q ss_pred HHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhh
Q 001492 389 DEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIW 468 (1067)
Q Consensus 389 ~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (1067)
+++...+.++. +... ++.+..++.+||||||++.|.|... ..+...+...+...+. ....
T Consensus 210 ~ei~~~~~~~g--l~~~-----------~~~~~~ki~vI~NGid~~~~~p~~~-----~~~~~~~~~~~~~~k~--~~k~ 269 (466)
T PRK00654 210 REITTPEFGYG--LEGL-----------LRARSGKLSGILNGIDYDIWNPETD-----PLLAANYSADDLEGKA--ENKR 269 (466)
T ss_pred HHhccccCCcC--hHHH-----------HHhcccCceEecCCCCccccCCccC-----cccccccChhhhhchH--HHHH
Confidence 87654322110 0000 1122348999999999999987541 1111111000000000 0001
Q ss_pred HhhhhhccC-CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCChhhhhccchHHHHHHHHHHHhcC
Q 001492 469 SDVMRFLTN-PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLT-LIMGNRDDIEEMSSGNASVLITVLKLIDKYD 546 (1067)
Q Consensus 469 ~~~~~~~~~-~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~-lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~ 546 (1067)
..+.++..+ ++.++|+++||+.+.||++.+++|+.++.+ . ++. +|+|+++. .+...+..++.+++
T Consensus 270 ~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~--~--~~~lvivG~g~~---------~~~~~l~~l~~~~~ 336 (466)
T PRK00654 270 ALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLE--Q--GGQLVLLGTGDP---------ELEEAFRALAARYP 336 (466)
T ss_pred HHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHh--c--CCEEEEEecCcH---------HHHHHHHHHHHHCC
Confidence 223344444 367899999999999999999999999853 2 344 47787652 23456677777776
Q ss_pred CCCcEEe-CCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccC------CceEE
Q 001492 547 LYGQVAY-PKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRAL------NNGLL 619 (1067)
Q Consensus 547 l~~~V~~-~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~------~~Gll 619 (1067)
. ++.+ .|+ +.+.++.+|+.| |+||+||.+||||++++|||+||+|+|+++.||+.|+|.++ .+|++
T Consensus 337 ~--~v~~~~g~-~~~~~~~~~~~a----Dv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~l 409 (466)
T PRK00654 337 G--KVGVQIGY-DEALAHRIYAGA----DMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFV 409 (466)
T ss_pred C--cEEEEEeC-CHHHHHHHHhhC----CEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEE
Confidence 3 4554 555 445577899999 99999999999999999999999999999999999999888 89999
Q ss_pred eCCCCHHHHHHHHHHhhc---CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHh
Q 001492 620 VDPHDQQAIADALLKLVS---EKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRM 674 (1067)
Q Consensus 620 v~p~d~~~la~aL~~ll~---d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~ 674 (1067)
|+|.|+++++++|.++++ +++.+.++++++++ +.|||+.++++|+++|++++.
T Consensus 410 v~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 410 FDDFNAEDLLRALRRALELYRQPPLWRALQRQAMA--QDFSWDKSAEEYLELYRRLLG 465 (466)
T ss_pred eCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHHHHhh
Confidence 999999999999999887 77888888887753 589999999999999998764
|
|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=373.14 Aligned_cols=399 Identities=15% Similarity=0.124 Sum_probs=287.3
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCC--CcCCCcccccCCCCCCC
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVD--WSYGEPAEMLTGGPEDD 243 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~--~~y~~~~e~l~~~~~~~ 243 (1067)
|||++|+.+++ |+.||.+.++.+|+++|.++| |+|+|+|+....|... ..|....
T Consensus 1 mkIlii~~~~~-----------P~~~g~~~~~~~l~~~L~~~G--~~V~vit~~~~~~~~~~~~~~~~~~---------- 57 (412)
T PRK10307 1 MKILVYGINYA-----------PELTGIGKYTGEMAEWLAARG--HEVRVITAPPYYPQWRVGEGYSAWR---------- 57 (412)
T ss_pred CeEEEEecCCC-----------CCccchhhhHHHHHHHHHHCC--CeEEEEecCCCCCCCCCCccccccc----------
Confidence 79999997766 778999999999999999999 9999999864333221 0111000
Q ss_pred CccccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc--hhHHHH
Q 001492 244 GIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD--AGDSAA 321 (1067)
Q Consensus 244 ~~~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~--a~~~a~ 321 (1067)
...+..+|+.++|+|............+... ..|.... .+.+..++ ..+||+||+|.+. ....+.
T Consensus 58 -~~~~~~~~i~v~r~~~~~~~~~~~~~~~~~~-~~~~~~~-------~~~~~~~~----~~~~Div~~~~p~~~~~~~~~ 124 (412)
T PRK10307 58 -YRRESEGGVTVWRCPLYVPKQPSGLKRLLHL-GSFALSS-------FFPLLAQR----RWRPDRVIGVVPTLFCAPGAR 124 (412)
T ss_pred -ceeeecCCeEEEEccccCCCCccHHHHHHHH-HHHHHHH-------HHHHhhcc----CCCCCEEEEeCCcHHHHHHHH
Confidence 0012246899999986322100000001100 0111111 11111111 1469999999863 355667
Q ss_pred HHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchH
Q 001492 322 LLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVK 401 (1067)
Q Consensus 322 ~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~ 401 (1067)
.+++..++|+|+++|+.+++... ..|.+... ...++... .|+.+++.||.|+++|+...+.+...
T Consensus 125 ~~~~~~~~~~v~~~~d~~~~~~~---~~~~~~~~---~~~~~~~~--~~~~~~~~ad~ii~~S~~~~~~~~~~------- 189 (412)
T PRK10307 125 LLARLSGARTWLHIQDYEVDAAF---GLGLLKGG---KVARLATA--FERSLLRRFDNVSTISRSMMNKAREK------- 189 (412)
T ss_pred HHHHhhCCCEEEEeccCCHHHHH---HhCCccCc---HHHHHHHH--HHHHHHhhCCEEEecCHHHHHHHHHc-------
Confidence 78888999999999998764422 22322111 11222232 37778999999999999887765432
Q ss_pred HHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCc
Q 001492 402 LEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKP 481 (1067)
Q Consensus 402 l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (1067)
| ....++.+||||+|.+.|.+... . .....+..+...++++
T Consensus 190 -----------~-----~~~~~i~vi~ngvd~~~~~~~~~--~---------------------~~~~~~~~~~~~~~~~ 230 (412)
T PRK10307 190 -----------G-----VAAEKVIFFPNWSEVARFQPVAD--A---------------------DVDALRAQLGLPDGKK 230 (412)
T ss_pred -----------C-----CCcccEEEECCCcCHhhcCCCCc--c---------------------chHHHHHHcCCCCCCE
Confidence 1 11238999999999988865431 0 0001122333456678
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCC
Q 001492 482 MILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQY 560 (1067)
Q Consensus 482 ~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~ 560 (1067)
+|+|+||+.+.||++.|++|+..+. ..+++.+ |+|+++. ...+.+++.++++. +|.|+|+++.+
T Consensus 231 ~i~~~G~l~~~kg~~~li~a~~~l~---~~~~~~l~ivG~g~~-----------~~~l~~~~~~~~l~-~v~f~G~~~~~ 295 (412)
T PRK10307 231 IVLYSGNIGEKQGLELVIDAARRLR---DRPDLIFVICGQGGG-----------KARLEKMAQCRGLP-NVHFLPLQPYD 295 (412)
T ss_pred EEEEcCccccccCHHHHHHHHHHhc---cCCCeEEEEECCChh-----------HHHHHHHHHHcCCC-ceEEeCCCCHH
Confidence 9999999999999999999999873 3466665 8898864 34566778888886 79999999999
Q ss_pred CHHHHHHHhhcCCcEEEecCCCCC----CCHHHHHHHHcCCCEEEcCCCC--chhhhccCCceEEeCCCCHHHHHHHHHH
Q 001492 561 DVPEIYRLAAKTKGVFINPALVEP----FGLTLIEAAAHGLPMVATKNGG--PVDIHRALNNGLLVDPHDQQAIADALLK 634 (1067)
Q Consensus 561 dl~~ly~~A~~~~dV~v~ps~~Eg----fgltllEAmA~G~PVVat~~Gg--~~eiv~~~~~Gllv~p~d~~~la~aL~~ 634 (1067)
+++.+|+.| |++|+|+..|+ +|.+++||||||+|||+|+.|| ..+++. .+|++++|+|+++++++|.+
T Consensus 296 ~~~~~~~~a----Di~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~ 369 (412)
T PRK10307 296 RLPALLKMA----DCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAA 369 (412)
T ss_pred HHHHHHHhc----CEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHH
Confidence 999999999 99999999998 5677899999999999999876 458876 68999999999999999999
Q ss_pred hhcCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHhHhc
Q 001492 635 LVSEKNLWVECRKNGWKNIH-LFSWPEHCRTYLTRVAACRMR 675 (1067)
Q Consensus 635 ll~d~~~~~~~~~~~~~~~~-~fsw~~~a~~~l~~~~~~~~~ 675 (1067)
++++++++++|++++++.++ +|||+.++++|++.|++++..
T Consensus 370 l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 411 (412)
T PRK10307 370 LARQALLRPKLGTVAREYAERTLDKENVLRQFIADIRGLVAE 411 (412)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999994 899999999999999988753
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=391.68 Aligned_cols=424 Identities=17% Similarity=0.130 Sum_probs=280.6
Q ss_pred CCceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcc-cccCCCCC
Q 001492 163 EKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPA-EMLTGGPE 241 (1067)
Q Consensus 163 ~~~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~-e~l~~~~~ 241 (1067)
.++|+|+|||.+.. |+ ..+||...+|..|+++|+++| |+|.|+|+.+............. ..+.....
T Consensus 585 ~~pM~Il~VSsE~~----P~-----aKvGGLgDVV~sLp~ALa~~G--h~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~ 653 (1036)
T PLN02316 585 EPPMHIVHIAVEMA----PI-----AKVGGLGDVVTSLSRAVQDLN--HNVDIILPKYDCLNLSHVKDLHYQRSYSWGGT 653 (1036)
T ss_pred CCCcEEEEEEcccC----CC-----CCcCcHHHHHHHHHHHHHHcC--CEEEEEecCCcccchhhcccceEEEEeccCCE
Confidence 45699999998876 32 469999999999999999999 99999999764321100000000 00000000
Q ss_pred CCCccccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHH
Q 001492 242 DDGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAA 321 (1067)
Q Consensus 242 ~~~~~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~ 321 (1067)
.+..-....+|+.++.+.... .+.....+..+.+.+. ++. .+.++..+.+.. ...+|||||+|+|.++.+++
T Consensus 654 ~~~v~~~~~~GV~vyfl~~~~--~~F~r~~~Yg~~Dd~~-RF~----~F~~Aale~l~~-~~~~PDIIHaHDW~talva~ 725 (1036)
T PLN02316 654 EIKVWFGKVEGLSVYFLEPQN--GMFWAGCVYGCRNDGE-RFG----FFCHAALEFLLQ-SGFHPDIIHCHDWSSAPVAW 725 (1036)
T ss_pred EEEEEEEEECCcEEEEEeccc--cccCCCCCCCchhHHH-HHH----HHHHHHHHHHHh-cCCCCCEEEECCChHHHHHH
Confidence 000011223577777776321 1111122222211111 011 111111111111 12579999999998888888
Q ss_pred HHHhc------CCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhc
Q 001492 322 LLSGA------LNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLY 395 (1067)
Q Consensus 322 ~l~~~------~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y 395 (1067)
+++.. .++|+|+|+|++.... .++ +.++..||.|+|+|+.+.+++...+
T Consensus 726 llk~~~~~~~~~~~p~V~TiHnl~~~~-------------------n~l------k~~l~~AD~ViTVS~tya~EI~~~~ 780 (1036)
T PLN02316 726 LFKDHYAHYGLSKARVVFTIHNLEFGA-------------------NHI------GKAMAYADKATTVSPTYSREVSGNS 780 (1036)
T ss_pred HHHHhhhhhccCCCCEEEEeCCcccch-------------------hHH------HHHHHHCCEEEeCCHHHHHHHHhcc
Confidence 87663 3589999999863211 011 1346889999999999887765422
Q ss_pred CCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCC-CCCCCcchhhHhhhhh
Q 001492 396 DGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDG-SSPKAIPAIWSDVMRF 474 (1067)
Q Consensus 396 ~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 474 (1067)
. + ..+..++.+||||||++.|.|.... .+...+...+. ..+. ......+.++
T Consensus 781 ~-l-------------------~~~~~Kl~vI~NGID~~~w~P~tD~-----~lp~~y~~~~~~~gK~--~~k~~Lr~~l 833 (1036)
T PLN02316 781 A-I-------------------APHLYKFHGILNGIDPDIWDPYNDN-----FIPVPYTSENVVEGKR--AAKEALQQRL 833 (1036)
T ss_pred C-c-------------------ccccCCEEEEECCccccccCCcccc-----cccccCCchhhhhhhh--hhHHHHHHHh
Confidence 1 0 0112489999999999998775410 00000000000 0000 0011123445
Q ss_pred ccC-CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCChhhhhccchHHHHHHHHHHHhcCC--CCc
Q 001492 475 LTN-PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLT-LIMGNRDDIEEMSSGNASVLITVLKLIDKYDL--YGQ 550 (1067)
Q Consensus 475 ~~~-~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~-lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l--~~~ 550 (1067)
..+ ++.|+|++||||.+.||++.|++|+..+. .. +.. +|+|++++. .+...+..++.++++ .++
T Consensus 834 GL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll--~~--~~qlVIvG~Gpd~--------~~e~~l~~La~~Lg~~~~~r 901 (1036)
T PLN02316 834 GLKQADLPLVGIITRLTHQKGIHLIKHAIWRTL--ER--NGQVVLLGSAPDP--------RIQNDFVNLANQLHSSHHDR 901 (1036)
T ss_pred CCCcccCeEEEEEeccccccCHHHHHHHHHHHh--hc--CcEEEEEeCCCCH--------HHHHHHHHHHHHhCccCCCe
Confidence 444 36799999999999999999999999874 22 333 478988652 234667788888765 578
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccC-------------Cce
Q 001492 551 VAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRAL-------------NNG 617 (1067)
Q Consensus 551 V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~-------------~~G 617 (1067)
|.|.+..+......+|+.| |+||+||++|||||+++|||+||+|+|++++||+.|+|.++ .+|
T Consensus 902 V~f~g~~de~lah~iyaaA----DiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tG 977 (1036)
T PLN02316 902 ARLCLTYDEPLSHLIYAGA----DFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNG 977 (1036)
T ss_pred EEEEecCCHHHHHHHHHhC----cEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCce
Confidence 9998775332234799999 99999999999999999999999999999999999999874 589
Q ss_pred EEeCCCCHHHHHHHHHHhhcC-HHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHhH
Q 001492 618 LLVDPHDQQAIADALLKLVSE-KNLWVECRKNGWKNI-HLFSWPEHCRTYLTRVAACR 673 (1067)
Q Consensus 618 llv~p~d~~~la~aL~~ll~d-~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~~ 673 (1067)
++|++.|+++|+.+|.+++.+ ++....++..+++.+ +.|||+..+++|+++|+.+.
T Consensus 978 flf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 978 FSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred EEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999986 355566677777777 58999999999999998874
|
|
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=369.84 Aligned_cols=395 Identities=42% Similarity=0.631 Sum_probs=300.5
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
||+|++.|+.+-+.+ | .|+.||+++++.+|+++|+++| |+|+|+|.....+... .
T Consensus 1 ~~~~~~~~~~~~~~~---~-~~~~GG~~~~~~~l~~~L~~~g--~~V~v~~~~~~~~~~~-------------------~ 55 (398)
T cd03800 1 RIALISLHGSPLAQP---G-GADTGGQNVYVLELARALARLG--HEVDIFTRRIDDALPP-------------------I 55 (398)
T ss_pred CeEEEeccccccccC---C-CCCCCceeehHHHHHHHHhccC--ceEEEEEecCCcccCC-------------------c
Confidence 588888887643322 1 3789999999999999999999 9999999754221100 0
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA 326 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~ 326 (1067)
....+++.+++++..+. .+..+..+++++..|...+...+.. + ..+||+||+|++..+.++..+++.
T Consensus 56 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~-----~~~~Div~~~~~~~~~~~~~~~~~ 122 (398)
T cd03800 56 VELAPGVRVVRVPAGPA-EYLPKEELWPYLDEFADDLLRFLRR-------E-----GGRPDLIHAHYWDSGLVALLLARR 122 (398)
T ss_pred cccccceEEEecccccc-cCCChhhcchhHHHHHHHHHHHHHh-------c-----CCCccEEEEecCccchHHHHHHhh
Confidence 12235888999887655 4455555677766665555444332 0 026999999998888888888999
Q ss_pred CCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHH
Q 001492 327 LNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVL 406 (1067)
Q Consensus 327 ~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l 406 (1067)
.++|+|++.|+++.......... ..+....++..|+.+++.||.|+++|+...+.+...+..
T Consensus 123 ~~~~~i~~~h~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~--------- 184 (398)
T cd03800 123 LGIPLVHTFHSLGAVKRRHLGAA---------DTYEPARRIEAEERLLRAADRVIASTPQEAEELYSLYGA--------- 184 (398)
T ss_pred cCCceEEEeecccccCCcccccc---------cccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHHccc---------
Confidence 99999999998765332111000 001122233356778999999999999887776555432
Q ss_pred HHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEE
Q 001492 407 RARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILAL 486 (1067)
Q Consensus 407 ~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~v 486 (1067)
+..++.+||||+|.+.|.+.... ...+..+...+++++|+++
T Consensus 185 -------------~~~~~~vi~ng~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~i~~~ 226 (398)
T cd03800 185 -------------YPRRIRVVPPGVDLERFTPYGRA-------------------------EARRARLLRDPDKPRILAV 226 (398)
T ss_pred -------------cccccEEECCCCCccceecccch-------------------------hhHHHhhccCCCCcEEEEE
Confidence 11268999999999888654310 0001222334667899999
Q ss_pred eCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHH
Q 001492 487 SRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEI 565 (1067)
Q Consensus 487 gRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~l 565 (1067)
||+.+.||++.+++|+..+.. ..+++.+ ++|++..... ......++.+++.+++.++|.|+|+++.+++..+
T Consensus 227 gr~~~~k~~~~ll~a~~~l~~--~~~~~~l~i~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 299 (398)
T cd03800 227 GRLDPRKGIDTLIRAYAELPE--LRERANLVIVGGPRDDIL-----AMDEEELRELARELGVIDRVDFPGRVSREDLPAL 299 (398)
T ss_pred cccccccCHHHHHHHHHHHHH--hCCCeEEEEEECCCCcch-----hhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHH
Confidence 999999999999999999863 3456665 7777653211 1123456778888999999999999999999999
Q ss_pred HHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHH
Q 001492 566 YRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVEC 645 (1067)
Q Consensus 566 y~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~ 645 (1067)
|+.| |++++||..|+||++++||||||+|||+++.||..|++.++.+|++++++|+++++++|.+++++++.++++
T Consensus 300 ~~~a----di~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~ 375 (398)
T cd03800 300 YRAA----DVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPALRRRL 375 (398)
T ss_pred HHhC----CEEEecccccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHH
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-HcCCHHHHHHHHH
Q 001492 646 RKNGWKNI-HLFSWPEHCRTYL 666 (1067)
Q Consensus 646 ~~~~~~~~-~~fsw~~~a~~~l 666 (1067)
++++++.+ ++|||+.++++|+
T Consensus 376 ~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 376 SRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHHHHHHhCCHHHHHHHHh
Confidence 99999999 6999999999886
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-38 Score=373.98 Aligned_cols=377 Identities=19% Similarity=0.223 Sum_probs=272.4
Q ss_pred CCceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCC
Q 001492 163 EKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPED 242 (1067)
Q Consensus 163 ~~~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~ 242 (1067)
.++|||+++. +.. + .+..||++.++.+|+++|.++| |+|+|+|.....+.
T Consensus 56 ~~~mrI~~~~-~~~----~-----~~~~gG~~~~~~~l~~~L~~~G--~eV~vlt~~~~~~~------------------ 105 (465)
T PLN02871 56 SRPRRIALFV-EPS----P-----FSYVSGYKNRFQNFIRYLREMG--DEVLVVTTDEGVPQ------------------ 105 (465)
T ss_pred CCCceEEEEE-CCc----C-----CcccccHHHHHHHHHHHHHHCC--CeEEEEecCCCCCc------------------
Confidence 5789999997 222 1 1568999999999999999999 99999998532110
Q ss_pred CCccccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc-hhHHHH
Q 001492 243 DGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD-AGDSAA 321 (1067)
Q Consensus 243 ~~~~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~-a~~~a~ 321 (1067)
...++.+++++..+.. +... ..+.+ .+...+.. .+.+ .+|||||+|.+. ....+.
T Consensus 106 ------~~~g~~v~~~~~~~~~-~~~~-~~~~~--~~~~~l~~-------~i~~-------~kpDiIh~~~~~~~~~~~~ 161 (465)
T PLN02871 106 ------EFHGAKVIGSWSFPCP-FYQK-VPLSL--ALSPRIIS-------EVAR-------FKPDLIHASSPGIMVFGAL 161 (465)
T ss_pred ------cccCceeeccCCcCCc-cCCC-ceeec--cCCHHHHH-------HHHh-------CCCCEEEECCCchhHHHHH
Confidence 0125555544322110 1111 00000 01111111 1222 569999999864 344555
Q ss_pred HHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchH
Q 001492 322 LLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVK 401 (1067)
Q Consensus 322 ~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~ 401 (1067)
.+++..++|+|++.|+......... .. ...++.+. ..++..++.+|.|+++|+...+.+...+.
T Consensus 162 ~~ak~~~ip~V~~~h~~~~~~~~~~------~~---~~~~~~~~--~~~r~~~~~ad~ii~~S~~~~~~l~~~~~----- 225 (465)
T PLN02871 162 FYAKLLCVPLVMSYHTHVPVYIPRY------TF---SWLVKPMW--DIIRFLHRAADLTLVTSPALGKELEAAGV----- 225 (465)
T ss_pred HHHHHhCCCEEEEEecCchhhhhcc------cc---hhhHHHHH--HHHHHHHhhCCEEEECCHHHHHHHHHcCC-----
Confidence 6677889999999998654332111 00 01111111 12455688999999999988777644321
Q ss_pred HHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhc-cCCCC
Q 001492 402 LEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFL-TNPHK 480 (1067)
Q Consensus 402 l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 480 (1067)
.+..++.+||||+|.+.|.+..... ....++. ..+++
T Consensus 226 -----------------~~~~kv~vi~nGvd~~~f~p~~~~~-------------------------~~~~~~~~~~~~~ 263 (465)
T PLN02871 226 -----------------TAANRIRVWNKGVDSESFHPRFRSE-------------------------EMRARLSGGEPEK 263 (465)
T ss_pred -----------------CCcCeEEEeCCccCccccCCccccH-------------------------HHHHHhcCCCCCC
Confidence 1123899999999999887643100 0011111 23467
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCC
Q 001492 481 PMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQ 559 (1067)
Q Consensus 481 ~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~ 559 (1067)
++|+++||+.+.||++.+++++..+ +++.| |+|+++.. ..+.+++.. .+|.|+|+++.
T Consensus 264 ~~i~~vGrl~~~K~~~~li~a~~~~------~~~~l~ivG~G~~~-----------~~l~~~~~~----~~V~f~G~v~~ 322 (465)
T PLN02871 264 PLIVYVGRLGAEKNLDFLKRVMERL------PGARLAFVGDGPYR-----------EELEKMFAG----TPTVFTGMLQG 322 (465)
T ss_pred eEEEEeCCCchhhhHHHHHHHHHhC------CCcEEEEEeCChHH-----------HHHHHHhcc----CCeEEeccCCH
Confidence 8999999999999999999999876 34554 88987643 334444443 36999999999
Q ss_pred CCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhcc---CCceEEeCCCCHHHHHHHHHHhh
Q 001492 560 YDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRA---LNNGLLVDPHDQQAIADALLKLV 636 (1067)
Q Consensus 560 ~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~---~~~Gllv~p~d~~~la~aL~~ll 636 (1067)
++++.+|+.| |+||+||..|+||++++||||||+|||+++.||..|++.+ +.+|++++|+|+++++++|.+++
T Consensus 323 ~ev~~~~~~a----Dv~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll 398 (465)
T PLN02871 323 DELSQAYASG----DVFVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLL 398 (465)
T ss_pred HHHHHHHHHC----CEEEECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHH
Confidence 9999999999 9999999999999999999999999999999999999998 89999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHcCCHHHHHHHHHH-HHHHhHhcC
Q 001492 637 SEKNLWVECRKNGWKNIHLFSWPEHCRTYLT-RVAACRMRH 676 (1067)
Q Consensus 637 ~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~-~~~~~~~~~ 676 (1067)
++++.++++++++++.++.|||+.+++++++ .|.++....
T Consensus 399 ~~~~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~~ 439 (465)
T PLN02871 399 ADPELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWFW 439 (465)
T ss_pred hCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998 698887753
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-38 Score=377.25 Aligned_cols=446 Identities=20% Similarity=0.201 Sum_probs=287.1
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCc-CCCccc---c-cCCCC
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWS-YGEPAE---M-LTGGP 240 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~-y~~~~e---~-l~~~~ 240 (1067)
|||++||.... |. ..+||+..++..|+++|+++| |+|.|+|+.+..-...+. ..+... . +....
T Consensus 1 m~i~~vs~E~~----P~-----~k~GGl~~~v~~L~~aL~~~G--~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (473)
T TIGR02095 1 MRVLFVAAEMA----PF-----AKTGGLADVVGALPKALAALG--HDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRT 69 (473)
T ss_pred CeEEEEEeccc----cc-----cCcCcHHHHHHHHHHHHHHcC--CeEEEEecCCcChhhhhccCeEEEEEEEEeecCce
Confidence 89999997764 21 459999999999999999999 999999987643111100 000000 0 00000
Q ss_pred CCCCccccccCCeEEEeccCCCCccCccc-ccccc--hhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchh
Q 001492 241 EDDGIEVGESSGAYIIRIPFGPRDKYLRK-ELLWP--YIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAG 317 (1067)
Q Consensus 241 ~~~~~~~~~~~gv~i~ri~~~~~~~~l~k-~~l~~--~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~ 317 (1067)
..+..-....+|+.++++..... ..+ ..+.. +...+.. +. .+.++..+.+.. ...+|||||+|+|.++
T Consensus 70 ~~~~~~~~~~~~v~~~~i~~~~~---~~r~~~~y~~~~~d~~~r-~~----~f~~a~~~~~~~-~~~~~DiiH~hdw~~~ 140 (473)
T TIGR02095 70 LYVKVFEGVVEGVPVYFIDNPSL---FDRPGGIYGDDYPDNAER-FA----FFSRAAAELLSG-LGWQPDVVHAHDWHTA 140 (473)
T ss_pred eEEEEEEEEECCceEEEEECHHH---cCCCCCCCCCCCCCHHHH-HH----HHHHHHHHHHHh-cCCCCCEEEECCcHHH
Confidence 00001112346788888865321 111 11211 1111110 10 111111111111 1257999999999999
Q ss_pred HHHHHHHhcCC---CcEEEEeCCCchhh-H-HHHHhhCCCChhhh-hhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHH
Q 001492 318 DSAALLSGALN---VPMVLTGHSLGRNK-L-EQLLKQGRQSKEDI-NSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQ 391 (1067)
Q Consensus 318 ~~a~~l~~~~g---iP~V~t~H~l~~~~-~-~~l~~~g~~~~~~i-~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~ 391 (1067)
.++.+++..++ +|+|+|+|++.... + ...+....+..... ...+....++..++.++..||.|+++|+...+++
T Consensus 141 ~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei 220 (473)
T TIGR02095 141 LVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAREI 220 (473)
T ss_pred HHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHHHHh
Confidence 98888887776 99999999975321 0 00111100110000 0011111134446778999999999999988876
Q ss_pred HhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhh
Q 001492 392 WGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDV 471 (1067)
Q Consensus 392 ~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (1067)
.....++. +...++ .+..++.+||||||.+.|.|... + .+...+.......+ .......+
T Consensus 221 ~~~~~~~~--l~~~l~-----------~~~~ki~~I~NGid~~~~~p~~~-~----~~~~~~~~~~~~~k--~~~k~~l~ 280 (473)
T TIGR02095 221 LTPEFGYG--LDGVLK-----------ARSGKLRGILNGIDTEVWNPATD-P----YLKANYSADDLAGK--AENKEALQ 280 (473)
T ss_pred cCCcCCcc--chhHHH-----------hcCCCeEEEeCCCCccccCCCCC-c----ccccCcCccchhhh--hhhHHHHH
Confidence 54321111 111111 12248999999999999987531 1 11110000000000 00011123
Q ss_pred hhhccCC--CCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCChhhhhccchHHHHHHHHHHHhcCCC
Q 001492 472 MRFLTNP--HKPMILALSRPDPKKNITTLLKAFGECRPLRELANLT-LIMGNRDDIEEMSSGNASVLITVLKLIDKYDLY 548 (1067)
Q Consensus 472 ~~~~~~~--~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~-lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~ 548 (1067)
.++..+. ++++|+++||+.+.||++.+++|+.++.+ . ++. +|+|+++. ++...+..++.+++
T Consensus 281 ~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~--~~~lvi~G~g~~---------~~~~~l~~~~~~~~-- 345 (473)
T TIGR02095 281 EELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLE--L--GGQLVVLGTGDP---------ELEEALRELAERYP-- 345 (473)
T ss_pred HHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHH--c--CcEEEEECCCCH---------HHHHHHHHHHHHCC--
Confidence 3344433 78999999999999999999999999853 2 244 47888751 22345666666654
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccC------CceEEeCC
Q 001492 549 GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRAL------NNGLLVDP 622 (1067)
Q Consensus 549 ~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~------~~Gllv~p 622 (1067)
.++.|.+.++.+++..+|+.| |++|+||.+||||++++|||+||+|||+++.||..|+|.++ .+|++++|
T Consensus 346 ~~v~~~~~~~~~~~~~~~~~a----Dv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~ 421 (473)
T TIGR02095 346 GNVRVIIGYDEALAHLIYAGA----DFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEE 421 (473)
T ss_pred CcEEEEEcCCHHHHHHHHHhC----CEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCC
Confidence 568888777778889999999 99999999999999999999999999999999999999988 89999999
Q ss_pred CCHHHHHHHHHHhhc----CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Q 001492 623 HDQQAIADALLKLVS----EKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 623 ~d~~~la~aL~~ll~----d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~ 672 (1067)
.|+++++++|.+++. +++.++++++++++ +.|||+.++++|+++|+++
T Consensus 422 ~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 422 YDPGALLAALSRALRLYRQDPSLWEALQKNAMS--QDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhc--cCCCcHHHHHHHHHHHHhC
Confidence 999999999999988 99999999988863 5899999999999999863
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=364.50 Aligned_cols=366 Identities=20% Similarity=0.217 Sum_probs=271.3
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
||++|+.... |..||.++++.+|+++|+++| |+|+|+|+....+. + .
T Consensus 1 kI~~v~~~~~-----------p~~GG~e~~~~~la~~L~~~G--~~V~v~~~~~~~~~-----~--~------------- 47 (398)
T cd03796 1 RICMVSDFFY-----------PNLGGVETHIYQLSQCLIKRG--HKVVVITHAYGNRV-----G--I------------- 47 (398)
T ss_pred CeeEEeeccc-----------cccccHHHHHHHHHHHHHHcC--CeeEEEeccCCcCC-----C--c-------------
Confidence 6899986665 779999999999999999999 99999997531110 0 0
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCch--hHHHHHHH
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADA--GDSAALLS 324 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a--~~~a~~l~ 324 (1067)
....+++.++++|..+. .+....+....+ +..+.+ .+.+ .+|||||+|.... ...+.+++
T Consensus 48 ~~~~~~i~v~~~p~~~~----~~~~~~~~~~~~----~~~l~~---~~~~-------~~~DiIh~~~~~~~~~~~~~~~~ 109 (398)
T cd03796 48 RYLTNGLKVYYLPFVVF----YNQSTLPTFFGT----FPLLRN---ILIR-------ERITIVHGHQAFSALAHEALLHA 109 (398)
T ss_pred ccccCceeEEEecceec----cCCccccchhhh----HHHHHH---HHHh-------cCCCEEEECCCCchHHHHHHHHh
Confidence 01135788888886332 111111111111 111111 1111 5699999998643 33466678
Q ss_pred hcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHH
Q 001492 325 GALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEK 404 (1067)
Q Consensus 325 ~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~ 404 (1067)
+..++|+|+|.|+++.... . . .....+ .++..++.+|.++++|+...+.+.... ..
T Consensus 110 ~~~~~~~v~t~h~~~~~~~--~------~-------~~~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~-~~------ 165 (398)
T cd03796 110 RTMGLKTVFTDHSLFGFAD--A------S-------SIHTNK--LLRFSLADVDHVICVSHTSKENTVLRA-SL------ 165 (398)
T ss_pred hhcCCcEEEEecccccccc--h------h-------hHHhhH--HHHHhhccCCEEEEecHhHhhHHHHHh-CC------
Confidence 8889999999998642110 0 0 000111 134567899999999997665432211 11
Q ss_pred HHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEE
Q 001492 405 VLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMIL 484 (1067)
Q Consensus 405 ~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il 484 (1067)
+..++.+||||+|.+.|.+... ...+++++|+
T Consensus 166 ---------------~~~k~~vi~ngvd~~~f~~~~~---------------------------------~~~~~~~~i~ 197 (398)
T cd03796 166 ---------------DPERVSVIPNAVDSSDFTPDPS---------------------------------KRDNDKITIV 197 (398)
T ss_pred ---------------ChhhEEEEcCccCHHHcCCCcc---------------------------------cCCCCceEEE
Confidence 1238999999999988865431 0125678999
Q ss_pred EEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHH
Q 001492 485 ALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVP 563 (1067)
Q Consensus 485 ~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~ 563 (1067)
++||+.+.||++.+++|+..+. +..+++.+ |+|+++. ...+.++++++++.++|.|+|+++.+++.
T Consensus 198 ~~grl~~~Kg~~~li~a~~~l~--~~~~~~~l~i~G~g~~-----------~~~l~~~~~~~~l~~~v~~~G~~~~~~~~ 264 (398)
T cd03796 198 VISRLVYRKGIDLLVGIIPEIC--KKHPNVRFIIGGDGPK-----------RILLEEMREKYNLQDRVELLGAVPHERVR 264 (398)
T ss_pred EEeccchhcCHHHHHHHHHHHH--hhCCCEEEEEEeCCch-----------HHHHHHHHHHhCCCCeEEEeCCCCHHHHH
Confidence 9999999999999999999884 34567776 8888763 34567888899999999999999999999
Q ss_pred HHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHH
Q 001492 564 EIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWV 643 (1067)
Q Consensus 564 ~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~ 643 (1067)
.+|+.| |++|+||..|+||++++||||||+|||+|+.||..|++.++ .+++++ .|.++++++|.++++++....
T Consensus 265 ~~l~~a----d~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~-~~~~~~-~~~~~l~~~l~~~l~~~~~~~ 338 (398)
T cd03796 265 DVLVQG----HIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPD-MILLAE-PDVESIVRKLEEAISILRTGK 338 (398)
T ss_pred HHHHhC----CEEEeCChhhccCHHHHHHHHcCCCEEECCCCCchhheeCC-ceeecC-CCHHHHHHHHHHHHhChhhhh
Confidence 999999 99999999999999999999999999999999999999765 455555 489999999999999887776
Q ss_pred HHHHHHHHHH-HcCCHHHHHHHHHHHHHHhHh
Q 001492 644 ECRKNGWKNI-HLFSWPEHCRTYLTRVAACRM 674 (1067)
Q Consensus 644 ~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~~~ 674 (1067)
.+.+++++.+ ++|||+..+++|+++|++++.
T Consensus 339 ~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~ 370 (398)
T cd03796 339 HDPWSFHNRVKKMYSWEDVAKRTEKVYDRILQ 370 (398)
T ss_pred hHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhc
Confidence 7788888887 599999999999999999875
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-41 Score=381.91 Aligned_cols=477 Identities=33% Similarity=0.433 Sum_probs=358.1
Q ss_pred hhhhhhcccCCCcCCCcccccCCC------CCcccccccccccccccccccCCCc-eEEEEEecccccccCCcCCCCCCC
Q 001492 117 VTEDMSEDLSEGEKGDGVGEIQTP------DTPRKKFQRNFSNLEVWSDDKKEKK-LYIVLISLHGLVRGENMELGRDSD 189 (1067)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~-m~I~lIs~~~~~~~~~~~~g~~~~ 189 (1067)
++.|+++++++++|.......... ..++-+...+...+..|..+.+.-. +.+++. |.+ ++| +||
T Consensus 1 ~~~~~~~~~~~~qk~~~~~m~~~~~~~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s-------~~~-~lg-~~d 71 (495)
T KOG0853|consen 1 MTNDSSSNISELQKVLWKAMIEKSLLVSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS-------GQD-VLG-LPD 71 (495)
T ss_pred CcchhhhHHHHhhhhhhhhhhhhhcccccccccchhheeeccccccCchHHHhHHHHHHHHh-------ccc-ccC-CCC
Confidence 356788888888888755544322 2233445555557788876664322 333322 668 899 899
Q ss_pred CChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCccc
Q 001492 190 TGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRK 269 (1067)
Q Consensus 190 ~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k 269 (1067)
+||+.+|++..+++|. +++++++...|++...+.....+..|.++. ...+....+.+++++++|+++..++.
T Consensus 72 ~G~qV~~l~~h~~al~-~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~-----~~~~~~~~~~~~~il~~~~~~~~k~~-- 143 (495)
T KOG0853|consen 72 TGGQVVYLTSHEDALE-MPLLLRCFAETLDGTPPILVVGDWLPRAMG-----QFLEQVAGCAYLRILRIPFGILFKWA-- 143 (495)
T ss_pred CCceEEEEehhhhhhc-chHHHHHHHHHhcCCCceEEEEeecCcccc-----hhhhhhhccceeEEEEeccchhhhhh--
Confidence 9999999999999997 666666666665544443333344444331 01233556789999999998875555
Q ss_pred ccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhh
Q 001492 270 ELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQ 349 (1067)
Q Consensus 270 ~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~ 349 (1067)
+.+||++..|+.. .. .+.++++ . ||++|.++++....+.++++++|++.+++.|.++..+.++...+
T Consensus 144 ~~~d~~i~d~~~~-~~-------~l~~~~~----~-p~~~~~i~~~~h~~~~lla~r~g~~~~l~~~~l~~~e~e~~~~~ 210 (495)
T KOG0853|consen 144 EKVDPIIEDFVSA-CV-------PLLKQLS----G-PDVIIKIYFYCHFPDSLLAKRLGVLKVLYRHALDKIEEETTGLA 210 (495)
T ss_pred hhhceeecchHHH-HH-------HHHHHhc----C-CcccceeEEeccchHHHhccccCccceeehhhhhhhhhhhhhcc
Confidence 7789999988842 22 2333333 2 99999999999999999999999999999999999998887665
Q ss_pred CCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCC
Q 001492 350 GRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPP 429 (1067)
Q Consensus 350 g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPn 429 (1067)
++. +...|.+.+++.++...+..+| ++++.+++..+|..|+.|...++..+..|..+|+++.+++++++..|++
T Consensus 211 ~~~----~~ns~~~~~~f~~~~~~L~~~d--~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~~d~~~~siN~~~p 284 (495)
T KOG0853|consen 211 WKI----LVNSYFTKRQFKATFVSLSNSD--ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSGIDRFFPSINRFEP 284 (495)
T ss_pred ceE----ecchhhhhhhhhhhhhhcCCCC--cceeeccccchhccccccccchhcccccceeeeecccceEeeeeeecCC
Confidence 543 6678999999999999999999 8899999999999999888887777777777777777777777777777
Q ss_pred CCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhccccc
Q 001492 430 GMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLR 509 (1067)
Q Consensus 430 GiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~ 509 (1067)
|.|...+. +||..+...-
T Consensus 285 gkd~~l~l--------------------------------------------------------------~a~~~~~~~i 302 (495)
T KOG0853|consen 285 GKDQDLAL--------------------------------------------------------------PAFTLLHDSI 302 (495)
T ss_pred CCCceeeh--------------------------------------------------------------hhHHhhhccc
Confidence 66665443 2333332111
Q ss_pred ---CCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCC-CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCC
Q 001492 510 ---ELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLY-GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEP 584 (1067)
Q Consensus 510 ---~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~-~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~Eg 584 (1067)
..+...+ ++|++ .+++..+++.+++.++.+++++++++ ..|.|..++++.+. |+.++.++.+|+.|+. |.
T Consensus 303 ~~~~~~~~hl~~~g~~-G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~---yrl~adt~~v~~qPa~-E~ 377 (495)
T KOG0853|consen 303 PEPSISSEHLVVAGSR-GYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAK---YRLAADTKGVLYQPAN-EH 377 (495)
T ss_pred CCCCCCceEEEEecCC-CccccchhhHHHHHHHHHHHHHhCccCceEEEecCCchHHH---HHHHHhcceEEecCCC-CC
Confidence 1233444 55533 26677788899999999999999996 45566677665554 7777788899999988 99
Q ss_pred CCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHH---HHHHHHHHhhcCHHHHHHHHHHHHHHHH-cCCHHH
Q 001492 585 FGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQ---AIADALLKLVSEKNLWVECRKNGWKNIH-LFSWPE 660 (1067)
Q Consensus 585 fgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~---~la~aL~~ll~d~~~~~~~~~~~~~~~~-~fsw~~ 660 (1067)
||+|.+||||||+|||||++|||.|+|.++.+|++++| +.+ .+|++|.++..||++|.+|+++|+++++ .|||
T Consensus 378 FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~a~~~~kl~~~p~l~~~~~~~G~~rV~e~fs~-- 454 (495)
T KOG0853|consen 378 FGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAELADALLKLRRDPELWARMGKNGLKRVKEMFSW-- 454 (495)
T ss_pred ccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhH--
Confidence 99999999999999999999999999999999999999 677 5999999999999999999999999996 6999
Q ss_pred HHHHHHHHHHHhHhcCCCCCCCCcchhhhhhhcccccchhhhhhhccccccC
Q 001492 661 HCRTYLTRVAACRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMSLRLSVD 712 (1067)
Q Consensus 661 ~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~d~~~~~~~~~~~ 712 (1067)
+.|.+.+..++.+.++|+... ..+++.|++++++.+++.
T Consensus 455 --~~~~~ri~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~ 493 (495)
T KOG0853|consen 455 --QHYSERIASVLGKYLQWEKVS-----------SLDSLEDRRYISLFYALS 493 (495)
T ss_pred --HHHHHHHHHHhHhcCCccccc-----------ccccccccccHHHHHHhh
Confidence 555555566666777766432 367888999998665543
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-37 Score=358.20 Aligned_cols=377 Identities=22% Similarity=0.275 Sum_probs=271.8
Q ss_pred eEEEEEecccccccCCcCCCCCCC-CChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCC
Q 001492 166 LYIVLISLHGLVRGENMELGRDSD-TGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDG 244 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~-~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~ 244 (1067)
|||++|+.... |+ .||.++++.+|+++|.+. |+|+|+|.... .
T Consensus 1 mkI~~i~~~~~-----------p~~~GG~~~~v~~l~~~l~~~---~~v~v~~~~~~--~-------------------- 44 (388)
T TIGR02149 1 MKVTVLTREYP-----------PNVYGGAGVHVEELTRELARL---MDVDVRCFGDQ--R-------------------- 44 (388)
T ss_pred CeeEEEecccC-----------ccccccHhHHHHHHHHHHHHh---cCeeEEcCCCc--h--------------------
Confidence 79999986543 55 499999999999999886 56777765321 0
Q ss_pred ccccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHH
Q 001492 245 IEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLS 324 (1067)
Q Consensus 245 ~~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~ 324 (1067)
....++.+++++.... .......+..+... +.. . . ...+|||||+|.+.++..+.+++
T Consensus 45 ---~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~----~~~---~-~------~~~~~divh~~~~~~~~~~~~~~ 102 (388)
T TIGR02149 45 ---FDSEGLTVKGYRPWSE-----LKEANKALGTFSVD----LAM---A-N------DPVDADVVHSHTWYTFLAGHLAK 102 (388)
T ss_pred ---hcCCCeEEEEecChhh-----ccchhhhhhhhhHH----HHH---h-h------CCCCCCeEeecchhhhhHHHHHH
Confidence 0123677776653111 00111111111000 000 0 0 11359999999987777677777
Q ss_pred hcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHH
Q 001492 325 GALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEK 404 (1067)
Q Consensus 325 ~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~ 404 (1067)
+..++|+|+|.|++.+.... ........+.+..+ .++.++..+|.|+++|+...+.+.+.|.+..+
T Consensus 103 ~~~~~p~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~--~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~---- 168 (388)
T TIGR02149 103 KLYDKPLVVTAHSLEPLRPW--------KEEQLGGGYKLSSW--AEKTAIEAADRVIAVSGGMREDILKYYPDLDP---- 168 (388)
T ss_pred HhcCCCEEEEeecccccccc--------cccccccchhHHHH--HHHHHHhhCCEEEEccHHHHHHHHHHcCCCCc----
Confidence 77899999999997542210 00000111223333 36678899999999999887776555533222
Q ss_pred HHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEE
Q 001492 405 VLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMIL 484 (1067)
Q Consensus 405 ~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il 484 (1067)
.++.+||||+|...|.+... ...+.++..++++++|+
T Consensus 169 -----------------~~i~vi~ng~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~i~ 205 (388)
T TIGR02149 169 -----------------EKVHVIYNGIDTKEYKPDDG--------------------------NVVLDRYGIDRSRPYIL 205 (388)
T ss_pred -----------------ceEEEecCCCChhhcCCCch--------------------------HHHHHHhCCCCCceEEE
Confidence 38999999999988764320 11223344456788999
Q ss_pred EEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCC-CCcEEe-CCCCCCCCH
Q 001492 485 ALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDL-YGQVAY-PKHHKQYDV 562 (1067)
Q Consensus 485 ~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l-~~~V~~-~g~~~~~dl 562 (1067)
++||+.+.||++.+++|+.++. ....+ +++|++++. .++...+.+.+..++. .++|.| .+.++.+++
T Consensus 206 ~~Grl~~~Kg~~~li~a~~~l~---~~~~l-~i~g~g~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 274 (388)
T TIGR02149 206 FVGRITRQKGVPHLLDAVHYIP---KDVQV-VLCAGAPDT-------PEVAEEVRQAVALLDRNRTGIIWINKMLPKEEL 274 (388)
T ss_pred EEcccccccCHHHHHHHHHHHh---hcCcE-EEEeCCCCc-------HHHHHHHHHHHHHhccccCceEEecCCCCHHHH
Confidence 9999999999999999999884 22223 355655432 2234566666666655 234655 578899999
Q ss_pred HHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCH------HHHHHHHHHhh
Q 001492 563 PEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQ------QAIADALLKLV 636 (1067)
Q Consensus 563 ~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~------~~la~aL~~ll 636 (1067)
..+|+.| |++|+||..|+||++++||||||+|||+|+.||..|++.++.+|+++++.|. ++++++|.+++
T Consensus 275 ~~~~~~a----Dv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~ 350 (388)
T TIGR02149 275 VELLSNA----EVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILL 350 (388)
T ss_pred HHHHHhC----CEEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHH
Confidence 9999999 9999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred cCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHh
Q 001492 637 SEKNLWVECRKNGWKNI-HLFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 637 ~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~ 672 (1067)
++++.++++++++++.+ ++|||+.++++|.++|+++
T Consensus 351 ~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 351 ADPELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred hCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 99999999999999998 5999999999999999875
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=363.63 Aligned_cols=450 Identities=19% Similarity=0.172 Sum_probs=281.2
Q ss_pred CceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCc--ccccCCCCC
Q 001492 164 KKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEP--AEMLTGGPE 241 (1067)
Q Consensus 164 ~~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~--~e~l~~~~~ 241 (1067)
.+|||++|+.... |+ ..+||..-.+..|.++|+++| |+|.|+++.+..- ....... ...+.....
T Consensus 2 ~~~~il~v~~E~~----p~-----~k~ggl~dv~~~lp~~l~~~g--~~v~v~~P~y~~~--~~~~~~~~~~~~~~~~~~ 68 (485)
T PRK14099 2 TPLRVLSVASEIF----PL-----IKTGGLADVAGALPAALKAHG--VEVRTLVPGYPAV--LAGIEDAEQVHSFPDLFG 68 (485)
T ss_pred CCcEEEEEEeccc----cc-----cCCCcHHHHHHHHHHHHHHCC--CcEEEEeCCCcch--hhhhcCceEEEEEeeeCC
Confidence 3599999997665 33 689999999999999999999 9999999976431 1000000 000000000
Q ss_pred -CCCccccccCCeEEEeccCCCCccCcccc-cccch--hHHHHHHHHHHHHHHhHHHHhhhcCC-CCCCceEEEEcCCch
Q 001492 242 -DDGIEVGESSGAYIIRIPFGPRDKYLRKE-LLWPY--IQEFVDGALAHCLNMSKVLGEQIGGG-QPVWPYVIHGHYADA 316 (1067)
Q Consensus 242 -~~~~~~~~~~gv~i~ri~~~~~~~~l~k~-~l~~~--l~~f~~~~l~~~~~~~~~L~~~~~~~-~~~~pDvIh~h~~~a 316 (1067)
.+..-....+|+.++.+.... |..+. .+... -..+.+...++.. +.++..+..... ...+|||||+|.|.+
T Consensus 69 ~~~~~~~~~~~~v~~~~~~~~~---~f~r~~~~y~~~~~~~~~d~~~rf~~-f~~a~~~~~~~~~~~~~pDIiH~Hdw~~ 144 (485)
T PRK14099 69 GPARLLAARAGGLDLFVLDAPH---LYDRPGNPYVGPDGKDWPDNAQRFAA-LARAAAAIGQGLVPGFVPDIVHAHDWQA 144 (485)
T ss_pred ceEEEEEEEeCCceEEEEeChH---hhCCCCCCCCCccCCCCCcHHHHHHH-HHHHHHHHHhhhccCCCCCEEEECCcHH
Confidence 000001112456555553211 11111 01100 0001122222111 111211211111 125799999999988
Q ss_pred hHHHHHHHh--cCCCcEEEEeCCCchhh-H--HHHHhhCCCChhhhh-hHhHHHHhHHHhhcccccCCEEEeCCHHHHHH
Q 001492 317 GDSAALLSG--ALNVPMVLTGHSLGRNK-L--EQLLKQGRQSKEDIN-STYKIMRRIEGEELSLDAAELVITSTKQEIDE 390 (1067)
Q Consensus 317 ~~~a~~l~~--~~giP~V~t~H~l~~~~-~--~~l~~~g~~~~~~i~-~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~ 390 (1067)
+.++.++.. ..++|+|+|+|++.... + ..+...|. ...... ....+...+...+.++..||.|+|+|+...++
T Consensus 145 ~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a~e 223 (485)
T PRK14099 145 GLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGL-PPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYALE 223 (485)
T ss_pred HHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCC-ChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHHHH
Confidence 888877653 34689999999974321 1 11111111 111000 00111122233566789999999999998887
Q ss_pred HHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcch-hhH
Q 001492 391 QWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPA-IWS 469 (1067)
Q Consensus 391 ~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 469 (1067)
+...+.+.. +...| ..+..++.+||||||++.|.|... ..+...+...+. ..... ...
T Consensus 224 i~~~~~g~g--l~~~l-----------~~~~~ki~vI~NGID~~~f~p~~~-----~~~~~~~~~~~~---~~k~~~k~~ 282 (485)
T PRK14099 224 IQGPEAGMG--LDGLL-----------RQRADRLSGILNGIDTAVWNPATD-----ELIAATYDVETL---AARAANKAA 282 (485)
T ss_pred HhcccCCcC--hHHHH-----------HhhCCCeEEEecCCchhhcccccc-----chhhhcCChhHH---HhHHHhHHH
Confidence 754432211 00111 112348999999999999987542 011000000000 00000 011
Q ss_pred hhhhhccC--CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCChhhhhccchHHHHHHHHHHHhcC
Q 001492 470 DVMRFLTN--PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLT-LIMGNRDDIEEMSSGNASVLITVLKLIDKYD 546 (1067)
Q Consensus 470 ~~~~~~~~--~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~-lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~ 546 (1067)
.++++..+ ++.++|+++||+.+.||++.+++|+..+.+ . ++. +|+|+++. ++...+..++.++.
T Consensus 283 l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~--~~~lvivG~G~~---------~~~~~l~~l~~~~~ 349 (485)
T PRK14099 283 LQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLG--E--GAQLALLGSGDA---------ELEARFRAAAQAYP 349 (485)
T ss_pred HHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHh--c--CcEEEEEecCCH---------HHHHHHHHHHHHCC
Confidence 22334443 357899999999999999999999998842 2 344 47788752 23345666666654
Q ss_pred CCCcE-EeCCCCCCCCHHHHHH-HhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccC---------C
Q 001492 547 LYGQV-AYPKHHKQYDVPEIYR-LAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRAL---------N 615 (1067)
Q Consensus 547 l~~~V-~~~g~~~~~dl~~ly~-~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~---------~ 615 (1067)
+++ .|.|+ .++++.+|. .| |+||+||.+||||++++||||||+|+|++++||+.|+|.++ .
T Consensus 350 --~~v~~~~G~--~~~l~~~~~a~a----Difv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~ 421 (485)
T PRK14099 350 --GQIGVVIGY--DEALAHLIQAGA----DALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVA 421 (485)
T ss_pred --CCEEEEeCC--CHHHHHHHHhcC----CEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCC
Confidence 345 68898 688999875 57 99999999999999999999999988889999999998775 5
Q ss_pred ceEEeCCCCHHHHHHHHHH---hhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhc
Q 001492 616 NGLLVDPHDQQAIADALLK---LVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRMR 675 (1067)
Q Consensus 616 ~Gllv~p~d~~~la~aL~~---ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~ 675 (1067)
+|++|+|.|+++++++|.+ +++|++.|++++++++. +.|||+..+++|+++|++++..
T Consensus 422 ~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~~--~~fSw~~~a~~y~~lY~~l~~~ 482 (485)
T PRK14099 422 TGVQFSPVTADALAAALRKTAALFADPVAWRRLQRNGMT--TDVSWRNPAQHYAALYRSLVAE 482 (485)
T ss_pred ceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhhh--hcCChHHHHHHHHHHHHHHHhh
Confidence 8999999999999999997 67799999999999873 6899999999999999998754
|
|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=363.48 Aligned_cols=451 Identities=15% Similarity=0.145 Sum_probs=284.5
Q ss_pred ceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCC-CcCCCc--ccccC-CCC
Q 001492 165 KLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVD-WSYGEP--AEMLT-GGP 240 (1067)
Q Consensus 165 ~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~-~~y~~~--~e~l~-~~~ 240 (1067)
.|||++|+.... |+ ..+||..-.+..|.++|+++| |+|.|+++.+..-... +..... ...+. +..
T Consensus 5 ~~~il~v~~E~~----p~-----~k~Ggl~dv~~~Lp~al~~~g--~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~ 73 (489)
T PRK14098 5 NFKVLYVSGEVS----PF-----VRVSALADFMASFPQALEEEG--FEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLK 73 (489)
T ss_pred CcEEEEEeecch----hh-----cccchHHHHHHHHHHHHHHCC--CeEEEEcCCCCchhhhhhccccceEEEEEEEeec
Confidence 399999997665 33 679999999999999999999 9999999876331100 000000 00000 000
Q ss_pred CCCC-ccc--ccc--CCeEEEeccCCCCccCcccccccchh---HHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEc
Q 001492 241 EDDG-IEV--GES--SGAYIIRIPFGPRDKYLRKELLWPYI---QEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGH 312 (1067)
Q Consensus 241 ~~~~-~~~--~~~--~gv~i~ri~~~~~~~~l~k~~l~~~l---~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h 312 (1067)
..+. ..+ ... .++.++.+... .|..+..+..+- ..+.+...+... +.++..+.+.. ...+|||||+|
T Consensus 74 ~~~~~~~~~~~~~~~~~v~~~~~~~~---~~f~r~~~y~~~~~g~~~~d~~~rf~~-f~~a~l~~~~~-~~~~pDiiH~h 148 (489)
T PRK14098 74 EKTDLLHVKVTALPSSKIQTYFLYNE---KYFKRNGLFTDMSLGGDLKGSAEKVIF-FNVGVLETLQR-LGWKPDIIHCH 148 (489)
T ss_pred CeeEEEEEEEecccCCCceEEEEeCH---HHcCCCCcCCCCccCCCCCcHHHHHHH-HHHHHHHHHHh-cCCCCCEEEec
Confidence 0000 000 001 23444444321 111222111100 001122222111 11111121211 12579999999
Q ss_pred CCchhHHHHHHHhcC-------CCcEEEEeCCCchhhHH--HHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeC
Q 001492 313 YADAGDSAALLSGAL-------NVPMVLTGHSLGRNKLE--QLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITS 383 (1067)
Q Consensus 313 ~~~a~~~a~~l~~~~-------giP~V~t~H~l~~~~~~--~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~ 383 (1067)
+|.++.++.+++... ++|+|+|+|++...... ..+.. .++.............+...+.++..||.|+|+
T Consensus 149 dw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~-~~~~~~~~~~~~~~~~~n~lk~~i~~ad~VitV 227 (489)
T PRK14098 149 DWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQK-LLPEEVCSGLHREGDEVNMLYTGVEHADLLTTT 227 (489)
T ss_pred CcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHH-hCCHHhhhhhhhcCCcccHHHHHHHhcCcceee
Confidence 998888888887543 79999999997432100 00000 011110000001112234456788999999999
Q ss_pred CHHHHHHHHhh-cCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCC
Q 001492 384 TKQEIDEQWGL-YDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPK 462 (1067)
Q Consensus 384 S~~~~~~~~~~-y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1067)
|+...+++... ..++ .+...|+. ...++.+||||||++.|.|... ..+...++..+...+.
T Consensus 228 S~~~a~ei~~~~~~~~--gl~~~l~~-----------~~~kl~~I~NGID~~~~~p~~d-----~~~~~~~~~~~~~~k~ 289 (489)
T PRK14098 228 SPRYAEEIAGDGEEAF--GLDKVLEE-----------RKMRLHGILNGIDTRQWNPSTD-----KLIKKRYSIERLDGKL 289 (489)
T ss_pred CHHHHHHhCcCCCCCc--ChHHHHHh-----------cCCCeeEEeCCccccccCCccc-----ccccccCCcchhhhHH
Confidence 99999887542 1111 12222221 1248999999999999987542 1111111000000000
Q ss_pred CcchhhHhhhhhcc--CCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHH
Q 001492 463 AIPAIWSDVMRFLT--NPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVL 539 (1067)
Q Consensus 463 ~~~~~~~~~~~~~~--~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~ 539 (1067)
......++++.. .++.++|+++||+.+.||++.+++|+..+.+ .++.+ |+|+++. .+...+.
T Consensus 290 --~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~----~~~~lvivG~G~~---------~~~~~l~ 354 (489)
T PRK14098 290 --ENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE----LDIQLVICGSGDK---------EYEKRFQ 354 (489)
T ss_pred --HHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh----cCcEEEEEeCCCH---------HHHHHHH
Confidence 000112223333 3467899999999999999999999999853 24554 7888752 2345667
Q ss_pred HHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhcc----CC
Q 001492 540 KLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRA----LN 615 (1067)
Q Consensus 540 ~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~----~~ 615 (1067)
.++.+++ ++|.|.+.++.+++..+|+.| |+||+||.+|+||++.+|||+||+|+|+++.||..|++.+ +.
T Consensus 355 ~l~~~~~--~~V~~~g~~~~~~~~~~~a~a----Di~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~ 428 (489)
T PRK14098 355 DFAEEHP--EQVSVQTEFTDAFFHLAIAGL----DMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKG 428 (489)
T ss_pred HHHHHCC--CCEEEEEecCHHHHHHHHHhC----CEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCC
Confidence 7777763 689999999888899999999 9999999999999999999999999999999999998864 67
Q ss_pred ceEEeCCCCHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhH
Q 001492 616 NGLLVDPHDQQAIADALLKLV---SEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACR 673 (1067)
Q Consensus 616 ~Gllv~p~d~~~la~aL~~ll---~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~ 673 (1067)
+|++|++.|+++++++|.+++ .+++.|+++++++++ +.|||+..+++|+++|++++
T Consensus 429 ~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~y~~lY~~~~ 487 (489)
T PRK14098 429 SGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEAME--RDFSWKNSAEEYAQLYRELL 487 (489)
T ss_pred ceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--CCCChHHHHHHHHHHHHHHh
Confidence 999999999999999999865 588888888776642 58999999999999999876
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-35 Score=339.54 Aligned_cols=366 Identities=23% Similarity=0.317 Sum_probs=263.6
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCc
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGI 245 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1067)
|||++++ + |..||.++++.+|+++|++.| |+|+|+|.... . . .
T Consensus 1 mki~~~~---~-----------p~~gG~~~~~~~la~~L~~~G--~~v~v~~~~~~--~-~----~-------------- 43 (371)
T cd04962 1 MKIGIVC---Y-----------PTYGGSGVVATELGKALARRG--HEVHFITSSRP--F-R----L-------------- 43 (371)
T ss_pred CceeEEE---E-----------eCCCCccchHHHHHHHHHhcC--CceEEEecCCC--c-c----h--------------
Confidence 7899997 2 557999999999999999999 99999987421 0 0 0
Q ss_pred cccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHH-
Q 001492 246 EVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLS- 324 (1067)
Q Consensus 246 ~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~- 324 (1067)
....+++.+..++.... +......+. .... ..+.+.+.+ .+||+||+|++........++
T Consensus 44 -~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~~~---~~l~~~i~~-------~~~divh~~~~~~~~~~~~~~~ 104 (371)
T cd04962 44 -DEYSPNIFFHEVEVPQY----PLFQYPPYD----LALA---SKIAEVAKR-------YKLDLLHVHYAVPHAVAAYLAR 104 (371)
T ss_pred -hhhccCeEEEEeccccc----chhhcchhH----HHHH---HHHHHHHhc-------CCccEEeecccCCccHHHHHHH
Confidence 00112444443332111 100000110 0111 111222222 579999999864322222222
Q ss_pred ---hcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchH
Q 001492 325 ---GALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVK 401 (1067)
Q Consensus 325 ---~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~ 401 (1067)
+..++|+|++.|+...... +. ...++ . .++..++.+|.|++.|+...+.+...+.
T Consensus 105 ~~~~~~~~~~i~~~h~~~~~~~------~~------~~~~~---~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~----- 162 (371)
T cd04962 105 EILGKKDLPVVTTLHGTDITLV------GQ------DPSFQ---P--ATRFSIEKSDGVTAVSESLRQETYELFD----- 162 (371)
T ss_pred HhcCcCCCcEEEEEcCCccccc------cc------cccch---H--HHHHHHhhCCEEEEcCHHHHHHHHHhcC-----
Confidence 2238999999997632110 00 00111 1 1345688999999999987776644431
Q ss_pred HHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCc
Q 001492 402 LEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKP 481 (1067)
Q Consensus 402 l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (1067)
...++.+||||+|...|.+... ...+.++...++++
T Consensus 163 ------------------~~~~i~vi~n~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~ 198 (371)
T cd04962 163 ------------------ITKEIEVIPNFVDEDRFRPKPD--------------------------EALKRRLGAPEGEK 198 (371)
T ss_pred ------------------CcCCEEEecCCcCHhhcCCCch--------------------------HHHHHhcCCCCCCe
Confidence 1138999999999877654321 01112334456788
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCC
Q 001492 482 MILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYD 561 (1067)
Q Consensus 482 ~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~d 561 (1067)
+++++||+.+.||++.+++|+..+.. ..+...+++|.+++. ..+.+++.++++.++|.|+|. .++
T Consensus 199 ~il~~g~l~~~K~~~~li~a~~~l~~--~~~~~l~i~G~g~~~-----------~~~~~~~~~~~~~~~v~~~g~--~~~ 263 (371)
T cd04962 199 VLIHISNFRPVKRIDDVIRIFAKVRK--EVPARLLLVGDGPER-----------SPAERLARELGLQDDVLFLGK--QDH 263 (371)
T ss_pred EEEEecccccccCHHHHHHHHHHHHh--cCCceEEEEcCCcCH-----------HHHHHHHHHcCCCceEEEecC--ccc
Confidence 99999999999999999999998853 223333588887643 345677788888889999997 468
Q ss_pred HHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHH
Q 001492 562 VPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNL 641 (1067)
Q Consensus 562 l~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~ 641 (1067)
+..+|+.| |++|+||..|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++++++.
T Consensus 264 ~~~~~~~~----d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~~~ 339 (371)
T cd04962 264 VEELLSIA----DLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDDEL 339 (371)
T ss_pred HHHHHHhc----CEEEeCCCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCHHH
Confidence 99999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHh
Q 001492 642 WVECRKNGWKNI-HLFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 642 ~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~ 672 (1067)
+.++++++++.+ ++|||+.++++|.++|+++
T Consensus 340 ~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 340 WQEFSRAARNRAAERFDSERIVPQYEALYRRL 371 (371)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 999999999996 6999999999999999753
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=343.62 Aligned_cols=278 Identities=21% Similarity=0.256 Sum_probs=226.4
Q ss_pred CCceEEEEcCCchhHHHHHHHh--cCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEE
Q 001492 304 VWPYVIHGHYADAGDSAALLSG--ALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVI 381 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~--~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi 381 (1067)
.+||+||+|++.++..++.++. .++.|.++|.|+....... . ...|.. ..+..++.+|.|+
T Consensus 117 ~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~-~-----------~~~~~~-----~~~~~~~~ad~vv 179 (406)
T PRK15427 117 FVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSRE-V-----------LNHYTP-----EYQQLFRRGDLML 179 (406)
T ss_pred CCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccch-h-----------hhhhhH-----HHHHHHHhCCEEE
Confidence 5699999999877777777765 4556789999976322100 0 001110 1233578999999
Q ss_pred eCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCC
Q 001492 382 TSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSP 461 (1067)
Q Consensus 382 ~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1067)
++|+...+.+... +.++ .++.+||||+|.+.|.+...
T Consensus 180 ~~S~~~~~~l~~~--g~~~---------------------~ki~vi~nGvd~~~f~~~~~-------------------- 216 (406)
T PRK15427 180 PISDLWAGRLQKM--GCPP---------------------EKIAVSRMGVDMTRFSPRPV-------------------- 216 (406)
T ss_pred ECCHHHHHHHHHc--CCCH---------------------HHEEEcCCCCCHHHcCCCcc--------------------
Confidence 9999777665332 1222 38999999999998864321
Q ss_pred CCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHH
Q 001492 462 KAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLK 540 (1067)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~ 540 (1067)
....+...|+++||+.+.||++.+++|+..+. ...+++.+ |+|+++. ..++.+
T Consensus 217 -------------~~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~--~~~~~~~l~ivG~G~~-----------~~~l~~ 270 (406)
T PRK15427 217 -------------KAPATPLEIISVARLTEKKGLHVAIEACRQLK--EQGVAFRYRILGIGPW-----------ERRLRT 270 (406)
T ss_pred -------------ccCCCCeEEEEEeCcchhcCHHHHHHHHHHHH--hhCCCEEEEEEECchh-----------HHHHHH
Confidence 00123457999999999999999999999985 34567776 8898863 356778
Q ss_pred HHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCC------CCCCHHHHHHHHcCCCEEEcCCCCchhhhccC
Q 001492 541 LIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALV------EPFGLTLIEAAAHGLPMVATKNGGPVDIHRAL 614 (1067)
Q Consensus 541 l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~------EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~ 614 (1067)
++.++++.++|.|+|+++++++.++|+.| |+||+||.. ||||++++||||||+|||+|+.||..|++.++
T Consensus 271 ~~~~~~l~~~V~~~G~~~~~el~~~l~~a----Dv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~ 346 (406)
T PRK15427 271 LIEQYQLEDVVEMPGFKPSHEVKAMLDDA----DVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEAD 346 (406)
T ss_pred HHHHcCCCCeEEEeCCCCHHHHHHHHHhC----CEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCC
Confidence 89999999999999999999999999999 999999974 99999999999999999999999999999999
Q ss_pred CceEEeCCCCHHHHHHHHHHhhc-CHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHH
Q 001492 615 NNGLLVDPHDQQAIADALLKLVS-EKNLWVECRKNGWKNI-HLFSWPEHCRTYLTRVAA 671 (1067)
Q Consensus 615 ~~Gllv~p~d~~~la~aL~~ll~-d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~ 671 (1067)
.+|++++|+|+++++++|.++++ |+++++++++++++.+ ++|+|+..++++.++|++
T Consensus 347 ~~G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 347 KSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred CceEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 99999999999999999999999 9999999999999999 599999999999999875
|
|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=335.18 Aligned_cols=366 Identities=21% Similarity=0.221 Sum_probs=263.8
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
+|++|..+. +.||+++++.+|+++|.+.| |+++|++..... . +..
T Consensus 3 ~il~ii~~~-------------~~GG~e~~~~~l~~~l~~~~--~~~~v~~~~~~~-~----~~~--------------- 47 (374)
T TIGR03088 3 LIVHVVYRF-------------DVGGLENGLVNLINHLPADR--YRHAVVALTEVS-A----FRK--------------- 47 (374)
T ss_pred eEEEEeCCC-------------CCCcHHHHHHHHHhhccccc--cceEEEEcCCCC-h----hHH---------------
Confidence 688886333 37999999999999999998 999888752211 0 000
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA 326 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~ 326 (1067)
.....|+.+++++..+. . .+ .+...+.+ .+.+ .+|||||+|... +..+..+++.
T Consensus 48 ~~~~~~i~~~~~~~~~~------~-~~----~~~~~l~~-------~l~~-------~~~Divh~~~~~-~~~~~~~~~~ 101 (374)
T TIGR03088 48 RIQRPDVAFYALHKQPG------K-DV----AVYPQLYR-------LLRQ-------LRPDIVHTRNLA-ALEAQLPAAL 101 (374)
T ss_pred HHHhcCceEEEeCCCCC------C-Ch----HHHHHHHH-------HHHH-------hCCCEEEEcchh-HHHHHHHHHh
Confidence 01124778887764221 0 01 11111222 2222 469999999753 3334455556
Q ss_pred CCCcE-EEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHH
Q 001492 327 LNVPM-VLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKV 405 (1067)
Q Consensus 327 ~giP~-V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~ 405 (1067)
.++|. +++.|+....... + ....|++.+ +.....+|.++++|+...+.+...+.
T Consensus 102 ~~~~~~i~~~h~~~~~~~~-----~------~~~~~~~~~-----~~~~~~~~~~i~vs~~~~~~~~~~~~--------- 156 (374)
T TIGR03088 102 AGVPARIHGEHGRDVFDLD-----G------SNWKYRWLR-----RLYRPLIHHYVAVSRDLEDWLRGPVK--------- 156 (374)
T ss_pred cCCCeEEEeecCcccccch-----h------hHHHHHHHH-----HHHHhcCCeEEEeCHHHHHHHHHhcC---------
Confidence 67775 5666754211100 0 011222332 23456689999999987776544332
Q ss_pred HHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEE
Q 001492 406 LRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILA 485 (1067)
Q Consensus 406 l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~ 485 (1067)
.+..++.+||||+|.+.|.+..... . ..........++++|++
T Consensus 157 -------------~~~~~~~vi~ngvd~~~~~~~~~~~---~---------------------~~~~~~~~~~~~~~i~~ 199 (374)
T TIGR03088 157 -------------VPPAKIHQIYNGVDTERFHPSRGDR---S---------------------PILPPDFFADESVVVGT 199 (374)
T ss_pred -------------CChhhEEEeccCccccccCCCccch---h---------------------hhhHhhcCCCCCeEEEE
Confidence 1223899999999998886543100 0 00111123456789999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccC--CCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCH
Q 001492 486 LSRPDPKKNITTLLKAFGECRPLRE--LANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDV 562 (1067)
Q Consensus 486 vgRld~~Kgi~~ll~A~~~l~~l~~--~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl 562 (1067)
+||+.+.||++.+++|+..+..... .+++.+ ++|+++. ...+.+.++.+++...|.|+|. .+|+
T Consensus 200 vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~ 266 (374)
T TIGR03088 200 VGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGPA-----------RGACEQMVRAAGLAHLVWLPGE--RDDV 266 (374)
T ss_pred EecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCCch-----------HHHHHHHHHHcCCcceEEEcCC--cCCH
Confidence 9999999999999999998853221 235665 7888764 2456678888999899999996 6799
Q ss_pred HHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHH
Q 001492 563 PEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLW 642 (1067)
Q Consensus 563 ~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~ 642 (1067)
..+|+.| |++|+||..||||++++||||||+|||+|+.||..|++.++.+|++++++|+++++++|.+++++++.+
T Consensus 267 ~~~~~~a----di~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~ 342 (374)
T TIGR03088 267 PALMQAL----DLFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSDPAAR 342 (374)
T ss_pred HHHHHhc----CEEEeccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCHHHH
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-HcCCHHHHHHHHHHHHHHh
Q 001492 643 VECRKNGWKNI-HLFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 643 ~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~ 672 (1067)
..+++++++.+ ++|||+.++++|.++|+++
T Consensus 343 ~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~ 373 (374)
T TIGR03088 343 RAHGAAGRARAEQQFSINAMVAAYAGLYDQL 373 (374)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 99999999998 6999999999999999875
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=352.65 Aligned_cols=444 Identities=21% Similarity=0.197 Sum_probs=279.2
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCccc-c-----cCCCC
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAE-M-----LTGGP 240 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e-~-----l~~~~ 240 (1067)
||++|+.... ....+||+..++..|+++|+++| |+|+|+++.+..-...+ ...... . .....
T Consensus 1 ~Il~v~~E~~---------p~~k~GGl~~~~~~L~~aL~~~G--~~V~Vi~p~y~~~~~~~-~~~~~~~~~~~~~~~~~~ 68 (476)
T cd03791 1 KVLFVASEVA---------PFAKTGGLGDVVGALPKALAKLG--HDVRVIMPKYGRILDEL-RGQLLVLRLFGVPVGGRP 68 (476)
T ss_pred CEEEEEcccc---------ccccCCcHHHHHHHHHHHHHHCC--CeEEEEecCCcchhhHh-ccCeEEEEEEeeccCCce
Confidence 5899986543 22479999999999999999999 99999998654311100 000000 0 00000
Q ss_pred CCCCccccccCCeEEEeccCCCCc--cCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhH
Q 001492 241 EDDGIEVGESSGAYIIRIPFGPRD--KYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGD 318 (1067)
Q Consensus 241 ~~~~~~~~~~~gv~i~ri~~~~~~--~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~ 318 (1067)
..........+|+.++++...... ..+......++...+. .+..+.......+.. + ..+|||||+|.|.++.
T Consensus 69 ~~~~~~~~~~~gv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~f~~~~~~~l~~-~----~~~pDviH~hd~~t~~ 142 (476)
T cd03791 69 EYVGVFELPVDGVPVYFLDNPDYFDRPGLYDDSGYDYEDNAE-RFALFSRAALELLRR-L----GWKPDIIHCHDWHTGL 142 (476)
T ss_pred eEEEEEEEEeCCceEEEEcChHHcCCCCCCCccCCCCccHHH-HHHHHHHHHHHHHHh-c----CCCCcEEEECchHHHH
Confidence 000001122367888887652210 0000001111111110 011111111111111 1 2469999999998888
Q ss_pred HHHHHHhcC------CCcEEEEeCCCchhh---HHHHHhhCCCC-hhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHH
Q 001492 319 SAALLSGAL------NVPMVLTGHSLGRNK---LEQLLKQGRQS-KEDINSTYKIMRRIEGEELSLDAAELVITSTKQEI 388 (1067)
Q Consensus 319 ~a~~l~~~~------giP~V~t~H~l~~~~---~~~l~~~g~~~-~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~ 388 (1067)
++.+++... ++|+|+|+|++.... ...+...+... .......+.+...+..++.++..||.|+++|+...
T Consensus 143 ~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~ 222 (476)
T cd03791 143 VPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYA 222 (476)
T ss_pred HHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCHhHH
Confidence 888877663 899999999985422 11111111000 00000011112233457778999999999999888
Q ss_pred HHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcch-h
Q 001492 389 DEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPA-I 467 (1067)
Q Consensus 389 ~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 467 (1067)
+++...+.+.. +...+ .....++.+||||+|.+.|.|... + .+...+.. ........ .
T Consensus 223 ~~i~~~~~~~g--l~~~~-----------~~~~~ki~~I~NGid~~~~~p~~~-~----~~~~~~~~---~~~~~~~~~k 281 (476)
T cd03791 223 REILTPEFGEG--LDGLL-----------RARAGKLSGILNGIDYDVWNPATD-P----HLPANYSA---DDLEGKAENK 281 (476)
T ss_pred HHhCCCCCCcc--hHHHH-----------HhccCCeEEEeCCCcCcccCcccc-c----hhhhcCCc---cccccHHHHH
Confidence 87654322111 01111 112248999999999999987542 1 11000000 00000000 0
Q ss_pred hHhhhhhcc--CCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCChhhhhccchHHHHHHHHHHHh
Q 001492 468 WSDVMRFLT--NPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLT-LIMGNRDDIEEMSSGNASVLITVLKLIDK 544 (1067)
Q Consensus 468 ~~~~~~~~~--~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~-lIvG~~~~~~~l~~~~~~~~~~i~~l~~~ 544 (1067)
...+.++.. .+++++|+++||+.+.||++.+++|+..+.+ .. +. +++|+++. .+...+..++.+
T Consensus 282 ~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~--~~lvi~G~g~~---------~~~~~~~~~~~~ 348 (476)
T cd03791 282 AALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLE--LG--GQLVILGSGDP---------EYEEALRELAAR 348 (476)
T ss_pred HHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHH--cC--cEEEEEecCCH---------HHHHHHHHHHHh
Confidence 112233333 3688999999999999999999999999853 22 44 47788742 233455566665
Q ss_pred cCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCC------ceE
Q 001492 545 YDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALN------NGL 618 (1067)
Q Consensus 545 ~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~------~Gl 618 (1067)
+ .+++.|.+..+.+.+..+|+.| |++|+||.+||||++++|||+||+|||+++.||..|++.++. +|+
T Consensus 349 ~--~~~v~~~~~~~~~~~~~~~~~a----Dv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~ 422 (476)
T cd03791 349 Y--PGRVAVLIGYDEALAHLIYAGA----DFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGF 422 (476)
T ss_pred C--CCcEEEEEeCCHHHHHHHHHhC----CEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeE
Confidence 5 4678776666667778999999 999999999999999999999999999999999999999987 999
Q ss_pred EeCCCCHHHHHHHHHHhhc---CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 001492 619 LVDPHDQQAIADALLKLVS---EKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 619 lv~p~d~~~la~aL~~ll~---d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~ 670 (1067)
+++|.|+++++++|.++++ +++.++++++++++ ..|||+.++++|+++|+
T Consensus 423 ~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 423 VFEGYNADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLELYR 475 (476)
T ss_pred EeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHh
Confidence 9999999999999999885 67888888777754 47999999999999986
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=338.82 Aligned_cols=376 Identities=17% Similarity=0.180 Sum_probs=254.4
Q ss_pred HHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCcccccccchhH
Q 001492 198 VELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQ 277 (1067)
Q Consensus 198 ~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~ 277 (1067)
.+||++|+++| |+|+++|+.... .. ..|+++++++..+.. .+ ..++|..
T Consensus 14 ~~la~~L~~~G--~~v~~~~~~~~~-~~------------------------~~~v~~~~~~~~~~~---~~-~~~~~~~ 62 (396)
T cd03818 14 RHLAPALAAQG--HEVVFLTEPNAA-PP------------------------PGGVRVVRYRPPRGP---TS-GTHPYLR 62 (396)
T ss_pred HHHHHHHHHCC--CEEEEEecCCCC-CC------------------------CCCeeEEEecCCCCC---CC-CCCccch
Confidence 56999999999 999999985311 00 016899998865441 11 4667777
Q ss_pred HHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc-CCCcEEEEeCCCchhhHHHH-HhhCCCChh
Q 001492 278 EFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA-LNVPMVLTGHSLGRNKLEQL-LKQGRQSKE 355 (1067)
Q Consensus 278 ~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~-~giP~V~t~H~l~~~~~~~l-~~~g~~~~~ 355 (1067)
.|...+..... +.+.+.... .++++|||||+|.... .+..+... .++|+|.++|.++....... +.......
T Consensus 63 ~~~~~~~~~~~-~~~~~~~~~--~~~~~pdvi~~h~~~~--~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~- 136 (396)
T cd03818 63 EFEEAVLRGQA-VARALLALR--AKGFRPDVIVAHPGWG--ETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPS- 136 (396)
T ss_pred hHHHHHHHHHH-HHHHHHHHH--hcCCCCCEEEECCccc--hhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCc-
Confidence 77654443222 122222211 1246799999997532 12233333 46999987765432210000 00000000
Q ss_pred hhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCC
Q 001492 356 DINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSN 435 (1067)
Q Consensus 356 ~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~ 435 (1067)
. ....++..+.......+..||.||++|+...+.+...+. .++.|||||+|.+.
T Consensus 137 ~-~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~-------------------------~ki~vI~ngvd~~~ 190 (396)
T cd03818 137 L-DDALRLRNRNALILLALAQADAGVSPTRWQRSTFPAELR-------------------------SRISVIHDGIDTDR 190 (396)
T ss_pred h-hHHHHHHHhhhHhHHHHHhCCEEECCCHHHHhhCcHhhc-------------------------cceEEeCCCccccc
Confidence 0 001111111112346789999999999977665432221 28999999999999
Q ss_pred ccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeC-CCCCCCHHHHHHHHHhcccccCCCcE
Q 001492 436 VVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSR-PDPKKNITTLLKAFGECRPLRELANL 514 (1067)
Q Consensus 436 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgR-ld~~Kgi~~ll~A~~~l~~l~~~~~l 514 (1067)
|.+.... ..... ......++.++|+++|| +.+.||++.+++|+..+. ...+++
T Consensus 191 f~~~~~~---~~~~~---------------------~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~--~~~~~~ 244 (396)
T cd03818 191 LRPDPQA---RLRLP---------------------NGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLL--RARPDA 244 (396)
T ss_pred cCCCchh---hhccc---------------------ccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHH--HHCCCc
Confidence 8765410 00000 00112356789999998 999999999999999885 345677
Q ss_pred EE-EEecCC-ChhhhhccchHHHHHHHHHHH-hcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHH
Q 001492 515 TL-IMGNRD-DIEEMSSGNASVLITVLKLID-KYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIE 591 (1067)
Q Consensus 515 ~l-IvG~~~-~~~~l~~~~~~~~~~i~~l~~-~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllE 591 (1067)
.+ |+|++. .+.........+...+.+... +++ .++|.|+|+++.++++.+|+.| |++|+||..|+||++++|
T Consensus 245 ~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~V~f~G~v~~~~~~~~l~~a----dv~v~~s~~e~~~~~llE 319 (396)
T cd03818 245 RVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLD-LSRVHFLGRVPYDQYLALLQVS----DVHVYLTYPFVLSWSLLE 319 (396)
T ss_pred EEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccC-cceEEEeCCCCHHHHHHHHHhC----cEEEEcCcccccchHHHH
Confidence 65 777632 111100011112233322222 222 4789999999999999999999 999999999999999999
Q ss_pred HHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHH
Q 001492 592 AAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIH-LFSWPEHCRTYLT 667 (1067)
Q Consensus 592 AmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~-~fsw~~~a~~~l~ 667 (1067)
|||||+|||+|+.||..|++.++.+|+++++.|+++++++|.+++++++++.++++++++.++ +|||+.++++|++
T Consensus 320 AmA~G~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 320 AMACGCLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLDDPARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred HHHCCCCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999995 7999999998863
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-34 Score=330.87 Aligned_cols=369 Identities=16% Similarity=0.207 Sum_probs=263.6
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
||+|++.--+ |+ | ....||+++++.++++.|+ ++|+++|.... .|.. .|
T Consensus 4 ~~~~~~~~~~----~~--p-~~~~g~ve~~~~~~~~~l~-----~~~~~~~~~~~------~~~~-~~------------ 52 (380)
T PRK15484 4 KIIFTVTPIF----SI--P-PRGAAAVETWIYQVAKRTS-----IPNRIACIKNP------GYPE-YT------------ 52 (380)
T ss_pred eEEEEeccCC----CC--C-CccccHHHHHHHHhhhhcc-----CCeeEEEecCC------CCCc-hh------------
Confidence 7899887665 22 1 1248999999999999994 58999998542 1111 00
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchh--HHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHH
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYI--QEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLS 324 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l--~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~ 324 (1067)
...+|+.++++++... |......|-.+ ..+...++..+.. ....++||||+|... .....+..
T Consensus 53 -~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~vi~v~~~~-~~~~~~~~ 117 (380)
T PRK15484 53 -KVNDNCDIHYIGFSRI--YKRLFQKWTRLDPLPYSQRILNIAHK-----------FTITKDSVIVIHNSM-KLYRQIRE 117 (380)
T ss_pred -hccCCCceEEEEeccc--cchhhhhhhccCchhHHHHHHHHHHh-----------cCCCCCcEEEEeCcH-HhHHHHHh
Confidence 1124677777755221 11100111000 1222222222111 112459999999853 33444455
Q ss_pred hcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHH
Q 001492 325 GALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEK 404 (1067)
Q Consensus 325 ~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~ 404 (1067)
+..+.|+|++.|+.+... .+..++.+|++|+...+.+...+.
T Consensus 118 ~~~~~~~v~~~h~~~~~~------------------------------~~~~~~~ii~~S~~~~~~~~~~~~-------- 159 (380)
T PRK15484 118 RAPQAKLVMHMHNAFEPE------------------------------LLDKNAKIIVPSQFLKKFYEERLP-------- 159 (380)
T ss_pred hCCCCCEEEEEecccChh------------------------------HhccCCEEEEcCHHHHHHHHhhCC--------
Confidence 566789999999752111 134678999999877665433221
Q ss_pred HHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEE
Q 001492 405 VLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMIL 484 (1067)
Q Consensus 405 ~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il 484 (1067)
..++.+||||+|...|.+... .....++...+++++|+
T Consensus 160 ----------------~~~i~vIpngvd~~~~~~~~~--------------------------~~~~~~~~~~~~~~~il 197 (380)
T PRK15484 160 ----------------NADISIVPNGFCLETYQSNPQ--------------------------PNLRQQLNISPDETVLL 197 (380)
T ss_pred ----------------CCCEEEecCCCCHHHcCCcch--------------------------HHHHHHhCCCCCCeEEE
Confidence 137899999999987764321 00112233445678999
Q ss_pred EEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHH
Q 001492 485 ALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVP 563 (1067)
Q Consensus 485 ~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~ 563 (1067)
++||+.+.||++.|++|+..+. ...|++.+ |+|+++.... .+...+...+.+++..++ .+|.|.|+++.+++.
T Consensus 198 ~~Grl~~~Kg~~~Li~A~~~l~--~~~p~~~lvivG~g~~~~~--~~~~~~~~~l~~~~~~l~--~~v~~~G~~~~~~l~ 271 (380)
T PRK15484 198 YAGRISPDKGILLLMQAFEKLA--TAHSNLKLVVVGDPTASSK--GEKAAYQKKVLEAAKRIG--DRCIMLGGQPPEKMH 271 (380)
T ss_pred EeccCccccCHHHHHHHHHHHH--HhCCCeEEEEEeCCccccc--cchhHHHHHHHHHHHhcC--CcEEEeCCCCHHHHH
Confidence 9999999999999999999985 45677776 7888753211 112345667777777765 479999999999999
Q ss_pred HHHHHhhcCCcEEEecCCC-CCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceE-EeCCCCHHHHHHHHHHhhcCHHH
Q 001492 564 EIYRLAAKTKGVFINPALV-EPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGL-LVDPHDQQAIADALLKLVSEKNL 641 (1067)
Q Consensus 564 ~ly~~A~~~~dV~v~ps~~-EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gl-lv~p~d~~~la~aL~~ll~d~~~ 641 (1067)
.+|+.| |++|+||.+ |+||++++||||||+|||+|+.||..|++.++.+|+ +++|.|+++++++|.++++|+++
T Consensus 272 ~~~~~a----Dv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~~ 347 (380)
T PRK15484 272 NYYPLA----DLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPEL 347 (380)
T ss_pred HHHHhC----CEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHHH
Confidence 999999 999999975 999999999999999999999999999999999998 56899999999999999999986
Q ss_pred HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHh
Q 001492 642 WVECRKNGWKNI-HLFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 642 ~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~ 672 (1067)
.++++++++.+ ++|||+.++++|++.|+..
T Consensus 348 -~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 348 -TQIAEQAKDFVFSKYSWEGVTQRFEEQIHNW 378 (380)
T ss_pred -HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 67999999887 6999999999999999864
|
|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-34 Score=332.98 Aligned_cols=385 Identities=19% Similarity=0.217 Sum_probs=264.4
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCc
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGI 245 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1067)
|||+++.... ..||.++++.+||++|+++| |+|+|+|...... ..+.+
T Consensus 1 mkIl~~~~~~-------------~~gG~e~~~~~la~~L~~~G--~~V~v~~~~~~~~---~~~~~-------------- 48 (392)
T cd03805 1 LRVAFIHPDL-------------GIGGAERLVVDAALALQSRG--HEVTIYTSHHDPS---HCFEE-------------- 48 (392)
T ss_pred CeEEEECCCC-------------CCchHHHHHHHHHHHHHhCC--CeEEEEcCCCCch---hcchh--------------
Confidence 7899996332 27899999999999999999 9999999742110 00000
Q ss_pred cccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHh
Q 001492 246 EVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSG 325 (1067)
Q Consensus 246 ~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~ 325 (1067)
. ...++.+..++. ++++. ++.....+.. .+..+...+...+. ...+||+||+|....+..+. ..
T Consensus 49 -~-~~~~~~i~~~~~-----~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~--~~~~~Dvi~~~~~~~~~~~~--~~ 112 (392)
T cd03805 49 -T-KDGTLPVRVRGD-----WLPRS-IFGRFHILCA----YLRMLYLALYLLLL--PDEKYDVFIVDQVSACVPLL--KL 112 (392)
T ss_pred -c-cCCeeEEEEEeE-----EEcch-hhHhHHHHHH----HHHHHHHHHHHHhc--ccCCCCEEEEcCcchHHHHH--HH
Confidence 0 011243333221 11111 1111111111 11111111100000 12469999999764433322 22
Q ss_pred cCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhH-HHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHH
Q 001492 326 ALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYK-IMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEK 404 (1067)
Q Consensus 326 ~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~-~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~ 404 (1067)
..+.|+|++.|... . .... ........++ ++.. .|+..++.||.|+++|+...+.+...+.....
T Consensus 113 ~~~~~~i~~~h~~~--~---~~~~---~~~~~~~~~~~~~~~--~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~---- 178 (392)
T cd03805 113 FSPSKILFYCHFPD--Q---LLAQ---RGSLLKRLYRKPFDW--LEEFTTGMADKIVVNSNFTASVFKKTFPSLAK---- 178 (392)
T ss_pred hcCCcEEEEEecCh--H---HhcC---CCcHHHHHHHHHHHH--HHHHHhhCceEEEEcChhHHHHHHHHhccccc----
Confidence 23489999999432 1 1111 0111112222 2223 37788999999999999877766555433211
Q ss_pred HHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEE
Q 001492 405 VLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMIL 484 (1067)
Q Consensus 405 ~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il 484 (1067)
..+.|||||+|.+.|.+..... . .......++.++|+
T Consensus 179 -----------------~~~~vi~n~vd~~~~~~~~~~~----~----------------------~~~~~~~~~~~~i~ 215 (392)
T cd03805 179 -----------------NPREVVYPCVDTDSFESTSEDP----D----------------------PGLLIPKSGKKTFL 215 (392)
T ss_pred -----------------CCcceeCCCcCHHHcCcccccc----c----------------------ccccccCCCceEEE
Confidence 1346999999998886543100 0 01112345678999
Q ss_pred EEeCCCCCCCHHHHHHHHHhcccccCC---CcEEE-EEecCCChhhhhccchHHHHHHHHHHHh-cCCCCcEEeCCCCCC
Q 001492 485 ALSRPDPKKNITTLLKAFGECRPLREL---ANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDK-YDLYGQVAYPKHHKQ 559 (1067)
Q Consensus 485 ~vgRld~~Kgi~~ll~A~~~l~~l~~~---~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~-~~l~~~V~~~g~~~~ 559 (1067)
++||+.+.||++.+++|+.++.. .. +++.+ ++|+++.. .....++..++..++++ +++.++|.|+|+++.
T Consensus 216 ~~grl~~~Kg~~~ll~a~~~l~~--~~~~~~~~~l~i~G~~~~~---~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~ 290 (392)
T cd03805 216 SINRFERKKNIALAIEAFAILKD--KLAEFKNVRLVIAGGYDPR---VAENVEYLEELQRLAEELLLLEDQVIFLPSISD 290 (392)
T ss_pred EEeeecccCChHHHHHHHHHHHh--hcccccCeEEEEEcCCCCC---CchhHHHHHHHHHHHHHhcCCCceEEEeCCCCh
Confidence 99999999999999999999853 33 56665 78876532 11224566788899999 899999999999999
Q ss_pred CCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCH
Q 001492 560 YDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEK 639 (1067)
Q Consensus 560 ~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~ 639 (1067)
+++..+|+.| |++++||..|+||++++||||||+|||+|+.||+.|++.++.+|+++++ |+++++++|.++++++
T Consensus 291 ~~~~~~l~~a----d~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~ 365 (392)
T cd03805 291 SQKELLLSSA----RALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDP 365 (392)
T ss_pred HHHHHHHhhC----eEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhCh
Confidence 9999999999 9999999999999999999999999999999999999999999999976 8999999999999999
Q ss_pred HHHHHHHHHHHHHH-HcCCHHHHHHHH
Q 001492 640 NLWVECRKNGWKNI-HLFSWPEHCRTY 665 (1067)
Q Consensus 640 ~~~~~~~~~~~~~~-~~fsw~~~a~~~ 665 (1067)
++++++++++++.+ ++|||+.+++++
T Consensus 366 ~~~~~~~~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 366 DLADRMGAAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHhhhC
Confidence 99999999999998 599999998764
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=344.04 Aligned_cols=395 Identities=15% Similarity=0.091 Sum_probs=263.5
Q ss_pred ccCCCce-EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCC--Ce----------eEEEEEecCCCCCCCC
Q 001492 160 DKKEKKL-YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMP--GV----------YRVDLFSRQVSSPEVD 226 (1067)
Q Consensus 160 ~~~~~~m-~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G--~v----------~~V~v~t~~~~~~~~~ 226 (1067)
+....+. ||++|.... ..||.++++..||.+|.+++ +. ..|.+++.......
T Consensus 275 ~~~~~~~~rIl~vi~sl-------------~~GGAEr~~~~La~~l~~~~~~~~~~~g~g~~~~~~V~~~~~~~~~g~-- 339 (694)
T PRK15179 275 AGPESFVGPVLMINGSL-------------GAGGAERQFVNTAVALQSAIQQGQSIAGYGVLGPVQVVCRSLRSREGA-- 339 (694)
T ss_pred CCCCCCcceEEEEeCCC-------------CCCcHHHHHHHHHHHHHhcccCcccccCccCCCCcEEEEEecccccCc--
Confidence 4445666 899997322 37899999999999999984 00 23444432110000
Q ss_pred CcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCccccc-ccchhHHH---H-HHHHHHHHHHhHHHHhhhcCC
Q 001492 227 WSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKEL-LWPYIQEF---V-DGALAHCLNMSKVLGEQIGGG 301 (1067)
Q Consensus 227 ~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k~~-l~~~l~~f---~-~~~l~~~~~~~~~L~~~~~~~ 301 (1067)
..|. +.+ ...|+.++.++..+. ....... ....+..+ . ......+.++.+.+.+
T Consensus 340 ~~~~---~~L------------~~~Gv~v~~l~~~~~-~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~----- 398 (694)
T PRK15179 340 DFFA---ATL------------ADAGIPVSVYSDMQA-WGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRS----- 398 (694)
T ss_pred chHH---HHH------------HhCCCeEEEeccCCc-cCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHH-----
Confidence 0000 011 124777777754332 1111100 00011100 0 0122223333333333
Q ss_pred CCCCceEEEEcCCchhHHHHHHHhcCCCcEEE-EeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEE
Q 001492 302 QPVWPYVIHGHYADAGDSAALLSGALNVPMVL-TGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELV 380 (1067)
Q Consensus 302 ~~~~pDvIh~h~~~a~~~a~~l~~~~giP~V~-t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~V 380 (1067)
.+|||||+|...+..++.++++..++|+|+ +.|++........ ....|....+ ......++.+
T Consensus 399 --~kpDIVH~h~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~~~~----------~~~~~~~l~~----~l~~~~~~i~ 462 (694)
T PRK15179 399 --SVPSVVHIWQDGSIFACALAALLAGVPRIVLSVRTMPPVDRPDR----------YRVEYDIIYS----ELLKMRGVAL 462 (694)
T ss_pred --cCCcEEEEeCCcHHHHHHHHHHHcCCCEEEEEeCCCccccchhH----------HHHHHHHHHH----HHHhcCCeEE
Confidence 579999999987778888888888999976 5676532211100 0111211111 1112345667
Q ss_pred EeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCC
Q 001492 381 ITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSS 460 (1067)
Q Consensus 381 i~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1067)
++.|....+.+...+. .+..++.|||||||...|.+... ....
T Consensus 463 Vs~S~~~~~~l~~~~g----------------------~~~~kI~VI~NGVd~~~f~~~~~---~~~~------------ 505 (694)
T PRK15179 463 SSNSQFAAHRYADWLG----------------------VDERRIPVVYNGLAPLKSVQDDA---CTAM------------ 505 (694)
T ss_pred EeCcHHHHHHHHHHcC----------------------CChhHEEEECCCcCHHhcCCCch---hhHH------------
Confidence 7777766555433322 22248999999999888754221 0000
Q ss_pred CCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHH
Q 001492 461 PKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVL 539 (1067)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~ 539 (1067)
+... +.....+.++|+++||+.+.||++.+++||..+. ...+++.+ |+|+++. ...+.
T Consensus 506 -------~~~~-~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~--~~~p~~~LvIvG~G~~-----------~~~L~ 564 (694)
T PRK15179 506 -------MAQF-DARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFA--ASHPKVRFIMVGGGPL-----------LESVR 564 (694)
T ss_pred -------HHhh-ccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHH--HHCcCeEEEEEccCcc-----------hHHHH
Confidence 0000 0112345678999999999999999999999884 45577776 8898764 35577
Q ss_pred HHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEE
Q 001492 540 KLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLL 619 (1067)
Q Consensus 540 ~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gll 619 (1067)
++++++++.++|.|+|+. ++++.+|+.| |+||+||.+|+||++++||||||+|||+|+.||+.|+|.++.+|++
T Consensus 565 ~l~~~lgL~~~V~flG~~--~dv~~ll~aa----Dv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlL 638 (694)
T PRK15179 565 EFAQRLGMGERILFTGLS--RRVGYWLTQF----NAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLT 638 (694)
T ss_pred HHHHHcCCCCcEEEcCCc--chHHHHHHhc----CEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEE
Confidence 889999999999999995 5899999999 9999999999999999999999999999999999999999999999
Q ss_pred eCCCCH--HHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Q 001492 620 VDPHDQ--QAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 620 v~p~d~--~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~ 670 (1067)
|+|+|. ++++++|.+++.+......+++++++++ ++|||+.++++|+++|+
T Consensus 639 v~~~d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 639 LPADTVTAPDVAEALARIHDMCAADPGIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred eCCCCCChHHHHHHHHHHHhChhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 998774 6899999998887666667888999988 59999999999999995
|
|
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=316.37 Aligned_cols=359 Identities=19% Similarity=0.216 Sum_probs=255.5
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
||++|+.+++ .|..||+++++.+|+++|.++| |+|+|+|........
T Consensus 1 ~i~~i~~~~~----------~~~~gG~~~~~~~la~~L~~~g--~~v~v~~~~~~~~~~--------------------- 47 (363)
T cd04955 1 KIAIIGTRGI----------PAKYGGFETFVEELAPRLVARG--HEVTVYCRSPYPKQK--------------------- 47 (363)
T ss_pred CeEEEecCcC----------CcccCcHHHHHHHHHHHHHhcC--CCEEEEEccCCCCCc---------------------
Confidence 6899987776 2678999999999999999999 999999985321110
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA 326 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~ 326 (1067)
....+|+.++++|..... . +..+...+ ..+.+.+.. ..++|+||...+.. ..+..+.+.
T Consensus 48 ~~~~~~i~~~~~~~~~~~-~---------~~~~~~~~----~~~~~~~~~------~~~~~~i~~~~~~~-~~~~~~~~~ 106 (363)
T cd04955 48 ETEYNGVRLIHIPAPEIG-G---------LGTIIYDI----LAILHALFV------KRDIDHVHALGPAI-APFLPLLRL 106 (363)
T ss_pred ccccCCceEEEcCCCCcc-c---------hhhhHHHH----HHHHHHHhc------cCCeEEEEecCccH-HHHHHHHHh
Confidence 012358888888753210 0 00111111 111111110 13466776665544 333444555
Q ss_pred CCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHH
Q 001492 327 LNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVL 406 (1067)
Q Consensus 327 ~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l 406 (1067)
.++|+|++.|+...... .+.. ....+.+. .|+..++.+|.|+++|+...+.+...|+.
T Consensus 107 ~~~~~v~~~h~~~~~~~-------~~~~----~~~~~~~~--~~~~~~~~ad~ii~~s~~~~~~~~~~~~~--------- 164 (363)
T cd04955 107 KGKKVVVNMDGLEWKRA-------KWGR----PAKRYLKF--GEKLAVKFADRLIADSPGIKEYLKEKYGR--------- 164 (363)
T ss_pred cCCCEEEEccCcceeec-------cccc----chhHHHHH--HHHHHHhhccEEEeCCHHHHHHHHHhcCC---------
Confidence 69999999998743221 0000 01122222 35667899999999999877765444432
Q ss_pred HHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEE
Q 001492 407 RARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILAL 486 (1067)
Q Consensus 407 ~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~v 486 (1067)
+..+||||+|...+.+.. . ...... .+..+.|+++
T Consensus 165 ----------------~~~~i~ngv~~~~~~~~~-------~---------------------~~~~~~-~~~~~~i~~~ 199 (363)
T cd04955 165 ----------------DSTYIPYGADHVVSSEED-------E---------------------ILKKYG-LEPGRYYLLV 199 (363)
T ss_pred ----------------CCeeeCCCcChhhcchhh-------h---------------------hHHhcC-CCCCcEEEEE
Confidence 238999999987665311 0 001111 2334578999
Q ss_pred eCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCChhhhhccchHHHHHHHHHHH-hcCCCCcEEeCCCCCCCCHHH
Q 001492 487 SRPDPKKNITTLLKAFGECRPLRELANLT-LIMGNRDDIEEMSSGNASVLITVLKLID-KYDLYGQVAYPKHHKQYDVPE 564 (1067)
Q Consensus 487 gRld~~Kgi~~ll~A~~~l~~l~~~~~l~-lIvG~~~~~~~l~~~~~~~~~~i~~l~~-~~~l~~~V~~~g~~~~~dl~~ 564 (1067)
||+.+.||++.+++|+.++.. ++. +++|+++.... +...+. .++..++|.|+|+++.+++..
T Consensus 200 G~~~~~Kg~~~li~a~~~l~~-----~~~l~ivG~~~~~~~-----------~~~~~~~~~~~~~~V~~~g~~~~~~~~~ 263 (363)
T cd04955 200 GRIVPENNIDDLIEAFSKSNS-----GKKLVIVGNADHNTP-----------YGKLLKEKAAADPRIIFVGPIYDQELLE 263 (363)
T ss_pred ecccccCCHHHHHHHHHhhcc-----CceEEEEcCCCCcch-----------HHHHHHHHhCCCCcEEEccccChHHHHH
Confidence 999999999999999998842 344 48888754322 222222 567788999999999999999
Q ss_pred HHHHhhcCCcEEEecCCC-CCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHH
Q 001492 565 IYRLAAKTKGVFINPALV-EPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWV 643 (1067)
Q Consensus 565 ly~~A~~~~dV~v~ps~~-EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~ 643 (1067)
+|..| |++++||.. |+||++++||||||+|||+|+.|+..|++.+ +|+++++.|. ++++|.+++++++.+.
T Consensus 264 ~~~~a----d~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~l~~~~~~~~ 335 (363)
T cd04955 264 LLRYA----ALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLEELEADPEEVS 335 (363)
T ss_pred HHHhC----CEEEeCCccCCCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHHHHHhCHHHHH
Confidence 99999 999999998 9999999999999999999999999999875 7999988776 9999999999999999
Q ss_pred HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Q 001492 644 ECRKNGWKNIH-LFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 644 ~~~~~~~~~~~-~fsw~~~a~~~l~~~~ 670 (1067)
++++++++.+. .|||+.++++|+++|+
T Consensus 336 ~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 336 AMAKAARERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 99999999985 8999999999999874
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-33 Score=321.66 Aligned_cols=278 Identities=28% Similarity=0.390 Sum_probs=225.7
Q ss_pred CCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeC
Q 001492 304 VWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITS 383 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~ 383 (1067)
.+||+||+|....+..+..+++.+|+|+|++.|+.......... ... .++..+. .++..++.+|.|+++
T Consensus 81 ~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~---~~~------~~~~~~~--~~~~~~~~~d~ii~~ 149 (367)
T cd05844 81 HRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLALL---LRS------RWALYAR--RRRRLARRAALFIAV 149 (367)
T ss_pred hCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccchhh---ccc------chhHHHH--HHHHHHHhcCEEEEC
Confidence 56999999987777778888888999999999975332211110 000 0111222 245668999999999
Q ss_pred CHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCC
Q 001492 384 TKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKA 463 (1067)
Q Consensus 384 S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1067)
|+...+.+... +.+ ..++.++|||+|.+.|.+..
T Consensus 150 s~~~~~~~~~~--~~~---------------------~~~i~vi~~g~d~~~~~~~~----------------------- 183 (367)
T cd05844 150 SQFIRDRLLAL--GFP---------------------PEKVHVHPIGVDTAKFTPAT----------------------- 183 (367)
T ss_pred CHHHHHHHHHc--CCC---------------------HHHeEEecCCCCHHhcCCCC-----------------------
Confidence 99877665432 222 23899999999998776432
Q ss_pred cchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHH
Q 001492 464 IPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLI 542 (1067)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~ 542 (1067)
...+.+.|+++||+.+.||++.+++|+..+. +..+++.+ ++|+++. ..++..++
T Consensus 184 ------------~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~--~~~~~~~l~ivG~g~~-----------~~~~~~~~ 238 (367)
T cd05844 184 ------------PARRPPRILFVGRFVEKKGPLLLLEAFARLA--RRVPEVRLVIIGDGPL-----------LAALEALA 238 (367)
T ss_pred ------------CCCCCcEEEEEEeeccccChHHHHHHHHHHH--HhCCCeEEEEEeCchH-----------HHHHHHHH
Confidence 1234578999999999999999999999985 34567776 7887652 34567788
Q ss_pred HhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC------CCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCc
Q 001492 543 DKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPAL------VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNN 616 (1067)
Q Consensus 543 ~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~------~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~ 616 (1067)
+.+++.++|.|.|+++.+++..+|+.| |++|+||. .|+||++++||||||+|||+++.|+..|++.++.+
T Consensus 239 ~~~~~~~~v~~~g~~~~~~l~~~~~~a----d~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~ 314 (367)
T cd05844 239 RALGLGGRVTFLGAQPHAEVRELMRRA----RIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGET 314 (367)
T ss_pred HHcCCCCeEEECCCCCHHHHHHHHHhC----CEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCe
Confidence 888888999999999999999999999 99999997 59999999999999999999999999999999999
Q ss_pred eEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHH
Q 001492 617 GLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYLT 667 (1067)
Q Consensus 617 Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~ 667 (1067)
|+++++.|+++++++|.+++++++++++++.++++.+ ++|||+.+++++.+
T Consensus 315 g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 315 GLLVPEGDVAALAAALGRLLADPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred eEEECCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 9999999999999999999999999999999999998 59999999998875
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=318.47 Aligned_cols=291 Identities=15% Similarity=0.135 Sum_probs=214.4
Q ss_pred CCceEEEEcCCchhHHHHHHHhcCCCcEEEE-eCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEe
Q 001492 304 VWPYVIHGHYADAGDSAALLSGALNVPMVLT-GHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVIT 382 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t-~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~ 382 (1067)
.+|||||+|...+...+.+.+...|+|++++ .|+.+....... ....|...++- ......+| +++
T Consensus 279 ~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~~~~r~----------~~~e~~~~~~a---~~i~~~sd-~v~ 344 (578)
T PRK15490 279 RKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPVVRKRL----------FKPEYEPLYQA---LAVVPGVD-FMS 344 (578)
T ss_pred cCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCcchhhH----------HHHHHHHhhhh---ceeEecch-hhh
Confidence 6799999998776677777777779999654 665322110000 01111111110 12244455 556
Q ss_pred CCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCC
Q 001492 383 STKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPK 462 (1067)
Q Consensus 383 ~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1067)
.+....+.+...+ +.++ .|+.|||||+|...|.+....+ .
T Consensus 345 ~s~~v~~~l~~~l-gip~---------------------~KI~VIyNGVD~~rf~p~~~~~---~--------------- 384 (578)
T PRK15490 345 NNHCVTRHYADWL-KLEA---------------------KHFQVVYNGVLPPSTEPSSEVP---H--------------- 384 (578)
T ss_pred ccHHHHHHHHHHh-CCCH---------------------HHEEEEeCCcchhhcCccchhh---H---------------
Confidence 6665444443332 2233 4999999999999887643100 0
Q ss_pred CcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHH
Q 001492 463 AIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKL 541 (1067)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l 541 (1067)
..+... +...+++.++|+++||+.+.||...+++++..+. ...|++.+ |+|+++. ..++..+
T Consensus 385 ---~~r~~~-~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~ll--k~~pdirLvIVGdG~~-----------~eeLk~l 447 (578)
T PRK15490 385 ---KIWQQF-TQKTQDADTTIGGVFRFVGDKNPFAWIDFAARYL--QHHPATRFVLVGDGDL-----------RAEAQKR 447 (578)
T ss_pred ---HHHHHh-hhccCCCCcEEEEEEEEehhcCHHHHHHHHHHHH--hHCCCeEEEEEeCchh-----------HHHHHHH
Confidence 001111 1112345678999999999999999999998874 44577775 8898764 3567788
Q ss_pred HHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeC
Q 001492 542 IDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVD 621 (1067)
Q Consensus 542 ~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~ 621 (1067)
+.++++.++|.|+|+ .+|++.+|+.+ |+||+||.+||||++++||||||+|||+|+.||..|+|.++.+|++|+
T Consensus 448 a~elgL~d~V~FlG~--~~Dv~~~LaaA----DVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LVp 521 (578)
T PRK15490 448 AEQLGILERILFVGA--SRDVGYWLQKM----NVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFILD 521 (578)
T ss_pred HHHcCCCCcEEECCC--hhhHHHHHHhC----CEEEEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEEC
Confidence 999999999999998 57999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHH---HHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHH
Q 001492 622 PHDQQAIADAL---LKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYLTRVAA 671 (1067)
Q Consensus 622 p~d~~~la~aL---~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~ 671 (1067)
+.|++++++++ .++....+.+..+++++++.+ ++|||+.++++|+++|+.
T Consensus 522 ~~D~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 522 DAQTVNLDQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 99999988887 445555566667889999999 599999999999999974
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=323.50 Aligned_cols=284 Identities=19% Similarity=0.242 Sum_probs=207.9
Q ss_pred CCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeC
Q 001492 304 VWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITS 383 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~ 383 (1067)
.+|||||+|++.... ...+.+..++|+|++.|+...... ...+++.+ ..+..+|.+++.
T Consensus 84 ~~~Dvv~~h~~~~~~-~~~~~~~~~~~~i~~~H~~~~~~~--------------~~~~~~~~------~~~~~~d~~i~~ 142 (372)
T cd03792 84 LDADVVVIHDPQPLA-LPLFKKKRGRPWIWRCHIDLSSPN--------------RRVWDFLQ------PYIEDYDAAVFH 142 (372)
T ss_pred CCCCEEEECCCCchh-HHHhhhcCCCeEEEEeeeecCCCc--------------HHHHHHHH------HHHHhCCEEeec
Confidence 469999999875322 223333348999999997532110 11122222 346788999988
Q ss_pred CHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCC
Q 001492 384 TKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKA 463 (1067)
Q Consensus 384 S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1067)
+...+. .++. ..++ +||||+|..........+
T Consensus 143 ~~~~~~----------------------~~~~-----~~~~-vipngvd~~~~~~~~~~~-------------------- 174 (372)
T cd03792 143 LPEYVP----------------------PQVP-----PRKV-IIPPSIDPLSGKNRELSP-------------------- 174 (372)
T ss_pred HHHhcC----------------------CCCC-----CceE-EeCCCCCCCccccCCCCH--------------------
Confidence 843221 1111 1244 999999975322111000
Q ss_pred cchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHH
Q 001492 464 IPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLI 542 (1067)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~ 542 (1067)
......+.++...+++++|+++||+.+.||++.+++|+..+.+ ..+++.| ++|+++..+.. ....+.++.
T Consensus 175 -~~~~~~~~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~--~~~~~~l~i~G~g~~~~~~------~~~~~~~~~ 245 (372)
T cd03792 175 -ADIEYILEKYGIDPERPYITQVSRFDPWKDPFGVIDAYRKVKE--RVPDPQLVLVGSGATDDPE------GWIVYEEVL 245 (372)
T ss_pred -HHHHHHHHHhCCCCCCcEEEEEeccccccCcHHHHHHHHHHHh--hCCCCEEEEEeCCCCCCch------hHHHHHHHH
Confidence 0011223345556788999999999999999999999998853 3355554 88887542111 112233444
Q ss_pred HhcCCCCcEEeCCCC--CCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEe
Q 001492 543 DKYDLYGQVAYPKHH--KQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLV 620 (1067)
Q Consensus 543 ~~~~l~~~V~~~g~~--~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv 620 (1067)
+..++.++|.|.|.. +.+++..+|+.| |+|++||.+||||++++||||||+|||+|+.||..+++.++.+|+++
T Consensus 246 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~a----d~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~ 321 (372)
T cd03792 246 EYAEGDPDIHVLTLPPVSDLEVNALQRAS----TVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLV 321 (372)
T ss_pred HHhCCCCCeEEEecCCCCHHHHHHHHHhC----eEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEe
Confidence 456777889998876 788999999999 99999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHH
Q 001492 621 DPHDQQAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYLTRVAA 671 (1067)
Q Consensus 621 ~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~ 671 (1067)
+ +.++++.+|.+++++++++++|++++++.+ +.|||+..+++|+++|+.
T Consensus 322 ~--~~~~~a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 322 D--TVEEAAVRILYLLRDPELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred C--CcHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 7 467899999999999999999999999998 599999999999999975
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-32 Score=310.87 Aligned_cols=342 Identities=25% Similarity=0.306 Sum_probs=255.5
Q ss_pred CChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCccc
Q 001492 190 TGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRK 269 (1067)
Q Consensus 190 ~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k 269 (1067)
.||+++++.+|+++|+++| |+|++++...... . .....++.++.++.....
T Consensus 9 ~gG~e~~~~~l~~~L~~~g--~~v~v~~~~~~~~-------~---------------~~~~~~~~~~~~~~~~~~----- 59 (355)
T cd03819 9 SGGVERGTLELARALVERG--HRSLVASAGGRLV-------A---------------ELEAEGSRHIKLPFISKN----- 59 (355)
T ss_pred cCcHHHHHHHHHHHHHHcC--CEEEEEcCCCchH-------H---------------HHHhcCCeEEEccccccc-----
Confidence 5899999999999999999 9999998632100 0 011236677776653321
Q ss_pred ccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhh
Q 001492 270 ELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQ 349 (1067)
Q Consensus 270 ~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~ 349 (1067)
.+..+ .+ +..+.+.+.+ .+||+||+|.....+.+.++++..++|+|++.|+.+....
T Consensus 60 --~~~~~-~~-------~~~l~~~~~~-------~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~------ 116 (355)
T cd03819 60 --PLRIL-LN-------VARLRRLIRE-------EKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF------ 116 (355)
T ss_pred --hhhhH-HH-------HHHHHHHHHH-------cCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH------
Confidence 11111 11 1111222222 5699999999877777777778889999999998743220
Q ss_pred CCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCC
Q 001492 350 GRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPP 429 (1067)
Q Consensus 350 g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPn 429 (1067)
+ .+..+..+|.+++.|+...+.+...++ .+..++.+|||
T Consensus 117 -------------~------~~~~~~~~~~vi~~s~~~~~~~~~~~~----------------------~~~~k~~~i~n 155 (355)
T cd03819 117 -------------R------YNAIMARGDRVIAVSNFIADHIRENYG----------------------VDPDRIRVIPR 155 (355)
T ss_pred -------------H------HHHHHHhcCEEEEeCHHHHHHHHHhcC----------------------CChhhEEEecC
Confidence 1 122357899999999987766543332 22248999999
Q ss_pred CCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhccccc
Q 001492 430 GMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLR 509 (1067)
Q Consensus 430 GiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~ 509 (1067)
|+|...|.+..... ......+.++...++.++|+++||+.+.||++.+++++..+..
T Consensus 156 gi~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~-- 212 (355)
T cd03819 156 GVDLDRFDPGAVPP---------------------ERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALARLKK-- 212 (355)
T ss_pred CccccccCccccch---------------------HHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHHHHh--
Confidence 99998886543100 0000122333445677899999999999999999999999853
Q ss_pred CCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecC-CCCCCCH
Q 001492 510 ELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPA-LVEPFGL 587 (1067)
Q Consensus 510 ~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps-~~Egfgl 587 (1067)
..+++.+ |+|+++..+ .+...+.+.+.++++.++|.|+|+ .+++..+|+.| |++++|| ..|+||+
T Consensus 213 ~~~~~~l~ivG~~~~~~-------~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~l~~a----d~~i~ps~~~e~~~~ 279 (355)
T cd03819 213 DDPDVHLLIVGDAQGRR-------FYYAELLELIKRLGLQDRVTFVGH--CSDMPAAYALA----DIVVSASTEPEAFGR 279 (355)
T ss_pred cCCCeEEEEEECCcccc-------hHHHHHHHHHHHcCCcceEEEcCC--cccHHHHHHhC----CEEEecCCCCCCCch
Confidence 3456666 788876432 234566678888898899999999 78999999999 9999999 7899999
Q ss_pred HHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhc-CHHHHHHHHHHHHHHH-HcCCHHH
Q 001492 588 TLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVS-EKNLWVECRKNGWKNI-HLFSWPE 660 (1067)
Q Consensus 588 tllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~-d~~~~~~~~~~~~~~~-~~fsw~~ 660 (1067)
+++||||||+|||+++.||..|++.++.+|++++++|+++++++|..++. +++++.++++++++.+ ++|||+.
T Consensus 280 ~l~EA~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f~~~~ 354 (355)
T cd03819 280 TAVEAQAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVETLFSYDR 354 (355)
T ss_pred HHHHHHhcCCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999999999999999999999999999999999975554 8999999999999999 5999975
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-32 Score=324.88 Aligned_cols=293 Identities=22% Similarity=0.289 Sum_probs=235.2
Q ss_pred CCceEEEEcCC-chhHHHHHHHhcCCCcEEEEeCCCchhhHH-HHHhhCCCChhhhh-hHhHHHHhHHHhhcccccCCEE
Q 001492 304 VWPYVIHGHYA-DAGDSAALLSGALNVPMVLTGHSLGRNKLE-QLLKQGRQSKEDIN-STYKIMRRIEGEELSLDAAELV 380 (1067)
Q Consensus 304 ~~pDvIh~h~~-~a~~~a~~l~~~~giP~V~t~H~l~~~~~~-~l~~~g~~~~~~i~-~~y~~~~ri~~E~~~l~~Ad~V 380 (1067)
.++||||+|.. .++..+.++++..|+|+|+|.|+.+..... .+....+ ...... ...++++. .++.+++.||.|
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~-~~~~~~~~~~~~~~~--l~~~~~~~ad~I 248 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADW-EMSYFRRLWIRFFES--LGRLAYQAADRI 248 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhccc-chHHHHHHHHHHHHH--HHHHHHHhCCEE
Confidence 36899999975 577888888999999999999997653321 1211111 111111 11222333 367789999999
Q ss_pred EeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCC
Q 001492 381 ITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSS 460 (1067)
Q Consensus 381 i~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1067)
++.|+...+.+... +.++ .++.|||||+|.+.|.+....
T Consensus 249 i~~s~~~~~~~~~~--g~~~---------------------~ki~vIpNgid~~~f~~~~~~------------------ 287 (475)
T cd03813 249 TTLYEGNRERQIED--GADP---------------------EKIRVIPNGIDPERFAPARRA------------------ 287 (475)
T ss_pred EecCHHHHHHHHHc--CCCH---------------------HHeEEeCCCcCHHHcCCcccc------------------
Confidence 99999776554321 1222 389999999999988654310
Q ss_pred CCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHH
Q 001492 461 PKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVL 539 (1067)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~ 539 (1067)
...++.++|+++||+.+.||++.+++|+..+. ...|++.+ |+|+++.. ..+..++.
T Consensus 288 --------------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~--~~~p~~~l~IvG~g~~~-------~~~~~e~~ 344 (475)
T cd03813 288 --------------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVR--KKIPDAEGWVIGPTDED-------PEYAEECR 344 (475)
T ss_pred --------------ccCCCCcEEEEEeccccccCHHHHHHHHHHHH--HhCCCeEEEEECCCCcC-------hHHHHHHH
Confidence 01346789999999999999999999999985 34678876 88887522 34577888
Q ss_pred HHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhcc------
Q 001492 540 KLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRA------ 613 (1067)
Q Consensus 540 ~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~------ 613 (1067)
++++++++.++|.|+| .+++.++|+.| |++|+||..|+||++++||||||+|||+|+.||..|++.+
T Consensus 345 ~li~~l~l~~~V~f~G---~~~v~~~l~~a----Dv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~ 417 (475)
T cd03813 345 ELVESLGLEDNVKFTG---FQNVKEYLPKL----DVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEAL 417 (475)
T ss_pred HHHHHhCCCCeEEEcC---CccHHHHHHhC----CEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCccccc
Confidence 9999999999999999 57999999999 9999999999999999999999999999999999999998
Q ss_pred CCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Q 001492 614 LNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIH-LFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 614 ~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~-~fsw~~~a~~~l~~~~ 670 (1067)
+.+|++++|.|+++++++|.+++++++.++++++++++.++ .|+|+.++++|.++|+
T Consensus 418 g~~G~lv~~~d~~~la~ai~~ll~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 418 GPAGEVVPPADPEALARAILRLLKDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred CCceEEECCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 56999999999999999999999999999999999999994 8999999999999884
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-32 Score=308.59 Aligned_cols=362 Identities=23% Similarity=0.243 Sum_probs=261.1
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
||++|+.... |..||.+.++..|+++|.++| |+|++++.....+... +
T Consensus 1 kIl~i~~~~~-----------p~~~G~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~~~--~----------------- 48 (364)
T cd03814 1 RIAIVTDTFL-----------PQVNGVVRTLQRLVEHLRARG--HEVLVIAPGPFRESEG--P----------------- 48 (364)
T ss_pred CeEEEecccC-----------ccccceehHHHHHHHHHHHCC--CEEEEEeCCchhhccC--C-----------------
Confidence 5888885543 567999999999999999999 9999999853211100 0
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc-hhHHHHHHHh
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD-AGDSAALLSG 325 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~-a~~~a~~l~~ 325 (1067)
.....+..++.... ....+.. .....+.. .+. ..+||+||+|... .+..+..+++
T Consensus 49 ---~~~~~~~~~~~~~~----~~~~~~~---~~~~~~~~-------~~~-------~~~pdii~~~~~~~~~~~~~~~~~ 104 (364)
T cd03814 49 ---ARVVPVPSVPLPGY----PEIRLAL---PPRRRVRR-------LLD-------AFAPDVVHIATPGPLGLAALRAAR 104 (364)
T ss_pred ---CCceeecccccCcc----cceEecc---cchhhHHH-------HHH-------hcCCCEEEEeccchhhHHHHHHHH
Confidence 01122222221111 0000000 00001111 111 1569999998763 4566677778
Q ss_pred cCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHH
Q 001492 326 ALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKV 405 (1067)
Q Consensus 326 ~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~ 405 (1067)
..++|++++.|+.+........ .. ...++... .++..++.+|.+++.|+...+.+...+.
T Consensus 105 ~~~~~~i~~~~~~~~~~~~~~~------~~---~~~~~~~~--~~~~~~~~~d~i~~~s~~~~~~~~~~~~--------- 164 (364)
T cd03814 105 RLGIPVVTSYHTDFPEYLRYYG------LG---PLSWLAWA--YLRWFHNRADRVLVPSPSLADELRARGF--------- 164 (364)
T ss_pred HcCCCEEEEEecChHHHhhhcc------cc---hHhHhhHH--HHHHHHHhCCEEEeCCHHHHHHHhccCC---------
Confidence 8899999999987553322110 00 01111111 2455688999999999987764322211
Q ss_pred HHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEE
Q 001492 406 LRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILA 485 (1067)
Q Consensus 406 l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~ 485 (1067)
.++.++|+|+|...|.+..... .....+. ..+++.|++
T Consensus 165 ----------------~~~~~~~~g~~~~~~~~~~~~~-------------------------~~~~~~~-~~~~~~i~~ 202 (364)
T cd03814 165 ----------------RRVRLWPRGVDTELFHPRRRDE-------------------------ALRARLG-PPDRPVLLY 202 (364)
T ss_pred ----------------CceeecCCCccccccCcccccH-------------------------HHHHHhC-CCCCeEEEE
Confidence 2789999999998886543100 0111121 345678999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHH
Q 001492 486 LSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPE 564 (1067)
Q Consensus 486 vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ 564 (1067)
+||+.+.||++.+++++..+.. . +++.+ ++|++++.+.+ . +..++|.|.|+++.+++..
T Consensus 203 ~G~~~~~k~~~~~i~~~~~l~~--~-~~~~l~i~G~~~~~~~~-----------~------~~~~~v~~~g~~~~~~~~~ 262 (364)
T cd03814 203 VGRLAPEKNLEALLDADLPLRR--R-PPVRLVIVGDGPARARL-----------E------ARYPNVHFLGFLDGEELAA 262 (364)
T ss_pred EeccccccCHHHHHHHHHHhhh--c-CCceEEEEeCCchHHHH-----------h------ccCCcEEEEeccCHHHHHH
Confidence 9999999999999999999964 2 56665 88887643221 1 4567899999999999999
Q ss_pred HHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHH
Q 001492 565 IYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVE 644 (1067)
Q Consensus 565 ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~ 644 (1067)
+|+.| |++|+|+..|+||++++||||||+|||+++.|+..+++.++.+|+++++.|.++++++|.+++++++.+.+
T Consensus 263 ~~~~~----d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~ 338 (364)
T cd03814 263 AYASA----DVFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADPELRRR 338 (364)
T ss_pred HHHhC----CEEEECcccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCHHHHHH
Confidence 99999 99999999999999999999999999999999999999998999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Q 001492 645 CRKNGWKNIHLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 645 ~~~~~~~~~~~fsw~~~a~~~l~~~~ 670 (1067)
+++++++.++.|+|+.++++++++|+
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (364)
T cd03814 339 MAARARAEAERRSWEAFLDNLLEAYR 364 (364)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHhhC
Confidence 99999999989999999999998873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-32 Score=308.59 Aligned_cols=352 Identities=21% Similarity=0.231 Sum_probs=254.9
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
||++|+.... |+.||.++++.+|+++|.++| |+|+|++.........
T Consensus 1 kil~i~~~~~-----------p~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~-------------------- 47 (357)
T cd03795 1 RVLHVGKFYP-----------PDRGGIEQVIRDLAEGLAARG--IEVAVLCASPEPKGRD-------------------- 47 (357)
T ss_pred CeeEecCCCC-----------CCCCcHHHHHHHHHHHHHhCC--CceEEEecCCCCcchh--------------------
Confidence 5888885554 679999999999999999999 9999999753221110
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA 326 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~ 326 (1067)
....+..+++++.... ....+.... +...+. + ...+||+||+|++............
T Consensus 48 -~~~~~~~~~~~~~~~~------~~~~~~~~~----~~~~~~-----~-------~~~~~Dii~~~~~~~~~~~~~~~~~ 104 (357)
T cd03795 48 -EERNGHRVIRAPSLLN------VASTPFSPS----FFKQLK-----K-------LAKKADVIHLHFPNPLADLALLLLP 104 (357)
T ss_pred -hhccCceEEEeecccc------cccccccHH----HHHHHH-----h-------cCCCCCEEEEecCcchHHHHHHHhc
Confidence 0112445665543111 011111111 111110 0 1257999999987443333333333
Q ss_pred CCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHH
Q 001492 327 LNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVL 406 (1067)
Q Consensus 327 ~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l 406 (1067)
.++|++++.|+..... . ..+.+... .++..+..||.|+++|+...+.+...+..
T Consensus 105 ~~~~~i~~~h~~~~~~-------~--------~~~~~~~~--~~~~~~~~~d~vi~~s~~~~~~~~~~~~~--------- 158 (357)
T cd03795 105 RKKPVVVHWHSDIVKQ-------K--------LLLKLYRP--LQRRFLRRADAIVATSPNYAETSPVLRRF--------- 158 (357)
T ss_pred cCceEEEEEcChhhcc-------c--------hhhhhhhH--HHHHHHHhcCEEEeCcHHHHHHHHHhcCC---------
Confidence 6899999999742211 0 01112222 24557899999999999877654333211
Q ss_pred HHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEE
Q 001492 407 RARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILAL 486 (1067)
Q Consensus 407 ~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~v 486 (1067)
..++.+||||+|...+.+..... ........+.+.|+++
T Consensus 159 --------------~~~~~~i~~gi~~~~~~~~~~~~---------------------------~~~~~~~~~~~~i~~~ 197 (357)
T cd03795 159 --------------RDKVRVIPLGLDPARYPRPDALE---------------------------EAIWRRAAGRPFFLFV 197 (357)
T ss_pred --------------ccceEEecCCCChhhcCCcchhh---------------------------hHhhcCCCCCcEEEEe
Confidence 13899999999998776543100 0111223567899999
Q ss_pred eCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHH
Q 001492 487 SRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEI 565 (1067)
Q Consensus 487 gRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~l 565 (1067)
||+.+.||++.+++|+.++. ++.+ |+|+++. ...+.+.+.++++.++|.|+|+++.+++..+
T Consensus 198 G~~~~~K~~~~li~a~~~l~------~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~ 260 (357)
T cd03795 198 GRLVYYKGLDVLLEAAAALP------DAPLVIVGEGPL-----------EAELEALAAALGLLDRVRFLGRLDDEEKAAL 260 (357)
T ss_pred cccccccCHHHHHHHHHhcc------CcEEEEEeCChh-----------HHHHHHHHHhcCCcceEEEcCCCCHHHHHHH
Confidence 99999999999999999883 4444 7888763 2345567778889999999999999999999
Q ss_pred HHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCCEEEcCCCCchhhhcc-CCceEEeCCCCHHHHHHHHHHhhcCHHHH
Q 001492 566 YRLAAKTKGVFINPAL--VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRA-LNNGLLVDPHDQQAIADALLKLVSEKNLW 642 (1067)
Q Consensus 566 y~~A~~~~dV~v~ps~--~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~-~~~Gllv~p~d~~~la~aL~~ll~d~~~~ 642 (1067)
|+.| |++++||. .|+||++++|||+||+|||+|+.|+..+.+.+ +.+|++++++|+++++++|.+++++++.+
T Consensus 261 ~~~a----d~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~~~~ 336 (357)
T cd03795 261 LAAC----DVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDPELR 336 (357)
T ss_pred HHhC----CEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCHHHH
Confidence 9999 99999986 59999999999999999999999999998886 89999999999999999999999999999
Q ss_pred HHHHHHHHHHH-HcCCHHHHH
Q 001492 643 VECRKNGWKNI-HLFSWPEHC 662 (1067)
Q Consensus 643 ~~~~~~~~~~~-~~fsw~~~a 662 (1067)
+++++++++.+ ++|||+.++
T Consensus 337 ~~~~~~~~~~~~~~~s~~~~~ 357 (357)
T cd03795 337 ERLGEAARERAEEEFTADRMV 357 (357)
T ss_pred HHHHHHHHHHHHHhcchHhhC
Confidence 99999999999 599998763
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=305.40 Aligned_cols=331 Identities=20% Similarity=0.218 Sum_probs=233.9
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCc
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGI 245 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1067)
|||++|+.....- + +|..||+++++.+|+++|.+.| |+|++++.......
T Consensus 1 MkI~~i~~~~~~~------~-~~~~GG~~~~~~~l~~~L~~~g--~~V~v~~~~~~~~~--------------------- 50 (335)
T cd03802 1 MRIALVAPPREPV------P-PPAYGGTERVVAALTEGLVARG--HEVTLFASGDSKTA--------------------- 50 (335)
T ss_pred CeEEEEcCCcccC------C-CcccCcHHHHHHHHHHHHHhcC--ceEEEEecCCCCcc---------------------
Confidence 8999999654311 1 2579999999999999999999 99999997432110
Q ss_pred cccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHh
Q 001492 246 EVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSG 325 (1067)
Q Consensus 246 ~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~ 325 (1067)
...+....... .... +. . . .........+.+.+.+ .+|||||+|.+..... +++
T Consensus 51 -------~~~~~~~~~~~--~~~~---~~-~-~--~~~~~~~~~~~~~~~~-------~~~Divh~~~~~~~~~---~~~ 104 (335)
T cd03802 51 -------APLVPVVPEPL--RLDA---PG-R-D--RAEAEALALAERALAA-------GDFDIVHNHSLHLPLP---FAR 104 (335)
T ss_pred -------cceeeccCCCc--cccc---ch-h-h--HhhHHHHHHHHHHHhc-------CCCCEEEecCcccchh---hhc
Confidence 00011100000 0000 00 0 0 0011111111122211 5699999998755443 566
Q ss_pred cCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHH
Q 001492 326 ALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKV 405 (1067)
Q Consensus 326 ~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~ 405 (1067)
..++|+|+|.|+........ . .......+.++++|+...+.....
T Consensus 105 ~~~~~~v~~~h~~~~~~~~~-----------------~-------~~~~~~~~~~~~~s~~~~~~~~~~----------- 149 (335)
T cd03802 105 PLPVPVVTTLHGPPDPELLK-----------------L-------YYAARPDVPFVSISDAQRRPWPPL----------- 149 (335)
T ss_pred ccCCCEEEEecCCCCcccch-----------------H-------HHhhCcCCeEEEecHHHHhhcccc-----------
Confidence 78999999999875432100 0 123567788999988655432111
Q ss_pred HHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEE
Q 001492 406 LRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILA 485 (1067)
Q Consensus 406 l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~ 485 (1067)
.++.+||||+|.+.|.+.. .+++.|++
T Consensus 150 ----------------~~~~vi~ngvd~~~~~~~~-------------------------------------~~~~~i~~ 176 (335)
T cd03802 150 ----------------PWVATVHNGIDLDDYPFRG-------------------------------------PKGDYLLF 176 (335)
T ss_pred ----------------cccEEecCCcChhhCCCCC-------------------------------------CCCCEEEE
Confidence 2899999999998876422 34568999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCChhhhhccchHHHHHHHHHHHhcC-CCCcEEeCCCCCCCCHH
Q 001492 486 LSRPDPKKNITTLLKAFGECRPLRELANLT-LIMGNRDDIEEMSSGNASVLITVLKLIDKYD-LYGQVAYPKHHKQYDVP 563 (1067)
Q Consensus 486 vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~-lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~-l~~~V~~~g~~~~~dl~ 563 (1067)
+||+.+.||++.+++++... ++. +++|+++..+. +........ +.++|.|+|+++.+++.
T Consensus 177 ~Gr~~~~Kg~~~li~~~~~~-------~~~l~i~G~~~~~~~-----------~~~~~~~~~~~~~~v~~~G~~~~~~~~ 238 (335)
T cd03802 177 LGRISPEKGPHLAIRAARRA-------GIPLKLAGPVSDPDY-----------FYREIAPELLDGPDIEYLGEVGGAEKA 238 (335)
T ss_pred EEeeccccCHHHHHHHHHhc-------CCeEEEEeCCCCHHH-----------HHHHHHHhcccCCcEEEeCCCCHHHHH
Confidence 99999999999999998654 334 48888764322 122222222 56799999999999999
Q ss_pred HHHHHhhcCCcEEEecCC-CCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHH
Q 001492 564 EIYRLAAKTKGVFINPAL-VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLW 642 (1067)
Q Consensus 564 ~ly~~A~~~~dV~v~ps~-~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~ 642 (1067)
.+|+.+ |++++||. .|+||++++||||||+|||+++.||..|++.++.+|+++++ +++++++|.+++..+
T Consensus 239 ~~~~~~----d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~--- 309 (335)
T cd03802 239 ELLGNA----RALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLD--- 309 (335)
T ss_pred HHHHhC----cEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccH---
Confidence 999999 99999997 59999999999999999999999999999999999999986 999999999987654
Q ss_pred HHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Q 001492 643 VECRKNGWKNI-HLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 643 ~~~~~~~~~~~-~~fsw~~~a~~~l~~~~ 670 (1067)
.+++++.+ ++|||+..+++|+++|+
T Consensus 310 ---~~~~~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 310 ---RAACRRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred ---HHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 23455666 69999999999999874
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-31 Score=313.25 Aligned_cols=379 Identities=16% Similarity=0.132 Sum_probs=247.8
Q ss_pred ChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCcccc
Q 001492 191 GGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKE 270 (1067)
Q Consensus 191 GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k~ 270 (1067)
+|.+.++.++|++|+++| |+|+|++.....+. . +.....|+.+++++..+. ....
T Consensus 14 ~~~~~R~~~~a~~L~~~G--~~V~ii~~~~~~~~--------~------------~~~~~~~v~~~~~~~~~~--~~~~- 68 (415)
T cd03816 14 IGRSPRMQYHALSLAKHG--WKVDLVGYLETPPH--------D------------EILSNPNITIHPLPPPPQ--RLNK- 68 (415)
T ss_pred cCCCHHHHHHHHHHHhcC--ceEEEEEecCCCCC--------H------------HHhcCCCEEEEECCCCcc--cccc-
Confidence 356677799999999999 99999987421110 0 011235889988876431 0000
Q ss_pred cccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc---hhHHHHHHHhcCCCcEEEEeCCCchhhHHHHH
Q 001492 271 LLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD---AGDSAALLSGALNVPMVLTGHSLGRNKLEQLL 347 (1067)
Q Consensus 271 ~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~---a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~ 347 (1067)
.+.+..+...++.....+.+.+.. ..+||+||+|... +...+.++++..++|+|++.|+.+....
T Consensus 69 --~~~~~~~~~~~~~~~~~~~~~l~~------~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~---- 136 (415)
T cd03816 69 --LPFLLFAPLKVLWQFFSLLWLLYK------LRPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTIL---- 136 (415)
T ss_pred --chHHHHHHHHHHHHHHHHHHHHHh------cCCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHH----
Confidence 111111111122222222222211 1469999998742 2344555677779999999998753221
Q ss_pred hhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEe
Q 001492 348 KQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVI 427 (1067)
Q Consensus 348 ~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vI 427 (1067)
..+.... ....++.+++ |+..++.||.|||+|+...+.+.+ +. .+..++.||
T Consensus 137 ~~~~~~~---~~~~~~~~~~--e~~~~~~ad~ii~vS~~~~~~l~~-~~----------------------~~~~ki~vI 188 (415)
T cd03816 137 ALKLGEN---HPLVRLAKWY--EKLFGRLADYNLCVTKAMKEDLQQ-FN----------------------NWKIRATVL 188 (415)
T ss_pred hcccCCC---CHHHHHHHHH--HHHHhhcCCEeeecCHHHHHHHHh-hh----------------------ccCCCeeec
Confidence 1111011 1122344444 777899999999999988776643 21 223499999
Q ss_pred CCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhccc
Q 001492 428 PPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRP 507 (1067)
Q Consensus 428 PnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~ 507 (1067)
|||. ...|.+.... ........+.. + ... ... ... ......++..+++++||+.+.||++.+++|+..+++
T Consensus 189 ~Ng~-~~~f~p~~~~-~~~~~~~~~~~--~-~~~-~~~--~~~-~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~ 259 (415)
T cd03816 189 YDRP-PEQFRPLPLE-EKHELFLKLAK--T-FLT-REL--RIG-AVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEK 259 (415)
T ss_pred CCCC-HHHceeCcHH-HHHHHHHhccc--c-ccc-ccc--ccc-cceecCCCceEEEEeccccCCCCHHHHHHHHHHHHH
Confidence 9994 4556554310 00000000000 0 000 000 000 000112344678899999999999999999999853
Q ss_pred c----cCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecC--
Q 001492 508 L----RELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPA-- 580 (1067)
Q Consensus 508 l----~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps-- 580 (1067)
. ...|++.+ |+|+|+. ..++.++++++++.+.+.+.|+++.++++.+|+.| |++|.|+
T Consensus 260 ~~~~~~~~~~i~l~ivG~G~~-----------~~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~a----Dv~v~~~~~ 324 (415)
T cd03816 260 SAATGPKLPKLLCIITGKGPL-----------KEKYLERIKELKLKKVTIRTPWLSAEDYPKLLASA----DLGVSLHTS 324 (415)
T ss_pred hhcccccCCCEEEEEEecCcc-----------HHHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHhC----CEEEEcccc
Confidence 1 12466776 8898875 35567788889987766677899999999999999 9998753
Q ss_pred -CCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcC---HHHHHHHHHHHHHHHHcC
Q 001492 581 -LVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSE---KNLWVECRKNGWKNIHLF 656 (1067)
Q Consensus 581 -~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d---~~~~~~~~~~~~~~~~~f 656 (1067)
..|+||++++||||||+|||+|+.||..|+++++.+|++++ |+++++++|.++++| ++.+++|++++++.. .+
T Consensus 325 ~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~-~~ 401 (415)
T cd03816 325 SSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES-EL 401 (415)
T ss_pred ccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh-hc
Confidence 34789999999999999999999999999999999999994 899999999999999 999999999999887 45
Q ss_pred CHHHH
Q 001492 657 SWPEH 661 (1067)
Q Consensus 657 sw~~~ 661 (1067)
+|..-
T Consensus 402 ~~~~~ 406 (415)
T cd03816 402 RWDEN 406 (415)
T ss_pred CHHHH
Confidence 55443
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-31 Score=304.59 Aligned_cols=285 Identities=24% Similarity=0.273 Sum_probs=220.1
Q ss_pred CCceEEEEcCC--chhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEE
Q 001492 304 VWPYVIHGHYA--DAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVI 381 (1067)
Q Consensus 304 ~~pDvIh~h~~--~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi 381 (1067)
.+||+||+|.. .....+..+++..++|+|++.|+....... ... ...+.......++..+..++.++
T Consensus 86 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~--------~~~~~~~~~~~~~~~~~~~~~i~ 154 (375)
T cd03821 86 READIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWAL---PHK--------ALKKRLAWFLFERRLLQAAAAVH 154 (375)
T ss_pred CCCCEEEEecccchHHHHHHHHHHHhCCCEEEEcccccccccc---ccc--------hhhhHHHHHHHHHHHHhcCCEEE
Confidence 46999999974 345555666777899999999987443210 000 01111222233566788999999
Q ss_pred eCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCC
Q 001492 382 TSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSP 461 (1067)
Q Consensus 382 ~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1067)
+++..........+ +..++.+||||+|...+.+.....
T Consensus 155 ~~s~~~~~~~~~~~------------------------~~~~~~vi~~~~~~~~~~~~~~~~------------------ 192 (375)
T cd03821 155 ATSEQEAAEIRRLG------------------------LKAPIAVIPNGVDIPPFAALPSRG------------------ 192 (375)
T ss_pred ECCHHHHHHHHhhC------------------------CcccEEEcCCCcChhccCcchhhh------------------
Confidence 99976665543322 123899999999998886543100
Q ss_pred CCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHH
Q 001492 462 KAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLK 540 (1067)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~ 540 (1067)
.+..+....++++|+++||+.+.||++.+++|+..+.+ ..+++.+ ++|.++.. +...+..
T Consensus 193 --------~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~--~~~~~~l~i~G~~~~~---------~~~~~~~ 253 (375)
T cd03821 193 --------RRRKFPILPDKRIILFLGRLHPKKGLDLLIEAFAKLAE--RFPDWHLVIAGPDEGG---------YRAELKQ 253 (375)
T ss_pred --------hhhhccCCCCCcEEEEEeCcchhcCHHHHHHHHHHhhh--hcCCeEEEEECCCCcc---------hHHHHHH
Confidence 01222334678899999999999999999999999853 3566665 78876432 2234445
Q ss_pred HHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEe
Q 001492 541 LIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLV 620 (1067)
Q Consensus 541 l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv 620 (1067)
++.++++.++|.|+|+++.+++..+|+.| |++|+||..|+||++++||||||+|||+++.||..+++.+ .+|+++
T Consensus 254 ~~~~~~~~~~v~~~g~~~~~~~~~~~~~a----dv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~ 328 (375)
T cd03821 254 IAAALGLEDRVTFTGMLYGEDKAAALADA----DLFVLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVV 328 (375)
T ss_pred HHHhcCccceEEEcCCCChHHHHHHHhhC----CEEEeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEe
Confidence 56888999999999999999999999999 9999999999999999999999999999999999999988 788888
Q ss_pred CCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHH
Q 001492 621 DPHDQQAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYL 666 (1067)
Q Consensus 621 ~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l 666 (1067)
++ +.++++++|.+++++++.+..+++++++.+ ++|||+..+++|+
T Consensus 329 ~~-~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 329 DD-DVDALAAALRRALELPQRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred CC-ChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 65 569999999999999999999999999996 6999999999886
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-31 Score=304.75 Aligned_cols=385 Identities=22% Similarity=0.288 Sum_probs=271.6
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
||++|+.+.. |..||.+.++..++++|+++| |+|++++.....+....... ..
T Consensus 1 kIl~i~~~~~-----------~~~~G~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~~~~~~~--------------~~ 53 (394)
T cd03794 1 KILILSQYFP-----------PELGGGAFRTTELAEELVKRG--HEVTVITGSPNYPSGKIYKG--------------YK 53 (394)
T ss_pred CEEEEecccC-----------CccCCcceeHHHHHHHHHhCC--ceEEEEecCCCccccccccc--------------ce
Confidence 5889985553 556899999999999999999 99999997543222110000 00
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCC--chhHHHHHHH
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYA--DAGDSAALLS 324 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~--~a~~~a~~l~ 324 (1067)
....+++.+++++..... ....+..+..+ ..........+.. +..+||+||+|.+ .....+..++
T Consensus 54 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~~~~-----~~~~~D~v~~~~~~~~~~~~~~~~~ 120 (394)
T cd03794 54 REEVDGVRVHRVPLPPYK----KNGLLKRLLNY----LSFALSALLALLK-----RRRRPDVIIATSPPLLIALAALLLA 120 (394)
T ss_pred EEecCCeEEEEEecCCCC----ccchHHHHHhh----hHHHHHHHHHHHh-----cccCCCEEEEcCChHHHHHHHHHHH
Confidence 112357888887754331 11110101011 1111111111110 1256999999973 3455566667
Q ss_pred hcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHH
Q 001492 325 GALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEK 404 (1067)
Q Consensus 325 ~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~ 404 (1067)
+..++|+|+++|++++...... +..... ...+++.+++ ++..++.+|.|+++|+...+.+. .+
T Consensus 121 ~~~~~~~i~~~h~~~~~~~~~~---~~~~~~--~~~~~~~~~~--~~~~~~~~d~vi~~s~~~~~~~~-~~--------- 183 (394)
T cd03794 121 RLKGAPFVLEVRDLWPESAVAL---GLLKNG--SLLYRLLRKL--ERLIYRRADAIVVISPGMREYLV-RR--------- 183 (394)
T ss_pred HhcCCCEEEEehhhcchhHHHc---cCcccc--chHHHHHHHH--HHHHHhcCCEEEEECHHHHHHHH-hc---------
Confidence 7779999999999866543222 111111 0112333333 67789999999999998877653 11
Q ss_pred HHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEE
Q 001492 405 VLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMIL 484 (1067)
Q Consensus 405 ~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il 484 (1067)
+.+..++.++|||+|...+.+...... ........+++.|+
T Consensus 184 -------------~~~~~~~~~i~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~i~ 224 (394)
T cd03794 184 -------------GVPPEKISVIPNGVDLELFKPPPADES--------------------------LRKELGLDDKFVVL 224 (394)
T ss_pred -------------CCCcCceEEcCCCCCHHHcCCccchhh--------------------------hhhccCCCCcEEEE
Confidence 112248999999999887765431000 11122345678899
Q ss_pred EEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHH
Q 001492 485 ALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVP 563 (1067)
Q Consensus 485 ~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~ 563 (1067)
++|++.+.||++.+++|+..+.+ . +++.+ ++|+++..+ .+...+...++ ++|.|.|+++.+++.
T Consensus 225 ~~G~~~~~k~~~~l~~~~~~l~~--~-~~~~l~i~G~~~~~~-----------~~~~~~~~~~~-~~v~~~g~~~~~~~~ 289 (394)
T cd03794 225 YAGNIGRAQGLDTLLEAAALLKD--R-PDIRFLIVGDGPEKE-----------ELKELAKALGL-DNVTFLGRVPKEELP 289 (394)
T ss_pred EecCcccccCHHHHHHHHHHHhh--c-CCeEEEEeCCcccHH-----------HHHHHHHHcCC-CcEEEeCCCChHHHH
Confidence 99999999999999999999954 2 56665 788876532 33344444454 579999999999999
Q ss_pred HHHHHhhcCCcEEEecCCCCCC-----CHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcC
Q 001492 564 EIYRLAAKTKGVFINPALVEPF-----GLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSE 638 (1067)
Q Consensus 564 ~ly~~A~~~~dV~v~ps~~Egf-----gltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d 638 (1067)
++|+.| |++++|+..|++ |++++|||+||+|||+++.|+..+++.++.+|+++++.|+++++++|.+++++
T Consensus 290 ~~~~~~----di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~ 365 (394)
T cd03794 290 ELLAAA----DVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDD 365 (394)
T ss_pred HHHHhh----CeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhC
Confidence 999999 999999998876 78899999999999999999999999988899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH-cCCHHHHHHHHH
Q 001492 639 KNLWVECRKNGWKNIH-LFSWPEHCRTYL 666 (1067)
Q Consensus 639 ~~~~~~~~~~~~~~~~-~fsw~~~a~~~l 666 (1067)
++.++++++++++.+. +|||+.++++|+
T Consensus 366 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 366 PEERAEMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred hHHHHHHHHHHHHHHHHhhcHHHHHHhcC
Confidence 9999999999999995 999999998873
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=294.72 Aligned_cols=367 Identities=17% Similarity=0.206 Sum_probs=266.5
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCc
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGI 245 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1067)
++|+|||.|++ |.+||++.++..|++.|-++| |.|.++|..+.+- .++.
T Consensus 1 ~~i~mVsdff~-----------P~~ggveshiy~lSq~li~lg--hkVvvithayg~r-------~gir----------- 49 (426)
T KOG1111|consen 1 SRILMVSDFFY-----------PSTGGVESHIYALSQCLIRLG--HKVVVITHAYGNR-------VGIR----------- 49 (426)
T ss_pred CcceeeCcccc-----------cCCCChhhhHHHhhcchhhcC--CeEEEEeccccCc-------ccee-----------
Confidence 47999999998 889999999999999999999 9999999865321 1222
Q ss_pred cccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCch--hHHHHHH
Q 001492 246 EVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADA--GDSAALL 323 (1067)
Q Consensus 246 ~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a--~~~a~~l 323 (1067)
..++|..++.+|+... -.+..+|.+.... .+++.+.. . .+..|||+|.+.+ +.-+.+.
T Consensus 50 --ylt~glkVyylp~~v~----~n~tT~ptv~~~~-Pllr~i~l-----r--------E~I~ivhghs~fS~lahe~l~h 109 (426)
T KOG1111|consen 50 --YLTNGLKVYYLPAVVG----YNQTTFPTVFSDF-PLLRPILL-----R--------ERIEIVHGHSPFSYLAHEALMH 109 (426)
T ss_pred --eecCCceEEEEeeeee----ecccchhhhhccC-cccchhhh-----h--------hceEEEecCChHHHHHHHHHHH
Confidence 2246788888886322 1122222221111 11111111 1 3589999999743 4446677
Q ss_pred HhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHH
Q 001492 324 SGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLE 403 (1067)
Q Consensus 324 ~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~ 403 (1067)
++.+|..+|+|-|+++--. .+.....+ + .-+..+...|++||+|..-.+.. -+.....|
T Consensus 110 artMGlktVfTdHSlfGfa--------d~~si~~n------~---ll~~sL~~id~~IcVshtskent-vlr~~L~p--- 168 (426)
T KOG1111|consen 110 ARTMGLKTVFTDHSLFGFA--------DIGSILTN------K---LLPLSLANIDRIICVSHTSKENT-VLRGALAP--- 168 (426)
T ss_pred HHhcCceEEEecccccccc--------chhhhhhc------c---eeeeeecCCCcEEEEeecCCCce-EEEeccCH---
Confidence 8889999999999974311 00100000 1 13567889999999887433321 11122222
Q ss_pred HHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEE
Q 001492 404 KVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMI 483 (1067)
Q Consensus 404 ~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I 483 (1067)
.++.+|||.++.+.|.|.+.. ....+...|
T Consensus 169 ------------------~kvsvIPnAv~~~~f~P~~~~--------------------------------~~S~~i~~i 198 (426)
T KOG1111|consen 169 ------------------AKVSVIPNAVVTHTFTPDAAD--------------------------------KPSADIITI 198 (426)
T ss_pred ------------------hHeeeccceeeccccccCccc--------------------------------cCCCCeeEE
Confidence 399999999999999985510 012344789
Q ss_pred EEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCH
Q 001492 484 LALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDV 562 (1067)
Q Consensus 484 l~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl 562 (1067)
+.++||.++||++.+++++.++. ..+|++.+ |+|+||... .+++..+++.++++|.++|.++.+++
T Consensus 199 vv~sRLvyrKGiDll~~iIp~vc--~~~p~vrfii~GDGPk~i-----------~lee~lEk~~l~~rV~~lG~v~h~~V 265 (426)
T KOG1111|consen 199 VVASRLVYRKGIDLLLEIIPSVC--DKHPEVRFIIIGDGPKRI-----------DLEEMLEKLFLQDRVVMLGTVPHDRV 265 (426)
T ss_pred EEEeeeeeccchHHHHHHHHHHH--hcCCCeeEEEecCCcccc-----------hHHHHHHHhhccCceEEecccchHHH
Confidence 99999999999999999999984 67899887 889998643 34567788899999999999999999
Q ss_pred HHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHH
Q 001492 563 PEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLW 642 (1067)
Q Consensus 563 ~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~ 642 (1067)
.+.|..- |||++||+.|.||++++|||+||+|||+|.+||.+|++.+. -++....+++++++++++++..-..-
T Consensus 266 r~vl~~G----~IFlntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d--~i~~~~~~~~dl~~~v~~ai~~~~~~ 339 (426)
T KOG1111|consen 266 RDVLVRG----DIFLNTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED--MITLGEPGPDDLVGAVEKAITKLRTL 339 (426)
T ss_pred HHHHhcC----cEEeccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc--ceeccCCChHHHHHHHHHHHHHhccC
Confidence 9999999 99999999999999999999999999999999999998753 23344557889999988888732111
Q ss_pred HHHHHHHHHHH-HcCCHHHHHHHHHHHHHHhHhcC
Q 001492 643 VECRKNGWKNI-HLFSWPEHCRTYLTRVAACRMRH 676 (1067)
Q Consensus 643 ~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~~~~~ 676 (1067)
-....+.+ +.|+|+..+++.++.|.++....
T Consensus 340 ---p~~~h~~v~~~y~w~dVa~rTekvy~r~~~t~ 371 (426)
T KOG1111|consen 340 ---PLEFHDRVKKMYSWKDVAERTEKVYDRAATTS 371 (426)
T ss_pred ---chhHHHHHHHhccHHHHHHHHHHHHHHHhhcc
Confidence 12223445 48999999999999999887653
|
|
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=309.03 Aligned_cols=347 Identities=16% Similarity=0.180 Sum_probs=244.3
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcC--CCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCC
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARM--PGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDD 243 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~--G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~ 243 (1067)
|||++++.. + +..||+++++.+|+++|.+. | |+|.++++...... . .+
T Consensus 1 mkI~~~~~~-~-----------~~~GG~e~~~~~l~~~L~~~~~g--~~v~v~~~~~~~~~-~--------~~------- 50 (359)
T PRK09922 1 MKIAFIGEA-V-----------SGFGGMETVISNVINTFEESKIN--CEMFFFCRNDKMDK-A--------WL------- 50 (359)
T ss_pred CeeEEeccc-c-----------cCCCchhHHHHHHHHHhhhcCcc--eeEEEEecCCCCCh-H--------HH-------
Confidence 899999742 2 45799999999999999999 7 99999987432100 0 00
Q ss_pred CccccccCCeEE-EeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHH
Q 001492 244 GIEVGESSGAYI-IRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAAL 322 (1067)
Q Consensus 244 ~~~~~~~~gv~i-~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~ 322 (1067)
....+ ..++..+. .++.. + .++.++.+.+.+ .+||+||+|...+...+..
T Consensus 51 -------~~~~~~~~~~~~~~-~~~~~----~----------~~~~~l~~~l~~-------~~~Dii~~~~~~~~~~~~~ 101 (359)
T PRK09922 51 -------KEIKYAQSFSNIKL-SFLRR----A----------KHVYNFSKWLKE-------TQPDIVICIDVISCLYANK 101 (359)
T ss_pred -------Hhcchhcccccchh-hhhcc----c----------HHHHHHHHHHHh-------cCCCEEEEcCHHHHHHHHH
Confidence 00100 00110000 00000 0 011112222222 5799999998766666666
Q ss_pred HHhcCCCc--EEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCch
Q 001492 323 LSGALNVP--MVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDV 400 (1067)
Q Consensus 323 l~~~~giP--~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~ 400 (1067)
+++..++| ++.+.|....... .+. .. .+..+|.++++|+...+.+... +..+
T Consensus 102 ~~~~~~~~~~~~~~~h~~~~~~~----------------~~~-~~-------~~~~~d~~i~~S~~~~~~~~~~--~~~~ 155 (359)
T PRK09922 102 ARKKSGKQFKIFSWPHFSLDHKK----------------HAE-CK-------KITCADYHLAISSGIKEQMMAR--GISA 155 (359)
T ss_pred HHHHhCCCCeEEEEecCcccccc----------------hhh-hh-------hhhcCCEEEEcCHHHHHHHHHc--CCCH
Confidence 66666655 5666775321110 000 01 1378999999999877765432 1122
Q ss_pred HHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCC
Q 001492 401 KLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHK 480 (1067)
Q Consensus 401 ~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1067)
.++.+||||+|.+.+..... ...++
T Consensus 156 ---------------------~ki~vi~N~id~~~~~~~~~----------------------------------~~~~~ 180 (359)
T PRK09922 156 ---------------------QRISVIYNPVEIKTIIIPPP----------------------------------ERDKP 180 (359)
T ss_pred ---------------------HHEEEEcCCCCHHHccCCCc----------------------------------ccCCC
Confidence 38999999999765432110 01346
Q ss_pred cEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCC
Q 001492 481 PMILALSRPD--PKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHH 557 (1067)
Q Consensus 481 ~~Il~vgRld--~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~ 557 (1067)
+.|+++||+. +.||+..+++|+..+. . ++.+ ++|++++. ..+.++++++++.++|.|+|++
T Consensus 181 ~~i~~~Grl~~~~~k~~~~l~~a~~~~~---~--~~~l~ivG~g~~~-----------~~l~~~~~~~~l~~~v~f~G~~ 244 (359)
T PRK09922 181 AVFLYVGRLKFEGQKNVKELFDGLSQTT---G--EWQLHIIGDGSDF-----------EKCKAYSRELGIEQRIIWHGWQ 244 (359)
T ss_pred cEEEEEEEEecccCcCHHHHHHHHHhhC---C--CeEEEEEeCCccH-----------HHHHHHHHHcCCCCeEEEeccc
Confidence 7899999986 4699999999999873 2 4554 88988753 4567788889999999999987
Q ss_pred CC--CCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcC-CCCchhhhccCCceEEeCCCCHHHHHHHHHH
Q 001492 558 KQ--YDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATK-NGGPVDIHRALNNGLLVDPHDQQAIADALLK 634 (1067)
Q Consensus 558 ~~--~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~-~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ 634 (1067)
+. ++++.+|+.| |++|+||.+||||++++||||||+|||+++ .||+.|++.++.+|++++|+|+++++++|.+
T Consensus 245 ~~~~~~~~~~~~~~----d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~ 320 (359)
T PRK09922 245 SQPWEVVQQKIKNV----SALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNK 320 (359)
T ss_pred CCcHHHHHHHHhcC----cEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHH
Confidence 54 6789999999 999999999999999999999999999999 8999999999999999999999999999999
Q ss_pred hhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHh
Q 001492 635 LVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRM 674 (1067)
Q Consensus 635 ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~ 674 (1067)
++++++.+ ......+.+.+|+-+..++++...|..++.
T Consensus 321 l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
T PRK09922 321 VISGEVKY--QHDAIPNSIERFYEVLYFKNLNNALFSKLQ 358 (359)
T ss_pred HHhCcccC--CHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 99999755 223333445788999999999999987754
|
|
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-31 Score=300.76 Aligned_cols=371 Identities=23% Similarity=0.322 Sum_probs=264.1
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
||++++.... |..||.+.++..++++|++.| |+|++++...........
T Consensus 1 kil~~~~~~~-----------p~~~G~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~~~------------------ 49 (374)
T cd03817 1 KIGIFTDTYL-----------PQVNGVATSIRRLAEELEKRG--HEVYVVAPSYPGAPEEEE------------------ 49 (374)
T ss_pred CeeEeehhcc-----------CCCCCeehHHHHHHHHHHHcC--CeEEEEeCCCCCCCcccc------------------
Confidence 5888875443 789999999999999999999 999999975432111000
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCC-chhHHHHHHHh
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYA-DAGDSAALLSG 325 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~-~a~~~a~~l~~ 325 (1067)
..+....+.+... +......+. +...+. ..+. ..+||+||+|.. ..+..+..+++
T Consensus 50 ---~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~-------~~~~-------~~~~Div~~~~~~~~~~~~~~~~~ 105 (374)
T cd03817 50 ---VVVVRPFRVPTFK---YPDFRLPLP----IPRALI-------IILK-------ELGPDIVHTHTPFSLGLLGLRVAR 105 (374)
T ss_pred ---cccccccccccch---hhhhhcccc----HHHHHH-------HHHh-------hcCCCEEEECCchhhhhHHHHHHH
Confidence 0011111110000 000000111 111111 1111 156999999986 34566677788
Q ss_pred cCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHH
Q 001492 326 ALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKV 405 (1067)
Q Consensus 326 ~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~ 405 (1067)
..++|+|++.|+.+....... ..+.... .....+ ..++..+..||.+++.|+...+.+...
T Consensus 106 ~~~~~~i~~~~~~~~~~~~~~-~~~~~~~------~~~~~~-~~~~~~~~~~d~i~~~s~~~~~~~~~~----------- 166 (374)
T cd03817 106 KLGIPVVATYHTMYEDYTHYV-PLGRLLA------RAVVRR-KLSRRFYNRCDAVIAPSEKIADLLREY----------- 166 (374)
T ss_pred HcCCCEEEEecCCHHHHHHHH-hcccchh------HHHHHH-HHHHHHhhhCCEEEeccHHHHHHHHhc-----------
Confidence 889999999999866443222 1111100 011110 246677999999999999866554332
Q ss_pred HHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEE
Q 001492 406 LRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILA 485 (1067)
Q Consensus 406 l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~ 485 (1067)
|.. .++.++|||+|...+.+.... ..+..+...++++.|++
T Consensus 167 -------~~~------~~~~vi~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~i~~ 207 (374)
T cd03817 167 -------GVK------RPIEVIPTGIDLDRFEPVDGD--------------------------DERRKLGIPEDEPVLLY 207 (374)
T ss_pred -------CCC------CceEEcCCccchhccCccchh--------------------------HHHHhcCCCCCCeEEEE
Confidence 111 268999999999887654310 00122233456788999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHH
Q 001492 486 LSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPE 564 (1067)
Q Consensus 486 vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ 564 (1067)
+|++.+.||++.+++++..+.. ..+++.+ ++|+++. ...+..+++++++.++|.|+|+++.+++..
T Consensus 208 ~G~~~~~k~~~~l~~~~~~~~~--~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 274 (374)
T cd03817 208 VGRLAKEKNIDFLIRAFARLLK--EEPDVKLVIVGDGPE-----------REELEELARELGLADRVIFTGFVPREELPD 274 (374)
T ss_pred EeeeecccCHHHHHHHHHHHHH--hCCCeEEEEEeCCch-----------HHHHHHHHHHcCCCCcEEEeccCChHHHHH
Confidence 9999999999999999999853 3466776 7787653 345667777888889999999999999999
Q ss_pred HHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHH
Q 001492 565 IYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVE 644 (1067)
Q Consensus 565 ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~ 644 (1067)
+|+.| |++++|+..|+||++++|||+||+|||+++.|+..+++.++.+|+++++.+. +++++|.+++++++.+++
T Consensus 275 ~~~~a----d~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~~~~~ 349 (374)
T cd03817 275 YYKAA----DLFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPELRRR 349 (374)
T ss_pred HHHHc----CEEEecccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChHHHHH
Confidence 99999 9999999999999999999999999999999999999999999999998887 999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 001492 645 CRKNGWKNIHLFSWPEHCRTYLTRVAA 671 (1067)
Q Consensus 645 ~~~~~~~~~~~fsw~~~a~~~l~~~~~ 671 (1067)
+++++++.+++|+ +++.+.++|++
T Consensus 350 ~~~~~~~~~~~~~---~~~~~~~~~~~ 373 (374)
T cd03817 350 LSKNAEESAEKFS---FAKKVEKLYEE 373 (374)
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHhc
Confidence 9999999997666 55666666553
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-31 Score=304.98 Aligned_cols=379 Identities=16% Similarity=0.113 Sum_probs=244.8
Q ss_pred CceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCC
Q 001492 164 KKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDD 243 (1067)
Q Consensus 164 ~~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~ 243 (1067)
++|||++++.-++ |..+|+.+.+..++..|+++|. |+|+|+++.....+-...|+.....-.+. +.
T Consensus 3 ~~mrIaivTdt~l-----------P~vnGva~s~~~~a~~L~~~G~-heV~vvaP~~~~~~~~~~~~~~~~f~~~~--~~ 68 (462)
T PLN02846 3 KKQHIAIFTTASL-----------PWMTGTAVNPLFRAAYLAKDGD-REVTLVIPWLSLKDQKLVYPNKITFSSPS--EQ 68 (462)
T ss_pred CCCEEEEEEcCCC-----------CCCCCeeccHHHHHHHHHhcCC-cEEEEEecCCccccccccccccccccCch--hh
Confidence 5699999997776 8899999999999999999992 39999998543211011122000000000 00
Q ss_pred CccccccCCeEEEeccCCCCccCcc-----cccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc-hh
Q 001492 244 GIEVGESSGAYIIRIPFGPRDKYLR-----KELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD-AG 317 (1067)
Q Consensus 244 ~~~~~~~~gv~i~ri~~~~~~~~l~-----k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~-a~ 317 (1067)
...+.+..+.+++++|.-+...|-. ...++|. ..+.+.+ .+ .+|||||+|.+. .+
T Consensus 69 e~~~~~~~~~~v~r~~s~~~p~yp~r~~~~~r~~~~~-----~~i~~~l-------~~-------~~pDVIHv~tP~~LG 129 (462)
T PLN02846 69 EAYVRQWLEERISFLPKFSIKFYPGKFSTDKRSILPV-----GDISETI-------PD-------EEADIAVLEEPEHLT 129 (462)
T ss_pred hhhhhhhccCeEEEecccccccCcccccccccccCCh-----HHHHHHH-------Hh-------cCCCEEEEcCchhhh
Confidence 0001111233555655433211111 1111111 1122222 22 579999999984 45
Q ss_pred HH--HHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhc
Q 001492 318 DS--AALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLY 395 (1067)
Q Consensus 318 ~~--a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y 395 (1067)
+. +..+++++++ +|.|.|.-+..+.+.. ..|.....-.....+++++ ..+|.|+++|... +++.+
T Consensus 130 ~~~~g~~~~~k~~~-vV~tyHT~y~~Y~~~~-~~g~~~~~l~~~~~~~~~r--------~~~d~vi~pS~~~-~~l~~-- 196 (462)
T PLN02846 130 WYHHGKRWKTKFRL-VIGIVHTNYLEYVKRE-KNGRVKAFLLKYINSWVVD--------IYCHKVIRLSAAT-QDYPR-- 196 (462)
T ss_pred hHHHHHHHHhcCCc-EEEEECCChHHHHHHh-ccchHHHHHHHHHHHHHHH--------HhcCEEEccCHHH-HHHhh--
Confidence 54 6666766755 8889999654443221 1111111001111122222 2389999999743 32210
Q ss_pred CCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhc
Q 001492 396 DGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFL 475 (1067)
Q Consensus 396 ~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (1067)
.+.+.++|||.+.|.+.... .+. ..
T Consensus 197 ---------------------------~~i~~v~GVd~~~f~~~~~~------~~~----------------------~~ 221 (462)
T PLN02846 197 ---------------------------SIICNVHGVNPKFLEIGKLK------LEQ----------------------QK 221 (462)
T ss_pred ---------------------------CEEecCceechhhcCCCccc------Hhh----------------------hc
Confidence 34455799999988765410 000 00
Q ss_pred cCCC--CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEE
Q 001492 476 TNPH--KPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVA 552 (1067)
Q Consensus 476 ~~~~--~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~ 552 (1067)
...+ .+.++|+||+.+.||++.||+|+..+. ...+++.| |+|+|++. .++++++.++++..++
T Consensus 222 ~~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~--~~~~~~~l~ivGdGp~~-----------~~L~~~a~~l~l~~~v- 287 (462)
T PLN02846 222 NGEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQ--KELSGLEVDLYGSGEDS-----------DEVKAAAEKLELDVRV- 287 (462)
T ss_pred CCCCCcceEEEEEecCcccCCHHHHHHHHHHHH--hhCCCeEEEEECCCccH-----------HHHHHHHHhcCCcEEE-
Confidence 1122 357999999999999999999999884 34466765 99999874 4456788888876444
Q ss_pred eCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHH
Q 001492 553 YPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADAL 632 (1067)
Q Consensus 553 ~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL 632 (1067)
|.|. .+..++|+.+ ||||+||.+|+||++++||||||+|||+++.++ .+++.++.+|++++ |.++++++|
T Consensus 288 f~G~---~~~~~~~~~~----DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai 357 (462)
T PLN02846 288 YPGR---DHADPLFHDY----KVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRAT 357 (462)
T ss_pred ECCC---CCHHHHHHhC----CEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHH
Confidence 7775 3455899999 999999999999999999999999999999998 59999999999994 899999999
Q ss_pred HHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Q 001492 633 LKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 633 ~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~ 672 (1067)
.++++++. ..++..+ .+.|||+..+++|++.|+-.
T Consensus 358 ~~~l~~~~--~~~~~~a---~~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 358 LKALAEEP--APLTDAQ---RHELSWEAATERFLRVADLD 392 (462)
T ss_pred HHHHccCc--hhHHHHH---HHhCCHHHHHHHHHHHhccC
Confidence 99998542 2223322 24899999999999999743
|
|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-31 Score=305.08 Aligned_cols=362 Identities=25% Similarity=0.322 Sum_probs=256.7
Q ss_pred EEEEEecccccccCCcCCCCCC-CCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCc
Q 001492 167 YIVLISLHGLVRGENMELGRDS-DTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGI 245 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~-~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1067)
||++++.+.. | ..||+++|+.+|+++|++.| |.|++++.............
T Consensus 1 ~ili~~~~~~-----------~~~~gG~~~~~~~l~~~L~~~~--~~v~~~~~~~~~~~~~~~~~--------------- 52 (365)
T cd03809 1 RILIDARFLA-----------SRRPTGIGRYARELLRALLKLD--PEEVLLLLPGAPGLLLLPLR--------------- 52 (365)
T ss_pred CEEEechhhh-----------cCCCCcHHHHHHHHHHHHHhcC--CceEEEEecCccccccccch---------------
Confidence 4777764443 4 68999999999999999999 99999988543221110000
Q ss_pred cccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHh
Q 001492 246 EVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSG 325 (1067)
Q Consensus 246 ~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~ 325 (1067)
..... ... ......+.....+......... ..+||+||+++...... +
T Consensus 53 -----~~~~~--~~~------~~~~~~~~~~~~~~~~~~~~~~--------------~~~~Dii~~~~~~~~~~-----~ 100 (365)
T cd03809 53 -----AALRL--LLR------LPRRLLWGLLFLLRAGDRLLLL--------------LLGLDLLHSPHNTAPLL-----R 100 (365)
T ss_pred -----hcccc--ccc------cccccccchhhHHHHHHHHHhh--------------hcCCCeeeecccccCcc-----c
Confidence 00000 000 0111111111111111111111 14699999998754333 6
Q ss_pred cCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHH
Q 001492 326 ALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKV 405 (1067)
Q Consensus 326 ~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~ 405 (1067)
..++|+|+++|++.+....... .. ......+. .++..+..+|.+++.|+...+.+.+.+.. .+
T Consensus 101 ~~~~~~i~~~hd~~~~~~~~~~-----~~----~~~~~~~~--~~~~~~~~~d~~i~~s~~~~~~~~~~~~~-~~----- 163 (365)
T cd03809 101 LRGVPVVVTIHDLIPLRFPEYF-----SP----GFRRYFRR--LLRRALRRADAIITVSEATKRDLLRYLGV-PP----- 163 (365)
T ss_pred CCCCCEEEEeccchhhhCcccC-----CH----HHHHHHHH--HHHHHHHHcCEEEEccHHHHHHHHHHhCc-CH-----
Confidence 6799999999998654422111 10 01112222 25667899999999999888877665542 12
Q ss_pred HHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEE
Q 001492 406 LRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILA 485 (1067)
Q Consensus 406 l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~ 485 (1067)
.++.++|||+|...+.+.... . .......++++.|++
T Consensus 164 ----------------~~~~vi~~~~~~~~~~~~~~~-----------------------~----~~~~~~~~~~~~i~~ 200 (365)
T cd03809 164 ----------------DKIVVIPLGVDPRFRPPPAEA-----------------------E----VLRALYLLPRPYFLY 200 (365)
T ss_pred ----------------HHEEeeccccCccccCCCchH-----------------------H----HHHHhcCCCCCeEEE
Confidence 289999999999877654310 0 111223456789999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHH
Q 001492 486 LSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPE 564 (1067)
Q Consensus 486 vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ 564 (1067)
+||+.+.||++.+++++..+.. ..+++.+ ++|.+..... .....+...++.++|.|+|+++.+++..
T Consensus 201 ~G~~~~~K~~~~~l~~~~~~~~--~~~~~~l~i~G~~~~~~~----------~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 268 (365)
T cd03809 201 VGTIEPRKNLERLLEAFARLPA--KGPDPKLVIVGKRGWLNE----------ELLARLRELGLGDRVRFLGYVSDEELAA 268 (365)
T ss_pred eCCCccccCHHHHHHHHHHHHH--hcCCCCEEEecCCccccH----------HHHHHHHHcCCCCeEEECCCCChhHHHH
Confidence 9999999999999999999964 3334444 7776543211 1222335678889999999999999999
Q ss_pred HHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHH
Q 001492 565 IYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVE 644 (1067)
Q Consensus 565 ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~ 644 (1067)
+|+.| |++++||..|+||++++|||++|+|||+++.|+..|++. .+|+++++.|.++++++|.+++++++.+.+
T Consensus 269 ~~~~~----d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~ 342 (365)
T cd03809 269 LYRGA----RAFVFPSLYEGFGLPVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALAAAIERLLEDPALREE 342 (365)
T ss_pred HHhhh----hhhcccchhccCCCCHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHHHHHHHHhcCHHHHHH
Confidence 99999 999999999999999999999999999999999999985 579999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHH
Q 001492 645 CRKNGWKNIHLFSWPEHCRTYL 666 (1067)
Q Consensus 645 ~~~~~~~~~~~fsw~~~a~~~l 666 (1067)
+++++++.++.|+|+.++++|+
T Consensus 343 ~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 343 LRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred HHHHHHHHHHhCCHHHHHHHHh
Confidence 9999998788999999999886
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-31 Score=300.69 Aligned_cols=268 Identities=24% Similarity=0.304 Sum_probs=218.2
Q ss_pred CCceEEEEcCCc-hhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEe
Q 001492 304 VWPYVIHGHYAD-AGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVIT 382 (1067)
Q Consensus 304 ~~pDvIh~h~~~-a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~ 382 (1067)
.+||+||+|+.. ....+.+.++..++|++++.|+...... . . . ..++..++.+|.+++
T Consensus 78 ~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~------~-------~~~~~~~~~~~~vi~ 136 (355)
T cd03799 78 LGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRS-------P-D------A-------IDLDEKLARADFVVA 136 (355)
T ss_pred cCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccccc-------C-c------h-------HHHHHHHhhCCEEEE
Confidence 469999999874 4445555555568999999996522110 0 0 0 123445789999999
Q ss_pred CCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCC
Q 001492 383 STKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPK 462 (1067)
Q Consensus 383 ~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1067)
+|+...+.+...+. . +..++.+||||+|.+.|.+...
T Consensus 137 ~s~~~~~~l~~~~~-~---------------------~~~~~~vi~~~~d~~~~~~~~~--------------------- 173 (355)
T cd03799 137 ISEYNRQQLIRLLG-C---------------------DPDKIHVVHCGVDLERFPPRPP--------------------- 173 (355)
T ss_pred CCHHHHHHHHHhcC-C---------------------CcccEEEEeCCcCHHHcCCccc---------------------
Confidence 99988887755431 1 2238999999999887754320
Q ss_pred CcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHH
Q 001492 463 AIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKL 541 (1067)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l 541 (1067)
....+++.|+++||+.+.||++.+++++..+.. ..+++.+ ++|+++.. ..+...
T Consensus 174 ------------~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~--~~~~~~l~i~G~~~~~-----------~~~~~~ 228 (355)
T cd03799 174 ------------PPPGEPLRILSVGRLVEKKGLDYLLEALALLKD--RGIDFRLDIVGDGPLR-----------DELEAL 228 (355)
T ss_pred ------------cccCCCeEEEEEeeeccccCHHHHHHHHHHHhh--cCCCeEEEEEECCccH-----------HHHHHH
Confidence 012456789999999999999999999999853 3567776 88887643 445667
Q ss_pred HHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCC------CCCCHHHHHHHHcCCCEEEcCCCCchhhhccCC
Q 001492 542 IDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALV------EPFGLTLIEAAAHGLPMVATKNGGPVDIHRALN 615 (1067)
Q Consensus 542 ~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~------EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~ 615 (1067)
+.++++.++|.|.|+++.+++..+|+.| |++++|+.. |+||++++||||||+|||+++.|+..+++.++.
T Consensus 229 ~~~~~~~~~v~~~g~~~~~~l~~~~~~a----di~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~ 304 (355)
T cd03799 229 IAELGLEDRVTLLGAKSQEEVRELLRAA----DLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGE 304 (355)
T ss_pred HHHcCCCCeEEECCcCChHHHHHHHHhC----CEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCC
Confidence 7788888999999999999999999999 999999998 999999999999999999999999999999988
Q ss_pred ceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHH
Q 001492 616 NGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRT 664 (1067)
Q Consensus 616 ~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~ 664 (1067)
+|+++++.|+++++++|.+++++++.+.++++++++.+ .+|||+..+++
T Consensus 305 ~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 305 TGLLVPPGDPEALADAIERLLDDPELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred ceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 99999999999999999999999999999999999998 59999998865
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-30 Score=299.56 Aligned_cols=356 Identities=22% Similarity=0.227 Sum_probs=250.3
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
||++|+.+. |..||.++++.+|+++|++.| |+|++++.....+... ..
T Consensus 1 kI~~v~~~~------------~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~--~~---------------- 48 (366)
T cd03822 1 RIALVSPYP------------PRKCGIATFTTDLVNALSARG--PDVLVVSVAALYPSLL--YG---------------- 48 (366)
T ss_pred CeEEecCCC------------CCCCcHHHHHHHHHHHhhhcC--CeEEEEEeecccCccc--CC----------------
Confidence 588887432 558999999999999999999 9999998743221110 00
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc------hhHHH
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD------AGDSA 320 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~------a~~~a 320 (1067)
.......... . ... .....+...+.. .+||+||++.+. .....
T Consensus 49 -~~~~~~~~~~-~----------~~~-----~~~~~~~~~~~~--------------~~~dii~~~~~~~~~~~~~~~~~ 97 (366)
T cd03822 49 -GEQEVVRVIV-L----------DNP-----LDYRRAARAIRL--------------SGPDVVVIQHEYGIFGGEAGLYL 97 (366)
T ss_pred -Ccccceeeee-c----------CCc-----hhHHHHHHHHhh--------------cCCCEEEEeeccccccchhhHHH
Confidence 0000111110 0 000 000111111111 469999998731 12222
Q ss_pred HHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCch
Q 001492 321 ALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDV 400 (1067)
Q Consensus 321 ~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~ 400 (1067)
..+.+..++|+|+++|+..... .. . .... .++..++.+|.|+|+|.....++.....
T Consensus 98 ~~~~~~~~~~~i~~~h~~~~~~-------~~-------~---~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~---- 154 (366)
T cd03822 98 LLLLRGLGIPVVVTLHTVLLHE-------PR-------P---GDRA--LLRLLLRRADAVIVMSSELLRALLLRAY---- 154 (366)
T ss_pred HHHHhhcCCCEEEEEecCCccc-------cc-------h---hhhH--HHHHHHhcCCEEEEeeHHHHHHHHhhcC----
Confidence 2223457999999999961110 00 0 0111 1344588999999997444444322111
Q ss_pred HHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCC
Q 001492 401 KLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHK 480 (1067)
Q Consensus 401 ~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1067)
..++.+||||+|...+.+... ........++
T Consensus 155 --------------------~~~~~~i~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~ 185 (366)
T cd03822 155 --------------------PEKIAVIPHGVPDPPAEPPES-----------------------------LKALGGLDGR 185 (366)
T ss_pred --------------------CCcEEEeCCCCcCcccCCchh-----------------------------hHhhcCCCCC
Confidence 138999999999876654320 0111234567
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCC-CC
Q 001492 481 PMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKH-HK 558 (1067)
Q Consensus 481 ~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~-~~ 558 (1067)
+.|+++||+.+.||++.+++|+..+.. ..+++.+ |+|++...... .......++.++++.++|.|+|. ++
T Consensus 186 ~~i~~~G~~~~~K~~~~ll~a~~~~~~--~~~~~~l~i~G~~~~~~~~------~~~~~~~~i~~~~~~~~v~~~~~~~~ 257 (366)
T cd03822 186 PVLLTFGLLRPYKGLELLLEALPLLVA--KHPDVRLLVAGETHPDLER------YRGEAYALAERLGLADRVIFINRYLP 257 (366)
T ss_pred eEEEEEeeccCCCCHHHHHHHHHHHHh--hCCCeEEEEeccCccchhh------hhhhhHhHHHhcCCCCcEEEecCcCC
Confidence 899999999999999999999999853 3566665 77876532111 01111145778899999999987 99
Q ss_pred CCCHHHHHHHhhcCCcEEEecCCCC--CCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhh
Q 001492 559 QYDVPEIYRLAAKTKGVFINPALVE--PFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLV 636 (1067)
Q Consensus 559 ~~dl~~ly~~A~~~~dV~v~ps~~E--gfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll 636 (1067)
.+++..+|+.| |++++|+..| +||++++||||||+|||+++.|+ .+.+.+..+|+++++.|+++++++|.+++
T Consensus 258 ~~~~~~~~~~a----d~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~ 332 (366)
T cd03822 258 DEELPELFSAA----DVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLL 332 (366)
T ss_pred HHHHHHHHhhc----CEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHH
Confidence 99999999999 9999999999 99999999999999999999999 67777788999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 001492 637 SEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 637 ~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~ 670 (1067)
++++.+.++++++++.++.|||+.++++|.++|+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 366 (366)
T cd03822 333 ADPELAQALRARAREYARAMSWERVAERYLRLLA 366 (366)
T ss_pred cChHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhC
Confidence 9999999999999999977999999999998873
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-30 Score=307.20 Aligned_cols=408 Identities=16% Similarity=0.189 Sum_probs=270.4
Q ss_pred ccCCCceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCee--EEEEEecCCCCCCCCCcCCCcccccC
Q 001492 160 DKKEKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVY--RVDLFSRQVSSPEVDWSYGEPAEMLT 237 (1067)
Q Consensus 160 ~~~~~~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~--~V~v~t~~~~~~~~~~~y~~~~e~l~ 237 (1067)
...+++++|+++.++. | ..||.++.+.+.+++|.+.| + .|.++|...+. . +.|.+.
T Consensus 28 ~~~~~~~~v~f~HP~~---------~---~ggG~ERvl~~a~~~l~~~~--~~~~v~iyt~~~d~-~-------~~~~l~ 85 (463)
T PLN02949 28 ARRSRKRAVGFFHPYT---------N---DGGGGERVLWCAVRAIQEEN--PDLDCVIYTGDHDA-S-------PDSLAA 85 (463)
T ss_pred cccCCCcEEEEECCCC---------C---CCCChhhHHHHHHHHHHhhC--CCCeEEEEcCCCCC-C-------HHHHHH
Confidence 3445678999885322 2 35699999999999999998 6 88888875321 1 112111
Q ss_pred CCCCCCCccccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc-h
Q 001492 238 GGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD-A 316 (1067)
Q Consensus 238 ~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~-a 316 (1067)
........++ ...+.++++.. . .|+ ....||++.-+. ..++.+.....++.. ..|||+.-.... .
T Consensus 86 ~~~~~~~i~~--~~~~~~v~l~~--~-~~~-~~~~~~~~t~~~-~~~~~~~l~~~~~~~-------~~p~v~vDt~~~~~ 151 (463)
T PLN02949 86 RARDRFGVEL--LSPPKVVHLRK--R-KWI-EEETYPRFTMIG-QSLGSVYLAWEALCK-------FTPLYFFDTSGYAF 151 (463)
T ss_pred HHHhhcceec--CCCceEEEecc--c-ccc-ccccCCceehHH-HHHHHHHHHHHHHHh-------cCCCEEEeCCCccc
Confidence 0000111111 12234444321 1 233 334566643222 222222222222222 236654433221 1
Q ss_pred hHHHHHHHhcCCCcEEEEeCCCchhh--HHHHHhhCC--------CChh-hhhhHhHHHHhHH--HhhcccccCCEEEeC
Q 001492 317 GDSAALLSGALNVPMVLTGHSLGRNK--LEQLLKQGR--------QSKE-DINSTYKIMRRIE--GEELSLDAAELVITS 383 (1067)
Q Consensus 317 ~~~a~~l~~~~giP~V~t~H~l~~~~--~~~l~~~g~--------~~~~-~i~~~y~~~~ri~--~E~~~l~~Ad~Vi~~ 383 (1067)
++ .+.+..++|+++++|...... ... ...+. .... ......++.++.. .++.+.+.||.|+|+
T Consensus 152 ~~---pl~~~~~~~v~~yvH~p~~~~dm~~~-v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~n 227 (463)
T PLN02949 152 TY---PLARLFGCKVVCYTHYPTISSDMISR-VRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVN 227 (463)
T ss_pred HH---HHHHhcCCcEEEEEeCCcchHHHHHH-HhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 22 122345899999999642211 111 00010 0000 0011111222221 467788999999999
Q ss_pred CHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCC
Q 001492 384 TKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKA 463 (1067)
Q Consensus 384 S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1067)
|+...+.+.+.+.. ..++.+++||+|...+.....
T Consensus 228 S~~t~~~l~~~~~~-----------------------~~~i~vvyp~vd~~~~~~~~~---------------------- 262 (463)
T PLN02949 228 SSWTKSHIEALWRI-----------------------PERIKRVYPPCDTSGLQALPL---------------------- 262 (463)
T ss_pred CHHHHHHHHHHcCC-----------------------CCCeEEEcCCCCHHHcccCCc----------------------
Confidence 99887766544321 127899999999876532110
Q ss_pred cchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc--cCCCcEEE-EEecCCChhhhhccchHHHHHHHH
Q 001492 464 IPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPL--RELANLTL-IMGNRDDIEEMSSGNASVLITVLK 540 (1067)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l--~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~ 540 (1067)
...+++++|+++||+.++||++.+|+||..+.+. ...+++.| |+|++.. .++.++..++.+
T Consensus 263 -----------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~-----~~~~~~~~eL~~ 326 (463)
T PLN02949 263 -----------ERSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRN-----KEDEERLQKLKD 326 (463)
T ss_pred -----------cccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCC-----cccHHHHHHHHH
Confidence 0023457899999999999999999999987431 12356665 7887642 122446778899
Q ss_pred HHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCch-hhhcc---CCc
Q 001492 541 LIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPV-DIHRA---LNN 616 (1067)
Q Consensus 541 l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~-eiv~~---~~~ 616 (1067)
+++++++.++|.|+|.++.+++..+|+.| +++|+|+..|+||++++||||||+|||+++.||+. |++.+ +.+
T Consensus 327 la~~l~L~~~V~f~g~v~~~el~~ll~~a----~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~t 402 (463)
T PLN02949 327 RAKELGLDGDVEFHKNVSYRDLVRLLGGA----VAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQT 402 (463)
T ss_pred HHHHcCCCCcEEEeCCCCHHHHHHHHHhC----cEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcc
Confidence 99999999999999999999999999999 99999999999999999999999999999999985 77765 568
Q ss_pred eEEeCCCCHHHHHHHHHHhhc-CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHh
Q 001492 617 GLLVDPHDQQAIADALLKLVS-EKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRM 674 (1067)
Q Consensus 617 Gllv~p~d~~~la~aL~~ll~-d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~ 674 (1067)
|++++ |+++++++|.++++ +++.+++|++++++.+++|||+..+++|.+.|..++.
T Consensus 403 G~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~~ 459 (463)
T PLN02949 403 GFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRANRFSEQRFNEDFKDAIRPILN 459 (463)
T ss_pred cccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 99984 89999999999998 6788999999999999889999999999999998765
|
|
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-30 Score=293.48 Aligned_cols=372 Identities=27% Similarity=0.343 Sum_probs=268.6
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
||++|+.... |..||...++..|+++|.+.| |+|++++............
T Consensus 1 kI~ii~~~~~-----------~~~~G~~~~~~~l~~~L~~~g--~~v~i~~~~~~~~~~~~~~----------------- 50 (374)
T cd03801 1 KILLVTPEYP-----------PSVGGAERHVLELARALAARG--HEVTVLTPGDGGLPDEEEV----------------- 50 (374)
T ss_pred CeeEEecccC-----------CccCcHhHHHHHHHHHHHhcC--ceEEEEecCCCCCCceeee-----------------
Confidence 5888885543 346999999999999999999 9999999854321110000
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA 326 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~ 326 (1067)
.......... . ...... ...... ...+.+.+.+ .+||+||+|.+........+++.
T Consensus 51 ----~~~~~~~~~~-----~-~~~~~~----~~~~~~---~~~~~~~~~~-------~~~Dii~~~~~~~~~~~~~~~~~ 106 (374)
T cd03801 51 ----GGIVVVRPPP-----L-LRVRRL----LLLLLL---ALRLRRLLRR-------ERFDVVHAHDWLALLAAALAARL 106 (374)
T ss_pred ----cCcceecCCc-----c-cccchh----HHHHHH---HHHHHHHhhh-------cCCcEEEEechhHHHHHHHHHHh
Confidence 0000100000 0 000000 000001 1111111111 46999999998655555567778
Q ss_pred CCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHH
Q 001492 327 LNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVL 406 (1067)
Q Consensus 327 ~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l 406 (1067)
.++|++++.|+......... ......... ..++..+..+|.+++.|+...+.+...+..
T Consensus 107 ~~~~~i~~~h~~~~~~~~~~----------~~~~~~~~~--~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~--------- 165 (374)
T cd03801 107 LGIPLVLTVHGLEFGRPGNE----------LGLLLKLAR--ALERRALRRADRIIAVSEATREELRELGGV--------- 165 (374)
T ss_pred cCCcEEEEeccchhhccccc----------hhHHHHHHH--HHHHHHHHhCCEEEEecHHHHHHHHhcCCC---------
Confidence 89999999999755432110 000111111 235667899999999999888776555432
Q ss_pred HHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEE
Q 001492 407 RARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILAL 486 (1067)
Q Consensus 407 ~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~v 486 (1067)
...++.++|||+|...+.+.. .. ........++++.|+++
T Consensus 166 -------------~~~~~~~i~~~~~~~~~~~~~------~~---------------------~~~~~~~~~~~~~i~~~ 205 (374)
T cd03801 166 -------------PPEKITVIPNGVDTERFRPAP------RA---------------------ARRRLGIPEDEPVILFV 205 (374)
T ss_pred -------------CCCcEEEecCcccccccCccc------hH---------------------HHhhcCCcCCCeEEEEe
Confidence 113899999999998775421 00 00111223567889999
Q ss_pred eCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHH
Q 001492 487 SRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEI 565 (1067)
Q Consensus 487 gRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~l 565 (1067)
|++.+.||++.+++++..+.. ..+++.+ ++|+++. ...+..++.+++..++|.|.|+++.+++..+
T Consensus 206 g~~~~~k~~~~~i~~~~~~~~--~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 272 (374)
T cd03801 206 GRLVPRKGVDLLLEALAKLRK--EYPDVRLVIVGDGPL-----------REELEALAAELGLGDRVTFLGFVPDEDLPAL 272 (374)
T ss_pred cchhhhcCHHHHHHHHHHHhh--hcCCeEEEEEeCcHH-----------HHHHHHHHHHhCCCcceEEEeccChhhHHHH
Confidence 999999999999999999853 3467776 7786543 3455566778888899999999999999999
Q ss_pred HHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHH
Q 001492 566 YRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVEC 645 (1067)
Q Consensus 566 y~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~ 645 (1067)
|+.| |++++|+..|++|++++|||++|+|||+++.++..+++.++.+|+++++.|+++++++|.+++++++.+.++
T Consensus 273 ~~~~----di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 348 (374)
T cd03801 273 YAAA----DVFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPELRRRL 348 (374)
T ss_pred HHhc----CEEEecchhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcChHHHHHH
Confidence 9999 999999999999999999999999999999999999999899999999999999999999999999999999
Q ss_pred HHHHHHHH-HcCCHHHHHHHHHHHHH
Q 001492 646 RKNGWKNI-HLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 646 ~~~~~~~~-~~fsw~~~a~~~l~~~~ 670 (1067)
++++++.+ +.|+|+.+++++.++|+
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (374)
T cd03801 349 GEAARERVAERFSWDRVAARTEEVYY 374 (374)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHhhC
Confidence 99999777 69999999999998763
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-31 Score=302.54 Aligned_cols=335 Identities=21% Similarity=0.232 Sum_probs=241.8
Q ss_pred CCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCcc
Q 001492 189 DTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLR 268 (1067)
Q Consensus 189 ~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~ 268 (1067)
..||.++++.+++++|++.| |+|++++....... +.. .....++.+++++....
T Consensus 10 ~~GG~~~~~~~l~~~L~~~~--~~v~~i~~~~~~~~----~~~---------------~~~~~~~~~~~~~~~~~----- 63 (358)
T cd03812 10 NRGGIETFIMNYYRNLDRSK--IQFDFLVTSKEEGD----YDD---------------EIEKLGGKIYYIPARKK----- 63 (358)
T ss_pred CCccHHHHHHHHHHhcCccc--eEEEEEEeCCCCcc----hHH---------------HHHHcCCeEEEecCCCc-----
Confidence 48999999999999999999 99999997432110 000 01123666666442111
Q ss_pred cccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcCCCcE-EEEeCCCchhhHHHHH
Q 001492 269 KELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPM-VLTGHSLGRNKLEQLL 347 (1067)
Q Consensus 269 k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~giP~-V~t~H~l~~~~~~~l~ 347 (1067)
..+ .+...+.. .+.+ .+||+||+|......++..+.+..+.|. +++.|+......
T Consensus 64 --~~~----~~~~~~~~-------~~~~-------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---- 119 (358)
T cd03812 64 --NPL----KYFKKLYK-------LIKK-------NKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHD---- 119 (358)
T ss_pred --cHH----HHHHHHHH-------HHhc-------CCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEecccccccc----
Confidence 111 11111111 1111 5699999999876666666666677776 678887643221
Q ss_pred hhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEe
Q 001492 348 KQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVI 427 (1067)
Q Consensus 348 ~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vI 427 (1067)
.... .... ...+...+..++.++++|+...+.+.... . ..++.+|
T Consensus 120 ---~~~~-----~~~~---~~~~~~~~~~~~~~i~~s~~~~~~~~~~~---~---------------------~~~~~vi 164 (358)
T cd03812 120 ---KKKK-----ILKY---KVLRKLINRLATDYLACSEEAGKWLFGKV---K---------------------NKKFKVI 164 (358)
T ss_pred ---ccch-----hhHH---HHHHHHHHhcCCEEEEcCHHHHHHHHhCC---C---------------------cccEEEE
Confidence 0000 0000 11245568889999999998777654431 1 1389999
Q ss_pred CCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhccc
Q 001492 428 PPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRP 507 (1067)
Q Consensus 428 PnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~ 507 (1067)
|||+|.+.|.+.... ...+......++++.|+++||+.+.||++.+++|+..+.
T Consensus 165 ~ngvd~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~- 218 (358)
T cd03812 165 PNGIDLEKFIFNEEI-------------------------RKKRRELGILEDKFVIGHVGRFSEQKNHEFLIEIFAELL- 218 (358)
T ss_pred eccCcHHHcCCCchh-------------------------hhHHHHcCCCCCCEEEEEEeccccccChHHHHHHHHHHH-
Confidence 999999887654310 000122234567889999999999999999999999995
Q ss_pred ccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCC
Q 001492 508 LRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFG 586 (1067)
Q Consensus 508 l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~Egfg 586 (1067)
+..+++.+ |+|+++. ...+...++++++.++|.|+|+ .+++..+|+.| |++|+||..|+||
T Consensus 219 -~~~~~~~l~ivG~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a----di~v~ps~~E~~~ 280 (358)
T cd03812 219 -KKNPNAKLLLVGDGEL-----------EEEIKKKVKELGLEDKVIFLGV--RNDVPELLQAM----DVFLFPSLYEGLP 280 (358)
T ss_pred -HhCCCeEEEEEeCCch-----------HHHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhc----CEEEecccccCCC
Confidence 34577776 8898874 2455677788899999999998 78999999999 9999999999999
Q ss_pred HHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 001492 587 LTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNI 653 (1067)
Q Consensus 587 ltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~ 653 (1067)
++++||||+|+|||+|+.||..+++.+ ..|++..+.++++++++|.+++++|+.++.+...+....
T Consensus 281 ~~~lEAma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~~~~~~~~~~~~~~~~~~ 346 (358)
T cd03812 281 LVLIEAQASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILKLKSEDRRERSSESIKKKGL 346 (358)
T ss_pred HHHHHHHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHHHHhCcchhhhhhhhhhccc
Confidence 999999999999999999999999988 566777777899999999999999999888877776654
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-30 Score=294.52 Aligned_cols=351 Identities=23% Similarity=0.274 Sum_probs=255.2
Q ss_pred CChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCccc
Q 001492 190 TGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRK 269 (1067)
Q Consensus 190 ~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k 269 (1067)
.||.++++..|+++|.+.| |+|.+++.....+. . ..+ ...++.++.++....
T Consensus 11 ~gG~~~~~~~l~~~l~~~~--~~v~~~~~~~~~~~-----~---~~~------------~~~~i~v~~~~~~~~------ 62 (365)
T cd03807 11 VGGAERMLVRLLKGLDRDR--FEHVVISLTDRGEL-----G---EEL------------EEAGVPVYCLGKRPG------ 62 (365)
T ss_pred CccHHHHHHHHHHHhhhcc--ceEEEEecCcchhh-----h---HHH------------HhcCCeEEEEecccc------
Confidence 4999999999999999999 99999986421110 0 000 113667766654211
Q ss_pred ccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc-CCCcEEEEeCCCchhhHHHHHh
Q 001492 270 ELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA-LNVPMVLTGHSLGRNKLEQLLK 348 (1067)
Q Consensus 270 ~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~-~giP~V~t~H~l~~~~~~~l~~ 348 (1067)
+... .+...+.. .+.+ .+||+||+|.......+...... .++|++++.|+......
T Consensus 63 ---~~~~-~~~~~~~~-------~~~~-------~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----- 119 (365)
T cd03807 63 ---RPDP-GALLRLYK-------LIRR-------LRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG----- 119 (365)
T ss_pred ---cccH-HHHHHHHH-------HHHh-------hCCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc-----
Confidence 1111 11111221 1211 46999999977555555555554 68999999998754321
Q ss_pred hCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeC
Q 001492 349 QGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIP 428 (1067)
Q Consensus 349 ~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIP 428 (1067)
+. ...+... .++.....++.+++.|+...+.+... ++.. .++.++|
T Consensus 120 -~~--------~~~~~~~--~~~~~~~~~~~~i~~s~~~~~~~~~~--~~~~---------------------~~~~vi~ 165 (365)
T cd03807 120 -KK--------STRLVAR--LRRLLSSFIPLIVANSAAAAEYHQAI--GYPP---------------------KKIVVIP 165 (365)
T ss_pred -ch--------hHhHHHH--HHHHhccccCeEEeccHHHHHHHHHc--CCCh---------------------hheeEeC
Confidence 00 0111111 24456788999999998777665432 2222 3889999
Q ss_pred CCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc
Q 001492 429 PGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPL 508 (1067)
Q Consensus 429 nGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l 508 (1067)
||+|...+.+... .....+..+..+++.++|+++||+.+.||++.+++|+..+.+
T Consensus 166 ~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~- 220 (365)
T cd03807 166 NGVDTERFSPDLD------------------------ARARLREELGLPEDTFLIGIVARLHPQKDHATLLRAAALLLK- 220 (365)
T ss_pred CCcCHHhcCCccc------------------------chHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHHHHHHH-
Confidence 9999887765431 001112233445677899999999999999999999999853
Q ss_pred cCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHH-hcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCC
Q 001492 509 RELANLTL-IMGNRDDIEEMSSGNASVLITVLKLID-KYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFG 586 (1067)
Q Consensus 509 ~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~-~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~Egfg 586 (1067)
..+++.+ ++|.++.... +..... .+++.++|.|.|. .+++..+|+.| |++++|+..|+||
T Consensus 221 -~~~~~~l~i~G~~~~~~~-----------~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a----di~v~ps~~e~~~ 282 (365)
T cd03807 221 -KFPNARLLLVGDGPDRAN-----------LELLALKELGLEDKVILLGE--RSDVPALLNAL----DVFVLSSLSEGFP 282 (365)
T ss_pred -hCCCeEEEEecCCcchhH-----------HHHHHHHhcCCCceEEEccc--cccHHHHHHhC----CEEEeCCccccCC
Confidence 3567776 7787654322 223333 7788889999996 57899999999 9999999999999
Q ss_pred HHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHH
Q 001492 587 LTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTY 665 (1067)
Q Consensus 587 ltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~ 665 (1067)
++++|||+||+|||+++.|+..+++.+ +|+++++.|+++++++|.+++++++.+.++++++++.+ +.|||+..+++|
T Consensus 283 ~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 360 (365)
T cd03807 283 NVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALLADPALRQALGEAARERIEENFSIEAMVEAY 360 (365)
T ss_pred cHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 999999999999999999999999986 89999999999999999999999999999999999998 589999999999
Q ss_pred HHHHH
Q 001492 666 LTRVA 670 (1067)
Q Consensus 666 l~~~~ 670 (1067)
.++|+
T Consensus 361 ~~~y~ 365 (365)
T cd03807 361 EELYR 365 (365)
T ss_pred HHHhC
Confidence 99873
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-32 Score=296.32 Aligned_cols=244 Identities=23% Similarity=0.393 Sum_probs=183.2
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||.+.+......+.+.++...+ .++ .|+++|||++.++.+++.+.+++ .||++||++|++||+..
T Consensus 4 ll~sDlD~Tl~~~~~~~~~~l~~~l~~~~~----~~~-~~v~~TGRs~~~~~~~~~~~~l~--~Pd~~I~svGt~I~~~~ 76 (247)
T PF05116_consen 4 LLASDLDGTLIDGDDEALARLEELLEQQAR----PEI-LFVYVTGRSLESVLRLLREYNLP--QPDYIITSVGTEIYYGE 76 (247)
T ss_dssp EEEEETBTTTBHCHHHHHHHHHHHHHHHHC----CGE-EEEEE-SS-HHHHHHHHHHCT-E--E-SEEEETTTTEEEESS
T ss_pred EEEEECCCCCcCCCHHHHHHHHHHHHHhhC----CCc-eEEEECCCCHHHHHHHHHhCCCC--CCCEEEecCCeEEEEcC
Confidence 667799999874444556677777762223 348 89999999999999999998885 49999999999999953
Q ss_pred CCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCCchHHHHHH
Q 001492 859 TYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDL 938 (1067)
Q Consensus 859 ~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~el 938 (1067)
.+.+|..|..+|.+.|..+.+.+.+.++++...+. ...++.+|++|++........+++|
T Consensus 77 -------~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q~-------------~~~q~~~k~sy~~~~~~~~~~~~~i 136 (247)
T PF05116_consen 77 -------NWQPDEEWQAHIDERWDRERVEEILAELPGLRPQP-------------ESEQRPFKISYYVDPDDSADILEEI 136 (247)
T ss_dssp -------TTEE-HHHHHHHHTT--HHHHHHHHHCHCCEEEGG-------------CCCGCCTCECEEEETTSHCHHHHHH
T ss_pred -------CCcChHHHHHHHHhcCChHHHHHHHHHhhCcccCC-------------ccccCCeeEEEEEecccchhHHHHH
Confidence 46688999999999999999998888877644333 2346688999999766655558899
Q ss_pred HHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCccc
Q 001492 939 RQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEK 1018 (1067)
Q Consensus 939 ~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~ 1018 (1067)
++.+...+.+++++++++. ++||+|.++|||.||+||+++|+++++++++ +|||+| | ++||....+||+|+||.+.
T Consensus 137 ~~~l~~~~l~~~~i~s~~~-~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~-aGDSgN-D-~~mL~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 137 RARLRQRGLRVNVIYSNGR-DLDILPKGASKGAALRYLMERWGIPPEQVLV-AGDSGN-D-LEMLEGGDHGVVVGNAQPE 212 (247)
T ss_dssp HHHHHCCTCEEEEEECTCC-EEEEEETT-SHHHHHHHHHHHHT--GGGEEE-EESSGG-G-HHHHCCSSEEEE-TTS-HH
T ss_pred HHHHHHcCCCeeEEEccce-eEEEccCCCCHHHHHHHHHHHhCCCHHHEEE-EeCCCC-c-HHHHcCcCCEEEEcCCCHH
Confidence 9999999999999998875 9999999999999999999999999999999 999999 9 9999999999999999943
Q ss_pred chhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhhcc
Q 001492 1019 GSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVGK 1062 (1067)
Q Consensus 1019 ~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g~ 1062 (1067)
. ++.... -....+++ |.+....++||.++|+|||+
T Consensus 213 ~--~~~~~~------~~~~~~~i-y~a~~~~a~GIlegl~~~~~ 247 (247)
T PF05116_consen 213 L--LSWLLE------KLRQQERI-YFAQGPYAAGILEGLQHFGF 247 (247)
T ss_dssp H--HHHHHH------CC-TTE---EE-SS-THHHHHHHHHHTTT
T ss_pred H--HHHHHH------hcccCCce-EecCCCCcHHHHHHHHHcCC
Confidence 0 111110 01122334 45567779999999999986
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-30 Score=292.98 Aligned_cols=344 Identities=23% Similarity=0.280 Sum_probs=250.0
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
||++++.... + .||.++++.+|+++|.+.| |+|++++..... ...
T Consensus 1 kI~i~~~~~~-----------~-~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~---~~~------------------ 45 (348)
T cd03820 1 KILFVIPSLG-----------N-AGGAERVLSNLANALAEKG--HEVTIISLDKGE---PPF------------------ 45 (348)
T ss_pred CeEEEecccc-----------C-CCChHHHHHHHHHHHHhCC--CeEEEEecCCCC---CCc------------------
Confidence 5777774332 3 8999999999999999999 999999985422 000
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA 326 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~ 326 (1067)
....+++.+..++..... ..+..+ .+...+. +.+. ..+||+||++...... ......
T Consensus 46 ~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~~-------~~l~-------~~~~d~i~~~~~~~~~--~~~~~~ 102 (348)
T cd03820 46 YELDPKIKVIDLGDKRDS------KLLARF-KKLRRLR-------KLLK-------NNKPDVVISFLTSLLT--FLASLG 102 (348)
T ss_pred cccCCccceeeccccccc------chhccc-cchHHHH-------Hhhc-------ccCCCEEEEcCchHHH--HHHHHh
Confidence 011235666665542210 000000 0111111 1111 1569999999875212 222222
Q ss_pred CC-CcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHH
Q 001492 327 LN-VPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKV 405 (1067)
Q Consensus 327 ~g-iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~ 405 (1067)
.+ +|++++.|+......... .....++..++.+|.+++.|+.........
T Consensus 103 ~~~~~~i~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~----------- 153 (348)
T cd03820 103 LKIVKLIVSEHNSPDAYKKRL------------------RRLLLRRLLYRRADAVVVLTEEDRALYYKK----------- 153 (348)
T ss_pred hccccEEEecCCCccchhhhh------------------HHHHHHHHHHhcCCEEEEeCHHHHHHhhcc-----------
Confidence 34 599999998643221100 000025667899999999999765221111
Q ss_pred HHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEE
Q 001492 406 LRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILA 485 (1067)
Q Consensus 406 l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~ 485 (1067)
+..++.++|||++...+.+. ...+++.|++
T Consensus 154 --------------~~~~~~vi~~~~~~~~~~~~------------------------------------~~~~~~~i~~ 183 (348)
T cd03820 154 --------------FNKNVVVIPNPLPFPPEEPS------------------------------------SDLKSKRILA 183 (348)
T ss_pred --------------CCCCeEEecCCcChhhcccc------------------------------------CCCCCcEEEE
Confidence 11389999999998765432 0245678999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHH
Q 001492 486 LSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPE 564 (1067)
Q Consensus 486 vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ 564 (1067)
+|++.+.||++.+++|+..+.+ ..+++.+ |+|+++.. ..+.+++..+++.++|.|.|. .+++..
T Consensus 184 ~g~~~~~K~~~~l~~~~~~l~~--~~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~v~~~g~--~~~~~~ 248 (348)
T cd03820 184 VGRLVPQKGFDLLIEAWAKIAK--KHPDWKLRIVGDGPER-----------EALEALIKELGLEDRVILLGF--TKNIEE 248 (348)
T ss_pred EEeeccccCHHHHHHHHHHHHh--cCCCeEEEEEeCCCCH-----------HHHHHHHHHcCCCCeEEEcCC--cchHHH
Confidence 9999999999999999999953 4567776 78887653 344567788899999999998 789999
Q ss_pred HHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCC-CCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHH
Q 001492 565 IYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKN-GGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWV 643 (1067)
Q Consensus 565 ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~-Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~ 643 (1067)
+|+.| |++++||..|+||++++|||+||+|||+++. ++..+++.++.+|+++++.|+++++++|.+++++|+.++
T Consensus 249 ~~~~a----d~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~ 324 (348)
T cd03820 249 YYAKA----SIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDEELRK 324 (348)
T ss_pred HHHhC----CEEEeCccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCHHHHH
Confidence 99999 9999999999999999999999999999986 457788887779999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHH
Q 001492 644 ECRKNGWKNIHLFSWPEHCRTYL 666 (1067)
Q Consensus 644 ~~~~~~~~~~~~fsw~~~a~~~l 666 (1067)
++++++++.++.|+|+.++++|.
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 325 RMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred HHHHHHHHHHHHhCHHHHHHHhc
Confidence 99999977778999999999885
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-30 Score=295.36 Aligned_cols=345 Identities=23% Similarity=0.256 Sum_probs=243.0
Q ss_pred CChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCccc
Q 001492 190 TGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRK 269 (1067)
Q Consensus 190 ~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k 269 (1067)
.||.++++.+|+++|.++| |+|++++.... +.. . .. .....++.++....
T Consensus 11 ~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~-~~~-----~---~~-------------~~~~~~~~~~~~~~------ 60 (360)
T cd04951 11 LGGAEKQVVDLADQFVAKG--HQVAIISLTGE-SEV-----K---PP-------------IDATIILNLNMSKN------ 60 (360)
T ss_pred CCCHHHHHHHHHHhcccCC--ceEEEEEEeCC-CCc-----c---ch-------------hhccceEEeccccc------
Confidence 7899999999999999999 99999986321 100 0 00 00111112222110
Q ss_pred ccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc-CCCcEEEEeCCCchhhHHHHHh
Q 001492 270 ELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA-LNVPMVLTGHSLGRNKLEQLLK 348 (1067)
Q Consensus 270 ~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~-~giP~V~t~H~l~~~~~~~l~~ 348 (1067)
.+..+ . .+..+.+.+.+ .+||+||+|...+..++.++... .++|+|+|.|+......
T Consensus 61 --~~~~~----~----~~~~~~~~~~~-------~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~----- 118 (360)
T cd04951 61 --PLSFL----L----ALWKLRKILRQ-------FKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGR----- 118 (360)
T ss_pred --chhhH----H----HHHHHHHHHHh-------cCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhH-----
Confidence 11111 1 11111122222 56999999987665555554443 46899999998642110
Q ss_pred hCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeC
Q 001492 349 QGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIP 428 (1067)
Q Consensus 349 ~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIP 428 (1067)
...+.. +.....++.++++|+...+.+..... .+..++.+||
T Consensus 119 -----------~~~~~~-----~~~~~~~~~~~~~s~~~~~~~~~~~~----------------------~~~~~~~~i~ 160 (360)
T cd04951 119 -----------LRMLAY-----RLTDFLSDLTTNVSKEALDYFIASKA----------------------FNANKSFVVY 160 (360)
T ss_pred -----------HHHHHH-----HHHhhccCceEEEcHHHHHHHHhccC----------------------CCcccEEEEc
Confidence 011111 22334577788888877666543321 1224899999
Q ss_pred CCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc
Q 001492 429 PGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPL 508 (1067)
Q Consensus 429 nGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l 508 (1067)
||+|...|.+... ........+...+++++++++||+.+.||++.+++|+..+.
T Consensus 161 ng~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li~a~~~l~-- 214 (360)
T cd04951 161 NGIDTDRFRKDPA------------------------RRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLL-- 214 (360)
T ss_pred cccchhhcCcchH------------------------HHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHHHHHHHHHH--
Confidence 9999887754321 01112233334567789999999999999999999999885
Q ss_pred cCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCH
Q 001492 509 RELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGL 587 (1067)
Q Consensus 509 ~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~Egfgl 587 (1067)
...+++.+ |+|+++.. ..+.+.+..+++.++|.|+|. .+++..+|+.| |++|+||..|+||+
T Consensus 215 ~~~~~~~l~i~G~g~~~-----------~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a----d~~v~~s~~e~~~~ 277 (360)
T cd04951 215 SDYLDIKLLIAGDGPLR-----------ATLERLIKALGLSNRVKLLGL--RDDIAAYYNAA----DLFVLSSAWEGFGL 277 (360)
T ss_pred hhCCCeEEEEEcCCCcH-----------HHHHHHHHhcCCCCcEEEecc--cccHHHHHHhh----ceEEecccccCCCh
Confidence 34467776 78887643 345567777888889999997 47899999999 99999999999999
Q ss_pred HHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhc-CHHHHHHHHHHHHHHH-HcCCHHHHHHHH
Q 001492 588 TLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVS-EKNLWVECRKNGWKNI-HLFSWPEHCRTY 665 (1067)
Q Consensus 588 tllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~-d~~~~~~~~~~~~~~~-~~fsw~~~a~~~ 665 (1067)
+++||||+|+|||+++.|+..|++.+ +|++++++|+++++++|.++++ +++.+..++++ ++.+ +.|||+.++++|
T Consensus 278 ~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~ 354 (360)
T cd04951 278 VVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDPEALANKIDEILKMSGEERDIIGAR-RERIVKKFSINSIVQQW 354 (360)
T ss_pred HHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHH-HHHHHHhcCHHHHHHHH
Confidence 99999999999999999999999875 8999999999999999999995 66666666665 6666 699999999999
Q ss_pred HHHHH
Q 001492 666 LTRVA 670 (1067)
Q Consensus 666 l~~~~ 670 (1067)
+++|.
T Consensus 355 ~~~y~ 359 (360)
T cd04951 355 LTLYT 359 (360)
T ss_pred HHHhh
Confidence 99985
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-31 Score=306.50 Aligned_cols=367 Identities=14% Similarity=0.133 Sum_probs=228.5
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCc
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGI 245 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1067)
|||++|.... ..||+++.+.+|++.|.+.| |+|.++......+...
T Consensus 1 mkil~i~~~l-------------~~GGaeri~~~L~~~l~~~G--~~~~i~~~~~~~~~~~------------------- 46 (405)
T PRK10125 1 MNILQFNVRL-------------AEGGAAGVALDLHQRALQQG--LASHFVYGYGKGGKES------------------- 46 (405)
T ss_pred CeEEEEEeee-------------cCCchhHHHHHHHHHHHhcC--CeEEEEEecCCCcccc-------------------
Confidence 8999997422 27999999999999999999 9999987643222110
Q ss_pred cccccCCeE-EEeccCCCCccCcccccccchhH---HHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchh---H
Q 001492 246 EVGESSGAY-IIRIPFGPRDKYLRKELLWPYIQ---EFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAG---D 318 (1067)
Q Consensus 246 ~~~~~~gv~-i~ri~~~~~~~~l~k~~l~~~l~---~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~---~ 318 (1067)
.....+. ++.+ +++ +... -++. .|-...+..+....+.+.+ ..+|||||.|....+ .
T Consensus 47 --~~~~~~~~~~~~--~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~------~~~pDviHlH~~~~~~~~~ 110 (405)
T PRK10125 47 --VSHQNYPQVIKH--TPR--MTAM----ANIALFRLFNRDLFGNFNELYRTITR------TPGPVVLHFHVLHSYWLNL 110 (405)
T ss_pred --cccCCcceEEEe--ccc--HHHH----HHHHHHHhcchhhcchHHHHHHHHhh------ccCCCEEEEecccCceecH
Confidence 0001111 1111 111 0000 0000 0000111111121222211 267999999975332 2
Q ss_pred H--HH----HHHhcCCCcEEEEeCCCchhh-----------HHHHHhhC-C---CChhhhhhHhH-HHHhHHHhhccccc
Q 001492 319 S--AA----LLSGALNVPMVLTGHSLGRNK-----------LEQLLKQG-R---QSKEDINSTYK-IMRRIEGEELSLDA 376 (1067)
Q Consensus 319 ~--a~----~l~~~~giP~V~t~H~l~~~~-----------~~~l~~~g-~---~~~~~i~~~y~-~~~ri~~E~~~l~~ 376 (1067)
. .. +..+..++|+|+|+|+.|.-. +..-...- . .+....+...+ +.++...-+..++.
T Consensus 111 ~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d~~~~~~~~k~~~~~~~~~~ 190 (405)
T PRK10125 111 KSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVDRAHQLVAGKRQLFREMLAL 190 (405)
T ss_pred HHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccchHHHHHHHHHHHHHHHhhc
Confidence 1 11 112345799999999987431 11100000 0 00000111101 11111112233456
Q ss_pred CCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCC
Q 001492 377 AELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGT 456 (1067)
Q Consensus 377 Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~ 456 (1067)
++.+|++|+...+.+...+.. .++.|||||||++.+.+.....
T Consensus 191 ~~~iV~~S~~l~~~~~~~~~~------------------------~~i~vI~NGid~~~~~~~~~~~------------- 233 (405)
T PRK10125 191 GCQFISPSQHVADAFNSLYGP------------------------GRCRIINNGIDMATEAILAELP------------- 233 (405)
T ss_pred CcEEEEcCHHHHHHHHHHcCC------------------------CCEEEeCCCcCccccccccccc-------------
Confidence 789999999887765443321 2899999999975432211000
Q ss_pred CCCCCCCcchhhHhhhhhccCCCCcEEEEEeC-C-CCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchH
Q 001492 457 DGSSPKAIPAIWSDVMRFLTNPHKPMILALSR-P-DPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNAS 533 (1067)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgR-l-d~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~ 533 (1067)
.....+++++|+++|| + .+.||+..+++|+..+. +++.| ++|+++...
T Consensus 234 ----------------~~~~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~-----~~~~L~ivG~g~~~~-------- 284 (405)
T PRK10125 234 ----------------PVRETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG-----DKIELHTFGKFSPFT-------- 284 (405)
T ss_pred ----------------ccccCCCCCEEEEEEeccccCCccHHHHHHHHHhCC-----CCeEEEEEcCCCccc--------
Confidence 0001246788999999 4 46799999999999873 24555 788764210
Q ss_pred HHHHHHHHHHhcCCCCcEEeCCCC-CCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhc
Q 001492 534 VLITVLKLIDKYDLYGQVAYPKHH-KQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHR 612 (1067)
Q Consensus 534 ~~~~i~~l~~~~~l~~~V~~~g~~-~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~ 612 (1067)
...|.++|+. +..++.++|+.| |+||+||.+|+||++++||||||+|||+|+.||+.|++.
T Consensus 285 --------------~~~v~~~g~~~~~~~l~~~y~~a----DvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~ 346 (405)
T PRK10125 285 --------------AGNVVNHGFETDKRKLMSALNQM----DALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQ 346 (405)
T ss_pred --------------ccceEEecCcCCHHHHHHHHHhC----CEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEe
Confidence 1357888876 446899999999 999999999999999999999999999999999999997
Q ss_pred cCCceEEeCCCCHHHHHHHHHHhhcCHHHHHH----HHHHHHHHH-HcCCHHHHHHHHHHHHHHh
Q 001492 613 ALNNGLLVDPHDQQAIADALLKLVSEKNLWVE----CRKNGWKNI-HLFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 613 ~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~----~~~~~~~~~-~~fsw~~~a~~~l~~~~~~ 672 (1067)
+. +|++|+|.|+++||+++ +++..++ +..++++.+ +.|||+.++++|+++|+++
T Consensus 347 ~~-~G~lv~~~d~~~La~~~-----~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 347 KS-GGKTVSEEEVLQLAQLS-----KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred CC-cEEEECCCCHHHHHhcc-----CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 64 89999999999999854 4443333 234577776 5899999999999999753
|
|
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-30 Score=304.83 Aligned_cols=375 Identities=17% Similarity=0.197 Sum_probs=248.0
Q ss_pred CChHHHHHHHHHHHHHcC--CCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEecc-CCCCccC
Q 001492 190 TGGQIKYVVELARALARM--PGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIP-FGPRDKY 266 (1067)
Q Consensus 190 ~GG~~~yv~~LA~aLa~~--G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~-~~~~~~~ 266 (1067)
.||.++.+++.+.+|.+. + |+|+|+|...+... .+.+.. ...+ .+....+++.++++. .+ .+
T Consensus 13 ggg~ervl~~a~~~l~~~~~~--~~v~i~t~~~~~~~--------~~~l~~-~~~~-f~~~~~~~~~~~~~~~~~---~~ 77 (419)
T cd03806 13 GGGGERVLWCAVRALQKRYPN--NIVVIYTGDLDATP--------EEILEK-VESR-FNIELDRPRIVFFLLKYR---KL 77 (419)
T ss_pred CCCchHHHHHHHHHHHHhCCC--cEEEEECCCCCCCH--------HHHHHH-HHHh-cCeecCCCceEEEEecce---ee
Confidence 559999999999999998 6 99999998653211 000000 0000 011223566666653 21 12
Q ss_pred cccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCC-chhHHHHHHHhcCCCcEEEEeCCCch----h
Q 001492 267 LRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYA-DAGDSAALLSGALNVPMVLTGHSLGR----N 341 (1067)
Q Consensus 267 l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~-~a~~~a~~l~~~~giP~V~t~H~l~~----~ 341 (1067)
++. ..|+++..+...+ . .+...+....+ .+||||..|.. ..++... ....++|+|+.+| ++ +
T Consensus 78 ~~~-~~~~r~~~~~~~~-~---~~~~~~~~~~~----~~pDv~i~~~g~~~~~~~~--~~~~~~~~i~y~h--~P~~~~d 144 (419)
T cd03806 78 VEA-STYPRFTLLGQAL-G---SMILGLEALLK----LVPDIFIDTMGYPFTYPLV--RLLGGCPVGAYVH--YPTISTD 144 (419)
T ss_pred ecc-ccCCceeeHHHHH-H---HHHHHHHHHHh----cCCCEEEEcCCcccHHHHH--HHhcCCeEEEEec--CCcchHH
Confidence 222 3444432221111 1 11111111111 36999988863 2222222 2223789999999 33 2
Q ss_pred hHHHHHhhCC--------CChh----hhhhHhH-HHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHH
Q 001492 342 KLEQLLKQGR--------QSKE----DINSTYK-IMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRA 408 (1067)
Q Consensus 342 ~~~~l~~~g~--------~~~~----~i~~~y~-~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~ 408 (1067)
.+.. +..+. +... .+...|+ ++.. .|+..++.||.|+++|+...+.+.+.+..
T Consensus 145 ~l~~-~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~--~~~~~~~~aD~ii~~S~~~~~~~~~~~~~----------- 210 (419)
T cd03806 145 MLQK-VRSREASYNNSATIARSPVLSKAKLLYYRLFAF--LYGLAGSFADVVMVNSTWTRNHIRSLWKR----------- 210 (419)
T ss_pred HHHH-HhhccccccCccchhccchHHHHHHHHHHHHHH--HHHHHhhcCCEEEECCHHHHHHHHHHhCc-----------
Confidence 2211 11121 1111 1111221 1112 57889999999999999877766444321
Q ss_pred HHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeC
Q 001492 409 RARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSR 488 (1067)
Q Consensus 409 ~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgR 488 (1067)
..++.|||||+|++.|.+... ....+.++|+++||
T Consensus 211 ------------~~~~~vi~~gvd~~~~~~~~~---------------------------------~~~~~~~~il~vgr 245 (419)
T cd03806 211 ------------NTKPSIVYPPCDVEELLKLPL---------------------------------DEKTRENQILSIAQ 245 (419)
T ss_pred ------------CCCcEEEcCCCCHHHhccccc---------------------------------ccccCCcEEEEEEe
Confidence 027899999999987754320 01245679999999
Q ss_pred CCCCCCHHHHHHHHHhcccccCC---CcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHH
Q 001492 489 PDPKKNITTLLKAFGECRPLREL---ANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPE 564 (1067)
Q Consensus 489 ld~~Kgi~~ll~A~~~l~~l~~~---~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ 564 (1067)
+.+.||+..+++||..+.+.... +++.| |+|++... ...++...++++++++++.++|.|+|.++.+++..
T Consensus 246 ~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~-----~~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~~l~~ 320 (419)
T cd03806 246 FRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNE-----DDEKRVEDLKLLAKELGLEDKVEFVVNAPFEELLE 320 (419)
T ss_pred ecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCc-----ccHHHHHHHHHHHHHhCCCCeEEEecCCCHHHHHH
Confidence 99999999999999998632221 34665 77876421 12346788889999999999999999999999999
Q ss_pred HHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc-hhhhc---cCCceEEeCCCCHHHHHHHHHHhhcCHH
Q 001492 565 IYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP-VDIHR---ALNNGLLVDPHDQQAIADALLKLVSEKN 640 (1067)
Q Consensus 565 ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~-~eiv~---~~~~Gllv~p~d~~~la~aL~~ll~d~~ 640 (1067)
+|+.| |++|+|+..|+||++++||||||+|||+++.||+ .|++. ++.+|++++ |++++|++|.+++++++
T Consensus 321 ~l~~a----dv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~ 394 (419)
T cd03806 321 ELSTA----SIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSE 394 (419)
T ss_pred HHHhC----eEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCH
Confidence 99999 9999999999999999999999999999999886 57887 789999984 99999999999999665
Q ss_pred H-HHHHHHHHHHHHHcCCHHHHH
Q 001492 641 L-WVECRKNGWKNIHLFSWPEHC 662 (1067)
Q Consensus 641 ~-~~~~~~~~~~~~~~fsw~~~a 662 (1067)
. ++.+++++++..++|||+...
T Consensus 395 ~~~~~~~~~~~~~~~~fs~~~f~ 417 (419)
T cd03806 395 EERLRIRRAARSSVKRFSDEEFE 417 (419)
T ss_pred HHHHHHHHHHHHHHHhhCHHHhc
Confidence 4 445555555544799998764
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-30 Score=300.95 Aligned_cols=345 Identities=20% Similarity=0.179 Sum_probs=245.8
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCc
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGI 245 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1067)
|||++++... ..||.++++..++++|.++| |+|++++...
T Consensus 1 MkIl~~~~~~-------------~~gG~~~~~~~l~~~l~~~G--~~v~v~~~~~------------------------- 40 (365)
T cd03825 1 MKVLHLNTSD-------------ISGGAARAAYRLHRALQAAG--VDSTMLVQEK------------------------- 40 (365)
T ss_pred CeEEEEecCC-------------CCCcHHHHHHHHHHHHHhcC--CceeEEEeec-------------------------
Confidence 8999997322 36899999999999999999 9999998721
Q ss_pred cccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHh
Q 001492 246 EVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSG 325 (1067)
Q Consensus 246 ~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~ 325 (1067)
. . +...+. ..+|||||+|+...+........
T Consensus 41 ------~----------~-------------------~~~~~~--------------~~~~diih~~~~~~~~~~~~~~~ 71 (365)
T cd03825 41 ------K----------A-------------------LISKIE--------------IINADIVHLHWIHGGFLSIEDLS 71 (365)
T ss_pred ------c----------h-------------------hhhChh--------------cccCCEEEEEccccCccCHHHHH
Confidence 0 0 000000 14699999998644333333333
Q ss_pred c--CCCcEEEEeCCCchhhHHHHHhh--------CC----C-ChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHH
Q 001492 326 A--LNVPMVLTGHSLGRNKLEQLLKQ--------GR----Q-SKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDE 390 (1067)
Q Consensus 326 ~--~giP~V~t~H~l~~~~~~~l~~~--------g~----~-~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~ 390 (1067)
. .++|+|+|+|+.+.......... +. . ..........+.++. .......++.++++|+...+.
T Consensus 72 ~~~~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~s~~~~~~ 149 (365)
T cd03825 72 KLLDRKPVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRK--RKAWADLNLTIVAPSRWLADC 149 (365)
T ss_pred HHHcCCCEEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHH--HHHhccCCcEEEehhHHHHHH
Confidence 3 39999999998754321100000 00 0 000000011111111 112235677888888866655
Q ss_pred HHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHh
Q 001492 391 QWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSD 470 (1067)
Q Consensus 391 ~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (1067)
+...+. .+..++.++|||+|.+.|.+... ...
T Consensus 150 ~~~~~~----------------------~~~~~~~vi~ngi~~~~~~~~~~--------------------------~~~ 181 (365)
T cd03825 150 ARSSSL----------------------FKGIPIEVIPNGIDTTIFRPRDK--------------------------REA 181 (365)
T ss_pred HHhccc----------------------cCCCceEEeCCCCcccccCCCcH--------------------------HHH
Confidence 433321 11238999999999988765431 011
Q ss_pred hhhhccCCCCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCC
Q 001492 471 VMRFLTNPHKPMILALSRPDP--KKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDL 547 (1067)
Q Consensus 471 ~~~~~~~~~~~~Il~vgRld~--~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l 547 (1067)
...+..+++++++++.++... .||++.+++|+..+... ..+++.+ ++|+++.... .++
T Consensus 182 ~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~-~~~~~~~~i~G~~~~~~~------------------~~~ 242 (365)
T cd03825 182 RKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAER-WKDDIELVVFGASDPEIP------------------PDL 242 (365)
T ss_pred HHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhc-cCCCeEEEEeCCCchhhh------------------ccC
Confidence 223334556677777777654 89999999999988531 2467776 7777653111 144
Q ss_pred CCcEEeCCCCC-CCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHH
Q 001492 548 YGQVAYPKHHK-QYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQ 626 (1067)
Q Consensus 548 ~~~V~~~g~~~-~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~ 626 (1067)
..+|.|+|+++ .+++..+|+.| |++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|++
T Consensus 243 ~~~v~~~g~~~~~~~~~~~~~~a----d~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~ 318 (365)
T cd03825 243 PFPVHYLGSLNDDESLALIYSAA----DVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPE 318 (365)
T ss_pred CCceEecCCcCCHHHHHHHHHhC----CEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHH
Confidence 56899999998 67899999999 99999999999999999999999999999999999999998899999999999
Q ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHh
Q 001492 627 AIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 627 ~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~ 672 (1067)
+++++|.+++++++.+.++++++++.+ +.|||+.++++|+++|+++
T Consensus 319 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 319 DLAEGIEWLLADPDEREELGEAARELAENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 999999999999999999999999998 5899999999999999763
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.2e-31 Score=307.03 Aligned_cols=284 Identities=17% Similarity=0.161 Sum_probs=208.3
Q ss_pred CCceEEEEcCCchhHHHHHHH-hcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHH--HhHHHhhcccccCCEE
Q 001492 304 VWPYVIHGHYADAGDSAALLS-GALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIM--RRIEGEELSLDAAELV 380 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~-~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~--~ri~~E~~~l~~Ad~V 380 (1067)
.++|+||++....+. .+. ...++|+|++.|++....+.++........ ...|++. .....|+.+++.+|.|
T Consensus 103 ~~~D~v~~~~~~~~~---~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~e~~~~~~ad~v 176 (397)
T TIGR03087 103 EPVDAIVVFSSAMAQ---YVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWPL---RWIYRREGRLLLAYERAIAARFDAA 176 (397)
T ss_pred CCCCEEEEeccccce---eccccccCCCeEeehhhHHHHHHHHHHhccCcch---hHHHHHHHHHHHHHHHHHHhhCCeE
Confidence 469999999753322 222 345899999999986655444432222111 1222221 1113588899999999
Q ss_pred EeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCC
Q 001492 381 ITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSS 460 (1067)
Q Consensus 381 i~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1067)
+++|+.+.+.+.+.+.. ...++.+||||+|.+.|.+....
T Consensus 177 i~~S~~~~~~l~~~~~~----------------------~~~~v~vipngvd~~~f~~~~~~------------------ 216 (397)
T TIGR03087 177 TFVSRAEAELFRRLAPE----------------------AAGRITAFPNGVDADFFSPDRDY------------------ 216 (397)
T ss_pred EEcCHHHHHHHHHhCCC----------------------CCCCeEEeecccchhhcCCCccc------------------
Confidence 99999888776543321 11389999999999988654310
Q ss_pred CCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHH----HHHhcccccCCCcEEE-EEecCCChhhhhccchHHH
Q 001492 461 PKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLK----AFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVL 535 (1067)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~----A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~ 535 (1067)
.. . ..+++++|+|+||+++.||++.++. ++..+. ...|++.+ |+|+++..
T Consensus 217 --~~--------~--~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~--~~~p~~~l~ivG~g~~~----------- 271 (397)
T TIGR03087 217 --PN--------P--YPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVR--ARRPAAEFYIVGAKPSP----------- 271 (397)
T ss_pred --cC--------C--CCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHH--HHCCCcEEEEECCCChH-----------
Confidence 00 0 1245679999999999999999884 455553 34567776 88887631
Q ss_pred HHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC-CCCCCHHHHHHHHcCCCEEEcCCCCchhhhccC
Q 001492 536 ITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPAL-VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRAL 614 (1067)
Q Consensus 536 ~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~-~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~ 614 (1067)
. +.++...++|.|.|+++ ++..+|+.| |++|+||. .||||++++||||||+|||+|+.|+. .+....
T Consensus 272 -~----~~~l~~~~~V~~~G~v~--~~~~~~~~a----dv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~ 339 (397)
T TIGR03087 272 -A----VRALAALPGVTVTGSVA--DVRPYLAHA----AVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALP 339 (397)
T ss_pred -H----HHHhccCCCeEEeeecC--CHHHHHHhC----CEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccC
Confidence 1 22333456799999975 799999999 99999997 59999999999999999999997643 333345
Q ss_pred CceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHH
Q 001492 615 NNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYLTRVAA 671 (1067)
Q Consensus 615 ~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~ 671 (1067)
.+|+++. .|+++++++|.++++|+++++++++++++.+ ++|||+.+++++.++|..
T Consensus 340 ~~g~lv~-~~~~~la~ai~~ll~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~~ 396 (397)
T TIGR03087 340 GAELLVA-ADPADFAAAILALLANPAEREELGQAARRRVLQHYHWPRNLARLDALLEQ 396 (397)
T ss_pred CcceEeC-CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcC
Confidence 6799996 8999999999999999999999999999998 599999999999998853
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-29 Score=287.82 Aligned_cols=347 Identities=24% Similarity=0.295 Sum_probs=255.4
Q ss_pred CChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCccc
Q 001492 190 TGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRK 269 (1067)
Q Consensus 190 ~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k 269 (1067)
.||...++..|+++|.+.| |+|++++....... .....++.++.++.... ..
T Consensus 9 ~~g~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~--~~-- 60 (359)
T cd03808 9 DGGLYSFRLPLIKALRAAG--YEVHVVAPPGDELE----------------------ELEALGVKVIPIPLDRR--GI-- 60 (359)
T ss_pred chhHHHHHHHHHHHHHhcC--CeeEEEecCCCccc----------------------ccccCCceEEecccccc--cc--
Confidence 5799999999999999999 99999998532211 01124677777765331 00
Q ss_pred ccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHh-cCCCcEEEEeCCCchhhHHHHHh
Q 001492 270 ELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSG-ALNVPMVLTGHSLGRNKLEQLLK 348 (1067)
Q Consensus 270 ~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~-~~giP~V~t~H~l~~~~~~~l~~ 348 (1067)
..+..+ ..+..+.+.+.+ .+||+||+|.......+.+.++ ..+.+++++.|+.+.......
T Consensus 61 -~~~~~~--------~~~~~~~~~~~~-------~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-- 122 (359)
T cd03808 61 -NPFKDL--------KALLRLYRLLRK-------ERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSGG-- 122 (359)
T ss_pred -ChHhHH--------HHHHHHHHHHHh-------cCCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccch--
Confidence 011111 111122222222 5799999998766666666665 456778888888754321100
Q ss_pred hCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeC
Q 001492 349 QGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIP 428 (1067)
Q Consensus 349 ~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIP 428 (1067)
. ...+... .++..+..+|.+++.|+...+.+...+... ...++.++|
T Consensus 123 -------~---~~~~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~---------------------~~~~~~~~~ 169 (359)
T cd03808 123 -------L---KRRLYLL--LERLALRFTDKVIFQNEDDRDLALKLGIIK---------------------KKKTVLIPG 169 (359)
T ss_pred -------h---HHHHHHH--HHHHHHhhccEEEEcCHHHHHHHHHhcCCC---------------------cCceEEecC
Confidence 0 1112222 256678899999999998877664433210 012778889
Q ss_pred CCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc
Q 001492 429 PGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPL 508 (1067)
Q Consensus 429 nGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l 508 (1067)
+|+|...+.+.... ..++.+.|+++||+.+.||++.+++++..+.
T Consensus 170 ~~~~~~~~~~~~~~---------------------------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~-- 214 (359)
T cd03808 170 SGVDLDRFSPSPEP---------------------------------IPEDDPVFLFVARLLKDKGIDELLEAARILK-- 214 (359)
T ss_pred CCCChhhcCccccc---------------------------------cCCCCcEEEEEeccccccCHHHHHHHHHHHH--
Confidence 99999877543310 1246789999999999999999999999985
Q ss_pred cCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCH
Q 001492 509 RELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGL 587 (1067)
Q Consensus 509 ~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~Egfgl 587 (1067)
...+++.+ |+|.++...... .. ++..++..++|.|.|+ .+++..+|+.| |++++|+..|+||+
T Consensus 215 ~~~~~~~l~i~G~~~~~~~~~--------~~--~~~~~~~~~~v~~~g~--~~~~~~~~~~a----di~i~ps~~e~~~~ 278 (359)
T cd03808 215 AKGPNVRLLLVGDGDEENPAA--------IL--EIEKLGLEGRVEFLGF--RDDVPELLAAA----DVFVLPSYREGLPR 278 (359)
T ss_pred hcCCCeEEEEEcCCCcchhhH--------HH--HHHhcCCcceEEEeec--cccHHHHHHhc----cEEEecCcccCcch
Confidence 34567776 778776432211 10 3566777889999998 68999999999 99999999999999
Q ss_pred HHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHH
Q 001492 588 TLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYL 666 (1067)
Q Consensus 588 tllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l 666 (1067)
+++|||+||+|||+|+.|+..+++.++.+|++++++|+++++++|.+++.+++.+.++++++++.+ ++|||+.++++|+
T Consensus 279 ~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 279 VLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDPELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 999999999999999999999999989999999999999999999999999999999999999997 6999999999886
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=289.35 Aligned_cols=355 Identities=22% Similarity=0.266 Sum_probs=245.1
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
||++|+.+.. ...+||.++++..|+++|+++| |+|++++......... +.
T Consensus 1 kIl~i~~~~~----------~~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~--~~---------------- 50 (359)
T cd03823 1 RILVVNHLYP----------PRSVGGAEVVAHDLAEALAKRG--HEVAVLTAGEDPPRQD--KE---------------- 50 (359)
T ss_pred CeeEEcccCC----------cccccchHHHHHHHHHHHHhcC--CceEEEeCCCCCCCcc--cc----------------
Confidence 5888885443 1347999999999999999999 9999998754221110 00
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc-hhHHHHHHHh
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD-AGDSAALLSG 325 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~-a~~~a~~l~~ 325 (1067)
..+..+...+.............+.....+.......+ .+.+.+ .+||+||+|... .+......++
T Consensus 51 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------~~~dii~~~~~~~~~~~~~~~~~ 117 (359)
T cd03823 51 ---VIGVVVYGRPIDEVLRSALPRDLFHLSDYDNPAVVAEF---ARLLED-------FRPDVVHFHHLQGLGVSILRAAR 117 (359)
T ss_pred ---cccceeeccccccccCCCchhhhhHHHhccCHHHHHHH---HHHHHH-------cCCCEEEECCccchHHHHHHHHH
Confidence 01111211110000000000000000000000111111 111111 569999999863 3333444566
Q ss_pred cCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHH
Q 001492 326 ALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKV 405 (1067)
Q Consensus 326 ~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~ 405 (1067)
..++|+|++.|+.+...... .+ .....|.++++|+...+.+...+.
T Consensus 118 ~~~~~~i~~~hd~~~~~~~~----------------~~---------~~~~~d~ii~~s~~~~~~~~~~~~--------- 163 (359)
T cd03823 118 DRGIPIVLTLHDYWLICPRQ----------------GL---------FKKGGDAVIAPSRFLLDRYVANGL--------- 163 (359)
T ss_pred hcCCCEEEEEeeeeeecchh----------------hh---------hccCCCEEEEeCHHHHHHHHHcCC---------
Confidence 77899999999864322100 00 112239999999987766543321
Q ss_pred HHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEE
Q 001492 406 LRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILA 485 (1067)
Q Consensus 406 l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~ 485 (1067)
...++.+||||+|...+.+... ....+++.|++
T Consensus 164 --------------~~~~~~vi~n~~~~~~~~~~~~---------------------------------~~~~~~~~i~~ 196 (359)
T cd03823 164 --------------FAEKISVIRNGIDLDRAKRPRR---------------------------------APPGGRLRFGF 196 (359)
T ss_pred --------------CccceEEecCCcChhhcccccc---------------------------------CCCCCceEEEE
Confidence 1138999999999987754320 01345678999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHH
Q 001492 486 LSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPE 564 (1067)
Q Consensus 486 vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ 564 (1067)
+||+.+.||++.+++++..+.. +++.+ ++|.++..... .... +...+|.|.|+++.+++..
T Consensus 197 ~G~~~~~k~~~~li~~~~~l~~----~~~~l~i~G~~~~~~~~-----------~~~~---~~~~~v~~~g~~~~~~~~~ 258 (359)
T cd03823 197 IGQLTPHKGVDLLLEAFKRLPR----GDIELVIVGNGLELEEE-----------SYEL---EGDPRVEFLGAYPQEEIDD 258 (359)
T ss_pred EecCccccCHHHHHHHHHHHHh----cCcEEEEEcCchhhhHH-----------HHhh---cCCCeEEEeCCCCHHHHHH
Confidence 9999999999999999999853 46665 77887643221 0111 5567899999999999999
Q ss_pred HHHHhhcCCcEEEecCC-CCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHH
Q 001492 565 IYRLAAKTKGVFINPAL-VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWV 643 (1067)
Q Consensus 565 ly~~A~~~~dV~v~ps~-~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~ 643 (1067)
+|+.| |++++||. .|+||++++||||||+|||+|+.|+..|++.++.+|+++++.|.++++++|.+++++++.++
T Consensus 259 ~~~~a----d~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~ 334 (359)
T cd03823 259 FYAEI----DVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDPDLLE 334 (359)
T ss_pred HHHhC----CEEEEcCcccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhChHHHH
Confidence 99999 99999997 79999999999999999999999999999999889999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 001492 644 ECRKNGWKNIHLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 644 ~~~~~~~~~~~~fsw~~~a~~~l~~~~ 670 (1067)
.+++++++.... +.++++|+++|+
T Consensus 335 ~~~~~~~~~~~~---~~~~~~~~~~~~ 358 (359)
T cd03823 335 RLRAGIEPPRSI---EDQAEEYLKLYR 358 (359)
T ss_pred HHHHhHHHhhhH---HHHHHHHHHHhh
Confidence 999998877543 888888888875
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=286.33 Aligned_cols=243 Identities=19% Similarity=0.275 Sum_probs=190.2
Q ss_pred EEEEeCCCCCCC---CchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEE
Q 001492 779 VIALDCYDSKGA---PDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMY 855 (1067)
Q Consensus 779 lia~DiDGTLl~---~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~ 855 (1067)
+|++|+||||++ .++.+++.+++++++++++| + .||+||||++.++..++.++++. .|+++||+||+.|+
T Consensus 3 li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~g----i-~fv~aTGR~~~~~~~~~~~~~~~--~p~~~I~~NGa~I~ 75 (249)
T TIGR01485 3 LLVSDLDNTLVDHTDGDNQALLRLNALLEDHRGED----S-LLVYSTGRSPHSYKELQKQKPLL--TPDIWVTSVGSEIY 75 (249)
T ss_pred EEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhccC----c-eEEEEcCCCHHHHHHHHhcCCCC--CCCEEEEcCCceEE
Confidence 788899999886 67889999999999999997 7 89999999999999999988874 48899999999999
Q ss_pred ecCCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCCchHHH
Q 001492 856 YPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRI 935 (1067)
Q Consensus 856 ~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~ 935 (1067)
+++ ....+..|...+...|..+.+......++... .........+|++|..........+
T Consensus 76 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------------~~~~~~~~~~k~~~~~~~~~~~~~~ 135 (249)
T TIGR01485 76 YGG-------AEVPDQHWAEYLSEKWQRDIVVAITDKFEELK-------------PQPDLEQRPHKVSFFLDPEAAPEVI 135 (249)
T ss_pred eCC-------CCcCCHHHHHHHhcccCHHHHHHHHhcCcccc-------------cCCccccCCeeEEEEechhhhhHHH
Confidence 853 23467889888888887544333222111111 0111124578888876433222235
Q ss_pred HHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcC-CceEEEeCC
Q 001492 936 DDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISG-AHKTLIMKG 1014 (1067)
Q Consensus 936 ~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~-ag~gVaMgN 1014 (1067)
+++.+.+...+..+.++.+++. ++||+|+++|||.||++|++++|++++++++ |||+.| | ++||+. ++.+|||+|
T Consensus 136 ~~l~~~l~~~~~~~~~~~~~~~-~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~-~GD~~N-D-~~ml~~~~~~~va~~n 211 (249)
T TIGR01485 136 KQLTEMLKETGLDVKLIYSSGK-DLDILPQGSGKGQALQYLLQKLAMEPSQTLV-CGDSGN-D-IELFEIGSVRGVIVSN 211 (249)
T ss_pred HHHHHHHHhcCCCEEEEEECCc-eEEEEeCCCChHHHHHHHHHHcCCCccCEEE-EECChh-H-HHHHHccCCcEEEECC
Confidence 6677777766777888888875 9999999999999999999999999999999 999999 9 999998 779999999
Q ss_pred CcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhhccc
Q 001492 1015 VVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVGKA 1063 (1067)
Q Consensus 1015 A~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g~~ 1063 (1067)
|. +++|.+++ +.+.+. .|+|+.+.++||+++|+|||+.
T Consensus 212 a~---~~~k~~~~-------~~~~~~-~~~~~~~~~~Gi~e~l~~~~~~ 249 (249)
T TIGR01485 212 AQ---EELLQWYD-------ENAKDK-IYHASERCAGGIIEAIAHFDLL 249 (249)
T ss_pred CH---HHHHHHHH-------hcccCc-EEEecCCCcHHHHHHHHHcCCC
Confidence 99 55665543 122333 3588999999999999999974
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-29 Score=287.66 Aligned_cols=283 Identities=31% Similarity=0.440 Sum_probs=226.8
Q ss_pred CCceEEEEcCC-chhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEe
Q 001492 304 VWPYVIHGHYA-DAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVIT 382 (1067)
Q Consensus 304 ~~pDvIh~h~~-~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~ 382 (1067)
.+||+||+|+. .....+..+++..++|++++.|+......... .+.+. .++..+..+|.+++
T Consensus 92 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~---------------~~~~~--~~~~~~~~~d~ii~ 154 (377)
T cd03798 92 FRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRK---------------RLLRA--LLRRALRRADAVIA 154 (377)
T ss_pred CCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCch---------------hhHHH--HHHHHHhcCCeEEe
Confidence 57999999976 35666777788889999999998754332100 01111 24566899999999
Q ss_pred CCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCC
Q 001492 383 STKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPK 462 (1067)
Q Consensus 383 ~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1067)
.|+...+.+...+ + +..++.++|||+|...+.+.....
T Consensus 155 ~s~~~~~~~~~~~--~---------------------~~~~~~~i~~~~~~~~~~~~~~~~------------------- 192 (377)
T cd03798 155 VSEALADELKALG--I---------------------DPEKVTVIPNGVDTERFSPADRAE------------------- 192 (377)
T ss_pred CCHHHHHHHHHhc--C---------------------CCCceEEcCCCcCcccCCCcchHH-------------------
Confidence 9998887765442 1 123899999999998876543100
Q ss_pred CcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHH
Q 001492 463 AIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKL 541 (1067)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l 541 (1067)
. .+.....+++.|+++|++.+.||++.+++++..+.. ..+++.+ ++|+++.. ..+...
T Consensus 193 ------~--~~~~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~--~~~~~~l~i~g~~~~~-----------~~~~~~ 251 (377)
T cd03798 193 ------A--RKLGLPEDKKVILFVGRLVPRKGIDYLIEALARLLK--KRPDVHLVIVGDGPLR-----------EALEAL 251 (377)
T ss_pred ------H--HhccCCCCceEEEEeccCccccCHHHHHHHHHHHHh--cCCCeEEEEEcCCcch-----------HHHHHH
Confidence 0 111223567889999999999999999999999853 3567776 77776542 345566
Q ss_pred HHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeC
Q 001492 542 IDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVD 621 (1067)
Q Consensus 542 ~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~ 621 (1067)
++.+++.++|.+.|+++.+++..+|+.| |++++|+..|+||++++|||+||+|||+++.|+..+++.++.+|++++
T Consensus 252 ~~~~~~~~~v~~~g~~~~~~~~~~~~~a----d~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~ 327 (377)
T cd03798 252 AAELGLEDRVTFLGAVPHEEVPAYYAAA----DVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVP 327 (377)
T ss_pred HHhcCCcceEEEeCCCCHHHHHHHHHhc----CeeecchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEEC
Confidence 7788888999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHh
Q 001492 622 PHDQQAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 622 p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~ 672 (1067)
++|+++++++|.+++++++. ++..++++.+ +.|+|+.++++|.++|+++
T Consensus 328 ~~~~~~l~~~i~~~~~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 328 PGDPEALAEAILRLLADPWL--RLGRAARRRVAERFSWENVAERLLELYREV 377 (377)
T ss_pred CCCHHHHHHHHHHHhcCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHhhC
Confidence 99999999999999999887 6777777777 6999999999999998753
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-32 Score=305.89 Aligned_cols=248 Identities=33% Similarity=0.511 Sum_probs=178.4
Q ss_pred CCceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCC-------C---eeEEEEEecCCCCCCCCCcCCCc
Q 001492 163 EKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMP-------G---VYRVDLFSRQVSSPEVDWSYGEP 232 (1067)
Q Consensus 163 ~~~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G-------~---v~~V~v~t~~~~~~~~~~~y~~~ 232 (1067)
+|-.+|++||+||+++++|| +|| ||||||.+||+++|++|.+.+ | .-+|.++||.+.+.. ...+.++
T Consensus 270 Pmvf~vvliSpHG~f~q~nv-LG~-pDTGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd~~-~t~~~q~ 346 (550)
T PF00862_consen 270 PMVFNVVLISPHGYFGQENV-LGR-PDTGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPDAK-GTTCNQR 346 (550)
T ss_dssp ---SEEEEE--SS--STTST-TSS-TTSSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TBTT-CGGGTSS
T ss_pred ceeEEEEEEcCccccccccc-cCC-CCCCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccCCc-CCCcccc
Confidence 45579999999999999999 999 999999999999999998742 1 136999999885533 2344444
Q ss_pred ccccCCCCCCCCccccccCCeEEEeccCCCC----ccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceE
Q 001492 233 AEMLTGGPEDDGIEVGESSGAYIIRIPFGPR----DKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYV 308 (1067)
Q Consensus 233 ~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~----~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDv 308 (1067)
.|. +...++++|+|+||++. ++|+.|+.+|||+.+|++.+..++.+ ++ ..+||+
T Consensus 347 le~-----------~~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~-------e~----~~~Pdl 404 (550)
T PF00862_consen 347 LEK-----------VSGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILA-------EL----QGKPDL 404 (550)
T ss_dssp EEE-----------ETTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHH-------HH----TS--SE
T ss_pred ccc-----------cCCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHH-------Hh----CCCCcE
Confidence 433 44567999999999985 37999999999999999988777654 11 247999
Q ss_pred EEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHH
Q 001492 309 IHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEI 388 (1067)
Q Consensus 309 Ih~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~ 388 (1067)
||+||++++.+|+++++++|+|+++|.|+++..|+. .+.+++++++..|+|+++|.+|..++++||.|||||.|++
T Consensus 405 I~GnYsDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~----~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI 480 (550)
T PF00862_consen 405 IIGNYSDGNLVASLLSRKLGVTQCFIAHSLEKTKYE----DSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEI 480 (550)
T ss_dssp EEEEHHHHHHHHHHHHHHHT-EEEEE-SS-HHHHHH----TTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHH
T ss_pred EEeccCcchHHHHHHHhhcCCceehhhhcccccccc----ccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhh
Confidence 999999999999999999999999999999999865 4778999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCC
Q 001492 389 DEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQE 440 (1067)
Q Consensus 389 ~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~ 440 (1067)
+.++..++.|.+..+..+.. .-+.|++.++|+||+.++|||+|.+.|.|..
T Consensus 481 ~g~~~~~gqyes~~~ftlpg-Lyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt 531 (550)
T PF00862_consen 481 AGQKDTVGQYESHKAFTLPG-LYRVVNGIDVFDPKFNIVSPGADESIYFPYT 531 (550)
T ss_dssp HB-SSSBHTTGGGSSEEETT-TEEEEES--TT-TTEEE------TTTS--TT
T ss_pred cCCccccCCccchhhcchHh-HHhhhccccccCCcccccCCCCCcceecCCc
Confidence 99888777776432222212 5678889999999999999999999998876
|
4.1.13 from EC in the following reaction: |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=302.07 Aligned_cols=246 Identities=19% Similarity=0.282 Sum_probs=188.7
Q ss_pred EEEEEeCCCCCCCC--chhhHHHHHHHH-HHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceE
Q 001492 778 IVIALDCYDSKGAP--DKKMIQIMYDVF-KAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEM 854 (1067)
Q Consensus 778 llia~DiDGTLl~~--~~~i~~~~~~al-~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I 854 (1067)
++|++|+||||+++ ++.++....+++ +++.++| + .|++||||++..+.++++++++. .||++||+||++|
T Consensus 10 ~lI~sDLDGTLL~~~~~~~~s~~~~~~l~~~~~~~g----i-~fv~aTGR~~~~~~~l~~~~~l~--~p~~~I~~nGt~I 82 (413)
T PLN02382 10 LMIVSDLDHTMVDHHDPENLSLLRFNALWEAEYRHD----S-LLVFSTGRSPTLYKELRKEKPLL--TPDITIMSVGTEI 82 (413)
T ss_pred EEEEEcCCCcCcCCCCccchhHHHHHHHHHHhhcCC----e-eEEEEcCCCHHHHHHHHHhCCCC--CCCEEEEcCCcEE
Confidence 36778999998876 446775555554 8888886 7 89999999999999999998774 4889999999999
Q ss_pred EecCCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCCchHH
Q 001492 855 YYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARR 934 (1067)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~ 934 (1067)
++.. ....+..|...+...|....+...+..++.... +....+..+|++|++.+......
T Consensus 83 ~~~~-------~~~~d~~w~~~l~~~w~~~~v~~~~~~~~~l~~-------------q~~~~~~~~Ki~~~~~~~~~~~~ 142 (413)
T PLN02382 83 AYGE-------SMVPDHGWVEYLNKKWDREIVVEETSKFPELKL-------------QPETEQRPHKVSFYVDKKKAQEV 142 (413)
T ss_pred EeCC-------CCccChhHHHHHhccCChhhHHHHHhcCCCccc-------------CCcccCCCeEEEEEechHHhHHH
Confidence 9864 455788999999999986544443333322111 12223567899888754333334
Q ss_pred HHHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHh---CCCcccEEEEecCCCCCChhhhhcCCc-eEE
Q 001492 935 IDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRW---RLNVANMFVILGESGDTDYEELISGAH-KTL 1010 (1067)
Q Consensus 935 ~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~---gi~~e~vva~fGDs~N~D~~eML~~ag-~gV 1010 (1067)
.+.+.+.+...+..+.++++++. ++||+|+++|||+||++|+++| |+++++++| |||++| | ++||+.++ +||
T Consensus 143 ~~~l~~~~~~~g~~~~i~~s~~~-~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~ia-fGDs~N-D-leMl~~ag~~gv 218 (413)
T PLN02382 143 IKELSERLEKRGLDVKIIYSGGI-DLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLV-CGDSGN-D-AELFSVPDVYGV 218 (413)
T ss_pred HHHHHHHHHhcCCcEEEEEECCc-EEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEE-EeCCHH-H-HHHHhcCCCCEE
Confidence 45666666666777888888885 9999999999999999999999 999999999 999999 9 99999999 899
Q ss_pred EeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhhccc
Q 001492 1011 IMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVGKA 1063 (1067)
Q Consensus 1011 aMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g~~ 1063 (1067)
||+||. +++|..++ ++ ....+.+. .+.+..++||++||+||+++
T Consensus 219 am~NA~---~elk~~a~----~~-~~~~~~~~-~a~~~~~~GI~~al~~f~l~ 262 (413)
T PLN02382 219 MVSNAQ---EELLQWYA----EN-AKDNPKII-HATERCAAGIIQAIGHFNLG 262 (413)
T ss_pred EEcCCc---HHHHHHHH----hh-ccCCCcEE-EcCCCCccHHHHHHHHhCCC
Confidence 999999 66665432 11 12233444 45677899999999999986
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-30 Score=286.50 Aligned_cols=245 Identities=16% Similarity=0.136 Sum_probs=163.8
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||+++++.+++.++++|++++++| + .|+|||||++.++.++++.++++ +++||+||+.|+...
T Consensus 4 li~~DlDGTLl~~~~~is~~~~~ai~~l~~~G----~-~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~~~~ 74 (266)
T PRK10976 4 VVASDLDGTLLSPDHTLSPYAKETLKLLTARG----I-HFVFATGRHHVDVGQIRDNLEIK----SYMITSNGARVHDTD 74 (266)
T ss_pred EEEEeCCCCCcCCCCcCCHHHHHHHHHHHHCC----C-EEEEEcCCChHHHHHHHHhcCCC----CeEEEcCCcEEECCC
Confidence 56669999999988899999999999999997 7 89999999999999999998773 479999999998643
Q ss_pred CCcccCCcCCCChhhhhc----------cc------cccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEE
Q 001492 859 TYTEEGGKLFPDPDYASH----------ID------YRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCI 922 (1067)
Q Consensus 859 ~~~~~~~~~~~d~~~~~~----------i~------~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki 922 (1067)
+..... ...+...... +. ..|.................... ..............++
T Consensus 75 ~~~i~~--~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~ki 147 (266)
T PRK10976 75 GNLIFS--HNLDRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKY-----QLYEPGLLEPDGVSKV 147 (266)
T ss_pred CCEehh--hcCCHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcc-----eeechhhcccCCceEE
Confidence 221100 0011100000 00 00000000000000000000000 0000000011234455
Q ss_pred EEEecCCCchHHHHHHHHHHHhc-CCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhh
Q 001492 923 SYLIKDPSKARRIDDLRQKLRMR-GLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEE 1001 (1067)
Q Consensus 923 ~~~~~~~~~~~~~~el~~~L~~~-~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~e 1001 (1067)
.+...+. ..+.++.+.+... +..+.++.+.+. ++||+|.++|||.||++|++++||++++++| |||+.| | ++
T Consensus 148 ~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~s~~~-~~eI~~~gvsKg~al~~l~~~lgi~~~~via-fGD~~N-D-i~ 220 (266)
T PRK10976 148 FFTCDSH---EKLLPLEQAINARWGDRVNVSFSTLT-CLEVMAGGVSKGHALEAVAKKLGYSLKDCIA-FGDGMN-D-AE 220 (266)
T ss_pred EEEcCCH---HHHHHHHHHHHHHhCCcEEEEEeCCc-eEEEEcCCCChHHHHHHHHHHcCCCHHHeEE-EcCCcc-c-HH
Confidence 4443222 2334555555432 345677777765 9999999999999999999999999999999 999999 9 99
Q ss_pred hhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhhcc
Q 001492 1002 LISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVGK 1062 (1067)
Q Consensus 1002 ML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g~ 1062 (1067)
||+.+|+||||+||. +++|..|+ ..+||.++++|||+++|++|.+
T Consensus 221 Ml~~ag~~vAm~NA~---~~vK~~A~-------------~~~v~~~n~edGVa~~l~~~~~ 265 (266)
T PRK10976 221 MLSMAGKGCIMGNAH---QRLKDLLP-------------ELEVIGSNADDAVPHYLRKLYL 265 (266)
T ss_pred HHHHcCCCeeecCCc---HHHHHhCC-------------CCeecccCchHHHHHHHHHHhh
Confidence 999999999999999 66777753 2268889999999999999854
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-30 Score=282.82 Aligned_cols=239 Identities=18% Similarity=0.160 Sum_probs=162.0
Q ss_pred EEEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEec
Q 001492 778 IVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYP 857 (1067)
Q Consensus 778 llia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~ 857 (1067)
-+|++|+||||+++++.+++.++++|++++++| + .|+|||||++..+.+++++++++ .++||+||+.|++.
T Consensus 4 kli~~DlDGTLl~~~~~i~~~~~~al~~~~~~g----~-~v~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~~~ 74 (264)
T COG0561 4 KLLAFDLDGTLLDSNKTISPETKEALARLREKG----V-KVVLATGRPLPDVLSILEELGLD----GPLITFNGALIYNG 74 (264)
T ss_pred eEEEEcCCCCccCCCCccCHHHHHHHHHHHHCC----C-EEEEECCCChHHHHHHHHHcCCC----ccEEEeCCeEEecC
Confidence 366679999999998899999999999999997 7 89999999999999999998884 37999999999987
Q ss_pred CCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhc---ccCCC---------------CCCC-CCCCcccccccCC
Q 001492 858 GTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNT---TEGGE---------------NSKN-SSSPIQEDQKSSN 918 (1067)
Q Consensus 858 ~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~---~~~~~---------------~~~~-~~~~~~~~~~~~~ 918 (1067)
+.... ....+......+ .......... ..... .... .......... ..
T Consensus 75 ~~~i~---~~~l~~~~~~~i---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 141 (264)
T COG0561 75 GELLF---QKPLSREDVEEL---------LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAE-LE 141 (264)
T ss_pred CcEEe---eecCCHHHHHHH---------HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhh-cC
Confidence 31111 011111111111 0111110000 00000 0000 0000000000 00
Q ss_pred ceEEEEEecCCCchHHHHHHHHHHHhcCC--cEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCC
Q 001492 919 AHCISYLIKDPSKARRIDDLRQKLRMRGL--RCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGD 996 (1067)
Q Consensus 919 ~~ki~~~~~~~~~~~~~~el~~~L~~~~~--~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N 996 (1067)
..++...... .....++.+.+..... ...+..+.+. ++||+|+++|||.||++|+++||++++++|| |||+.|
T Consensus 142 ~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~s~~~-~lei~~~g~~K~~al~~l~~~lgi~~~~v~a-fGD~~N 216 (264)
T COG0561 142 DNKIIALDKD---HEILEELVEALRKRFPDLGLTVSSSGPI-SLDITPKGVSKGYALQRLAKLLGIKLEEVIA-FGDSTN 216 (264)
T ss_pred cceEEEEecC---hHhHHHHHHHHhhhccccceEEEEcCCc-eEEEecCCCchHHHHHHHHHHhCCCHHHeEE-eCCccc
Confidence 1111111111 1234455555554322 2334444443 5999999999999999999999999999999 999999
Q ss_pred CChhhhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhhccc
Q 001492 997 TDYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVGKA 1063 (1067)
Q Consensus 997 ~D~~eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g~~ 1063 (1067)
| ++||+.+|+||||+||. +++|..|+ ++|.+++++||+++|+++.+.
T Consensus 217 -D-~~Ml~~ag~gvam~Na~---~~~k~~A~---------------~vt~~n~~~Gv~~~l~~~~~~ 263 (264)
T COG0561 217 -D-IEMLEVAGLGVAMGNAD---EELKELAD---------------YVTTSNDEDGVAEALEKLLLL 263 (264)
T ss_pred -c-HHHHHhcCeeeeccCCC---HHHHhhCC---------------cccCCccchHHHHHHHHHhcc
Confidence 9 99999999999999998 77888887 999999999999999998764
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-30 Score=285.36 Aligned_cols=248 Identities=13% Similarity=0.128 Sum_probs=164.7
Q ss_pred EEEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEec
Q 001492 778 IVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYP 857 (1067)
Q Consensus 778 llia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~ 857 (1067)
-+|++|+||||+++++.+++.++++|++++++| + .|+|||||++.++.+++++++++. ..+++||+||+.|++.
T Consensus 4 kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G----~-~~~iaTGR~~~~~~~~~~~l~~~~-~~~~~I~~NGa~i~~~ 77 (270)
T PRK10513 4 KLIAIDMDGTLLLPDHTISPAVKQAIAAARAKG----V-NVVLTTGRPYAGVHRYLKELHMEQ-PGDYCITNNGALVQKA 77 (270)
T ss_pred EEEEEecCCcCcCCCCccCHHHHHHHHHHHHCC----C-EEEEecCCChHHHHHHHHHhCCCC-CCCeEEEcCCeEEEEC
Confidence 366679999999988899999999999999997 7 899999999999999999988742 1358999999999864
Q ss_pred CCCc-ccCCcCCCChh-----hhh--ccccc-cccc-------hhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceE
Q 001492 858 GTYT-EEGGKLFPDPD-----YAS--HIDYR-WGCD-------GLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHC 921 (1067)
Q Consensus 858 ~~~~-~~~~~~~~d~~-----~~~--~i~~~-~~~~-------~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 921 (1067)
.... .....+..+.. +.. .+... +..+ .... .............. ...+..........+
T Consensus 78 ~~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~k 153 (270)
T PRK10513 78 ADGETVAQTALSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISY-YTVHESFLTGIPLV---FREVEKMDPNLQFPK 153 (270)
T ss_pred CCCCEEEecCCCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcch-hHHHhhhhccCCcc---ccchhhccccCCceE
Confidence 2111 10000000000 000 00000 0000 0000 00000000000000 000000000112334
Q ss_pred EEEEecCCCchHHHHHHHHHHHh-cCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChh
Q 001492 922 ISYLIKDPSKARRIDDLRQKLRM-RGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYE 1000 (1067)
Q Consensus 922 i~~~~~~~~~~~~~~el~~~L~~-~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~ 1000 (1067)
+.+. .+. ..++++.+.+.. ....+.++.+.+. ++||+|+++|||+||++|++++||++++++| |||+.| | +
T Consensus 154 ~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~s~~~-~~eI~~~gvsKg~al~~l~~~~gi~~~~v~a-fGD~~N-D-i 225 (270)
T PRK10513 154 VMMI-DEP---EILDAAIARIPAEVKERYTVLKSAPY-FLEILDKRVNKGTGVKSLAEHLGIKPEEVMA-IGDQEN-D-I 225 (270)
T ss_pred EEEe-CCH---HHHHHHHHHhHHHhcCcEEEEEecCe-eEEEeCCCCChHHHHHHHHHHhCCCHHHEEE-ECCchh-h-H
Confidence 4332 211 233444444432 2345677777765 9999999999999999999999999999999 999999 9 9
Q ss_pred hhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhhc
Q 001492 1001 ELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVG 1061 (1067)
Q Consensus 1001 eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g 1061 (1067)
+||+.+|+||||+||. +++|..|+ +||.++++|||+++|++|.
T Consensus 226 ~Ml~~ag~~vAm~NA~---~~vK~~A~---------------~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 226 AMIEYAGVGVAMGNAI---PSVKEVAQ---------------FVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred HHHHhCCceEEecCcc---HHHHHhcC---------------eeccCCCcchHHHHHHHHh
Confidence 9999999999999999 77888888 9999999999999999985
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-30 Score=285.64 Aligned_cols=241 Identities=15% Similarity=0.187 Sum_probs=163.9
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||+++++.+++.++++|++++++| + .|+|||||++.++.+++++++++ +++||+||+.|++..
T Consensus 4 li~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G----~-~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~I~~~~ 74 (272)
T PRK15126 4 LAAFDMDGTLLMPDHHLGEKTLSTLARLRERD----I-TLTFATGRHVLEMQHILGALSLD----AYLITGNGTRVHSLE 74 (272)
T ss_pred EEEEeCCCcCcCCCCcCCHHHHHHHHHHHHCC----C-EEEEECCCCHHHHHHHHHHcCCC----CcEEecCCcEEEcCC
Confidence 55669999999988899999999999999997 7 89999999999999999998874 479999999998643
Q ss_pred CCcccCCcCCCChhhhhcccc--------------cccc-chhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEE
Q 001492 859 TYTEEGGKLFPDPDYASHIDY--------------RWGC-DGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCIS 923 (1067)
Q Consensus 859 ~~~~~~~~~~~d~~~~~~i~~--------------~~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~ 923 (1067)
+..... ..+........+.. .|.. .................. ............+++.
T Consensus 75 ~~~l~~-~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ki~ 147 (272)
T PRK15126 75 GELLHR-QDLPADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQ------LIDLKRLPAHGVTKIC 147 (272)
T ss_pred CCEEEe-ecCCHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceE------EecHHHccccCceEEE
Confidence 221100 00000111110100 0000 000000000000000000 0000000112345655
Q ss_pred EEecCCCchHHHHHHHHHHHhc-CCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhh
Q 001492 924 YLIKDPSKARRIDDLRQKLRMR-GLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEEL 1002 (1067)
Q Consensus 924 ~~~~~~~~~~~~~el~~~L~~~-~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eM 1002 (1067)
+.. ++ ..++++.+.+... ...+.++.+.+. ++||+|+++|||.||++|++++||++++++| |||+.| | ++|
T Consensus 148 ~~~-~~---~~~~~~~~~l~~~~~~~~~~~~s~~~-~~eI~~~g~sKg~al~~l~~~~gi~~~~v~a-fGD~~N-D-i~M 219 (272)
T PRK15126 148 FCG-DH---DDLTRLQIQLNEALGERAHLCFSATD-CLEVLPVGCNKGAALAVLSQHLGLSLADCMA-FGDAMN-D-REM 219 (272)
T ss_pred EEC-CH---HHHHHHHHHHHHHhcCCEEEEEcCCc-EEEeecCCCChHHHHHHHHHHhCCCHHHeEE-ecCCHH-H-HHH
Confidence 442 22 2345666656432 345677777665 9999999999999999999999999999999 999999 9 999
Q ss_pred hcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCcee--ecCcccHHHHHHHHHhhc
Q 001492 1003 ISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAH--VNANAKVDEIANALRQVG 1061 (1067)
Q Consensus 1003 L~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~--vt~~~~~dgI~~al~~~g 1061 (1067)
|+.+|+||||+||. +++|..|+ + ||.++++|||+++|++|-
T Consensus 220 l~~ag~~vAm~Na~---~~vK~~A~---------------~~~v~~~n~edGva~~l~~~~ 262 (272)
T PRK15126 220 LGSVGRGFIMGNAM---PQLRAELP---------------HLPVIGHCRNQAVSHYLTHWL 262 (272)
T ss_pred HHHcCCceeccCCh---HHHHHhCC---------------CCeecCCCcchHHHHHHHHHh
Confidence 99999999999999 77777776 4 778999999999999874
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-29 Score=273.50 Aligned_cols=236 Identities=24% Similarity=0.360 Sum_probs=181.4
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||+++++.+++.+ ++++ ++++| + .|+|||||++.++.+++..+++. .+|++||+||+.|++..
T Consensus 1 li~~DlDgTLl~~~~~~~~~~-~~~~-~~~~g----i-~~viaTGR~~~~v~~~~~~l~l~--~~~~~I~~nGa~i~~~~ 71 (236)
T TIGR02471 1 LIITDLDNTLLGDDEGLASFV-ELLR-GSGDA----V-GFGIATGRSVESAKSRYAKLNLP--SPDVLIARVGTEIYYGP 71 (236)
T ss_pred CeEEeccccccCCHHHHHHHH-HHHH-hcCCC----c-eEEEEeCCCHHHHHHHHHhCCCC--CCCEEEECCCceEEeCC
Confidence 467899999988888888877 7776 56665 7 89999999999999999998874 47899999999998753
Q ss_pred CCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCCchHHHHHH
Q 001492 859 TYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDL 938 (1067)
Q Consensus 859 ~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~el 938 (1067)
....+..|..++...|....+...+..+++...+ .......+++.|...+ .....+.++
T Consensus 72 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~i~~~~~~-~~~~~~~~~ 130 (236)
T TIGR02471 72 -------ELQPDRFWQKHIDHDWRRQAVVEALADIPGLTLQ-------------DDQEQGPFKISYLLDP-EGEPILPQI 130 (236)
T ss_pred -------CCCCChhHHHHHhcCCCHHHHHHHHhcCCCcEeC-------------ChhcCCCeeEEEEECc-ccchHHHHH
Confidence 2234566776776677655444433333321111 1122346788777643 222345667
Q ss_pred HHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCccc
Q 001492 939 RQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEK 1018 (1067)
Q Consensus 939 ~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~ 1018 (1067)
.+.+...+..+.++.+.+. ++||+|+++|||.||++|++++|++++++++ |||+.| | ++||+.+|+||+|+||.
T Consensus 131 ~~~l~~~~~~~~~~~~~~~-~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~-~GD~~n-D-~~ml~~~~~~iav~na~-- 204 (236)
T TIGR02471 131 RQRLRQQSQAAKVILSCGW-FLDVLPLRASKGLALRYLSYRWGLPLEQILV-AGDSGN-D-EEMLRGLTLGVVVGNHD-- 204 (236)
T ss_pred HHHHHhccCCEEEEEECCc-eEEEeeCCCChHHHHHHHHHHhCCCHHHEEE-EcCCcc-H-HHHHcCCCcEEEEcCCc--
Confidence 7777766666777778775 8999999999999999999999999999999 999999 9 99999999999999999
Q ss_pred chhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhhcc
Q 001492 1019 GSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVGK 1062 (1067)
Q Consensus 1019 ~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g~ 1062 (1067)
+++|..|+ ....|||++..++||+++|++|+.
T Consensus 205 -~~~k~~a~-----------~~~~~v~~~~~~~Gv~~~i~~~~~ 236 (236)
T TIGR02471 205 -PELEGLRH-----------QQRIYFANNPHAFGILEGINHYDF 236 (236)
T ss_pred -HHHHHhhc-----------CCcEEEcCCCChhHHHHHHHhhCC
Confidence 66666665 123368889999999999999974
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-28 Score=291.57 Aligned_cols=279 Identities=19% Similarity=0.215 Sum_probs=211.4
Q ss_pred CCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChh--hhhhHhHHHHhHHHhhcccccCCEEE
Q 001492 304 VWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKE--DINSTYKIMRRIEGEELSLDAAELVI 381 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~--~i~~~y~~~~ri~~E~~~l~~Ad~Vi 381 (1067)
.++||+|++.+..... +++.....+|.++++|+-.... ...... .++..|... ....+.+|.||
T Consensus 210 ~~~di~i~dr~~~~~~-~~~~~~~~~~~v~~lH~~h~~~-------~~~~~~~~~~~~~y~~~------~~~~~~~D~iI 275 (500)
T TIGR02918 210 TKKDIIILDRSTGIGQ-AVLENKGPAKLGVVVHAEHFSE-------SATNETYILWNNYYEYQ------FSNADYIDFFI 275 (500)
T ss_pred CCCCEEEEcCCcccch-HHHhcCCCceEEEEEChhhhcC-------ccCcchhHHHHHHHHHH------HhchhhCCEEE
Confidence 3589999987643222 2445556899999999742111 000000 011112111 12367889999
Q ss_pred eCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCC
Q 001492 382 TSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSP 461 (1067)
Q Consensus 382 ~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1067)
++|+...+.+...+.. ++...+++.+||+|++...+.+..
T Consensus 276 ~~S~~~~~~l~~~~~~-------------------~~~~~~ki~viP~g~~~~~~~~~~--------------------- 315 (500)
T TIGR02918 276 TATDIQNQILKNQFKK-------------------YYNIEPRIYTIPVGSLDELQYPEQ--------------------- 315 (500)
T ss_pred ECCHHHHHHHHHHhhh-------------------hcCCCCcEEEEcCCCcccccCccc---------------------
Confidence 9999776665443321 111224899999998654432211
Q ss_pred CCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHH
Q 001492 462 KAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLK 540 (1067)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~ 540 (1067)
......|+++||+.+.||++.+++|+..+. ...|++.| |+|+++. ...+.+
T Consensus 316 ---------------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~--~~~p~~~l~i~G~G~~-----------~~~l~~ 367 (500)
T TIGR02918 316 ---------------ERKPFSIITASRLAKEKHIDWLVKAVVKAK--KSVPELTFDIYGEGGE-----------KQKLQK 367 (500)
T ss_pred ---------------ccCCeEEEEEeccccccCHHHHHHHHHHHH--hhCCCeEEEEEECchh-----------HHHHHH
Confidence 123457999999999999999999999985 45678887 8898864 255678
Q ss_pred HHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCC-CchhhhccCCceEE
Q 001492 541 LIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNG-GPVDIHRALNNGLL 619 (1067)
Q Consensus 541 l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~G-g~~eiv~~~~~Gll 619 (1067)
++..+++.+.|.|.|+. ++.++|+.| |+||+||..||||++++||||||+|||+++.+ |+.|+|.++.+|++
T Consensus 368 ~i~~~~l~~~V~f~G~~---~~~~~~~~a----dv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~l 440 (500)
T TIGR02918 368 IINENQAQDYIHLKGHR---NLSEVYKDY----ELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYL 440 (500)
T ss_pred HHHHcCCCCeEEEcCCC---CHHHHHHhC----CEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEE
Confidence 88899999999999963 799999999 99999999999999999999999999999985 89999999999999
Q ss_pred eCCC----C----HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Q 001492 620 VDPH----D----QQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 620 v~p~----d----~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~ 672 (1067)
+++. | ++++|++|.++++ ++.+++|++++++.++.|||+.++++|.++|+++
T Consensus 441 v~~~~~~~d~~~~~~~la~~I~~ll~-~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 441 IPIDEEEDDEDQIITALAEKIVEYFN-SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVREV 500 (500)
T ss_pred EeCCccccchhHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 9843 3 8899999999995 5678999999999889999999999999998753
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-28 Score=273.49 Aligned_cols=267 Identities=24% Similarity=0.283 Sum_probs=209.3
Q ss_pred CCceEEEEcCC-chhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEe
Q 001492 304 VWPYVIHGHYA-DAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVIT 382 (1067)
Q Consensus 304 ~~pDvIh~h~~-~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~ 382 (1067)
.+||+||+|.. .....+.+..+. ++|+|++.|+......... .. .. ..+...+..+|.+++
T Consensus 80 ~~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~------~~-----~~------~~~~~~~~~~d~ii~ 141 (353)
T cd03811 80 EKPDVVISHLTTTPNVLALLAARL-GTKLIVWEHNSLSLELKRK------LR-----LL------LLIRKLYRRADKIVA 141 (353)
T ss_pred cCCCEEEEcCccchhHHHHHHhhc-CCceEEEEcCcchhhhccc------hh-----HH------HHHHhhccccceEEE
Confidence 46999999987 444444444443 8999999999855432110 00 00 124567899999999
Q ss_pred CCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCC
Q 001492 383 STKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPK 462 (1067)
Q Consensus 383 ~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1067)
.|+...+.+...+.. +..++.+||||+|...+.+.....
T Consensus 142 ~s~~~~~~~~~~~~~----------------------~~~~~~vi~~~~~~~~~~~~~~~~------------------- 180 (353)
T cd03811 142 VSEGVKEDLLKLLGI----------------------PPDKIEVIYNPIDIEEIRALAEEP------------------- 180 (353)
T ss_pred eccchhhhHHHhhcC----------------------CccccEEecCCcChhhcCcccchh-------------------
Confidence 999888777665542 113899999999998776543100
Q ss_pred CcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHH
Q 001492 463 AIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKL 541 (1067)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l 541 (1067)
..+....+++.|+++||+.+.||++.+++|+..+.. ..+++.+ ++|+++.. ..+.+.
T Consensus 181 ---------~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~--~~~~~~l~i~G~~~~~-----------~~~~~~ 238 (353)
T cd03811 181 ---------LELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRK--EGPDARLVILGDGPLR-----------EELEAL 238 (353)
T ss_pred ---------hhcCCCCCceEEEEEecchhhcChHHHHHHHHHhhh--cCCCceEEEEcCCccH-----------HHHHHH
Confidence 011224567899999999999999999999999963 3456665 77877643 344577
Q ss_pred HHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeC
Q 001492 542 IDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVD 621 (1067)
Q Consensus 542 ~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~ 621 (1067)
+..+++.++|.|.|+ .+++..+|+.| |++|+||..|+||++++|||++|+|||+++.||..|++.++.+|++++
T Consensus 239 ~~~~~~~~~v~~~g~--~~~~~~~~~~~----d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~ 312 (353)
T cd03811 239 AKELGLADRVHFLGF--QSNPYPYLKAA----DLFVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLVP 312 (353)
T ss_pred HHhcCCCccEEEecc--cCCHHHHHHhC----CEEEeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEEC
Confidence 888899999999998 46899999999 999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHH---HHHHHHhhcCHHHHHHHHHHHHHHH-HcCC
Q 001492 622 PHDQQAI---ADALLKLVSEKNLWVECRKNGWKNI-HLFS 657 (1067)
Q Consensus 622 p~d~~~l---a~aL~~ll~d~~~~~~~~~~~~~~~-~~fs 657 (1067)
+.|.+++ +++|..++.+++.++++++++++.+ ++|+
T Consensus 313 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 313 VGDEAALAAAALALLDLLLDPELRERLAAAARERVAREYS 352 (353)
T ss_pred CCCHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc
Confidence 9999999 7888888889999999999877776 4665
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-27 Score=278.40 Aligned_cols=330 Identities=18% Similarity=0.142 Sum_probs=221.9
Q ss_pred hHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCccccc
Q 001492 192 GQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKEL 271 (1067)
Q Consensus 192 G~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k~~ 271 (1067)
|.+.++..++..|+++|+ ++|++++.... +...+ .....|++++++|. +... .....
T Consensus 16 g~~~r~~~~~~~l~~~~~-~~v~vi~~~~~--------~~~~~------------~~~~~~v~v~r~~~-~~~~-~~~~~ 72 (371)
T PLN02275 16 GRSPRMQYHALSLARQAS-FQVDVVAYGGS--------EPIPA------------LLNHPSIHIHLMVQ-PRLL-QRLPR 72 (371)
T ss_pred CCCHHHHHHHHHHHhcCC-ceEEEEEecCC--------CCCHH------------HhcCCcEEEEECCC-cccc-ccccc
Confidence 455677888999998873 57999986321 11111 11235899999986 3211 11111
Q ss_pred ccc---hhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc---hhHHHHHHHhcCCCcEEEEeCCCchhhHHH
Q 001492 272 LWP---YIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD---AGDSAALLSGALNVPMVLTGHSLGRNKLEQ 345 (1067)
Q Consensus 272 l~~---~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~---a~~~a~~l~~~~giP~V~t~H~l~~~~~~~ 345 (1067)
++. |+..... .+ ..+...+.. +..+||+||+|.+. +...+.++++..++|+|+|.|+++..
T Consensus 73 ~~~~~~~~~~~~~-~~---~~~~~~~~~-----~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~---- 139 (371)
T PLN02275 73 VLYALALLLKVAI-QF---LMLLWFLCV-----KIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT---- 139 (371)
T ss_pred chHHHHHHHHHHH-HH---HHHHHHHHh-----hCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH----
Confidence 222 1211111 11 111111100 02579999998742 24456667777899999999998522
Q ss_pred HHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEE
Q 001492 346 LLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMV 425 (1067)
Q Consensus 346 l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~ 425 (1067)
....|.... ...+++.+++ |+..++.||.||++|+...+.+.+.+ |+ ++.
T Consensus 140 ~~~~~~~~~---~~~~~~~~~~--e~~~~~~ad~ii~~S~~~~~~l~~~~-----------------g~--------~i~ 189 (371)
T PLN02275 140 LLALSLGRS---HPLVRLYRWY--ERHYGKMADGHLCVTKAMQHELDQNW-----------------GI--------RAT 189 (371)
T ss_pred HHhcccCCC---CHHHHHHHHH--HHHHHhhCCEEEECCHHHHHHHHHhc-----------------CC--------CeE
Confidence 112222111 1123344443 77789999999999998877653322 11 378
Q ss_pred EeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhc
Q 001492 426 VIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGEC 505 (1067)
Q Consensus 426 vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l 505 (1067)
+||||. .+.|.+.... .. ...+...+|+++||+.+.||++.+++|+..+
T Consensus 190 vi~n~~-~~~f~~~~~~-----------------------------~~-~~~~~~~~i~~~grl~~~k~~~~li~a~~~l 238 (371)
T PLN02275 190 VLYDQP-PEFFRPASLE-----------------------------IR-LRPNRPALVVSSTSWTPDEDFGILLEAAVMY 238 (371)
T ss_pred EECCCC-HHHcCcCCch-----------------------------hc-ccCCCcEEEEEeCceeccCCHHHHHHHHHHH
Confidence 999984 4556543210 00 0112345788999999999999999999877
Q ss_pred ccc---------------cCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEe-CCCCCCCCHHHHHHH
Q 001492 506 RPL---------------RELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAY-PKHHKQYDVPEIYRL 568 (1067)
Q Consensus 506 ~~l---------------~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~-~g~~~~~dl~~ly~~ 568 (1067)
... ...|++.+ |+|+|+.. .++.++++++++.+ |.| .|+++.++++.+|+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~~~-----------~~l~~~~~~~~l~~-v~~~~~~~~~~~~~~~l~~ 306 (371)
T PLN02275 239 DRRVAARLNESDSASGKQSLYPRLLFIITGKGPQK-----------AMYEEKISRLNLRH-VAFRTMWLEAEDYPLLLGS 306 (371)
T ss_pred HhhhhhccccccccccccccCCCeEEEEEeCCCCH-----------HHHHHHHHHcCCCc-eEEEcCCCCHHHHHHHHHh
Confidence 310 23467776 88999853 45678888899876 666 557899999999999
Q ss_pred hhcCCcEEEecC---CCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhh
Q 001492 569 AAKTKGVFINPA---LVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLV 636 (1067)
Q Consensus 569 A~~~~dV~v~ps---~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll 636 (1067)
| |+||+|+ ..|+||++++||||||+|||+++.||..|+|+++.+|++++ |+++++++|.+++
T Consensus 307 a----Dv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 307 A----DLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred C----CEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 9 9999863 24899999999999999999999999999999999999996 6999999999875
|
|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-28 Score=280.37 Aligned_cols=265 Identities=17% Similarity=0.213 Sum_probs=196.5
Q ss_pred CCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhH---HHHHh-hCCCChhhhhhHhHHHHhHHHhhcccccCCE
Q 001492 304 VWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKL---EQLLK-QGRQSKEDINSTYKIMRRIEGEELSLDAAEL 379 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~---~~l~~-~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~ 379 (1067)
.+||+||++...... .+....++|.+.++|+..+..+ ..+.. .+..........++.+++ .|+..++.+|.
T Consensus 82 ~~~D~v~~~~~~~~~---~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~ 156 (351)
T cd03804 82 SGYDLVISSSHAVAK---GVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRI--WDRRSAARVDY 156 (351)
T ss_pred cCCCEEEEcCcHHhc---cccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHH--HHHHHhcCCCE
Confidence 469999988652222 1224568999999997532111 11111 111111111112223333 36777999999
Q ss_pred EEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCC
Q 001492 380 VITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGS 459 (1067)
Q Consensus 380 Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~ 459 (1067)
|+++|+...+.+.+.+.. +..+||||+|.+.|.+..
T Consensus 157 ii~~S~~~~~~~~~~~~~-------------------------~~~vi~~~~d~~~~~~~~------------------- 192 (351)
T cd03804 157 FIANSRFVARRIKKYYGR-------------------------DATVIYPPVDTDRFTPAE------------------- 192 (351)
T ss_pred EEECCHHHHHHHHHHhCC-------------------------CcEEECCCCCHhhcCcCC-------------------
Confidence 999999888877554432 568999999998775322
Q ss_pred CCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHH
Q 001492 460 SPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVL 539 (1067)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~ 539 (1067)
...+.++++||+.+.||++.+++|+..++ .-.+|+|+++..+. +.
T Consensus 193 ------------------~~~~~il~~G~~~~~K~~~~li~a~~~~~------~~l~ivG~g~~~~~-----------l~ 237 (351)
T cd03804 193 ------------------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG------KRLVVIGDGPELDR-----------LR 237 (351)
T ss_pred ------------------CCCCEEEEEEcCccccChHHHHHHHHHCC------CcEEEEECChhHHH-----------HH
Confidence 23467999999999999999999999873 12358888764322 22
Q ss_pred HHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEE
Q 001492 540 KLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLL 619 (1067)
Q Consensus 540 ~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gll 619 (1067)
+ +..++|.|+|+++.+++..+|+.| |++|+||. |+||++++||||||+|||+++.||..|++.++.+|++
T Consensus 238 ~-----~~~~~V~~~g~~~~~~~~~~~~~a----d~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~ 307 (351)
T cd03804 238 A-----KAGPNVTFLGRVSDEELRDLYARA----RAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGIL 307 (351)
T ss_pred h-----hcCCCEEEecCCCHHHHHHHHHhC----CEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEE
Confidence 2 345789999999999999999999 99999999 9999999999999999999999999999999999999
Q ss_pred eCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHH
Q 001492 620 VDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTY 665 (1067)
Q Consensus 620 v~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~ 665 (1067)
++|.|+++++++|.+++++++ .+++.+.+.++.|+|+.+.+++
T Consensus 308 ~~~~~~~~la~~i~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 350 (351)
T cd03804 308 FEEQTVESLAAAVERFEKNED---FDPQAIRAHAERFSESRFREKI 350 (351)
T ss_pred eCCCCHHHHHHHHHHHHhCcc---cCHHHHHHHHHhcCHHHHHHHh
Confidence 999999999999999999984 2344445555679999988765
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.6e-28 Score=282.78 Aligned_cols=374 Identities=14% Similarity=0.119 Sum_probs=239.3
Q ss_pred ceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCC------CcccccCC
Q 001492 165 KLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYG------EPAEMLTG 238 (1067)
Q Consensus 165 ~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~------~~~e~l~~ 238 (1067)
+-+|++|+.-.+ |=..|....-+-=|..|++.|+ ++|+++.+=....+-..-|+ .|.|...-
T Consensus 322 ~r~~~ivTtAsl-----------PWmTGtavnpL~rAayLa~~~~-~~VtlviPWl~~~dq~~vy~~~~~F~~p~eQe~~ 389 (794)
T PLN02501 322 KRHVAIVTTASL-----------PWMTGTAVNPLFRAAYLAKSAK-QNVTLLVPWLCKSDQELVYPNNLTFSSPEEQESY 389 (794)
T ss_pred CCeEEEEEcccC-----------cccccccccHHHHHHHhcccCC-ceEEEEEecCCccccccccCCCcccCCHHHHHHH
Confidence 357898887666 3233444444445778898865 99999876332212112222 22211110
Q ss_pred CCCCCCccccccCCeEEEeccCCCCccCc-ccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc-h
Q 001492 239 GPEDDGIEVGESSGAYIIRIPFGPRDKYL-RKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD-A 316 (1067)
Q Consensus 239 ~~~~~~~~~~~~~gv~i~ri~~~~~~~~l-~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~-a 316 (1067)
.+.+..++++-.++..|...|. +|. .+..+.|. -.+.+.|.+ +.|||||.+.+. .
T Consensus 390 ir~wl~~r~g~~~~~~i~fYpg----~~~~~~~SI~p~------------gdI~~~L~~-------f~PDVVHLatP~~L 446 (794)
T PLN02501 390 IRNWLEERIGFKADFKISFYPG----KFSKERRSIIPA------------GDTSQFIPS-------KDADIAILEEPEHL 446 (794)
T ss_pred HHHHHHHhcCCCCCceEEeecc----hhccCCccccch------------HHHHHHhhc-------cCCCEEEECCchhh
Confidence 0111222233334444444442 121 22233331 111122222 679999999983 5
Q ss_pred hHH--HHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccc-cCCEEEeCCHHHHHHHHh
Q 001492 317 GDS--AALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLD-AAELVITSTKQEIDEQWG 393 (1067)
Q Consensus 317 ~~~--a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~-~Ad~Vi~~S~~~~~~~~~ 393 (1067)
|+. +..++++++ |+|.++|.-+..+...+ ..|.+.. ..++.++++ ..+ +||.|+++|.... .+
T Consensus 447 Gw~~~Glr~ArKl~-PVVasyHTny~eYl~~y-~~g~L~~----~llk~l~~~-----v~r~hcD~VIaPS~atq-~L-- 512 (794)
T PLN02501 447 NWYHHGKRWTDKFN-HVVGVVHTNYLEYIKRE-KNGALQA----FFVKHINNW-----VTRAYCHKVLRLSAATQ-DL-- 512 (794)
T ss_pred ccHHHHHHHHHHcC-CeEEEEeCCcHHHHhHh-cchhHHH----HHHHHHHHH-----HHHhhCCEEEcCCHHHH-Hh--
Confidence 666 888899999 99999999877654433 1222111 111122221 111 1899999996544 22
Q ss_pred hcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhh
Q 001492 394 LYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMR 473 (1067)
Q Consensus 394 ~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (1067)
.. ++....+|||.+.|.|..... ....
T Consensus 513 --~~-------------------------~vI~nVnGVDte~F~P~~r~~--------------------------~~r~ 539 (794)
T PLN02501 513 --PK-------------------------SVICNVHGVNPKFLKIGEKVA--------------------------EERE 539 (794)
T ss_pred --cc-------------------------cceeecccccccccCCcchhH--------------------------HHHh
Confidence 00 112222699999998764200 0011
Q ss_pred hccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEE
Q 001492 474 FLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVA 552 (1067)
Q Consensus 474 ~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~ 552 (1067)
+......+.++|+||+.+.||++.||+|+..+. ...+++.| |+|+|+.. .++..++.++++ .|.
T Consensus 540 lgi~~~~kgiLfVGRLa~EKGld~LLeAla~L~--~~~pnvrLvIVGDGP~r-----------eeLe~la~eLgL--~V~ 604 (794)
T PLN02501 540 LGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHK--NELDGFNLDVFGNGEDA-----------HEVQRAAKRLDL--NLN 604 (794)
T ss_pred cCCccccCceEEEEcccccCCHHHHHHHHHHHH--hhCCCeEEEEEcCCccH-----------HHHHHHHHHcCC--EEE
Confidence 222223356899999999999999999999885 34567775 89999864 445667777777 489
Q ss_pred eCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHH
Q 001492 553 YPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADAL 632 (1067)
Q Consensus 553 ~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL 632 (1067)
|+|. .+++..+|+.+ ||||+||.+|+||++++||||||+|||++++||. +++.++.+|++. .|+++++++|
T Consensus 605 FLG~--~dd~~~lyasa----DVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~--~D~EafAeAI 675 (794)
T PLN02501 605 FLKG--RDHADDSLHGY----KVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY--KTSEDFVAKV 675 (794)
T ss_pred ecCC--CCCHHHHHHhC----CEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--CCHHHHHHHH
Confidence 9998 46778899999 9999999999999999999999999999999985 446677788876 6899999999
Q ss_pred HHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 001492 633 LKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRV 669 (1067)
Q Consensus 633 ~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~ 669 (1067)
.+++.++..+..+.. ...|||+..++++++.-
T Consensus 676 ~~LLsd~~~rl~~~a-----~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 676 KEALANEPQPLTPEQ-----RYNLSWEAATQRFMEYS 707 (794)
T ss_pred HHHHhCchhhhHHHH-----HhhCCHHHHHHHHHHhh
Confidence 999998875433321 34899999999998754
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=290.35 Aligned_cols=344 Identities=17% Similarity=0.167 Sum_probs=241.9
Q ss_pred ccccccchhHHHH----------HHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcC-CCcEEEEeC
Q 001492 268 RKELLWPYIQEFV----------DGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGAL-NVPMVLTGH 336 (1067)
Q Consensus 268 ~k~~l~~~l~~f~----------~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~-giP~V~t~H 336 (1067)
.+..+||.+..+. ......-..++.++.+.+. .-|+|.+|+.-...++.++.+.. ..++.+..|
T Consensus 85 ~n~~lWPl~H~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~-----~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH 159 (456)
T TIGR02400 85 SNSTLWPLFHYRPDLIRYDRKAWEAYRRVNRLFAEALAPLLQ-----PGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLH 159 (456)
T ss_pred hhhhcchhhcccccccccCHHHHHHHHHHHHHHHHHHHHhCC-----CCCEEEEecchhhHHHHHHHhhCCCCeEEEEEe
Confidence 4556777654321 2222333445666666443 24899999886666666666554 468889999
Q ss_pred CCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHH-hcCcc
Q 001492 337 SLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARA-RRGVN 415 (1067)
Q Consensus 337 ~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~-~~Gv~ 415 (1067)
..++.. +-+ .. ++. .-.+ -..+-.||.|...|..+.+.+.... .+.|+.+. ..++.
T Consensus 160 ipfP~~-e~f-~~--lp~-----r~~i-------l~gll~~dligF~t~~~~~~Fl~~~-------~~~l~~~~~~~~~~ 216 (456)
T TIGR02400 160 IPFPSS-EIY-RT--LPW-----RREL-------LEGLLAYDLVGFQTYDDARNFLSAV-------SRELGLETLPNGVE 216 (456)
T ss_pred CCCCCh-HHH-hh--CCc-----HHHH-------HHHHhcCCEEEECCHHHHHHHHHHH-------HHHhCCcccCCceE
Confidence 775533 111 00 010 1112 2346789999999999988775532 23333221 22444
Q ss_pred cCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCH
Q 001492 416 CHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNI 495 (1067)
Q Consensus 416 ~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi 495 (1067)
..|+.. ++.+||||||++.|.+....+++....+ ..+.++ +++++|+++||+++.||+
T Consensus 217 ~~g~~~-~v~viP~GID~~~f~~~~~~~~~~~~~~------------------~lr~~~---~~~~vIl~VgRLd~~KGi 274 (456)
T TIGR02400 217 SGGRTV-RVGAFPIGIDVDRFAEQAKKPSVQKRIA------------------ELRESL---KGRKLIIGVDRLDYSKGL 274 (456)
T ss_pred ECCcEE-EEEEecCcCCHHHHHHHhcChhHHHHHH------------------HHHHHc---CCCeEEEEccccccccCH
Confidence 444444 8999999999999976542222111111 111122 477899999999999999
Q ss_pred HHHHHHHHhcccccCCCc----EEE-EE-----ecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHH
Q 001492 496 TTLLKAFGECRPLRELAN----LTL-IM-----GNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEI 565 (1067)
Q Consensus 496 ~~ll~A~~~l~~l~~~~~----l~l-Iv-----G~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~l 565 (1067)
..+++||+.+. ...|+ +.+ ++ |+++.+++++....+..++|+...+..++.+.+.+.+.++.++++++
T Consensus 275 ~~ll~A~~~ll--~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~al 352 (456)
T TIGR02400 275 PERLLAFERFL--EEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMAL 352 (456)
T ss_pred HHHHHHHHHHH--HhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHH
Confidence 99999999984 44554 333 34 33455556655555555666666666777787788899999999999
Q ss_pred HHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCC----EEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhc-CHH
Q 001492 566 YRLAAKTKGVFINPALVEPFGLTLIEAAAHGLP----MVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVS-EKN 640 (1067)
Q Consensus 566 y~~A~~~~dV~v~ps~~EgfgltllEAmA~G~P----VVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~-d~~ 640 (1067)
|+.| ||||+||.+||||++++||||||+| ||+|+.+|..+.+. +|++|+|+|++++|++|.++++ +++
T Consensus 353 y~aa----Dv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~gllVnP~d~~~lA~aI~~aL~~~~~ 425 (456)
T TIGR02400 353 YRAA----DVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GALLVNPYDIDGMADAIARALTMPLE 425 (456)
T ss_pred HHhC----cEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHhC---CcEEECCCCHHHHHHHHHHHHcCCHH
Confidence 9999 9999999999999999999999999 88888777777663 7999999999999999999999 457
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 001492 641 LWVECRKNGWKNIHLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 641 ~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~ 670 (1067)
+++++.+..++.+..||+..|+++|++.+.
T Consensus 426 er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 426 EREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 778888888888888999999999997653
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-28 Score=285.70 Aligned_cols=276 Identities=18% Similarity=0.237 Sum_probs=215.9
Q ss_pred CCceEEEEcCCc-hhHHHHHHHhcCCCc-EEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEE
Q 001492 304 VWPYVIHGHYAD-AGDSAALLSGALNVP-MVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVI 381 (1067)
Q Consensus 304 ~~pDvIh~h~~~-a~~~a~~l~~~~giP-~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi 381 (1067)
..+|++|+++.. .+..+..+.+..+.+ +|.+.|+..... ... ...+... .+.+++.+|.|+
T Consensus 126 ~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~--~~~----------~~~~~~~-----~~~~~~~~d~ii 188 (407)
T cd04946 126 GQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYE--DRY----------PSGYIPL-----RRYLLSSLDAVF 188 (407)
T ss_pred cCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhh--hhc----------cccchHH-----HHHHHhcCCEEE
Confidence 457899997653 455555667777766 999999753211 000 0111111 233578999999
Q ss_pred eCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCC
Q 001492 382 TSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSP 461 (1067)
Q Consensus 382 ~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1067)
++|+...+.+.+.|+. ...++.++|+|++...+.+..
T Consensus 189 ~~S~~~~~~l~~~~~~----------------------~~~ki~vi~~gv~~~~~~~~~--------------------- 225 (407)
T cd04946 189 PCSEQGRNYLQKRYPA----------------------YKEKIKVSYLGVSDPGIISKP--------------------- 225 (407)
T ss_pred ECCHHHHHHHHHHCCC----------------------ccccEEEEECCcccccccCCC---------------------
Confidence 9999988877655543 223889999999987664321
Q ss_pred CCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHH
Q 001492 462 KAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLK 540 (1067)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~ 540 (1067)
...+.+.|+++||+.+.||++.+++|+..+.......++.+ ++|+++. ...+..
T Consensus 226 --------------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~-----------~~~l~~ 280 (407)
T cd04946 226 --------------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL-----------EDTLKE 280 (407)
T ss_pred --------------CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH-----------HHHHHH
Confidence 12356789999999999999999999999964222235554 7888764 244566
Q ss_pred HHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEe
Q 001492 541 LIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLV 620 (1067)
Q Consensus 541 l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv 620 (1067)
++...+..++|.|+|+++.+++..+|+.+ ..|+|++||..||||++++||||||+|||+|+.||..|++.++.+|+++
T Consensus 281 ~~~~~~~~~~V~f~G~v~~~e~~~~~~~~--~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~ 358 (407)
T cd04946 281 LAESKPENISVNFTGELSNSEVYKLYKEN--PVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLL 358 (407)
T ss_pred HHHhcCCCceEEEecCCChHHHHHHHhhc--CCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEe
Confidence 77677778899999999999999999863 1189999999999999999999999999999999999999999999999
Q ss_pred CCC-CHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHH
Q 001492 621 DPH-DQQAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYL 666 (1067)
Q Consensus 621 ~p~-d~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l 666 (1067)
++. |+++++++|.++++||+++++|+++|++.+ ++|||+...++|.
T Consensus 359 ~~~~~~~~la~~I~~ll~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 359 SKDPTPNELVSSLSKFIDNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred CCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 874 899999999999999999999999999999 5999999998875
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.9e-29 Score=294.03 Aligned_cols=353 Identities=17% Similarity=0.183 Sum_probs=235.5
Q ss_pred CCeEEEeccCCCCc-----cCcccccccchhHHHH----------HHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc
Q 001492 251 SGAYIIRIPFGPRD-----KYLRKELLWPYIQEFV----------DGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD 315 (1067)
Q Consensus 251 ~gv~i~ri~~~~~~-----~~l~k~~l~~~l~~f~----------~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~ 315 (1067)
.+..++.++..+.. ....+..+||.+..+. .........++.++.+.+. ..|+||.|++.
T Consensus 67 ~~~~~~~v~l~~~~~~~~y~~f~~~~LWp~~H~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~-----~~d~iwihDyh 141 (460)
T cd03788 67 GEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHYRLDLARFDREDWEAYVRVNRKFADAIAEVLR-----PGDLVWVHDYH 141 (460)
T ss_pred CCceEEEeeCCHHHHHHHHHHhhhhhcchhhcCCCCccccCHHHHHHHHHHHHHHHHHHHHhcC-----CCCEEEEeChh
Confidence 35566666543321 1223556788764432 2222233345555555433 36999999886
Q ss_pred hhHHHHHHHhc-CCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhh
Q 001492 316 AGDSAALLSGA-LNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGL 394 (1067)
Q Consensus 316 a~~~a~~l~~~-~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~ 394 (1067)
...++.++.+. .+.|+++.+|..++..- .+... + ....+++ .+-.+|.|...+......+...
T Consensus 142 l~llp~~lr~~~~~~~i~~f~HipfP~~e-~~~~l---p-----~~~~ll~-------~~l~~D~igF~t~~~~~~Fl~~ 205 (460)
T cd03788 142 LLLLPQMLRERGPDARIGFFLHIPFPSSE-IFRCL---P-----WREELLR-------GLLGADLIGFQTERYARNFLSC 205 (460)
T ss_pred hhHHHHHHHhhCCCCeEEEEEeCCCCChH-HHhhC---C-----ChHHHHH-------HHhcCCEEEECCHHHHHHHHHH
Confidence 55666666543 46899999998765441 11100 0 0111222 2456999999998877776553
Q ss_pred cCCCchHHHHHHHHHH--hcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhh
Q 001492 395 YDGFDVKLEKVLRARA--RRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVM 472 (1067)
Q Consensus 395 y~~~~~~l~~~l~~~~--~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (1067)
.. +.+.... ..++...|+. .++.+||||||++.|.+....++....+++
T Consensus 206 ~~-------~~l~~~~~~~~~i~~~g~~-~~i~vip~GID~~~f~~~~~~~~~~~~~~~--------------------- 256 (460)
T cd03788 206 CS-------RLLGLEVTDDGGVEYGGRR-VRVGAFPIGIDPDAFRKLAASPEVQERAAE--------------------- 256 (460)
T ss_pred HH-------HHcCCcccCCceEEECCEE-EEEEEEeCeEcHHHHHHHhcCchhHHHHHH---------------------
Confidence 21 1111110 1233333433 379999999999999765421111111111
Q ss_pred hhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc----EEE-EEecC-----CChhhhhccchHHHHHHHHHH
Q 001492 473 RFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELAN----LTL-IMGNR-----DDIEEMSSGNASVLITVLKLI 542 (1067)
Q Consensus 473 ~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~l-IvG~~-----~~~~~l~~~~~~~~~~i~~l~ 542 (1067)
.....+++++|+++||+++.||+..+++||+.+. ...|+ +.| ++|.. +.+++ +..++..++
T Consensus 257 ~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll--~~~p~~~~~v~Lv~vg~~~~g~~~~~~~-------l~~~l~~~v 327 (460)
T cd03788 257 LRERLGGRKLIVGVDRLDYSKGIPERLLAFERLL--ERYPEWRGKVVLVQIAVPSRTDVPEYQE-------LRREVEELV 327 (460)
T ss_pred HHHhcCCCEEEEEecCccccCCHHHHHHHHHHHH--HhChhhcCCEEEEEEccCCCcCcHHHHH-------HHHHHHHHH
Confidence 1122467889999999999999999999999884 34454 344 55432 22223 334444444
Q ss_pred Hhc-------CCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCC----EEEcCCCCchhhh
Q 001492 543 DKY-------DLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLP----MVATKNGGPVDIH 611 (1067)
Q Consensus 543 ~~~-------~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~P----VVat~~Gg~~eiv 611 (1067)
+++ ++.+.+.+.|.++.+++.++|+.| |+||+||..||||++++||||||+| ||+|+.+|..+.
T Consensus 328 ~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~a----Dv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~- 402 (460)
T cd03788 328 GRINGKFGTLDWTPVRYLYRSLPREELAALYRAA----DVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE- 402 (460)
T ss_pred HHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhc----cEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh-
Confidence 433 345556677889999999999999 9999999999999999999999999 888888777776
Q ss_pred ccCCceEEeCCCCHHHHHHHHHHhhcCH-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 001492 612 RALNNGLLVDPHDQQAIADALLKLVSEK-NLWVECRKNGWKNIHLFSWPEHCRTYLTRV 669 (1067)
Q Consensus 612 ~~~~~Gllv~p~d~~~la~aL~~ll~d~-~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~ 669 (1067)
+.+|++|+|+|++++|++|.++++++ ++++.+++++++.++.|||..|+++|+..+
T Consensus 403 --~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 403 --LSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred --cCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 46899999999999999999999965 677788888888889999999999998754
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=278.08 Aligned_cols=325 Identities=18% Similarity=0.212 Sum_probs=217.3
Q ss_pred CCceEEEEcCCchhHHHHHHH-hcCCCcEEEEeCCCchhhHHHHHhhCC--C-------ChhhhhhHhHHHHhHHHhhcc
Q 001492 304 VWPYVIHGHYADAGDSAALLS-GALNVPMVLTGHSLGRNKLEQLLKQGR--Q-------SKEDINSTYKIMRRIEGEELS 373 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~-~~~giP~V~t~H~l~~~~~~~l~~~g~--~-------~~~~i~~~y~~~~ri~~E~~~ 373 (1067)
.++||+|+|.|+++..+..++ ...++|+|+|.|....... +..|. + ..+.......+..+...|+.+
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~---l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~a 223 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRY---LCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAA 223 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccc---cccCCcccchhhhhcchhhhhhcccchHHHHHHHHH
Confidence 469999999999999999998 6678999999997643221 11111 0 011111223355666679999
Q ss_pred cccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCcccccccccc
Q 001492 374 LDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLI 453 (1067)
Q Consensus 374 l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~ 453 (1067)
...||.|+|+|+.+..+...+|+. +..+ |||||+|...|.+..+.....+..+
T Consensus 224 a~~Ad~fttVS~it~~E~~~Ll~~----------------------~pd~--ViPNGid~~~f~~~~e~~~~~~~~k--- 276 (590)
T cd03793 224 AHCAHVFTTVSEITAYEAEHLLKR----------------------KPDV--VLPNGLNVKKFSALHEFQNLHAQSK--- 276 (590)
T ss_pred HhhCCEEEECChHHHHHHHHHhCC----------------------CCCE--EeCCCcchhhcccchhhhhhhHHhh---
Confidence 999999999999999998877653 2223 9999999999976441111111111
Q ss_pred CCCCCCCCCCcchhhH-----hhhhhccCCCCcEEEE-EeCCCC-CCCHHHHHHHHHhcccccC--CCc---EEE-EEec
Q 001492 454 GGTDGSSPKAIPAIWS-----DVMRFLTNPHKPMILA-LSRPDP-KKNITTLLKAFGECRPLRE--LAN---LTL-IMGN 520 (1067)
Q Consensus 454 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~Il~-vgRld~-~Kgi~~ll~A~~~l~~l~~--~~~---l~l-IvG~ 520 (1067)
..+.+ .+.++..++++++++| +||+++ .||++.||+|+.++...-. ..+ +.+ |+..
T Consensus 277 -----------~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~ 345 (590)
T cd03793 277 -----------EKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPA 345 (590)
T ss_pred -----------hhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecC
Confidence 11122 1333445678888888 799999 9999999999999964211 121 223 4444
Q ss_pred CC---Chhhhhccc---------hHHH-----------------------------------------------------
Q 001492 521 RD---DIEEMSSGN---------ASVL----------------------------------------------------- 535 (1067)
Q Consensus 521 ~~---~~~~l~~~~---------~~~~----------------------------------------------------- 535 (1067)
.. ..+.++.+. .++.
T Consensus 346 ~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~ 425 (590)
T cd03793 346 KTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVD 425 (590)
T ss_pred ccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCc
Confidence 31 111222111 1110
Q ss_pred ---HHHHHHHHhcCCCC------cEEe-CCCCCC------CCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCE
Q 001492 536 ---ITVLKLIDKYDLYG------QVAY-PKHHKQ------YDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPM 599 (1067)
Q Consensus 536 ---~~i~~l~~~~~l~~------~V~~-~g~~~~------~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PV 599 (1067)
..|+..+.+.+|.+ +|.| |-+++. .+..++|+.| |+||+||++||||++++||||||+||
T Consensus 426 ~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~----dl~v~PS~yE~fG~~~lEAma~G~Pv 501 (590)
T cd03793 426 DANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGC----HLGVFPSYYEPWGYTPAECTVMGIPS 501 (590)
T ss_pred CccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhc----eEEEeccccCCCCcHHHHHHHcCCCE
Confidence 11222233333322 2344 334432 2588999999 99999999999999999999999999
Q ss_pred EEcCCCCc----hhhhccC-CceEEeC-------CCCHHHHHHHHHHhhcCHHHHHHHHHHHH--HHHHcCCHHHHHHHH
Q 001492 600 VATKNGGP----VDIHRAL-NNGLLVD-------PHDQQAIADALLKLVSEKNLWVECRKNGW--KNIHLFSWPEHCRTY 665 (1067)
Q Consensus 600 Vat~~Gg~----~eiv~~~-~~Gllv~-------p~d~~~la~aL~~ll~d~~~~~~~~~~~~--~~~~~fsw~~~a~~~ 665 (1067)
|+|+.+|+ .|++.++ ..|++|. +.+.++|+++|.++++. ++++++.+.++ +..+.|+|+..+..|
T Consensus 502 I~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y 580 (590)
T cd03793 502 ITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYY 580 (590)
T ss_pred EEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 99999988 5666544 3688886 45678899999998854 56676666655 555799999999999
Q ss_pred HHHHHHhHh
Q 001492 666 LTRVAACRM 674 (1067)
Q Consensus 666 l~~~~~~~~ 674 (1067)
.+.+...+.
T Consensus 581 ~~A~~~Al~ 589 (590)
T cd03793 581 RKARQLALS 589 (590)
T ss_pred HHHHHHHhh
Confidence 999987764
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=292.60 Aligned_cols=249 Identities=13% Similarity=0.102 Sum_probs=163.9
Q ss_pred eEEEEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCC-------EEEE
Q 001492 776 RLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFD-------ALIC 848 (1067)
Q Consensus 776 klllia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d-------~~I~ 848 (1067)
++-+|++|+||||+++++++++.++++|++++++| + .|+|||||++.++.++++.+++.. ++ ++||
T Consensus 307 ~iKLIa~DLDGTLLn~d~~Is~~t~eAI~kl~ekG----i-~~vIATGR~~~~i~~~l~~L~l~~--~~~~I~~~~p~I~ 379 (580)
T PLN02887 307 KFSYIFCDMDGTLLNSKSQISETNAKALKEALSRG----V-KVVIATGKARPAVIDILKMVDLAG--KDGIISESSPGVF 379 (580)
T ss_pred CccEEEEeCCCCCCCCCCccCHHHHHHHHHHHHCC----C-eEEEEcCCCHHHHHHHHHHhCccc--ccceEeecccEEe
Confidence 34467779999999988899999999999999997 7 899999999999999999987642 33 4667
Q ss_pred cCCceEEecCCCcccCCcCCCChhhh---------hcccc------ccccchhHHHHHhhhhcccCCCCCCCCCCCcccc
Q 001492 849 SSGGEMYYPGTYTEEGGKLFPDPDYA---------SHIDY------RWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQED 913 (1067)
Q Consensus 849 ~nGa~I~~~~~~~~~~~~~~~d~~~~---------~~i~~------~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 913 (1067)
+||+.|+...+..... ...+.... ..+.. .|...................... ....+.+.
T Consensus 380 ~NGA~I~d~~g~~I~~--~~L~~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~--~i~~l~~~ 455 (580)
T PLN02887 380 LQGLLVYGRQGREIYR--SNLDQEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAE--IMSSVDQL 455 (580)
T ss_pred ecCeEEEECCCcEEEE--EeCCHHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhcccccc--ccCCHHHh
Confidence 8999998643221000 00111000 00000 000000000000000000000000 00000000
Q ss_pred cccCCceEEEEEecCCCchHHHHHHHHHHHh-cCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEec
Q 001492 914 QKSSNAHCISYLIKDPSKARRIDDLRQKLRM-RGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILG 992 (1067)
Q Consensus 914 ~~~~~~~ki~~~~~~~~~~~~~~el~~~L~~-~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fG 992 (1067)
.......++.+.. ... .....+.+.+.. ....++++.+.+. ++||+|+++|||.||++|++++||+++++|| ||
T Consensus 456 ~~~~~i~Ki~~~~-~~e--~~~~~l~~~l~~~~~~~~~v~~S~~~-~lEI~p~gvSKG~ALk~L~e~lGI~~eeviA-FG 530 (580)
T PLN02887 456 LAAADIQKVIFLD-TAE--GVSSVLRPYWSEATGDRANVVQAQPD-MLEIVPPGTSKGNGVKMLLNHLGVSPDEIMA-IG 530 (580)
T ss_pred hcccCeeEEEEEc-ChH--HHHHHHHHHHHHHhcCcEEEEEecCc-EEEEecCCCCHHHHHHHHHHHcCCCHHHEEE-Ee
Confidence 0112244544432 211 112234444432 2345788888875 9999999999999999999999999999999 99
Q ss_pred CCCCCChhhhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhh
Q 001492 993 ESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQV 1060 (1067)
Q Consensus 993 Ds~N~D~~eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~ 1060 (1067)
|+.| | ++||+.+|+|||||||. +++|.+|+ +||.++++|||+++|++|
T Consensus 531 Ds~N-D-IeMLe~AG~gVAMgNA~---eeVK~~Ad---------------~VT~sNdEDGVA~aLek~ 578 (580)
T PLN02887 531 DGEN-D-IEMLQLASLGVALSNGA---EKTKAVAD---------------VIGVSNDEDGVADAIYRY 578 (580)
T ss_pred cchh-h-HHHHHHCCCEEEeCCCC---HHHHHhCC---------------EEeCCCCcCHHHHHHHHh
Confidence 9999 9 99999999999999999 77888888 999999999999999987
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=264.76 Aligned_cols=221 Identities=15% Similarity=0.168 Sum_probs=157.5
Q ss_pred EEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecCC
Q 001492 780 IALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPGT 859 (1067)
Q Consensus 780 ia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~~ 859 (1067)
|++|+||||+++++.+++.++++|++++++| + .|+|||||++.++.++++.+++ ++++||+||+.|++...
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~G----i-~~~~aTGR~~~~~~~~~~~l~~----~~~~i~~nGa~i~~~~~ 71 (225)
T TIGR01482 1 IASDIDGTLTDPNRAINESALEAIRKAESVG----I-PVVLVTGNSVQFARALAKLIGT----PDPVIAENGGEISYNEG 71 (225)
T ss_pred CeEeccCccCCCCcccCHHHHHHHHHHHHCC----C-EEEEEcCCchHHHHHHHHHhCC----CCeEEEecCcEEEeCCC
Confidence 4679999999988889999999999999997 7 8999999999999999999875 46899999999987632
Q ss_pred CcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCCchHHHHHHH
Q 001492 860 YTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDLR 939 (1067)
Q Consensus 860 ~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~el~ 939 (1067)
.. ..|...+...|....+.. ......... ..........++.+. . . .. .+.
T Consensus 72 ~~---------~~~~~~~~~~~~~~~~~~----~~~~~~~~~---------~~~~~~~~~~~~~~~-~--~-~~---~~~ 122 (225)
T TIGR01482 72 MD---------DIFLAYLEEEWFLDIVIA----KTFPFSRLK---------VQYPRRASLVKMRYG-I--D-VD---TVR 122 (225)
T ss_pred Cc---------eEEecccCHHHHHHHHHh----cccchhhhc---------cccccccceEEEeec-C--C-HH---HHH
Confidence 11 112222221111111100 000000000 000011112232221 1 1 11 233
Q ss_pred HHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCcccc
Q 001492 940 QKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKG 1019 (1067)
Q Consensus 940 ~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~~ 1019 (1067)
..+...+..+.+. +... ++||+|+++|||.||++|++++|++++++++ |||+.| | ++||+.+|+||||+||.
T Consensus 123 ~~~~~~~~~~~~~-~~~~-~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~-~GD~~N-D-i~m~~~ag~~vam~Na~--- 194 (225)
T TIGR01482 123 EIIKELGLNLVAV-DSGF-DIHILPQGVNKGVAVKKLKEKLGIKPGETLV-CGDSEN-D-IDLFEVPGFGVAVANAQ--- 194 (225)
T ss_pred HHHHhcCceEEEe-cCCc-EEEEeeCCCCHHHHHHHHHHHhCCCHHHEEE-ECCCHh-h-HHHHHhcCceEEcCChh---
Confidence 3333333334333 4454 8999999999999999999999999999999 999999 9 99999999999999999
Q ss_pred hhhhhcccCcCCCCCCCCCCCceeecCcccHHH----HHHHHHhhc
Q 001492 1020 SEELLRTTNLRDDIVPSESPLIAHVNANAKVDE----IANALRQVG 1061 (1067)
Q Consensus 1020 ~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dg----I~~al~~~g 1061 (1067)
+++|.+|+ +||.+++++| |+++|++||
T Consensus 195 ~~~k~~A~---------------~vt~~~~~~G~~~~v~~~l~~~~ 225 (225)
T TIGR01482 195 PELKEWAD---------------YVTESPYGEGGAEAIGEILQAIG 225 (225)
T ss_pred HHHHHhcC---------------eecCCCCCCcHHHHHHHHHHhhC
Confidence 67888888 9999999999 999999987
|
catalyze the same reaction as SPP. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=259.34 Aligned_cols=226 Identities=13% Similarity=0.117 Sum_probs=158.9
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||+++++.+++.++++|++++++| + .|+|||||++..+.+++..++++ +++||+||+.|+...
T Consensus 5 li~~DlDGTLl~~~~~i~~~~~~al~~l~~~G----~-~~~iaTGR~~~~~~~~~~~l~~~----~~~i~~nGa~i~~~~ 75 (230)
T PRK01158 5 AIAIDIDGTITDKDRRLSLKAVEAIRKAEKLG----I-PVILATGNVLCFARAAAKLIGTS----GPVIAENGGVISVGF 75 (230)
T ss_pred EEEEecCCCcCCCCCccCHHHHHHHHHHHHCC----C-EEEEEcCCchHHHHHHHHHhCCC----CcEEEecCeEEEEcC
Confidence 56669999999988889999999999999997 7 89999999999999999998873 479999999998752
Q ss_pred CCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCCchHHHHHH
Q 001492 859 TYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDL 938 (1067)
Q Consensus 859 ~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~el 938 (1067)
.... .+...+. .....+..+...+..... .+...........+. ... .. ..+++
T Consensus 76 ~~~~---------~~~~~~~------~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~-~~~-~~---~~~~~ 129 (230)
T PRK01158 76 DGKR---------IFLGDIE------ECEKAYSELKKRFPEAST------SLTKLDPDYRKTEVA-LRR-TV---PVEEV 129 (230)
T ss_pred CCCE---------EEEcchH------HHHHHHHHHHHhccccce------eeecCCcccccceee-ecc-cc---cHHHH
Confidence 1110 0111111 111111111111110000 000000000011111 111 11 12345
Q ss_pred HHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCccc
Q 001492 939 RQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEK 1018 (1067)
Q Consensus 939 ~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~ 1018 (1067)
.+.+...+..+.++.+ . .++||+|+++|||.|+++|++++|++++++++ |||+.| | ++||+.+|+||||+||.
T Consensus 130 ~~~l~~~~~~~~~~~~-~-~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~-~GD~~N-D-i~m~~~ag~~vam~Na~-- 202 (230)
T PRK01158 130 RELLEELGLDLEIVDS-G-FAIHIKSPGVNKGTGLKKLAELMGIDPEEVAA-IGDSEN-D-LEMFEVAGFGVAVANAD-- 202 (230)
T ss_pred HHHHHHcCCcEEEEec-c-eEEEEeeCCCChHHHHHHHHHHhCCCHHHEEE-ECCchh-h-HHHHHhcCceEEecCcc--
Confidence 5555544444555444 3 37999999999999999999999999999999 999999 9 99999999999999999
Q ss_pred chhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhhcc
Q 001492 1019 GSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVGK 1062 (1067)
Q Consensus 1019 ~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g~ 1062 (1067)
+++|..|+ |||.++++|||+++|++|.+
T Consensus 203 -~~vk~~a~---------------~v~~~n~~~Gv~~~l~~~~~ 230 (230)
T PRK01158 203 -EELKEAAD---------------YVTEKSYGEGVAEAIEHLLL 230 (230)
T ss_pred -HHHHHhcc---------------eEecCCCcChHHHHHHHHhC
Confidence 67777777 99999999999999999864
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-28 Score=269.20 Aligned_cols=244 Identities=13% Similarity=0.146 Sum_probs=159.7
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||+++++.+++.++++|++++++| + .|+|||||++..+.+++++++++ .+++||+||+.|+...
T Consensus 9 lI~~DlDGTLL~~~~~i~~~~~~ai~~l~~~G----i-~~viaTGR~~~~i~~~~~~l~~~---~~~~I~~NGa~I~~~~ 80 (271)
T PRK03669 9 LIFTDLDGTLLDSHTYDWQPAAPWLTRLREAQ----V-PVILCSSKTAAEMLPLQQTLGLQ---GLPLIAENGAVIQLDE 80 (271)
T ss_pred EEEEeCccCCcCCCCcCcHHHHHHHHHHHHcC----C-eEEEEcCCCHHHHHHHHHHhCCC---CCcEEEeCCCEEEecC
Confidence 55669999999988888999999999999997 7 89999999999999999998873 2479999999999753
Q ss_pred CCcccCCcCCCChhhhhccccccccchhHHHHHhhhh---ccc-CCCCC---------CCCCCCcccccccCCceEEEEE
Q 001492 859 TYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMN---TTE-GGENS---------KNSSSPIQEDQKSSNAHCISYL 925 (1067)
Q Consensus 859 ~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~---~~~-~~~~~---------~~~~~~~~~~~~~~~~~ki~~~ 925 (1067)
...... .+ ..+...+ ..+.+...+..... ... ..... .................++.+.
T Consensus 81 ~~~~~~-~~---~~~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (271)
T PRK03669 81 QWQDHP-DF---PRIISGI----SHGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWR 152 (271)
T ss_pred cccCCC-Cc---eEeecCC----CHHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEec
Confidence 211000 00 0001111 11111111111100 000 00000 0000000000000011222221
Q ss_pred ecCCCchHHHHHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCC---CcccEEEEecCCCCCChhhh
Q 001492 926 IKDPSKARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRL---NVANMFVILGESGDTDYEEL 1002 (1067)
Q Consensus 926 ~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi---~~e~vva~fGDs~N~D~~eM 1002 (1067)
.. ...+.++.+.+... .++++. .+ .++||+|+++|||+||++|++++|| +++++|| |||+.| | ++|
T Consensus 153 -~~---~~~~~~~~~~l~~~--~~~~~~-~~-~~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~via-fGDs~N-D-i~M 221 (271)
T PRK03669 153 -DS---DERMAQFTARLAEL--GLQFVQ-GA-RFWHVLDASAGKDQAANWLIATYQQLSGTRPTTLG-LGDGPN-D-APL 221 (271)
T ss_pred -CC---HHHHHHHHHHHHHC--CCEEEe-cC-eeEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEE-EcCCHH-H-HHH
Confidence 11 22345666666543 456555 33 4899999999999999999999999 9999999 999999 9 999
Q ss_pred hcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhhc
Q 001492 1003 ISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVG 1061 (1067)
Q Consensus 1003 L~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g 1061 (1067)
|+.+|+||||||+.+..+. .+..+...+|+|...+.|||.++|+||.
T Consensus 222 l~~ag~gvAM~~~~~~~~~------------l~~~~~~~~~~~~~~~~~g~~~~l~~~~ 268 (271)
T PRK03669 222 LDVMDYAVVVKGLNREGVH------------LQDDDPARVYRTQREGPEGWREGLDHFF 268 (271)
T ss_pred HHhCCEEEEecCCCCCCcc------------cccccCCceEeccCCCcHHHHHHHHHHH
Confidence 9999999999998832211 1234556679999999999999999984
|
|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=270.50 Aligned_cols=448 Identities=20% Similarity=0.224 Sum_probs=288.2
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCccccc------CCC
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEML------TGG 239 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l------~~~ 239 (1067)
|||++++.... |+ -.+||..-.+..|.++|++.| ++|.|+.+.+. .+...+....+.. ..+
T Consensus 1 M~Il~v~~E~~----p~-----vK~GGLaDv~~alpk~L~~~g--~~v~v~lP~y~--~~~~~~~~~~~~~~~~~~~~~~ 67 (487)
T COG0297 1 MKILFVASEIF----PF-----VKTGGLADVVGALPKALAKRG--VDVRVLLPSYP--KVQKEWRDLLKVVGKFGVLKGG 67 (487)
T ss_pred Ccceeeeeeec----Cc-----cccCcHHHHHHHhHHHHHhcC--CeEEEEcCCch--hhhhhhccccceeeEeeeeecc
Confidence 78998886554 22 579999999999999999999 99999988654 2222222110000 000
Q ss_pred CCC-CCccccc-cCCeEEEeccCCCCccCccc--ccccchhHHHHHHHHHHHHHHhHHHHhhhcCCC-CCCceEEEEcCC
Q 001492 240 PED-DGIEVGE-SSGAYIIRIPFGPRDKYLRK--ELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQ-PVWPYVIHGHYA 314 (1067)
Q Consensus 240 ~~~-~~~~~~~-~~gv~i~ri~~~~~~~~l~k--~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~-~~~pDvIh~h~~ 314 (1067)
... +..+... ..++.++-+.. + .+..+ ...+.+.+. ..+.. .+.++..+.+..+. ...|||||+|+|
T Consensus 68 ~~~~~~~~~~~~~~~v~~~lid~-~--~~f~r~~~~~~~~~d~----~~Rf~-~F~~a~~~~~~~~~~~~~pDIvH~hDW 139 (487)
T COG0297 68 RAQLFIVKEYGKDGGVDLYLIDN-P--ALFKRPDSTLYGYYDN----AERFA-FFSLAAAELAPLGLISWLPDIVHAHDW 139 (487)
T ss_pred cceEEEEEeecccCCCcEEEecC-h--hhcCccccccCCCCcH----HHHHH-HHHHHHHHHhhhcCCCCCCCEEEeecH
Confidence 000 1111111 11133332221 1 11111 122222221 11111 11222222222211 146999999999
Q ss_pred chhHHHHHHHh----cCCCcEEEEeCCCchhhHHH--HH-hhCCCChhhhhhHhH--HHHhHHHhhcccccCCEEEeCCH
Q 001492 315 DAGDSAALLSG----ALNVPMVLTGHSLGRNKLEQ--LL-KQGRQSKEDINSTYK--IMRRIEGEELSLDAAELVITSTK 385 (1067)
Q Consensus 315 ~a~~~a~~l~~----~~giP~V~t~H~l~~~~~~~--l~-~~g~~~~~~i~~~y~--~~~ri~~E~~~l~~Ad~Vi~~S~ 385 (1067)
.++.+..+++. ...+|.|+|+|++....... .. ..|. +..-.. .+. ..-.+..++..+..||.|.++|+
T Consensus 140 qt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgL-p~~~~~-~~~l~~~~~~~~lK~gi~~ad~vttVSp 217 (487)
T COG0297 140 QTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGL-PFEAYA-SFGLEFYGQISFLKGGLYYADAVTTVSP 217 (487)
T ss_pred HHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcC-CHHHhh-hceeeecCcchhhhhhheeccEEEEECH
Confidence 99999999988 44799999999874432211 11 1111 110000 000 00112346778999999999999
Q ss_pred HHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcc
Q 001492 386 QEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIP 465 (1067)
Q Consensus 386 ~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (1067)
..+++++ +..+...++..++.+. + ++.-|-||+|.+.+.|... ..+...+.... .+ ....
T Consensus 218 tYa~Ei~--t~~~g~gl~g~l~~~~-----~------~l~GI~NgiD~~~wnp~~d-----~~~~~~y~~~~-~~-~k~~ 277 (487)
T COG0297 218 TYAGEIY--TPEYGEGLEGLLSWRS-----G------KLSGILNGIDYDLWNPETD-----PYIAANYSAEV-LP-AKAE 277 (487)
T ss_pred HHHHhhc--cccccccchhhhhhcc-----c------cEEEEEeeEEecccCcccc-----cchhccCCccc-hh-hhHH
Confidence 9999987 3444444444443332 2 8899999999999987652 11111110000 00 0011
Q ss_pred hhhHhhhhhccC--CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHH
Q 001492 466 AIWSDVMRFLTN--PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLID 543 (1067)
Q Consensus 466 ~~~~~~~~~~~~--~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~ 543 (1067)
.......++..+ .+.|++.++||+..+||++.+++++..+.+ .. -..++.|.++ ..+.+.+..+..
T Consensus 278 nk~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~--~~-~~~vilG~gd---------~~le~~~~~la~ 345 (487)
T COG0297 278 NKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLE--QG-WQLVLLGTGD---------PELEEALRALAS 345 (487)
T ss_pred HHHHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHH--hC-ceEEEEecCc---------HHHHHHHHHHHH
Confidence 112223344443 367999999999999999999999999953 33 2335788873 335567777887
Q ss_pred hcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhcc--------CC
Q 001492 544 KYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRA--------LN 615 (1067)
Q Consensus 544 ~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~--------~~ 615 (1067)
++.. ++...-..+..-...+|+.| |++++||++|||||+-++||++|++.|+...||.+|.|.+ ..
T Consensus 346 ~~~~--~~~~~i~~~~~la~~i~aga----D~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~g 419 (487)
T COG0297 346 RHPG--RVLVVIGYDEPLAHLIYAGA----DVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVG 419 (487)
T ss_pred hcCc--eEEEEeeecHHHHHHHHhcC----CEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCce
Confidence 7754 66665555556677788888 9999999999999999999999999999999999998875 47
Q ss_pred ceEEeCCCCHHHHHHHHHHhhc---CHHH-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhcC
Q 001492 616 NGLLVDPHDQQAIADALLKLVS---EKNL-WVECRKNGWKNIHLFSWPEHCRTYLTRVAACRMRH 676 (1067)
Q Consensus 616 ~Gllv~p~d~~~la~aL~~ll~---d~~~-~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~~ 676 (1067)
+|+++.+.++++++.+|.+++. .+.. |+.+..+++. ..|+|+..+.+|.+.|+.++...
T Consensus 420 tGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~--~d~sw~~sa~~y~~lY~~~~~~~ 482 (487)
T COG0297 420 TGFLFLQTNPDHLANALRRALVLYRAPPLLWRKVQPNAMG--ADFSWDLSAKEYVELYKPLLSKP 482 (487)
T ss_pred eEEEEecCCHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc--cccCchhHHHHHHHHHHHHhccc
Confidence 8999999999999999999987 4444 8888888887 68999999999999999998653
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.95 E-value=8e-28 Score=262.78 Aligned_cols=234 Identities=18% Similarity=0.221 Sum_probs=162.1
Q ss_pred EEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecCC
Q 001492 780 IALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPGT 859 (1067)
Q Consensus 780 ia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~~ 859 (1067)
|++|+||||++++..++++++++|++++++| + .|+|||||++..+.+++.++++. +++||+||+.|+....
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~g----~-~~~i~TGR~~~~~~~~~~~~~~~----~~~I~~nGa~i~~~~~ 71 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGKISPETIEALKELQEKG----I-KLVIATGRSYSSIKRLLKELGID----DYFICSNGALIDDPKG 71 (254)
T ss_dssp EEEECCTTTCSTTSSSCHHHHHHHHHHHHTT----C-EEEEECSSTHHHHHHHHHHTTHC----SEEEEGGGTEEEETTT
T ss_pred cEEEECCceecCCCeeCHHHHHHHHhhcccc----e-EEEEEccCcccccccccccccch----hhhcccccceeeeccc
Confidence 4679999999988889999999999999997 7 79999999999999999998873 6999999999944432
Q ss_pred CcccCCcCCCChhhhhc---------ccc------cc-ccch---hHHHHHhhhhcccCCCCCCCCCCCcccccccCCce
Q 001492 860 YTEEGGKLFPDPDYASH---------IDY------RW-GCDG---LKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAH 920 (1067)
Q Consensus 860 ~~~~~~~~~~d~~~~~~---------i~~------~~-~~~~---l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (1067)
.... ....+...... +.. .| .... ............... .............
T Consensus 72 ~~l~--~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~i~ 142 (254)
T PF08282_consen 72 KILY--EKPIDSDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKES-------IVSEDDLEDEEIF 142 (254)
T ss_dssp EEEE--EESB-HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEE-------ESHHHHHHCSSES
T ss_pred ccch--hhheeccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccc-------cccccccccccce
Confidence 1110 00011110000 000 00 0000 000000000000000 0000111223456
Q ss_pred EEEEEecCCCchHHHHHHHHHHHhc-CCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCh
Q 001492 921 CISYLIKDPSKARRIDDLRQKLRMR-GLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDY 999 (1067)
Q Consensus 921 ki~~~~~~~~~~~~~~el~~~L~~~-~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~ 999 (1067)
++.+.. +. ..++.+.+.+... ...+.+..+... ++||+|+++|||.||++|++++|++++++++ |||+.| |
T Consensus 143 ki~~~~-~~---~~~~~l~~~l~~~~~~~~~~~~~~~~-~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~-~GD~~N-D- 214 (254)
T PF08282_consen 143 KILFFP-DP---EDLEQLREELKKKFPNLIDVVRSSPY-FLEITPKGVSKGSAIKYLLEYLGISPEDIIA-FGDSEN-D- 214 (254)
T ss_dssp EEEEES-CH---HHHHHHHHHHHHHHTTTEEEEEEETT-EEEEEETTSSHHHHHHHHHHHHTTSGGGEEE-EESSGG-G-
T ss_pred eeeccc-cc---hhhhhhhhhhccccCcceeEEEeccc-ceEEeeCCCCHHHHHHHHhhhcccccceeEE-eecccc-c-
Confidence 776443 22 2445565555543 233577777776 9999999999999999999999999999999 999999 9
Q ss_pred hhhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHH
Q 001492 1000 EELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANAL 1057 (1067)
Q Consensus 1000 ~eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al 1057 (1067)
++||+.+|+||||+||. ++++.+|+ ++|..++++||+++|
T Consensus 215 ~~Ml~~~~~~~am~na~---~~~k~~a~---------------~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 215 IEMLELAGYSVAMGNAT---PELKKAAD---------------YITPSNNDDGVAKAI 254 (254)
T ss_dssp HHHHHHSSEEEEETTS----HHHHHHSS---------------EEESSGTCTHHHHHH
T ss_pred HhHHhhcCeEEEEcCCC---HHHHHhCC---------------EEecCCCCChHHHhC
Confidence 99999999999999999 88899998 999999999999986
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.8e-26 Score=265.14 Aligned_cols=273 Identities=25% Similarity=0.340 Sum_probs=210.8
Q ss_pred CCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeC
Q 001492 304 VWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITS 383 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~ 383 (1067)
.++|+|+++....... ..+......+.|+++|+.......... ...+...|+ . ....+..+|.||++
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~~------~~~~~~~~~---~---~~~~~~~~d~ii~~ 164 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDPV------HSLINNFYE---Y---VFENLDKVDGVIVA 164 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCccccc------ccccchhhH---H---HHhChhhCCEEEEc
Confidence 3599999998644333 234444466789999975321110000 000111121 1 12246889999999
Q ss_pred CHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCC
Q 001492 384 TKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKA 463 (1067)
Q Consensus 384 S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1067)
|+...+.+...+... .++.+||||++...+.+..
T Consensus 165 s~~~~~~l~~~~~~~-----------------------~~v~~ip~g~~~~~~~~~~----------------------- 198 (372)
T cd04949 165 TEQQKQDLQKQFGNY-----------------------NPIYTIPVGSIDPLKLPAQ----------------------- 198 (372)
T ss_pred cHHHHHHHHHHhCCC-----------------------CceEEEcccccChhhcccc-----------------------
Confidence 998887765554321 1589999999987765421
Q ss_pred cchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHH
Q 001492 464 IPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLI 542 (1067)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~ 542 (1067)
......+.|+++||+.+.||++.+++|+..+. ...|++.| |+|.++.. ..+..++
T Consensus 199 -----------~~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~--~~~~~~~l~i~G~g~~~-----------~~~~~~~ 254 (372)
T cd04949 199 -----------FKQRKPHKIITVARLAPEKQLDQLIKAFAKVV--KQVPDATLDIYGYGDEE-----------EKLKELI 254 (372)
T ss_pred -----------hhhcCCCeEEEEEccCcccCHHHHHHHHHHHH--HhCCCcEEEEEEeCchH-----------HHHHHHH
Confidence 01234568999999999999999999999985 45677776 78887642 3445666
Q ss_pred HhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCC-CchhhhccCCceEEeC
Q 001492 543 DKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNG-GPVDIHRALNNGLLVD 621 (1067)
Q Consensus 543 ~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~G-g~~eiv~~~~~Gllv~ 621 (1067)
..+++.++|.|.|+ .+++..+|+.| |++|+||..||||++++|||+||+|||+++.| |+.+++.++.+|++++
T Consensus 255 ~~~~~~~~v~~~g~--~~~~~~~~~~a----d~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~ 328 (372)
T cd04949 255 EELGLEDYVFLKGY--TRDLDEVYQKA----QLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVP 328 (372)
T ss_pred HHcCCcceEEEcCC--CCCHHHHHhhh----hEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeC
Confidence 78888899999995 67899999999 99999999999999999999999999999987 8999999999999999
Q ss_pred CCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHH
Q 001492 622 PHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTY 665 (1067)
Q Consensus 622 p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~ 665 (1067)
+.|+++++++|.+++++++.++++++++++.+++|||+.++++|
T Consensus 329 ~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 329 KGDIEALAEAIIELLNDPKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred CCcHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 99999999999999999999999999999998899999998764
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=262.01 Aligned_cols=255 Identities=13% Similarity=0.098 Sum_probs=186.7
Q ss_pred EcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcc-cccCCEEEeCCHHHHH
Q 001492 311 GHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELS-LDAAELVITSTKQEID 389 (1067)
Q Consensus 311 ~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~-l~~Ad~Vi~~S~~~~~ 389 (1067)
.|+...+...+......|+|+|++.|+..+ +.+.+ +... .+.+|.|+++|+...+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~----------------------l~~~~--~~~~~~~~ad~ii~~S~~~~~ 107 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTDA----------------------ISHTA--LYFFRNQPVDEIVVPSQWSKN 107 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeech----------------------hhHHH--HHHHhhccCCEEEECCHHHHH
Confidence 555445555555556679999999998321 11111 3334 6889999999998877
Q ss_pred HHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhH
Q 001492 390 EQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWS 469 (1067)
Q Consensus 390 ~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (1067)
.+... |+. ...++.+||||+|.+.|.+...
T Consensus 108 ~l~~~------------------g~~----~~~~i~vIpNGVd~~~f~~~~~---------------------------- 137 (331)
T PHA01630 108 AFYTS------------------GLK----IPQPIYVIPHNLNPRMFEYKPK---------------------------- 137 (331)
T ss_pred HHHHc------------------CCC----CCCCEEEECCCCCHHHcCCCcc----------------------------
Confidence 65332 111 0137999999999988864331
Q ss_pred hhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCC
Q 001492 470 DVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLY 548 (1067)
Q Consensus 470 ~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~ 548 (1067)
...+..+++++||+.+.||++.|++|+..+. ...+++.+ |+|++.... ++ .++.
T Consensus 138 ------~~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~--~~~~~~~llivG~~~~~~-----------~l------~~~~ 192 (331)
T PHA01630 138 ------EKPHPCVLAILPHSWDRKGGDIVVKIFHELQ--NEGYDFYFLIKSSNMLDP-----------RL------FGLN 192 (331)
T ss_pred ------ccCCCEEEEEeccccccCCHHHHHHHHHHHH--hhCCCEEEEEEeCcccch-----------hh------cccc
Confidence 0123446667788999999999999999985 33456665 777543210 11 1222
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCC------
Q 001492 549 GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDP------ 622 (1067)
Q Consensus 549 ~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p------ 622 (1067)
+ +.+.++.+++..+|+.| |+||+||..|+||++++||||||+|||+|+.||..|++.++.||++|++
T Consensus 193 ~---~~~~v~~~~l~~~y~~a----Dv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~ 265 (331)
T PHA01630 193 G---VKTPLPDDDIYSLFAGC----DILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKL 265 (331)
T ss_pred c---eeccCCHHHHHHHHHhC----CEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccc
Confidence 2 34567889999999999 9999999999999999999999999999999999999999888777642
Q ss_pred -------------CCHHHHHHHHHHhhcC---HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 001492 623 -------------HDQQAIADALLKLVSE---KNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAA 671 (1067)
Q Consensus 623 -------------~d~~~la~aL~~ll~d---~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~ 671 (1067)
.|.+++++++.+++.+ ++.++.+.+++....++|||+.++++|+++|++
T Consensus 266 ~~~~~~~~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 266 WYTNPIHVGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred cccCCcccccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 3778899999999987 344555555555555899999999999999864
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.9e-27 Score=259.84 Aligned_cols=246 Identities=13% Similarity=0.098 Sum_probs=158.1
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||+++++.+++.++++|++++++| + .|+|||||++..+.++++++++. .++||+||+.|++..
T Consensus 5 li~~DlDGTLl~~~~~i~~~~~~ai~~~~~~G----~-~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~d~~ 75 (272)
T PRK10530 5 VIALDLDGTLLTPKKTILPESLEALARAREAG----Y-KVIIVTGRHHVAIHPFYQALALD----TPAICCNGTYLYDYQ 75 (272)
T ss_pred EEEEeCCCceECCCCccCHHHHHHHHHHHHCC----C-EEEEEcCCChHHHHHHHHhcCCC----CCEEEcCCcEEEecC
Confidence 66669999999988899999999999999997 7 89999999999999999998874 369999999999642
Q ss_pred CCcccCCcCCCChhhhh---------cccc------cc-ccchhHHHH--HhhhhcccCCCCCCCCCCC--cccc-cccC
Q 001492 859 TYTEEGGKLFPDPDYAS---------HIDY------RW-GCDGLKKTI--WKLMNTTEGGENSKNSSSP--IQED-QKSS 917 (1067)
Q Consensus 859 ~~~~~~~~~~~d~~~~~---------~i~~------~~-~~~~l~~~l--~~~~~~~~~~~~~~~~~~~--~~~~-~~~~ 917 (1067)
...... ....+..-.. .+.. .+ ......... ..+.......... ....+ +... ....
T Consensus 76 ~~~~l~-~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 153 (272)
T PRK10530 76 AKKVLE-ADPLPVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRP-TFTQVDSLAQAARQVN 153 (272)
T ss_pred CCEEEE-ecCCCHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhccc-ceEEcccHHHHHhhcC
Confidence 211000 0001110000 0000 00 000000000 0000000000000 00000 0000 0011
Q ss_pred CceEEEEEecCCCchHHHHHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCC
Q 001492 918 NAHCISYLIKDPSKARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDT 997 (1067)
Q Consensus 918 ~~~ki~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~ 997 (1067)
...++... ... ....+++.+.+... ..+.++.+... ++||+|.++|||.||+++++++|++++++++ |||+.|
T Consensus 154 ~~~~i~~~--~~~-~~~~~~~~~~~~~~-~~~~~~~s~~~-~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~-~GD~~N- 226 (272)
T PRK10530 154 AIWKFALT--HED-LPQLQHFAKHVEHE-LGLECEWSWHD-QVDIARKGNSKGKRLTQWVEAQGWSMKNVVA-FGDNFN- 226 (272)
T ss_pred CcEEEEEe--cCC-HHHHHHHHHHHhhh-cCceEEEecCc-eEEEecCCCChHHHHHHHHHHcCCCHHHeEE-eCCChh-
Confidence 12333222 111 11233444444332 22445555554 8999999999999999999999999999999 999999
Q ss_pred ChhhhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhhc
Q 001492 998 DYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVG 1061 (1067)
Q Consensus 998 D~~eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g 1061 (1067)
| ++||+.+|+|||||||. +++|..|+ ++|+++++|||+++|++|-
T Consensus 227 D-i~m~~~ag~~vamgna~---~~lk~~Ad---------------~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 227 D-ISMLEAAGLGVAMGNAD---DAVKARAD---------------LVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred h-HHHHHhcCceEEecCch---HHHHHhCC---------------EEEecCCCCcHHHHHHHHh
Confidence 9 99999999999999998 66677777 9999999999999999874
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=255.11 Aligned_cols=241 Identities=13% Similarity=0.072 Sum_probs=157.9
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||+++++.+.+.++++|++++++| + .|+|||||++..+.++++++++ ++++||+||+.|++..
T Consensus 1 li~~DlDGTll~~~~~~~~~~~~~i~~l~~~g----~-~~~~~TgR~~~~~~~~~~~~~~----~~~~I~~NGa~i~~~~ 71 (256)
T TIGR01486 1 WIFTDLDGTLLDPHGYDWGPAKEVLERLQELG----I-PVIPCTSKTAAEVEYLRKELGL----EDPFIVENGGAIYGPR 71 (256)
T ss_pred CEEEcCCCCCcCCCCcCchHHHHHHHHHHHCC----C-eEEEEcCCCHHHHHHHHHHcCC----CCcEEEcCCeEEEeCC
Confidence 35679999998886634446999999999997 7 8999999999999999999887 3689999999999864
Q ss_pred CCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcc----cCCCCCCC-------CCCCc-ccccccCCceEEEEEe
Q 001492 859 TYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTT----EGGENSKN-------SSSPI-QEDQKSSNAHCISYLI 926 (1067)
Q Consensus 859 ~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~----~~~~~~~~-------~~~~~-~~~~~~~~~~ki~~~~ 926 (1067)
+... .+..| .....|..+.+...+..+.... ........ ..... ..........++.+.
T Consensus 72 ~~~~------~~~~~--~~~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 142 (256)
T TIGR01486 72 GWFT------EPEYP--VIALGIPYEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILW- 142 (256)
T ss_pred Cccc------CCCeE--EEEcCCCHHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceec-
Confidence 2110 00001 1122223333333332221100 00000000 00000 000000112222222
Q ss_pred cCCCchHHHHHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCC--cccEEEEecCCCCCChhhhhc
Q 001492 927 KDPSKARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLN--VANMFVILGESGDTDYEELIS 1004 (1067)
Q Consensus 927 ~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~--~e~vva~fGDs~N~D~~eML~ 1004 (1067)
.. ..+..+.+.+...+ +.++.+ +. ++||+|+++|||.||++|++++|++ .+++++ |||+.| | ++||+
T Consensus 143 -~~---~~~~~~~~~~~~~~--~~~~~s-~~-~~ei~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a-~GD~~N-D-~~Ml~ 211 (256)
T TIGR01486 143 -SE---ERRERFTEALVELG--LEVTHG-NR-FYHVLGAGSDKGKAANALKQFYNQPGGAIKVVG-LGDSPN-D-LPLLE 211 (256)
T ss_pred -Ch---HHHHHHHHHHHHcC--CEEEeC-Cc-eEEEecCCCCHHHHHHHHHHHHhhcCCCceEEE-EcCCHh-h-HHHHH
Confidence 22 23455666665433 455554 33 9999999999999999999999999 999999 999999 9 99999
Q ss_pred CCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhh
Q 001492 1005 GAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQV 1060 (1067)
Q Consensus 1005 ~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~ 1060 (1067)
.+|+||||+||.+..+++|... +...|||+++++|||+++|+||
T Consensus 212 ~ag~~vam~Na~~~~~~lk~~~------------~a~~~vt~~~~~dGva~~l~~~ 255 (256)
T TIGR01486 212 VVDLAVVVPGPNGPNVSLKPGD------------PGSFLLTPAPGPEGWREALEHL 255 (256)
T ss_pred HCCEEEEeCCCCCCccccCccC------------CCcEEEcCCCCcHHHHHHHHHh
Confidence 9999999999985434444330 0123899999999999999986
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.2e-25 Score=253.91 Aligned_cols=344 Identities=18% Similarity=0.152 Sum_probs=238.6
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCc
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGI 245 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1067)
|||++++ ...||.++...+|+++|.++| |+|++++..... . .+
T Consensus 2 ~~i~i~~---------------~g~gG~~~~~~~la~~L~~~g--~ev~vv~~~~~~-~--------~~----------- 44 (357)
T PRK00726 2 KKILLAG---------------GGTGGHVFPALALAEELKKRG--WEVLYLGTARGM-E--------AR----------- 44 (357)
T ss_pred cEEEEEc---------------CcchHhhhHHHHHHHHHHhCC--CEEEEEECCCch-h--------hh-----------
Confidence 7888775 126799999999999999999 999999874210 0 00
Q ss_pred cccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHh
Q 001492 246 EVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSG 325 (1067)
Q Consensus 246 ~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~ 325 (1067)
.....|+.+++++..... ....+..+..+ ...+..+.++.+.+.+ .+|||||+|.+..+..+.++++
T Consensus 45 -~~~~~g~~~~~~~~~~~~----~~~~~~~l~~~-~~~~~~~~~~~~~ik~-------~~pDvv~~~~~~~~~~~~~~~~ 111 (357)
T PRK00726 45 -LVPKAGIEFHFIPSGGLR----RKGSLANLKAP-FKLLKGVLQARKILKR-------FKPDVVVGFGGYVSGPGGLAAR 111 (357)
T ss_pred -ccccCCCcEEEEeccCcC----CCChHHHHHHH-HHHHHHHHHHHHHHHh-------cCCCEEEECCCcchhHHHHHHH
Confidence 001147888888763321 11111111111 0112222233333332 5799999998766666777778
Q ss_pred cCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHH
Q 001492 326 ALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKV 405 (1067)
Q Consensus 326 ~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~ 405 (1067)
..++|+|++.|+..... .+++.+..+|.+++++++... . .
T Consensus 112 ~~~~p~v~~~~~~~~~~--------------------------~~r~~~~~~d~ii~~~~~~~~---~----~------- 151 (357)
T PRK00726 112 LLGIPLVIHEQNAVPGL--------------------------ANKLLARFAKKVATAFPGAFP---E----F------- 151 (357)
T ss_pred HcCCCEEEEcCCCCccH--------------------------HHHHHHHHhchheECchhhhh---c----c-------
Confidence 88999999888642210 123345678999998874321 1 1
Q ss_pred HHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEE
Q 001492 406 LRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILA 485 (1067)
Q Consensus 406 l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~ 485 (1067)
+..++.+||||+|.+.+.+... ..++...++.++|++
T Consensus 152 --------------~~~~i~vi~n~v~~~~~~~~~~-----------------------------~~~~~~~~~~~~i~~ 188 (357)
T PRK00726 152 --------------FKPKAVVTGNPVREEILALAAP-----------------------------PARLAGREGKPTLLV 188 (357)
T ss_pred --------------CCCCEEEECCCCChHhhcccch-----------------------------hhhccCCCCCeEEEE
Confidence 1138999999999876543210 011222356788999
Q ss_pred EeCCCCCCCHHHHH-HHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHH
Q 001492 486 LSRPDPKKNITTLL-KAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPE 564 (1067)
Q Consensus 486 vgRld~~Kgi~~ll-~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ 564 (1067)
+|+..+.|++..++ +|+.++.. .+...+++|+++. +.+....+ +++. |.|.|++ ++++.
T Consensus 189 ~gg~~~~~~~~~~l~~a~~~~~~---~~~~~~~~G~g~~------------~~~~~~~~-~~~~--v~~~g~~--~~~~~ 248 (357)
T PRK00726 189 VGGSQGARVLNEAVPEALALLPE---ALQVIHQTGKGDL------------EEVRAAYA-AGIN--AEVVPFI--DDMAA 248 (357)
T ss_pred ECCcHhHHHHHHHHHHHHHHhhh---CcEEEEEcCCCcH------------HHHHHHhh-cCCc--EEEeehH--hhHHH
Confidence 99998888876665 99988842 2433347788752 23334444 5653 9999996 79999
Q ss_pred HHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC--------chhhhccCCceEEeCCCC--HHHHHHHHHH
Q 001492 565 IYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG--------PVDIHRALNNGLLVDPHD--QQAIADALLK 634 (1067)
Q Consensus 565 ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg--------~~eiv~~~~~Gllv~p~d--~~~la~aL~~ 634 (1067)
+|..| |++|.++ .+.+++|||+||+|||++..++ ..+.+.+..+|+++++.| +++++++|.+
T Consensus 249 ~~~~~----d~~i~~~----g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ 320 (357)
T PRK00726 249 AYAAA----DLVICRA----GASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLE 320 (357)
T ss_pred HHHhC----CEEEECC----CHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHH
Confidence 99999 9999875 2689999999999999987643 235677778999999888 9999999999
Q ss_pred hhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 001492 635 LVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 635 ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~ 670 (1067)
++++++++++|++++++..+.++...+++.+++.++
T Consensus 321 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 321 LLSDPERLEAMAEAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred HHcCHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence 999999999999999998889999999999888764
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-24 Score=243.66 Aligned_cols=219 Identities=15% Similarity=0.206 Sum_probs=162.7
Q ss_pred cccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCcccccccccc
Q 001492 374 LDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLI 453 (1067)
Q Consensus 374 l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~ 453 (1067)
+.+.+.+|++|+...+.+.+. |+.. .+ +||+|+|++.|.+... ..
T Consensus 90 m~~~~~vIavS~~t~~~L~~~------------------G~~~------~i-~I~~GVD~~~f~p~~~---~~------- 134 (335)
T PHA01633 90 LLQDVKFIPNSKFSAENLQEV------------------GLQV------DL-PVFHGINFKIVENAEK---LV------- 134 (335)
T ss_pred HhcCCEEEeCCHHHHHHHHHh------------------CCCC------ce-eeeCCCChhhcCccch---hh-------
Confidence 344668999999887765332 2221 33 5789999998876431 00
Q ss_pred CCCCCCCCCCcchhhHhhhhhcc-CCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC----cEEE-EEecCCChhhh
Q 001492 454 GGTDGSSPKAIPAIWSDVMRFLT-NPHKPMILALSRPDPKKNITTLLKAFGECRPLRELA----NLTL-IMGNRDDIEEM 527 (1067)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~----~l~l-IvG~~~~~~~l 527 (1067)
+ ..+.++.. .++.++|+++||+.+.||++.+++|+..+.+ ..+ ++.+ ++|..
T Consensus 135 -----------~---~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~--~~p~~~~~i~l~ivG~~------ 192 (335)
T PHA01633 135 -----------P---QLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNT--KYPDIAKKIHFFVISHK------ 192 (335)
T ss_pred -----------H---HHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHH--hCCCccccEEEEEEcHH------
Confidence 0 01112211 2467789999999999999999999999853 333 3455 44421
Q ss_pred hccchHHHHHHHHHHHhcCCCCcEEeC---CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCC
Q 001492 528 SSGNASVLITVLKLIDKYDLYGQVAYP---KHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKN 604 (1067)
Q Consensus 528 ~~~~~~~~~~i~~l~~~~~l~~~V~~~---g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~ 604 (1067)
...++++.++|.|. |+.+.+++.++|+.| |+||+||.+||||++++||||||+|||+++.
T Consensus 193 -------------~~~~l~l~~~V~f~g~~G~~~~~dl~~~y~~a----DifV~PS~~EgfGlvlLEAMA~G~PVVas~~ 255 (335)
T PHA01633 193 -------------QFTQLEVPANVHFVAEFGHNSREYIFAFYGAM----DFTIVPSGTEGFGMPVLESMAMGTPVIHQLM 255 (335)
T ss_pred -------------HHHHcCCCCcEEEEecCCCCCHHHHHHHHHhC----CEEEECCccccCCHHHHHHHHcCCCEEEccC
Confidence 12445677889998 555778999999999 9999999999999999999999999999999
Q ss_pred CCchhhhcc------------------CCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 001492 605 GGPVDIHRA------------------LNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYL 666 (1067)
Q Consensus 605 Gg~~eiv~~------------------~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l 666 (1067)
||..|++.. ...|+++++.|+++++++|.+++...+ +..+++++++.++.|+|+.++++|+
T Consensus 256 ~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~-~~~~~~~~~~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 256 PPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD-REERSMKLKELAKKYDIRNLYTRFL 334 (335)
T ss_pred CCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC-hhhhhHHHHHHHHhcCHHHHHHHhh
Confidence 998886441 224778889999999999999966432 3334778888889999999999986
Q ss_pred H
Q 001492 667 T 667 (1067)
Q Consensus 667 ~ 667 (1067)
+
T Consensus 335 ~ 335 (335)
T PHA01633 335 E 335 (335)
T ss_pred C
Confidence 3
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-26 Score=252.69 Aligned_cols=237 Identities=16% Similarity=0.148 Sum_probs=157.9
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||+++++.+++.++++|++++++| + .|+|||||++..+.++++.+++. .++||+||+.|++..
T Consensus 1 li~~DlDGTLl~~~~~i~~~~~~~i~~l~~~G----~-~~~iaTGR~~~~~~~~~~~~~~~----~~~I~~NGa~i~~~~ 71 (256)
T TIGR00099 1 LIFIDLDGTLLNDDHTISPSTKEALAKLREKG----I-KVVLATGRPYKEVKNILKELGLD----TPFITANGAAVIDDQ 71 (256)
T ss_pred CEEEeCCCCCCCCCCccCHHHHHHHHHHHHCC----C-eEEEEeCCCHHHHHHHHHHcCCC----CCEEEcCCcEEECCC
Confidence 46779999999988889999999999999997 7 89999999999999999998763 379999999999763
Q ss_pred CCcccCCcCCCChhhhhcc---------ccc-cccc------hhHHHHHhhhhcccCCCCCCCCCCCcc-cccccCCceE
Q 001492 859 TYTEEGGKLFPDPDYASHI---------DYR-WGCD------GLKKTIWKLMNTTEGGENSKNSSSPIQ-EDQKSSNAHC 921 (1067)
Q Consensus 859 ~~~~~~~~~~~d~~~~~~i---------~~~-~~~~------~l~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~k 921 (1067)
+... . ....+......+ ... +..+ .....+........... ..+.. .........+
T Consensus 72 ~~~i-~-~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 144 (256)
T TIGR00099 72 GEIL-Y-KKPLDLDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPK-----LEVVDIQYLPDDILKI 144 (256)
T ss_pred CCEE-e-ecCCCHHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCc-----ceeccchhhhcccceE
Confidence 2111 0 000111000000 000 0000 00000000000000000 00000 0000111222
Q ss_pred EEEEecCCCchHHHHHHHHHHHh--cCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCh
Q 001492 922 ISYLIKDPSKARRIDDLRQKLRM--RGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDY 999 (1067)
Q Consensus 922 i~~~~~~~~~~~~~~el~~~L~~--~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~ 999 (1067)
+.+. .+. ..++++.+.+.. ....+.++.+.+. ++||+|.++|||.||+++++++|++++++++ |||+.| |
T Consensus 145 ~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~s~~~-~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~-~GD~~n-D- 216 (256)
T TIGR00099 145 LLLF-LDP---EDLDLLIEALNKLELEENVSVVSSGPY-SIEITAKGVSKGSALQSLAEALGISLEDVIA-FGDGMN-D- 216 (256)
T ss_pred EEEE-CCH---HHHHHHHHHhhhhhhcCCEEEEEecCc-eEEecCCCCChHHHHHHHHHHcCCCHHHEEE-eCCcHH-h-
Confidence 3232 222 234455555542 2345777777775 9999999999999999999999999999999 999999 9
Q ss_pred hhhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHH
Q 001492 1000 EELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANAL 1057 (1067)
Q Consensus 1000 ~eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al 1057 (1067)
++||+.+|++|||+||. +++|..|+ +++.++++|||+++|
T Consensus 217 ~~m~~~~~~~~a~~na~---~~~k~~a~---------------~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 217 IEMLEAAGYGVAMGNAD---EELKALAD---------------YVTDSNNEDGVALAL 256 (256)
T ss_pred HHHHHhCCceeEecCch---HHHHHhCC---------------EEecCCCCcchhhhC
Confidence 99999999999999998 56777777 999999999999875
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-25 Score=263.01 Aligned_cols=360 Identities=13% Similarity=0.121 Sum_probs=250.1
Q ss_pred CeEEEeccCCCCc-----cCcccccccchhHHHH----------HHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCch
Q 001492 252 GAYIIRIPFGPRD-----KYLRKELLWPYIQEFV----------DGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADA 316 (1067)
Q Consensus 252 gv~i~ri~~~~~~-----~~l~k~~l~~~l~~f~----------~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a 316 (1067)
+..+.+++..+.. ....+..+||.+..+. ......-..++.++.+... .-|+|-.|+.-.
T Consensus 69 ~~~~~~v~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~-----~~d~vWVhDYhL 143 (487)
T TIGR02398 69 KLTAARIPLSKEQVDIFYHITSKEAFWPILHTFPERFQFREDDWQVFLKVNRAFAEAACLEAA-----EGATVWVHDYNL 143 (487)
T ss_pred ceeEEEEeCCHHHHHHHHhhhhhccccccccCCccccCcCHHHHHHHHHHHHHHHHHHHHhcC-----CCCEEEEecchh
Confidence 4555666654321 1234556777653221 2222233345555555443 247899998755
Q ss_pred hHHHHHHHhc-CCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhc
Q 001492 317 GDSAALLSGA-LNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLY 395 (1067)
Q Consensus 317 ~~~a~~l~~~-~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y 395 (1067)
..++..+.++ ...++-|..|..++..- -+ .. ++. .-.+ -..+-.||.|-..|....+.+....
T Consensus 144 ~llp~~LR~~~~~~~IgfFlHiPFPs~e-if-r~--LP~-----r~~l-------l~glL~aDliGFqt~~y~~~Fl~~~ 207 (487)
T TIGR02398 144 WLVPGYIRQLRPDLKIAFFHHTPFPSAD-VF-NI--LPW-----REQI-------IGSLLCCDYIGFHIPRYVENFVDAA 207 (487)
T ss_pred hHHHHHHHHhCCCCeEEEEeeCCCCChH-HH-hh--CCc-----hHHH-------HHHHhcCCeEEeCCHHHHHHHHHHH
Confidence 5666666554 35788999998766441 11 00 010 1112 2246789999999999888776532
Q ss_pred CCCchHHHHHHHHHHh----------------------cCcccCCCCCCCEEEeCCCCCCCCccCCCCCCcccccccccc
Q 001492 396 DGFDVKLEKVLRARAR----------------------RGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLI 453 (1067)
Q Consensus 396 ~~~~~~l~~~l~~~~~----------------------~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~ 453 (1067)
.+.|+.+.. .+|...|+.. ++.++|+|||++.|.+....+++....+
T Consensus 208 -------~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v-~v~~~PiGID~~~f~~~~~~~~~~~~~~--- 276 (487)
T TIGR02398 208 -------RGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVV-KLGAHPVGTDPERIRSALAAASIREMME--- 276 (487)
T ss_pred -------HHHhCCccccccccccccccccccccccccccceeECCEEE-EEEEEECEecHHHHHHHhcCchHHHHHH---
Confidence 222322211 1244445555 7999999999999976543222222211
Q ss_pred CCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc----EEE-EEecC-----CC
Q 001492 454 GGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELAN----LTL-IMGNR-----DD 523 (1067)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~l-IvG~~-----~~ 523 (1067)
..+.++ .++++|++++|+++.|||..+++||+++ |..+|+ ++| ++|.. +.
T Consensus 277 ---------------~lr~~~---~~~kiIl~VDRLDy~KGI~~kl~Afe~~--L~~~Pe~~gkv~Lvqi~~psr~~v~~ 336 (487)
T TIGR02398 277 ---------------RIRSEL---AGVKLILSAERVDYTKGILEKLNAYERL--LERRPELLGKVTLVTACVPAASGMTI 336 (487)
T ss_pred ---------------HHHHHc---CCceEEEEecccccccCHHHHHHHHHHH--HHhCccccCceEEEEEeCCCcccchH
Confidence 112222 3688999999999999999999999999 466775 343 44443 45
Q ss_pred hhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCC----CE
Q 001492 524 IEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGL----PM 599 (1067)
Q Consensus 524 ~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~----PV 599 (1067)
+++++.+..+...+||....+.++.+.++|.+.++.+++.++|+.| ||+++||++||||||.+||+||+. |+
T Consensus 337 y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~A----DV~lvT~lrDGmNLVa~Eyva~~~~~~GvL 412 (487)
T TIGR02398 337 YDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMA----DVMWITPLRDGLNLVAKEYVAAQGLLDGVL 412 (487)
T ss_pred HHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhC----CEEEECccccccCcchhhHHhhhcCCCCCE
Confidence 6778888888888899998989999999999999999999999999 999999999999999999999976 77
Q ss_pred EEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHH-HHHHHHHHcCCHHHHHHHHHHHHH
Q 001492 600 VATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECR-KNGWKNIHLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 600 Vat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~-~~~~~~~~~fsw~~~a~~~l~~~~ 670 (1067)
|.|..+|..+.+ ..+++|||+|++++|++|.++|++|...++.+ +..++.+..++...|++.|+..+.
T Consensus 413 ILSefaGaa~~l---~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l~ 481 (487)
T TIGR02398 413 VLSEFAGAAVEL---KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLAAVS 481 (487)
T ss_pred EEeccccchhhc---CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 777766655443 46999999999999999999999876544444 444555689999999999997664
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=240.40 Aligned_cols=213 Identities=12% Similarity=0.171 Sum_probs=152.0
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||+++++.+++.++++|++++++| + .|+|||||++..+..+++.++++ .++||+||+.|++..
T Consensus 3 ~v~~DlDGTLl~~~~~i~~~~~~~i~~l~~~g----~-~~~~~TGR~~~~~~~~~~~l~~~----~~~i~~NGa~i~~~~ 73 (215)
T TIGR01487 3 LVAIDIDGTLTEPNRMISERAIEAIRKAEKKG----I-PVSLVTGNTVPFARALAVLIGTS----GPVVAENGGVIFYNK 73 (215)
T ss_pred EEEEecCCCcCCCCcccCHHHHHHHHHHHHCC----C-EEEEEcCCcchhHHHHHHHhCCC----CcEEEccCcEEEeCC
Confidence 55669999999988899999999999999997 7 89999999999999999998763 379999999999863
Q ss_pred CCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCCchHHHHHH
Q 001492 859 TYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDL 938 (1067)
Q Consensus 859 ~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~el 938 (1067)
.... +..... .|. .... .. ..+..... .. ........+... .. ..+.+
T Consensus 74 ~~~~----------~~~~~~-~~~---~~~~-~~--~~~~~~~~---------~~--~~~~~~~~~~~~-~~---~~~~~ 121 (215)
T TIGR01487 74 EDIF----------LANMEE-EWF---LDEE-KK--KRFPRDRL---------SN--EYPRASLVIMRE-GK---DVDEV 121 (215)
T ss_pred CcEE----------Eecccc-hhh---HHHh-hh--hhhhhhhc---------cc--ccceeEEEEecC-Cc---cHHHH
Confidence 1110 000000 000 0000 00 00000000 00 000111222221 22 23455
Q ss_pred HHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCccc
Q 001492 939 RQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEK 1018 (1067)
Q Consensus 939 ~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~ 1018 (1067)
.+.+...+ +.+..+ + .++||+|.+++||.||+++++++|++++++++ |||+.| | ++||+.+|+||||+||.
T Consensus 122 ~~~l~~~~--~~~~~~-~-~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~-iGDs~N-D-~~ml~~ag~~vam~na~-- 192 (215)
T TIGR01487 122 REIIKERG--LNLVDS-G-FAIHIMKKGVDKGVGVEKLKELLGIKPEEVAA-IGDSEN-D-IDLFRVVGFKVAVANAD-- 192 (215)
T ss_pred HHHHHhCC--eEEEec-C-ceEEEecCCCChHHHHHHHHHHhCCCHHHEEE-ECCCHH-H-HHHHHhCCCeEEcCCcc--
Confidence 55665433 444443 4 38999999999999999999999999999999 999999 9 99999999999999998
Q ss_pred chhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHH
Q 001492 1019 GSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANAL 1057 (1067)
Q Consensus 1019 ~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al 1057 (1067)
+++|.+|+ |+|.+..++||+++|
T Consensus 193 -~~~k~~A~---------------~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 193 -DQLKEIAD---------------YVTSNPYGEGVVEVL 215 (215)
T ss_pred -HHHHHhCC---------------EEcCCCCCchhhhhC
Confidence 77888888 999999999999875
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.5e-24 Score=244.99 Aligned_cols=331 Identities=19% Similarity=0.185 Sum_probs=226.5
Q ss_pred CCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCcc
Q 001492 189 DTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLR 268 (1067)
Q Consensus 189 ~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~ 268 (1067)
.+||..+++..|+++|.++| |+|+++|..... . .+ .....+++++++++... .
T Consensus 8 ~~gG~~~~~~~la~~l~~~G--~ev~v~~~~~~~-~--------~~------------~~~~~~~~~~~~~~~~~----~ 60 (350)
T cd03785 8 GTGGHIFPALALAEELRERG--AEVLFLGTKRGL-E--------AR------------LVPKAGIPLHTIPVGGL----R 60 (350)
T ss_pred CchhhhhHHHHHHHHHHhCC--CEEEEEECCCcc-h--------hh------------cccccCCceEEEEecCc----C
Confidence 37899999999999999999 999999884210 0 00 00113678888876432 1
Q ss_pred cccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHh
Q 001492 269 KELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLK 348 (1067)
Q Consensus 269 k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~ 348 (1067)
+...+..+..+.. ++..+.++.+.+.+ .+||+||+|...++..+.++++..++|+|++.|+....
T Consensus 61 ~~~~~~~~~~~~~-~~~~~~~~~~~i~~-------~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~~------- 125 (350)
T cd03785 61 RKGSLKKLKAPFK-LLKGVLQARKILKK-------FKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVPG------- 125 (350)
T ss_pred CCChHHHHHHHHH-HHHHHHHHHHHHHh-------cCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCcc-------
Confidence 1111221211111 11222222222222 57999999987666667777888899999877754211
Q ss_pred hCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeC
Q 001492 349 QGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIP 428 (1067)
Q Consensus 349 ~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIP 428 (1067)
+. ++..++.+|.|++.|+...+. + .+ .++.+||
T Consensus 126 --------------~~-----~~~~~~~~~~vi~~s~~~~~~----~---~~---------------------~~~~~i~ 158 (350)
T cd03785 126 --------------LA-----NRLLARFADRVALSFPETAKY----F---PK---------------------DKAVVTG 158 (350)
T ss_pred --------------HH-----HHHHHHhhCEEEEcchhhhhc----C---CC---------------------CcEEEEC
Confidence 01 123456789999999876543 1 11 2899999
Q ss_pred CCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHH-HHHHHHhccc
Q 001492 429 PGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITT-LLKAFGECRP 507 (1067)
Q Consensus 429 nGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~ 507 (1067)
||+|.+.+.+... ..++..++++++|+++|+....|+... +++|+..+.
T Consensus 159 n~v~~~~~~~~~~-----------------------------~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~- 208 (350)
T cd03785 159 NPVREEILALDRE-----------------------------RARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELL- 208 (350)
T ss_pred CCCchHHhhhhhh-----------------------------HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhh-
Confidence 9999876653210 122234567788888888777777765 458888774
Q ss_pred ccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCH
Q 001492 508 LRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGL 587 (1067)
Q Consensus 508 l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~Egfgl 587 (1067)
.....+.+++|++. . +++.+.+..+ .++|.|.|+. +++.++|+.| |++|.++ + ++
T Consensus 209 -~~~~~~~~i~G~g~-~-----------~~l~~~~~~~--~~~v~~~g~~--~~~~~~l~~a----d~~v~~s---g-~~ 263 (350)
T cd03785 209 -RKRLQVIHQTGKGD-L-----------EEVKKAYEEL--GVNYEVFPFI--DDMAAAYAAA----DLVISRA---G-AS 263 (350)
T ss_pred -ccCeEEEEEcCCcc-H-----------HHHHHHHhcc--CCCeEEeehh--hhHHHHHHhc----CEEEECC---C-Hh
Confidence 22222334667762 2 3344455554 4689999996 7999999999 9999875 2 68
Q ss_pred HHHHHHHcCCCEEEcCCCC--------chhhhccCCceEEeCCC--CHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCC
Q 001492 588 TLIEAAAHGLPMVATKNGG--------PVDIHRALNNGLLVDPH--DQQAIADALLKLVSEKNLWVECRKNGWKNIHLFS 657 (1067)
Q Consensus 588 tllEAmA~G~PVVat~~Gg--------~~eiv~~~~~Gllv~p~--d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fs 657 (1067)
+++|||++|+|||++..++ ..+.+.+..+|+++++. |+++++++|.+++++++.++++++++++.+..+.
T Consensus 264 t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~ 343 (350)
T cd03785 264 TVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDPERLKAMAEAARSLARPDA 343 (350)
T ss_pred HHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH
Confidence 9999999999999987654 24666677899999987 8999999999999999999999999998887777
Q ss_pred HHHHHH
Q 001492 658 WPEHCR 663 (1067)
Q Consensus 658 w~~~a~ 663 (1067)
-+++++
T Consensus 344 ~~~i~~ 349 (350)
T cd03785 344 AERIAD 349 (350)
T ss_pred HHHHHh
Confidence 777664
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.9e-24 Score=243.04 Aligned_cols=327 Identities=18% Similarity=0.179 Sum_probs=216.4
Q ss_pred CChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCccc
Q 001492 190 TGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRK 269 (1067)
Q Consensus 190 ~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k 269 (1067)
+||.......|+++|.++| |+|+++|+... . ..+ .....|+++++++..+.. ....
T Consensus 10 ~~g~~~~~~~La~~L~~~g--~eV~vv~~~~~---~------~~~------------~~~~~g~~~~~i~~~~~~-~~~~ 65 (348)
T TIGR01133 10 TGGHIFPALAVAEELIKRG--VEVLWLGTKRG---L------EKR------------LVPKAGIEFYFIPVGGLR-RKGS 65 (348)
T ss_pred cHHHHhHHHHHHHHHHhCC--CEEEEEeCCCc---c------hhc------------ccccCCCceEEEeccCcC-CCCh
Confidence 4566665579999999999 99999986211 0 000 001247888888764421 1111
Q ss_pred ccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhh
Q 001492 270 ELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQ 349 (1067)
Q Consensus 270 ~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~ 349 (1067)
...+.....+ +..+.++.+.+.+ .+||+||+|.......+.++++..++|+|++.|.....
T Consensus 66 ~~~l~~~~~~----~~~~~~l~~~i~~-------~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~~-------- 126 (348)
T TIGR01133 66 FRLIKTPLKL----LKAVFQARRILKK-------FKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVPG-------- 126 (348)
T ss_pred HHHHHHHHHH----HHHHHHHHHHHHh-------cCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCcc--------
Confidence 1111111111 1222222223332 57999999987666666777788899998655432110
Q ss_pred CCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCC
Q 001492 350 GRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPP 429 (1067)
Q Consensus 350 g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPn 429 (1067)
. .+++..+.+|.+++.++...+.+ +..+|||
T Consensus 127 -------------~-----~~~~~~~~~d~ii~~~~~~~~~~-------------------------------~~~~i~n 157 (348)
T TIGR01133 127 -------------L-----TNKLLSRFAKKVLISFPGAKDHF-------------------------------EAVLVGN 157 (348)
T ss_pred -------------H-----HHHHHHHHhCeeEECchhHhhcC-------------------------------CceEEcC
Confidence 0 02334678999999998654321 3479999
Q ss_pred CCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccc
Q 001492 430 GMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITT-LLKAFGECRPL 508 (1067)
Q Consensus 430 GiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~l 508 (1067)
|+|...+.+... ...+..+++.++|+++|+....|++.. +++|+..+..
T Consensus 158 ~v~~~~~~~~~~-----------------------------~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~- 207 (348)
T TIGR01133 158 PVRQEIRSLPVP-----------------------------RERFGLREGKPTILVLGGSQGAKILNELVPKALAKLAE- 207 (348)
T ss_pred CcCHHHhcccch-----------------------------hhhcCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhh-
Confidence 998765532210 012233457788999998888888655 5588887742
Q ss_pred cCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHH
Q 001492 509 RELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLT 588 (1067)
Q Consensus 509 ~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~Egfglt 588 (1067)
....+.+++|+++ ...+.+.+.++++...|.|. ..+++++|..| |++|.++ | +++
T Consensus 208 -~~~~~~~~~g~~~------------~~~l~~~~~~~~l~~~v~~~----~~~~~~~l~~a----d~~v~~~---g-~~~ 262 (348)
T TIGR01133 208 -KGIQIVHQTGKND------------LEKVKNVYQELGIEAIVTFI----DENMAAAYAAA----DLVISRA---G-AST 262 (348)
T ss_pred -cCcEEEEECCcch------------HHHHHHHHhhCCceEEecCc----ccCHHHHHHhC----CEEEECC---C-hhH
Confidence 2233434455543 23455667777776556665 23899999999 9999864 2 789
Q ss_pred HHHHHHcCCCEEEcCCCC-------chhhhccCCceEEeCCCC--HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHH
Q 001492 589 LIEAAAHGLPMVATKNGG-------PVDIHRALNNGLLVDPHD--QQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWP 659 (1067)
Q Consensus 589 llEAmA~G~PVVat~~Gg-------~~eiv~~~~~Gllv~p~d--~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~ 659 (1067)
++|||++|+|||++..++ ..+++.++.+|+++++.| +++++++|.++++|++.+++|++++++.+..+.-+
T Consensus 263 l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~ 342 (348)
T TIGR01133 263 VAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPANLEAMAEAARKLAKPDAAK 342 (348)
T ss_pred HHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcCCccHHH
Confidence 999999999999998754 235788889999999876 99999999999999999999999998877666655
Q ss_pred HHHH
Q 001492 660 EHCR 663 (1067)
Q Consensus 660 ~~a~ 663 (1067)
++++
T Consensus 343 ~i~~ 346 (348)
T TIGR01133 343 RIAE 346 (348)
T ss_pred HHHh
Confidence 5553
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.8e-24 Score=235.41 Aligned_cols=249 Identities=13% Similarity=0.121 Sum_probs=154.0
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||+++++.+++.++++|++|+++| + .|+|||||++..+..+++.+++. +++||.||+.|++..
T Consensus 6 li~~DlDGTLl~~~~~~~~~~~~ai~~l~~~G----i-~~~iaTgR~~~~~~~~~~~l~l~----~~~i~~nGa~i~~~~ 76 (273)
T PRK00192 6 LVFTDLDGTLLDHHTYSYEPAKPALKALKEKG----I-PVIPCTSKTAAEVEVLRKELGLE----DPFIVENGAAIYIPK 76 (273)
T ss_pred EEEEcCcccCcCCCCcCcHHHHHHHHHHHHCC----C-EEEEEcCCCHHHHHHHHHHcCCC----CCEEEEcCcEEEecc
Confidence 55669999999877788899999999999997 7 89999999999999999998874 479999999998753
Q ss_pred CCccc--CCcCCCChhhhhccccccccchhHHHHHhhhhcc---cCCCCCCC------CCCC-cc--cccccCCceEEEE
Q 001492 859 TYTEE--GGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTT---EGGENSKN------SSSP-IQ--EDQKSSNAHCISY 924 (1067)
Q Consensus 859 ~~~~~--~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~---~~~~~~~~------~~~~-~~--~~~~~~~~~ki~~ 924 (1067)
..... +.....+..|. .......+.+.+.+..+.... ........ .... .. .........++.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (273)
T PRK00192 77 NYFPFQPDGERLKGDYWV--IELGPPYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFL 154 (273)
T ss_pred cccccCCccccccCCceE--EEcCCCHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCcee
Confidence 21000 00000000000 000111122222221111100 00000000 0000 00 0000001111111
Q ss_pred EecCCCchHHHHHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCc-ccEEEEecCCCCCChhhhh
Q 001492 925 LIKDPSKARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNV-ANMFVILGESGDTDYEELI 1003 (1067)
Q Consensus 925 ~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~-e~vva~fGDs~N~D~~eML 1003 (1067)
.... ....+.+.+.+...+ +.++.+ + .++||+|.+ |||.|+++|++++|+++ +++++ |||+.| | ++||
T Consensus 155 ~~~~---~~~~~~~~~~l~~~~--~~~~~~-~-~~~ei~~~~-~Kg~al~~l~~~~~i~~~~~v~~-~GDs~N-D-i~m~ 223 (273)
T PRK00192 155 WNGS---EAAKERFEEALKRLG--LKVTRG-G-RFLHLLGGG-DKGKAVRWLKELYRRQDGVETIA-LGDSPN-D-LPML 223 (273)
T ss_pred ecCc---hHHHHHHHHHHHHcC--CEEEEC-C-eEEEEeCCC-CHHHHHHHHHHHHhccCCceEEE-EcCChh-h-HHHH
Confidence 1211 123456666665433 444443 4 599999999 99999999999999999 99999 999999 9 9999
Q ss_pred cCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhh
Q 001492 1004 SGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQV 1060 (1067)
Q Consensus 1004 ~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~ 1060 (1067)
+.+|++|||+||.+..++.+..+. -...++|.+...|||+.+|+++
T Consensus 224 ~~ag~~vam~NA~~~~k~~~~~~a-----------~~~v~~~~~~~~~Gv~~~l~~~ 269 (273)
T PRK00192 224 EAADIAVVVPGPDGPNPPLLPGIA-----------DGEFILASAPGPEGWAEAINKL 269 (273)
T ss_pred HhCCeeEEeCCCCCCCcccCcccc-----------CCceEEecCCCcHHHHHHHHHH
Confidence 999999999999954432111110 0234555888999999999984
|
|
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-23 Score=242.67 Aligned_cols=363 Identities=14% Similarity=0.126 Sum_probs=254.7
Q ss_pred CeEEEeccCCCCc-----cCcccccccchhHHHH----------HHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCch
Q 001492 252 GAYIIRIPFGPRD-----KYLRKELLWPYIQEFV----------DGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADA 316 (1067)
Q Consensus 252 gv~i~ri~~~~~~-----~~l~k~~l~~~l~~f~----------~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a 316 (1067)
++...+++..+.. ....+..+||.+..+. .........++.++.+.... -|+|-.|+.-.
T Consensus 60 ~~~~~~v~L~~~~~~~yY~gfsn~~LWPlfHy~~~~~~~~~~~w~~Y~~VN~~FA~~v~~~~~~-----~D~VWVHDYhL 134 (474)
T PRK10117 60 NITWASFNLSEQDYDEYYNQFSNAVLWPAFHYRLDLVQFQRPAWEGYLRVNALLADKLLPLLKD-----DDIIWIHDYHL 134 (474)
T ss_pred CceEEEecCCHHHHHHHHhhhhhcchhhhhCCCCCccCcCHHHHHHHHHHHHHHHHHHHHhcCC-----CCEEEEeccHh
Confidence 4556666554321 1233556777654321 22223334455555554432 48999998755
Q ss_pred hHHHHHHHhc-CCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhc
Q 001492 317 GDSAALLSGA-LNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLY 395 (1067)
Q Consensus 317 ~~~a~~l~~~-~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y 395 (1067)
..++..+.+. ...++-|..|..++..- ++.. ++. .-.+ -..+-.||.|-..|....+.+....
T Consensus 135 ~llp~~LR~~~~~~~IgFFlHiPFPs~e--ifr~--LP~-----r~ei-------l~glL~aDlIGFqt~~y~rnFl~~~ 198 (474)
T PRK10117 135 LPFASELRKRGVNNRIGFFLHIPFPTPE--IFNA--LPP-----HDEL-------LEQLCDYDLLGFQTENDRLAFLDCL 198 (474)
T ss_pred hHHHHHHHHhCCCCcEEEEEeCCCCChH--HHhh--CCC-----hHHH-------HHHHHhCccceeCCHHHHHHHHHHH
Confidence 5555565543 45789999998766441 1100 010 1112 2246789999999999888775532
Q ss_pred CCCchHHHHHHHHHHhc--CcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhh
Q 001492 396 DGFDVKLEKVLRARARR--GVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMR 473 (1067)
Q Consensus 396 ~~~~~~l~~~l~~~~~~--Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (1067)
.+.|+.+... .+...|+.. ++.++|.|||++.|......+ ... ....++.
T Consensus 199 -------~~~lg~~~~~~~~v~~~gr~v-~v~~~PigID~~~~~~~a~~~-~~~-------------------~~~~lr~ 250 (474)
T PRK10117 199 -------SNLTRVTTRSGKSHTAWGKAF-RTEVYPIGIEPDEIAKQAAGP-LPP-------------------KLAQLKA 250 (474)
T ss_pred -------HHHcCCcccCCCeEEECCeEE-EEEEEECeEcHHHHHHHhhch-HHH-------------------HHHHHHH
Confidence 2223222211 223334444 799999999999987544211 111 1112222
Q ss_pred hccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc----EEE---EEecC---CChhhhhccchHHHHHHHHHHH
Q 001492 474 FLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELAN----LTL---IMGNR---DDIEEMSSGNASVLITVLKLID 543 (1067)
Q Consensus 474 ~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~l---IvG~~---~~~~~l~~~~~~~~~~i~~l~~ 543 (1067)
. ..++++|+.++|+|+.|||...++||+.+ |..+|. +++ .+.++ ++|++++.+..+.+++||..+.
T Consensus 251 ~--~~~~~lilgVDRLDytKGi~~rl~Afe~f--L~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg 326 (474)
T PRK10117 251 E--LKNVQNIFSVERLDYSKGLPERFLAYEAL--LEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYG 326 (474)
T ss_pred H--cCCCeEEEEecccccccCHHHHHHHHHHH--HHhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccC
Confidence 2 14678999999999999999999999998 456664 222 33444 5677888888999999999999
Q ss_pred hcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc------CCCEEEcCCCCchhhhccCCce
Q 001492 544 KYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAH------GLPMVATKNGGPVDIHRALNNG 617 (1067)
Q Consensus 544 ~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~------G~PVVat~~Gg~~eiv~~~~~G 617 (1067)
+.+|.+..++...++++++.++|+.| ||++++|+.+||+|+.+||+|| |+.|+|..+|+..++ ..+
T Consensus 327 ~~~w~Pv~y~~~~~~~~~l~alyr~A----Dv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L----~~A 398 (474)
T PRK10117 327 QLGWTPLYYLNQHFDRKLLMKIFRYS----DVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL----TSA 398 (474)
T ss_pred CCCceeEEEecCCCCHHHHHHHHHhc----cEEEecccccccccccchheeeecCCCCccEEEecccchHHHh----CCC
Confidence 99999999899999999999999999 9999999999999999999999 778999999998888 359
Q ss_pred EEeCCCCHHHHHHHHHHhhcCHHHHHHHH-HHHHHHHHcCCHHHHHHHHHHHHHHhHhc
Q 001492 618 LLVDPHDQQAIADALLKLVSEKNLWVECR-KNGWKNIHLFSWPEHCRTYLTRVAACRMR 675 (1067)
Q Consensus 618 llv~p~d~~~la~aL~~ll~d~~~~~~~~-~~~~~~~~~fsw~~~a~~~l~~~~~~~~~ 675 (1067)
++|||+|.+++|+||.++|++|...++.+ +..++.+..++...|++.|++.+..+..+
T Consensus 399 llVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~~~ 457 (474)
T PRK10117 399 LIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPR 457 (474)
T ss_pred eEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999865555444 44455568999999999999999887544
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-21 Score=236.76 Aligned_cols=525 Identities=15% Similarity=0.135 Sum_probs=353.1
Q ss_pred ceEEEEcCCchhHHHHHHHhc-CCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCC
Q 001492 306 PYVIHGHYADAGDSAALLSGA-LNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITST 384 (1067)
Q Consensus 306 pDvIh~h~~~a~~~a~~l~~~-~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S 384 (1067)
-|+|-.|......+...+... ..+.+-+..|+..+.. +.+ +..-....--..+.+++.+-..+
T Consensus 141 ~d~vwihdyhlmllp~~lr~~~~~~~ig~flhspfpss-Ei~---------------r~lp~r~eIl~gll~~~~i~f~t 204 (732)
T KOG1050|consen 141 GDIVWIHDYHLMLLPQMLRERFNSAKIGFFLHSPFPSS-EIY---------------RCLPVRKEILRGLLYDDLLGFHT 204 (732)
T ss_pred CCcEEEEcchhhccchhhhcccccceEEEeccCCCChH-HHH---------------HhcccHHHHHHhhhccCcccccc
Confidence 466555554322222233333 4566668888765432 111 11111001123467778877777
Q ss_pred HHHHHHHHhhcCCCchHHHHHHHHHHh-----cCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCC
Q 001492 385 KQEIDEQWGLYDGFDVKLEKVLRARAR-----RGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGS 459 (1067)
Q Consensus 385 ~~~~~~~~~~y~~~~~~l~~~l~~~~~-----~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~ 459 (1067)
.+....+... -.|.|..... .||+..|+.. .+..+|.|+|..+|......+
T Consensus 205 ~d~arhFls~-------c~R~l~~~~~s~~~~~~v~~rgr~~-~v~~~pigid~~r~v~~~~~~---------------- 260 (732)
T KOG1050|consen 205 DDYARHFLST-------CSRLLGLEVASKFPTAGVSGRGRDV-SVKALPIGIDVQRFVKLLELP---------------- 260 (732)
T ss_pred ccHHHHHHHH-------HHHHHHhhhhccCCcceEEecccee-eeeecccccchHHhhccccch----------------
Confidence 7666554332 2334444433 3566666555 789999999999998765322
Q ss_pred CCCCcchhhHhhhhhccC-CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc----EEE---EEec---CCChhhhh
Q 001492 460 SPKAIPAIWSDVMRFLTN-PHKPMILALSRPDPKKNITTLLKAFGECRPLRELAN----LTL---IMGN---RDDIEEMS 528 (1067)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~-~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~l---IvG~---~~~~~~l~ 528 (1067)
...+..+.+... .++.+|+.++|++..||+..-+.||+++ +.++|. +.+ ..+. +.++++++
T Consensus 261 ------~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~--L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k 332 (732)
T KOG1050|consen 261 ------YVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQF--LEEYPEWIDKVVLIQIENPKRTDGKEVEELK 332 (732)
T ss_pred ------hHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHH--HHhChhhhceEEEEEEecCCcccchHHHHHH
Confidence 222223333222 4788999999999999999999999999 456664 222 2222 33455677
Q ss_pred ccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc--C--CCEEE-cC
Q 001492 529 SGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAH--G--LPMVA-TK 603 (1067)
Q Consensus 529 ~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~--G--~PVVa-t~ 603 (1067)
......+.+|++........+.+.+...++..++.++|..| |++++.++.+|++++.+|+.+| + .+.|. ..
T Consensus 333 ~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Va----ev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef 408 (732)
T KOG1050|consen 333 FCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVA----EVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEF 408 (732)
T ss_pred HHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhh----hheeecccccccchhhhHHHHhhcccCCceEEeee
Confidence 77777888888888888877777889999999999999999 9999999999999999999999 2 44444 44
Q ss_pred CCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHH-HHHHcCCHHHHHHHHHHHHHHhHhcCCCCCCC
Q 001492 604 NGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGW-KNIHLFSWPEHCRTYLTRVAACRMRHPQWQTD 682 (1067)
Q Consensus 604 ~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~-~~~~~fsw~~~a~~~l~~~~~~~~~~~~~~~~ 682 (1067)
.|. .+..+ ...++++|+|.++++.+|..++++++...+++..-. +.+..++...|+..++..+.++-.... ...+
T Consensus 409 ~G~-~~tl~--d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~~l~~~~~~~~-~~~~ 484 (732)
T KOG1050|consen 409 IGD-DTTLE--DAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQGLKRIWKVGF-LGFR 484 (732)
T ss_pred ccc-ccccc--ccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHHhhhhhhhhcc-cccc
Confidence 554 44533 457899999999999999999998776665554433 334577888888888884444432221 1000
Q ss_pred CcchhhhhhhcccccchhhhhhhccccccCCCCCCCCCCCcccccCCCCchhhHHHHHHhhccCCCCCCcchHHHHhhhh
Q 001492 683 TPVDEMAAEESSFNDSLKDVQDMSLRLSVDGDKSSLNGSLDYTAASSGDPVQDQVKRVLSKIKKPDSDSNDKEAEKKLLE 762 (1067)
Q Consensus 683 ~~~~~~~~~~~~~~~sl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (1067)
. . | .-..+.+++.|+++++
T Consensus 485 ~----------------------~-------------------------~-~l~~~~~i~~y~~s~~------------- 503 (732)
T KOG1050|consen 485 V----------------------T-------------------------P-LLTAEHIVSDYKKSKK------------- 503 (732)
T ss_pred c----------------------c-------------------------c-ccChhHhhhhhhhccc-------------
Confidence 0 0 0 0223567888988877
Q ss_pred cccccCcccccCCeEEEEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHh-cCCCCC
Q 001492 763 NVVSKYPMLRRRRRLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNS-MKIEAN 841 (1067)
Q Consensus 763 ~~~~~~~~~~~r~klllia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~-l~i~~~ 841 (1067)
|+|++ |.|||+..+.... +...|+.|..++ +++ |.|+|||....+..++.. .++
T Consensus 504 -------------rli~l--dyd~t~~~~~~~~---~~~~l~~L~~dp--~n~--v~i~s~~~r~~l~~~~~~~~~l--- 558 (732)
T KOG1050|consen 504 -------------RLILL--DYDLTLIPPRSIK---AISILKDLCSDP--KNI--VYIVSGRGRSVLEKWFFGCKNL--- 558 (732)
T ss_pred -------------eEEEe--cccccccCCCCch---HHHHHHHHhcCC--CCe--EEEEEccCchhhhhhccccccc---
Confidence 88888 5558855543222 778889999886 445 999999999999777633 222
Q ss_pred CCCEEEEcCCceEEecCCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceE
Q 001492 842 EFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHC 921 (1067)
Q Consensus 842 ~~d~~I~~nGa~I~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 921 (1067)
++++.||..+..++.|.. .. .+.+|...+ .+..+.+.+++++++.+.+ ...
T Consensus 559 ---gl~aEhG~f~r~~~~w~~---~~-~~~~w~~~v-----~~i~~~~~ert~GS~ie~k-----------------~~~ 609 (732)
T KOG1050|consen 559 ---GLAAEHGYFVRIPGKWET---CV-LDLDWKDLV-----KDIFQYYTERTPGSYIERK-----------------ETA 609 (732)
T ss_pred ---eeecccCceeccCCceee---ec-ccccHHHHH-----HHHHHHHHhcCCCceeccc-----------------Cce
Confidence 688899999887765433 11 567777665 4567778888999888876 345
Q ss_pred EEEEecCCC---chHHHHHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCC
Q 001492 922 ISYLIKDPS---KARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTD 998 (1067)
Q Consensus 922 i~~~~~~~~---~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D 998 (1067)
+.|++.+.+ ..-...++.++|......++++.-. ..+||-|.|+|||.|...+...+.-+++.+++ +||... |
T Consensus 610 l~~hy~~ad~~~g~~qA~el~~~l~~~~~~~~v~~g~--~~Vev~~~gvsk~~~~~~~~~~~~~~~df~~c-~g~d~t-D 685 (732)
T KOG1050|consen 610 LVWHYRNADPEFGELQAKELLEHLESKNEPVEVVRGK--HIVEVRPQGVSKGLAAERILSEMVKEPDFVLC-IGDDRT-D 685 (732)
T ss_pred EEEeeeccCcchhHHHHHHHHHHhcccCCCeEEEecC--ceEEEcccccchHHHHHHHHHhcCCCcceEEE-ecCCCC-h
Confidence 677775543 2334567777776533345444433 48999999999999999999999844456666 999666 9
Q ss_pred hhhhhcCC
Q 001492 999 YEELISGA 1006 (1067)
Q Consensus 999 ~~eML~~a 1006 (1067)
++||...
T Consensus 686 -ed~~~~~ 692 (732)
T KOG1050|consen 686 -EDMFEFI 692 (732)
T ss_pred -HHHHHHH
Confidence 9999854
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.1e-21 Score=229.91 Aligned_cols=284 Identities=17% Similarity=0.200 Sum_probs=192.2
Q ss_pred CCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeC
Q 001492 304 VWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITS 383 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~ 383 (1067)
.+||+||++...........++..|+|+|++.|.+....+. .|+...++ ++..++.+|.|++.
T Consensus 123 ~~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~s~~---------------~~~~~~~~--~r~~~~~~d~ii~~ 185 (425)
T PRK05749 123 WRPKLVIIMETELWPNLIAELKRRGIPLVLANARLSERSFK---------------RYQKFKRF--YRLLFKNIDLVLAQ 185 (425)
T ss_pred hCCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChhhHH---------------HHHHHHHH--HHHHHHhCCEEEEC
Confidence 56999998854333333344567899999887755322211 11111121 34568899999999
Q ss_pred CHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCC
Q 001492 384 TKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKA 463 (1067)
Q Consensus 384 S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1067)
|+...+.+.. .|+ +.. +.++||+ +++.+.+...
T Consensus 186 S~~~~~~l~~------------------~g~-----~~~-i~vi~n~-~~d~~~~~~~---------------------- 218 (425)
T PRK05749 186 SEEDAERFLA------------------LGA-----KNE-VTVTGNL-KFDIEVPPEL---------------------- 218 (425)
T ss_pred CHHHHHHHHH------------------cCC-----CCC-cEecccc-cccCCCChhh----------------------
Confidence 9987776532 122 223 7888874 4433321110
Q ss_pred cchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHH
Q 001492 464 IPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLI 542 (1067)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~ 542 (1067)
.......+..+. +++++|+++|+. .|+...+++|+..+. +..|++.+ |+|.+++. ..++.+++
T Consensus 219 ~~~~~~~r~~~~--~~~~vil~~~~~--~~~~~~ll~A~~~l~--~~~~~~~liivG~g~~r----------~~~l~~~~ 282 (425)
T PRK05749 219 AARAATLRRQLA--PNRPVWIAASTH--EGEEELVLDAHRALL--KQFPNLLLILVPRHPER----------FKEVEELL 282 (425)
T ss_pred HHHHHHHHHHhc--CCCcEEEEeCCC--chHHHHHHHHHHHHH--HhCCCcEEEEcCCChhh----------HHHHHHHH
Confidence 000111122232 567888888874 688999999999884 34577765 77877632 24566777
Q ss_pred HhcCCCCcEEeCCCCC------------CCCHHHHHHHhhcCCcEEEe-cCCCCCCCHHHHHHHHcCCCEEEcCC-CCch
Q 001492 543 DKYDLYGQVAYPKHHK------------QYDVPEIYRLAAKTKGVFIN-PALVEPFGLTLIEAAAHGLPMVATKN-GGPV 608 (1067)
Q Consensus 543 ~~~~l~~~V~~~g~~~------------~~dl~~ly~~A~~~~dV~v~-ps~~EgfgltllEAmA~G~PVVat~~-Gg~~ 608 (1067)
.++++. .+.|.+... ..+++.+|+.| |++++ +|+.|++|++++||||||+|||++.. ++..
T Consensus 283 ~~~gl~-~~~~~~~~~~~~~~~v~l~~~~~el~~~y~~a----Di~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~ 357 (425)
T PRK05749 283 KKAGLS-YVRRSQGEPPSADTDVLLGDTMGELGLLYAIA----DIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFK 357 (425)
T ss_pred HhCCCc-EEEccCCCCCCCCCcEEEEecHHHHHHHHHhC----CEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHH
Confidence 887775 244444211 35899999999 99655 67889999999999999999999875 5666
Q ss_pred hhhccC-CceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHh
Q 001492 609 DIHRAL-NNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRM 674 (1067)
Q Consensus 609 eiv~~~-~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~ 674 (1067)
++++.. .+|+++.+.|+++++++|.++++|++.+++|++++++.++.. ....+++++.|...+.
T Consensus 358 e~~~~~~~~g~~~~~~d~~~La~~l~~ll~~~~~~~~m~~~a~~~~~~~--~~~~~~~~~~l~~~l~ 422 (425)
T PRK05749 358 EIFERLLQAGAAIQVEDAEDLAKAVTYLLTDPDARQAYGEAGVAFLKQN--QGALQRTLQLLEPYLP 422 (425)
T ss_pred HHHHHHHHCCCeEEECCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHhcc
Confidence 665542 468888899999999999999999999999999999998533 3566777777766543
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.9e-22 Score=220.07 Aligned_cols=198 Identities=10% Similarity=0.041 Sum_probs=134.8
Q ss_pred EEEEeCCCCCCCC-----chhhHHHHHHHHHHHHh-cCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCc
Q 001492 779 VIALDCYDSKGAP-----DKKMIQIMYDVFKAVRL-DHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGG 852 (1067)
Q Consensus 779 lia~DiDGTLl~~-----~~~i~~~~~~al~~l~~-~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa 852 (1067)
+|++|+||||++. ++.+++.++++|++|++ .| + .|+|+|||++..+.++++.+++ .+||+||+
T Consensus 16 li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g----~-~v~i~SGR~~~~~~~~~~~~~~------~~i~~nGa 84 (266)
T PRK10187 16 AWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATAND----G-ALALISGRSMVELDALAKPYRF------PLAGVHGA 84 (266)
T ss_pred EEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCC----C-cEEEEeCCCHHHHHHhcCcccc------eEEEeCCC
Confidence 4556999998873 56899999999999998 44 6 7999999999999999987554 48999999
Q ss_pred eEEecCCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCC-c
Q 001492 853 EMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPS-K 931 (1067)
Q Consensus 853 ~I~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~-~ 931 (1067)
+++...+... ....+..+...+ ...++..+.+.++...+.+ ...+++++.... .
T Consensus 85 ~i~~~~~~~~---~~~l~~~~~~~i-----~~~l~~~~~~~pg~~ve~k-----------------~~~~~~h~r~~~~~ 139 (266)
T PRK10187 85 ERRDINGKTH---IVHLPDAIARDI-----SVQLHTALAQLPGAELEAK-----------------GMAFALHYRQAPQH 139 (266)
T ss_pred eeecCCCCee---eccCChhHHHHH-----HHHHHHHhccCCCcEEEeC-----------------CcEEEEECCCCCcc
Confidence 9986531110 001111111111 0112222223333333332 233445553332 2
Q ss_pred hHHHHHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCC----c
Q 001492 932 ARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGA----H 1007 (1067)
Q Consensus 932 ~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~a----g 1007 (1067)
...+.++.+.+......+ .+.+.+ .++||.|.++|||.||++|++++|++.+++++ |||+.| | ++||+.+ |
T Consensus 140 ~~~~~~l~~~i~~~~~~~-~~~~g~-~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~-~GD~~n-D-~~mf~~~~~~~g 214 (266)
T PRK10187 140 EDALLALAQRITQIWPQL-ALQPGK-CVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF-VGDDLT-D-EAGFAVVNRLGG 214 (266)
T ss_pred HHHHHHHHHHHHhhCCce-EEeCCC-EEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE-EcCCcc-H-HHHHHHHHhcCC
Confidence 233445554544332222 334444 59999999999999999999999999999988 999999 9 9999998 9
Q ss_pred eEEEeCCCcc
Q 001492 1008 KTLIMKGVVE 1017 (1067)
Q Consensus 1008 ~gVaMgNA~e 1017 (1067)
+||+||||.+
T Consensus 215 ~~vavg~a~~ 224 (266)
T PRK10187 215 ISVKVGTGAT 224 (266)
T ss_pred eEEEECCCCC
Confidence 9999999983
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.8e-20 Score=218.71 Aligned_cols=263 Identities=13% Similarity=0.099 Sum_probs=180.0
Q ss_pred CCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeC
Q 001492 304 VWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITS 383 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~ 383 (1067)
.+||+||++++......+..+...++|++.+.++++... .+..+.+|.++++
T Consensus 103 ~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~~----------------------------~~~~~~ad~i~~~ 154 (380)
T PRK13609 103 EKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLHK----------------------------IWVHREVDRYFVA 154 (380)
T ss_pred hCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCCc----------------------------ccccCCCCEEEEC
Confidence 579999999876544444444556799887666542111 1246789999999
Q ss_pred CHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCC
Q 001492 384 TKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKA 463 (1067)
Q Consensus 384 S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1067)
|+...+.+.+ .|+ +..++.++++.++.. |.+...
T Consensus 155 s~~~~~~l~~------------------~gi-----~~~ki~v~G~p~~~~-f~~~~~---------------------- 188 (380)
T PRK13609 155 TDHVKKVLVD------------------IGV-----PPEQVVETGIPIRSS-FELKIN---------------------- 188 (380)
T ss_pred CHHHHHHHHH------------------cCC-----ChhHEEEECcccChH-HcCcCC----------------------
Confidence 9977665532 122 223788876655432 221110
Q ss_pred cchhhHhhhhhccCCCCcE-EEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHH
Q 001492 464 IPAIWSDVMRFLTNPHKPM-ILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKL 541 (1067)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~-Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l 541 (1067)
....+.++...+++++ +++.|++...||+..+++++.+. +++.+ ++|++. .....++.++
T Consensus 189 ---~~~~~~~~~l~~~~~~il~~~G~~~~~k~~~~li~~l~~~------~~~~~viv~G~~---------~~~~~~l~~~ 250 (380)
T PRK13609 189 ---PDIIYNKYQLCPNKKILLIMAGAHGVLGNVKELCQSLMSV------PDLQVVVVCGKN---------EALKQSLEDL 250 (380)
T ss_pred ---HHHHHHHcCCCCCCcEEEEEcCCCCCCcCHHHHHHHHhhC------CCcEEEEEeCCC---------HHHHHHHHHH
Confidence 0112234444556665 45568888889999999988643 34443 443322 1123455555
Q ss_pred HHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcC-CCCc----hhhhccCCc
Q 001492 542 IDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATK-NGGP----VDIHRALNN 616 (1067)
Q Consensus 542 ~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~-~Gg~----~eiv~~~~~ 616 (1067)
+..++ ++|.|+|++ ++++++|+.| |++|. ++.|++++||||||+|||+++ .+|. .+++. .+
T Consensus 251 ~~~~~--~~v~~~g~~--~~~~~l~~~a----D~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~--~~ 316 (380)
T PRK13609 251 QETNP--DALKVFGYV--ENIDELFRVT----SCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFE--RK 316 (380)
T ss_pred HhcCC--CcEEEEech--hhHHHHHHhc----cEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHH--hC
Confidence 55554 589999996 5799999999 99884 567999999999999999986 5542 12333 24
Q ss_pred eEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Q 001492 617 GLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 617 Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~ 672 (1067)
|+.+.+.|+++++++|.+++++++.+++|++++++....++++.+++.+++.+..+
T Consensus 317 G~~~~~~~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 317 GAAVVIRDDEEVFAKTEALLQDDMKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred CcEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 55555679999999999999999999999999988777889999999999887654
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.4e-22 Score=211.87 Aligned_cols=209 Identities=12% Similarity=0.073 Sum_probs=131.1
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||+++++.+++.++++|++++++| + .|+|||||++..+..+++.++++ ..++||+||+.|+...
T Consensus 1 ~i~~DlDGTLL~~~~~~~~~~~~~l~~l~~~g----i-~~~i~TgR~~~~~~~~~~~l~~~---~~~~I~~NGa~i~~~~ 72 (221)
T TIGR02463 1 WVFSDLDGTLLDSHSYDWQPAAPWLTRLQEAG----I-PVILCTSKTAAEVEYLQKALGLT---GDPYIAENGAAIHLEE 72 (221)
T ss_pred CEEEeCCCCCcCCCCCCcHHHHHHHHHHHHCC----C-eEEEEcCCCHHHHHHHHHHcCCC---CCcEEEeCCcEEEcCc
Confidence 46789999999887656666999999999997 8 89999999999999999998873 1479999999998753
Q ss_pred CCcccCCcCCCChhhhhccccccccchhHHHHHhhhh---cccCCCCCCCC------CCCccc--ccccCCceEEEEEe-
Q 001492 859 TYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMN---TTEGGENSKNS------SSPIQE--DQKSSNAHCISYLI- 926 (1067)
Q Consensus 859 ~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~---~~~~~~~~~~~------~~~~~~--~~~~~~~~ki~~~~- 926 (1067)
.+.. ...-..+...+ ..+.+...+..+.. ........... ...... ........+..+..
T Consensus 73 ~~~~----~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (221)
T TIGR02463 73 LWRE----EPGYPRIILGI----SYGIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWR 144 (221)
T ss_pred cccc----CCCceEEecCC----CHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEec
Confidence 2110 00000000011 11111111111100 00000000000 000000 00001112222333
Q ss_pred cCCCchHHHHHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCC
Q 001492 927 KDPSKARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGA 1006 (1067)
Q Consensus 927 ~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~a 1006 (1067)
.. ....+++.+.+...+ +.++.+ + .++||+|.+++||.|++++++++|++++++++ |||+.| | ++||+.+
T Consensus 145 ~~---~~~~~~~~~~l~~~~--~~~~~~-~-~~~ei~~~~~~Kg~al~~l~~~lgi~~~~vi~-~GD~~N-D-i~ml~~a 214 (221)
T TIGR02463 145 DS---DSRMPRFTALLADLG--LAIVQG-N-RFSHVLGASSSKGKAANWLKATYNQPDVKTLG-LGDGPN-D-LPLLEVA 214 (221)
T ss_pred Cc---hhHHHHHHHHHHHcC--CeEEec-C-CeeEEecCCCCHHHHHHHHHHHhCCCCCcEEE-ECCCHH-H-HHHHHhC
Confidence 21 224456666665543 444443 4 48999999999999999999999999999999 999999 9 9999999
Q ss_pred ceEEEeC
Q 001492 1007 HKTLIMK 1013 (1067)
Q Consensus 1007 g~gVaMg 1013 (1067)
|+|||+.
T Consensus 215 g~~va~~ 221 (221)
T TIGR02463 215 DYAVVIK 221 (221)
T ss_pred CceEEeC
Confidence 9999974
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.2e-22 Score=233.59 Aligned_cols=322 Identities=16% Similarity=0.169 Sum_probs=199.1
Q ss_pred HHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc-CCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhH
Q 001492 289 NMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA-LNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRI 367 (1067)
Q Consensus 289 ~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~-~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri 367 (1067)
.++.++.+.+. .-|+|-.|+.-...++.++.++ ...++.+..|..++.. +.+ . .++ ..-.++
T Consensus 130 ~FA~~i~~~~~-----~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~-e~f-r--~lP-----~r~eiL--- 192 (474)
T PF00982_consen 130 RFADAIAEVYR-----PGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPSS-EIF-R--CLP-----WREEIL--- 192 (474)
T ss_dssp HHHHHHGGG-------TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S----H-HHH-T--TST-----THHHHH---
T ss_pred HHHHHHHHhCc-----CCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCCH-HHH-h--hCC-----cHHHHH---
Confidence 34555555544 3589999987555555566554 4688999999876543 111 0 011 111122
Q ss_pred HHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhc---CcccCCCCCCCEEEeCCCCCCCCccCCCCCCc
Q 001492 368 EGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARR---GVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPE 444 (1067)
Q Consensus 368 ~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~---Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~ 444 (1067)
..+-.||.|-..+....+.+... ..+.|+.+... +|...|+.. ++.++|.|||++.|......++
T Consensus 193 ----~glL~aDlIgFqt~~~~~nFl~~-------~~r~lg~~~~~~~~~v~~~Gr~v-~v~~~pigId~~~~~~~~~~~~ 260 (474)
T PF00982_consen 193 ----RGLLGADLIGFQTFEYARNFLSC-------CKRLLGLEVDSDRGTVEYNGRRV-RVGVFPIGIDPDAFAQLARSPE 260 (474)
T ss_dssp ----HHHTTSSEEEESSHHHHHHHHHH-------HHHHS-EEEEETTE-EEETTEEE-EEEE------HHHHHHHHH-S-
T ss_pred ----HHhhcCCEEEEecHHHHHHHHHH-------HHHHcCCcccCCCceEEECCEEE-EEEEeeccCChHHHHhhccChH
Confidence 24678999999999988876543 33444333222 355555554 8999999999998865432233
Q ss_pred cccccccccCCCCCCCCCCcchhhHhhhhhccCCC-CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc----EE---E
Q 001492 445 VDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPH-KPMILALSRPDPKKNITTLLKAFGECRPLRELAN----LT---L 516 (1067)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~---l 516 (1067)
+...++ .++.. ..+ .++|+.++|+|+.||+...++||+++ |..+|. ++ +
T Consensus 261 v~~~~~-------------------~l~~~--~~~~~~ii~gvDrld~~kGi~~kl~Afe~f--L~~~P~~~~kv~liQi 317 (474)
T PF00982_consen 261 VQERAE-------------------ELREK--FKGKRKIIVGVDRLDYTKGIPEKLRAFERF--LERYPEYRGKVVLIQI 317 (474)
T ss_dssp --HHHH-------------------HHHHH--TTT-SEEEEEE--B-GGG-HHHHHHHHHHH--HHH-GGGTTTEEEEEE
T ss_pred HHHHHH-------------------HHHHh--cCCCcEEEEEeccchhhcCHHHHHHHHHHH--HHhCcCccCcEEEEEE
Confidence 322222 22222 134 58999999999999999999999999 345554 33 3
Q ss_pred EEecCC---ChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHH
Q 001492 517 IMGNRD---DIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAA 593 (1067)
Q Consensus 517 IvG~~~---~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAm 593 (1067)
.+.++. +++++..+..+.+++|+......++.|.+++.+.++.+++.++|+.| ||++++|++|||+|+.+|++
T Consensus 318 ~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~a----Dv~lvTslrDGmNLva~Eyv 393 (474)
T PF00982_consen 318 AVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAA----DVALVTSLRDGMNLVAKEYV 393 (474)
T ss_dssp --B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-----SEEEE--SSBS--HHHHHHH
T ss_pred eeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhh----hhEEecchhhccCCcceEEE
Confidence 445554 35678888889999999999999999999999999999999999999 99999999999999999999
Q ss_pred Hc-----CCCEEEcCCCCchhhhccCC-ceEEeCCCCHHHHHHHHHHhhcCHHHHHHH-HHHHHHHHHcCCHHHHHHHHH
Q 001492 594 AH-----GLPMVATKNGGPVDIHRALN-NGLLVDPHDQQAIADALLKLVSEKNLWVEC-RKNGWKNIHLFSWPEHCRTYL 666 (1067)
Q Consensus 594 A~-----G~PVVat~~Gg~~eiv~~~~-~Gllv~p~d~~~la~aL~~ll~d~~~~~~~-~~~~~~~~~~fsw~~~a~~~l 666 (1067)
|| |+.|++..+|+..++ . .+++|||.|++++|+||.++|++|...++. .+..++.+..++...|++.|+
T Consensus 394 a~q~~~~GvLiLSefaGaa~~L----~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l 469 (474)
T PF00982_consen 394 ACQDDNPGVLILSEFAGAAEQL----SEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFL 469 (474)
T ss_dssp HHS-TS--EEEEETTBGGGGT-----TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHH
T ss_pred EEecCCCCceEeeccCCHHHHc----CCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHH
Confidence 99 778899899987776 3 349999999999999999999987654444 445556678999999999999
Q ss_pred HHHH
Q 001492 667 TRVA 670 (1067)
Q Consensus 667 ~~~~ 670 (1067)
+.++
T Consensus 470 ~~L~ 473 (474)
T PF00982_consen 470 RDLK 473 (474)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 8775
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-21 Score=214.11 Aligned_cols=211 Identities=16% Similarity=0.134 Sum_probs=127.4
Q ss_pred EEEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEec
Q 001492 778 IVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYP 857 (1067)
Q Consensus 778 llia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~ 857 (1067)
-+|++|+||||+++++++++.++++|++++++| + .|+|||||++..+.+.++..... ..+++||+||+.|+..
T Consensus 6 klia~DlDGTLL~~~~~is~~~~~ai~~l~~~G----i-~~viaTGR~~~~i~~~l~~~~~~--~~~~~I~~NGa~I~~~ 78 (247)
T PTZ00174 6 TILLFDVDGTLTKPRNPITQEMKDTLAKLKSKG----F-KIGVVGGSDYPKIKEQLGEDVLE--DFDYVFSENGLVAYKD 78 (247)
T ss_pred eEEEEECcCCCcCCCCCCCHHHHHHHHHHHHCC----C-EEEEEcCCCHHHHHHHHhhhhhc--ccCeEEeCCceEEEEC
Confidence 367779999999998999999999999999997 7 89999999999998888753321 2467999999999864
Q ss_pred CCCcccCCcCCCChhhhhccccccccchhHHHHHhhh----hcccCCCCCCCCCCCcccccccCCceEEEEEecC-----
Q 001492 858 GTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLM----NTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKD----- 928 (1067)
Q Consensus 858 ~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~----- 928 (1067)
+ ... +...+......+.+.+.+.... ....... ......... ....+......
T Consensus 79 ~-~~i----------~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~-----~~~~~~~~~--~~~~~~~~~~~~~~~~ 140 (247)
T PTZ00174 79 G-ELF----------HSQSILKFLGEEKLKKFINFCLRYIADLDIPVK-----RGTFIEYRN--GMINISPIGRNCSQEE 140 (247)
T ss_pred C-eEE----------EEEcchhcCCHHHHHHHHHHHHHHHHhcCCccc-----eeeeEEcCC--ceEEeccccccCCHHH
Confidence 2 111 1111100001111122111110 0000000 000000000 00000000000
Q ss_pred -------CCchHHHHHHHHHHHhcCCcEEEEEeeC-CeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecC----CCC
Q 001492 929 -------PSKARRIDDLRQKLRMRGLRCHPMYCRN-STRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGE----SGD 996 (1067)
Q Consensus 929 -------~~~~~~~~el~~~L~~~~~~~~v~~s~~-~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGD----s~N 996 (1067)
........++.+.+......+.+.++.+ ..++||+|+++|||.||++|+++ ++++|| ||| ++|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~----~~evia-fGD~~~~~~N 215 (247)
T PTZ00174 141 RDEFEKYDKEHHIREKFIQDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND----FKEIHF-FGDKTFEGGN 215 (247)
T ss_pred HHHHHhcCCcchHHHHHHHHHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh----hhhEEE-EcccCCCCCC
Confidence 0001123455555644323345555653 24899999999999999999998 589999 999 999
Q ss_pred CChhhhhcCC-ceEEEeCCCcccch
Q 001492 997 TDYEELISGA-HKTLIMKGVVEKGS 1020 (1067)
Q Consensus 997 ~D~~eML~~a-g~gVaMgNA~e~~~ 1020 (1067)
| ++||+.+ -.|+.++||.+..+
T Consensus 216 -D-ieMl~~~~~~g~~v~n~~~~~~ 238 (247)
T PTZ00174 216 -D-YEIYNDPRTIGHSVKNPEDTIK 238 (247)
T ss_pred -c-HhhhhcCCCceEEeCCHHHHHH
Confidence 9 9999965 34566669995444
|
|
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.87 E-value=7e-21 Score=219.51 Aligned_cols=313 Identities=17% Similarity=0.199 Sum_probs=233.4
Q ss_pred ceEEEEcCCchhHHHHHHHhcC-CCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCC
Q 001492 306 PYVIHGHYADAGDSAALLSGAL-NVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITST 384 (1067)
Q Consensus 306 pDvIh~h~~~a~~~a~~l~~~~-giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S 384 (1067)
=|+|-.|+.....+...+..+. ..++.|+.|-.++..- + ++.+-+.+.--..+-.||.|-..+
T Consensus 148 gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPssE--v--------------fr~lP~r~eIl~gll~~dligFqt 211 (486)
T COG0380 148 GDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSSE--V--------------FRCLPWREEILEGLLGADLIGFQT 211 (486)
T ss_pred CCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCCHH--H--------------HhhCchHHHHHHHhhcCCeeEecC
Confidence 3899999875556666665544 4678899998766431 1 111111111123467899999999
Q ss_pred HHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCC--CCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCC
Q 001492 385 KQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHG--RYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPK 462 (1067)
Q Consensus 385 ~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g--~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1067)
+...+.+..... +.++.....++..-| ....++..+|.|||+..|.....++.++..
T Consensus 212 ~~y~~nF~~~~~-------r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~-------------- 270 (486)
T COG0380 212 ESYARNFLDLCS-------RLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEK-------------- 270 (486)
T ss_pred HHHHHHHHHHHH-------HhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhH--------------
Confidence 998887765533 233211112222221 233489999999999999866543333222
Q ss_pred CcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc----EE---EEEecCCChh---hhhccch
Q 001492 463 AIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELAN----LT---LIMGNRDDIE---EMSSGNA 532 (1067)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~---lIvG~~~~~~---~l~~~~~ 532 (1067)
+.++.+... .++++|+.++|+|+.||+...+.||++| |..+|. ++ +..+++.+.+ .+..+..
T Consensus 271 -----~~el~~~~~-~~~kiivgvDRlDy~kGi~~rl~Afe~l--L~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~ 342 (486)
T COG0380 271 -----VLELKAELG-RNKKLIVGVDRLDYSKGIPQRLLAFERL--LEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIE 342 (486)
T ss_pred -----HHHHHHHhc-CCceEEEEehhcccccCcHHHHHHHHHH--HHhChhhhCceEEEEecCCCccccHHHHHHHHHHH
Confidence 333333332 3388999999999999999999999999 466665 22 3445555444 5778888
Q ss_pred HHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc-----CCCEEEcCCCCc
Q 001492 533 SVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAH-----GLPMVATKNGGP 607 (1067)
Q Consensus 533 ~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~-----G~PVVat~~Gg~ 607 (1067)
+.+++|+..++..++.|..+|+..++++++.++|+.| |+++++|++|||+||..|+.|| |..|++..+|+.
T Consensus 343 ~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~a----Dv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa 418 (486)
T COG0380 343 ELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAA----DVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAA 418 (486)
T ss_pred HHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhh----ceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccch
Confidence 9999999999999999999999999999999999999 9999999999999999999999 899999999999
Q ss_pred hhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHH-HHHHHHcCCHHHHHHHHHHHHHH
Q 001492 608 VDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKN-GWKNIHLFSWPEHCRTYLTRVAA 671 (1067)
Q Consensus 608 ~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~-~~~~~~~fsw~~~a~~~l~~~~~ 671 (1067)
.++ ..+++|||+|.+++|++|.++|+++...++.+.. .++.+..++...|+..|++.+..
T Consensus 419 ~~L----~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 419 SEL----RDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQ 479 (486)
T ss_pred hhh----ccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 988 4599999999999999999999977655555544 44556899999999999998876
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.1e-21 Score=225.25 Aligned_cols=255 Identities=14% Similarity=0.202 Sum_probs=162.9
Q ss_pred ccCcccccCCeEEEEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCE
Q 001492 766 SKYPMLRRRRRLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDA 845 (1067)
Q Consensus 766 ~~~~~~~~r~klllia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~ 845 (1067)
+..|.-...+| +|++|+||||+++++.+++.++++|++++++| + .|+|||||++..+..+++++++ .++
T Consensus 407 ~~~~~~~~~~K--LIfsDLDGTLLd~d~~i~~~t~eAL~~L~ekG----I-~~VIATGRs~~~i~~l~~~Lgl----~~~ 475 (694)
T PRK14502 407 SRLPSSGQFKK--IVYTDLDGTLLNPLTYSYSTALDALRLLKDKE----L-PLVFCSAKTMGEQDLYRNELGI----KDP 475 (694)
T ss_pred ccCCCcCceee--EEEEECcCCCcCCCCccCHHHHHHHHHHHHcC----C-eEEEEeCCCHHHHHHHHHHcCC----CCe
Confidence 44444344456 45559999999987778789999999999997 8 8999999999999999999887 358
Q ss_pred EEEcCCceEEecCCCcccCCcCCCChhhhh--ccccccccchhHHHHHhhhhccc--------CCC--CCCCCCCCcc--
Q 001492 846 LICSSGGEMYYPGTYTEEGGKLFPDPDYAS--HIDYRWGCDGLKKTIWKLMNTTE--------GGE--NSKNSSSPIQ-- 911 (1067)
Q Consensus 846 ~I~~nGa~I~~~~~~~~~~~~~~~d~~~~~--~i~~~~~~~~l~~~l~~~~~~~~--------~~~--~~~~~~~~~~-- 911 (1067)
+||+||+.|+.+.+... .....+..... .....+..+.++..+..+..... ... .....+....
T Consensus 476 ~I~eNGA~I~~~~~~~~--~~~~~~~~~~~~iI~~~~l~~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei 553 (694)
T PRK14502 476 FITENGGAIFIPKDYFR--LPFAYDRVAGNYLVIELGMAYKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDV 553 (694)
T ss_pred EEEcCCCEEEECCCccc--ccccccccCCCeEEEEcCCCHHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHH
Confidence 99999999998653110 00000000000 01111222333333322211100 000 0000000000
Q ss_pred -----------cccc-cCCceEEEEEecCCCchHHHHHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHH
Q 001492 912 -----------EDQK-SSNAHCISYLIKDPSKARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVR 979 (1067)
Q Consensus 912 -----------~~~~-~~~~~ki~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~ 979 (1067)
.... .....++.+. .+ ...++++.+.+...+ +++.. +.+++||+ .++|||+||++|+++
T Consensus 554 ~~~TgL~~~~a~~a~~Re~seKIl~~-gd---~e~Leel~~~L~~~~--l~v~~--g~rfleI~-~gvdKG~AL~~L~e~ 624 (694)
T PRK14502 554 SRLTDLNLKQAELAKQREYSETVHIE-GD---KRSTNIVLNHIQQSG--LEYSF--GGRFYEVT-GGNDKGKAIKILNEL 624 (694)
T ss_pred HHhhCCCHHHHHHHhhccCceeEEEc-CC---HHHHHHHHHHHHHcC--cEEEE--CCEEEEeC-CCCCHHHHHHHHHHH
Confidence 0000 1122344333 21 235678888887663 44444 44699999 599999999999999
Q ss_pred hCCCcccEEEEe--cCCCCCChhhhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHH
Q 001492 980 WRLNVANMFVIL--GESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANAL 1057 (1067)
Q Consensus 980 ~gi~~e~vva~f--GDs~N~D~~eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al 1057 (1067)
+|++.+++++ | ||+.| | ++||+.+++||||++-....+.+ ..++.. .|+.....|-..|+
T Consensus 625 ~gI~~~eVia-falGDs~N-D-isMLe~Ag~gVAM~~~~~~~~~l--------------~~~~~~-~~~~~GP~GW~eai 686 (694)
T PRK14502 625 FRLNFGNIHT-FGLGDSEN-D-YSMLETVDSPILVQRPGNKWHKM--------------RLRNPS-YVKGVGPEGFSRAV 686 (694)
T ss_pred hCCCccceEE-EEcCCcHh-h-HHHHHhCCceEEEcCCCCCCCcc--------------CCCCce-ecCCCCcHHHHHHH
Confidence 9999999999 8 99999 9 99999999999999888444321 233444 55788999998888
Q ss_pred Hhh
Q 001492 1058 RQV 1060 (1067)
Q Consensus 1058 ~~~ 1060 (1067)
.++
T Consensus 687 ~~~ 689 (694)
T PRK14502 687 TDI 689 (694)
T ss_pred HHH
Confidence 775
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-19 Score=211.92 Aligned_cols=264 Identities=13% Similarity=0.033 Sum_probs=184.1
Q ss_pred CCceEEEEcCCc-hh---HHHHHHH--hcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccC
Q 001492 304 VWPYVIHGHYAD-AG---DSAALLS--GALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAA 377 (1067)
Q Consensus 304 ~~pDvIh~h~~~-a~---~~a~~l~--~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~A 377 (1067)
.+||+||++++. .. ..+..+. ...++|++.++++++... ..+..+.+
T Consensus 99 ~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~---------------------------~~w~~~~~ 151 (382)
T PLN02605 99 YKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH---------------------------PTWFHKGV 151 (382)
T ss_pred cCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC---------------------------cccccCCC
Confidence 579999997653 22 2222222 135799998888763110 12246889
Q ss_pred CEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCC
Q 001492 378 ELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTD 457 (1067)
Q Consensus 378 d~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~ 457 (1067)
|.++++|+...+.+... |+ +.+++.+++++++.+.+.+..
T Consensus 152 d~~~~~s~~~~~~l~~~------------------g~-----~~~ki~v~g~~v~~~f~~~~~----------------- 191 (382)
T PLN02605 152 TRCFCPSEEVAKRALKR------------------GL-----EPSQIRVYGLPIRPSFARAVR----------------- 191 (382)
T ss_pred CEEEECCHHHHHHHHHc------------------CC-----CHHHEEEECcccCHhhccCCC-----------------
Confidence 99999998776655332 22 224899999999875443211
Q ss_pred CCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc--cCCCc--EEEEEecCCChhhhhccchH
Q 001492 458 GSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPL--RELAN--LTLIMGNRDDIEEMSSGNAS 533 (1067)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l--~~~~~--l~lIvG~~~~~~~l~~~~~~ 533 (1067)
.....+.++..++++++|+++||....|++..+++++..+... ...++ +.+++|.++.
T Consensus 192 --------~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~---------- 253 (382)
T PLN02605 192 --------PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK---------- 253 (382)
T ss_pred --------CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH----------
Confidence 0112234556677889999999999999999999999765210 01233 3346675421
Q ss_pred HHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCC------CCc
Q 001492 534 VLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKN------GGP 607 (1067)
Q Consensus 534 ~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~------Gg~ 607 (1067)
...++... ....+|.|.|++ ++++++|++| |++|.++ .|+|++||||||+|||+++. |+.
T Consensus 254 ~~~~L~~~----~~~~~v~~~G~~--~~~~~l~~aa----Dv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~ 319 (382)
T PLN02605 254 LQSKLESR----DWKIPVKVRGFV--TNMEEWMGAC----DCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNV 319 (382)
T ss_pred HHHHHHhh----cccCCeEEEecc--ccHHHHHHhC----CEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhH
Confidence 12223222 223469999996 5899999999 9999864 58999999999999999983 444
Q ss_pred hhhhccCCceEEeCCCCHHHHHHHHHHhhcC-HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 001492 608 VDIHRALNNGLLVDPHDQQAIADALLKLVSE-KNLWVECRKNGWKNIHLFSWPEHCRTYLTRV 669 (1067)
Q Consensus 608 ~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d-~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~ 669 (1067)
..++ +.+.|+++ .|+++++++|.+++.+ ++.+++|++++++.....+++.+++.+.+..
T Consensus 320 ~~i~-~~g~g~~~--~~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~~ 379 (382)
T PLN02605 320 PYVV-DNGFGAFS--ESPKEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVHDLHELV 379 (382)
T ss_pred HHHH-hCCceeec--CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHh
Confidence 4444 45567655 7999999999999998 9999999999999888888888887776654
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.4e-20 Score=212.47 Aligned_cols=265 Identities=20% Similarity=0.157 Sum_probs=178.5
Q ss_pred CCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeC
Q 001492 304 VWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITS 383 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~ 383 (1067)
....|++.+.+.+..++.. ..+.++|+.+++.+.... +. ... .. ..|+.+++.||.|+++
T Consensus 101 ~~~~i~~~~~P~~~~~~~~---~~~~~~Vyd~~D~~~~~~------~~-~~~--------~~--~~e~~~~~~ad~vi~~ 160 (373)
T cd04950 101 FGRPILWYYTPYTLPVAAL---LQASLVVYDCVDDLSAFP------GG-PPE--------LL--EAERRLLKRADLVFTT 160 (373)
T ss_pred CCCcEEEEeCccHHHHHhh---cCCCeEEEEcccchhccC------CC-CHH--------HH--HHHHHHHHhCCEEEEC
Confidence 3456777776655443333 567899999998643221 11 110 01 3477889999999999
Q ss_pred CHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCC
Q 001492 384 TKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKA 463 (1067)
Q Consensus 384 S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1067)
|+...+.+.... +++.+||||+|.+.|.+...... .
T Consensus 161 S~~l~~~~~~~~--------------------------~~i~~i~ngvd~~~f~~~~~~~~------------------~ 196 (373)
T cd04950 161 SPSLYEAKRRLN--------------------------PNVVLVPNGVDYEHFAAARDPPP------------------P 196 (373)
T ss_pred CHHHHHHHhhCC--------------------------CCEEEcccccCHHHhhcccccCC------------------C
Confidence 997665432211 28999999999999875431000 0
Q ss_pred cchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHH
Q 001492 464 IPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLI 542 (1067)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~ 542 (1067)
+ +.....++++|+|+|++.++++++.+.++.... |++.+ ++|.++...+.
T Consensus 197 -~-------~~~~~~~~~~i~y~G~l~~~~d~~ll~~la~~~------p~~~~vliG~~~~~~~~--------------- 247 (373)
T cd04950 197 -P-------ADLAALPRPVIGYYGAIAEWLDLELLEALAKAR------PDWSFVLIGPVDVSIDP--------------- 247 (373)
T ss_pred -h-------hHHhcCCCCEEEEEeccccccCHHHHHHHHHHC------CCCEEEEECCCcCccCh---------------
Confidence 0 001234678999999999988887666555432 45555 77876321110
Q ss_pred HhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCC-----CCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCce
Q 001492 543 DKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALV-----EPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNG 617 (1067)
Q Consensus 543 ~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~-----EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~G 617 (1067)
..+...++|+|+|+++.++++.+|+.+ |++++|+.. +++|++++||||||+|||+|+.++..+ ....+
T Consensus 248 ~~~~~~~nV~~~G~~~~~~l~~~l~~~----Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~~---~~~~~ 320 (373)
T cd04950 248 SALLRLPNVHYLGPKPYKELPAYLAGF----DVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVRR---YEDEV 320 (373)
T ss_pred hHhccCCCEEEeCCCCHHHHHHHHHhC----CEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHHh---hcCcE
Confidence 011124789999999999999999999 999999763 467999999999999999998765443 33334
Q ss_pred EEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 001492 618 LLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAA 671 (1067)
Q Consensus 618 llv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~ 671 (1067)
++ .+.|+++++++|.+++.++...... ...+.++.|||+..++++++.+.+
T Consensus 321 ~~-~~~d~~~~~~ai~~~l~~~~~~~~~--~~~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 321 VL-IADDPEEFVAAIEKALLEDGPARER--RRLRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred EE-eCCCHHHHHHHHHHHHhcCCchHHH--HHHHHHHHCCHHHHHHHHHHHHHh
Confidence 44 4569999999999976643221111 122245799999999999976654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.4e-21 Score=203.34 Aligned_cols=199 Identities=17% Similarity=0.279 Sum_probs=133.4
Q ss_pred EEEEeCCCCCCCCc-hhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEec
Q 001492 779 VIALDCYDSKGAPD-KKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYP 857 (1067)
Q Consensus 779 lia~DiDGTLl~~~-~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~ 857 (1067)
+|++|+||||++++ ..+++.++++|++|+++| + .|+|+|||++..+..+++.++ +++||+||+.|++.
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~l~~~g----~-~~~i~TGR~~~~~~~~~~~~~------~~~i~~nGa~i~~~ 69 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALERLREAG----V-KVVLVTGRSLAEIKELLKQLP------LPLIAENGALIFYP 69 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHHHHHCC----C-EEEEECCCCHHHHHHHHHhCC------CCEEECCCcEEEEC
Confidence 35679999998876 789999999999999996 7 899999999999999998832 47999999999875
Q ss_pred CCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCC-chHHHH
Q 001492 858 GTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPS-KARRID 936 (1067)
Q Consensus 858 ~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~-~~~~~~ 936 (1067)
+.... .. ....|...+.. . +.+...+ ....... . .........++.|++.... ......
T Consensus 70 ~~~~~---~~-~~~~~~~~~~~--~-~~~~~~~----~~~~~~~-----~----~~~~e~~~~~~~~~~~~~~~~~~~~~ 129 (204)
T TIGR01484 70 GEILY---IE-PSDVFEEILGI--K-EEIGAEL----KSLSEHY-----V----GTFIEDKAIAVAIHYVGAELGQELDS 129 (204)
T ss_pred CEEEE---Ec-ccccHHHHHHh--h-hhcCcee----eeecccc-----c----cceeecccceeeEEEeccchhhHHHH
Confidence 32111 00 01111111100 0 0000000 0000000 0 0000123445666654321 112233
Q ss_pred HHHHHHHhcC---CcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEe
Q 001492 937 DLRQKLRMRG---LRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIM 1012 (1067)
Q Consensus 937 el~~~L~~~~---~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaM 1012 (1067)
.+...+.... ..+.++++++. ++||+|++++|+.|++++++++|++++++++ |||+.| | ++||+.++++|||
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~s~~~-~~ev~p~~~~K~~~~~~~~~~~~~~~~~~~~-~GD~~n-D-~~~~~~~~~~vam 204 (204)
T TIGR01484 130 KMRERLEKIGRNDLELEAIYVGKT-DLEVLPAGVDKGSALQALLKELNGKRDEILA-FGDSGN-D-EEMFEVAGLAVAV 204 (204)
T ss_pred HHHHHHHhhccccCcEEEEEecCC-EEEEecCCCChHHHHHHHHHHhCCCHHHEEE-EcCCHH-H-HHHHHHcCCceEC
Confidence 4444444332 34677666765 9999999999999999999999999999999 999999 9 9999999999998
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.8e-19 Score=205.49 Aligned_cols=266 Identities=14% Similarity=0.104 Sum_probs=180.7
Q ss_pred CCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeC
Q 001492 304 VWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITS 383 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~ 383 (1067)
.+||+||++++.........++.+++|++...++.... . .+..+.+|.+++.
T Consensus 103 ~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~-----------------------~-----~w~~~~~d~~~v~ 154 (391)
T PRK13608 103 EKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLH-----------------------K-----NWITPYSTRYYVA 154 (391)
T ss_pred hCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCcc-----------------------c-----ccccCCCCEEEEC
Confidence 57999999877543322233345689987655543100 0 1235789999999
Q ss_pred CHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCC
Q 001492 384 TKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKA 463 (1067)
Q Consensus 384 S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1067)
|+...+.+.+ +|+ +..++.+++++++.. |.....
T Consensus 155 s~~~~~~l~~------------------~gi-----~~~ki~v~GiPv~~~-f~~~~~---------------------- 188 (391)
T PRK13608 155 TKETKQDFID------------------VGI-----DPSTVKVTGIPIDNK-FETPID---------------------- 188 (391)
T ss_pred CHHHHHHHHH------------------cCC-----CHHHEEEECeecChH-hccccc----------------------
Confidence 9987766532 222 123888887777643 321110
Q ss_pred cchhhHhhhhhccCCCCcE-EEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE--EEecCCChhhhhccchHHHHHHHH
Q 001492 464 IPAIWSDVMRFLTNPHKPM-ILALSRPDPKKNITTLLKAFGECRPLRELANLTL--IMGNRDDIEEMSSGNASVLITVLK 540 (1067)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~-Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l--IvG~~~~~~~l~~~~~~~~~~i~~ 540 (1067)
....+.++..++++++ +++.|++...||+..+++++... .+++.+ ++|..+ ....++.+
T Consensus 189 ---~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~~~~-----~~~~~~vvv~G~~~----------~l~~~l~~ 250 (391)
T PRK13608 189 ---QKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDILAK-----SANAQVVMICGKSK----------ELKRSLTA 250 (391)
T ss_pred ---HHHHHHHcCCCCCCCEEEEECCCcccchhHHHHHHHHHhc-----CCCceEEEEcCCCH----------HHHHHHHH
Confidence 0112233444556665 55789999899999999986432 234433 444332 11222332
Q ss_pred HHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCC-CC----chhhhccCC
Q 001492 541 LIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKN-GG----PVDIHRALN 615 (1067)
Q Consensus 541 l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~-Gg----~~eiv~~~~ 615 (1067)
.++..++|.|.|+. ++++++|+.| |++|. .+.|+|+.||||+|+|+|+++. +| ...++.+.+
T Consensus 251 ---~~~~~~~v~~~G~~--~~~~~~~~~a----Dl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G 317 (391)
T PRK13608 251 ---KFKSNENVLILGYT--KHMNEWMASS----QLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKG 317 (391)
T ss_pred ---HhccCCCeEEEecc--chHHHHHHhh----hEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCC
Confidence 23345689999985 6899999999 99986 3579999999999999999964 33 222444555
Q ss_pred ceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhcC
Q 001492 616 NGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRMRH 676 (1067)
Q Consensus 616 ~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~~ 676 (1067)
.|+++ .|+++++++|.++++|++.+++|++++++..+.|+++.+++.+++++....+.+
T Consensus 318 ~g~~~--~~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 318 FGKIA--DTPEEAIKIVASLTNGNEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred cEEEe--CCHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhhh
Confidence 56554 589999999999999999999999999998889999999999999987665543
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-20 Score=194.79 Aligned_cols=162 Identities=31% Similarity=0.520 Sum_probs=142.2
Q ss_pred ccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEe
Q 001492 475 LTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAY 553 (1067)
Q Consensus 475 ~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~ 553 (1067)
....++++|+++||+.+.||+..+++|+..+.. +..+++.+ |+|+++ +...+...+..+++..++.|
T Consensus 10 ~~~~~~~~il~~g~~~~~K~~~~li~a~~~l~~-~~~~~~~l~i~G~~~-----------~~~~~~~~~~~~~~~~~i~~ 77 (172)
T PF00534_consen 10 KIPDKKKIILFIGRLDPEKGIDLLIEAFKKLKE-KKNPNYKLVIVGDGE-----------YKKELKNLIEKLNLKENIIF 77 (172)
T ss_dssp TT-TTSEEEEEESESSGGGTHHHHHHHHHHHHH-HHHTTEEEEEESHCC-----------HHHHHHHHHHHTTCGTTEEE
T ss_pred CCCCCCeEEEEEecCccccCHHHHHHHHHHHHh-hcCCCeEEEEEcccc-----------cccccccccccccccccccc
Confidence 345678899999999999999999999999853 12466665 788554 24567788889999999999
Q ss_pred CCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHH
Q 001492 554 PKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALL 633 (1067)
Q Consensus 554 ~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~ 633 (1067)
++..+.+++..+|+.| |++|+||..|+||++++|||+||+|||+++.|++.|++.++.+|+++++.|+++++++|.
T Consensus 78 ~~~~~~~~l~~~~~~~----di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~ 153 (172)
T PF00534_consen 78 LGYVPDDELDELYKSS----DIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIE 153 (172)
T ss_dssp EESHSHHHHHHHHHHT----SEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHH
T ss_pred cccccccccccccccc----eeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHH
Confidence 9999888999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCHHHHHHHHHHHHHH
Q 001492 634 KLVSEKNLWVECRKNGWKN 652 (1067)
Q Consensus 634 ~ll~d~~~~~~~~~~~~~~ 652 (1067)
+++++++.++.|+++++++
T Consensus 154 ~~l~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 154 KLLNDPELRQKLGKNARER 172 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCHHHHHHHHHHhcCC
Confidence 9999999999999999874
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.9e-19 Score=192.02 Aligned_cols=199 Identities=16% Similarity=0.187 Sum_probs=121.5
Q ss_pred EEEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEec
Q 001492 778 IVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYP 857 (1067)
Q Consensus 778 llia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~ 857 (1067)
+++++|+||||++++++++++++++|++|+++ + .|++||||++..+.+.+..... .+++++||+||+.|+..
T Consensus 8 ~i~~~D~DGTLl~~~~~i~~~~~~ai~~l~~~-----i-~fviaTGR~~~~~~~~~~~~~~--~~~~~~I~~NGa~i~~~ 79 (245)
T PLN02423 8 VIALFDVDGTLTAPRKEATPEMLEFMKELRKV-----V-TVGVVGGSDLSKISEQLGKTVI--NDYDYVFSENGLVAHKD 79 (245)
T ss_pred eEEEEeccCCCcCCCCcCCHHHHHHHHHHHhC-----C-EEEEECCcCHHHHHHHhccccc--ccCCEEEECCceEEEeC
Confidence 35567999999999889999999999999953 6 8999999999988877766311 12357999999999854
Q ss_pred CCCcccCCcCCCChhhhhccccccccchhHHHHHhhhh----c-ccCCCCCCCCCCCcccccccC---------------
Q 001492 858 GTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMN----T-TEGGENSKNSSSPIQEDQKSS--------------- 917 (1067)
Q Consensus 858 ~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~----~-~~~~~~~~~~~~~~~~~~~~~--------------- 917 (1067)
+.... ...+......+.+++.+..... . ...... . ..+.....
T Consensus 80 g~~i~-----------~~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~----~--~ie~~~~i~~~~~~~~~~~~~~~ 142 (245)
T PLN02423 80 GKLIG-----------TQSLKSFLGEDKLKEFINFTLHYIADLDIPIKRG----T--FIEFRSGMLNVSPIGRNCSQEER 142 (245)
T ss_pred CEEEE-----------EecccccCCHHHHHHHHHHHHHHHHHcCCccccC----C--eEEccCCccccCcccccCCHhHH
Confidence 31111 1001111111111221111100 0 000000 0 00000000
Q ss_pred -CceEEEEEecCCCchHHHHHHHHHHHhcCCcEEEEEeeCC-eeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecC--
Q 001492 918 -NAHCISYLIKDPSKARRIDDLRQKLRMRGLRCHPMYCRNS-TRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGE-- 993 (1067)
Q Consensus 918 -~~~ki~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~-~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGD-- 993 (1067)
...++.. + .....++.+.+......+.++.+.++ .++||+|+|+|||.||+.|+ +++++|| |||
T Consensus 143 ~~~~~i~~-i-----~~~~~~~~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~-----~~~e~~a-FGD~~ 210 (245)
T PLN02423 143 DEFEKYDK-V-----HNIRPKMVSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE-----DFDEIHF-FGDKT 210 (245)
T ss_pred hhHHhhCc-c-----chHHHHHHHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc-----CcCeEEE-EeccC
Confidence 0001100 0 11234555555544344566666653 59999999999999999999 8999999 999
Q ss_pred --CCCCChhhhhcC-CceEEEeCCC
Q 001492 994 --SGDTDYEELISG-AHKTLIMKGV 1015 (1067)
Q Consensus 994 --s~N~D~~eML~~-ag~gVaMgNA 1015 (1067)
++| | ++||+. .-.++.+.+=
T Consensus 211 ~~~~N-D-~eMl~~~~~~~~~~~~~ 233 (245)
T PLN02423 211 YEGGN-D-HEIFESERTIGHTVTSP 233 (245)
T ss_pred CCCCC-c-HHHHhCCCcceEEeCCH
Confidence 799 9 999996 5567777654
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.5e-19 Score=190.27 Aligned_cols=212 Identities=12% Similarity=0.093 Sum_probs=126.2
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||++. ..+++.++++|++++++| + .|++||||++..+..+++++++. +++||+||+.|+++.
T Consensus 1 li~~DlDGTLl~~-~~~~~~~~~ai~~l~~~G----~-~~vi~TgR~~~~~~~~~~~lg~~----~~~I~~NGa~I~~~~ 70 (225)
T TIGR02461 1 VIFTDLDGTLLPP-GYEPGPAREALEELKDLG----F-PIVFVSSKTRAEQEYYREELGVE----PPFIVENGGAIFIPR 70 (225)
T ss_pred CEEEeCCCCCcCC-CCCchHHHHHHHHHHHCC----C-EEEEEeCCCHHHHHHHHHHcCCC----CcEEEcCCcEEEecC
Confidence 3667999998885 456678999999999997 7 89999999999999999998873 479999999999864
Q ss_pred CCcc-cCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCC-------CC---cccccccCCceEEEEEec
Q 001492 859 TYTE-EGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSS-------SP---IQEDQKSSNAHCISYLIK 927 (1067)
Q Consensus 859 ~~~~-~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~-------~~---~~~~~~~~~~~ki~~~~~ 927 (1067)
.... ..+.-..+..+ ......+..+.++..+........-........ .. ...........++.+. .
T Consensus 71 ~~~~~~~~~~~~~~~~-~i~~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~-~ 148 (225)
T TIGR02461 71 GYFPFPVGAGREVGNY-EVIELGKPVAKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFL-W 148 (225)
T ss_pred ccccccccccccCCCe-EEEEcCCCHHHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccC-C
Confidence 2100 00000000000 001111122222222221111000000000000 00 0000000112232222 2
Q ss_pred CCCchHHHHHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCC--CcccEEEEecCCCCCChhhhhcC
Q 001492 928 DPSKARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRL--NVANMFVILGESGDTDYEELISG 1005 (1067)
Q Consensus 928 ~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi--~~e~vva~fGDs~N~D~~eML~~ 1005 (1067)
++ ..+.++.+.+.. ..+++..+. .++++ +.++|||.|++.|++++++ +.+++++ |||+.| | ++||+.
T Consensus 149 ~~---e~~~~~~~~~~~--~~~~~~~s~--~~~~i-~~~~sK~~al~~l~~~~~~~~~~~~~i~-~GD~~n-D-~~ml~~ 217 (225)
T TIGR02461 149 SR---EGWEAILVTARA--RGLKYTHGG--RFYTV-HGGSDKGKAIKRLLDLYKLRPGAIESVG-LGDSEN-D-FPMFEV 217 (225)
T ss_pred CH---HHHHHHHHHHHH--cCCcEEECC--EEEEE-CCCCCHHHHHHHHHHHhccccCcccEEE-EcCCHH-H-HHHHHh
Confidence 22 235566666643 234555544 36776 5599999999999999987 6668999 999999 9 999999
Q ss_pred CceEEEeC
Q 001492 1006 AHKTLIMK 1013 (1067)
Q Consensus 1006 ag~gVaMg 1013 (1067)
+|+||++|
T Consensus 218 ag~~v~v~ 225 (225)
T TIGR02461 218 VDLAFLVG 225 (225)
T ss_pred CCCcEecC
Confidence 99999986
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.7e-16 Score=169.83 Aligned_cols=391 Identities=17% Similarity=0.252 Sum_probs=256.9
Q ss_pred CChHHHHHHHHHHHHHcC-CCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCcc
Q 001492 190 TGGQIKYVVELARALARM-PGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLR 268 (1067)
Q Consensus 190 ~GG~~~yv~~LA~aLa~~-G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~ 268 (1067)
.||-++....-.+.+.+. +. +...++|..++. .|.+.|......++.+ -.++++.++.+.. +++-
T Consensus 56 GGGGErVLW~Avr~~q~k~~n-~~~viYsGD~n~--------t~~~IL~k~k~~F~id-lDs~nI~Fi~Lk~----R~lV 121 (465)
T KOG1387|consen 56 GGGGERVLWKAVRITQRKFPN-NVIVIYSGDFNV--------TPENILNKVKNKFDID-LDSDNIFFIYLKL----RYLV 121 (465)
T ss_pred CCCcceehhHHHHHHHHhCCC-ceEEEEeCCCCC--------CHHHHHHHHHHhcCce-ecccceEEEEEEe----eeee
Confidence 678888888888888653 42 555666664321 1222222111111111 1255777776654 4455
Q ss_pred cccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCch--hhHHHH
Q 001492 269 KELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGR--NKLEQL 346 (1067)
Q Consensus 269 k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~--~~~~~l 346 (1067)
...-|++.--....+-..+.. +...++ ..|||.+-...++-.. ..++...++|++..+|-.-. +.+..+
T Consensus 122 ea~~~~hfTllgQaigsmIl~----~Eai~r----~~Pdi~IDtMGY~fs~-p~~r~l~~~~V~aYvHYP~iS~DML~~l 192 (465)
T KOG1387|consen 122 EASTWKHFTLLGQAIGSMILA----FEAIIR----FPPDIFIDTMGYPFSY-PIFRRLRRIPVVAYVHYPTISTDMLKKL 192 (465)
T ss_pred ecccccceehHHHHHHHHHHH----HHHHHh----CCchheEecCCCcchh-HHHHHHccCceEEEEecccccHHHHHHH
Confidence 555677664333333222222 222221 5699887553322111 12333568999999996422 222222
Q ss_pred H---hhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCC
Q 001492 347 L---KQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPR 423 (1067)
Q Consensus 347 ~---~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~r 423 (1067)
. ..|.+.+ ..-..|+++.++ -..+-..||.|++.|......+.++...+ .
T Consensus 193 ~qrq~s~~l~~-~KlaY~rlFa~l--Y~~~G~~ad~vm~NssWT~nHI~qiW~~~------------------------~ 245 (465)
T KOG1387|consen 193 FQRQKSGILVW-GKLAYWRLFALL--YQSAGSKADIVMTNSSWTNNHIKQIWQSN------------------------T 245 (465)
T ss_pred Hhhhhcchhhh-HHHHHHHHHHHH--HHhccccceEEEecchhhHHHHHHHhhcc------------------------c
Confidence 1 1222222 122334444433 45677889999998876666555544331 5
Q ss_pred EEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHH
Q 001492 424 MVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFG 503 (1067)
Q Consensus 424 v~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~ 503 (1067)
+.++.|..+++....... ....+.+.++++|.+.|.||.. +++.++
T Consensus 246 ~~iVyPPC~~e~lks~~~---------------------------------te~~r~~~ll~l~Q~RPEKnH~-~Lql~A 291 (465)
T KOG1387|consen 246 CSIVYPPCSTEDLKSKFG---------------------------------TEGERENQLLSLAQFRPEKNHK-ILQLFA 291 (465)
T ss_pred eeEEcCCCCHHHHHHHhc---------------------------------ccCCcceEEEEEeecCcccccH-HHHHHH
Confidence 677777777764332110 0124567899999999999998 555544
Q ss_pred hcccccCC----CcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEe
Q 001492 504 ECRPLREL----ANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFIN 578 (1067)
Q Consensus 504 ~l~~l~~~----~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ 578 (1067)
........ +++.| ++|+-...+ ..+.+..++.++..+++.++|.|...+|.+++..+|..| .+-|+
T Consensus 292 l~~~~~pl~a~~~~iKL~ivGScRnee-----D~ervk~Lkd~a~~L~i~~~v~F~~N~Py~~lv~lL~~a----~iGvh 362 (465)
T KOG1387|consen 292 LYLKNEPLEASVSPIKLIIVGSCRNEE-----DEERVKSLKDLAEELKIPKHVQFEKNVPYEKLVELLGKA----TIGVH 362 (465)
T ss_pred HHHhcCchhhccCCceEEEEeccCChh-----hHHHHHHHHHHHHhcCCccceEEEecCCHHHHHHHhccc----eeehh
Confidence 33222232 44555 777754332 245788999999999999999999999999999999999 89999
Q ss_pred cCCCCCCCHHHHHHHHcCCCEEEcCCCCc-hhhhccC---CceEEeCCCCHHHHHHHHHHhhc-CHHHHHHHHHHHHHHH
Q 001492 579 PALVEPFGLTLIEAAAHGLPMVATKNGGP-VDIHRAL---NNGLLVDPHDQQAIADALLKLVS-EKNLWVECRKNGWKNI 653 (1067)
Q Consensus 579 ps~~EgfgltllEAmA~G~PVVat~~Gg~-~eiv~~~---~~Gllv~p~d~~~la~aL~~ll~-d~~~~~~~~~~~~~~~ 653 (1067)
+-..|.||+.++||||+|+-+|+-+.||| -|||.+- .+|++.. +.++.|+++++++. +++.+..++++++..+
T Consensus 363 ~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~--t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~ 440 (465)
T KOG1387|consen 363 TMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP--TDEEYAEAILKIVKLNYDERNMMRRNARKSL 440 (465)
T ss_pred hhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC--ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998887 4676542 3699884 78899999999998 7777999999999999
Q ss_pred HcCCHHHHHHHHHHHHHHhHhc
Q 001492 654 HLFSWPEHCRTYLTRVAACRMR 675 (1067)
Q Consensus 654 ~~fsw~~~a~~~l~~~~~~~~~ 675 (1067)
.+|+-....+.|...+..++..
T Consensus 441 ~RFsE~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 441 ARFGELKFDKDWENPICKLLEE 462 (465)
T ss_pred HHhhHHHHHHhHhHHHHHhhcc
Confidence 9999999999999999888764
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.8e-17 Score=174.18 Aligned_cols=119 Identities=33% Similarity=0.480 Sum_probs=98.3
Q ss_pred EEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCC-CCH
Q 001492 485 ALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQ-YDV 562 (1067)
Q Consensus 485 ~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~-~dl 562 (1067)
++|++.+.||++.+++|+..+. ...+++.+ ++|.+.... .....+...+...+|.+.++++. +++
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~--~~~~~~~~~i~G~~~~~~-----------~~~~~~~~~~~~~~v~~~~~~~~~~~~ 175 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLK--ERGPDLKLVIAGDGPERE-----------YLEELLAALLLLDRVIFLGGLDPEELL 175 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHH--HhCCCeEEEEEeCCCChH-----------HHHHHHHhcCCcccEEEeCCCCcHHHH
Confidence 9999999999999999999995 34467776 778776422 22233566777889999999854 455
Q ss_pred HHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEe
Q 001492 563 PEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLV 620 (1067)
Q Consensus 563 ~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv 620 (1067)
..+++.| |++++|+..|+||++++|||+||+|||+|+.++..|++.++.+|++|
T Consensus 176 ~~~~~~~----di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 176 ALLLAAA----DVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHhhcC----CEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 5566658 99999999999999999999999999999999999999888999875
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.9e-17 Score=176.62 Aligned_cols=251 Identities=10% Similarity=0.105 Sum_probs=156.1
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||+++++.+.+.++++|++|+++| + .||+||||++.++..+++++++. +++||+||+.|+.+.
T Consensus 3 LIftDLDGTLLd~~~~~~~~a~~aL~~Lk~~G----I-~vVlaTGRt~~ev~~l~~~Lgl~----~p~I~eNGA~I~~p~ 73 (302)
T PRK12702 3 LVLSSLDGSLLDLEFNSYGAARQALAALERRS----I-PLVLYSLRTRAQLEHLCRQLRLE----HPFICEDGSAIYVPE 73 (302)
T ss_pred EEEEeCCCCCcCCCCcCCHHHHHHHHHHHHCC----C-EEEEEcCCCHHHHHHHHHHhCCC----CeEEEeCCcEEEEcc
Confidence 55569999999987888999999999999997 8 89999999999999999998874 489999999999874
Q ss_pred CCccc----CCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCccc----------c--cccCCceEE
Q 001492 859 TYTEE----GGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQE----------D--QKSSNAHCI 922 (1067)
Q Consensus 859 ~~~~~----~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~----------~--~~~~~~~ki 922 (1067)
..... ......+..|. +........++..+..+....... .....+....+ . ....+.|.-
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~--~~lg~~y~~ir~~L~~l~~~~~~~-f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SE 150 (302)
T PRK12702 74 HYFPAGILDEQWQHRPPYYV--CALGLPYPCLRHILQQVRQDSHLD-LIGFGDWTASELAAATGIPLEEAERAQKREYSE 150 (302)
T ss_pred ccccccccccccccCCCceE--EecCCCHHHHHHHHHHHHHHhCCC-ceehhhCCHHHHHHHhCcCHHHHHHHHhccCCc
Confidence 22100 00001112221 111122344555554443321110 00000000000 0 011233443
Q ss_pred EEEecCCCchHHHHHHHHHHHhcCCcEEEEEeeCCeeEEEec------------------C---CCCHHHHHHHHHHHhC
Q 001492 923 SYLIKDPSKARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVP------------------L---LASRSQALRYLFVRWR 981 (1067)
Q Consensus 923 ~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p------------------~---gasKg~AL~~L~~~~g 981 (1067)
.|...... . .+++.+.+.+.++ + .+++++.++. . +++||+|++.|.+.|.
T Consensus 151 p~~w~~~~-~----~~~~~~~~~g~~~--~--~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~ 221 (302)
T PRK12702 151 IFSYSGDP-A----RLREAFAQQEANL--T--QHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQ 221 (302)
T ss_pred ceEecCCH-H----HHHHHHHHcCCeE--E--ecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHH
Confidence 34432222 1 2266666655432 2 4445777776 5 8999999999999987
Q ss_pred CC--cccEEEEecCCCCCChhhhhcCCceEEEeCCCcccchhhhhcccCcCCCCC-CCCCCCceeecCcccHHHHHHHHH
Q 001492 982 LN--VANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIV-PSESPLIAHVNANAKVDEIANALR 1058 (1067)
Q Consensus 982 i~--~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~-~~~~~~~~~vt~~~~~dgI~~al~ 1058 (1067)
-. .=.+++ .|||.| | ++||+.+.++|++.|....... |..- ..+ |...+... .|......|=..++.
T Consensus 222 ~~~~~~~tia-LGDspN-D-~~mLe~~D~~vvi~~~~~~~~~-~~~~-----~l~~~~~~~~~~-~a~~~GP~GW~e~v~ 291 (302)
T PRK12702 222 RHLGPIKALG-IGCSPP-D-LAFLRWSEQKVVLPSPIADSLW-KEAL-----RLGGPEVQPQWQ-LAQLPGPEGWNEVVL 291 (302)
T ss_pred hccCCceEEE-ecCChh-h-HHHHHhCCeeEEecCCCCCCcc-cccc-----cccCcccCccce-ecCCCCcHHHHHHHH
Confidence 64 236788 999999 9 9999999999999887732210 0000 000 23444444 667888889888887
Q ss_pred hh
Q 001492 1059 QV 1060 (1067)
Q Consensus 1059 ~~ 1060 (1067)
++
T Consensus 292 ~~ 293 (302)
T PRK12702 292 MW 293 (302)
T ss_pred HH
Confidence 75
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.9e-16 Score=175.21 Aligned_cols=289 Identities=26% Similarity=0.304 Sum_probs=206.9
Q ss_pred ceEEEEcCCchhH---HHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEe
Q 001492 306 PYVIHGHYADAGD---SAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVIT 382 (1067)
Q Consensus 306 pDvIh~h~~~a~~---~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~ 382 (1067)
+|++|.+...... .........+.+.+...|........... . ........+.+ ... .......++.+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~-~~~--~~~~~~~~~~~~~ 156 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPR--L--LLLLGLLRLLL-KRL--KKALRLLADRVIA 156 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCccccccccc--c--hhhHHHHHHHH-HHH--HHhccccccEEEE
Confidence 5999988763322 34455566788999999987542210000 0 00000000101 111 1111225788888
Q ss_pred CCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCC
Q 001492 383 STKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPK 462 (1067)
Q Consensus 383 ~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1067)
.+..........+. . .++.++|++++...+.+...
T Consensus 157 ~~~~~~~~~~~~~~------------------~------~~~~~~~~~~~~~~~~~~~~--------------------- 191 (381)
T COG0438 157 VSPALKELLEALGV------------------P------NKIVVIPNGIDTEKFAPARI--------------------- 191 (381)
T ss_pred CCHHHHHHHHHhCC------------------C------CCceEecCCcCHHHcCcccc---------------------
Confidence 88765222211111 0 16889999999998765210
Q ss_pred CcchhhHhhhhhccCCC--CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCChhhhhccchHHHHHHH
Q 001492 463 AIPAIWSDVMRFLTNPH--KPMILALSRPDPKKNITTLLKAFGECRPLRELANLT-LIMGNRDDIEEMSSGNASVLITVL 539 (1067)
Q Consensus 463 ~~~~~~~~~~~~~~~~~--~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~-lIvG~~~~~~~l~~~~~~~~~~i~ 539 (1067)
...+. ...++++||+.+.||+..+++++..+.. ..++.. +++|.++.. ...+.
T Consensus 192 ------------~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~--~~~~~~~~~~g~~~~~----------~~~~~ 247 (381)
T COG0438 192 ------------GLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKK--RGPDIKLVIVGDGPER----------REELE 247 (381)
T ss_pred ------------CCCcccCceEEEEeeccChhcCHHHHHHHHHHhhh--hcCCeEEEEEcCCCcc----------HHHHH
Confidence 01122 3689999999999999999999999953 333344 478887642 13344
Q ss_pred HHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEE
Q 001492 540 KLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLL 619 (1067)
Q Consensus 540 ~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gll 619 (1067)
.++..+...+.|.|+|.++.+++..+|+.| +++++|+..|+||++++|||++|+|||+++.++..+++.++.+|++
T Consensus 248 ~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~----~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~ 323 (381)
T COG0438 248 KLAKKLGLEDNVKFLGYVPDEELAELLASA----DVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLL 323 (381)
T ss_pred HHHHHhCCCCcEEEecccCHHHHHHHHHhC----CEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEe
Confidence 477777777899999999878899999999 9999999999999999999999999999999999999988777888
Q ss_pred eCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHhHh
Q 001492 620 VDPHDQQAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYLTRVAACRM 674 (1067)
Q Consensus 620 v~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~~~ 674 (1067)
+.+.|.+++++++..++++++.++.+.+++++.+ ..|+|+..+..+.+.+..+..
T Consensus 324 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (381)
T COG0438 324 VPPGDVEELADALEQLLEDPELREELGEAARERVEEEFSWERIAEQLLELYEELLA 379 (381)
T ss_pred cCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 8877899999999999999988888888777777 599999999999999987654
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.73 E-value=8e-17 Score=176.10 Aligned_cols=221 Identities=10% Similarity=0.093 Sum_probs=137.2
Q ss_pred CeEEEEEEeCCCCCCC----C-chhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEc
Q 001492 775 RRLIVIALDCYDSKGA----P-DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 775 ~klllia~DiDGTLl~----~-~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
+++++ +|+||||.. | ...+++.++++|++|.++. ++ .|+|+|||++.++...+. ++ .=.++++
T Consensus 3 ~~~l~--lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~---~~-~v~ivSGR~~~~~~~~~~---~~---~~~l~g~ 70 (244)
T TIGR00685 3 KRAFF--FDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARP---HN-AIWIISGRKFLEKWLGVK---LP---GLGLAGE 70 (244)
T ss_pred cEEEE--EecCccccCCcCCCcccCCCHHHHHHHHHHHhCC---CC-eEEEEECCChhhccccCC---CC---ceeEEee
Confidence 35444 599999654 3 3457899999999999884 35 588999998777654432 21 1159999
Q ss_pred CCceEEecCCCcccCCcCCCC--hhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEec
Q 001492 850 SGGEMYYPGTYTEEGGKLFPD--PDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIK 927 (1067)
Q Consensus 850 nGa~I~~~~~~~~~~~~~~~d--~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~ 927 (1067)
+|++++..+.... ...... ..|.... ..+...+...+++..+.+ .++++||++
T Consensus 71 hG~~~~~~g~~~~--~~~~~~~~~~~~~~~------~~l~~~~~~~pG~~iE~K-----------------~~s~~~hyr 125 (244)
T TIGR00685 71 HGCEMKDNGSCQD--WVNLTEKIPSWKVRA------NELREEITTRPGVFIERK-----------------GVALAWHYR 125 (244)
T ss_pred cCEEEecCCCcce--eeechhhhhhHHHHH------HHHHHHHhcCCCcEEEec-----------------ceEEEEEec
Confidence 9999876321111 000000 1121111 112222222344444433 467888886
Q ss_pred CC-CchHH---HHHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhh
Q 001492 928 DP-SKARR---IDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELI 1003 (1067)
Q Consensus 928 ~~-~~~~~---~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML 1003 (1067)
.. +.... +.++...+... ..+.++ .+..++|+.|.++|||.|++.++++++++.+++++ |||+.| | ++||
T Consensus 126 ~a~d~~~~~~~~~~~~~~~~~~-~~~~v~--~g~~~~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~-iGD~~~-D-~~~~ 199 (244)
T TIGR00685 126 QAPVPELARFRAKELKEKILSF-TDLEVM--DGKAVVELKPRFVNKGEIVKRLLWHQPGSGISPVY-LGDDIT-D-EDAF 199 (244)
T ss_pred cCCCcHHHHHHHHHHHHHHhcC-CCEEEE--ECCeEEEEeeCCCCHHHHHHHHHHhcccCCCceEE-EcCCCc-H-HHHH
Confidence 54 21111 22333222221 234333 34458999999999999999999999999888888 999999 9 9999
Q ss_pred cCC--------ceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhh
Q 001492 1004 SGA--------HKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQV 1060 (1067)
Q Consensus 1004 ~~a--------g~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~ 1060 (1067)
+.+ +++|+|+... .+..| .|+.+ +.+++...|+.+
T Consensus 200 ~~~~~~~~~~g~~~v~v~~g~-----~~~~A---------------~~~~~--~~~~v~~~L~~l 242 (244)
T TIGR00685 200 RVVNNQWGNYGFYPVPIGSGS-----KKTVA---------------KFHLT--GPQQVLEFLGLL 242 (244)
T ss_pred HHHhcccCCCCeEEEEEecCC-----cCCCc---------------eEeCC--CHHHHHHHHHHH
Confidence 988 6899996222 22233 37765 445688887664
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.1e-16 Score=181.41 Aligned_cols=202 Identities=14% Similarity=0.196 Sum_probs=131.0
Q ss_pred EEEEeCCCCCC----CC-chhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCce
Q 001492 779 VIALDCYDSKG----AP-DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGE 853 (1067)
Q Consensus 779 lia~DiDGTLl----~~-~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~ 853 (1067)
++++|+||||. +| ...+++.++++|++|.+.. .++|+|||+...+.+++...++ ++++++|.+
T Consensus 121 ~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~~------~VAIVSGR~~~~L~~~l~~~~l------~laGsHG~e 188 (384)
T PLN02580 121 ALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKYF------PTAIISGRSRDKVYELVGLTEL------YYAGSHGMD 188 (384)
T ss_pred EEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhCC------CEEEEeCCCHHHHHHHhCCCCc------cEEEeCCce
Confidence 33359999964 34 4567899999999999874 6999999999999999976554 699999999
Q ss_pred EEecCCCccc----C--------C----cCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccC
Q 001492 854 MYYPGTYTEE----G--------G----KLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSS 917 (1067)
Q Consensus 854 I~~~~~~~~~----~--------~----~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (1067)
+..+...... . + .+.....|...+... .+.+.....+.++...+.|
T Consensus 189 ~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v--~~~l~e~~~~~pGs~VE~K---------------- 250 (384)
T PLN02580 189 IMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEV--FRSLVESTKDIKGAKVENH---------------- 250 (384)
T ss_pred eecCCCCcccccccccccccccccccccccccchhhhhhHHHH--HHHHHHHhccCCCCEEEec----------------
Confidence 8754211000 0 0 000011111111000 0112222333345555444
Q ss_pred CceEEEEEecCCCch---HHHHHHHHHHHhcCCcEEEEEeeCCeeEEEec-CCCCHHHHHHHHHHHhCCCccc-E-EEEe
Q 001492 918 NAHCISYLIKDPSKA---RRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVP-LLASRSQALRYLFVRWRLNVAN-M-FVIL 991 (1067)
Q Consensus 918 ~~~ki~~~~~~~~~~---~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p-~gasKg~AL~~L~~~~gi~~e~-v-va~f 991 (1067)
.+++++|++..... ...+++...+... ..+.++ .+.+++||.| .++|||.||++|++++|++..+ + .+||
T Consensus 251 -~~svavHYR~a~~~~~~~~~~~l~~~l~~~-~~l~v~--~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~i 326 (384)
T PLN02580 251 -KFCVSVHYRNVDEKNWPLVAQCVHDVLKKY-PRLRLT--HGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYI 326 (384)
T ss_pred -CcEEEEEeCCCCchHHHHHHHHHHHHHHhC-CceEEE--eCCeEEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEE
Confidence 57899999765422 1223333333322 224443 3335999999 5999999999999999998764 3 3459
Q ss_pred cCCCCCChhhhhcC-----CceEEEeCCCc
Q 001492 992 GESGDTDYEELISG-----AHKTLIMKGVV 1016 (1067)
Q Consensus 992 GDs~N~D~~eML~~-----ag~gVaMgNA~ 1016 (1067)
||+.| | ++||+. .|+||+|+|+.
T Consensus 327 GDD~T-D-edmF~~L~~~~~G~~I~Vgn~~ 354 (384)
T PLN02580 327 GDDRT-D-EDAFKVLREGNRGYGILVSSVP 354 (384)
T ss_pred CCCch-H-HHHHHhhhccCCceEEEEecCC
Confidence 99999 9 999995 59999999987
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.1e-16 Score=177.61 Aligned_cols=201 Identities=17% Similarity=0.168 Sum_probs=132.0
Q ss_pred EEEEEeCCCCCC----CCch-hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCc
Q 001492 778 IVIALDCYDSKG----APDK-KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGG 852 (1067)
Q Consensus 778 llia~DiDGTLl----~~~~-~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa 852 (1067)
++|++|+||||. ++++ .++++++++|++|. ++ + .|+|+|||++..+.+++.-.+ -++|++||+
T Consensus 112 ~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~----~-~vaIvSGR~~~~l~~~~~l~~------l~l~g~hGa 179 (366)
T PLN03017 112 IVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KC----F-PTAIVTGRCIDKVYNFVKLAE------LYYAGSHGM 179 (366)
T ss_pred eEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-cC----C-cEEEEeCCCHHHHHHhhcccC------ceEEEcCCc
Confidence 355579999987 4666 79999999999999 54 6 799999999999998854322 279999999
Q ss_pred eEEecCCCcccC---C---cCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEe
Q 001492 853 EMYYPGTYTEEG---G---KLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLI 926 (1067)
Q Consensus 853 ~I~~~~~~~~~~---~---~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~ 926 (1067)
++..+....... . .+.....|...+... ...+.....+.++...+.| .+++++|+
T Consensus 180 ~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v--~~~L~~~~~~~pGa~VE~K-----------------~~~vavHy 240 (366)
T PLN03017 180 DIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDEV--YRQLLEKTKSTPGAKVENH-----------------KFCASVHF 240 (366)
T ss_pred EEecCCCcceeccccccccccccchhhHHHHHHH--HHHHHHHHhcCCCCEEEec-----------------CcEEEEEc
Confidence 998754211100 0 011111232222100 1123333445566655554 57999999
Q ss_pred cCCCchHHHHHHHHHH----HhcCCcEEEEEeeCCeeEEEecC-CCCHHHHHHHHHHHhCCCc--ccEEEEecCCCCCCh
Q 001492 927 KDPSKARRIDDLRQKL----RMRGLRCHPMYCRNSTRMQIVPL-LASRSQALRYLFVRWRLNV--ANMFVILGESGDTDY 999 (1067)
Q Consensus 927 ~~~~~~~~~~el~~~L----~~~~~~~~v~~s~~~~~lEI~p~-gasKg~AL~~L~~~~gi~~--e~vva~fGDs~N~D~ 999 (1067)
+..... ...++...+ ... ..+.+ .++.+.+||.|. +.+||.|+++|++.++..- ..+++|+||+.+ |
T Consensus 241 R~ad~~-~~~~l~~~~~~vl~~~-~~l~v--~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~T-D- 314 (366)
T PLN03017 241 RCVDEK-KWSELVLQVRSVLKNF-PTLKL--TQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRT-D- 314 (366)
T ss_pred CcCCHH-HHHHHHHHHHHHHHhC-CCcEE--eCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCc-c-
Confidence 765421 223333333 222 12333 345569999995 9999999999999998763 345667999999 9
Q ss_pred hhhhcCC-----ceEEEeCCC
Q 001492 1000 EELISGA-----HKTLIMKGV 1015 (1067)
Q Consensus 1000 ~eML~~a-----g~gVaMgNA 1015 (1067)
++||+.+ |+||.+|..
T Consensus 315 EDaF~~L~~~~~G~gI~VG~~ 335 (366)
T PLN03017 315 EDAFKMLRDRGEGFGILVSKF 335 (366)
T ss_pred HHHHHHHhhcCCceEEEECCC
Confidence 9999955 678888864
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.3e-16 Score=185.19 Aligned_cols=273 Identities=15% Similarity=0.097 Sum_probs=175.0
Q ss_pred CCceEEEEcC-CchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEe
Q 001492 304 VWPYVIHGHY-ADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVIT 382 (1067)
Q Consensus 304 ~~pDvIh~h~-~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~ 382 (1067)
.+||+||+|. ...+..+++++..+|+|++++-+++-... ....++. + +.+++ ....||.+++
T Consensus 85 ~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~~s~~-----~~~~~~~-~------~~r~~-----~~~~ad~~~~ 147 (365)
T TIGR00236 85 EKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRTGD-----RYSPMPE-E------INRQL-----TGHIADLHFA 147 (365)
T ss_pred cCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCCCcCC-----CCCCCcc-H------HHHHH-----HHHHHHhccC
Confidence 6799999996 45677788888899999987655431000 0000000 0 11111 1234899999
Q ss_pred CCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCC-CCCCccCCCCCCccccccccccCCCCCCCC
Q 001492 383 STKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGM-DFSNVVAQEDTPEVDGELTSLIGGTDGSSP 461 (1067)
Q Consensus 383 ~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGi-D~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1067)
+|+...+.+.+. | .+..++.+++||+ |...+..... ..
T Consensus 148 ~s~~~~~~l~~~------------------G-----~~~~~I~vign~~~d~~~~~~~~~---~~--------------- 186 (365)
T TIGR00236 148 PTEQAKDNLLRE------------------N-----VKADSIFVTGNTVIDALLTNVEIA---YS--------------- 186 (365)
T ss_pred CCHHHHHHHHHc------------------C-----CCcccEEEeCChHHHHHHHHHhhc---cc---------------
Confidence 999887766432 2 2235899999996 4322211110 00
Q ss_pred CCcchhhHhhhhhccCCCCcEEEEEe-CC-CCCCCHHHHHHHHHhcccccCCCcEEEE-EecCCChhhhhccchHHHHHH
Q 001492 462 KAIPAIWSDVMRFLTNPHKPMILALS-RP-DPKKNITTLLKAFGECRPLRELANLTLI-MGNRDDIEEMSSGNASVLITV 538 (1067)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~Il~vg-Rl-d~~Kgi~~ll~A~~~l~~l~~~~~l~lI-vG~~~~~~~l~~~~~~~~~~i 538 (1067)
...+.++. .+++++++.+ |. ...||+..+++|+.++. ...+++.++ +|.+. .+ ....
T Consensus 187 ------~~~~~~~~--~~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~--~~~~~~~~vi~~~~~-~~--------~~~~- 246 (365)
T TIGR00236 187 ------SPVLSEFG--EDKRYILLTLHRRENVGEPLENIFKAIREIV--EEFEDVQIVYPVHLN-PV--------VREP- 246 (365)
T ss_pred ------hhHHHhcC--CCCCEEEEecCchhhhhhHHHHHHHHHHHHH--HHCCCCEEEEECCCC-hH--------HHHH-
Confidence 00112221 2345666665 43 24589999999999884 334555553 33321 11 1111
Q ss_pred HHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEc-CCCCchhhhccCCce
Q 001492 539 LKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVAT-KNGGPVDIHRALNNG 617 (1067)
Q Consensus 539 ~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat-~~Gg~~eiv~~~~~G 617 (1067)
+...++..++|.|.+.++..++..+|+.| |+++.+| |..++|||+||+|||++ +.|+..+++..+ .+
T Consensus 247 --~~~~~~~~~~v~~~~~~~~~~~~~~l~~a----d~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~ 314 (365)
T TIGR00236 247 --LHKHLGDSKRVHLIEPLEYLDFLNLAANS----HLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TN 314 (365)
T ss_pred --HHHHhCCCCCEEEECCCChHHHHHHHHhC----CEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ce
Confidence 22334556789999999888999999999 9998876 56689999999999996 678888888755 56
Q ss_pred EEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 001492 618 LLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLT 667 (1067)
Q Consensus 618 llv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~ 667 (1067)
+++ +.|+++++++|.+++++++.+++++++...+....+++++++.+.+
T Consensus 315 ~lv-~~d~~~i~~ai~~ll~~~~~~~~~~~~~~~~g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 315 KLV-GTDKENITKAAKRLLTDPDEYKKMSNASNPYGDGEASERIVEELLN 363 (365)
T ss_pred EEe-CCCHHHHHHHHHHHHhChHHHHHhhhcCCCCcCchHHHHHHHHHHh
Confidence 667 4799999999999999999888887665322234555555554443
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.9e-15 Score=171.64 Aligned_cols=238 Identities=13% Similarity=0.111 Sum_probs=160.7
Q ss_pred CCc-eEEEEcCCch-h--HHHHH--HHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccC
Q 001492 304 VWP-YVIHGHYADA-G--DSAAL--LSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAA 377 (1067)
Q Consensus 304 ~~p-DvIh~h~~~a-~--~~a~~--l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~A 377 (1067)
.+| |+||.|++.. + ....+ ..++.|+|+|+++|++++..... .+ ..+ ..|+..++.|
T Consensus 62 ~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~---~~------------~~~--~~~~~~~~~a 124 (333)
T PRK09814 62 LKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDS---NY------------YLM--KEEIDMLNLA 124 (333)
T ss_pred CCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccc---cc------------hhh--HHHHHHHHhC
Confidence 346 9999999732 2 11222 22344899999999986543210 00 011 2356678999
Q ss_pred CEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCC
Q 001492 378 ELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTD 457 (1067)
Q Consensus 378 d~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~ 457 (1067)
|.|||.|+.+.+.+.+ .|+ ...++.++++..+.....+..
T Consensus 125 D~iI~~S~~~~~~l~~------------------~g~-----~~~~i~~~~~~~~~~~~~~~~----------------- 164 (333)
T PRK09814 125 DVLIVHSKKMKDRLVE------------------EGL-----TTDKIIVQGIFDYLNDIELVK----------------- 164 (333)
T ss_pred CEEEECCHHHHHHHHH------------------cCC-----CcCceEecccccccccccccc-----------------
Confidence 9999999988876633 222 113677776554332111000
Q ss_pred CCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHH
Q 001492 458 GSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLI 536 (1067)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~ 536 (1067)
.....+.|+|+|++....++ .. ..+++.+ |+|+++..+
T Consensus 165 ------------------~~~~~~~i~yaG~l~k~~~l----~~--------~~~~~~l~i~G~g~~~~----------- 203 (333)
T PRK09814 165 ------------------TPSFQKKINFAGNLEKSPFL----KN--------WSQGIKLTVFGPNPEDL----------- 203 (333)
T ss_pred ------------------cccCCceEEEecChhhchHH----Hh--------cCCCCeEEEECCCcccc-----------
Confidence 01245689999999943321 11 1234444 889886421
Q ss_pred HHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecC-C----------CCCCCHHHHHHHHcCCCEEEcCCC
Q 001492 537 TVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPA-L----------VEPFGLTLIEAAAHGLPMVATKNG 605 (1067)
Q Consensus 537 ~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps-~----------~EgfgltllEAmA~G~PVVat~~G 605 (1067)
...++|.|.|+++.++++.+|+.. +.+++. . .-.+|.++.||||||+|||+++.|
T Consensus 204 ---------~~~~~V~f~G~~~~eel~~~l~~~-----~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~ 269 (333)
T PRK09814 204 ---------ENSANISYKGWFDPEELPNELSKG-----FGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKA 269 (333)
T ss_pred ---------ccCCCeEEecCCCHHHHHHHHhcC-----cCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCc
Confidence 234689999999999999999873 333322 1 135688899999999999999999
Q ss_pred CchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCC
Q 001492 606 GPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFS 657 (1067)
Q Consensus 606 g~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fs 657 (1067)
+..++|+++.+|++++ +.++++++|.++ .++.+++|++++++..+.+.
T Consensus 270 ~~~~~V~~~~~G~~v~--~~~el~~~l~~~--~~~~~~~m~~n~~~~~~~~~ 317 (333)
T PRK09814 270 AIADFIVENGLGFVVD--SLEELPEIIDNI--TEEEYQEMVENVKKISKLLR 317 (333)
T ss_pred cHHHHHHhCCceEEeC--CHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999997 788999999985 35778899999998875443
|
|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.71 E-value=8.9e-16 Score=185.72 Aligned_cols=337 Identities=15% Similarity=0.137 Sum_probs=219.6
Q ss_pred CCceEEEEcCCchhHHHHHHHhc--------------CCCcEEEEeCCCchhhH---H-HHHh---------hCCCChhh
Q 001492 304 VWPYVIHGHYADAGDSAALLSGA--------------LNVPMVLTGHSLGRNKL---E-QLLK---------QGRQSKED 356 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~~--------------~giP~V~t~H~l~~~~~---~-~l~~---------~g~~~~~~ 356 (1067)
.+|||||+|.+-++.+...+.+. ....+|+|.|++.+.-. . .++. .| ++...
T Consensus 160 ~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~~~g-l~~~~ 238 (601)
T TIGR02094 160 IDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAANLG-LPREQ 238 (601)
T ss_pred CCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhhHhC-CCHHH
Confidence 47999999999777776664221 13678999999855332 1 1111 01 11111
Q ss_pred hhhHhHHH----HhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCC
Q 001492 357 INSTYKIM----RRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMD 432 (1067)
Q Consensus 357 i~~~y~~~----~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD 432 (1067)
+....... ..+..-+.++..|+.|.++|+...+-..+....+.+. ... ...++.-|-||||
T Consensus 239 ~~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l~~~------------~~~---~~~~i~gItNGId 303 (601)
T TIGR02094 239 LLALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFLYPG------------YEE---EEVPIGYVTNGVH 303 (601)
T ss_pred HHhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhhhhh------------ccc---ccCCccceeCCcc
Confidence 11000000 1234457789999999999998776332222211110 000 0125888999999
Q ss_pred CCCccCCCCCCccccccccccCCCC----C--------CCCCCcchhhH-------hhhh--------------------
Q 001492 433 FSNVVAQEDTPEVDGELTSLIGGTD----G--------SSPKAIPAIWS-------DVMR-------------------- 473 (1067)
Q Consensus 433 ~~~f~~~~~~~~~~~~~~~~~~~~~----~--------~~~~~~~~~~~-------~~~~-------------------- 473 (1067)
+..+.+... ..+-..+-+.+ . -...++...|+ .+.+
T Consensus 304 ~~~W~~~~~-----~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~ 378 (601)
T TIGR02094 304 NPTWVAPEL-----RDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAIL 378 (601)
T ss_pred ccccCCHHH-----HHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhh
Confidence 998875431 11111000000 0 00000001111 1111
Q ss_pred ----hccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccC---CCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcC
Q 001492 474 ----FLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRE---LANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYD 546 (1067)
Q Consensus 474 ----~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~---~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~ 546 (1067)
....++.++|++++|+...||.++++.++.++.++.. .|-..+++|.++..+.+ ..++...+..+.++..
T Consensus 379 ~~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~---gk~~i~~i~~la~~~~ 455 (601)
T TIGR02094 379 MATDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGE---GKEIIQRIVEFSKRPE 455 (601)
T ss_pred hhhccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccch---HHHHHHHHHHHHhccc
Confidence 1145788999999999999999999999988854322 33333477777533222 2456777888887755
Q ss_pred CCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEe-cCC-CCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCC--
Q 001492 547 LYGQVAYPKHHKQYDVPEIYRLAAKTKGVFIN-PAL-VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDP-- 622 (1067)
Q Consensus 547 l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~-ps~-~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p-- 622 (1067)
..++|.|.-..+.+--..+|+.| |++++ |+. +|++|++-+=||..|.+.+++..|...|.. ++.||+.+.+
T Consensus 456 ~~~kv~f~~~Yd~~lA~~i~aG~----Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~ 530 (601)
T TIGR02094 456 FRGRIVFLENYDINLARYLVSGV----DVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGE 530 (601)
T ss_pred CCCCEEEEcCCCHHHHHHHhhhh----eeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCc
Confidence 67789987665544455567777 99999 888 999999999999999999999999998876 5689999984
Q ss_pred ----------CCHHHHHHHHHHhh-----cC-----HHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHH
Q 001492 623 ----------HDQQAIADALLKLV-----SE-----KNLWVECRKNGWKNI-HLFSWPEHCRTYLTRV 669 (1067)
Q Consensus 623 ----------~d~~~la~aL~~ll-----~d-----~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~ 669 (1067)
.|.++|-++|.+.+ ++ |..|.++.+++++.. ..|||.+++++|.+.|
T Consensus 531 ~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 531 EYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred cccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 78999999997766 23 667999999999886 5899999999999987
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.68 E-value=7.8e-15 Score=171.16 Aligned_cols=172 Identities=15% Similarity=0.094 Sum_probs=117.0
Q ss_pred hhccCCCCcEEEE-Ee-CCCCC-CCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhc-CC
Q 001492 473 RFLTNPHKPMILA-LS-RPDPK-KNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKY-DL 547 (1067)
Q Consensus 473 ~~~~~~~~~~Il~-vg-Rld~~-Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~-~l 547 (1067)
.+..++++++|+. .| |.... ++++.+++|+..+. +..+++.+ ++|+.+. ...++.+++.++ ++
T Consensus 179 ~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~--~~~~~~~~ii~~~~~~----------~~~~~~~~~~~~~~~ 246 (380)
T PRK00025 179 RLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQ--QRYPDLRFVLPLVNPK----------RREQIEEALAEYAGL 246 (380)
T ss_pred HcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH--HhCCCeEEEEecCChh----------hHHHHHHHHhhcCCC
Confidence 3444556666544 34 44443 45789999999884 34466665 4444221 123445555555 44
Q ss_pred CCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEc-----------------CCCCchhh
Q 001492 548 YGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVAT-----------------KNGGPVDI 610 (1067)
Q Consensus 548 ~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat-----------------~~Gg~~ei 610 (1067)
. +.+. ..++..+|+.| |++|.+| |.+.+|||++|+|+|++ +.++..++
T Consensus 247 ~--v~~~----~~~~~~~~~~a----Dl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~ 311 (380)
T PRK00025 247 E--VTLL----DGQKREAMAAA----DAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNL 311 (380)
T ss_pred C--eEEE----cccHHHHHHhC----CEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHH
Confidence 3 4443 25899999999 9999987 88888999999999987 45666777
Q ss_pred hccCC--ceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Q 001492 611 HRALN--NGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 611 v~~~~--~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~ 672 (1067)
+.++. .+++.+..|+++++++|.++++|++.+++|++++.+..+.. -...+++..+.+.+.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~~ 374 (380)
T PRK00025 312 LAGRELVPELLQEEATPEKLARALLPLLADGARRQALLEGFTELHQQL-RCGADERAAQAVLEL 374 (380)
T ss_pred hcCCCcchhhcCCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHH
Confidence 76653 45777888999999999999999999999999876555432 222444444544443
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.5e-13 Score=147.82 Aligned_cols=380 Identities=18% Similarity=0.138 Sum_probs=235.5
Q ss_pred HHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCcccccccch
Q 001492 196 YVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKELLWPY 275 (1067)
Q Consensus 196 yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~ 275 (1067)
.+..=|..|++.| ++|+++.-..+-| -| ++-..+.++|+.++..|...+.++..
T Consensus 28 RMqYHA~Sla~~g--f~VdliGy~~s~p---------~e-----------~l~~hprI~ih~m~~l~~~~~~p~~~---- 81 (444)
T KOG2941|consen 28 RMQYHALSLAKLG--FQVDLIGYVESIP---------LE-----------ELLNHPRIRIHGMPNLPFLQGGPRVL---- 81 (444)
T ss_pred HHHHHHHHHHHcC--CeEEEEEecCCCC---------hH-----------HHhcCCceEEEeCCCCcccCCCchhh----
Confidence 4555688999999 9999997643222 11 12336789999998655432222211
Q ss_pred hHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc---hhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCC
Q 001492 276 IQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD---AGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQ 352 (1067)
Q Consensus 276 l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~---a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~ 352 (1067)
...-.++.....+..+|.. -..||+|..+.+. .-.++.+.+...|.++|+..|+++.. +..-+..|..
T Consensus 82 --~l~lKvf~Qfl~Ll~aL~~------~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ys-l~l~~~~g~~ 152 (444)
T KOG2941|consen 82 --FLPLKVFWQFLSLLWALFV------LRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYS-LQLKLKLGFQ 152 (444)
T ss_pred --hhHHHHHHHHHHHHHHHHh------ccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHH-HHHHhhcCCC
Confidence 1111122211222222222 1359999999873 34455556677899999999999876 2212233332
Q ss_pred ChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCC
Q 001492 353 SKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMD 432 (1067)
Q Consensus 353 ~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD 432 (1067)
...-++.++. |+..-+.|+.-+|+|+.+.+++.+..+-. +-..+|.+|.. -|..+|
T Consensus 153 -----h~lV~l~~~~--E~~fgk~a~~nLcVT~AMr~dL~qnWgi~-------------ra~v~YDrPps----~~~~l~ 208 (444)
T KOG2941|consen 153 -----HPLVRLVRWL--EKYFGKLADYNLCVTKAMREDLIQNWGIN-------------RAKVLYDRPPS----KPTPLD 208 (444)
T ss_pred -----CchHHHHHHH--HHHhhcccccchhhHHHHHHHHHHhcCCc-------------eeEEEecCCCC----CCCchh
Confidence 2234455554 77888999999999999888775543310 00112222221 011111
Q ss_pred CCC--ccCCCC-CCccccccccccCCCCCCCCCCcchhhHhhhhh------ccCCCCcEEEEEeCCCCCCCHHHHHHHHH
Q 001492 433 FSN--VVAQED-TPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRF------LTNPHKPMILALSRPDPKKNITTLLKAFG 503 (1067)
Q Consensus 433 ~~~--f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Il~vgRld~~Kgi~~ll~A~~ 503 (1067)
..+ |.+... ....++...+ .+.-. ......++ .......++++.....|..++..|++|+.
T Consensus 209 ~~H~lf~~l~~d~~~f~ar~~q--------~~~~~--~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~ 278 (444)
T KOG2941|consen 209 EQHELFMKLAGDHSPFRAREPQ--------DKALE--RTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALV 278 (444)
T ss_pred HHHHHHhhhccccchhhhcccc--------cchhh--hhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHH
Confidence 111 221110 0000000000 00000 00111111 12223345677777999999999999998
Q ss_pred hc-----ccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEE
Q 001492 504 EC-----RPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFI 577 (1067)
Q Consensus 504 ~l-----~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v 577 (1067)
.. ..-...|.+.. |.|.||.. +.+.+.+.++++...-.-..++.-+|.|.+++.|+ .+|++
T Consensus 279 ~y~~~~~~~~~~lP~llciITGKGPlk-----------E~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saD--lGVcL 345 (444)
T KOG2941|consen 279 IYEEQLYDKTHNLPSLLCIITGKGPLK-----------EKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASAD--LGVCL 345 (444)
T ss_pred hhhhhhhhccCCCCcEEEEEcCCCchh-----------HHHHHHHHHhcccceeeeecccccccchhHhhccc--cceEe
Confidence 33 22234577664 67878754 44557788888876555588999999999999993 35667
Q ss_pred ecCCC-CCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhc----CHHHHHHHHHHHHHH
Q 001492 578 NPALV-EPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVS----EKNLWVECRKNGWKN 652 (1067)
Q Consensus 578 ~ps~~-EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~----d~~~~~~~~~~~~~~ 652 (1067)
.+|.. =-.|++++....||+||+|-+.....|+|+++.||++|+ |.+++|+.|.-+++ +.+...++.++.++.
T Consensus 346 HtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~ 423 (444)
T KOG2941|consen 346 HTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELNQLKKNLREE 423 (444)
T ss_pred eecCcccCcchhHHHhhcCCCceeeecchhHHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH
Confidence 77653 346889999999999999999999999999999999995 89999999999999 888889999988887
Q ss_pred HHcCCHHH
Q 001492 653 IHLFSWPE 660 (1067)
Q Consensus 653 ~~~fsw~~ 660 (1067)
+.+.|+.
T Consensus 424 -~e~RW~~ 430 (444)
T KOG2941|consen 424 -QELRWDE 430 (444)
T ss_pred -HhhhHHH
Confidence 4455544
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.4e-15 Score=170.63 Aligned_cols=251 Identities=17% Similarity=0.127 Sum_probs=164.2
Q ss_pred CCceEEEEcCC-chhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEe
Q 001492 304 VWPYVIHGHYA-DAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVIT 382 (1067)
Q Consensus 304 ~~pDvIh~h~~-~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~ 382 (1067)
.+||+||+|.. .....++.+++..|+|++++.|+..... .+.. . ...++ ...+.+|.+++
T Consensus 87 ~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~------~~~~-~-------~~~r~-----~~~~~ad~~~~ 147 (363)
T cd03786 87 EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFD------RGMP-D-------EENRH-----AIDKLSDLHFA 147 (363)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCC------CCCC-c-------hHHHH-----HHHHHhhhccC
Confidence 46999999964 4556677788888999998777532100 0110 0 01111 13467899999
Q ss_pred CCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCC-CCCCccCCCCCCccccccccccCCCCCCCC
Q 001492 383 STKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGM-DFSNVVAQEDTPEVDGELTSLIGGTDGSSP 461 (1067)
Q Consensus 383 ~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGi-D~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1067)
+|+...+.+.+ .| .+..++.+++|++ |...+.+... . ..
T Consensus 148 ~s~~~~~~l~~------------------~G-----~~~~kI~vign~v~d~~~~~~~~~-~---~~------------- 187 (363)
T cd03786 148 PTEEARRNLLQ------------------EG-----EPPERIFVVGNTMIDALLRLLELA-K---KE------------- 187 (363)
T ss_pred CCHHHHHHHHH------------------cC-----CCcccEEEECchHHHHHHHHHHhh-c---cc-------------
Confidence 99987766532 22 2335899999985 5433221110 0 00
Q ss_pred CCcchhhHhhhhhccCCCCcEEEEEeCCCC---CCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHH
Q 001492 462 KAIPAIWSDVMRFLTNPHKPMILALSRPDP---KKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITV 538 (1067)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~Il~vgRld~---~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i 538 (1067)
..+..+..++...++++.+|+.. .||+..+++|+..+.. . ++.+++++.+. ....+
T Consensus 188 -------~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~--~--~~~vi~~~~~~----------~~~~l 246 (363)
T cd03786 188 -------LILELLGLLPKKYILVTLHRVENVDDGEQLEEILEALAELAE--E--DVPVVFPNHPR----------TRPRI 246 (363)
T ss_pred -------hhhhhcccCCCCEEEEEeCCccccCChHHHHHHHHHHHHHHh--c--CCEEEEECCCC----------hHHHH
Confidence 00112223334456778888874 7999999999998842 1 45555443321 12345
Q ss_pred HHHHHhcCC-CCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCC-CCchhhhccCCc
Q 001492 539 LKLIDKYDL-YGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKN-GGPVDIHRALNN 616 (1067)
Q Consensus 539 ~~l~~~~~l-~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~-Gg~~eiv~~~~~ 616 (1067)
.+.+.++++ .++|.|.+....++++.+|+.| |++|.+|- | +..|||++|+|||++.. +...+.+++
T Consensus 247 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~a----d~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~--- 314 (363)
T cd03786 247 REAGLEFLGHHPNVLLISPLGYLYFLLLLKNA----DLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVES--- 314 (363)
T ss_pred HHHHHhhccCCCCEEEECCcCHHHHHHHHHcC----cEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhhe---
Confidence 556666665 5789999988888999999999 99999984 4 47899999999999975 445666653
Q ss_pred eEEeCC-CCHHHHHHHHHHhhcCHHHHHHHH
Q 001492 617 GLLVDP-HDQQAIADALLKLVSEKNLWVECR 646 (1067)
Q Consensus 617 Gllv~p-~d~~~la~aL~~ll~d~~~~~~~~ 646 (1067)
|+.+.. .|+++++++|.++++++..+..++
T Consensus 315 g~~~~~~~~~~~i~~~i~~ll~~~~~~~~~~ 345 (363)
T cd03786 315 GTNVLVGTDPEAILAAIEKLLSDEFAYSLMS 345 (363)
T ss_pred eeEEecCCCHHHHHHHHHHHhcCchhhhcCC
Confidence 443333 379999999999999988766653
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.3e-14 Score=166.88 Aligned_cols=328 Identities=20% Similarity=0.235 Sum_probs=188.5
Q ss_pred CceEEEEcCCchhHHHHHHHhc-CCCcEEEEeCCCchhhHHHHHhhC--------CCChhhhhhHhHHHHhHHHhhcccc
Q 001492 305 WPYVIHGHYADAGDSAALLSGA-LNVPMVLTGHSLGRNKLEQLLKQG--------RQSKEDINSTYKIMRRIEGEELSLD 375 (1067)
Q Consensus 305 ~pDvIh~h~~~a~~~a~~l~~~-~giP~V~t~H~l~~~~~~~l~~~g--------~~~~~~i~~~y~~~~ri~~E~~~l~ 375 (1067)
..-|.|+|-|++|....++.+. ..|.+|||.|..-.... +...+ .+..+.....+.+..+...|+.+..
T Consensus 143 ~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~--l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~ 220 (633)
T PF05693_consen 143 PKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRY--LAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAH 220 (633)
T ss_dssp EEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHH--HTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHH
T ss_pred CcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhhH--hhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHH
Confidence 3568899999887777666553 46888999998632221 11111 1123334455667778888999999
Q ss_pred cCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCC
Q 001492 376 AAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGG 455 (1067)
Q Consensus 376 ~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~ 455 (1067)
.||.+.++|+-...+...+++.. .=.|+|||++.+.|.... +.+.+.
T Consensus 221 ~AdvFTTVSeITa~Ea~~LL~r~------------------------pDvV~pNGl~v~~~~~~~-------efqnl~-- 267 (633)
T PF05693_consen 221 YADVFTTVSEITAKEAEHLLKRK------------------------PDVVTPNGLNVDKFPALH-------EFQNLH-- 267 (633)
T ss_dssp HSSEEEESSHHHHHHHHHHHSS--------------------------SEE----B-GGGTSSTT-------HHHHHH--
T ss_pred hcCeeeehhhhHHHHHHHHhCCC------------------------CCEEcCCCccccccccch-------HHHHHH--
Confidence 99999999998888776655431 127889999998876443 111100
Q ss_pred CCCCCCCCcchhhHhhhh-hcc----CCC-CcEEEEEeCCCC-CCCHHHHHHHHHhcccc-c-CCCc---EEE-EEecC-
Q 001492 456 TDGSSPKAIPAIWSDVMR-FLT----NPH-KPMILALSRPDP-KKNITTLLKAFGECRPL-R-ELAN---LTL-IMGNR- 521 (1067)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~-~~~----~~~-~~~Il~vgRld~-~Kgi~~ll~A~~~l~~l-~-~~~~---l~l-IvG~~- 521 (1067)
......+....+. |.. +++ ..+|...||.+. .||++.+|+|+.++... + ...+ +.+ |++..
T Consensus 268 -----~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~ 342 (633)
T PF05693_consen 268 -----AKAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKT 342 (633)
T ss_dssp -----HHHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SE
T ss_pred -----HHHHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCcc
Confidence 0001122333332 211 223 456788899985 79999999999998532 1 1112 223 44322
Q ss_pred --CChhhhh---------ccchHHH-------------------------------------------------------
Q 001492 522 --DDIEEMS---------SGNASVL------------------------------------------------------- 535 (1067)
Q Consensus 522 --~~~~~l~---------~~~~~~~------------------------------------------------------- 535 (1067)
-..+.++ ....++.
T Consensus 343 ~~~~ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~ 422 (633)
T PF05693_consen 343 NSFNVESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDS 422 (633)
T ss_dssp EEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTT
T ss_pred CCcCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCc
Confidence 1111111 1111000
Q ss_pred -HHHHHHHHhcCCCC------cEEe-CCCCCCC------CHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEE
Q 001492 536 -ITVLKLIDKYDLYG------QVAY-PKHHKQY------DVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVA 601 (1067)
Q Consensus 536 -~~i~~l~~~~~l~~------~V~~-~g~~~~~------dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVa 601 (1067)
..|...+.++++.+ +|.| |-+++.. +..++++.| |+.|+||.+||||.|.+|+.|+|+|.|.
T Consensus 423 ~DpILn~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~Gc----dLgvFPSYYEPWGYTPlE~~a~gVPsIT 498 (633)
T PF05693_consen 423 NDPILNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGC----DLGVFPSYYEPWGYTPLECTAFGVPSIT 498 (633)
T ss_dssp T-HHHHHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHS----SEEEE--SSBSS-HHHHHHHHTT--EEE
T ss_pred cCHHHHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccC----ceeeeccccccccCChHHHhhcCCceee
Confidence 11444444444432 2444 3344333 688999999 9999999999999999999999999999
Q ss_pred cCCCCchhhhcc-----CCceEEe-C--CCCHHH----HHHHHHHhhc-CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 001492 602 TKNGGPVDIHRA-----LNNGLLV-D--PHDQQA----IADALLKLVS-EKNLWVECRKNGWKNIHLFSWPEHCRTYLTR 668 (1067)
Q Consensus 602 t~~Gg~~eiv~~-----~~~Gllv-~--p~d~~~----la~aL~~ll~-d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~ 668 (1067)
|+..|+...+.+ ...|+.| + -.+.++ |++.|.+... ++..+..+++++.+.....+|......|.+.
T Consensus 499 TnLsGFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~A 578 (633)
T PF05693_consen 499 TNLSGFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKA 578 (633)
T ss_dssp ETTBHHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHH
T ss_pred ccchhHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999888765543 3457765 2 234555 4555555544 5566777787777766899999999999999
Q ss_pred HHHhHhcC
Q 001492 669 VAACRMRH 676 (1067)
Q Consensus 669 ~~~~~~~~ 676 (1067)
|...+.+.
T Consensus 579 y~~AL~~a 586 (633)
T PF05693_consen 579 YDLALRRA 586 (633)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99888763
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.63 E-value=7.9e-15 Score=164.49 Aligned_cols=201 Identities=14% Similarity=0.163 Sum_probs=130.4
Q ss_pred EEEEeCCCCCC----CCch-hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCce
Q 001492 779 VIALDCYDSKG----APDK-KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGE 853 (1067)
Q Consensus 779 lia~DiDGTLl----~~~~-~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~ 853 (1067)
++++|+||||. +|+. .+++.++++|++|.+. . .|+|+|||++..+..++.-.++ ++++++|.+
T Consensus 100 ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~~-----~-~vaIvSGR~~~~l~~~~~~~~l------~laGsHG~e 167 (354)
T PLN02151 100 VMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAKC-----F-PTAIVSGRCREKVSSFVKLTEL------YYAGSHGMD 167 (354)
T ss_pred EEEEecCccCCCCCCCcccccCCHHHHHHHHHHhcC-----C-CEEEEECCCHHHHHHHcCCccc------eEEEeCCce
Confidence 44469999987 6755 7899999999999954 4 6999999999999999865443 689999999
Q ss_pred EEecCCCcc-c-C---CcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecC
Q 001492 854 MYYPGTYTE-E-G---GKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKD 928 (1067)
Q Consensus 854 I~~~~~~~~-~-~---~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~ 928 (1067)
+..+..... . . .....+..|...+... ...+.....+.++...+.| .+++++|++.
T Consensus 168 ~~~p~~g~~~~~~~~~~~~~~~~~~~~~i~~v--~~~l~~~~~~~pG~~VE~K-----------------~~slavHYR~ 228 (354)
T PLN02151 168 IKGPEQGSKYKKENQSLLCQPATEFLPVINEV--YKKLVEKTKSIPGAKVENN-----------------KFCASVHFRC 228 (354)
T ss_pred eecCCCCccccccccccccccchhhHHHHHHH--HHHHHHHHhcCCCCEEEec-----------------CcEEEEEeCC
Confidence 876531110 0 0 0011122333222100 1112222344566666554 5789999976
Q ss_pred CCchHHHHHHHHHHHhc---CCcEEEEEeeCCeeEEEecC-CCCHHHHHHHHHHHhCCCcc--cEEEEecCCCCCChhhh
Q 001492 929 PSKARRIDDLRQKLRMR---GLRCHPMYCRNSTRMQIVPL-LASRSQALRYLFVRWRLNVA--NMFVILGESGDTDYEEL 1002 (1067)
Q Consensus 929 ~~~~~~~~el~~~L~~~---~~~~~v~~s~~~~~lEI~p~-gasKg~AL~~L~~~~gi~~e--~vva~fGDs~N~D~~eM 1002 (1067)
.... ...++...+... ...+.+ .++.+.+||.|. +++||.|+++|++.++..-. .+++|+||+.+ | ++|
T Consensus 229 a~~~-~~~~l~~~l~~v~~~~~~l~v--~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~T-D-EDa 303 (354)
T PLN02151 229 VEEN-KWSDLANQVRSVLKNYPKLML--TQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRT-D-EDA 303 (354)
T ss_pred CChH-HHHHHHHHHHHHHhhCCCcEE--ecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCc-H-HHH
Confidence 5432 123333333221 112333 345569999995 99999999999999886532 35667999999 9 999
Q ss_pred hcCC-----ceEEEeCCC
Q 001492 1003 ISGA-----HKTLIMKGV 1015 (1067)
Q Consensus 1003 L~~a-----g~gVaMgNA 1015 (1067)
|+.+ |.||.++..
T Consensus 304 F~~L~~~~~G~gI~Vg~~ 321 (354)
T PLN02151 304 FKILRDKKQGLGILVSKY 321 (354)
T ss_pred HHHHhhcCCCccEEeccC
Confidence 9854 677777643
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.1e-14 Score=154.16 Aligned_cols=196 Identities=13% Similarity=0.138 Sum_probs=137.3
Q ss_pred cCCeEEEEEEeCCCCCCC----C-chhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEE
Q 001492 773 RRRRLIVIALDCYDSKGA----P-DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALI 847 (1067)
Q Consensus 773 ~r~klllia~DiDGTLl~----~-~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I 847 (1067)
.+++++|+ |+||||.. | ...++++++++|+.|.++. +. .++|+|||+..++..++.-.++ ++|
T Consensus 16 a~~~~~~l--DyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~---~~-~v~iiSGR~~~~l~~~~~v~~i------~l~ 83 (266)
T COG1877 16 ARKRLLFL--DYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDP---RN-VVAIISGRSLAELERLFGVPGI------GLI 83 (266)
T ss_pred ccceEEEE--eccccccccccCccccCCCHHHHHHHHHHHhcC---CC-eEEEEeCCCHHHHHHhcCCCCc------cEE
Confidence 34487777 88888543 4 3446789999999999995 34 4999999999999999985555 599
Q ss_pred EcCCceEEecCCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEec
Q 001492 848 CSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIK 927 (1067)
Q Consensus 848 ~~nGa~I~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~ 927 (1067)
|+||+++..+.+..........+..|...+ ...++.++.++|+++.+.| .+.++||++
T Consensus 84 aehGa~~r~~~g~~~~~~~~~~~~~~~~~v-----~~~l~~~v~r~pGs~iE~K-----------------~~a~~~Hyr 141 (266)
T COG1877 84 AEHGAEVRDPNGKWWINLAEEADLRWLKEV-----AAILEYYVERTPGSYIERK-----------------GFAVALHYR 141 (266)
T ss_pred EecceEEecCCCCeeEecCHHHHhhHHHHH-----HHHHHHHhhcCCCeEEEEc-----------------CcEEEEeec
Confidence 999999965532222111122233454555 4677888999999888876 467888987
Q ss_pred CCCchHH-HHHHHHHHHhcCCc-EEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcC
Q 001492 928 DPSKARR-IDDLRQKLRMRGLR-CHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISG 1005 (1067)
Q Consensus 928 ~~~~~~~-~~el~~~L~~~~~~-~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ 1005 (1067)
+...... ...+.+........ ++++. +...+|+.|.++|||.++++++++...+- .+++|.||+.+ | ++||+.
T Consensus 142 ~a~~~~~~~~a~~~~~~~~~~~~~~v~~--gk~vVEvrp~~~~KG~a~~~i~~~~~~~~-~~~~~aGDD~T-D-E~~F~~ 216 (266)
T COG1877 142 NAEDDEGAALALAEAATLINELKLRVTP--GKMVVELRPPGVSKGAAIKYIMDELPFDG-RFPIFAGDDLT-D-EDAFAA 216 (266)
T ss_pred cCCchhhHHHHHHHHHhccccccEEEEe--CceEEEEeeCCcchHHHHHHHHhcCCCCC-CcceecCCCCc-c-HHHHHh
Confidence 6553221 22233333222222 44433 33489999999999999999999887664 34555999999 9 999998
Q ss_pred Cc
Q 001492 1006 AH 1007 (1067)
Q Consensus 1006 ag 1007 (1067)
+.
T Consensus 217 v~ 218 (266)
T COG1877 217 VN 218 (266)
T ss_pred hc
Confidence 86
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.56 E-value=7.9e-14 Score=167.03 Aligned_cols=166 Identities=13% Similarity=0.162 Sum_probs=141.9
Q ss_pred EEEEEe--CCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCC----------
Q 001492 482 MILALS--RPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLY---------- 548 (1067)
Q Consensus 482 ~Il~vg--Rld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~---------- 548 (1067)
.+++++ |+ +.|.++.+|+|+..+. ...|++.| +.|-+.+ ++ ....++++++++++.
T Consensus 321 ~~I~v~idrL-~ek~~~~~I~av~~~~--~~~p~~~L~~~gy~~~-~~-------~~~~l~~~i~~~~~~~~~~~~~~~~ 389 (519)
T TIGR03713 321 TEIGFWIDGL-SDEELQQILQQLLQYI--LKNPDYELKILTYNND-ND-------ITQLLEDILEQINEEYNQDKNFFSL 389 (519)
T ss_pred eEEEEEcCCC-ChHHHHHHHHHHHHHH--hhCCCeEEEEEEecCc-hh-------HHHHHHHHHHHHHhhhchhhhcccc
Confidence 455555 99 9999999999999984 57788888 5676542 11 133444555555444
Q ss_pred -------------------CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchh
Q 001492 549 -------------------GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVD 609 (1067)
Q Consensus 549 -------------------~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~e 609 (1067)
..|.|.|.++..++...|..| .++|.+|..|+|+ +++||+++|+|+| +-|+.+
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~a----rl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~ 461 (519)
T TIGR03713 390 SEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKL----RLIIDLSKEPDLY-TQISGISAGIPQI---NKVETD 461 (519)
T ss_pred chhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhh----eEEEECCCCCChH-HHHHHHHcCCCee---ecCCce
Confidence 689999998777999999999 9999999999999 9999999999999 667799
Q ss_pred hhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 001492 610 IHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTR 668 (1067)
Q Consensus 610 iv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~ 668 (1067)
+|.++.||+|| +|..+|+++|..+|.+++.|+++...+.+.++.||-+.+.++|.+.
T Consensus 462 ~V~d~~NG~li--~d~~~l~~al~~~L~~~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 462 YVEHNKNGYII--DDISELLKALDYYLDNLKNWNYSLAYSIKLIDDYSSENIIERLNEL 518 (519)
T ss_pred eeEcCCCcEEe--CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHhh
Confidence 99999999999 6999999999999999999999999999999999999999888764
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=99.55 E-value=6.5e-13 Score=163.52 Aligned_cols=336 Identities=18% Similarity=0.214 Sum_probs=219.9
Q ss_pred CCceEEEEcCCchhHHHH-----HHHhc----------CCCcEEEEeCCCchhh---HH-HHH--------hhCCCChhh
Q 001492 304 VWPYVIHGHYADAGDSAA-----LLSGA----------LNVPMVLTGHSLGRNK---LE-QLL--------KQGRQSKED 356 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~-----~l~~~----------~giP~V~t~H~l~~~~---~~-~l~--------~~g~~~~~~ 356 (1067)
..|||||+|.+-++.+.. ++... -...+|||.|++.+.- ++ .++ ..-.++...
T Consensus 247 ~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lgl~~~~ 326 (778)
T cd04299 247 IKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELGLSRDR 326 (778)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcCCCHHH
Confidence 469999999998777776 44321 1357899999984432 11 111 000111111
Q ss_pred hhhHhHHH-----HhHHHhhcccccCCEEEeCCHHH---HHHHHh-hcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEe
Q 001492 357 INSTYKIM-----RRIEGEELSLDAAELVITSTKQE---IDEQWG-LYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVI 427 (1067)
Q Consensus 357 i~~~y~~~-----~ri~~E~~~l~~Ad~Vi~~S~~~---~~~~~~-~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vI 427 (1067)
+....... ..+..-+.++..|+.|.++|+-. .++++. ++.+++. ...++.-|
T Consensus 327 ~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~~~~g~p~-------------------~~~~i~~I 387 (778)
T cd04299 327 FLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAGLWPGFPV-------------------EEVPIGHV 387 (778)
T ss_pred HhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhhhhccCCc-------------------ccCceece
Confidence 11100000 12344567899999999999876 333332 1333221 11268999
Q ss_pred CCCCCCCCccCCCCCCccccccccccCCCCC---C--------CCCCcchhhH-------hhhhh---------------
Q 001492 428 PPGMDFSNVVAQEDTPEVDGELTSLIGGTDG---S--------SPKAIPAIWS-------DVMRF--------------- 474 (1067)
Q Consensus 428 PnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~---~--------~~~~~~~~~~-------~~~~~--------------- 474 (1067)
-|||+...+.. |+.+..+.+..+..-. . ..-++...|+ .+..+
T Consensus 388 TNGVh~~~W~~----P~~~~l~~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~ 463 (778)
T cd04299 388 TNGVHVPTWVA----PEMRELYDRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGAS 463 (778)
T ss_pred eCCcchhhhcC----HHHHHHHHHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCc
Confidence 99999998871 1222222111100000 0 0001112222 11111
Q ss_pred ---------ccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccC---CCcEEEEEecCCChhhhhccchHHHHHHHHHH
Q 001492 475 ---------LTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRE---LANLTLIMGNRDDIEEMSSGNASVLITVLKLI 542 (1067)
Q Consensus 475 ---------~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~---~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~ 542 (1067)
..+|+.++|+++.|+...|+.++++..+.++.++-. .|...++.|.....++ ...+++..|..+.
T Consensus 464 ~~~~~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~---~gK~iIk~i~~~a 540 (778)
T cd04299 464 AEEIGEADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADE---PGKELIQEIVEFS 540 (778)
T ss_pred hhhhhhcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccch---HHHHHHHHHHHHH
Confidence 145777899999999999999999999888854322 3433346677643322 2356778888888
Q ss_pred HhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEe
Q 001492 543 DKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPAL--VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLV 620 (1067)
Q Consensus 543 ~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~--~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv 620 (1067)
+.....++|.|+...+-+--..+++.| ||+++||+ +|+.|++-+=||..|.+-+++..|...|-- ++.||+.+
T Consensus 541 ~~p~~~~kVvfle~Yd~~lA~~LvaG~----DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwai 615 (778)
T cd04299 541 RRPEFRGRIVFLEDYDMALARHLVQGV----DVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAI 615 (778)
T ss_pred hCcCCCCcEEEEcCCCHHHHHHHHhhh----hhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEe
Confidence 866777899997766554455667777 99999999 999999999999999999999999998887 78899999
Q ss_pred CC------------CCHHHHHHHHHHhhc----C------HHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Q 001492 621 DP------------HDQQAIADALLKLVS----E------KNLWVECRKNGWKNI-HLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 621 ~p------------~d~~~la~aL~~ll~----d------~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~ 670 (1067)
.+ .|.++|-+.|.+.+- + |..|.++.+++++.+ ..|||.+++++|.+.+-
T Consensus 616 g~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 616 GDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred CCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 87 566677777755433 2 788999999999988 59999999999998775
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.4e-14 Score=157.55 Aligned_cols=198 Identities=13% Similarity=0.155 Sum_probs=114.4
Q ss_pred EeCCCCCCC----C-chhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEe
Q 001492 782 LDCYDSKGA----P-DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYY 856 (1067)
Q Consensus 782 ~DiDGTLl~----~-~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~ 856 (1067)
+|.||||.. | ...+++.++++|++|.+.+ +. .|+|+|||+...+..+..-.++ .++++||+++..
T Consensus 2 lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~---~~-~v~IvSGR~~~~~~~~~~~~~i------~l~gehG~e~~~ 71 (235)
T PF02358_consen 2 LDYDGTLAPIVDDPDAAVPPPELRELLRALAADP---NN-TVAIVSGRSLDDLERFGGIPNI------GLAGEHGAEIRR 71 (235)
T ss_dssp EE-TTTSS---S-GGG----HHHHHHHHHHHHHS---E---EEEE-SS-HHHHHHH-S-SS-------EEEEGGGTEEEE
T ss_pred cccCCccCCCCCCccccCCCHHHHHHHHHHhccC---CC-EEEEEEeCCHHHhHHhcCCCCc------eEEEEeeEEecc
Confidence 599999654 3 3457899999999999984 44 5999999999996555444333 699999999998
Q ss_pred cCCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCCch---H
Q 001492 857 PGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKA---R 933 (1067)
Q Consensus 857 ~~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~---~ 933 (1067)
++...........+..|...+ .+.++....++++++.+.+ .++++||++..... .
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~~~~~pG~~iE~K-----------------~~sv~~Hyr~~~~~~~~~ 129 (235)
T PF02358_consen 72 PGGSEWTNLPADEDLEWKDEV-----REILEYFAERTPGSFIEDK-----------------EFSVAFHYRNAPPEFGEA 129 (235)
T ss_dssp TTE-EEE-TTGGGGHHHHHHH-----HHHHTTHHHHSTT-EEEEE-----------------TTEEEEE-TTS-ST----
T ss_pred CccccccccccccchHHHHHH-----HHHHHHHHhhccCcEEEEC-----------------CeEEEEEecCCCcchhhh
Confidence 764222111112334455544 3344555666777776665 46889999655422 1
Q ss_pred HHHHHHHHHHhc---CCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCC---cccEEEEecCCCCCChhhhhcCC-
Q 001492 934 RIDDLRQKLRMR---GLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLN---VANMFVILGESGDTDYEELISGA- 1006 (1067)
Q Consensus 934 ~~~el~~~L~~~---~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~---~e~vva~fGDs~N~D~~eML~~a- 1006 (1067)
...++.+.+... ...++++... ..+||.|.+++||.|+++|++.++.. .. +++|+||+.+ | ++||+.+
T Consensus 130 ~~~~l~~~l~~~~~~~~~~~v~~g~--~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~-~~l~~GDD~t-D-E~~f~~~~ 204 (235)
T PF02358_consen 130 QARELAEQLREILASHPGLEVVPGK--KVVEVRPPGVNKGSAVRRLLEELPFAGPKPD-FVLYIGDDRT-D-EDAFRALR 204 (235)
T ss_dssp THHHHHHHHHHHHHHH-T-EEEE-S--SEEEEE-TT--HHHHHHHHHTTS----------EEEEESSHH-H-HHHHHTTT
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECC--CEEEEEeCCCChHHHHHHHHHhcCccccccc-eeEEecCCCC-C-HHHHHHHH
Confidence 234444444331 1234444333 49999999999999999999998764 33 4455999999 9 9999964
Q ss_pred -----ceEEEeCCCc
Q 001492 1007 -----HKTLIMKGVV 1016 (1067)
Q Consensus 1007 -----g~gVaMgNA~ 1016 (1067)
+.+|.++...
T Consensus 205 ~~~~~~~~i~V~~~~ 219 (235)
T PF02358_consen 205 ELEEGGFGIKVGSVS 219 (235)
T ss_dssp TS----EEEEES---
T ss_pred hcccCCCCeEEEeec
Confidence 5688887765
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.6e-13 Score=135.46 Aligned_cols=131 Identities=31% Similarity=0.450 Sum_probs=94.1
Q ss_pred CcEEEEEeCCCCCCCHHHHHH-HHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCC
Q 001492 480 KPMILALSRPDPKKNITTLLK-AFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHH 557 (1067)
Q Consensus 480 ~~~Il~vgRld~~Kgi~~ll~-A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~ 557 (1067)
.++|+++|++.+.|+++.+++ ++.++. ...|++.+ |+|++++ ++ .++ ..++|.|+|++
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~--~~~p~~~l~i~G~~~~--~l-----------~~~-----~~~~v~~~g~~ 61 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLK--EKHPDIELIIIGNGPD--EL-----------KRL-----RRPNVRFHGFV 61 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHH--HHSTTEEEEEECESS---HH-----------CCH-----HHCTEEEE-S-
T ss_pred cccccccccccccccccchhhhHHHHHH--HHCcCEEEEEEeCCHH--HH-----------HHh-----cCCCEEEcCCH
Confidence 467999999999999999999 999985 34577877 8888663 11 111 23589999998
Q ss_pred CCCCHHHHHHHhhcCCcEEEecCC-CCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhh
Q 001492 558 KQYDVPEIYRLAAKTKGVFINPAL-VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLV 636 (1067)
Q Consensus 558 ~~~dl~~ly~~A~~~~dV~v~ps~-~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll 636 (1067)
+++.++|+.| |++++|+. .++++.+++|||++|+|||+++. +..+++.....|+++ ++|+++++++|.+++
T Consensus 62 --~e~~~~l~~~----dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 62 --EELPEILAAA----DVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp --HHHHHHHHC-----SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred --HHHHHHHHhC----CEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 5899999999 99999985 67899999999999999999999 566777656678888 789999999999998
Q ss_pred cC
Q 001492 637 SE 638 (1067)
Q Consensus 637 ~d 638 (1067)
+|
T Consensus 134 ~d 135 (135)
T PF13692_consen 134 ND 135 (135)
T ss_dssp H-
T ss_pred cC
Confidence 75
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.5e-12 Score=127.53 Aligned_cols=160 Identities=28% Similarity=0.327 Sum_probs=88.1
Q ss_pred ChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCcccc
Q 001492 191 GGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKE 270 (1067)
Q Consensus 191 GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k~ 270 (1067)
||+++|+.+|+++|+++| |+|+|+|+...... + + ....++.++++|+.+.. +
T Consensus 1 GG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~~-------~-~-------------~~~~~~~~~~~~~~~~~-~---- 52 (160)
T PF13579_consen 1 GGIERYVRELARALAARG--HEVTVVTPQPDPED-------D-E-------------EEEDGVRVHRLPLPRRP-W---- 52 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT---EEEEEEE---GGG---------S-------------EEETTEEEEEE--S-SS-S----
T ss_pred CCHHHHHHHHHHHHHHCC--CEEEEEecCCCCcc-------c-c-------------cccCCceEEeccCCccc-h----
Confidence 799999999999999999 99999998542211 0 0 11358999999875542 1
Q ss_pred cccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhC
Q 001492 271 LLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQG 350 (1067)
Q Consensus 271 ~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g 350 (1067)
.+.. ..+...+..++.. ...+||+||+|++.++.++.++++..++|+|++.|+......
T Consensus 53 -~~~~-~~~~~~~~~~l~~------------~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~------- 111 (160)
T PF13579_consen 53 -PLRL-LRFLRRLRRLLAA------------RRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRRG------- 111 (160)
T ss_dssp -GGGH-CCHHHHHHHHCHH------------CT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T-----------
T ss_pred -hhhh-HHHHHHHHHHHhh------------hccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhhc-------
Confidence 1111 1122222222100 125699999999766666766665779999999998542211
Q ss_pred CCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCC
Q 001492 351 RQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPG 430 (1067)
Q Consensus 351 ~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnG 430 (1067)
......+.+.+ |+..++.||.|+++|+...+.+.+ +. .++ +|+.|||||
T Consensus 112 ------~~~~~~~~~~~--~~~~~~~ad~vi~~S~~~~~~l~~-~g-~~~---------------------~ri~vipnG 160 (160)
T PF13579_consen 112 ------SRWKRRLYRWL--ERRLLRRADRVIVVSEAMRRYLRR-YG-VPP---------------------DRIHVIPNG 160 (160)
T ss_dssp --------HHHHHHHHH--HHHHHHH-SEEEESSHHHHHHHHH-H----G---------------------GGEEE----
T ss_pred ------cchhhHHHHHH--HHHHHhcCCEEEECCHHHHHHHHH-hC-CCC---------------------CcEEEeCcC
Confidence 00112222333 677899999999999998887765 32 222 399999998
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.9e-09 Score=124.46 Aligned_cols=327 Identities=10% Similarity=0.102 Sum_probs=184.1
Q ss_pred CChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCccc
Q 001492 190 TGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRK 269 (1067)
Q Consensus 190 ~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k 269 (1067)
|||...=...+|++|.+.| |+|.++++... . ..+.++ ..|..++.++..+. .+
T Consensus 11 TGGHi~Pala~a~~l~~~g--~~v~~vg~~~~---~------e~~l~~------------~~g~~~~~~~~~~l----~~ 63 (352)
T PRK12446 11 SAGHVTPNLAIIPYLKEDN--WDISYIGSHQG---I------EKTIIE------------KENIPYYSISSGKL----RR 63 (352)
T ss_pred cHHHHHHHHHHHHHHHhCC--CEEEEEECCCc---c------ccccCc------------ccCCcEEEEeccCc----CC
Confidence 9999999999999999998 99999987431 1 011111 12555666654222 11
Q ss_pred ccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhh
Q 001492 270 ELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQ 349 (1067)
Q Consensus 270 ~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~ 349 (1067)
...|..+ .+...++..+.+..+.+++ .+||+||++...++..+.+.++.+++|+++.-.+.....
T Consensus 64 ~~~~~~~-~~~~~~~~~~~~~~~i~~~-------~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~g~------- 128 (352)
T PRK12446 64 YFDLKNI-KDPFLVMKGVMDAYVRIRK-------LKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTPGL------- 128 (352)
T ss_pred CchHHHH-HHHHHHHHHHHHHHHHHHh-------cCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCccH-------
Confidence 1111111 1222223333333333333 689999999877777788899999999977555432211
Q ss_pred CCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCC
Q 001492 350 GRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPP 429 (1067)
Q Consensus 350 g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPn 429 (1067)
.. +...+.|+.|+++-+...+ .+ +. .++.+.-|
T Consensus 129 --------------~n-----r~~~~~a~~v~~~f~~~~~----~~---~~---------------------~k~~~tG~ 161 (352)
T PRK12446 129 --------------AN-----KIALRFASKIFVTFEEAAK----HL---PK---------------------EKVIYTGS 161 (352)
T ss_pred --------------HH-----HHHHHhhCEEEEEccchhh----hC---CC---------------------CCeEEECC
Confidence 11 1235677878775432111 11 11 26677766
Q ss_pred CCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHH-HHHHHhcccc
Q 001492 430 GMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTL-LKAFGECRPL 508 (1067)
Q Consensus 430 GiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~l-l~A~~~l~~l 508 (1067)
.+..+...... ......+...+++++||.+|.=-..+.+..+ .+++..+.
T Consensus 162 Pvr~~~~~~~~---------------------------~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~-- 212 (352)
T PRK12446 162 PVREEVLKGNR---------------------------EKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELL-- 212 (352)
T ss_pred cCCcccccccc---------------------------hHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhc--
Confidence 66553321110 0111223345678888887764445555333 33444442
Q ss_pred cCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHH
Q 001492 509 RELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLT 588 (1067)
Q Consensus 509 ~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~Egfglt 588 (1067)
..-+++.++|..+ .++ ... .+ ..+...++. .++++++|+.| |++|.- +-+.|
T Consensus 213 -~~~~vv~~~G~~~-~~~-----------~~~---~~---~~~~~~~f~-~~~m~~~~~~a----dlvIsr----~G~~t 264 (352)
T PRK12446 213 -LKYQIVHLCGKGN-LDD-----------SLQ---NK---EGYRQFEYV-HGELPDILAIT----DFVISR----AGSNA 264 (352)
T ss_pred -cCcEEEEEeCCch-HHH-----------HHh---hc---CCcEEecch-hhhHHHHHHhC----CEEEEC----CChhH
Confidence 2223444666542 211 111 11 122233442 25799999999 988854 56789
Q ss_pred HHHHHHcCCCEEEcCCC-----C----chhhhccCCceEEeCCC--CHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCC
Q 001492 589 LIEAAAHGLPMVATKNG-----G----PVDIHRALNNGLLVDPH--DQQAIADALLKLVSEKNLWVECRKNGWKNIHLFS 657 (1067)
Q Consensus 589 llEAmA~G~PVVat~~G-----g----~~eiv~~~~~Gllv~p~--d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fs 657 (1067)
+.|++++|+|+|.-... + ..+.+.....|..+... +++.++++|.++++|++.+++ .++.+.
T Consensus 265 ~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~~~~~-------~~~~~~ 337 (352)
T PRK12446 265 IFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNNEKYKT-------ALKKYN 337 (352)
T ss_pred HHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCHHHHHH-------HHHHcC
Confidence 99999999999987532 1 12234444556666432 578999999999999876432 222344
Q ss_pred HHHHHHHHHHHH
Q 001492 658 WPEHCRTYLTRV 669 (1067)
Q Consensus 658 w~~~a~~~l~~~ 669 (1067)
...-++++.+.+
T Consensus 338 ~~~aa~~i~~~i 349 (352)
T PRK12446 338 GKEAIQTIIDHI 349 (352)
T ss_pred CCCHHHHHHHHH
Confidence 445555555544
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.2e-11 Score=124.79 Aligned_cols=169 Identities=24% Similarity=0.246 Sum_probs=85.4
Q ss_pred CCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCc
Q 001492 188 SDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYL 267 (1067)
Q Consensus 188 ~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l 267 (1067)
+..||+++++.+|+++|+++| |+|++++....++... .........+....
T Consensus 9 ~~~GG~e~~~~~l~~~l~~~G--~~v~v~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~---- 59 (177)
T PF13439_consen 9 PNIGGAERVVLNLARALAKRG--HEVTVVSPGVKDPIEE-----------------------ELVKIFVKIPYPIR---- 59 (177)
T ss_dssp TSSSHHHHHHHHHHHHHHHTT---EEEEEESS-TTS-SS-----------------------TEEEE---TT-SST----
T ss_pred CCCChHHHHHHHHHHHHHHCC--CEEEEEEcCCCccchh-----------------------hccceeeeeecccc----
Confidence 569999999999999999999 9999998854322110 00111111111111
Q ss_pred ccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHH
Q 001492 268 RKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLL 347 (1067)
Q Consensus 268 ~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~ 347 (1067)
+ .......+. ..+.+.+.+ .+|||||+|.+.....+..... ++|+|+|.|+.+... ..
T Consensus 60 -~--~~~~~~~~~-------~~~~~~i~~-------~~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~---~~ 117 (177)
T PF13439_consen 60 -K--RFLRSFFFM-------RRLRRLIKK-------EKPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFER---RF 117 (177)
T ss_dssp -S--S--HHHHHH-------HHHHHHHHH-------HT-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--H---HT
T ss_pred -c--ccchhHHHH-------HHHHHHHHH-------cCCCeEEecccchhHHHHHhcc--CCCEEEEeCCCcccc---cc
Confidence 0 001111111 122222222 3599999998743333333333 999999999875320 00
Q ss_pred hhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEe
Q 001492 348 KQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVI 427 (1067)
Q Consensus 348 ~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vI 427 (1067)
...... ....+..+ .+...++.+|.+||+|+...+++.+ +. + +..++.||
T Consensus 118 ~~~~~~-----~~~~~~~~--~~~~~~~~~~~ii~vS~~~~~~l~~-~~-~---------------------~~~ki~vI 167 (177)
T PF13439_consen 118 LKSKLS-----PYSYLNFR--IERKLYKKADRIIAVSESTKDELIK-FG-I---------------------PPEKIHVI 167 (177)
T ss_dssp TTTSCC-----CHHHHHHC--TTHHHHCCSSEEEESSHHHHHHHHH-HT------------------------SS-EEE-
T ss_pred cccccc-----hhhhhhhh--hhhhHHhcCCEEEEECHHHHHHHHH-hC-C---------------------cccCCEEE
Confidence 000000 01111111 1344479999999999998888765 43 1 22489999
Q ss_pred CCCCCCCCcc
Q 001492 428 PPGMDFSNVV 437 (1067)
Q Consensus 428 PnGiD~~~f~ 437 (1067)
|||||.+.|.
T Consensus 168 ~ngid~~~F~ 177 (177)
T PF13439_consen 168 YNGIDTDRFR 177 (177)
T ss_dssp ---B-CCCH-
T ss_pred ECCccHHHcC
Confidence 9999999873
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.9e-10 Score=132.85 Aligned_cols=250 Identities=16% Similarity=0.026 Sum_probs=147.8
Q ss_pred CCceEEEEcCC-chhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEe
Q 001492 304 VWPYVIHGHYA-DAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVIT 382 (1067)
Q Consensus 304 ~~pDvIh~h~~-~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~ 382 (1067)
.+||+|+++.. ......+..++.+|+|+|+.+. ...+.++ +. . -+...+.+|.|+|
T Consensus 88 ~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~-P~~waw~-----~~--------~---------~r~l~~~~d~v~~ 144 (385)
T TIGR00215 88 AKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYIS-PQVWAWR-----KW--------R---------AKKIEKATDFLLA 144 (385)
T ss_pred cCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeC-CcHhhcC-----cc--------h---------HHHHHHHHhHhhc
Confidence 67999999875 2233344577788999996652 1100000 00 0 0223567899999
Q ss_pred CCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCC
Q 001492 383 STKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPK 462 (1067)
Q Consensus 383 ~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1067)
+++.+.+.+.. .|+ ++.++.|++-.........
T Consensus 145 ~~~~e~~~~~~------------------~g~--------~~~~vGnPv~~~~~~~~~~--------------------- 177 (385)
T TIGR00215 145 ILPFEKAFYQK------------------KNV--------PCRFVGHPLLDAIPLYKPD--------------------- 177 (385)
T ss_pred cCCCcHHHHHh------------------cCC--------CEEEECCchhhhccccCCC---------------------
Confidence 99876654321 111 4566777663221110000
Q ss_pred CcchhhHhhhhhccCCCCcEEEEE--eCCCC-CCCHHHHHHHHHhcccccCCCcEEE-E-EecCCChhhhhccchHHHHH
Q 001492 463 AIPAIWSDVMRFLTNPHKPMILAL--SRPDP-KKNITTLLKAFGECRPLRELANLTL-I-MGNRDDIEEMSSGNASVLIT 537 (1067)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~Il~v--gRld~-~Kgi~~ll~A~~~l~~l~~~~~l~l-I-vG~~~~~~~l~~~~~~~~~~ 537 (1067)
....+.++..++++++|+.+ +|..+ .|++..+++|+..+. +..|++.+ + +++.... ..
T Consensus 178 ----~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~--~~~p~~~~vi~~~~~~~~-----------~~ 240 (385)
T TIGR00215 178 ----RKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLE--QQEPDLRRVLPVVNFKRR-----------LQ 240 (385)
T ss_pred ----HHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHH--HhCCCeEEEEEeCCchhH-----------HH
Confidence 01122344455677877765 37766 789999999999885 34567654 3 3332221 22
Q ss_pred HHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc-hh-------
Q 001492 538 VLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP-VD------- 609 (1067)
Q Consensus 538 i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~-~e------- 609 (1067)
+......+++...|.+... +...+|++| |++|.+| |.+.+|+|++|+|+|...-..+ .-
T Consensus 241 ~~~~~~~~~~~~~v~~~~~----~~~~~l~aA----Dl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~ 307 (385)
T TIGR00215 241 FEQIKAEYGPDLQLHLIDG----DARKAMFAA----DAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLV 307 (385)
T ss_pred HHHHHHHhCCCCcEEEECc----hHHHHHHhC----CEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHH
Confidence 3334445544445655433 677899999 9999998 7777799999999888732111 11
Q ss_pred ---------hhccCCce--EEeCCCCHHHHHHHHHHhhcCH----HHHHHHHHHHHHHH
Q 001492 610 ---------IHRALNNG--LLVDPHDQQAIADALLKLVSEK----NLWVECRKNGWKNI 653 (1067)
Q Consensus 610 ---------iv~~~~~G--llv~p~d~~~la~aL~~ll~d~----~~~~~~~~~~~~~~ 653 (1067)
++.+..-. ++-+.-+++.|++.+.+++.|+ +.++++.+...+..
T Consensus 308 ~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 366 (385)
T TIGR00215 308 KTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENGLKAYKEMHRERQFFEELR 366 (385)
T ss_pred cCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHH
Confidence 11111000 1112346889999999999999 88777766655443
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.27 E-value=7e-11 Score=120.07 Aligned_cols=257 Identities=18% Similarity=0.189 Sum_probs=153.8
Q ss_pred CeEEEEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceE
Q 001492 775 RRLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEM 854 (1067)
Q Consensus 775 ~klllia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I 854 (1067)
....+|++|+||||+++ ..-.+.....+.+|++.| + .||+||.-+..++..+-+.++++ +-.+|+.||+.|
T Consensus 5 ~~~~lIFtDlD~TLl~~-~ye~~pA~pv~~el~d~G----~-~Vi~~SSKT~aE~~~l~~~l~v~---~~p~iaEnG~aI 75 (274)
T COG3769 5 QMPLLIFTDLDGTLLPH-SYEWQPAAPVLLELKDAG----V-PVILCSSKTRAEMLYLQKSLGVQ---GLPLIAENGAAI 75 (274)
T ss_pred ccceEEEEcccCcccCC-CCCCCccchHHHHHHHcC----C-eEEEeccchHHHHHHHHHhcCCC---CCceeecCCceE
Confidence 34567778999998874 223345668888999998 8 99999999999999999999986 347999999999
Q ss_pred EecCCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCccc---------ccccCCceEEEEE
Q 001492 855 YYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQE---------DQKSSNAHCISYL 925 (1067)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ki~~~ 925 (1067)
|-+.++...+........ ..+++-....+.++..+.++...+.-..........+.+ .....+.+.....
T Consensus 76 ~~p~~~~~~~~~~r~~~g-~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rEyseti~ 154 (274)
T COG3769 76 YLPKGWFPFDGKPREISG-ISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLREYSETII 154 (274)
T ss_pred EecccccccCCCCceecc-eEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHHhhhhee
Confidence 987544321110000000 111211122233444443333322111100000000000 0000111222222
Q ss_pred ecCCCchHHHHHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhC-CCcccEEEEecCCCCCChhhhhc
Q 001492 926 IKDPSKARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWR-LNVANMFVILGESGDTDYEELIS 1004 (1067)
Q Consensus 926 ~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~g-i~~e~vva~fGDs~N~D~~eML~ 1004 (1067)
-.+. ...+..+...|+..++ ++.++..+--|+.....||+|+..+++-+. .....+.+..||+.| | .+||+
T Consensus 155 ~rs~--d~~~~~~~~~L~e~gl----t~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~~r~t~~~GDg~n-D-~Pl~e 226 (274)
T COG3769 155 WRSS--DERMAQFTARLNERGL----TFVHGARFWHVLDASAGKGQAANWLLETYRRLGGARTTLGLGDGPN-D-APLLE 226 (274)
T ss_pred eccc--chHHHHHHHHHHhcCc----eEEeccceEEEeccccCccHHHHHHHHHHHhcCceeEEEecCCCCC-c-ccHHH
Confidence 1111 1234567777777654 334444578888888899999999987653 455564444999999 9 99999
Q ss_pred CCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhhc
Q 001492 1005 GAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVG 1061 (1067)
Q Consensus 1005 ~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g 1061 (1067)
...+.+.++|-..++. +++.+ -|-..++++.-..+|....++||.
T Consensus 227 v~d~AfiV~~lnre~~--~lv~~----------i~~vv~~~~~~~~~~~~e~~~~~~ 271 (274)
T COG3769 227 VMDYAFIVKGLNREGV--HLVSS----------IPAVVERIQREGPEGWREGLDHFF 271 (274)
T ss_pred hhhhheeecccchhhh--hcccc----------chhheeeccccCchHHHHHhhhhc
Confidence 9999999998874332 23322 233444556667889999999875
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.9e-11 Score=110.55 Aligned_cols=91 Identities=18% Similarity=0.308 Sum_probs=85.9
Q ss_pred EEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 001492 575 VFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIH 654 (1067)
Q Consensus 575 V~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~ 654 (1067)
++++|+..+++++.++|+||||+|||++..++..+++.++..+++++ |++++.++|..++++|+++++++++|++.+.
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~~~~~~~ia~~a~~~v~ 78 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLENPEERRRIAKNARERVL 78 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999988999997 9999999999999999999999999999995
Q ss_pred -cCCHHHHHHHHHH
Q 001492 655 -LFSWPEHCRTYLT 667 (1067)
Q Consensus 655 -~fsw~~~a~~~l~ 667 (1067)
+|+|...++++++
T Consensus 79 ~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 79 KRHTWEHRAEQILE 92 (92)
T ss_pred HhCCHHHHHHHHHC
Confidence 9999999998863
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.2e-08 Score=116.79 Aligned_cols=327 Identities=17% Similarity=0.150 Sum_probs=196.7
Q ss_pred CChHHHHHHHHHHHHHcCCCee-EEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCcc
Q 001492 190 TGGQIKYVVELARALARMPGVY-RVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLR 268 (1067)
Q Consensus 190 ~GG~~~yv~~LA~aLa~~G~v~-~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~ 268 (1067)
|||...-..-|+++|.++| + +|.++..... ..+.+ + ...+..++.++.++...+..
T Consensus 10 TGGHv~pAlAl~~~l~~~g--~~~v~~~~~~~~----------~e~~l----------~-~~~~~~~~~I~~~~~~~~~~ 66 (357)
T COG0707 10 TGGHVFPALALAEELAKRG--WEQVIVLGTGDG----------LEAFL----------V-KQYGIEFELIPSGGLRRKGS 66 (357)
T ss_pred CccchhHHHHHHHHHHhhC--ccEEEEeccccc----------ceeee----------c-cccCceEEEEecccccccCc
Confidence 8999999999999999999 7 4666633110 00111 1 11267777787755422222
Q ss_pred cccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHh
Q 001492 269 KELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLK 348 (1067)
Q Consensus 269 k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~ 348 (1067)
+..+... ..++..+.+..+.|.+ .+||+|.+...+.+..+.+++..+|+|+++...+.-....
T Consensus 67 ----~~~~~~~-~~~~~~~~~a~~il~~-------~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~G~a----- 129 (357)
T COG0707 67 ----LKLLKAP-FKLLKGVLQARKILKK-------LKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVPGLA----- 129 (357)
T ss_pred ----HHHHHHH-HHHHHHHHHHHHHHHH-------cCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCcchh-----
Confidence 2211111 1233334444445554 7899999988877777788888899999998887643321
Q ss_pred hCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeC
Q 001492 349 QGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIP 428 (1067)
Q Consensus 349 ~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIP 428 (1067)
. +...+.|+.|.+.-.. ... +.+..++.+.-
T Consensus 130 ------------n---------k~~~~~a~~V~~~f~~-~~~---------------------------~~~~~~~~~tG 160 (357)
T COG0707 130 ------------N---------KILSKFAKKVASAFPK-LEA---------------------------GVKPENVVVTG 160 (357)
T ss_pred ------------H---------HHhHHhhceeeecccc-ccc---------------------------cCCCCceEEec
Confidence 1 1124556666665542 110 11112567777
Q ss_pred CCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc
Q 001492 429 PGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPL 508 (1067)
Q Consensus 429 nGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l 508 (1067)
+.+..+.+. ... . ..++....++++||.+|.=-..+.+..++...... +
T Consensus 161 ~Pvr~~~~~-~~~--------------------------~--~~~~~~~~~~~~ilV~GGS~Ga~~ln~~v~~~~~~--l 209 (357)
T COG0707 161 IPVRPEFEE-LPA--------------------------A--EVRKDGRLDKKTILVTGGSQGAKALNDLVPEALAK--L 209 (357)
T ss_pred CcccHHhhc-cch--------------------------h--hhhhhccCCCcEEEEECCcchhHHHHHHHHHHHHH--h
Confidence 766665543 110 0 01111122678888887643333344444333322 1
Q ss_pred cCCCcEEE--EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCC
Q 001492 509 RELANLTL--IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFG 586 (1067)
Q Consensus 509 ~~~~~l~l--IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~Egfg 586 (1067)
.+ ++.+ ++|... +.++......++. +...++ .++++++|+.| |++|.= +-+
T Consensus 210 ~~--~~~v~~~~G~~~------------~~~~~~~~~~~~~---~~v~~f--~~dm~~~~~~A----DLvIsR----aGa 262 (357)
T COG0707 210 AN--RIQVIHQTGKND------------LEELKSAYNELGV---VRVLPF--IDDMAALLAAA----DLVISR----AGA 262 (357)
T ss_pred hh--CeEEEEEcCcch------------HHHHHHHHhhcCc---EEEeeH--HhhHHHHHHhc----cEEEeC----Ccc
Confidence 22 3444 445432 2334444444443 666666 46899999999 998854 457
Q ss_pred HHHHHHHHcCCCEEEcCCCCc--------hhhhccCCceEEeCCCC--HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcC
Q 001492 587 LTLIEAAAHGLPMVATKNGGP--------VDIHRALNNGLLVDPHD--QQAIADALLKLVSEKNLWVECRKNGWKNIHLF 656 (1067)
Q Consensus 587 ltllEAmA~G~PVVat~~Gg~--------~eiv~~~~~Gllv~p~d--~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~f 656 (1067)
+|+-|.+++|+|+|--..+.. ...+.+...|++++-.+ ++.+++.|.+++.+|+..++|..++++....-
T Consensus 263 ~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~~m~~~a~~~~~p~ 342 (357)
T COG0707 263 LTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENAKKLGKPD 342 (357)
T ss_pred cHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC
Confidence 999999999999999775433 22344555677776555 88999999999999999999998888765433
Q ss_pred CHHHHHH
Q 001492 657 SWPEHCR 663 (1067)
Q Consensus 657 sw~~~a~ 663 (1067)
.-..++.
T Consensus 343 aa~~i~~ 349 (357)
T COG0707 343 AAERIAD 349 (357)
T ss_pred HHHHHHH
Confidence 3333333
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=99.11 E-value=6.9e-09 Score=121.96 Aligned_cols=139 Identities=13% Similarity=0.215 Sum_probs=110.3
Q ss_pred HHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcE
Q 001492 496 TTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGV 575 (1067)
Q Consensus 496 ~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV 575 (1067)
...|++++.+. +..|++.+=+|-+.+. -.+|.++ .++ .+.+.|+|.. ..++.++|..| |+
T Consensus 291 s~~I~~i~~Lv--~~lPd~~f~Iga~te~----------s~kL~~L-~~y--~nvvly~~~~-~~~l~~ly~~~----dl 350 (438)
T TIGR02919 291 SDQIEHLEEIV--QALPDYHFHIAALTEM----------SSKLMSL-DKY--DNVKLYPNIT-TQKIQELYQTC----DI 350 (438)
T ss_pred HHHHHHHHHHH--HhCCCcEEEEEecCcc----------cHHHHHH-Hhc--CCcEEECCcC-hHHHHHHHHhc----cE
Confidence 89999999984 6789999844776531 1345555 555 5566677765 45799999999 99
Q ss_pred EEecCCCCCCCHHHHHHHHcCCCEEEcCC-CCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 001492 576 FINPALVEPFGLTLIEAAAHGLPMVATKN-GGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIH 654 (1067)
Q Consensus 576 ~v~ps~~EgfgltllEAmA~G~PVVat~~-Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~ 654 (1067)
++.++..|+|++++.||+.+|+||||.+. -|+.+++.+ |.+++++|+++|+++|.++|++++.+++.-..-++.+.
T Consensus 351 yLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL~d~~~~~~~~~~q~~~a~ 427 (438)
T TIGR02919 351 YLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLLNDPNQFRELLEQQREHAN 427 (438)
T ss_pred EEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999884 456677764 88999999999999999999999887776555555543
Q ss_pred cCC
Q 001492 655 LFS 657 (1067)
Q Consensus 655 ~fs 657 (1067)
.-+
T Consensus 428 ~~~ 430 (438)
T TIGR02919 428 DIS 430 (438)
T ss_pred cCC
Confidence 333
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=99.05 E-value=8.3e-09 Score=106.35 Aligned_cols=180 Identities=19% Similarity=0.146 Sum_probs=113.6
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
+|++|...|. | +..||.++.+.+|+..|+++| ++|+|+++....+..
T Consensus 3 kIaIiGtrGI----P------a~YGGfET~ve~L~~~l~~~g--~~v~Vyc~~~~~~~~--------------------- 49 (185)
T PF09314_consen 3 KIAIIGTRGI----P------ARYGGFETFVEELAPRLVSKG--IDVTVYCRSDYYPYK--------------------- 49 (185)
T ss_pred eEEEEeCCCC----C------cccCcHHHHHHHHHHHHhcCC--ceEEEEEccCCCCCC---------------------
Confidence 7999998776 2 458899999999999999999 999999985432211
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc-hhHHHHHHHh
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD-AGDSAALLSG 325 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~-a~~~a~~l~~ 325 (1067)
..+..|++++.+|.... . + +..+...+ ..+..++.. ...+..+.||||.+... .+.+..++..
T Consensus 50 ~~~y~gv~l~~i~~~~~-g--~-------~~si~yd~----~sl~~al~~--~~~~~~~~~ii~ilg~~~g~~~~~~~r~ 113 (185)
T PF09314_consen 50 EFEYNGVRLVYIPAPKN-G--S-------AESIIYDF----LSLLHALRF--IKQDKIKYDIILILGYGIGPFFLPFLRK 113 (185)
T ss_pred CcccCCeEEEEeCCCCC-C--c-------hHHHHHHH----HHHHHHHHH--HhhccccCCEEEEEcCCccHHHHHHHHh
Confidence 12246999999986332 0 0 11111111 111111100 00012357899999875 3444444443
Q ss_pred --cCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHH
Q 001492 326 --ALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLE 403 (1067)
Q Consensus 326 --~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~ 403 (1067)
..|.|++++.|++.+..- ++. ..-+...++ .|+.+.+.||.+|+.|+...+.+...|..
T Consensus 114 ~~~~g~~v~vN~DGlEWkR~-------KW~-----~~~k~~lk~-~E~~avk~ad~lIaDs~~I~~y~~~~y~~------ 174 (185)
T PF09314_consen 114 LRKKGGKVVVNMDGLEWKRA-------KWG-----RPAKKYLKF-SEKLAVKYADRLIADSKGIQDYIKERYGR------ 174 (185)
T ss_pred hhhcCCcEEECCCcchhhhh-------hcC-----HHHHHHHHH-HHHHHHHhCCEEEEcCHHHHHHHHHHcCC------
Confidence 247799999999855331 111 111222222 58889999999999999877776666551
Q ss_pred HHHHHHHhcCcccCCCCCCCEEEeCCCCC
Q 001492 404 KVLRARARRGVNCHGRYMPRMVVIPPGMD 432 (1067)
Q Consensus 404 ~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD 432 (1067)
.+..+||+|.|
T Consensus 175 ------------------~~s~~IaYGad 185 (185)
T PF09314_consen 175 ------------------KKSTFIAYGAD 185 (185)
T ss_pred ------------------CCcEEecCCCC
Confidence 27899999986
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=98.96 E-value=9.3e-08 Score=112.55 Aligned_cols=127 Identities=16% Similarity=0.088 Sum_probs=86.1
Q ss_pred CCCcEEEEEeCCCC---CCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeC
Q 001492 478 PHKPMILALSRPDP---KKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYP 554 (1067)
Q Consensus 478 ~~~~~Il~vgRld~---~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~ 554 (1067)
...+++++.|.... .+-+..+++|+..+. ..+.+++|...... ....++|.+.
T Consensus 238 ~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~-----~~~i~~~g~~~~~~-------------------~~~~~~v~~~ 293 (401)
T cd03784 238 GRPPVYVGFGSMVVRDPEALARLDVEAVATLG-----QRAILSLGWGGLGA-------------------EDLPDNVRVV 293 (401)
T ss_pred CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcC-----CeEEEEccCccccc-------------------cCCCCceEEe
Confidence 44567788888754 344455666665541 13334556543210 2345689999
Q ss_pred CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc----hhhhccCCceEEeCCC--CHHHH
Q 001492 555 KHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----VDIHRALNNGLLVDPH--DQQAI 628 (1067)
Q Consensus 555 g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~----~eiv~~~~~Gllv~p~--d~~~l 628 (1067)
++++ ...++..| |++|.- |-..|+.||+++|+|+|....++- ...+.....|+.+++. +.+++
T Consensus 294 ~~~p---~~~ll~~~----d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~~l 362 (401)
T cd03784 294 DFVP---HDWLLPRC----AAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAERL 362 (401)
T ss_pred CCCC---HHHHhhhh----heeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHHHH
Confidence 9875 45678889 999943 445899999999999999876552 3345555678777665 68999
Q ss_pred HHHHHHhhcCH
Q 001492 629 ADALLKLVSEK 639 (1067)
Q Consensus 629 a~aL~~ll~d~ 639 (1067)
+++|.++++++
T Consensus 363 ~~al~~~l~~~ 373 (401)
T cd03784 363 AAALRRLLDPP 373 (401)
T ss_pred HHHHHHHhCHH
Confidence 99999999854
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=98.94 E-value=9.3e-10 Score=120.36 Aligned_cols=211 Identities=19% Similarity=0.104 Sum_probs=107.6
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcC--CCcccccCCCC----
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSY--GEPAEMLTGGP---- 240 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y--~~~~e~l~~~~---- 240 (1067)
||++|+.... | -..+||...++..|+++|+++| |+|.|+++.+.. ....+ ..+...+.-..
T Consensus 1 kIl~vt~E~~----P-----~~k~GGLgdv~~~L~kaL~~~G--~~V~Vi~P~y~~--~~~~~~~~~~~~~~~~~~~~~v 67 (245)
T PF08323_consen 1 KILMVTSEYA----P-----FAKVGGLGDVVGSLPKALAKQG--HDVRVIMPKYGF--IDEEYFQLEPVRRLSVPFGGPV 67 (245)
T ss_dssp EEEEE-S-BT----T-----TB-SSHHHHHHHHHHHHHHHTT---EEEEEEE-THH--HHHHCTTEEEEEEES-STTCEE
T ss_pred CEEEEEcccC----c-----ccccCcHhHHHHHHHHHHHhcC--CeEEEEEccchh--hhhhhhcceEEEEecccccccc
Confidence 6999986553 2 1489999999999999999999 999999997632 11111 00000000000
Q ss_pred -----CCCCccccccCCeEEEeccCCCCccCcccccccch-hHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCC
Q 001492 241 -----EDDGIEVGESSGAYIIRIPFGPRDKYLRKELLWPY-IQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYA 314 (1067)
Q Consensus 241 -----~~~~~~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~-l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~ 314 (1067)
..........+|+.++.+.... +..+..+... -..+.+...+.. .++++..+.+... ..+|||||+|.|
T Consensus 68 ~~~~~~~~~v~~~~~~~v~v~~i~~~~---~f~r~~iY~~~~~~~~d~~~rf~-~fs~a~le~~~~l-~~~pDIIH~hDW 142 (245)
T PF08323_consen 68 PVGVWYEVRVYRYPVDGVPVYFIDNPE---YFDRPGIYGDNGGDYPDNAERFA-FFSRAALELLKKL-GWKPDIIHCHDW 142 (245)
T ss_dssp EEE----EEEEEEEETTEEEEEEESHH---HHGSSSSSBSTSSBHTTHHHHHH-HHHHHHHHHHCTC-T-S-SEEEEECG
T ss_pred ccccceEEEEEEEEcCCccEEEecChh---hccccceeccCCCcchhHHHHHH-HHHHHHHHHHHhh-CCCCCEEEecCc
Confidence 0000000113577776654321 1222222210 001111121111 1233333333331 247999999999
Q ss_pred chhHHHHHHHhcC-------CCcEEEEeCCCchhhHHH--HHhhCCCChhh--hhhHhHHHHhHHHhhcccccCCEEEeC
Q 001492 315 DAGDSAALLSGAL-------NVPMVLTGHSLGRNKLEQ--LLKQGRQSKED--INSTYKIMRRIEGEELSLDAAELVITS 383 (1067)
Q Consensus 315 ~a~~~a~~l~~~~-------giP~V~t~H~l~~~~~~~--l~~~g~~~~~~--i~~~y~~~~ri~~E~~~l~~Ad~Vi~~ 383 (1067)
.++.++.+++... ++|+|+|+|++....... .+..-.++... ....+.....+...+..+..||.|+|+
T Consensus 143 ~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi~~AD~v~TV 222 (245)
T PF08323_consen 143 HTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGIVYADKVTTV 222 (245)
T ss_dssp GGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHHHHSSEEEES
T ss_pred hHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHHHhcCEeeeC
Confidence 9999999988776 599999999974322100 00000001100 001111223444567789999999999
Q ss_pred CHHHHHHHHhhc
Q 001492 384 TKQEIDEQWGLY 395 (1067)
Q Consensus 384 S~~~~~~~~~~y 395 (1067)
|+.+++++...+
T Consensus 223 S~~Ya~Ei~~~~ 234 (245)
T PF08323_consen 223 SPTYAREIQTPE 234 (245)
T ss_dssp SHHHHHHTTSHH
T ss_pred CHHHHHHHhCcc
Confidence 999999876654
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=98.84 E-value=2e-06 Score=101.09 Aligned_cols=110 Identities=21% Similarity=0.165 Sum_probs=75.8
Q ss_pred CCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCch----hhhccCCceEEeCCC
Q 001492 548 YGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPV----DIHRALNNGLLVDPH 623 (1067)
Q Consensus 548 ~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~----eiv~~~~~Gllv~p~ 623 (1067)
.++|.+.+++++ .+++..| |++|..+ |+ .|+.||+++|+|+|.....+-. ..+.....|..++..
T Consensus 274 ~~~v~~~~~~p~---~~ll~~~----~~~I~hg---G~-~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~ 342 (392)
T TIGR01426 274 PPNVEVRQWVPQ---LEILKKA----DAFITHG---GM-NSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPPE 342 (392)
T ss_pred CCCeEEeCCCCH---HHHHhhC----CEEEECC---Cc-hHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEeccc
Confidence 467888888865 3788888 9988653 33 4889999999999997654433 334455667777643
Q ss_pred --CHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 001492 624 --DQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTR 668 (1067)
Q Consensus 624 --d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~ 668 (1067)
+.++++++|.+++.+++.++++.+-+.+....-.-+..++.+.++
T Consensus 343 ~~~~~~l~~ai~~~l~~~~~~~~~~~l~~~~~~~~~~~~aa~~i~~~ 389 (392)
T TIGR01426 343 EVTAEKLREAVLAVLSDPRYAERLRKMRAEIREAGGARRAADEIEGF 389 (392)
T ss_pred cCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHh
Confidence 578999999999999986666544433333344555555554443
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.2e-08 Score=104.68 Aligned_cols=69 Identities=7% Similarity=0.095 Sum_probs=59.6
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCc
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNAN 1047 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~ 1047 (1067)
.|...++.+++++|++++++++ |||+.| | ++|++.+|+++||+||. ++++.+|+ +|+..
T Consensus 82 pkp~~~~~~~~~l~~~~~ev~~-iGD~~n-D-i~~~~~ag~~~am~nA~---~~lk~~A~---------------~I~~~ 140 (169)
T TIGR02726 82 KKTEPYAQMLEEMNISDAEVCY-VGDDLV-D-LSMMKRVGLAVAVGDAV---ADVKEAAA---------------YVTTA 140 (169)
T ss_pred CCHHHHHHHHHHcCcCHHHEEE-ECCCHH-H-HHHHHHCCCeEECcCch---HHHHHhCC---------------EEcCC
Confidence 4567899999999999999999 999999 9 99999999999999999 67777887 88877
Q ss_pred ccHHHHHHHH
Q 001492 1048 AKVDEIANAL 1057 (1067)
Q Consensus 1048 ~~~dgI~~al 1057 (1067)
+..+|+...+
T Consensus 141 ~~~~g~v~e~ 150 (169)
T TIGR02726 141 RGGHGAVREV 150 (169)
T ss_pred CCCCCHHHHH
Confidence 7777654333
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.1e-08 Score=103.79 Aligned_cols=74 Identities=11% Similarity=0.031 Sum_probs=62.9
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCc
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNAN 1047 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~ 1047 (1067)
+|..++..+++++|++++++++ +||+.| | ++|++.+|.+++|.|+.+ ..+..++ ++++.
T Consensus 76 ~k~~~~~~~~~~~~~~~~~~~~-vGDs~~-D-~~~~~~ag~~~~v~~~~~---~~~~~a~---------------~i~~~ 134 (154)
T TIGR01670 76 NKLIAFSDILEKLALAPENVAY-IGDDLI-D-WPVMEKVGLSVAVADAHP---LLIPRAD---------------YVTRI 134 (154)
T ss_pred chHHHHHHHHHHcCCCHHHEEE-ECCCHH-H-HHHHHHCCCeEecCCcCH---HHHHhCC---------------EEecC
Confidence 4888999999999999999998 999999 9 999999999999999983 4455555 88877
Q ss_pred ccHHH-HHHHHHhhcc
Q 001492 1048 AKVDE-IANALRQVGK 1062 (1067)
Q Consensus 1048 ~~~dg-I~~al~~~g~ 1062 (1067)
...+| ++++++++=.
T Consensus 135 ~~~~g~~~~~~~~~~~ 150 (154)
T TIGR01670 135 AGGRGAVREVCELLLL 150 (154)
T ss_pred CCCCcHHHHHHHHHHH
Confidence 76555 9999887643
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.81 E-value=4.4e-06 Score=94.84 Aligned_cols=263 Identities=19% Similarity=0.251 Sum_probs=162.3
Q ss_pred CCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeC
Q 001492 304 VWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITS 383 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~ 383 (1067)
.+||++...-.........-++..|+|+++----+-...+ ..|....++ .+..++..|.|++.
T Consensus 122 ~~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRLS~rS~---------------~~y~k~~~~--~~~~~~~i~li~aQ 184 (419)
T COG1519 122 WRPKLLIIMETELWPNLINELKRRGIPLVLVNARLSDRSF---------------ARYAKLKFL--ARLLFKNIDLILAQ 184 (419)
T ss_pred cCCCEEEEEeccccHHHHHHHHHcCCCEEEEeeeechhhh---------------HHHHHHHHH--HHHHHHhcceeeec
Confidence 4699877655433334445566789998753322211111 122222222 35568999999999
Q ss_pred CHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCC
Q 001492 384 TKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKA 463 (1067)
Q Consensus 384 S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1067)
|+...+++..+ |+. ++.+.-| +.++ .... +.
T Consensus 185 se~D~~Rf~~L------------------Ga~-------~v~v~GN-lKfd--~~~~---------------------~~ 215 (419)
T COG1519 185 SEEDAQRFRSL------------------GAK-------PVVVTGN-LKFD--IEPP---------------------PQ 215 (419)
T ss_pred CHHHHHHHHhc------------------CCc-------ceEEecc-eeec--CCCC---------------------hh
Confidence 99988887544 221 3444433 2111 1111 01
Q ss_pred cchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEE-EecCCChhhhhccchHHHHHHHHHH
Q 001492 464 IPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLI-MGNRDDIEEMSSGNASVLITVLKLI 542 (1067)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lI-vG~~~~~~~l~~~~~~~~~~i~~l~ 542 (1067)
++...+..+.... +.++++++.+.-+ .--+.+++++..++ +..|++.+| |+..++ -...+.+++
T Consensus 216 ~~~~~~~~r~~l~-~~r~v~iaaSTH~--GEeei~l~~~~~l~--~~~~~~llIlVPRHpE----------Rf~~v~~l~ 280 (419)
T COG1519 216 LAAELAALRRQLG-GHRPVWVAASTHE--GEEEIILDAHQALK--KQFPNLLLILVPRHPE----------RFKAVENLL 280 (419)
T ss_pred hHHHHHHHHHhcC-CCCceEEEecCCC--chHHHHHHHHHHHH--hhCCCceEEEecCChh----------hHHHHHHHH
Confidence 1111222233322 3378888888832 33356889999985 567787764 554443 367788888
Q ss_pred HhcCCCCcEEeCCC-CC-----------CCCHHHHHHHhhcCCcEEEec-CCCCCCCHHHHHHHHcCCCEEEcCC-CCch
Q 001492 543 DKYDLYGQVAYPKH-HK-----------QYDVPEIYRLAAKTKGVFINP-ALVEPFGLTLIEAAAHGLPMVATKN-GGPV 608 (1067)
Q Consensus 543 ~~~~l~~~V~~~g~-~~-----------~~dl~~ly~~A~~~~dV~v~p-s~~EgfgltllEAmA~G~PVVat~~-Gg~~ 608 (1067)
...++.- ..+-.. .+ .-++..+|..| |+.++- |+.+--|--++|++++|+|||.-.. --..
T Consensus 281 ~~~gl~~-~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~a----diAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ 355 (419)
T COG1519 281 KRKGLSV-TRRSQGDPPFSDTDVLLGDTMGELGLLYGIA----DIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFS 355 (419)
T ss_pred HHcCCeE-EeecCCCCCCCCCcEEEEecHhHHHHHHhhc----cEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHH
Confidence 8887731 111111 11 23689999999 886665 6766567889999999999999653 2233
Q ss_pred hh---hccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 001492 609 DI---HRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIH 654 (1067)
Q Consensus 609 ei---v~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~ 654 (1067)
|+ +...+.|+.|+ |.+.++.++..++++++.++++++++...+.
T Consensus 356 ei~~~l~~~ga~~~v~--~~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~ 402 (419)
T COG1519 356 DIAERLLQAGAGLQVE--DADLLAKAVELLLADEDKREAYGRAGLEFLA 402 (419)
T ss_pred HHHHHHHhcCCeEEEC--CHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 33 33344577775 5899999999999999999999999998874
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.79 E-value=2e-06 Score=101.00 Aligned_cols=151 Identities=17% Similarity=0.271 Sum_probs=95.9
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEEEE--EecCCChhhhhccchHHHHHHHHHHHhcCCC--------------CcEEe
Q 001492 490 DPKKNITTLLKAFGECRPLRELANLTLI--MGNRDDIEEMSSGNASVLITVLKLIDKYDLY--------------GQVAY 553 (1067)
Q Consensus 490 d~~Kgi~~ll~A~~~l~~l~~~~~l~lI--vG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~--------------~~V~~ 553 (1067)
...++++.+++++..+.+ . +++.++ +.+..+. ..+.+.+...++. +.+.+
T Consensus 218 e~~~~lp~~l~al~~L~~--~-~~~~~v~~~~~~~~~-----------~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v 283 (396)
T TIGR03492 218 EAYRNLKLLLRALEALPD--S-QPFVFLAAIVPSLSL-----------EKLQAILEDLGWQLEGSSEDQTSLFQKGTLEV 283 (396)
T ss_pred HHHccHHHHHHHHHHHhh--C-CCeEEEEEeCCCCCH-----------HHHHHHHHhcCceecCCccccchhhccCceEE
Confidence 346788999999999842 2 565553 3233322 2233334433432 12333
Q ss_pred CCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc---hhhhcc----CCceEEeCCCCHH
Q 001492 554 PKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP---VDIHRA----LNNGLLVDPHDQQ 626 (1067)
Q Consensus 554 ~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~---~eiv~~----~~~Gllv~p~d~~ 626 (1067)
..+ ..++.++|+.| |++|..| |.+..|++++|+|+|.....+. ..+.+. ...++.+...+++
T Consensus 284 ~~~--~~~~~~~l~~A----DlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~l~~~~~~ 352 (396)
T TIGR03492 284 LLG--RGAFAEILHWA----DLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVFLASKNPE 352 (396)
T ss_pred Eec--hHhHHHHHHhC----CEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEecCCCCHH
Confidence 333 35799999999 9999874 5566999999999999874333 122222 1245555567889
Q ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHH
Q 001492 627 AIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTY 665 (1067)
Q Consensus 627 ~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~ 665 (1067)
.+++++.++++|++.++++.+++++.. .....+.+++..
T Consensus 353 ~l~~~l~~ll~d~~~~~~~~~~~~~~lg~~~a~~~ia~~i 392 (396)
T TIGR03492 353 QAAQVVRQLLADPELLERCRRNGQERMGPPGASARIAESI 392 (396)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 999999999999998888875555444 344445555443
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.4e-08 Score=106.20 Aligned_cols=69 Identities=12% Similarity=0.039 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcc
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANA 1048 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~ 1048 (1067)
|..+++.+++++|++++++++ |||+.| | ++|++.+|++++|+++. +..+..++ |+++..
T Consensus 97 k~~~l~~~~~~~gl~~~ev~~-VGDs~~-D-~~~a~~aG~~~~v~~~~---~~~~~~a~---------------~v~~~~ 155 (183)
T PRK09484 97 KLIAFSDLLEKLAIAPEQVAY-IGDDLI-D-WPVMEKVGLSVAVADAH---PLLLPRAD---------------YVTRIA 155 (183)
T ss_pred HHHHHHHHHHHhCCCHHHEEE-ECCCHH-H-HHHHHHCCCeEecCChh---HHHHHhCC---------------EEecCC
Confidence 557899999999999999999 999999 9 99999999999998876 44455555 787666
Q ss_pred cHHHHHHHHH
Q 001492 1049 KVDEIANALR 1058 (1067)
Q Consensus 1049 ~~dgI~~al~ 1058 (1067)
..+|....|.
T Consensus 156 ~g~g~~~el~ 165 (183)
T PRK09484 156 GGRGAVREVC 165 (183)
T ss_pred CCCCHHHHHH
Confidence 6566655443
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.3e-08 Score=115.28 Aligned_cols=71 Identities=13% Similarity=0.152 Sum_probs=64.1
Q ss_pred CCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeec
Q 001492 966 LASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVN 1045 (1067)
Q Consensus 966 gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt 1045 (1067)
+..|+.+++.+++++|++++++++ |||+.| | ++|++.+|+|||| ||. +.++..|+ +++
T Consensus 246 ~k~K~~~L~~la~~lgi~~~qtIa-VGDg~N-D-l~m~~~AGlgiA~-nAk---p~Vk~~Ad---------------~~i 303 (322)
T PRK11133 246 AQYKADTLTRLAQEYEIPLAQTVA-IGDGAN-D-LPMIKAAGLGIAY-HAK---PKVNEQAQ---------------VTI 303 (322)
T ss_pred cccHHHHHHHHHHHcCCChhhEEE-EECCHH-H-HHHHHHCCCeEEe-CCC---HHHHhhCC---------------EEe
Confidence 458999999999999999999999 999999 9 9999999999999 999 66777777 888
Q ss_pred CcccHHHHHHHHH
Q 001492 1046 ANAKVDEIANALR 1058 (1067)
Q Consensus 1046 ~~~~~dgI~~al~ 1058 (1067)
...+-+||..-|.
T Consensus 304 ~~~~l~~~l~~~~ 316 (322)
T PRK11133 304 RHADLMGVLCILS 316 (322)
T ss_pred cCcCHHHHHHHhc
Confidence 8888999988763
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.66 E-value=4.6e-06 Score=95.32 Aligned_cols=112 Identities=16% Similarity=0.226 Sum_probs=75.7
Q ss_pred CCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcC
Q 001492 493 KNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKT 572 (1067)
Q Consensus 493 Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~ 572 (1067)
-+...+++++..+ +++.+|+|+.+.. .+ .+.+++.+.++.+ +++.++|..|
T Consensus 198 ~~~~~l~~~l~~~------~~~~~i~~~~~~~-----------------~~--~~~~~v~~~~~~~-~~~~~~l~~a--- 248 (321)
T TIGR00661 198 EYRYKILELLGKI------ANVKFVCYSYEVA-----------------KN--SYNENVEIRRITT-DNFKELIKNA--- 248 (321)
T ss_pred CCHHHHHHHHHhC------CCeEEEEeCCCCC-----------------cc--ccCCCEEEEECCh-HHHHHHHHhC---
Confidence 4556777777665 3556676643210 01 1235788887755 6899999999
Q ss_pred CcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchh------hhccCCceEEeCCCCHHHHHHHHHHhhcCH
Q 001492 573 KGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVD------IHRALNNGLLVDPHDQQAIADALLKLVSEK 639 (1067)
Q Consensus 573 ~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~e------iv~~~~~Gllv~p~d~~~la~aL~~ll~d~ 639 (1067)
|++|.-+ | ..++.||+++|+|+|.....+..| .+.+.+.|+.++..+. ++.+++...++++
T Consensus 249 -d~vI~~~---G-~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~-~~~~~~~~~~~~~ 315 (321)
T TIGR00661 249 -ELVITHG---G-FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKEL-RLLEAILDIRNMK 315 (321)
T ss_pred -CEEEECC---C-hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhhH-HHHHHHHhccccc
Confidence 9999764 2 247999999999999988755323 3555567888887776 5566666666554
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=98.65 E-value=3.3e-06 Score=96.05 Aligned_cols=117 Identities=19% Similarity=0.281 Sum_probs=78.5
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCC
Q 001492 479 HKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHK 558 (1067)
Q Consensus 479 ~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~ 558 (1067)
...+++++|..+.. .+++++..+. ...+ +++|.... + .-.++|.+.++.
T Consensus 192 ~~~iLv~~gg~~~~----~~~~~l~~~~----~~~~-~v~g~~~~--~-------------------~~~~ni~~~~~~- 240 (318)
T PF13528_consen 192 EPKILVYFGGGGPG----DLIEALKALP----DYQF-IVFGPNAA--D-------------------PRPGNIHVRPFS- 240 (318)
T ss_pred CCEEEEEeCCCcHH----HHHHHHHhCC----CCeE-EEEcCCcc--c-------------------ccCCCEEEeecC-
Confidence 45678899988765 6677777662 1223 34465420 0 004678877762
Q ss_pred CCCHHHHHHHhhcCCcEEEecCCCCCCCH-HHHHHHHcCCCEEEcCCCCchh------hhccCCceEEeCC--CCHHHHH
Q 001492 559 QYDVPEIYRLAAKTKGVFINPALVEPFGL-TLIEAAAHGLPMVATKNGGPVD------IHRALNNGLLVDP--HDQQAIA 629 (1067)
Q Consensus 559 ~~dl~~ly~~A~~~~dV~v~ps~~Egfgl-tllEAmA~G~PVVat~~Gg~~e------iv~~~~~Gllv~p--~d~~~la 629 (1067)
..++.+++..| |++|.- -|. |+.|++++|+|+|.-...+..| .++..+-|..+++ -+++.|+
T Consensus 241 ~~~~~~~m~~a----d~vIs~-----~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~ 311 (318)
T PF13528_consen 241 TPDFAELMAAA----DLVISK-----GGYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLA 311 (318)
T ss_pred hHHHHHHHHhC----CEEEEC-----CCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHH
Confidence 37899999999 998865 354 5999999999999987654322 3455556777654 3578888
Q ss_pred HHHHHh
Q 001492 630 DALLKL 635 (1067)
Q Consensus 630 ~aL~~l 635 (1067)
++|.++
T Consensus 312 ~~l~~~ 317 (318)
T PF13528_consen 312 EFLERL 317 (318)
T ss_pred HHHhcC
Confidence 888764
|
|
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.3e-07 Score=103.24 Aligned_cols=322 Identities=19% Similarity=0.233 Sum_probs=178.0
Q ss_pred eEEEEcCCchhHHHHHHHhc--CCCcEEEEeCCCchhhHHHHHhhCCC---------ChhhhhhHhHHHHhHHHhhcccc
Q 001492 307 YVIHGHYADAGDSAALLSGA--LNVPMVLTGHSLGRNKLEQLLKQGRQ---------SKEDINSTYKIMRRIEGEELSLD 375 (1067)
Q Consensus 307 DvIh~h~~~a~~~a~~l~~~--~giP~V~t~H~l~~~~~~~l~~~g~~---------~~~~i~~~y~~~~ri~~E~~~l~ 375 (1067)
-|-|.|.|.+|.. ..+++. +.|-.|+|.|..--.. ++-.|.. .-+.-.....|..|...|+.+..
T Consensus 176 vVahFHEW~AGVg-L~l~R~rrl~iaTifTTHATLLGR---yLCA~~~DfYNnLd~f~vD~EAGkr~IYHrYC~ERaa~h 251 (692)
T KOG3742|consen 176 VVAHFHEWQAGVG-LILCRARRLDIATIFTTHATLLGR---YLCAGNVDFYNNLDSFDVDKEAGKRQIYHRYCLERAAAH 251 (692)
T ss_pred HHHHHHHHHhccc-hheehhcccceEEEeehhHHHHHH---HHhcccchhhhchhhcccchhhccchhHHHHHHHHHhhh
Confidence 4557777866543 344444 4455689999642111 1111110 11111123346777788898999
Q ss_pred cCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCC
Q 001492 376 AAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGG 455 (1067)
Q Consensus 376 ~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~ 455 (1067)
.|+...++|+-..-+-..+... . .=.+.|||.+..+|...- +.+.+.
T Consensus 252 ~AhVFTTVSeITa~EAeHlLkR-K-----------------------PD~itPNGLNV~KFsA~H-------EFQNLH-- 298 (692)
T KOG3742|consen 252 TAHVFTTVSEITALEAEHLLKR-K-----------------------PDVITPNGLNVKKFSAVH-------EFQNLH-- 298 (692)
T ss_pred hhhhhhhHHHHHHHHHHHHHhc-C-----------------------CCeeCCCCcceeehhHHH-------HHHHHH--
Confidence 9998888887443332222111 0 235779999999886433 111111
Q ss_pred CCCCCCCCcchhhHhhhhhc------cCCCCcEEEEEeCCCC-CCCHHHHHHHHHhcccc---cCCCcE--E-EEEecCC
Q 001492 456 TDGSSPKAIPAIWSDVMRFL------TNPHKPMILALSRPDP-KKNITTLLKAFGECRPL---RELANL--T-LIMGNRD 522 (1067)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~Il~vgRld~-~Kgi~~ll~A~~~l~~l---~~~~~l--~-lIvG~~~ 522 (1067)
......+...++..+ ...+..+++..||.+. .||-+.+|++++++.-+ ...+.. . +|++...
T Consensus 299 -----A~~KekIndFVRGHF~GhlDFdLdkTlyfFiAGRYEf~NKGaDmFiEsLaRLN~~Lk~~~s~~TVVaFlImPakt 373 (692)
T KOG3742|consen 299 -----AQKKEKINDFVRGHFHGHLDFDLDKTLYFFIAGRYEFSNKGADMFIESLARLNYLLKVSGSPKTVVAFLIMPAKT 373 (692)
T ss_pred -----HHHHHHHHHHhhhhccccccccccceEEEEEeeeeeeccCchHHHHHHHHHhHHHHeecCCCceEEEEEEeecCC
Confidence 011222333333321 1233456777899884 79999999999988532 112221 1 3554321
Q ss_pred ---Chhhhhccc---------hHHHHH-----------------------------------------------------
Q 001492 523 ---DIEEMSSGN---------ASVLIT----------------------------------------------------- 537 (1067)
Q Consensus 523 ---~~~~l~~~~---------~~~~~~----------------------------------------------------- 537 (1067)
..+.++.+. .++.+.
T Consensus 374 N~FnVesLkgqAv~kqL~dtv~~Vk~~~Gkrifd~~l~g~lPd~~ell~~~d~v~lKr~i~a~~r~slPPv~THNm~dDa 453 (692)
T KOG3742|consen 374 NSFNVESLKGQAVRKQLWDTVNEVKEKVGKRIFDHCLRGELPDLDELLDKDDLVLLKRCIFALQRQSLPPVCTHNMIDDA 453 (692)
T ss_pred CccchhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCChHHhhChhHHHHHHHHHHHhccCCCCCceeccccccc
Confidence 112221110 011000
Q ss_pred ---HHHHHHhcCCC----C--cEEeCC-CCC------CCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEE
Q 001492 538 ---VLKLIDKYDLY----G--QVAYPK-HHK------QYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVA 601 (1067)
Q Consensus 538 ---i~~l~~~~~l~----~--~V~~~g-~~~------~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVa 601 (1067)
|+..+.+.+|. + +|.|++ +++ .-|..++.+.| .+.|+||.+||+|.|..|.-.+|+|-|+
T Consensus 454 ~DpiL~~iRr~~LFN~~~DRVKvifHPEFLss~sPllglDYeeFVRGC----HLGVFPSYYEPWGYTPAECTVMGiPSvt 529 (692)
T KOG3742|consen 454 NDPILSSIRRIGLFNSPSDRVKVIFHPEFLSSTSPLLGLDYEEFVRGC----HLGVFPSYYEPWGYTPAECTVMGIPSVT 529 (692)
T ss_pred cchHHHHhHhhhcccCcccceEEEecHHHhccCCCCcCCCHHHHhccc----cccccccccCCCCCCchheEEecccccc
Confidence 12222222221 1 233432 221 23778889999 9999999999999999999999999999
Q ss_pred cCCCCch----hhhccC-CceEEe-C------CCCHHHHHHHHHHhhcCHHHHHHHHHHHH-HHHH-cCCHHHHHHHHHH
Q 001492 602 TKNGGPV----DIHRAL-NNGLLV-D------PHDQQAIADALLKLVSEKNLWVECRKNGW-KNIH-LFSWPEHCRTYLT 667 (1067)
Q Consensus 602 t~~Gg~~----eiv~~~-~~Gllv-~------p~d~~~la~aL~~ll~d~~~~~~~~~~~~-~~~~-~fsw~~~a~~~l~ 667 (1067)
|+..|.. |.|++. .-|+++ + .++.+++++-+...... ..+|++-++.+ ++.. ..+|..+...|.+
T Consensus 530 TNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m~~F~~q-sRRQRIiqRNrtErLSdLLDWk~lG~~Y~~ 608 (692)
T KOG3742|consen 530 TNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFMYEFCKQ-SRRQRIIQRNRTERLSDLLDWKYLGRYYRK 608 (692)
T ss_pred ccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHHHHHHHHHH-HHHHHHHHhcchhhHHHHHhHHHHhHHHHH
Confidence 9987764 344332 247655 2 23556677776666543 34555444333 4443 7899998888877
Q ss_pred HHHHhHhc
Q 001492 668 RVAACRMR 675 (1067)
Q Consensus 668 ~~~~~~~~ 675 (1067)
.=.-.+.+
T Consensus 609 aR~laL~r 616 (692)
T KOG3742|consen 609 ARHLALSR 616 (692)
T ss_pred HHHHHHHh
Confidence 65544443
|
|
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.1e-06 Score=87.02 Aligned_cols=128 Identities=20% Similarity=0.302 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCccccccc
Q 001492 194 IKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKELLW 273 (1067)
Q Consensus 194 ~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k~~l~ 273 (1067)
..++.++++.|.+.| |+|+++|.....+. ....+++.+++++.+.. ..+
T Consensus 10 ~~~~~~~~~~L~~~g--~~V~ii~~~~~~~~----------------------~~~~~~i~~~~~~~~~k-------~~~ 58 (139)
T PF13477_consen 10 STFIYNLAKELKKRG--YDVHIITPRNDYEK----------------------YEIIEGIKVIRLPSPRK-------SPL 58 (139)
T ss_pred HHHHHHHHHHHHHCC--CEEEEEEcCCCchh----------------------hhHhCCeEEEEecCCCC-------ccH
Confidence 357899999999999 99999998432111 11235888888864321 123
Q ss_pred chhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCch-hHHHHHHHhcCC-CcEEEEeCCCchhhHHHHHhhCC
Q 001492 274 PYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADA-GDSAALLSGALN-VPMVLTGHSLGRNKLEQLLKQGR 351 (1067)
Q Consensus 274 ~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a-~~~a~~l~~~~g-iP~V~t~H~l~~~~~~~l~~~g~ 351 (1067)
+++. + .++.+.+.+ .+|||||+|.+.+ +..+.++++..+ +|+|++.|+++.... +.
T Consensus 59 ~~~~-~--------~~l~k~ik~-------~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~~------~~ 116 (139)
T PF13477_consen 59 NYIK-Y--------FRLRKIIKK-------EKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYNS------SK 116 (139)
T ss_pred HHHH-H--------HHHHHHhcc-------CCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeecC------Cc
Confidence 3331 1 122222222 5799999999864 777888888888 999999998643110 00
Q ss_pred CChhhhhhHhHHHHhHHHhhcccccCCEEEeCC
Q 001492 352 QSKEDINSTYKIMRRIEGEELSLDAAELVITST 384 (1067)
Q Consensus 352 ~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S 384 (1067)
..++.+. .++.+++.||.|++.|
T Consensus 117 --------~~~~~~~--~~~~~~k~~~~ii~~~ 139 (139)
T PF13477_consen 117 --------KKKLKKF--IIKFAFKRADKIIVQS 139 (139)
T ss_pred --------hHHHHHH--HHHHHHHhCCEEEEcC
Confidence 0001222 2456789999999875
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.2e-05 Score=93.50 Aligned_cols=263 Identities=17% Similarity=0.150 Sum_probs=150.2
Q ss_pred CCceEEEEcC-CchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEe
Q 001492 304 VWPYVIHGHY-ADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVIT 382 (1067)
Q Consensus 304 ~~pDvIh~h~-~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~ 382 (1067)
.+||+|.+|. ......+++.+..+++|+++.--+.-. .+. .+ ...|++ +-+-|+..++
T Consensus 92 ~~Pd~vlv~GD~~~~la~alaA~~~~IPv~HveaG~rs--------~~~--~e------E~~r~~-----i~~la~l~f~ 150 (365)
T TIGR03568 92 LKPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHGGEVT--------EGA--ID------ESIRHA-----ITKLSHLHFV 150 (365)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHhCCcEEEEECCccC--------CCC--ch------HHHHHH-----HHHHHhhccC
Confidence 5799999987 467778888899999999854333210 010 01 111221 2345678888
Q ss_pred CCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCC-CCCCCCccCCCCCCccccccccccCCCCCCCC
Q 001492 383 STKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPP-GMDFSNVVAQEDTPEVDGELTSLIGGTDGSSP 461 (1067)
Q Consensus 383 ~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPn-GiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1067)
+++...+.+.+ .|+ ...++.++-| ++|.-.......
T Consensus 151 ~t~~~~~~L~~------------------eg~-----~~~~i~~tG~~~iD~l~~~~~~~-------------------- 187 (365)
T TIGR03568 151 ATEEYRQRVIQ------------------MGE-----DPDRVFNVGSPGLDNILSLDLLS-------------------- 187 (365)
T ss_pred CCHHHHHHHHH------------------cCC-----CCCcEEEECCcHHHHHHhhhccC--------------------
Confidence 99877665532 222 2236776644 555432211110
Q ss_pred CCcchhhHhhhhhccCCCCcEEEEEeCC-C--CC---CCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHH
Q 001492 462 KAIPAIWSDVMRFLTNPHKPMILALSRP-D--PK---KNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVL 535 (1067)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~Il~vgRl-d--~~---Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~ 535 (1067)
.......+..++++++++..-.. . .. +.+..+++++..+ . .++.++..+.+. ......
T Consensus 188 -----~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~---~--~~~~vi~P~~~p------~~~~i~ 251 (365)
T TIGR03568 188 -----KEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDEL---N--KNYIFTYPNADA------GSRIIN 251 (365)
T ss_pred -----HHHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHh---c--cCCEEEEeCCCC------CchHHH
Confidence 01112233333344554443332 2 22 3455566666544 1 134445544321 111223
Q ss_pred HHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCC
Q 001492 536 ITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALN 615 (1067)
Q Consensus 536 ~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~ 615 (1067)
..+..+... .++|.+.+.++..++..+++.| +++|-- +-|.. .||.+.|+|+|+ .|.-+|.+..+.
T Consensus 252 ~~i~~~~~~---~~~v~l~~~l~~~~~l~Ll~~a----~~vitd----SSggi-~EA~~lg~Pvv~--l~~R~e~~~~g~ 317 (365)
T TIGR03568 252 EAIEEYVNE---HPNFRLFKSLGQERYLSLLKNA----DAVIGN----SSSGI-IEAPSFGVPTIN--IGTRQKGRLRAD 317 (365)
T ss_pred HHHHHHhcC---CCCEEEECCCChHHHHHHHHhC----CEEEEc----ChhHH-HhhhhcCCCEEe--ecCCchhhhhcC
Confidence 334343221 4689999999999999999999 887732 22333 899999999995 456778877788
Q ss_pred ceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHH
Q 001492 616 NGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYLT 667 (1067)
Q Consensus 616 ~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~ 667 (1067)
|.++| +.|+++|.+++.+++ ++..++.+ ... ..|-....+++..+
T Consensus 318 nvl~v-g~~~~~I~~a~~~~~-~~~~~~~~-----~~~~~pygdg~as~rI~~ 363 (365)
T TIGR03568 318 SVIDV-DPDKEEIVKAIEKLL-DPAFKKSL-----KNVKNPYGDGNSSERIIE 363 (365)
T ss_pred eEEEe-CCCHHHHHHHHHHHh-ChHHHHHH-----hhCCCCCCCChHHHHHHH
Confidence 88888 568999999999954 44433332 112 24544455555544
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.49 E-value=2.6e-07 Score=93.94 Aligned_cols=69 Identities=10% Similarity=0.142 Sum_probs=57.9
Q ss_pred EEEeCCCCCCCCc-----------hhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHH---HHHHhc-----CCCC
Q 001492 780 IALDCYDSKGAPD-----------KKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETI---EFLNSM-----KIEA 840 (1067)
Q Consensus 780 ia~DiDGTLl~~~-----------~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~---~~l~~l-----~i~~ 840 (1067)
+++|+||||++++ ..+++.+++++++++++| + .|+++|||++..+. +++..+ +++
T Consensus 2 VisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G----~-~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp- 75 (157)
T smart00775 2 VISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNG----Y-KILYLTARPIGQADRTRSYLSQIKQDGHNLP- 75 (157)
T ss_pred EEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcC----C-eEEEEcCCcHHHHHHHHHHHHHhhhccccCC-
Confidence 5679999988887 688999999999999997 6 79999999999884 788882 343
Q ss_pred CCCCEEEEcCCceEEe
Q 001492 841 NEFDALICSSGGEMYY 856 (1067)
Q Consensus 841 ~~~d~~I~~nGa~I~~ 856 (1067)
++++||+||+.++.
T Consensus 76 --~g~li~~~g~~~~~ 89 (157)
T smart00775 76 --HGPVLLSPDRLFAA 89 (157)
T ss_pred --CceEEEcCCcchhh
Confidence 46899999998753
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.8e-06 Score=94.81 Aligned_cols=71 Identities=13% Similarity=0.135 Sum_probs=59.1
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECC---CCHHHHHHHHHhcCCCCCCCCEEEEcCCceEE
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTA---MPVSETIEFLNSMKIEANEFDALICSSGGEMY 855 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTG---R~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~ 855 (1067)
.|++|+||||++.++.++ .+.++|++|+++| + .|+++|| |+...+...++.+|++. .+|-+|+++|+.+.
T Consensus 3 ~~~~D~DGtl~~~~~~i~-~a~~~l~~l~~~g----~-~~~~~Tnn~~r~~~~~~~~l~~~g~~~-~~~~iit~~~~~~~ 75 (249)
T TIGR01457 3 GYLIDLDGTMYKGKERIP-EAETFVHELQKRD----I-PYLFVTNNSTRTPESVAEMLASFDIPA-TLETVFTASMATAD 75 (249)
T ss_pred EEEEeCCCceEcCCeeCc-CHHHHHHHHHHCC----C-eEEEEeCCCCCCHHHHHHHHHHcCCCC-ChhhEeeHHHHHHH
Confidence 445599999888766665 7899999999997 6 7999985 99999999999999874 56789999988754
Q ss_pred e
Q 001492 856 Y 856 (1067)
Q Consensus 856 ~ 856 (1067)
|
T Consensus 76 ~ 76 (249)
T TIGR01457 76 Y 76 (249)
T ss_pred H
Confidence 4
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=98.35 E-value=3.4e-05 Score=86.24 Aligned_cols=98 Identities=22% Similarity=0.299 Sum_probs=73.2
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCC
Q 001492 480 KPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQ 559 (1067)
Q Consensus 480 ~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~ 559 (1067)
+.+++++|..++.+....+++++..+ ....++.+|+|.+... ..++.+.+... +++.+.++ .
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~i~vv~G~~~~~----------~~~l~~~~~~~---~~i~~~~~--~ 232 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAES---QINISITLVTGSSNPN----------LDELKKFAKEY---PNIILFID--V 232 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhcc---ccCceEEEEECCCCcC----------HHHHHHHHHhC---CCEEEEeC--H
Confidence 45789999999977677888888765 2334566788876321 23444555443 47888777 4
Q ss_pred CCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCC
Q 001492 560 YDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKN 604 (1067)
Q Consensus 560 ~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~ 604 (1067)
++++++|+.| |++|.+ .|.|+.|++++|+|+|+-..
T Consensus 233 ~~m~~lm~~a----Dl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 233 ENMAELMNEA----DLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred HHHHHHHHHC----CEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 6899999999 999975 57999999999999998654
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.5e-06 Score=84.82 Aligned_cols=54 Identities=15% Similarity=0.252 Sum_probs=46.7
Q ss_pred EEEeCCCCCCCCch--------hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCC
Q 001492 780 IALDCYDSKGAPDK--------KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838 (1067)
Q Consensus 780 ia~DiDGTLl~~~~--------~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i 838 (1067)
+++|+||||...+. .+.+.+.+.|+.|+++| + .++|+|||....+..+++.+++
T Consensus 2 ~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g----~-~i~ivS~~~~~~~~~~~~~~~~ 63 (139)
T cd01427 2 VLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEKG----I-KLALATNKSRREVLELLEELGL 63 (139)
T ss_pred eEEccCCceEccCccccccccCCcCcCHHHHHHHHHHCC----C-eEEEEeCchHHHHHHHHHHcCC
Confidence 45699999877654 67789999999999986 6 7999999999999999999776
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.4e-05 Score=80.67 Aligned_cols=198 Identities=16% Similarity=0.185 Sum_probs=110.8
Q ss_pred eEEEEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCC-CCCCEEEEcCCceE
Q 001492 776 RLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEA-NEFDALICSSGGEM 854 (1067)
Q Consensus 776 klllia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~-~~~d~~I~~nGa~I 854 (1067)
-|+++ |.||||..+..+++++..+.|+.+++. + .+.++-|-.++-+.+.+ |-+. ..||+.-..||-.-
T Consensus 12 ~l~lf--dvdgtLt~~r~~~~~e~~~~l~~lr~~-----v-~ig~VggsDl~k~~eql---G~~Vl~~fDY~F~ENGl~~ 80 (252)
T KOG3189|consen 12 TLCLF--DVDGTLTPPRQKVTPEMLEFLQKLRKK-----V-TIGFVGGSDLSKQQEQL---GDNVLEEFDYVFSENGLVA 80 (252)
T ss_pred eEEEE--ecCCccccccccCCHHHHHHHHHHhhh-----e-EEEEeecHHHHHHHHHh---chhHHhhhcccccCCCeeE
Confidence 34455 999999988889999999999999877 6 78888888666555444 4443 56999999999776
Q ss_pred EecCCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCCchH-
Q 001492 855 YYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKAR- 933 (1067)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~- 933 (1067)
|..+ .....+....++-.....+.+...+..+.......+ ...+++--.. -..++-.-++.....
T Consensus 81 yk~g-------k~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiK-----RGtFiEFRNg--MiNvsPIGR~cs~EER 146 (252)
T KOG3189|consen 81 YKGG-------KLLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIK-----RGTFIEFRNG--MINVSPIGRNCSQEER 146 (252)
T ss_pred eeCC-------cchhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCccc-----ccceEEecCC--ceeccccccccCHHHH
Confidence 6543 333444444444221111111111111111111111 1111111000 001111001111000
Q ss_pred -----------HHHHHHHHHHhcCCcEEEEEeeCC-eeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecC----CCCC
Q 001492 934 -----------RIDDLRQKLRMRGLRCHPMYCRNS-TRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGE----SGDT 997 (1067)
Q Consensus 934 -----------~~~el~~~L~~~~~~~~v~~s~~~-~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGD----s~N~ 997 (1067)
.-+.+...|+.......+++|-++ -.+||.|.|-+|-.-|++|-.. |.+ +|-|||| ++|
T Consensus 147 ~eF~e~Dkk~~iR~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d-gf~---~IhFFGDkT~~GGN- 221 (252)
T KOG3189|consen 147 NEFEELDKKHKIREKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD-GFD---TIHFFGDKTMPGGN- 221 (252)
T ss_pred HHHHHhhhhhhhHHHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc-CCc---eEEEeccccCCCCC-
Confidence 011222233333233445555543 4699999999999999998776 666 6777999 689
Q ss_pred Chhhhhc
Q 001492 998 DYEELIS 1004 (1067)
Q Consensus 998 D~~eML~ 1004 (1067)
| .+.|.
T Consensus 222 D-yEIf~ 227 (252)
T KOG3189|consen 222 D-YEIFA 227 (252)
T ss_pred c-ceeee
Confidence 9 78876
|
|
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=98.27 E-value=0.00025 Score=80.69 Aligned_cols=66 Identities=24% Similarity=0.233 Sum_probs=49.7
Q ss_pred CHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC---chhhhccCCceEEeCCCCHHHHHHHHHHhhc
Q 001492 561 DVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG---PVDIHRALNNGLLVDPHDQQAIADALLKLVS 637 (1067)
Q Consensus 561 dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg---~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~ 637 (1067)
+...++..| |++| -+-|....||+..|+|.|++..|- .-+.+. ..|+++.-.|++++.+.+.+.+.
T Consensus 241 d~~~Ll~~a----~l~I-----g~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~--~~Gll~~~~~~~ei~~~v~~~~~ 309 (335)
T PF04007_consen 241 DGLDLLYYA----DLVI-----GGGGTMAREAALLGTPAISCFPGKLLAVDKYLI--EKGLLYHSTDPDEIVEYVRKNLG 309 (335)
T ss_pred CHHHHHHhc----CEEE-----eCCcHHHHHHHHhCCCEEEecCCcchhHHHHHH--HCCCeEecCCHHHHHHHHHHhhh
Confidence 556888889 8988 345777899999999999987653 323333 35889988999999986666544
|
They are found in archaea and some bacteria and have no known function. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.4e-05 Score=85.38 Aligned_cols=62 Identities=13% Similarity=0.120 Sum_probs=50.2
Q ss_pred eEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCcccchhhhhccc
Q 001492 959 RMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTT 1027 (1067)
Q Consensus 959 ~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~~~~~~~~a~ 1027 (1067)
.+-.+-.+-+|..+++.++..+|++++++++ +|||.| | ++||+.+|++||.. +. ++++.+++
T Consensus 135 v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a-~gDs~n-D-lpml~~ag~~ia~n-~~---~~l~~~a~ 196 (212)
T COG0560 135 VVGPICDGEGKAKALRELAAELGIPLEETVA-YGDSAN-D-LPMLEAAGLPIAVN-PK---PKLRALAD 196 (212)
T ss_pred eeeeecCcchHHHHHHHHHHHcCCCHHHeEE-EcCchh-h-HHHHHhCCCCeEeC-cC---HHHHHHHH
Confidence 3444445568999999999999999999999 999999 9 99999999999884 44 33444443
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=98.09 E-value=0.0012 Score=79.21 Aligned_cols=94 Identities=15% Similarity=0.051 Sum_probs=59.8
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc----hhhhcc-CCceEEeC--
Q 001492 549 GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----VDIHRA-LNNGLLVD-- 621 (1067)
Q Consensus 549 ~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~----~eiv~~-~~~Gllv~-- 621 (1067)
+++.+.++.|+.+ ++..++ .+.||.- +-..+++||+++|+|+|+-...+- ...+.+ ...|+-+.
T Consensus 323 ~~~~v~~w~pQ~~---iL~h~~--v~~fvtH----gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~ 393 (459)
T PLN02448 323 DMGLVVPWCDQLK---VLCHSS--VGGFWTH----CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKRE 393 (459)
T ss_pred CCEEEeccCCHHH---HhccCc--cceEEec----CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecc
Confidence 3566778887665 444550 1335532 334589999999999999776442 223332 24566663
Q ss_pred -----CCCHHHHHHHHHHhhcCH-HHHHHHHHHHHH
Q 001492 622 -----PHDQQAIADALLKLVSEK-NLWVECRKNGWK 651 (1067)
Q Consensus 622 -----p~d~~~la~aL~~ll~d~-~~~~~~~~~~~~ 651 (1067)
.-+.+++++++.+++.++ +.-.++++++.+
T Consensus 394 ~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~ 429 (459)
T PLN02448 394 VGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKE 429 (459)
T ss_pred cccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence 136789999999999875 444556555554
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.06 E-value=4.9e-05 Score=87.56 Aligned_cols=251 Identities=20% Similarity=0.208 Sum_probs=133.1
Q ss_pred CCceEEEEcCC-chhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEe
Q 001492 304 VWPYVIHGHYA-DAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVIT 382 (1067)
Q Consensus 304 ~~pDvIh~h~~-~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~ 382 (1067)
.+||+|.++.- ....++++.+..+++|+++---++ +.. -...|. .+. ..|.. +-+-|+..+|
T Consensus 66 ~~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaGl-Rs~---d~~~g~-----~de---~~R~~-----i~~la~lhf~ 128 (346)
T PF02350_consen 66 EKPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAGL-RSG---DRTEGM-----PDE---INRHA-----IDKLAHLHFA 128 (346)
T ss_dssp HT-SEEEEETTSHHHHHHHHHHHHTT-EEEEES------S----TTSST-----THH---HHHHH-----HHHH-SEEEE
T ss_pred cCCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCCC-Ccc---ccCCCC-----chh---hhhhh-----hhhhhhhhcc
Confidence 46999998864 567778888999999955443332 100 001111 111 22222 3466899999
Q ss_pred CCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCC-CCCCCCccCCCCCCccccccccccCCCCCCCC
Q 001492 383 STKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPP-GMDFSNVVAQEDTPEVDGELTSLIGGTDGSSP 461 (1067)
Q Consensus 383 ~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPn-GiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1067)
+|+...+.+.+. |+ +..+|.++-+ ++|.-.......
T Consensus 129 ~t~~~~~~L~~~------------------G~-----~~~rI~~vG~~~~D~l~~~~~~~-------------------- 165 (346)
T PF02350_consen 129 PTEEARERLLQE------------------GE-----PPERIFVVGNPGIDALLQNKEEI-------------------- 165 (346)
T ss_dssp SSHHHHHHHHHT------------------T-------GGGEEE---HHHHHHHHHHHTT--------------------
T ss_pred CCHHHHHHHHhc------------------CC-----CCCeEEEEChHHHHHHHHhHHHH--------------------
Confidence 999888776432 33 2247877754 344321111000
Q ss_pred CCcchhhHhhhhhccCCCCcEEEEEeCCCCC----CCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHH
Q 001492 462 KAIPAIWSDVMRFLTNPHKPMILALSRPDPK----KNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLIT 537 (1067)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~----Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~ 537 (1067)
.+... ...+.....++++|........ .....+.+++..+.+. .++.+|+.-... +.....
T Consensus 166 --~~~~~--~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~---~~~~vi~~~hn~--------p~~~~~ 230 (346)
T PF02350_consen 166 --EEKYK--NSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER---QNVPVIFPLHNN--------PRGSDI 230 (346)
T ss_dssp --CC-HH--HHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH---TTEEEEEE--S---------HHHHHH
T ss_pred --hhhhh--hHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc---CCCcEEEEecCC--------chHHHH
Confidence 00000 0111112455666555543322 3456777777777532 455554433211 222344
Q ss_pred HHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHH-HHHHcCCCEEEcC-CCCchhhhccCC
Q 001492 538 VLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLI-EAAAHGLPMVATK-NGGPVDIHRALN 615 (1067)
Q Consensus 538 i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~Egfgltll-EAmA~G~PVVat~-~Gg~~eiv~~~~ 615 (1067)
+.+.+.++ +++.+..+++..++..+++.| +++|- -.| .+. ||..+|+|+|.-. .|--++.+..+.
T Consensus 231 i~~~l~~~---~~v~~~~~l~~~~~l~ll~~a----~~vvg-----dSs-GI~eEa~~lg~P~v~iR~~geRqe~r~~~~ 297 (346)
T PF02350_consen 231 IIEKLKKY---DNVRLIEPLGYEEYLSLLKNA----DLVVG-----DSS-GIQEEAPSLGKPVVNIRDSGERQEGRERGS 297 (346)
T ss_dssp HHHHHTT----TTEEEE----HHHHHHHHHHE----SEEEE-----SSH-HHHHHGGGGT--EEECSSS-S-HHHHHTTS
T ss_pred HHHHhccc---CCEEEECCCCHHHHHHHHhcc----eEEEE-----cCc-cHHHHHHHhCCeEEEecCCCCCHHHHhhcc
Confidence 55555555 389999999999999999999 77763 335 677 9999999999985 455556655554
Q ss_pred ceEEeCCCCHHHHHHHHHHhhcCHHHHHH
Q 001492 616 NGLLVDPHDQQAIADALLKLVSEKNLWVE 644 (1067)
Q Consensus 616 ~Gllv~p~d~~~la~aL~~ll~d~~~~~~ 644 (1067)
..+|. .|.++|.++|.+++.+++.+.+
T Consensus 298 -nvlv~-~~~~~I~~ai~~~l~~~~~~~~ 324 (346)
T PF02350_consen 298 -NVLVG-TDPEAIIQAIEKALSDKDFYRK 324 (346)
T ss_dssp -EEEET-SSHHHHHHHHHHHHH-HHHHHH
T ss_pred -eEEeC-CCHHHHHHHHHHHHhChHHHHh
Confidence 44576 7999999999999998554444
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.003 Score=76.58 Aligned_cols=164 Identities=15% Similarity=0.114 Sum_probs=101.7
Q ss_pred hhhhhccCCC-CcEEEEEeCCCC-----CCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHH
Q 001492 470 DVMRFLTNPH-KPMILALSRPDP-----KKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLID 543 (1067)
Q Consensus 470 ~~~~~~~~~~-~~~Il~vgRld~-----~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~ 543 (1067)
++..|..... .+++++.|.... .+-+..+++||+.+. ..+.+-.++ +.. .
T Consensus 286 ~l~~fl~~~~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~-----~~viw~~~~-~~~---------------~--- 341 (507)
T PHA03392 286 YLEEFLNNSTNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-----YNVLWKYDG-EVE---------------A--- 341 (507)
T ss_pred HHHHHHhcCCCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCC-----CeEEEEECC-CcC---------------c---
Confidence 3444443333 467788888642 334577778887662 122222222 110 0
Q ss_pred hcCCCCcEEeCCCCCCCCHHHHHH--HhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC----chhhhccCCce
Q 001492 544 KYDLYGQVAYPKHHKQYDVPEIYR--LAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRALNNG 617 (1067)
Q Consensus 544 ~~~l~~~V~~~g~~~~~dl~~ly~--~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg----~~eiv~~~~~G 617 (1067)
.++.++|.+.+++|+. ++++ .+ ++||.= |-..++.||+.+|+|+|.-...+ ....+...+.|
T Consensus 342 -~~~p~Nv~i~~w~Pq~---~lL~hp~v----~~fItH----GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G 409 (507)
T PHA03392 342 -INLPANVLTQKWFPQR---AVLKHKNV----KAFVTQ----GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIG 409 (507)
T ss_pred -ccCCCceEEecCCCHH---HHhcCCCC----CEEEec----CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcE
Confidence 1345789999999875 4553 35 788843 44578999999999999987543 23344455678
Q ss_pred EEeCCC--CHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Q 001492 618 LLVDPH--DQQAIADALLKLVSEKNLWVECRKNGWKNIH-LFSWPEHCRTYLTRV 669 (1067)
Q Consensus 618 llv~p~--d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~-~fsw~~~a~~~l~~~ 669 (1067)
+.++.. +.+++.++|.+++++|..++.+.+-+..... ..+-.+-+-.+.+.+
T Consensus 410 ~~l~~~~~t~~~l~~ai~~vl~~~~y~~~a~~ls~~~~~~p~~~~~~av~~iE~v 464 (507)
T PHA03392 410 RALDTVTVSAAQLVLAIVDVIENPKYRKNLKELRHLIRHQPMTPLHKAIWYTEHV 464 (507)
T ss_pred EEeccCCcCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 888653 6689999999999998876666555544432 344444444554443
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=98.00 E-value=4.8e-05 Score=89.27 Aligned_cols=185 Identities=12% Similarity=0.101 Sum_probs=120.4
Q ss_pred hHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCC
Q 001492 468 WSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDL 547 (1067)
Q Consensus 468 ~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l 547 (1067)
...+..|..+.+..+++++.++ .|=-+..++++.++ |+..|+-.|++...+.. -...+.+.+.+.|+
T Consensus 273 ~~~R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~I--L~~vP~S~L~L~~~~~~---------~~~~l~~~~~~~Gv 339 (468)
T PF13844_consen 273 VTTRAQYGLPEDAVVFGSFNNL--FKISPETLDLWARI--LKAVPNSRLWLLRFPAS---------GEARLRRRFAAHGV 339 (468)
T ss_dssp EEETGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHH--HHHSTTEEEEEEETSTT---------HHHHHHHHHHHTTS
T ss_pred ccCHHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHH--HHhCCCcEEEEeeCCHH---------HHHHHHHHHHHcCC
Confidence 4456677777777677777775 57778899999888 56778877755443321 12567778888887
Q ss_pred C-CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCch-----hhhcc-CCceEEe
Q 001492 548 Y-GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPV-----DIHRA-LNNGLLV 620 (1067)
Q Consensus 548 ~-~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~-----eiv~~-~~~Gllv 620 (1067)
. +++.|.+..+.++....|+.+ ||+|=|..+-| +.|.+||+.+|+|||+-.-.... .++.. |-.-++.
T Consensus 340 ~~~Ri~f~~~~~~~ehl~~~~~~----DI~LDT~p~nG-~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA 414 (468)
T PF13844_consen 340 DPDRIIFSPVAPREEHLRRYQLA----DICLDTFPYNG-GTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIA 414 (468)
T ss_dssp -GGGEEEEE---HHHHHHHGGG-----SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-
T ss_pred ChhhEEEcCCCCHHHHHHHhhhC----CEEeeCCCCCC-cHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcC
Confidence 6 579998887777777888889 99998754433 78999999999999986532221 12222 2223333
Q ss_pred CCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-H--cCCHHHHHHHHHHHHHHh
Q 001492 621 DPHDQQAIADALLKLVSEKNLWVECRKNGWKNI-H--LFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 621 ~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~--~fsw~~~a~~~l~~~~~~ 672 (1067)
.|.++..+.-.+|.+|++.++.+++.-++.. + .|+-..+++.+++.|+++
T Consensus 415 --~s~~eYv~~Av~La~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m 467 (468)
T PF13844_consen 415 --DSEEEYVEIAVRLATDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM 467 (468)
T ss_dssp --SSHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence 4789999999999999999999999998776 3 799999999999999764
|
|
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.0015 Score=73.46 Aligned_cols=124 Identities=14% Similarity=0.148 Sum_probs=102.4
Q ss_pred CCCCcEEeCCCCCC-CCHHHHHHHhhcCCcEEEecCCC---C-C--CCHHHHHHHHcCCCEEEcCCCCchhhhccCCceE
Q 001492 546 DLYGQVAYPKHHKQ-YDVPEIYRLAAKTKGVFINPALV---E-P--FGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGL 618 (1067)
Q Consensus 546 ~l~~~V~~~g~~~~-~dl~~ly~~A~~~~dV~v~ps~~---E-g--fgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gl 618 (1067)
.+.+++.+.|+.+. ..++..++.- +++++-+.. + + +..-+.|+++||.|.++.-.-+..-.+.+|..=+
T Consensus 234 ~~~~~~~yIg~~~~~~~v~~~~~~~----~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~i 309 (373)
T COG4641 234 TWEPNVQYIGYYNPKDGVPNAFKRD----DVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDII 309 (373)
T ss_pred cccchhhhhhccCccchhhhccccc----ceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheE
Confidence 35667888888877 7788888888 888876542 2 2 3778999999999999988887777777766544
Q ss_pred EeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHhHhc
Q 001492 619 LVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYLTRVAACRMR 675 (1067)
Q Consensus 619 lv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~~~~ 675 (1067)
+. .|..++.+.+..++..++.++++.+.+.+.+ ..|+.++-+.++++.+..+..+
T Consensus 310 v~--~d~kdl~~~~~yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~sI~~r 365 (373)
T COG4641 310 VY--QDSKDLKEKLKYLLNHPDERKEIAECAYERVLARHTYEERIFKLLNEIASINIR 365 (373)
T ss_pred Ee--cCHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHh
Confidence 44 5999999999999999999999999999999 4899999999999998886655
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=97.95 E-value=2e-05 Score=86.18 Aligned_cols=70 Identities=16% Similarity=0.231 Sum_probs=56.8
Q ss_pred EEEEeCCCCCCCCchhh---HHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEE
Q 001492 779 VIALDCYDSKGAPDKKM---IQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMY 855 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i---~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~ 855 (1067)
+|++|+||||.++++++ ++.+.++|++|+++| + .++|+|+++...+...++.+|+. .-|+.+|| +|....
T Consensus 128 vIvFDLDgTLi~~~~~v~irdPgV~EaL~~LkekG----i-kLaIaTS~~Re~v~~~L~~lGLd-~YFdvIIs-~Gdv~~ 200 (301)
T TIGR01684 128 VVVFDLDSTLITDEEPVRIRDPRIYDSLTELKKRG----C-ILVLWSYGDRDHVVESMRKVKLD-RYFDIIIS-GGHKAE 200 (301)
T ss_pred EEEEecCCCCcCCCCccccCCHHHHHHHHHHHHCC----C-EEEEEECCCHHHHHHHHHHcCCC-cccCEEEE-CCcccc
Confidence 55669999998887765 699999999999997 7 79999999999999999999986 23554544 565543
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=97.95 E-value=2.2e-05 Score=76.24 Aligned_cols=56 Identities=11% Similarity=0.151 Sum_probs=44.1
Q ss_pred EEEEeCCCCCCCCch------hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHH---------------HHHHHHHhcC
Q 001492 779 VIALDCYDSKGAPDK------KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVS---------------ETIEFLNSMK 837 (1067)
Q Consensus 779 lia~DiDGTLl~~~~------~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~---------------~~~~~l~~l~ 837 (1067)
+|++|+||||++.+. .+.+.++++|++++++| + .|+++|||+.. .+..||...+
T Consensus 3 ~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G----~-~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ 77 (126)
T TIGR01689 3 RLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALG----F-EIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHN 77 (126)
T ss_pred EEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCC----C-EEEEECCCCchhhhccccccchhhHHHHHHHHHHcC
Confidence 456699999876432 35678889999998886 6 79999999876 4568899988
Q ss_pred CC
Q 001492 838 IE 839 (1067)
Q Consensus 838 i~ 839 (1067)
++
T Consensus 78 ip 79 (126)
T TIGR01689 78 VP 79 (126)
T ss_pred CC
Confidence 86
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.0008 Score=76.29 Aligned_cols=274 Identities=16% Similarity=0.160 Sum_probs=170.9
Q ss_pred CCceEEEEcCC-chhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCC-hhhhhhHhHHHHhHHHhhcccccCCEEE
Q 001492 304 VWPYVIHGHYA-DAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQS-KEDINSTYKIMRRIEGEELSLDAAELVI 381 (1067)
Q Consensus 304 ~~pDvIh~h~~-~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~-~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi 381 (1067)
.+||+|..|.- .+..++++.+...++|+.+---++-. +... .++ +.|++ +-.-|+.-+
T Consensus 91 ~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt---------~~~~~PEE------~NR~l-----~~~~S~~hf 150 (383)
T COG0381 91 EKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRT---------GDLYFPEE------INRRL-----TSHLSDLHF 150 (383)
T ss_pred hCCCEEEEeCCcchHHHHHHHHHHhCCceEEEeccccc---------CCCCCcHH------HHHHH-----HHHhhhhhc
Confidence 67999998875 45666688888889999887666511 1111 111 12222 345578889
Q ss_pred eCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCC-CCCCccCCCCCCccccccccccCCCCCCC
Q 001492 382 TSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGM-DFSNVVAQEDTPEVDGELTSLIGGTDGSS 460 (1067)
Q Consensus 382 ~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGi-D~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1067)
++|....+.+.+ .|+ +..+|.|+-|.+ |.-....... .
T Consensus 151 apte~ar~nLl~------------------EG~-----~~~~IfvtGnt~iDal~~~~~~~--------~---------- 189 (383)
T COG0381 151 APTEIARKNLLR------------------EGV-----PEKRIFVTGNTVIDALLNTRDRV--------L---------- 189 (383)
T ss_pred CChHHHHHHHHH------------------cCC-----CccceEEeCChHHHHHHHHHhhh--------c----------
Confidence 999887776633 233 334788887753 2211110000 0
Q ss_pred CCCcchhhHhhhhhccCCCCcEEEEEe-CCCCC-CCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHH
Q 001492 461 PKAIPAIWSDVMRFLTNPHKPMILALS-RPDPK-KNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITV 538 (1067)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~Il~vg-Rld~~-Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i 538 (1067)
.... ....+....++++|+..+ |-.-. +++..+++|+.++. ...+++.+|....+.. .+.++
T Consensus 190 --~~~~---~~~~~~~~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~--~~~~~~~viyp~H~~~---------~v~e~ 253 (383)
T COG0381 190 --EDSK---ILAKGLDDKDKKYILVTAHRRENVGEPLEEICEALREIA--EEYPDVIVIYPVHPRP---------RVREL 253 (383)
T ss_pred --cchh---hHHhhhccccCcEEEEEcchhhcccccHHHHHHHHHHHH--HhCCCceEEEeCCCCh---------hhhHH
Confidence 0000 000112334555655544 44333 89999999999885 4457888888877631 12222
Q ss_pred HHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCC-CchhhhccCCce
Q 001492 539 LKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNG-GPVDIHRALNNG 617 (1067)
Q Consensus 539 ~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~G-g~~eiv~~~~~G 617 (1067)
. ...++-.++|.+...+...+...++..| .++++ -.|-..-||-..|+||+.-..+ .-+|-+.. ..-
T Consensus 254 ~--~~~L~~~~~v~li~pl~~~~f~~L~~~a-----~~ilt----DSGgiqEEAp~lg~Pvl~lR~~TERPE~v~a-gt~ 321 (383)
T COG0381 254 V--LKRLKNVERVKLIDPLGYLDFHNLMKNA-----FLILT----DSGGIQEEAPSLGKPVLVLRDTTERPEGVEA-GTN 321 (383)
T ss_pred H--HHHhCCCCcEEEeCCcchHHHHHHHHhc-----eEEEe----cCCchhhhHHhcCCcEEeeccCCCCccceec-Cce
Confidence 2 3566666789999999999999999999 45555 3466778999999999986643 33455543 345
Q ss_pred EEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 001492 618 LLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAA 671 (1067)
Q Consensus 618 llv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~ 671 (1067)
.+|. .|.+.+.+++.+++++++..++|++..- .|.=...++++.+.+..
T Consensus 322 ~lvg-~~~~~i~~~~~~ll~~~~~~~~m~~~~n----pYgdg~as~rIv~~l~~ 370 (383)
T COG0381 322 ILVG-TDEENILDAATELLEDEEFYERMSNAKN----PYGDGNASERIVEILLN 370 (383)
T ss_pred EEeC-ccHHHHHHHHHHHhhChHHHHHHhcccC----CCcCcchHHHHHHHHHH
Confidence 6665 4789999999999999998887754322 45444455566655553
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00028 Score=77.40 Aligned_cols=65 Identities=8% Similarity=0.022 Sum_probs=49.3
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHH---HHHhcCCCCCCCCEEEEcC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIE---FLNSMKIEANEFDALICSS 850 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~---~l~~l~i~~~~~d~~I~~n 850 (1067)
+|++|+||||.+.+ ++.+.+.++|++|+++| + .|+++|+|+...... .|..+|++. +.+-++++.
T Consensus 3 ~v~~DlDGtL~~~~-~~~p~a~~~l~~L~~~g----~-~~~~~Tn~~~~~~~~~~~~l~~~G~~~-~~~~i~ts~ 70 (248)
T PRK10444 3 NVICDIDGVLMHDN-VAVPGAAEFLHRILDKG----L-PLVLLTNYPSQTGQDLANRFATAGVDV-PDSVFYTSA 70 (248)
T ss_pred EEEEeCCCceEeCC-eeCccHHHHHHHHHHCC----C-eEEEEeCCCCCCHHHHHHHHHHcCCCC-CHhhEecHH
Confidence 45559999988875 67889999999999997 6 799999998865544 455567763 355566653
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.028 Score=67.03 Aligned_cols=94 Identities=17% Similarity=0.113 Sum_probs=60.9
Q ss_pred cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC----chhh-hccCCceEEeCC--
Q 001492 550 QVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG----PVDI-HRALNNGLLVDP-- 622 (1067)
Q Consensus 550 ~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg----~~ei-v~~~~~Gllv~p-- 622 (1067)
.+.+.++.|+.+ +++.. ..+.||.= +--++++||+++|+|+|+-..-+ ...+ +....-|+.++.
T Consensus 312 g~~v~~W~PQ~~---iL~H~--~v~~FvtH----cG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~ 382 (442)
T PLN02208 312 GVVWGGWVQQPL---ILDHP--SIGCFVNH----CGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREK 382 (442)
T ss_pred CcEeeccCCHHH---HhcCC--ccCeEEcc----CCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecccc
Confidence 466778888775 45554 11345521 22368999999999999976533 2222 333456777753
Q ss_pred ---CCHHHHHHHHHHhhcCH-HHHHHHHHHHHHH
Q 001492 623 ---HDQQAIADALLKLVSEK-NLWVECRKNGWKN 652 (1067)
Q Consensus 623 ---~d~~~la~aL~~ll~d~-~~~~~~~~~~~~~ 652 (1067)
-+.++++++|.++++++ +..+++++++++.
T Consensus 383 ~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~ 416 (442)
T PLN02208 383 TGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKL 416 (442)
T ss_pred CCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 26789999999999875 4556666666544
|
|
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.002 Score=75.84 Aligned_cols=94 Identities=16% Similarity=0.182 Sum_probs=71.4
Q ss_pred CCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC----chhhhccCCceEEeC
Q 001492 546 DLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRALNNGLLVD 621 (1067)
Q Consensus 546 ~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg----~~eiv~~~~~Gllv~ 621 (1067)
++..++....++|+. +++..| |++|.. |--.+..||+.+|+|+|+-..+. ..+-++....|..+.
T Consensus 281 ~~p~n~~v~~~~p~~---~~l~~a----d~vI~h----GG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~ 349 (406)
T COG1819 281 NVPDNVIVADYVPQL---ELLPRA----DAVIHH----GGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALP 349 (406)
T ss_pred cCCCceEEecCCCHH---HHhhhc----CEEEec----CCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecC
Confidence 456688888887654 588999 999976 33458899999999999977653 234566667888776
Q ss_pred --CCCHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 001492 622 --PHDQQAIADALLKLVSEKNLWVECRKNGW 650 (1067)
Q Consensus 622 --p~d~~~la~aL~~ll~d~~~~~~~~~~~~ 650 (1067)
+.+.+.++++|.++|+++..++...+...
T Consensus 350 ~~~l~~~~l~~av~~vL~~~~~~~~~~~~~~ 380 (406)
T COG1819 350 FEELTEERLRAAVNEVLADDSYRRAAERLAE 380 (406)
T ss_pred cccCCHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 68999999999999999886655444433
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.0063 Score=71.60 Aligned_cols=179 Identities=15% Similarity=0.128 Sum_probs=126.9
Q ss_pred ccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCC-CcEE
Q 001492 475 LTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLY-GQVA 552 (1067)
Q Consensus 475 ~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~-~~V~ 552 (1067)
+.+++..+++++++ +.|-.+.+++-+-++ ++..|+-+| +.|++++ +++...++.++.+.|+. .+..
T Consensus 425 glp~~avVf~c~~n--~~K~~pev~~~wmqI--L~~vP~Svl~L~~~~~~--------~~~~~~l~~la~~~Gv~~eRL~ 492 (620)
T COG3914 425 GLPEDAVVFCCFNN--YFKITPEVFALWMQI--LSAVPNSVLLLKAGGDD--------AEINARLRDLAEREGVDSERLR 492 (620)
T ss_pred CCCCCeEEEEecCC--cccCCHHHHHHHHHH--HHhCCCcEEEEecCCCc--------HHHHHHHHHHHHHcCCChhhee
Confidence 44555544444444 567677777777666 466677554 6666653 56788999999999874 6899
Q ss_pred eCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEc-------CCCCchhhhcc-CCceEEeCCCC
Q 001492 553 YPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVAT-------KNGGPVDIHRA-LNNGLLVDPHD 624 (1067)
Q Consensus 553 ~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat-------~~Gg~~eiv~~-~~~Gllv~p~d 624 (1067)
|.+..+.++-.+.|..| |+|+=+--+ +-..|.+||+-+|+|||+- .+|+. ++.. |..-++. .+
T Consensus 493 f~p~~~~~~h~a~~~iA----DlvLDTyPY-~g~TTa~daLwm~vPVlT~~G~~FasR~~~s--i~~~agi~e~vA--~s 563 (620)
T COG3914 493 FLPPAPNEDHRARYGIA----DLVLDTYPY-GGHTTASDALWMGVPVLTRVGEQFASRNGAS--IATNAGIPELVA--DS 563 (620)
T ss_pred ecCCCCCHHHHHhhchh----heeeecccC-CCccchHHHHHhcCceeeeccHHHHHhhhHH--HHHhcCCchhhc--CC
Confidence 99999999999999999 999966433 2357999999999999973 23432 3322 2233344 35
Q ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHH-H--cCCHHHHHHHHHHHHHHhHh
Q 001492 625 QQAIADALLKLVSEKNLWVECRKNGWKNI-H--LFSWPEHCRTYLTRVAACRM 674 (1067)
Q Consensus 625 ~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~--~fsw~~~a~~~l~~~~~~~~ 674 (1067)
.++..+.=..+-.|..++++.+..-.+.. . .|+....++++..+|..+-.
T Consensus 564 ~~dYV~~av~~g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~~ 616 (620)
T COG3914 564 RADYVEKAVAFGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMWS 616 (620)
T ss_pred HHHHHHHHHHhcccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHHH
Confidence 66666655566678888888777666655 2 79999999999999987654
|
|
| >PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5 | Back alignment and domain information |
|---|
Probab=97.66 E-value=9.5e-05 Score=77.47 Aligned_cols=186 Identities=16% Similarity=0.160 Sum_probs=95.0
Q ss_pred HHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCC-CCCCEEEEcCCceEEecCCCcccCCcCCCChhhhhccc
Q 001492 800 YDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEA-NEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHID 878 (1067)
Q Consensus 800 ~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~-~~~d~~I~~nGa~I~~~~~~~~~~~~~~~d~~~~~~i~ 878 (1067)
+++|.+|++. + .|.|+||-.+.-+.+.+. +-.. ..||++-+.||...|..+ .......+..++
T Consensus 2 ~~~L~~L~~~-----~-~vgvVgGsd~~k~~eQl~--~~~~~~~fdy~f~enG~~~y~~~-------~~~~~~~~~~~l- 65 (220)
T PF03332_consen 2 AELLQKLRKK-----V-PVGVVGGSDLPKIQEQLG--GDDVLDNFDYVFPENGLVAYKNG-------ELIWSQSIAEFL- 65 (220)
T ss_dssp HHHHHHHHTT-----S-EEEEEESS-HHHHHHHHS--TTTHHHH-SEEEEGGGTEEEETT-------EEEEE--HHHHH-
T ss_pred HHHHHHHHhc-----C-eEEEEcchhHHHHHHHHc--ccchHhhCCeeecCCCCeEEECC-------CchhhHhHHHHc-
Confidence 4778888876 7 899999999988877764 1111 358999999999877653 111112222222
Q ss_pred cccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEe--cCCCchHH------------HHHHHHHHHh
Q 001492 879 YRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLI--KDPSKARR------------IDDLRQKLRM 944 (1067)
Q Consensus 879 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~--~~~~~~~~------------~~el~~~L~~ 944 (1067)
..+.+++.+.-+.....+... ......++|.-.. .+.|.. .......+ -+.+.+.|+.
T Consensus 66 ---gee~~~~~in~~l~~~~~l~l-p~krGtfIE~R~g----mIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~ 137 (220)
T PF03332_consen 66 ---GEEKLQKLINFCLRYISDLDL-PVKRGTFIEFRGG----MINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKK 137 (220)
T ss_dssp ---HHHHHHHHHHHHHHHHHT----S---S-SEEEESS----EEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHHHHhCCC-CccCCCceeecCC----cEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHH
Confidence 223333322221111111100 0001122222111 222211 11111111 1234444544
Q ss_pred cCCcEEEE-EeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecC----CCCCChhhhhcCC-ceEEEeCCC
Q 001492 945 RGLRCHPM-YCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGE----SGDTDYEELISGA-HKTLIMKGV 1015 (1067)
Q Consensus 945 ~~~~~~v~-~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGD----s~N~D~~eML~~a-g~gVaMgNA 1015 (1067)
....+.+. ...+.+.+||.|+|.+|..+|++|.+.. .+ .|.|||| ++| | .+.+... -+|+.+.|=
T Consensus 138 ~f~d~~L~~siGGqiSiDvfp~GwDKty~Lr~l~~~~---~~-~I~FfGDkt~pGGN-D-yei~~~~rt~g~~V~~p 208 (220)
T PF03332_consen 138 EFPDFGLTFSIGGQISIDVFPKGWDKTYCLRHLEDEG---FD-EIHFFGDKTFPGGN-D-YEIFEDPRTIGHTVTSP 208 (220)
T ss_dssp HTCCCSEEEEEETTTEEEEEETT-SGGGGGGGTTTTT----S-EEEEEESS-STTST-T-HHHHHSTTSEEEE-SSH
T ss_pred HCCCCceEEecCCceEEccccCCccHHHHHHHHHhcc---cc-eEEEEehhccCCCC-C-ceeeecCCccEEEeCCH
Confidence 44443333 3344568999999999999999997743 34 4555999 689 9 7887654 457777653
|
4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00017 Score=79.65 Aligned_cols=66 Identities=15% Similarity=0.117 Sum_probs=51.0
Q ss_pred EEEEeCCCCCCCCch---hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHH---HHHHHHHhcCCCCCCCCEEEEcC
Q 001492 779 VIALDCYDSKGAPDK---KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVS---ETIEFLNSMKIEANEFDALICSS 850 (1067)
Q Consensus 779 lia~DiDGTLl~~~~---~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~---~~~~~l~~l~i~~~~~d~~I~~n 850 (1067)
+|++|+||||.+.+. .+.+.+.++|++|+++| + .|+++|||+.. .+...+..+|++. .++-++++.
T Consensus 3 ~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~G----~-~~~~~Tn~~~~~~~~~~~~l~~~g~~~-~~~~i~ts~ 74 (257)
T TIGR01458 3 GVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGAS----V-KVRFVTNTTKESKQDLLERLQRLGFDI-SEDEVFTPA 74 (257)
T ss_pred EEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHCC----C-eEEEEECCCCCCHHHHHHHHHHcCCCC-CHHHeEcHH
Confidence 344599999877654 27789999999999997 7 89999997655 4777888888874 456667654
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00014 Score=79.83 Aligned_cols=70 Identities=20% Similarity=0.286 Sum_probs=56.0
Q ss_pred EEEEeCCCCCCCCchhh---HHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEE
Q 001492 779 VIALDCYDSKGAPDKKM---IQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMY 855 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i---~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~ 855 (1067)
+|++|+||||.++++++ ++.+.++|++|+++| + .++|+|+.+...+...++.+++. ..||.+|| +|....
T Consensus 130 ~i~~D~D~TL~~~~~~v~irdp~V~EtL~eLkekG----i-kLaIvTNg~Re~v~~~Le~lgL~-~yFDvII~-~g~i~~ 202 (303)
T PHA03398 130 VIVFDLDSTLITDEEPVRIRDPFVYDSLDELKERG----C-VLVLWSYGNREHVVHSLKETKLE-GYFDIIIC-GGRKAG 202 (303)
T ss_pred EEEEecCCCccCCCCccccCChhHHHHHHHHHHCC----C-EEEEEcCCChHHHHHHHHHcCCC-ccccEEEE-CCCccc
Confidence 44559999999987777 799999999999997 7 79999988888889999999986 34565555 555443
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00044 Score=77.40 Aligned_cols=65 Identities=9% Similarity=0.028 Sum_probs=46.7
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCC---HHHHHHHHHhcCCCCCCCCEEEEcC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMP---VSETIEFLNSMKIEANEFDALICSS 850 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~---~~~~~~~l~~l~i~~~~~d~~I~~n 850 (1067)
+|++|+||||.+.+..+ +.+.++|++|+++| + .|+++|+|+ ...+...++.+|++. .++-++++.
T Consensus 4 ~~~~D~DGtl~~~~~~~-~ga~e~l~~L~~~g----~-~~~~~Tnns~~~~~~~~~~l~~~G~~~-~~~~i~ts~ 71 (279)
T TIGR01452 4 GFIFDCDGVLWLGERVV-PGAPELLDRLARAG----K-AALFVTNNSTKSRAEYALKFARLGFNG-LAEQLFSSA 71 (279)
T ss_pred EEEEeCCCceEcCCeeC-cCHHHHHHHHHHCC----C-eEEEEeCCCCCCHHHHHHHHHHcCCCC-ChhhEecHH
Confidence 34449999988765444 45999999999987 7 899999976 445556677888763 344455543
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.31 Score=59.01 Aligned_cols=140 Identities=15% Similarity=0.174 Sum_probs=75.9
Q ss_pred CCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCC
Q 001492 479 HKPMILALSRPDP--KKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKH 556 (1067)
Q Consensus 479 ~~~~Il~vgRld~--~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 556 (1067)
+..+++++|.... .+.+..++++++.+. ..+..+++......+.... +-..+.... . ..++...++
T Consensus 285 ~svvyvsfGS~~~~~~~~~~~~~~~l~~~~-----~~flw~~~~~~~~~~~~~~---lp~~~~~r~---~-~~g~~v~~w 352 (482)
T PLN03007 285 DSVIYLSFGSVASFKNEQLFEIAAGLEGSG-----QNFIWVVRKNENQGEKEEW---LPEGFEERT---K-GKGLIIRGW 352 (482)
T ss_pred CceEEEeecCCcCCCHHHHHHHHHHHHHCC-----CCEEEEEecCCcccchhhc---CCHHHHHHh---c-cCCEEEecC
Confidence 4567788887643 345666666666552 2454566642110000000 001111111 1 246788899
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCch----hhh-ccCCceEEe--------C--
Q 001492 557 HKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPV----DIH-RALNNGLLV--------D-- 621 (1067)
Q Consensus 557 ~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~----eiv-~~~~~Gllv--------~-- 621 (1067)
.|+. +++..++ .+.||.= -| -.+++||+++|+|+|+-...+=+ ..+ +...-|+-+ +
T Consensus 353 ~PQ~---~iL~h~~--v~~fvtH---~G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~ 423 (482)
T PLN03007 353 APQV---LILDHQA--TGGFVTH---CG-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGD 423 (482)
T ss_pred CCHH---HHhccCc--cceeeec---Cc-chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccC
Confidence 8875 5666661 1235532 23 35889999999999997653321 111 111223332 1
Q ss_pred CCCHHHHHHHHHHhhcCH
Q 001492 622 PHDQQAIADALLKLVSEK 639 (1067)
Q Consensus 622 p~d~~~la~aL~~ll~d~ 639 (1067)
.-+.+++++++.+++.++
T Consensus 424 ~~~~~~l~~av~~~m~~~ 441 (482)
T PLN03007 424 FISREKVEKAVREVIVGE 441 (482)
T ss_pred cccHHHHHHHHHHHhcCc
Confidence 137789999999999875
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.11 Score=62.21 Aligned_cols=139 Identities=12% Similarity=0.117 Sum_probs=81.3
Q ss_pred CCcEEEEEeCCC---CCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCC
Q 001492 479 HKPMILALSRPD---PKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPK 555 (1067)
Q Consensus 479 ~~~~Il~vgRld---~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g 555 (1067)
+..++++.|... +.+-+..++.+++.+. . .+..++..+.. +.+. . ...++ ..+++.+.+
T Consensus 273 ~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g----~-~fiW~~~~~~~-~~l~-------~---~~~~~--~~~~~~v~~ 334 (448)
T PLN02562 273 NSVIYISFGSWVSPIGESNVRTLALALEASG----R-PFIWVLNPVWR-EGLP-------P---GYVER--VSKQGKVVS 334 (448)
T ss_pred CceEEEEecccccCCCHHHHHHHHHHHHHCC----C-CEEEEEcCCch-hhCC-------H---HHHHH--hccCEEEEe
Confidence 345778888853 4456777777777762 1 23334432110 0111 0 11111 124677778
Q ss_pred CCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc----hhhhcc-CCceEEeCCCCHHHHHH
Q 001492 556 HHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----VDIHRA-LNNGLLVDPHDQQAIAD 630 (1067)
Q Consensus 556 ~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~----~eiv~~-~~~Gllv~p~d~~~la~ 630 (1067)
+.|+.+ ++...+ .++||.= +--.+.+||+.+|+|+|+-...+= ...+.+ ...|+-+..-+.+++++
T Consensus 335 w~PQ~~---iL~h~~--v~~fvtH----~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~l~~ 405 (448)
T PLN02562 335 WAPQLE---VLKHQA--VGCYLTH----CGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQKEVEE 405 (448)
T ss_pred cCCHHH---HhCCCc--cceEEec----CcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCCHHHHHH
Confidence 887765 454440 0345522 234689999999999999765432 223322 34577665568899999
Q ss_pred HHHHhhcCHHHHHH
Q 001492 631 ALLKLVSEKNLWVE 644 (1067)
Q Consensus 631 aL~~ll~d~~~~~~ 644 (1067)
+|.+++.+++.+++
T Consensus 406 ~v~~~l~~~~~r~~ 419 (448)
T PLN02562 406 GLRKVMEDSGMGER 419 (448)
T ss_pred HHHHHhCCHHHHHH
Confidence 99999988755443
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.26 Score=58.95 Aligned_cols=92 Identities=21% Similarity=0.266 Sum_probs=58.1
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc----hhhhccC-CceEEe-CC
Q 001492 549 GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----VDIHRAL-NNGLLV-DP 622 (1067)
Q Consensus 549 ~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~----~eiv~~~-~~Gllv-~p 622 (1067)
++....++.|+.+ ++... ..+.||.- -|+ .+++||+++|+|+|+-...+= ...+.+. ..|+-+ ..
T Consensus 324 ~~g~v~~w~PQ~~---iL~h~--~v~~fvtH---~G~-nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~ 394 (451)
T PLN02410 324 GRGYIVKWAPQKE---VLSHP--AVGGFWSH---CGW-NSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGD 394 (451)
T ss_pred CCeEEEccCCHHH---HhCCC--ccCeeeec---Cch-hHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCc
Confidence 4556668988775 45543 01456633 233 588999999999999765332 2233222 467666 33
Q ss_pred CCHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 001492 623 HDQQAIADALLKLVSEKNLWVECRKNGW 650 (1067)
Q Consensus 623 ~d~~~la~aL~~ll~d~~~~~~~~~~~~ 650 (1067)
-+.++++++|++++.+++ ..+++++++
T Consensus 395 ~~~~~v~~av~~lm~~~~-~~~~r~~a~ 421 (451)
T PLN02410 395 LDRGAVERAVKRLMVEEE-GEEMRKRAI 421 (451)
T ss_pred ccHHHHHHHHHHHHcCCc-HHHHHHHHH
Confidence 477899999999998764 334444443
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.23 Score=59.63 Aligned_cols=112 Identities=11% Similarity=0.021 Sum_probs=70.6
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC----chhhhccCCceEEeCC----
Q 001492 551 VAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRALNNGLLVDP---- 622 (1067)
Q Consensus 551 V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg----~~eiv~~~~~Gllv~p---- 622 (1067)
+.+.++.|+.+ ++...+ .+.||.= +--.+++||+++|+|+|+-...+ ....+.....|+.++.
T Consensus 341 ~vv~~W~PQ~~---IL~H~~--v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~ 411 (472)
T PLN02670 341 MIHVGWVPQVK---ILSHES--VGGFLTH----CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERD 411 (472)
T ss_pred eEEeCcCCHHH---HhcCcc--cceeeec----CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccC
Confidence 56678888765 454441 1346532 23468999999999999976533 2233444567887753
Q ss_pred --CCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHh
Q 001492 623 --HDQQAIADALLKLVSEKNLWVECRKNGWKNIH----LFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 623 --~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~----~fsw~~~a~~~l~~~~~~ 672 (1067)
-+.++++++|.+++.+++ -.++++++++..+ .=.-.+.++.+.+.+.+.
T Consensus 412 ~~~~~e~i~~av~~vm~~~~-g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 412 GSFTSDSVAESVRLAMVDDA-GEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLREN 466 (472)
T ss_pred CcCcHHHHHHHHHHHhcCcc-hHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHh
Confidence 358899999999998752 2345555554443 344556666666665544
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.33 Score=58.44 Aligned_cols=81 Identities=20% Similarity=0.183 Sum_probs=54.5
Q ss_pred cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc----hhhh-ccCCceEEeCC--
Q 001492 550 QVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----VDIH-RALNNGLLVDP-- 622 (1067)
Q Consensus 550 ~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~----~eiv-~~~~~Gllv~p-- 622 (1067)
.+.+.++.|+.+ ++...+ .+.||.- +--.+++||+.+|+|+|+-...+= ...+ .....|+.++.
T Consensus 339 g~vv~~W~PQ~~---iL~h~~--vg~FitH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~ 409 (481)
T PLN02992 339 GFVVPSWAPQAE---ILAHQA--VGGFLTH----CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPK 409 (481)
T ss_pred CEEEeecCCHHH---HhCCcc--cCeeEec----CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCC
Confidence 477788988765 455541 1335532 334689999999999999875442 2233 34456777743
Q ss_pred --CCHHHHHHHHHHhhcCH
Q 001492 623 --HDQQAIADALLKLVSEK 639 (1067)
Q Consensus 623 --~d~~~la~aL~~ll~d~ 639 (1067)
-+.++++++|.+++.++
T Consensus 410 ~~~~~~~l~~av~~vm~~~ 428 (481)
T PLN02992 410 EVISRSKIEALVRKVMVEE 428 (481)
T ss_pred CcccHHHHHHHHHHHhcCC
Confidence 37789999999999764
|
|
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.055 Score=60.44 Aligned_cols=339 Identities=17% Similarity=0.146 Sum_probs=169.7
Q ss_pred CceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcC--CCeeEEEEEecCCCCCCCCCcCCCcccccCCCCC
Q 001492 164 KKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARM--PGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPE 241 (1067)
Q Consensus 164 ~~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~--G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~ 241 (1067)
+.+||+|.|.|-+ |- |.-+....+|++|.+. | .+|.++|....-+..+
T Consensus 8 ~~~Ri~~Yshd~~--------Gl-----GHlrR~~~Ia~aLv~d~~~--~~Il~IsG~~~~~~F~--------------- 57 (400)
T COG4671 8 KRPRILFYSHDLL--------GL-----GHLRRALRIAHALVEDYLG--FDILIISGGPPAGGFP--------------- 57 (400)
T ss_pred ccceEEEEehhhc--------cc-----hHHHHHHHHHHHHhhcccC--ceEEEEeCCCccCCCC---------------
Confidence 4569999996553 32 8889999999999998 8 9999999854322221
Q ss_pred CCCccccccCCeEEEeccCCCCc--cCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchh--
Q 001492 242 DDGIEVGESSGAYIIRIPFGPRD--KYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAG-- 317 (1067)
Q Consensus 242 ~~~~~~~~~~gv~i~ri~~~~~~--~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~-- 317 (1067)
...|+..+.+|+-... .......+-..+.++.. +-.++... .+ +.++|||+.......|
T Consensus 58 -------~~~gVd~V~LPsl~k~~~G~~~~~d~~~~l~e~~~----~Rs~lil~---t~---~~fkPDi~IVd~~P~Glr 120 (400)
T COG4671 58 -------GPAGVDFVKLPSLIKGDNGEYGLVDLDGDLEETKK----LRSQLILS---TA---ETFKPDIFIVDKFPFGLR 120 (400)
T ss_pred -------CcccCceEecCceEecCCCceeeeecCCCHHHHHH----HHHHHHHH---HH---HhcCCCEEEEeccccchh
Confidence 1248899999873220 11111111112333322 11121111 11 1378999998765332
Q ss_pred -HHHHHHH--hcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhh
Q 001492 318 -DSAALLS--GALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGL 394 (1067)
Q Consensus 318 -~~a~~l~--~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~ 394 (1067)
.+...+. +..+.+.|.-..++-.. .+.... -.++-+.++.+-+..|.|.+...-........
T Consensus 121 ~EL~ptL~yl~~~~t~~vL~lr~i~D~--p~~~~~-------------~w~~~~~~~~I~r~yD~V~v~GdP~f~d~~~~ 185 (400)
T COG4671 121 FELLPTLEYLKTTGTRLVLGLRSIRDI--PQELEA-------------DWRRAETVRLINRFYDLVLVYGDPDFYDPLTE 185 (400)
T ss_pred hhhhHHHHHHhhcCCcceeehHhhhhc--hhhhcc-------------chhhhHHHHHHHHhheEEEEecCccccChhhc
Confidence 1112221 12244555655554111 011000 01111223334566788888765444443333
Q ss_pred cCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhh
Q 001492 395 YDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRF 474 (1067)
Q Consensus 395 y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (1067)
|+- .+.+ +-.+.+-|.= +.-.+.. +.|+-+
T Consensus 186 ~~~-~~~i--------------------~~k~~ytG~v-q~~~~~~----------------------~~p~~~------ 215 (400)
T COG4671 186 FPF-APAI--------------------RAKMRYTGFV-QRSLPHL----------------------PLPPHE------ 215 (400)
T ss_pred CCc-cHhh--------------------hhheeEeEEe-eccCcCC----------------------CCCCcC------
Confidence 332 1221 1223333321 1101111 001000
Q ss_pred ccCCCCcEEEEEeCC-CCCCCHHHHHHHHHhcccccCCC-cEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEE
Q 001492 475 LTNPHKPMILALSRP-DPKKNITTLLKAFGECRPLRELA-NLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVA 552 (1067)
Q Consensus 475 ~~~~~~~~Il~vgRl-d~~Kgi~~ll~A~~~l~~l~~~~-~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~ 552 (1067)
.+....+++++|.= +...=+...+.|...+. +.. ..++|.|.-- . . ...+++.....-.++|.
T Consensus 216 -~pE~~~Ilvs~GGG~dG~eLi~~~l~A~~~l~---~l~~~~~ivtGP~M-----P---~---~~r~~l~~~A~~~p~i~ 280 (400)
T COG4671 216 -APEGFDILVSVGGGADGAELIETALAAAQLLA---GLNHKWLIVTGPFM-----P---E---AQRQKLLASAPKRPHIS 280 (400)
T ss_pred -CCccceEEEecCCChhhHHHHHHHHHHhhhCC---CCCcceEEEeCCCC-----C---H---HHHHHHHHhcccCCCeE
Confidence 02345567777752 22223334444444433 222 2555655431 1 1 22334444444446777
Q ss_pred eCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchh--hhccC---CceE--EeCCC--
Q 001492 553 YPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVD--IHRAL---NNGL--LVDPH-- 623 (1067)
Q Consensus 553 ~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~e--iv~~~---~~Gl--lv~p~-- 623 (1067)
...+ ..++..|+..| +..|.= -|+ .|..|-+.+|+|-+.-..+.+.+ +++.. .-|+ +..|.
T Consensus 281 I~~f--~~~~~~ll~gA----~~vVSm---~GY-NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~l 350 (400)
T COG4671 281 IFEF--RNDFESLLAGA----RLVVSM---GGY-NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENL 350 (400)
T ss_pred EEEh--hhhHHHHHHhh----heeeec---ccc-hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccC
Confidence 7777 78999999999 777732 233 47789999999988876554433 22210 1122 12232
Q ss_pred CHHHHHHHHHHhhcCH
Q 001492 624 DQQAIADALLKLVSEK 639 (1067)
Q Consensus 624 d~~~la~aL~~ll~d~ 639 (1067)
.++.+|++|..+++-|
T Consensus 351 t~~~La~al~~~l~~P 366 (400)
T COG4671 351 TPQNLADALKAALARP 366 (400)
T ss_pred ChHHHHHHHHhcccCC
Confidence 4677888888888743
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.49 Score=56.61 Aligned_cols=94 Identities=13% Similarity=0.094 Sum_probs=61.3
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC----chhhh-ccCCceEEeCC---
Q 001492 551 VAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG----PVDIH-RALNNGLLVDP--- 622 (1067)
Q Consensus 551 V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg----~~eiv-~~~~~Gllv~p--- 622 (1067)
..+.++.|+.+ ++..+ ..+.||.- +--.+++||+++|+|+|+-...+ ....+ +....|+.+..
T Consensus 314 ~vv~~w~PQ~~---vL~h~--~v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~ 384 (446)
T PLN00414 314 IVWEGWVEQPL---ILSHP--SVGCFVNH----CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDS 384 (446)
T ss_pred eEEeccCCHHH---HhcCC--ccceEEec----CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccC
Confidence 44567887765 44444 11456632 33468999999999999976533 22233 34566777742
Q ss_pred --CCHHHHHHHHHHhhcCH-HHHHHHHHHHHHHH
Q 001492 623 --HDQQAIADALLKLVSEK-NLWVECRKNGWKNI 653 (1067)
Q Consensus 623 --~d~~~la~aL~~ll~d~-~~~~~~~~~~~~~~ 653 (1067)
-+.+++++++.+++.++ +..+++++++++..
T Consensus 385 ~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~ 418 (446)
T PLN00414 385 GWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLK 418 (446)
T ss_pred CccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHH
Confidence 37889999999999864 45566666666543
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.67 Score=55.37 Aligned_cols=93 Identities=17% Similarity=0.169 Sum_probs=59.2
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc----hhhhcc-CCceEEeCC-
Q 001492 549 GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----VDIHRA-LNNGLLVDP- 622 (1067)
Q Consensus 549 ~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~----~eiv~~-~~~Gllv~p- 622 (1067)
+++.+.++.|+.+ ++... ..+.||.- +-.++++||+++|+|+|+-..-+= ...+.+ -..|+-+..
T Consensus 317 ~~~~i~~W~PQ~~---iL~H~--~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~ 387 (449)
T PLN02173 317 DKSLVLKWSPQLQ---VLSNK--AIGCFMTH----CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAE 387 (449)
T ss_pred CceEEeCCCCHHH---HhCCC--ccceEEec----CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeec
Confidence 4577779988654 55554 11355532 334799999999999999765332 223332 245666532
Q ss_pred -----CCHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q 001492 623 -----HDQQAIADALLKLVSEKNLWVECRKNGWK 651 (1067)
Q Consensus 623 -----~d~~~la~aL~~ll~d~~~~~~~~~~~~~ 651 (1067)
-+.+++++++.+++.+++ .+++++++++
T Consensus 388 ~~~~~~~~e~v~~av~~vm~~~~-~~~~r~~a~~ 420 (449)
T PLN02173 388 KESGIAKREEIEFSIKEVMEGEK-SKEMKENAGK 420 (449)
T ss_pred ccCCcccHHHHHHHHHHHhcCCh-HHHHHHHHHH
Confidence 167999999999998743 3455555443
|
|
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.54 Score=55.77 Aligned_cols=90 Identities=10% Similarity=0.093 Sum_probs=56.8
Q ss_pred CCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCC-CchhhhccC-CceEEeC--CCCHHHHH
Q 001492 554 PKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNG-GPVDIHRAL-NNGLLVD--PHDQQAIA 629 (1067)
Q Consensus 554 ~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~G-g~~eiv~~~-~~Gllv~--p~d~~~la 629 (1067)
....+..++..+++.| |++|-.-+ -.++=|+++|+|+|+-... =...+++.. ...++++ .-+.+++.
T Consensus 313 ~~~~~~~e~~~iIs~~----dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~~~~~~~~~l~~~~Li 383 (426)
T PRK10017 313 MDELNDLEMGKILGAC----ELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQ 383 (426)
T ss_pred cCCCChHHHHHHHhhC----CEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHcCCccEEechhhCCHHHHH
Confidence 3334456788999999 99884322 2678899999999996531 122222221 2234444 34567899
Q ss_pred HHHHHhhcCHHHHHHHHHHHHHH
Q 001492 630 DALLKLVSEKNLWVECRKNGWKN 652 (1067)
Q Consensus 630 ~aL~~ll~d~~~~~~~~~~~~~~ 652 (1067)
+.+.+++++.+..++.-+.....
T Consensus 384 ~~v~~~~~~r~~~~~~l~~~v~~ 406 (426)
T PRK10017 384 AMVADTLGQLPALNARLAEAVSR 406 (426)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHH
Confidence 99999999877655544333333
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.85 Score=55.06 Aligned_cols=137 Identities=15% Similarity=0.171 Sum_probs=75.2
Q ss_pred CCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCChh-hhhccchHHHHHHHHHHHhcCCCCcEEeCC
Q 001492 479 HKPMILALSRPDP--KKNITTLLKAFGECRPLRELANLTLIMGNRDDIE-EMSSGNASVLITVLKLIDKYDLYGQVAYPK 555 (1067)
Q Consensus 479 ~~~~Il~vgRld~--~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~-~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g 555 (1067)
+..+.++.|.+.. .+-+..++.+++.+. ..+.++++...+.. ... .....+.+... ...+...+
T Consensus 283 ~svVyvsfGS~~~~~~~~~~ela~gL~~~~-----~~flw~~~~~~~~~~~~~----~lp~~~~~r~~----~~g~~v~~ 349 (477)
T PLN02863 283 HKVVYVCFGSQVVLTKEQMEALASGLEKSG-----VHFIWCVKEPVNEESDYS----NIPSGFEDRVA----GRGLVIRG 349 (477)
T ss_pred CceEEEEeeceecCCHHHHHHHHHHHHhCC-----CcEEEEECCCcccccchh----hCCHHHHHHhc----cCCEEecC
Confidence 3456677887642 234666666666552 23444665322110 000 00111111111 23577778
Q ss_pred CCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC----chhh-hccCCceEEeC-----CCCH
Q 001492 556 HHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG----PVDI-HRALNNGLLVD-----PHDQ 625 (1067)
Q Consensus 556 ~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg----~~ei-v~~~~~Gllv~-----p~d~ 625 (1067)
+.|+. +++... +.++||.- -| -.+++||+++|+|+|+-...+ .... ++.-..|+.+. .-+.
T Consensus 350 w~PQ~---~vL~h~--~v~~fvtH---~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~ 420 (477)
T PLN02863 350 WAPQV---AILSHR--AVGAFLTH---CG-WNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVPDS 420 (477)
T ss_pred CCCHH---HHhcCC--CcCeEEec---CC-chHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCcCH
Confidence 98864 455552 12677743 23 358899999999999976433 2222 33335676662 1267
Q ss_pred HHHHHHHHHhhc
Q 001492 626 QAIADALLKLVS 637 (1067)
Q Consensus 626 ~~la~aL~~ll~ 637 (1067)
+++++++.+++.
T Consensus 421 ~~v~~~v~~~m~ 432 (477)
T PLN02863 421 DELARVFMESVS 432 (477)
T ss_pred HHHHHHHHHHhh
Confidence 899999999883
|
|
| >PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.011 Score=65.42 Aligned_cols=85 Identities=19% Similarity=0.127 Sum_probs=57.3
Q ss_pred CceEEEEcCC-chhHHHHHHHhcCCCcEEEEeCCCch-hhHHHHHhhCCC--ChhhhhhHhHHHHhHHHhhcccccCCEE
Q 001492 305 WPYVIHGHYA-DAGDSAALLSGALNVPMVLTGHSLGR-NKLEQLLKQGRQ--SKEDINSTYKIMRRIEGEELSLDAAELV 380 (1067)
Q Consensus 305 ~pDvIh~h~~-~a~~~a~~l~~~~giP~V~t~H~l~~-~~~~~l~~~g~~--~~~~i~~~y~~~~ri~~E~~~l~~Ad~V 380 (1067)
+.||+|+... .++.+++.++...|+|+++|-|+.+. +....++...++ ...-.....+++..+ -+.+++.||.|
T Consensus 172 ~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l--~~~~Y~~Ad~I 249 (268)
T PF11997_consen 172 KADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESL--SRLAYRAADRI 249 (268)
T ss_pred CCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHH--HHHHHHhhCee
Confidence 4699999876 78999999999999999999999854 333444444443 111111122223322 46689999999
Q ss_pred EeCCHHHHHHH
Q 001492 381 ITSTKQEIDEQ 391 (1067)
Q Consensus 381 i~~S~~~~~~~ 391 (1067)
++..+.-.+.|
T Consensus 250 ~~l~~~n~~~q 260 (268)
T PF11997_consen 250 TPLYEYNREWQ 260 (268)
T ss_pred cccchhhHHHH
Confidence 99998654444
|
It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY. |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.042 Score=63.69 Aligned_cols=145 Identities=19% Similarity=0.279 Sum_probs=90.4
Q ss_pred cCCCCcEEEEE-e-CCCC-CCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEE
Q 001492 476 TNPHKPMILAL-S-RPDP-KKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVA 552 (1067)
Q Consensus 476 ~~~~~~~Il~v-g-Rld~-~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~ 552 (1067)
.++++++|..+ | |-.. ++.++.+++++..+. ...|++.+++..-+.. ....+.......+..-.+.
T Consensus 180 l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~--~~~p~l~fvvp~a~~~---------~~~~i~~~~~~~~~~~~~~ 248 (373)
T PF02684_consen 180 LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLK--KQRPDLQFVVPVAPEV---------HEELIEEILAEYPPDVSIV 248 (373)
T ss_pred CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHH--HhCCCeEEEEecCCHH---------HHHHHHHHHHhhCCCCeEE
Confidence 45667765443 3 4433 467799999999995 5678888877765421 1122333444433322232
Q ss_pred eCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCch-h-----hhccCC-----------
Q 001492 553 YPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPV-D-----IHRALN----------- 615 (1067)
Q Consensus 553 ~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~-e-----iv~~~~----------- 615 (1067)
.. ..+-.+.++.| |+.+..| |.+.+|++.+|+|+|..--..+- - +++-..
T Consensus 249 ~~----~~~~~~~m~~a----d~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~ 315 (373)
T PF02684_consen 249 II----EGESYDAMAAA----DAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGRE 315 (373)
T ss_pred Ec----CCchHHHHHhC----cchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCC
Confidence 22 34677899999 9988774 99999999999999875432221 1 111000
Q ss_pred --ceEEeCCCCHHHHHHHHHHhhcCHHHHHH
Q 001492 616 --NGLLVDPHDQQAIADALLKLVSEKNLWVE 644 (1067)
Q Consensus 616 --~Gllv~p~d~~~la~aL~~ll~d~~~~~~ 644 (1067)
.-++-+.-+++.++.++..+++|++.++.
T Consensus 316 v~PEliQ~~~~~~~i~~~~~~ll~~~~~~~~ 346 (373)
T PF02684_consen 316 VVPELIQEDATPENIAAELLELLENPEKRKK 346 (373)
T ss_pred cchhhhcccCCHHHHHHHHHHHhcCHHHHHH
Confidence 01222345889999999999999876443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.79 Score=55.41 Aligned_cols=93 Identities=16% Similarity=0.191 Sum_probs=57.6
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC----chh-hhccCCceEEeCC---
Q 001492 551 VAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG----PVD-IHRALNNGLLVDP--- 622 (1067)
Q Consensus 551 V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg----~~e-iv~~~~~Gllv~p--- 622 (1067)
+.+.++.|+.+ ++...+ .+.||.= -|+ .+++||+++|+|+|+-..-+ ... +++....|+.++.
T Consensus 341 ~~v~~w~PQ~~---iL~h~~--vg~fvtH---~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~ 411 (480)
T PLN00164 341 LVWPTWAPQKE---ILAHAA--VGGFVTH---CGW-NSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRK 411 (480)
T ss_pred eEEeecCCHHH---HhcCcc--cCeEEee---ccc-chHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccc
Confidence 55667877654 455541 1345532 233 48899999999999976432 222 2344466777642
Q ss_pred ----CCHHHHHHHHHHhhcCHH-HHHHHHHHHHHH
Q 001492 623 ----HDQQAIADALLKLVSEKN-LWVECRKNGWKN 652 (1067)
Q Consensus 623 ----~d~~~la~aL~~ll~d~~-~~~~~~~~~~~~ 652 (1067)
-+.++++++|.+++.+++ ..+++++++.+.
T Consensus 412 ~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~ 446 (480)
T PLN00164 412 RDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEM 446 (480)
T ss_pred cCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 257899999999998653 344555554443
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.68 Score=55.28 Aligned_cols=93 Identities=15% Similarity=0.110 Sum_probs=60.9
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc----hhhh-ccCCceEEeCC---
Q 001492 551 VAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----VDIH-RALNNGLLVDP--- 622 (1067)
Q Consensus 551 V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~----~eiv-~~~~~Gllv~p--- 622 (1067)
+...++.|+.+| ++.. ..++||.- +-..+++||+++|+|+|+-...+= ...+ +....|+-+.+
T Consensus 319 ~v~~~W~PQ~~v---L~h~--~v~~FvtH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~ 389 (453)
T PLN02764 319 VVWGGWVQQPLI---LSHP--SVGCFVSH----CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREET 389 (453)
T ss_pred cEEeCCCCHHHH---hcCc--ccCeEEec----CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccC
Confidence 566688887754 4443 11557632 334689999999999999876442 2233 33345665532
Q ss_pred --CCHHHHHHHHHHhhcCH-HHHHHHHHHHHHH
Q 001492 623 --HDQQAIADALLKLVSEK-NLWVECRKNGWKN 652 (1067)
Q Consensus 623 --~d~~~la~aL~~ll~d~-~~~~~~~~~~~~~ 652 (1067)
-+.+++.+++.++++++ +..+++++++++.
T Consensus 390 ~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~ 422 (453)
T PLN02764 390 GWFSKESLRDAINSVMKRDSEIGNLVKKNHTKW 422 (453)
T ss_pred CccCHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 27789999999999875 4556666666554
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0041 Score=63.77 Aligned_cols=149 Identities=17% Similarity=0.218 Sum_probs=77.1
Q ss_pred CCeEEEeccCCCCccCcccccccchhHHHHHHHHHH--HHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcC-
Q 001492 251 SGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAH--CLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGAL- 327 (1067)
Q Consensus 251 ~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~--~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~- 327 (1067)
+||++++....+ ......-|+...|...+++. ..+....|++ +++.||||.+|... | -+.++...+
T Consensus 19 ~GV~~~~y~~~~----~~~~~~~~~~~~~e~~~~rg~av~~a~~~L~~-----~Gf~PDvI~~H~GW-G-e~Lflkdv~P 87 (171)
T PF12000_consen 19 PGVRVVRYRPPR----GPTPGTHPYVRDFEAAVLRGQAVARAARQLRA-----QGFVPDVIIAHPGW-G-ETLFLKDVFP 87 (171)
T ss_pred CCcEEEEeCCCC----CCCCCCCcccccHHHHHHHHHHHHHHHHHHHH-----cCCCCCEEEEcCCc-c-hhhhHHHhCC
Confidence 488888775422 22344556666666555442 2223333443 24789999999742 1 123445544
Q ss_pred CCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHH
Q 001492 328 NVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLR 407 (1067)
Q Consensus 328 giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~ 407 (1067)
++|++..+--++........-....+. ......++..+-..--..+..||..+++|...... | ++.+
T Consensus 88 ~a~li~Y~E~~y~~~g~d~~FDpe~p~-~~~~~~~~r~rN~~~l~~l~~~D~~isPT~wQ~~~----f---P~~~----- 154 (171)
T PF12000_consen 88 DAPLIGYFEFYYRASGADVGFDPEFPP-SLDDRARLRMRNAHNLLALEQADAGISPTRWQRSQ----F---PAEF----- 154 (171)
T ss_pred CCcEEEEEEEEecCCCCcCCCCCCCCC-CHHHHHHHHHHhHHHHHHHHhCCcCcCCCHHHHHh----C---CHHH-----
Confidence 788875443221111000000000000 11222222212122345688999999999865443 2 3221
Q ss_pred HHHhcCcccCCCCCCCEEEeCCCCCCCCc
Q 001492 408 ARARRGVNCHGRYMPRMVVIPPGMDFSNV 436 (1067)
Q Consensus 408 ~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f 436 (1067)
.+||.||+-|||++.+
T Consensus 155 -------------r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 155 -------------RSKISVIHDGIDTDRF 170 (171)
T ss_pred -------------HcCcEEeecccchhhc
Confidence 1399999999999865
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.10 E-value=1.2 Score=54.08 Aligned_cols=86 Identities=13% Similarity=0.099 Sum_probs=54.3
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC----ch-hhhccCCceEEeCC-
Q 001492 549 GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG----PV-DIHRALNNGLLVDP- 622 (1067)
Q Consensus 549 ~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg----~~-eiv~~~~~Gllv~p- 622 (1067)
+++.+.++.|+.+ +++.. +.+.||.= -| -.+++||+.+|+|+|+-...+ .. .+++....|+.++.
T Consensus 342 ~~g~v~~W~PQ~~---iL~H~--~v~~FvtH---~G-~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~ 412 (481)
T PLN02554 342 DIGKVIGWAPQVA---VLAKP--AIGGFVTH---CG-WNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKY 412 (481)
T ss_pred cCceEEeeCCHHH---HhCCc--ccCccccc---Cc-cchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeecc
Confidence 4566668887654 44322 11556622 23 358899999999999976533 12 33444456776631
Q ss_pred ------------CCHHHHHHHHHHhhc-CHHHHH
Q 001492 623 ------------HDQQAIADALLKLVS-EKNLWV 643 (1067)
Q Consensus 623 ------------~d~~~la~aL~~ll~-d~~~~~ 643 (1067)
-+.++++++|.+++. +++.++
T Consensus 413 ~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~r~ 446 (481)
T PLN02554 413 WRGDLLAGEMETVTAEEIERGIRCLMEQDSDVRK 446 (481)
T ss_pred ccccccccccCeEcHHHHHHHHHHHhcCCHHHHH
Confidence 267899999999996 544333
|
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.21 Score=55.14 Aligned_cols=136 Identities=17% Similarity=0.229 Sum_probs=77.6
Q ss_pred hhhhhccCCCCcEEEE-E-----eCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHH
Q 001492 470 DVMRFLTNPHKPMILA-L-----SRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLID 543 (1067)
Q Consensus 470 ~~~~~~~~~~~~~Il~-v-----gRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~ 543 (1067)
.+++++...+.++|+. . .-....+++..+.+.+..+.+ .+ +|+=.++.. ..+.+.
T Consensus 172 vlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k---~g---iV~ipr~~~-------------~~eife 232 (346)
T COG1817 172 VLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKK---YG---IVLIPREKE-------------QAEIFE 232 (346)
T ss_pred HHHHcCCCCCCceEEEeeccccceeeccccchhhHHHHHHHHHh---Cc---EEEecCchh-------------HHHHHh
Confidence 3444555555555543 1 112346788788888888843 33 333344321 123333
Q ss_pred hcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCC---CchhhhccCCceEEe
Q 001492 544 KYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNG---GPVDIHRALNNGLLV 620 (1067)
Q Consensus 544 ~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~G---g~~eiv~~~~~Gllv 620 (1067)
.+. ++..+... .+.+.-+|.+. .++ .+-|.-.-||+..|+|.|++..| +..+... ..|+++
T Consensus 233 ~~~---n~i~pk~~-vD~l~Llyya~-----lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~~ 296 (346)
T COG1817 233 GYR---NIIIPKKA-VDTLSLLYYAT-----LVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLLY 296 (346)
T ss_pred hhc---cccCCccc-ccHHHHHhhhh-----eee-----cCCchHHHHHHHhCCceEEecCCccccccHHHH--hcCcee
Confidence 332 23333221 22244444443 544 24466679999999999999865 3333332 469999
Q ss_pred CCCCHHHHHHHHHHhhcCHH
Q 001492 621 DPHDQQAIADALLKLVSEKN 640 (1067)
Q Consensus 621 ~p~d~~~la~aL~~ll~d~~ 640 (1067)
+..|+.++.+...+++.++.
T Consensus 297 ~s~~~~~~~~~a~~~l~~~~ 316 (346)
T COG1817 297 HSTDEIAIVEYAVRNLKYRR 316 (346)
T ss_pred ecCCHHHHHHHHHHHhhchh
Confidence 98898887777777777664
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.00032 Score=69.01 Aligned_cols=54 Identities=11% Similarity=0.108 Sum_probs=50.7
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCcccchhhhhccc
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTT 1027 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~~~~~~~~a~ 1027 (1067)
+|-.+...|+++++++++++.. +||+.| | +++|+.+|.++|+.+|+ ++++.+++
T Consensus 83 dK~~a~~~L~~~~~l~~e~~ay-iGDD~~-D-lpvm~~vGls~a~~dAh---~~v~~~a~ 136 (170)
T COG1778 83 DKLAAFEELLKKLNLDPEEVAY-VGDDLV-D-LPVMEKVGLSVAVADAH---PLLKQRAD 136 (170)
T ss_pred hHHHHHHHHHHHhCCCHHHhhh-hcCccc-c-HHHHHHcCCcccccccC---HHHHHhhH
Confidence 6899999999999999999977 999999 9 99999999999999999 77777877
|
|
| >PF08550 DUF1752: Fungal protein of unknown function (DUF1752); InterPro: IPR013860 This entry represents fungal proteins of unknown function | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.00042 Score=48.82 Aligned_cols=24 Identities=29% Similarity=0.808 Sum_probs=18.0
Q ss_pred HHhcchhhhhhhhhhhhHHHHHhh
Q 001492 66 VATRNTRERSSRLENMCWRIWHLT 89 (1067)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~ 89 (1067)
+.++..-+=..||||++||+|+.+
T Consensus 6 ~~~k~~l~~~~RLeN~sWR~w~~~ 29 (29)
T PF08550_consen 6 TKCKDSLPNGERLENLSWRLWNKN 29 (29)
T ss_pred hhhhhhcCcchhHHHHHHHHHhcC
Confidence 344445555889999999999864
|
This short section domain is bounded by two highly conserved tryptophans. The entry contains P34072 from SWISSPROT that is thought to be a negative regulator of RAS-cAMP pathway in S. cerevisiae and the S. pombe member is a GAF1 transcription factor Q10280 from SWISSPROT that is also associated with the zinc finger family GATA PF00320 from PFAM. |
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.19 Score=53.91 Aligned_cols=200 Identities=16% Similarity=0.115 Sum_probs=112.5
Q ss_pred CCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeC
Q 001492 304 VWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITS 383 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~ 383 (1067)
.+||++++....+..++..+.+..+.+.|+-+.+. + .-.+.-|.||++
T Consensus 69 ~~Pdl~I~aGrrta~l~~~lkk~~~~~~vVqI~~P------------r--------------------lp~~~fDlvivp 116 (329)
T COG3660 69 QRPDLIITAGRRTAPLAFYLKKKFGGIKVVQIQDP------------R--------------------LPYNHFDLVIVP 116 (329)
T ss_pred CCCceEEecccchhHHHHHHHHhcCCceEEEeeCC------------C--------------------CCcccceEEecc
Confidence 57999999988788888888888877666555542 1 114557999999
Q ss_pred CHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCC
Q 001492 384 TKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKA 463 (1067)
Q Consensus 384 S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1067)
-++.++++-.. ...++|.-=.+..+.+..
T Consensus 117 ~HD~~~~~s~~----------------------------~~Nilpi~Gs~h~Vt~~~----------------------- 145 (329)
T COG3660 117 YHDWREELSDQ----------------------------GPNILPINGSPHNVTSQR----------------------- 145 (329)
T ss_pred chhhhhhhhcc----------------------------CCceeeccCCCCcccHHH-----------------------
Confidence 98877663211 123344211122222111
Q ss_pred cchhhHhhhhhccCCCCcEEEEEeCCCCCCCH-----HHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHH
Q 001492 464 IPAIWSDVMRFLTNPHKPMILALSRPDPKKNI-----TTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITV 538 (1067)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi-----~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i 538 (1067)
..+..+..++++..+...+-+.||.-.+.-.+ ..+..++-+. +.....-.++--+|-..+. +
T Consensus 146 lAa~~e~~~~~~p~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~--l~~~g~~~lisfSRRTp~~-----------~ 212 (329)
T COG3660 146 LAALREAFKHLLPLPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKI--LENQGGSFLISFSRRTPDT-----------V 212 (329)
T ss_pred hhhhHHHHHhhCCCCCceEEEEecCCCCCCccCHHHHHHHHHHHHHH--HHhCCceEEEEeecCCcHH-----------H
Confidence 01111222333345666788899987655444 2223333222 1212222345455543222 2
Q ss_pred HHHHHh-cCCCCcEEeCCCC-CCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC
Q 001492 539 LKLIDK-YDLYGQVAYPKHH-KQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG 606 (1067)
Q Consensus 539 ~~l~~~-~~l~~~V~~~g~~-~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg 606 (1067)
..++.. +.-.+.+++.+.- ...=..++++.| |.+|.+...-.| +-||++.|+||-.-...+
T Consensus 213 ~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~A----dyii~TaDSinM---~sEAasTgkPv~~~~~~~ 275 (329)
T COG3660 213 KSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAA----DYIISTADSINM---CSEAASTGKPVFILEPPN 275 (329)
T ss_pred HHHHHhccccCceeEeCCCCCCCCchHHHHhhc----ceEEEecchhhh---hHHHhccCCCeEEEecCC
Confidence 233333 4555566666541 223578899999 999988654333 679999999998765443
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.062 Score=61.20 Aligned_cols=153 Identities=13% Similarity=0.110 Sum_probs=89.4
Q ss_pred hhhccCCCCcEE-EEEe-CCC-CCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCC
Q 001492 472 MRFLTNPHKPMI-LALS-RPD-PKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLY 548 (1067)
Q Consensus 472 ~~~~~~~~~~~I-l~vg-Rld-~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~ 548 (1067)
..+..+.+++++ +..| |-. -.+..+.+++|+..+. ...|++.+++.-.... +...+....+.....
T Consensus 180 ~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~--~~~~~~~~vlp~~~~~---------~~~~~~~~~~~~~~~ 248 (381)
T COG0763 180 EKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELK--ARYPDLKFVLPLVNAK---------YRRIIEEALKWEVAG 248 (381)
T ss_pred HHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHH--hhCCCceEEEecCcHH---------HHHHHHHHhhccccC
Confidence 344455565554 4444 332 3567888899999985 4678888888765421 111122222222211
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcC-CCCchhhhcc------------CC
Q 001492 549 GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATK-NGGPVDIHRA------------LN 615 (1067)
Q Consensus 549 ~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~-~Gg~~eiv~~------------~~ 615 (1067)
..+. +...+-...+..| |+.+.. .|.+.+|++.+|+|+|.+= ...+.-.+.. --
T Consensus 249 ~~~~----~~~~~~~~a~~~a----D~al~a-----SGT~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi 315 (381)
T COG0763 249 LSLI----LIDGEKRKAFAAA----DAALAA-----SGTATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNIL 315 (381)
T ss_pred ceEE----ecCchHHHHHHHh----hHHHHh-----ccHHHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHh
Confidence 1222 2245677899999 998876 4999999999999998864 3322111100 00
Q ss_pred ce-EEe-----CCCCHHHHHHHHHHhhcCHHHHHHHHHH
Q 001492 616 NG-LLV-----DPHDQQAIADALLKLVSEKNLWVECRKN 648 (1067)
Q Consensus 616 ~G-llv-----~p~d~~~la~aL~~ll~d~~~~~~~~~~ 648 (1067)
.| .+| ..-.++.|++++..++.++..+.++.+.
T Consensus 316 ~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~ 354 (381)
T COG0763 316 AGREIVPELIQEDCTPENLARALEELLLNGDRREALKEK 354 (381)
T ss_pred cCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHH
Confidence 11 111 1135789999999999998554444443
|
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.027 Score=61.00 Aligned_cols=140 Identities=21% Similarity=0.322 Sum_probs=85.0
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCC
Q 001492 478 PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHH 557 (1067)
Q Consensus 478 ~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~ 557 (1067)
+.+.+++++|.-|+ ||+ .++.+..+. +..-++.+|+|+.... +..+.+.+ ..++++.++-.
T Consensus 157 ~~r~ilI~lGGsDp-k~l--t~kvl~~L~--~~~~nl~iV~gs~~p~----------l~~l~k~~---~~~~~i~~~~~- 217 (318)
T COG3980 157 PKRDILITLGGSDP-KNL--TLKVLAELE--QKNVNLHIVVGSSNPT----------LKNLRKRA---EKYPNINLYID- 217 (318)
T ss_pred chheEEEEccCCCh-hhh--HHHHHHHhh--ccCeeEEEEecCCCcc----------hhHHHHHH---hhCCCeeeEec-
Confidence 34457888888886 544 344445553 2235788899976431 23333444 44567776555
Q ss_pred CCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCC--EEE--cCCCCchhhhccCCceEEeCC---CCHHHHHH
Q 001492 558 KQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLP--MVA--TKNGGPVDIHRALNNGLLVDP---HDQQAIAD 630 (1067)
Q Consensus 558 ~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~P--VVa--t~~Gg~~eiv~~~~~Gllv~p---~d~~~la~ 630 (1067)
.++++.++..| |..|.. -|.|+.||+..|+| +|. .+--........ -|+..+- ........
T Consensus 218 -~~dma~LMke~----d~aI~A-----aGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~--lg~~~~l~~~l~~~~~~~ 285 (318)
T COG3980 218 -TNDMAELMKEA----DLAISA-----AGSTLYEALLLGVPSLVLPLAENQIATAKEFEA--LGIIKQLGYHLKDLAKDY 285 (318)
T ss_pred -chhHHHHHHhc----chheec-----cchHHHHHHHhcCCceEEeeeccHHHHHHHHHh--cCchhhccCCCchHHHHH
Confidence 57899999999 888865 48999999999999 332 322111111111 1222211 23567777
Q ss_pred HHHHhhcCHHHHHHHHHH
Q 001492 631 ALLKLVSEKNLWVECRKN 648 (1067)
Q Consensus 631 aL~~ll~d~~~~~~~~~~ 648 (1067)
.+.++.+|+..+..+...
T Consensus 286 ~~~~i~~d~~~rk~l~~~ 303 (318)
T COG3980 286 EILQIQKDYARRKNLSFG 303 (318)
T ss_pred HHHHhhhCHHHhhhhhhc
Confidence 788888888876655443
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.31 Score=54.25 Aligned_cols=169 Identities=14% Similarity=0.034 Sum_probs=109.1
Q ss_pred CcEEEEEeC-CCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcE-EeCCCC
Q 001492 480 KPMILALSR-PDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQV-AYPKHH 557 (1067)
Q Consensus 480 ~~~Il~vgR-ld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V-~~~g~~ 557 (1067)
.++.+-+|. =|+.-+....++++.+.. ..++.++++=+ +..++++|..++.+...++--.+++ .+...+
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~----~~~v~ii~Pls-----Yp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l 215 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQF----GDNVKIIVPMG-----YPANNQAYIEEVRQAGLALFGAENFQILTEKL 215 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHh----CCCeEEEEECC-----cCCCCHHHHHHHHHHHHHhcCcccEEehhhhC
Confidence 355555665 567888888888887663 34666666433 1224567888888888887553455 457789
Q ss_pred CCCCHHHHHHHhhcCCcEEEecC-CCCCCCHHHHHHHHcCCCEEEcC-CCCchhhhccCCceEEeCCC--CHHHHHHHHH
Q 001492 558 KQYDVPEIYRLAAKTKGVFINPA-LVEPFGLTLIEAAAHGLPMVATK-NGGPVDIHRALNNGLLVDPH--DQQAIADALL 633 (1067)
Q Consensus 558 ~~~dl~~ly~~A~~~~dV~v~ps-~~EgfgltllEAmA~G~PVVat~-~Gg~~eiv~~~~~Gllv~p~--d~~~la~aL~ 633 (1067)
+.+|..++++.| |+.++-- ..+|+|..++ .+..|+||+-+. +.-..++.+.+. -++++.+ |...+.++
T Consensus 216 ~f~eYl~lL~~~----Dl~~f~~~RQQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~e~gv-~Vlf~~d~L~~~~v~e~-- 287 (322)
T PRK02797 216 PFDDYLALLRQC----DLGYFIFARQQGIGTLCL-LIQLGKPVVLSRDNPFWQDLTEQGL-PVLFTGDDLDEDIVREA-- 287 (322)
T ss_pred CHHHHHHHHHhC----CEEEEeechhhHHhHHHH-HHHCCCcEEEecCCchHHHHHhCCC-eEEecCCcccHHHHHHH--
Confidence 999999999999 9988875 4578886543 688999999875 566677655433 2334432 22222221
Q ss_pred HhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHh
Q 001492 634 KLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRM 674 (1067)
Q Consensus 634 ~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~ 674 (1067)
.+++...-++.+ .|+-+...+.|.+++.....
T Consensus 288 --------~rql~~~dk~~I-~Ff~pn~~~~W~~~l~~~~g 319 (322)
T PRK02797 288 --------QRQLASVDKNII-AFFSPNYLQGWRNALAIAAG 319 (322)
T ss_pred --------HHHHHhhCccee-eecCHhHHHHHHHHHHHhhC
Confidence 111222222222 38989888888888876543
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0041 Score=70.75 Aligned_cols=65 Identities=15% Similarity=0.167 Sum_probs=48.3
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCC---HHHHHHHHHhcCCCCCCCCEEEEcC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMP---VSETIEFLNSMKIEANEFDALICSS 850 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~---~~~~~~~l~~l~i~~~~~d~~I~~n 850 (1067)
+|++|+||||.+.+ .+.+...++|++|+++| + .|+++|+|+ ...+.+.|..+|++. .++.++++.
T Consensus 30 ~~~~D~DGtl~~~~-~~~~ga~e~l~~lr~~g----~-~~~~~TN~~~~~~~~~~~~l~~lGi~~-~~~~I~ts~ 97 (311)
T PLN02645 30 TFIFDCDGVIWKGD-KLIEGVPETLDMLRSMG----K-KLVFVTNNSTKSRAQYGKKFESLGLNV-TEEEIFSSS 97 (311)
T ss_pred EEEEeCcCCeEeCC-ccCcCHHHHHHHHHHCC----C-EEEEEeCCCCCCHHHHHHHHHHCCCCC-ChhhEeehH
Confidence 44459999988765 45588899999999997 6 899999998 444455557788863 456566553
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=96.70 E-value=1.8 Score=51.92 Aligned_cols=82 Identities=15% Similarity=0.140 Sum_probs=53.8
Q ss_pred cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc----hhhhcc-CCceEEeCC--
Q 001492 550 QVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----VDIHRA-LNNGLLVDP-- 622 (1067)
Q Consensus 550 ~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~----~eiv~~-~~~Gllv~p-- 622 (1067)
+..+.++.|+.+ ++..++ .+.||.= -|+ .+++||+++|+|+|+-...+= ...+.+ ...|+.++.
T Consensus 325 ~g~v~~w~PQ~~---iL~h~~--vg~FitH---~G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~ 395 (456)
T PLN02210 325 QGVVLEWSPQEK---ILSHMA--ISCFVTH---CGW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDA 395 (456)
T ss_pred CeEEEecCCHHH---HhcCcC--cCeEEee---CCc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccc
Confidence 334558887754 666661 1356632 233 488999999999999765432 223333 467877742
Q ss_pred ----CCHHHHHHHHHHhhcCHH
Q 001492 623 ----HDQQAIADALLKLVSEKN 640 (1067)
Q Consensus 623 ----~d~~~la~aL~~ll~d~~ 640 (1067)
-+.+++++++.+++.+++
T Consensus 396 ~~~~~~~~~l~~av~~~m~~~~ 417 (456)
T PLN02210 396 VDGELKVEEVERCIEAVTEGPA 417 (456)
T ss_pred cCCcCCHHHHHHHHHHHhcCch
Confidence 377899999999998754
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.013 Score=76.79 Aligned_cols=40 Identities=10% Similarity=-0.008 Sum_probs=36.8
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i 838 (1067)
.+-+.++++|+++++.| + .++++|||++.++..+.+++|+
T Consensus 568 plr~~v~~aI~~l~~~G----i-~v~~~TGd~~~ta~~ia~~~gi 607 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAG----I-KVIMVTGDHPITAKAIAKGVGI 607 (997)
T ss_pred CChHHHHHHHHHHHHCC----C-eEEEECCCCHHHHHHHHHHcCC
Confidence 35588999999999998 8 9999999999999999999887
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=96.68 E-value=1.1 Score=53.90 Aligned_cols=94 Identities=17% Similarity=0.158 Sum_probs=59.3
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC----chh-hhccCCceEEeC--
Q 001492 549 GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG----PVD-IHRALNNGLLVD-- 621 (1067)
Q Consensus 549 ~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg----~~e-iv~~~~~Gllv~-- 621 (1067)
+++.+.++.|+.++-.. ..+ +.||.- +--.+++||+.+|+|+|+-..-+ ... +++.-.-|+-+.
T Consensus 337 ~~g~v~~W~PQ~~iL~H-~~v----~~FvtH----~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~ 407 (480)
T PLN02555 337 DKGKIVQWCPQEKVLAH-PSV----ACFVTH----CGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRG 407 (480)
T ss_pred CceEEEecCCHHHHhCC-Ccc----CeEEec----CCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCC
Confidence 46677788876553221 233 566632 22458999999999999976533 122 222225676662
Q ss_pred ---C--CCHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Q 001492 622 ---P--HDQQAIADALLKLVSEKNLWVECRKNGWKN 652 (1067)
Q Consensus 622 ---p--~d~~~la~aL~~ll~d~~~~~~~~~~~~~~ 652 (1067)
. -+.++++.+|.+++.+++ ..++++++++.
T Consensus 408 ~~~~~~v~~~~v~~~v~~vm~~~~-g~~~r~ra~~l 442 (480)
T PLN02555 408 EAENKLITREEVAECLLEATVGEK-AAELKQNALKW 442 (480)
T ss_pred ccccCcCcHHHHHHHHHHHhcCch-HHHHHHHHHHH
Confidence 1 257899999999997643 45566666544
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.014 Score=63.53 Aligned_cols=66 Identities=15% Similarity=0.095 Sum_probs=52.0
Q ss_pred EEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEEC---CCCHHHHHHHHHh-cCCCCCCCCEEEEcCCce
Q 001492 781 ALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALST---AMPVSETIEFLNS-MKIEANEFDALICSSGGE 853 (1067)
Q Consensus 781 a~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaT---GR~~~~~~~~l~~-l~i~~~~~d~~I~~nGa~ 853 (1067)
.+|+||||.+.+..+ +.+.++|+.++++| + .+++.| ||+...+.+.|.+ ++++. .++-+|++....
T Consensus 2 lfD~DGvL~~~~~~~-~~a~e~i~~l~~~g----~-~~~~~tN~~~~~~~~~~~~l~~~~g~~~-~~~~iits~~~~ 71 (236)
T TIGR01460 2 LFDIDGVLWLGHKPI-PGAAEALNRLRAKG----K-PVVFLTNNSSRSEEDYAEKLSSLLGVDV-SPDQIITSGSVT 71 (236)
T ss_pred EEeCcCccCcCCccC-cCHHHHHHHHHHCC----C-eEEEEECCCCCCHHHHHHHHHHhcCCCC-CHHHeeeHHHHH
Confidence 459999988875544 48899999999886 5 677877 9999999998888 78763 567788875544
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0042 Score=60.93 Aligned_cols=54 Identities=17% Similarity=0.178 Sum_probs=43.2
Q ss_pred EEEEeCCCCCCCCc----h--------hhHHHHHHHHHHHHhcCCCCceeEEEEECCC-CHHHHHHHHHhcC
Q 001492 779 VIALDCYDSKGAPD----K--------KMIQIMYDVFKAVRLDHQTARVTGFALSTAM-PVSETIEFLNSMK 837 (1067)
Q Consensus 779 lia~DiDGTLl~~~----~--------~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR-~~~~~~~~l~~l~ 837 (1067)
+|++|+||||.+.. . .+-+.+.+.|+.|+++| + .++|+|++ +...+...++..+
T Consensus 2 li~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~g----~-~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 2 VIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKNG----F-LLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred EEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHCC----e-EEEEEeCCCCHHHHHHHHHhcc
Confidence 56669999977662 1 25679999999999987 8 89999999 7777777788765
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.37 Score=58.70 Aligned_cols=152 Identities=14% Similarity=0.142 Sum_probs=86.1
Q ss_pred hhhccCCCCcEE-EEEe-CCC-CCCCHHHHHHHHH--hcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcC
Q 001492 472 MRFLTNPHKPMI-LALS-RPD-PKKNITTLLKAFG--ECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYD 546 (1067)
Q Consensus 472 ~~~~~~~~~~~I-l~vg-Rld-~~Kgi~~ll~A~~--~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~ 546 (1067)
.++..++++++| +.-| |-. -++.++.+++|+. .+. + ++.+++...+.. ....+...+...+
T Consensus 405 ~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~---~--~l~fvvp~a~~~---------~~~~i~~~~~~~~ 470 (608)
T PRK01021 405 EQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLA---S--THQLLVSSANPK---------YDHLILEVLQQEG 470 (608)
T ss_pred HHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhc---c--CeEEEEecCchh---------hHHHHHHHHhhcC
Confidence 344445566654 3334 443 3567889999998 552 2 355666543321 1223334443322
Q ss_pred CCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEc-CCCCchh-----hhc--------
Q 001492 547 LYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVAT-KNGGPVD-----IHR-------- 612 (1067)
Q Consensus 547 l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat-~~Gg~~e-----iv~-------- 612 (1067)
..+...+.+ .+-.+++++| |+.+..| |.+.+|++.+|+|+|.. ..+...- +++
T Consensus 471 ~~~~~ii~~----~~~~~~m~aa----D~aLaaS-----GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsL 537 (608)
T PRK01021 471 CLHSHIVPS----QFRYELMREC----DCALAKC-----GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSL 537 (608)
T ss_pred CCCeEEecC----cchHHHHHhc----CeeeecC-----CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeeh
Confidence 111112222 1246899999 9999874 99999999999999884 3332211 111
Q ss_pred -----cC--CceEE--eCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q 001492 613 -----AL--NNGLL--VDPHDQQAIADALLKLVSEKNLWVECRKNGWK 651 (1067)
Q Consensus 613 -----~~--~~Gll--v~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~ 651 (1067)
+. ..-++ =+.-+++.+++++ +++.|++.++++.+...+
T Consensus 538 pNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~~l~~ 584 (608)
T PRK01021 538 PNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKDACRD 584 (608)
T ss_pred hHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHHHHHH
Confidence 00 01122 1334789999996 888998877666554443
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.02 Score=63.86 Aligned_cols=51 Identities=14% Similarity=0.117 Sum_probs=43.0
Q ss_pred ecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCce-EEEeCCCc
Q 001492 963 VPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHK-TLIMKGVV 1016 (1067)
Q Consensus 963 ~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~-gVaMgNA~ 1016 (1067)
++..-.+...+.++++++|++++++++ |||+.+ | ++|-+.+|. ++.+.++.
T Consensus 153 ~~~~Kp~p~~~~~~~~~~g~~~~~~l~-IGD~~~-D-i~aA~~aGi~~i~v~~G~ 204 (272)
T PRK13223 153 LPQKKPDPAALLFVMKMAGVPPSQSLF-VGDSRS-D-VLAAKAAGVQCVALSYGY 204 (272)
T ss_pred CCCCCCCcHHHHHHHHHhCCChhHEEE-ECCCHH-H-HHHHHHCCCeEEEEecCC
Confidence 345556778999999999999999999 999999 9 999999996 56665544
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.017 Score=75.27 Aligned_cols=41 Identities=10% Similarity=-0.011 Sum_probs=37.0
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
.+-+.++++|+++++.| + +++++||.+...+..+.+++|+.
T Consensus 537 plr~~v~e~I~~l~~aG----I-~v~miTGD~~~tA~~ia~~~gi~ 577 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAG----I-RVIMITGDNKETAEAICRRIGIF 577 (917)
T ss_pred CCchhHHHHHHHHHHCC----C-EEEEecCCCHHHHHHHHHHcCCC
Confidence 35588999999999998 8 99999999999999999998873
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.022 Score=70.69 Aligned_cols=56 Identities=9% Similarity=-0.017 Sum_probs=43.9
Q ss_pred eEEEEEEeCCCCCC---CCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCC
Q 001492 776 RLIVIALDCYDSKG---APDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838 (1067)
Q Consensus 776 klllia~DiDGTLl---~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i 838 (1067)
+.++++.| ++++ .=...+-+..+++++++++.| + ++++.||-....+..+.+++|+
T Consensus 427 r~l~va~~--~~~lG~i~l~D~~Rp~a~eaI~~l~~~G----i-~v~miTGD~~~ta~~iA~~lGI 485 (675)
T TIGR01497 427 TPLVVCED--NRIYGVIYLKDIVKGGIKERFAQLRKMG----I-KTIMITGDNRLTAAAIAAEAGV 485 (675)
T ss_pred eEEEEEEC--CEEEEEEEecccchhHHHHHHHHHHHCC----C-EEEEEcCCCHHHHHHHHHHcCC
Confidence 55667655 4411 112346689999999999998 8 9999999999999999999887
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.028 Score=71.62 Aligned_cols=59 Identities=12% Similarity=-0.057 Sum_probs=45.8
Q ss_pred eEEEEEE-eCCC--C---CCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 776 RLIVIAL-DCYD--S---KGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 776 klllia~-DiDG--T---Ll~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
+.+.+|+ |.++ + +..=...+-+.++++|+++++.| + ++++.||.+...+..+.+++||.
T Consensus 418 rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aG----I-~v~miTGD~~~tA~~IA~~lGI~ 482 (755)
T TIGR01647 418 RALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERARHLG----V-EVKMVTGDHLAIAKETARRLGLG 482 (755)
T ss_pred EEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHHHHCC----C-eEEEECCCCHHHHHHHHHHcCCC
Confidence 6777777 4322 3 11112346689999999999998 9 99999999999999999999984
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.031 Score=73.07 Aligned_cols=41 Identities=5% Similarity=0.015 Sum_probs=37.5
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
.+-+.++++|+++++.| + ++++.||-+..++..+.+++|+.
T Consensus 579 plr~~~~~aI~~l~~aG----I-~v~miTGD~~~tA~~iA~~~GI~ 619 (941)
T TIGR01517 579 PLRPGVREAVQECQRAG----I-TVRMVTGDNIDTAKAIARNCGIL 619 (941)
T ss_pred CCchhHHHHHHHHHHCC----C-EEEEECCCChHHHHHHHHHcCCC
Confidence 45689999999999998 9 99999999999999999999884
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.35 Score=54.53 Aligned_cols=143 Identities=12% Similarity=0.062 Sum_probs=93.3
Q ss_pred CcEEEEEeC-CCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEe-CCCC
Q 001492 480 KPMILALSR-PDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAY-PKHH 557 (1067)
Q Consensus 480 ~~~Il~vgR-ld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~-~g~~ 557 (1067)
+++-+-+|. -++.-+....++++.... ..++.++++=+= ...+++|..++.+...++--.+++.. ..++
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~----~~~~kIivPLsY-----g~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~m 254 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQF----GDDVKIIVPLSY-----GANNQAYIQQVIQAGKELFGAENFQILTEFM 254 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhc----CCCeEEEEECCC-----CCchHHHHHHHHHHHHHhcCccceeEhhhhC
Confidence 345445555 578888888888777642 245666554321 11235678888888887754456654 5799
Q ss_pred CCCCHHHHHHHhhcCCcEEEecCC-CCCCCHHHHHHHHcCCCEEEcCCCC-chhhhccCCceEEe--CCCCHHHHHHHHH
Q 001492 558 KQYDVPEIYRLAAKTKGVFINPAL-VEPFGLTLIEAAAHGLPMVATKNGG-PVDIHRALNNGLLV--DPHDQQAIADALL 633 (1067)
Q Consensus 558 ~~~dl~~ly~~A~~~~dV~v~ps~-~EgfgltllEAmA~G~PVVat~~Gg-~~eiv~~~~~Gllv--~p~d~~~la~aL~ 633 (1067)
|.+|..++++.| |+.++... ..++|..+ =.+.+|+||+-+...- ..++.+.+. -+++ +.-|...++++=+
T Consensus 255 pf~eYl~lL~~c----Dl~if~~~RQQgiGnI~-lLl~~G~~v~L~~~np~~~~l~~~~i-pVlf~~d~L~~~~v~ea~r 328 (360)
T PF07429_consen 255 PFDEYLALLSRC----DLGIFNHNRQQGIGNIC-LLLQLGKKVFLSRDNPFWQDLKEQGI-PVLFYGDELDEALVREAQR 328 (360)
T ss_pred CHHHHHHHHHhC----CEEEEeechhhhHhHHH-HHHHcCCeEEEecCChHHHHHHhCCC-eEEeccccCCHHHHHHHHH
Confidence 999999999999 99999975 57888544 4689999999987544 455544322 2333 3445566666555
Q ss_pred Hhhc
Q 001492 634 KLVS 637 (1067)
Q Consensus 634 ~ll~ 637 (1067)
++..
T Consensus 329 ql~~ 332 (360)
T PF07429_consen 329 QLAN 332 (360)
T ss_pred HHhh
Confidence 5544
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.042 Score=67.70 Aligned_cols=140 Identities=15% Similarity=0.126 Sum_probs=103.9
Q ss_pred cCCCCcEEEEEeCCCCCCCHHHHHHHHHhccc-c--cCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEE
Q 001492 476 TNPHKPMILALSRPDPKKNITTLLKAFGECRP-L--RELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVA 552 (1067)
Q Consensus 476 ~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~-l--~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~ 552 (1067)
.+|+..+++++-|+...|.....+.=...+.. + ...|.+.+|.|+....... .....+..|+..++..+...+|.
T Consensus 483 ~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~--~aK~iIk~I~~~a~~in~~lkVv 560 (750)
T COG0058 483 VDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADY--AAKEIIKLINDVADVINNKLKVV 560 (750)
T ss_pred cCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcch--HHHHHHHHHHHHHHhhcccceEE
Confidence 35778899999999988866555433333321 1 2345677666655322211 22467788888888887777899
Q ss_pred eCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCCEEEcCCCCchhhhc--cCCceEEeC
Q 001492 553 YPKHHKQYDVPEIYRLAAKTKGVFINPAL--VEPFGLTLIEAAAHGLPMVATKNGGPVDIHR--ALNNGLLVD 621 (1067)
Q Consensus 553 ~~g~~~~~dl~~ly~~A~~~~dV~v~ps~--~EgfgltllEAmA~G~PVVat~~Gg~~eiv~--~~~~Gllv~ 621 (1067)
|....+-+-...++.+| ||-.+.|. .|..|..-+=|+--|.|-|+|..|+..|+.+ .+.||+++-
T Consensus 561 Fl~nYdvslA~~iipa~----Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG 629 (750)
T COG0058 561 FLPNYDVSLAELLIPAA----DVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFG 629 (750)
T ss_pred EeCCCChhHHHhhcccc----cccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeC
Confidence 98887655556667777 99999887 5999999999999999999999999999997 788999995
|
|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.008 Score=74.73 Aligned_cols=148 Identities=12% Similarity=0.128 Sum_probs=108.1
Q ss_pred ccCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCCc-----EEEEEecC--CChhhhhccchHHHHHHHHHHHhc-
Q 001492 475 LTNPHKPMILALSRPDPKKNITT-LLKAFGECRPLRELAN-----LTLIMGNR--DDIEEMSSGNASVLITVLKLIDKY- 545 (1067)
Q Consensus 475 ~~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~l~~~~~-----l~lIvG~~--~~~~~l~~~~~~~~~~i~~l~~~~- 545 (1067)
..+|+..+++++-|+...|...+ ++..+..+.++...|+ .++|.|+. |.+.. ...++..|+..++..
T Consensus 538 ~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~----aK~iIk~I~~va~~in 613 (815)
T PRK14986 538 VVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYM----AKHIIHLINDVAKVIN 613 (815)
T ss_pred ccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHH----HHHHHHHHHHHHHHhc
Confidence 35778889999999999998777 7777665554444432 55555554 22222 245677777777722
Q ss_pred ---CCCC--cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCCEEEcCCCCchhhhcc--CCc
Q 001492 546 ---DLYG--QVAYPKHHKQYDVPEIYRLAAKTKGVFINPAL--VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRA--LNN 616 (1067)
Q Consensus 546 ---~l~~--~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~--~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~--~~~ 616 (1067)
.+.+ +|.|+.-..-+--..++.+| ||-.+.|. .|..|..-+=+|.-|.+.++|..|...|+.++ +.|
T Consensus 614 ~Dp~v~~~lkVVFlenY~vslAe~lipg~----Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN 689 (815)
T PRK14986 614 NDPQIGDKLKVVFIPNYSVSLAQLIIPAA----DLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEEN 689 (815)
T ss_pred cChhhcCceeEEEeCCCCHHHHHHhhhhh----hhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCc
Confidence 3344 78888776655556677777 99999887 69999999999999999999999999999876 789
Q ss_pred eEEeCCCCHHHHHHH
Q 001492 617 GLLVDPHDQQAIADA 631 (1067)
Q Consensus 617 Gllv~p~d~~~la~a 631 (1067)
|+++-. +.+++.+-
T Consensus 690 ~~~fG~-~~~ev~~~ 703 (815)
T PRK14986 690 IFIFGN-TAEEVEAL 703 (815)
T ss_pred EEEeCC-CHHHHHHH
Confidence 999963 56665543
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.064 Score=60.79 Aligned_cols=112 Identities=13% Similarity=0.074 Sum_probs=67.6
Q ss_pred cCCCCcEEEEEeCCCCCC--CHH---HHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCc
Q 001492 476 TNPHKPMILALSRPDPKK--NIT---TLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQ 550 (1067)
Q Consensus 476 ~~~~~~~Il~vgRld~~K--gi~---~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~ 550 (1067)
..+...+.+.||.....- +-+ .+++.+..+. +....-.+|..++-... +....+.+..+ -.+.
T Consensus 143 ~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~vttSRRTp~-------~~~~~L~~~~~---~~~~ 210 (311)
T PF06258_consen 143 ALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALA--AAYGGSLLVTTSRRTPP-------EAEAALRELLK---DNPG 210 (311)
T ss_pred cCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHH--HhCCCeEEEEcCCCCcH-------HHHHHHHHhhc---CCCc
Confidence 345556677888754322 333 4555555553 22232234667664332 23344444443 3356
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC
Q 001492 551 VAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG 606 (1067)
Q Consensus 551 V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg 606 (1067)
+.+...-+..=+..+|..| |.++++.-.-. -+.||+++|+||..-...+
T Consensus 211 ~~~~~~~~~nPy~~~La~a----d~i~VT~DSvS---MvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 211 VYIWDGTGENPYLGFLAAA----DAIVVTEDSVS---MVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred eEEecCCCCCcHHHHHHhC----CEEEEcCccHH---HHHHHHHcCCCEEEecCCC
Confidence 6555555556699999999 99999854433 3789999999999887655
|
The function of this family is unknown. |
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=96.26 E-value=3.5 Score=49.59 Aligned_cols=92 Identities=14% Similarity=0.152 Sum_probs=55.4
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc----hhhh-ccCCceEEeC----
Q 001492 551 VAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----VDIH-RALNNGLLVD---- 621 (1067)
Q Consensus 551 V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~----~eiv-~~~~~Gllv~---- 621 (1067)
+.+.++.|+.++-. .. ..+.||.- +--.+.+||+.+|+|+|+-...+= ...+ +....|+-+.
T Consensus 337 l~v~~W~PQ~~vL~---h~--~vg~fvtH----~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~ 407 (470)
T PLN03015 337 LVVTQWAPQVEILS---HR--SIGGFLSH----CGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPS 407 (470)
T ss_pred eEEEecCCHHHHhc---cC--ccCeEEec----CCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEeccccc
Confidence 45668888776544 33 11456632 223588999999999999765332 1222 3334565553
Q ss_pred --CCCHHHHHHHHHHhhcC-HHHHHHHHHHHHH
Q 001492 622 --PHDQQAIADALLKLVSE-KNLWVECRKNGWK 651 (1067)
Q Consensus 622 --p~d~~~la~aL~~ll~d-~~~~~~~~~~~~~ 651 (1067)
.-..++++++|++++.. .+.-+++++++++
T Consensus 408 ~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~ 440 (470)
T PLN03015 408 EKVIGREEVASLVRKIVAEEDEEGQKIRAKAEE 440 (470)
T ss_pred CCccCHHHHHHHHHHHHccCcccHHHHHHHHHH
Confidence 13678999999999952 1233455555543
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.096 Score=57.78 Aligned_cols=200 Identities=11% Similarity=0.057 Sum_probs=102.1
Q ss_pred EEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEEC---CCCHHHHHHHHHh-cCCCCCCCCEEEEcCCceEE
Q 001492 780 IALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALST---AMPVSETIEFLNS-MKIEANEFDALICSSGGEMY 855 (1067)
Q Consensus 780 ia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaT---GR~~~~~~~~l~~-l~i~~~~~d~~I~~nGa~I~ 855 (1067)
+.+|+|||+.+. .+.-+...++|+.|+++| + .+++.| .|+...+..-|.. .+++ ..++.++++.=+-..
T Consensus 11 ~l~DlDGvl~~G-~~~ipga~e~l~~L~~~g----~-~~iflTNn~~~s~~~~~~~L~~~~~~~-~~~~~i~TS~~at~~ 83 (269)
T COG0647 11 FLFDLDGVLYRG-NEAIPGAAEALKRLKAAG----K-PVIFLTNNSTRSREVVAARLSSLGGVD-VTPDDIVTSGDATAD 83 (269)
T ss_pred EEEcCcCceEeC-CccCchHHHHHHHHHHcC----C-eEEEEeCCCCCCHHHHHHHHHhhcCCC-CCHHHeecHHHHHHH
Confidence 444999997765 456678889999999997 5 555654 5566667778888 4444 345666665321111
Q ss_pred ecCCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCCchHHH
Q 001492 856 YPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRI 935 (1067)
Q Consensus 856 ~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~ 935 (1067)
+-. +. ....--+..+.+.+.+.+....-..... .+. ....++....+.......+
T Consensus 84 ~l~-----------~~-~~~~kv~viG~~~l~~~l~~~G~~~~~~------------~~~-~~~d~Vv~g~d~~~~~e~l 138 (269)
T COG0647 84 YLA-----------KQ-KPGKKVYVIGEEGLKEELEGAGFELVDE------------EEP-ARVDAVVVGLDRTLTYEKL 138 (269)
T ss_pred HHH-----------hh-CCCCEEEEECCcchHHHHHhCCcEEecc------------CCC-CcccEEEEecCCCCCHHHH
Confidence 110 00 0000112223445555443322111111 001 1122333332222222222
Q ss_pred HHHHHHHHhcCCcEEEEEeeCCee---------------------EEEecCCCCHHH--HHHHHHHHhCCCcccEEEEec
Q 001492 936 DDLRQKLRMRGLRCHPMYCRNSTR---------------------MQIVPLLASRSQ--ALRYLFVRWRLNVANMFVILG 992 (1067)
Q Consensus 936 ~el~~~L~~~~~~~~v~~s~~~~~---------------------lEI~p~gasKg~--AL~~L~~~~gi~~e~vva~fG 992 (1067)
.+....++.. +.++-+++... -...|.-+.|-. ..+..++.++.+.+++++ +|
T Consensus 139 ~~a~~~i~~g---~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~tg~~~~~~GKP~~~i~~~al~~~~~~~~~~~m-VG 214 (269)
T COG0647 139 AEALLAIAAG---APFIATNPDLTVPTERGLRPGAGAIAALLEQATGREPTVIGKPSPAIYEAALEKLGLDRSEVLM-VG 214 (269)
T ss_pred HHHHHHHHcC---CcEEEeCCCccccCCCCCccCcHHHHHHHHHhhCCcccccCCCCHHHHHHHHHHhCCCcccEEE-Ec
Confidence 2333333221 33333332110 122333445543 456678889999999999 99
Q ss_pred CCCCCChhhhhcCCceEE-EeCCCc
Q 001492 993 ESGDTDYEELISGAHKTL-IMKGVV 1016 (1067)
Q Consensus 993 Ds~N~D~~eML~~ag~gV-aMgNA~ 1016 (1067)
|+.+|| +.+=..+|..- .+--+.
T Consensus 215 D~~~TD-I~~a~~~G~~t~LV~TGv 238 (269)
T COG0647 215 DRLDTD-ILGAKAAGLDTLLVLTGV 238 (269)
T ss_pred CCchhh-HHHHHHcCCCEEEEccCC
Confidence 999999 88877777643 444444
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.052 Score=70.23 Aligned_cols=41 Identities=10% Similarity=0.013 Sum_probs=37.4
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
.+-+.++++|+++++.| + .+++.||-+...+..+.+++||.
T Consensus 515 p~R~~~~~aI~~l~~aG----I-~vvmiTGD~~~tA~aIA~~lGI~ 555 (867)
T TIGR01524 515 PPKESTKEAIAALFKNG----I-NVKVLTGDNEIVTARICQEVGID 555 (867)
T ss_pred CCchhHHHHHHHHHHCC----C-EEEEEcCCCHHHHHHHHHHcCCC
Confidence 35588999999999998 9 99999999999999999999883
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.071 Score=69.30 Aligned_cols=59 Identities=8% Similarity=-0.005 Sum_probs=46.1
Q ss_pred eEEEEEEeC---CCCC---CCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 776 RLIVIALDC---YDSK---GAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 776 klllia~Di---DGTL---l~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
|.+.+|++- |.|+ ..=...+-+.++++|+.+++.| + +++++||-+...+..+.+++|+.
T Consensus 504 rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~G----i-~v~miTGD~~~tA~~ia~~~Gi~ 568 (884)
T TIGR01522 504 RVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITGG----V-RIIMITGDSQETAVSIARRLGMP 568 (884)
T ss_pred EEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHHCC----C-eEEEECCCCHHHHHHHHHHcCCC
Confidence 677777763 2231 1112346689999999999997 8 99999999999999999999884
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.054 Score=70.29 Aligned_cols=41 Identities=15% Similarity=0.047 Sum_probs=37.7
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
.+-++++++|+++++.| | .+++.||=+...+..+.+++||.
T Consensus 550 p~R~~a~~aI~~l~~aG----I-~v~miTGD~~~tA~aIA~~lGI~ 590 (903)
T PRK15122 550 PPKESAAPAIAALRENG----V-AVKVLTGDNPIVTAKICREVGLE 590 (903)
T ss_pred ccHHHHHHHHHHHHHCC----C-eEEEECCCCHHHHHHHHHHcCCC
Confidence 46689999999999998 9 99999999999999999999883
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.017 Score=74.68 Aligned_cols=97 Identities=16% Similarity=0.175 Sum_probs=67.7
Q ss_pred HHHHHHHHHhcCCcEEEEEeeCC--------------eeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChh
Q 001492 935 IDDLRQKLRMRGLRCHPMYCRNS--------------TRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYE 1000 (1067)
Q Consensus 935 ~~el~~~L~~~~~~~~v~~s~~~--------------~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~ 1000 (1067)
..+..+.|+..+..+.++...+. .+-++.|. .|..+++.+.. ..+++++ |||+.| | .
T Consensus 655 a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~~p~--~K~~~i~~l~~----~~~~v~~-vGDg~n-D-~ 725 (834)
T PRK10671 655 SVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGVLPD--GKAEAIKRLQS----QGRQVAM-VGDGIN-D-A 725 (834)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCCCHH--HHHHHHHHHhh----cCCEEEE-EeCCHH-H-H
Confidence 44555666666655444332211 13344554 49888887754 3456777 999999 9 9
Q ss_pred hhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHH
Q 001492 1001 ELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALR 1058 (1067)
Q Consensus 1001 eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~ 1058 (1067)
+||+.+|.||+|||+. +..+..|+ ++....+.++|.++++
T Consensus 726 ~al~~Agvgia~g~g~---~~a~~~ad---------------~vl~~~~~~~i~~~i~ 765 (834)
T PRK10671 726 PALAQADVGIAMGGGS---DVAIETAA---------------ITLMRHSLMGVADALA 765 (834)
T ss_pred HHHHhCCeeEEecCCC---HHHHHhCC---------------EEEecCCHHHHHHHHH
Confidence 9999999999999988 55566666 6666778899999986
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.034 Score=73.11 Aligned_cols=41 Identities=5% Similarity=-0.108 Sum_probs=37.3
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
.+-+.++++|+.+++.| | ++++.||....++..+.+++||.
T Consensus 646 p~r~~v~~aI~~l~~aG----I-kv~MiTGD~~~tA~~iA~~~Gi~ 686 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAG----I-NVHMLTGDFPETAKAIAQEVGII 686 (1053)
T ss_pred CCchhHHHHHHHHHHCC----C-EEEEECCCCHHHHHHHHHHcCCC
Confidence 35588999999999998 9 99999999999999999999983
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.03 E-value=5.3 Score=48.32 Aligned_cols=140 Identities=14% Similarity=0.141 Sum_probs=76.5
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCC
Q 001492 479 HKPMILALSRPD--PKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKH 556 (1067)
Q Consensus 479 ~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 556 (1067)
+..+.+++|.+. ..+.+..++.+++.+. ..+..+++...... .......-..+.+.+ .++..+.++
T Consensus 280 ~svvyvsfGS~~~~~~~~~~ela~~l~~~~-----~~flw~~~~~~~~~--~~~~~~lp~~~~er~-----~~rg~v~~w 347 (475)
T PLN02167 280 SSVVFLCFGSLGSLPAPQIKEIAQALELVG-----CRFLWSIRTNPAEY--ASPYEPLPEGFMDRV-----MGRGLVCGW 347 (475)
T ss_pred CceEEEeecccccCCHHHHHHHHHHHHhCC-----CcEEEEEecCcccc--cchhhhCChHHHHHh-----ccCeeeecc
Confidence 346677888763 3445677777776652 13444555321100 000000001111111 234556688
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc----h-hhhccCCceEEeCC---------
Q 001492 557 HKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----V-DIHRALNNGLLVDP--------- 622 (1067)
Q Consensus 557 ~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~----~-eiv~~~~~Gllv~p--------- 622 (1067)
.|+.+ ++...+ .+.||.= -|+ .+++||+++|+|+|+-...+= . -+++....|+.+..
T Consensus 348 ~PQ~~---iL~h~~--vg~fvtH---~G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~ 418 (475)
T PLN02167 348 APQVE---ILAHKA--IGGFVSH---CGW-NSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEI 418 (475)
T ss_pred CCHHH---HhcCcc--cCeEEee---CCc-ccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCc
Confidence 77654 555531 1556632 233 488999999999999764332 1 22444456776642
Q ss_pred CCHHHHHHHHHHhhcCH
Q 001492 623 HDQQAIADALLKLVSEK 639 (1067)
Q Consensus 623 ~d~~~la~aL~~ll~d~ 639 (1067)
-+.++++++|.+++.++
T Consensus 419 ~~~~~l~~av~~~m~~~ 435 (475)
T PLN02167 419 VKADEIAGAVRSLMDGE 435 (475)
T ss_pred ccHHHHHHHHHHHhcCC
Confidence 26789999999999754
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.062 Score=69.69 Aligned_cols=41 Identities=10% Similarity=0.058 Sum_probs=37.6
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
.+-++++++|+++++.| | .+++.||=+...+..+.+++||.
T Consensus 550 p~R~~a~~aI~~l~~aG----I-~v~miTGD~~~tA~~IA~~lGI~ 590 (902)
T PRK10517 550 PPKETTAPALKALKASG----V-TVKILTGDSELVAAKVCHEVGLD 590 (902)
T ss_pred cchhhHHHHHHHHHHCC----C-EEEEEcCCCHHHHHHHHHHcCCC
Confidence 45689999999999998 9 99999999999999999999883
|
|
| >PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.023 Score=50.82 Aligned_cols=72 Identities=22% Similarity=0.220 Sum_probs=46.3
Q ss_pred cCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc--hhHHHHHHHhcC
Q 001492 250 SSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD--AGDSAALLSGAL 327 (1067)
Q Consensus 250 ~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~--a~~~a~~l~~~~ 327 (1067)
.+|.+++.+|+.+. -.....|.+-... .+++.+.- + .+.||||+|.+. .+.-+.+-++.+
T Consensus 13 tngLKVYYlP~~~~----~~~~t~Pt~~~~~-pl~R~Ili------r-------E~I~IVHgH~a~S~l~hE~i~hA~~m 74 (90)
T PF08288_consen 13 TNGLKVYYLPLKVF----YNQCTLPTLFGSF-PLLRNILI------R-------ERIDIVHGHQAFSTLCHEAILHARTM 74 (90)
T ss_pred CCCeEEEeecchhh----hcCcchHHHHHhh-HHHHHHHH------H-------cCeeEEEeehhhhHHHHHHHHHHHhC
Confidence 57999999998554 1222333322111 12222221 1 468999999874 355577788999
Q ss_pred CCcEEEEeCCCc
Q 001492 328 NVPMVLTGHSLG 339 (1067)
Q Consensus 328 giP~V~t~H~l~ 339 (1067)
|++.|+|-|++.
T Consensus 75 GlktVfTDHSLf 86 (90)
T PF08288_consen 75 GLKTVFTDHSLF 86 (90)
T ss_pred CCcEEeeccccc
Confidence 999999999984
|
These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.012 Score=57.79 Aligned_cols=57 Identities=9% Similarity=0.118 Sum_probs=45.3
Q ss_pred eEEEEEEeCCCCCCCC--------chhhHHHHHHHHHHHHhcCCCCceeEEEEECCCC--------HHHHHHHHHhcCCC
Q 001492 776 RLIVIALDCYDSKGAP--------DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMP--------VSETIEFLNSMKIE 839 (1067)
Q Consensus 776 klllia~DiDGTLl~~--------~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~--------~~~~~~~l~~l~i~ 839 (1067)
|++++ |+||||.+. +..+.+.+.++|+.|+++| + .++|+|+++ ...+..+++.+++.
T Consensus 1 k~~~~--D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g----~-~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~ 73 (132)
T TIGR01662 1 KGVVL--DLDGTLTDDVPYVDDEDERILYPEVPDALAELKEAG----Y-KVVIVTNQSGIGRGKFSSGRVARRLEELGVP 73 (132)
T ss_pred CEEEE--eCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHCC----C-EEEEEECCccccccHHHHHHHHHHHHHCCCC
Confidence 34455 999997751 2345688899999999987 7 899999998 77888999998874
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.019 Score=62.31 Aligned_cols=40 Identities=13% Similarity=0.054 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEE
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLI 1011 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVa 1011 (1067)
+...+.++++++|++++++++ |||+.+ | +.+-+.+|..++
T Consensus 153 ~p~~~~~~~~~l~~~p~~~l~-IGDs~~-D-i~aA~~aG~~~i 192 (229)
T PRK13226 153 HPLPLLVAAERIGVAPTDCVY-VGDDER-D-ILAARAAGMPSV 192 (229)
T ss_pred CHHHHHHHHHHhCCChhhEEE-eCCCHH-H-HHHHHHCCCcEE
Confidence 456799999999999999999 999999 9 999999997654
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=95.77 E-value=6.5 Score=47.21 Aligned_cols=145 Identities=16% Similarity=0.158 Sum_probs=77.2
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhh-ccchHHHHHHHHHHHhcCCCCcEEeCC
Q 001492 479 HKPMILALSRPD--PKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMS-SGNASVLITVLKLIDKYDLYGQVAYPK 555 (1067)
Q Consensus 479 ~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~-~~~~~~~~~i~~l~~~~~l~~~V~~~g 555 (1067)
+.-+.+++|.+. +.+-+..+..+++.+. . .+..++......+... ..............++. .++..+.+
T Consensus 261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s~----~-~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~--~~~g~v~~ 333 (455)
T PLN02152 261 SSVIYVSFGTMVELSKKQIEELARALIEGK----R-PFLWVITDKLNREAKIEGEEETEIEKIAGFRHEL--EEVGMIVS 333 (455)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHcC----C-CeEEEEecCcccccccccccccccccchhHHHhc--cCCeEEEe
Confidence 355677888764 4566777788887773 1 3333554321100000 00000000011222222 34566678
Q ss_pred CCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc----hhhhcc-CCceEEeC-----CCCH
Q 001492 556 HHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----VDIHRA-LNNGLLVD-----PHDQ 625 (1067)
Q Consensus 556 ~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~----~eiv~~-~~~Gllv~-----p~d~ 625 (1067)
+.|+.+ ++...+ .++||.- +-..+++||+.+|+|+|+-...+= ...+.+ -..|+-+. .-+.
T Consensus 334 W~PQ~~---iL~h~~--vg~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~ 404 (455)
T PLN02152 334 WCSQIE---VLRHRA--VGCFVTH----CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVER 404 (455)
T ss_pred eCCHHH---HhCCcc--cceEEee----CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCcH
Confidence 888654 555551 1345532 334589999999999999765332 222222 12455442 1267
Q ss_pred HHHHHHHHHhhcCH
Q 001492 626 QAIADALLKLVSEK 639 (1067)
Q Consensus 626 ~~la~aL~~ll~d~ 639 (1067)
+++++++.++++++
T Consensus 405 e~l~~av~~vm~~~ 418 (455)
T PLN02152 405 GEIRRCLEAVMEEK 418 (455)
T ss_pred HHHHHHHHHHHhhh
Confidence 89999999999754
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.021 Score=58.71 Aligned_cols=66 Identities=11% Similarity=0.134 Sum_probs=45.4
Q ss_pred CeEEEEEEeCCCCCCCCch-h-----------hHHHHHHHHHHHHhcCCCCceeEEEEECCCCH------------HHHH
Q 001492 775 RRLIVIALDCYDSKGAPDK-K-----------MIQIMYDVFKAVRLDHQTARVTGFALSTAMPV------------SETI 830 (1067)
Q Consensus 775 ~klllia~DiDGTLl~~~~-~-----------i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~------------~~~~ 830 (1067)
+|++++ |+||||....+ . +-+.+.++|+.|+++| + .++|+|..+. ..+.
T Consensus 13 ~k~~~~--D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G----~-~l~I~TN~~~~~~~~~~~~~~~~~i~ 85 (166)
T TIGR01664 13 SKVAAF--DLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDEG----Y-KIVIFTNQSGIGRGKLSAESFKNKIE 85 (166)
T ss_pred CcEEEE--eCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHCC----C-EEEEEeCCcccccCcccHHHHHHHHH
Confidence 466555 99999765322 1 2267899999999987 7 7899985443 2467
Q ss_pred HHHHhcCCCCCCCCEEEEcC
Q 001492 831 EFLNSMKIEANEFDALICSS 850 (1067)
Q Consensus 831 ~~l~~l~i~~~~~d~~I~~n 850 (1067)
.+++.+++. ++.+|+++
T Consensus 86 ~~l~~~gl~---~~~ii~~~ 102 (166)
T TIGR01664 86 AFLEKLKVP---IQVLAATH 102 (166)
T ss_pred HHHHHcCCC---EEEEEecC
Confidence 788998874 34555544
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.015 Score=54.60 Aligned_cols=61 Identities=16% Similarity=0.085 Sum_probs=42.6
Q ss_pred EEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEEC---CCCHHHHHHHHHhcCCCCCCCCEEEE
Q 001492 781 ALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALST---AMPVSETIEFLNSMKIEANEFDALIC 848 (1067)
Q Consensus 781 a~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaT---GR~~~~~~~~l~~l~i~~~~~d~~I~ 848 (1067)
.+|+||||.+. .++.+...++|++|++.| . .|++.| +|+.......|..+|++. .++-+|+
T Consensus 2 l~D~dGvl~~g-~~~ipga~e~l~~L~~~g----~-~~~~lTNns~~s~~~~~~~L~~~Gi~~-~~~~i~t 65 (101)
T PF13344_consen 2 LFDLDGVLYNG-NEPIPGAVEALDALRERG----K-PVVFLTNNSSRSREEYAKKLKKLGIPV-DEDEIIT 65 (101)
T ss_dssp EEESTTTSEET-TEE-TTHHHHHHHHHHTT----S-EEEEEES-SSS-HHHHHHHHHHTTTT---GGGEEE
T ss_pred EEeCccEeEeC-CCcCcCHHHHHHHHHHcC----C-CEEEEeCCCCCCHHHHHHHHHhcCcCC-CcCEEEC
Confidence 45999998775 456678899999999997 4 566665 466678888889989863 2333444
|
... |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.067 Score=70.79 Aligned_cols=41 Identities=10% Similarity=0.045 Sum_probs=37.5
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
.+.+.++++|+++++.| | +++++||.+..++..+.+++||-
T Consensus 656 ~lr~~~~~~I~~l~~ag----i-~v~miTGD~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRAS----I-RTVMITGDNPLTAVHVARECGIV 696 (1054)
T ss_pred CCCccHHHHHHHHHHCC----C-eEEEECCCCHHHHHHHHHHcCCC
Confidence 46688999999999997 8 99999999999999999999883
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.11 Score=64.83 Aligned_cols=40 Identities=8% Similarity=-0.021 Sum_probs=36.7
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i 838 (1067)
.+-+..++++++|++.| + +++++||=+...+..+.+++|+
T Consensus 445 ~~R~~~~eai~~Lr~~G----I-~vvMiTGDn~~TA~aIA~elGI 484 (679)
T PRK01122 445 IVKPGIKERFAELRKMG----I-KTVMITGDNPLTAAAIAAEAGV 484 (679)
T ss_pred cCchhHHHHHHHHHHCC----C-eEEEECCCCHHHHHHHHHHcCC
Confidence 35588999999999998 9 9999999999999999999887
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.12 Score=67.37 Aligned_cols=40 Identities=15% Similarity=0.106 Sum_probs=36.7
Q ss_pred hHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 795 MIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 795 i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
+-+.++++|+.+++.| | ++..+||=...++..+.+++|+.
T Consensus 548 pr~~v~~aI~~l~~AG----I-~v~MiTGD~~~TA~aIa~~~Gi~ 587 (917)
T COG0474 548 PREDVKEAIEELREAG----I-KVWMITGDHVETAIAIAKECGIE 587 (917)
T ss_pred CCccHHHHHHHHHHCC----C-cEEEECCCCHHHHHHHHHHcCCC
Confidence 4488999999999998 9 99999999999999999998874
|
|
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=95.22 E-value=10 Score=45.98 Aligned_cols=92 Identities=16% Similarity=0.107 Sum_probs=55.7
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcE--EEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchh-----hhccCCceEEeC
Q 001492 549 GQVAYPKHHKQYDVPEIYRLAAKTKGV--FINPALVEPFGLTLIEAAAHGLPMVATKNGGPVD-----IHRALNNGLLVD 621 (1067)
Q Consensus 549 ~~V~~~g~~~~~dl~~ly~~A~~~~dV--~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~e-----iv~~~~~Gllv~ 621 (1067)
..+.+.++.|+. +++... ++ ||.- +-..+++||+++|+|+|+-...+-.- +++.-..|+-+.
T Consensus 344 ~g~~v~~w~pq~---~iL~h~----~v~~fvtH----~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~ 412 (491)
T PLN02534 344 RGLLIKGWAPQV---LILSHP----AIGGFLTH----CGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVG 412 (491)
T ss_pred CCeeccCCCCHH---HHhcCC----ccceEEec----CccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEec
Confidence 356777898874 456665 44 5532 33468999999999999976543211 122222333321
Q ss_pred ---------------CCCHHHHHHHHHHhhcC-HHHHHHHHHHHHH
Q 001492 622 ---------------PHDQQAIADALLKLVSE-KNLWVECRKNGWK 651 (1067)
Q Consensus 622 ---------------p~d~~~la~aL~~ll~d-~~~~~~~~~~~~~ 651 (1067)
--+.+++++++.+++.+ .+.-+++++++.+
T Consensus 413 ~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~e 458 (491)
T PLN02534 413 VEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQE 458 (491)
T ss_pred ccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHH
Confidence 02578999999999962 2333455555543
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.051 Score=59.08 Aligned_cols=36 Identities=6% Similarity=-0.002 Sum_probs=30.5
Q ss_pred HHHHHHHHHhcCCCCceeEEEEECCC----CHHHHHHHHHhcCCC
Q 001492 799 MYDVFKAVRLDHQTARVTGFALSTAM----PVSETIEFLNSMKIE 839 (1067)
Q Consensus 799 ~~~al~~l~~~g~~g~i~~~vIaTGR----~~~~~~~~l~~l~i~ 839 (1067)
.+++|+.++++| + .++|+|+| .-..+..+++.+|++
T Consensus 119 a~elL~~l~~~G----~-~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 119 ARQLIDMHQRRG----D-AIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred HHHHHHHHHHCC----C-EEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 778899999997 7 89999999 556788888888885
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.23 Score=55.37 Aligned_cols=41 Identities=22% Similarity=0.227 Sum_probs=36.4
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEE
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLI 1011 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVa 1011 (1067)
.|..++.+++++++++++++++ |||+.+ | +.+-+.+|..++
T Consensus 196 ~k~~~~~~~l~~~~~~p~~~l~-IGDs~~-D-i~aA~~AG~~~I 236 (273)
T PRK13225 196 SKRRALSQLVAREGWQPAAVMY-VGDETR-D-VEAARQVGLIAV 236 (273)
T ss_pred CCHHHHHHHHHHhCcChhHEEE-ECCCHH-H-HHHHHHCCCeEE
Confidence 4778999999999999999999 999999 9 999988886554
|
|
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=95.11 E-value=2 Score=50.08 Aligned_cols=110 Identities=10% Similarity=0.167 Sum_probs=65.0
Q ss_pred CCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEc--CC-------CCchhhhccCCc
Q 001492 546 DLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVAT--KN-------GGPVDIHRALNN 616 (1067)
Q Consensus 546 ~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat--~~-------Gg~~eiv~~~~~ 616 (1067)
...++|.+... ..++.+++..| |++|- -+.-++.|++.+++|||-. +. |...++ .+...
T Consensus 249 ~~~~~i~~~~~--~~~~~~ll~~a----DiLIT-----DySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~-~~~~p 316 (369)
T PF04464_consen 249 EDNSNIIFVSD--NEDIYDLLAAA----DILIT-----DYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDY-EEDLP 316 (369)
T ss_dssp T-TTTEEE-TT---S-HHHHHHT-----SEEEE-----SS-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-T-TTSSS
T ss_pred ccCCcEEECCC--CCCHHHHHHhc----CEEEE-----echhHHHHHHHhCCCEEEEeccHHHHhhccCCCCch-HhhCC
Confidence 34567777655 34899999999 99773 4677999999999999964 22 333332 23345
Q ss_pred eEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 001492 617 GLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRV 669 (1067)
Q Consensus 617 Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~ 669 (1067)
|-++ .+.++|.++|..+++++...++.++...+..-.|.=...|++..+.+
T Consensus 317 g~~~--~~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Dg~s~eri~~~I 367 (369)
T PF04464_consen 317 GPIV--YNFEELIEAIENIIENPDEYKEKREKFRDKFFKYNDGNSSERIVNYI 367 (369)
T ss_dssp S-EE--SSHHHHHHHHTTHHHHHHHTHHHHHHHHHHHSTT--S-HHHHHHHHH
T ss_pred Ccee--CCHHHHHHHHHhhhhCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHH
Confidence 6666 48999999999999877665554444444442343345566555544
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.11 Score=65.02 Aligned_cols=148 Identities=15% Similarity=0.135 Sum_probs=107.1
Q ss_pred cCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCCc-----EEEEEecCCChhhhhccchHHHHHHHHHHHhc----
Q 001492 476 TNPHKPMILALSRPDPKKNITT-LLKAFGECRPLRELAN-----LTLIMGNRDDIEEMSSGNASVLITVLKLIDKY---- 545 (1067)
Q Consensus 476 ~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~l~~~~~-----l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~---- 545 (1067)
.+|+..+++++-|+...|...+ ++..+..+.++...|+ .++|.|+...... ......+..|+.+.+..
T Consensus 526 ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y--~~aK~iIklI~~va~~in~Dp 603 (797)
T cd04300 526 VDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGY--YMAKLIIKLINAVADVVNNDP 603 (797)
T ss_pred cCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCc--HHHHHHHHHHHHHHHHhccCh
Confidence 5788899999999999998777 6666555544444443 5566665422111 11245666777776642
Q ss_pred CCCC--cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCCEEEcCCCCchhhhcc--CCceEE
Q 001492 546 DLYG--QVAYPKHHKQYDVPEIYRLAAKTKGVFINPAL--VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRA--LNNGLL 619 (1067)
Q Consensus 546 ~l~~--~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~--~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~--~~~Gll 619 (1067)
.+.+ +|.|+.-..-+--..++.+| ||-.+.|. .|..|..=+=+|.-|.+.|+|..|+..|+.+. ..|+++
T Consensus 604 ~v~~~lkVVFlenY~VslAe~iipaa----Dvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fi 679 (797)
T cd04300 604 DVGDKLKVVFLPNYNVSLAEKIIPAA----DLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFI 679 (797)
T ss_pred hcCCceEEEEeCCCChHHHHHhhhhh----hhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEE
Confidence 2344 78888776655566677777 99999887 69999999999999999999999999999887 789999
Q ss_pred eCCCCHHHHHH
Q 001492 620 VDPHDQQAIAD 630 (1067)
Q Consensus 620 v~p~d~~~la~ 630 (1067)
|- .+.+++.+
T Consensus 680 FG-~~~~ev~~ 689 (797)
T cd04300 680 FG-LTAEEVEA 689 (797)
T ss_pred eC-CCHHHHHH
Confidence 95 35666544
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.022 Score=59.92 Aligned_cols=47 Identities=13% Similarity=0.177 Sum_probs=43.2
Q ss_pred CCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCc
Q 001492 967 ASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVV 1016 (1067)
Q Consensus 967 asKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~ 1016 (1067)
-+|+.+++.+++++|++++++++ +||+.+ | ++|++.+|.++|+....
T Consensus 146 ~~k~~~~~~~~~~~~~~~~~~i~-iGDs~~-D-~~~a~~ag~~~a~~~~~ 192 (201)
T TIGR01491 146 DNKGEAVERLKRELNPSLTETVA-VGDSKN-D-LPMFEVADISISLGDEG 192 (201)
T ss_pred ccHHHHHHHHHHHhCCCHHHEEE-EcCCHh-H-HHHHHhcCCeEEECCCc
Confidence 46899999999999999999999 999999 9 99999999999997644
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.18 Score=54.33 Aligned_cols=44 Identities=9% Similarity=-0.010 Sum_probs=38.5
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCC
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKG 1014 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgN 1014 (1067)
.+...++.+++++|++++++++ |||+.+ | +++-+.+|..++.-+
T Consensus 149 p~~~~~~~~~~~~~~~~~~~~~-igDs~~-D-i~aA~~aG~~~i~v~ 192 (222)
T PRK10826 149 PHPEVYLNCAAKLGVDPLTCVA-LEDSFN-G-MIAAKAARMRSIVVP 192 (222)
T ss_pred CCHHHHHHHHHHcCCCHHHeEE-EcCChh-h-HHHHHHcCCEEEEec
Confidence 4567999999999999999999 999999 9 999999997665544
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.15 Score=63.62 Aligned_cols=40 Identities=8% Similarity=0.056 Sum_probs=36.8
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i 838 (1067)
.+-+..++++++|++.| + .+++.||-+...+..+.+++|+
T Consensus 441 p~R~~a~e~I~~Lr~~G----I-~vvMiTGDn~~TA~aIA~elGI 480 (673)
T PRK14010 441 VIKDGLVERFRELREMG----I-ETVMCTGDNELTAATIAKEAGV 480 (673)
T ss_pred CCcHHHHHHHHHHHHCC----C-eEEEECCCCHHHHHHHHHHcCC
Confidence 35589999999999998 9 9999999999999999999887
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=94.24 E-value=0.047 Score=58.51 Aligned_cols=43 Identities=16% Similarity=0.288 Sum_probs=40.8
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeC
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMK 1013 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMg 1013 (1067)
.|...++.++++++++++++++ |||+.+ | ++|++.+|.+|+|+
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~-iGDs~~-D-i~aa~~ag~~i~~~ 194 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVA-VGDGAN-D-LSMIKAAGLGIAFN 194 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEE-EECCHH-H-HHHHHhCCCeEEeC
Confidence 4899999999999999999999 999999 9 99999999999994
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=94.23 E-value=0.23 Score=61.27 Aligned_cols=99 Identities=14% Similarity=0.225 Sum_probs=63.8
Q ss_pred hHHHHHHHHHHHhcCCcEEEEEeeCC-------------eeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCC
Q 001492 932 ARRIDDLRQKLRMRGLRCHPMYCRNS-------------TRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTD 998 (1067)
Q Consensus 932 ~~~~~el~~~L~~~~~~~~v~~s~~~-------------~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D 998 (1067)
.+.+.+.-+.|+..+..+.++...+. .+-++.| -.|...++.+.. +.++++. +||+.| |
T Consensus 407 ~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~~~~~~~p--~~K~~~v~~l~~----~~~~v~~-VGDg~n-D 478 (562)
T TIGR01511 407 RPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGINVRAEVLP--DDKAALIKELQE----KGRVVAM-VGDGIN-D 478 (562)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcEEccCCh--HHHHHHHHHHHH----cCCEEEE-EeCCCc-c
Confidence 34456667777777766654433211 1223334 268888877765 3456766 999999 9
Q ss_pred hhhhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHH
Q 001492 999 YEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANAL 1057 (1067)
Q Consensus 999 ~~eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al 1057 (1067)
.+|++.++.||+||++. +..+..|+ ++-.+.+-++|..++
T Consensus 479 -~~al~~A~vgia~g~g~---~~a~~~Ad---------------vvl~~~~l~~l~~~i 518 (562)
T TIGR01511 479 -APALAQADVGIAIGAGT---DVAIEAAD---------------VVLMRNDLNDVATAI 518 (562)
T ss_pred -HHHHhhCCEEEEeCCcC---HHHHhhCC---------------EEEeCCCHHHHHHHH
Confidence 99999999999999876 33444554 444334556666655
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.12 Score=55.52 Aligned_cols=40 Identities=8% Similarity=-0.029 Sum_probs=33.4
Q ss_pred hHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHH---HHHHHHhcCCC
Q 001492 795 MIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSE---TIEFLNSMKIE 839 (1067)
Q Consensus 795 i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~---~~~~l~~l~i~ 839 (1067)
..+.++++++.++++| + .|+++|||+... +.+.|...|++
T Consensus 121 aip~al~l~~~l~~~G----~-~Vf~lTGR~e~~r~~T~~nL~~~G~~ 163 (229)
T TIGR01675 121 ALPEGLKLYQKIIELG----I-KIFLLSGRWEELRNATLDNLINAGFT 163 (229)
T ss_pred CCHHHHHHHHHHHHCC----C-EEEEEcCCChHHHHHHHHHHHHcCCC
Confidence 3467888999999997 7 899999999766 77888888874
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.074 Score=58.17 Aligned_cols=65 Identities=15% Similarity=0.100 Sum_probs=46.3
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHH--HHHHHHHhcCCCCCCCCEEEEc
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVS--ETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~--~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
.+.+|+|||+.+. ..+.+.+.++|++|+++| + .++|+|..+.. .+.+.++.+|++...|+.++++
T Consensus 10 ~~~~D~dG~l~~~-~~~~pga~e~L~~L~~~G----~-~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s 76 (242)
T TIGR01459 10 VFLLDLWGVIIDG-NHTYPGAVQNLNKIIAQG----K-PVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISS 76 (242)
T ss_pred EEEEecccccccC-CccCccHHHHHHHHHHCC----C-EEEEEeCCCCChHHHHHHHHHCCCCccccceEEcc
Confidence 3444999997765 356789999999999997 6 78886654443 4447889999862146666664
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.19 Score=61.93 Aligned_cols=101 Identities=12% Similarity=0.162 Sum_probs=67.1
Q ss_pred chHHHHHHHHHHHhcC-CcEEEEEeeCC--------------eeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCC
Q 001492 931 KARRIDDLRQKLRMRG-LRCHPMYCRNS--------------TRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESG 995 (1067)
Q Consensus 931 ~~~~~~el~~~L~~~~-~~~~v~~s~~~--------------~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~ 995 (1067)
..+.+.++-+.|+..+ .++.++...+. .+-++.| -.|...++.+.. ..+++++ +||+.
T Consensus 385 ~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~p--~~K~~~v~~l~~----~~~~v~~-vGDg~ 457 (556)
T TIGR01525 385 LRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELLP--EDKLAIVKELQE----EGGVVAM-VGDGI 457 (556)
T ss_pred chHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCCH--HHHHHHHHHHHH----cCCEEEE-EECCh
Confidence 3445667777787777 66655444321 1223333 257777777654 3456766 99999
Q ss_pred CCChhhhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHH
Q 001492 996 DTDYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALR 1058 (1067)
Q Consensus 996 N~D~~eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~ 1058 (1067)
| | .+|++.+|.||+||++. +..+..|+ ++-.+.+-++|..+++
T Consensus 458 n-D-~~al~~A~vgia~g~~~---~~~~~~Ad---------------~vi~~~~~~~l~~~i~ 500 (556)
T TIGR01525 458 N-D-APALAAADVGIAMGAGS---DVAIEAAD---------------IVLLNDDLSSLPTAID 500 (556)
T ss_pred h-H-HHHHhhCCEeEEeCCCC---HHHHHhCC---------------EEEeCCCHHHHHHHHH
Confidence 9 9 99999999999999766 33444555 5655666778777763
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.1 Score=64.96 Aligned_cols=147 Identities=15% Similarity=0.168 Sum_probs=106.9
Q ss_pred ccCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCCc-----EEEEEecC--CChhhhhccchHHHHHHHHHHHhcC
Q 001492 475 LTNPHKPMILALSRPDPKKNITT-LLKAFGECRPLRELAN-----LTLIMGNR--DDIEEMSSGNASVLITVLKLIDKYD 546 (1067)
Q Consensus 475 ~~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~l~~~~~-----l~lIvG~~--~~~~~l~~~~~~~~~~i~~l~~~~~ 546 (1067)
..+|+..+++++-|+...|...+ ++.....+.++...|+ .++|.|+. |.+.. ....+..|+..++..+
T Consensus 524 ~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~----aK~iIklI~~va~~in 599 (798)
T PRK14985 524 EINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYL----AKNIIFAINKVAEVIN 599 (798)
T ss_pred ccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHH----HHHHHHHHHHHHHHhc
Confidence 35678888999999999998777 7666665554455543 55655554 33222 2446666777765542
Q ss_pred ----CCC--cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCCEEEcCCCCchhhhcc--CCc
Q 001492 547 ----LYG--QVAYPKHHKQYDVPEIYRLAAKTKGVFINPAL--VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRA--LNN 616 (1067)
Q Consensus 547 ----l~~--~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~--~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~--~~~ 616 (1067)
..+ +|.|+.-..-+--..++.+| ||-.+.|. .|..|..=+=+|.-|.+.++|-.|...|+.+. +.|
T Consensus 600 ~Dp~v~~~lkVVFlenY~VslAe~lipaa----Dvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN 675 (798)
T PRK14985 600 NDPLVGDKLKVVFLPDYCVSAAELLIPAA----DISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEEN 675 (798)
T ss_pred CChhhCCceeEEEeCCCChHHHHHHhhhh----hhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCc
Confidence 233 78888877655566677777 99999887 69999999999999999999999999999876 789
Q ss_pred eEEeCCCCHHHHHH
Q 001492 617 GLLVDPHDQQAIAD 630 (1067)
Q Consensus 617 Gllv~p~d~~~la~ 630 (1067)
|+++-. +.+++.+
T Consensus 676 ~f~fG~-~~~ev~~ 688 (798)
T PRK14985 676 IFIFGH-TVEQVKA 688 (798)
T ss_pred EEEeCC-CHHHHHH
Confidence 999964 5665544
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=93.97 E-value=0.046 Score=57.77 Aligned_cols=49 Identities=16% Similarity=0.189 Sum_probs=44.2
Q ss_pred ecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCC
Q 001492 963 VPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKG 1014 (1067)
Q Consensus 963 ~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgN 1014 (1067)
.+.+-.|..+++.++++.+++++++++ +||+.+ | ++|++.+|.++++..
T Consensus 150 ~~~g~~K~~~l~~~~~~~~~~~~~~~~-~gDs~~-D-~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 150 NCKGEGKVHALAELLAEEQIDLKDSYA-YGDSIS-D-LPLLSLVGHPYVVNP 198 (202)
T ss_pred CCCChHHHHHHHHHHHHcCCCHHHcEe-eeCCcc-c-HHHHHhCCCcEEeCC
Confidence 345678999999999999999999999 999999 9 999999999998764
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.14 Score=64.01 Aligned_cols=148 Identities=13% Similarity=0.113 Sum_probs=107.2
Q ss_pred ccCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCCc-----EEEEEecC--CChhhhhccchHHHHHHHHHHHhc-
Q 001492 475 LTNPHKPMILALSRPDPKKNITT-LLKAFGECRPLRELAN-----LTLIMGNR--DDIEEMSSGNASVLITVLKLIDKY- 545 (1067)
Q Consensus 475 ~~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~l~~~~~-----l~lIvG~~--~~~~~l~~~~~~~~~~i~~l~~~~- 545 (1067)
..+|+...++++-|+...|...+ ++..+..+.++...|+ .++|.|+. |.+.. ....+..|+..++..
T Consensus 522 ~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~----aK~iIklI~~va~~iN 597 (794)
T TIGR02093 522 EVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHM----AKLIIKLINSVAEVVN 597 (794)
T ss_pred ccCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHH----HHHHHHHHHHHHHHhc
Confidence 45678888999999999998777 6666665554454432 35555554 22222 244666677666442
Q ss_pred ---CCCC--cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCCEEEcCCCCchhhhcc--CCc
Q 001492 546 ---DLYG--QVAYPKHHKQYDVPEIYRLAAKTKGVFINPAL--VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRA--LNN 616 (1067)
Q Consensus 546 ---~l~~--~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~--~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~--~~~ 616 (1067)
...+ +|.|+....-+--..++.+| ||-.+.|. .|..|..=+=+|.-|.+.|+|..|+..|+.++ ..|
T Consensus 598 ~Dp~v~~~lkVVFlenY~VslAe~iipaa----Dvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN 673 (794)
T TIGR02093 598 NDPAVGDKLKVVFVPNYNVSLAELIIPAA----DLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAEN 673 (794)
T ss_pred cChhhCCceeEEEeCCCChHHHHHhhhhh----hhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCccc
Confidence 2334 78888877666566677777 99999887 69999999999999999999999999999877 789
Q ss_pred eEEeCCCCHHHHHHH
Q 001492 617 GLLVDPHDQQAIADA 631 (1067)
Q Consensus 617 Gllv~p~d~~~la~a 631 (1067)
+++|- .+.+++.+-
T Consensus 674 ~fiFG-~~~~ev~~~ 687 (794)
T TIGR02093 674 IFIFG-LTVEEVEAL 687 (794)
T ss_pred EEEcC-CCHHHHHHH
Confidence 99995 466666544
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=93.81 E-value=0.05 Score=55.72 Aligned_cols=90 Identities=20% Similarity=0.206 Sum_probs=59.5
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC--------chhhhccCCceEEe
Q 001492 549 GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG--------PVDIHRALNNGLLV 620 (1067)
Q Consensus 549 ~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg--------~~eiv~~~~~Gllv 620 (1067)
.+|.+.++. +++.++|+.| |++|.- +-+.|+.|++++|+|+|.-...+ ....+.....|+.+
T Consensus 55 ~~v~~~~~~--~~m~~~m~~a----DlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~ 124 (167)
T PF04101_consen 55 PNVKVFGFV--DNMAELMAAA----DLVISH----AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIML 124 (167)
T ss_dssp CCCEEECSS--SSHHHHHHHH----SEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCS
T ss_pred CcEEEEech--hhHHHHHHHc----CEEEeC----CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCcccc
Confidence 578888884 5799999999 988853 34589999999999988765544 12223333344444
Q ss_pred CCC--CHHHHHHHHHHhhcCHHHHHHHHHH
Q 001492 621 DPH--DQQAIADALLKLVSEKNLWVECRKN 648 (1067)
Q Consensus 621 ~p~--d~~~la~aL~~ll~d~~~~~~~~~~ 648 (1067)
... +++.|.++|.+++.++.....+.++
T Consensus 125 ~~~~~~~~~L~~~i~~l~~~~~~~~~~~~~ 154 (167)
T PF04101_consen 125 DESELNPEELAEAIEELLSDPEKLKEMAKA 154 (167)
T ss_dssp ECCC-SCCCHHHHHHCHCCCHH-SHHHCCC
T ss_pred CcccCCHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 322 3678999999999999876665444
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=93.70 E-value=0.36 Score=59.71 Aligned_cols=147 Identities=13% Similarity=0.183 Sum_probs=88.7
Q ss_pred cCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCCCh-hhhhccchHHHHHHHHHHHhc---
Q 001492 476 TNPHKPMILALSRPDPKKNITT-LLKAFGECRPLRELA-----NLTLIMGNRDDI-EEMSSGNASVLITVLKLIDKY--- 545 (1067)
Q Consensus 476 ~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~l~~~~-----~l~lIvG~~~~~-~~l~~~~~~~~~~i~~l~~~~--- 545 (1067)
.+|+..+++++-|+...|...+ ++..+..+.++...| .+++|+|+.... +.+ ..+++..|+.+++..
T Consensus 440 ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~~---gK~iIk~I~~va~~in~D 516 (713)
T PF00343_consen 440 LDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDYM---GKEIIKLINNVAEVINND 516 (713)
T ss_dssp --TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-HH---HHHHHHHHHHHHHHHCT-
T ss_pred CCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcHH---HHHHHHHHHHHHHHHhcC
Confidence 5678888999999999998776 344333332222222 245555544221 111 234566666665532
Q ss_pred -CCCC--cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCCEEEcCCCCchhhhcc--CCceE
Q 001492 546 -DLYG--QVAYPKHHKQYDVPEIYRLAAKTKGVFINPAL--VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRA--LNNGL 618 (1067)
Q Consensus 546 -~l~~--~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~--~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~--~~~Gl 618 (1067)
.+.+ +|.|+.-.+-+--..++.+| ||-++.|. .|..|..-+=+|.-|.+.++|..|...|+.+. .+|.+
T Consensus 517 p~v~~~lkVvFlenYdvslA~~lipg~----DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~f 592 (713)
T PF00343_consen 517 PEVGDRLKVVFLENYDVSLAEKLIPGV----DVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIF 592 (713)
T ss_dssp TTTCCGEEEEEETT-SHHHHHHHGGG-----SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSE
T ss_pred hhhccceeEEeecCCcHHHHHHHhhhh----hhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEE
Confidence 2333 68887776554455566677 99999987 69999999999999999999999999999764 35788
Q ss_pred EeCCCCHHHHHH
Q 001492 619 LVDPHDQQAIAD 630 (1067)
Q Consensus 619 lv~p~d~~~la~ 630 (1067)
++- .+.+++.+
T Consensus 593 iFG-~~~~ev~~ 603 (713)
T PF00343_consen 593 IFG-LTAEEVEE 603 (713)
T ss_dssp EES--BHHHHHH
T ss_pred EcC-CCHHHHHH
Confidence 885 45666543
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes | Back alignment and domain information |
|---|
Probab=93.56 E-value=0.2 Score=50.58 Aligned_cols=77 Identities=17% Similarity=0.063 Sum_probs=44.6
Q ss_pred CceEEEEcCC-chhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeC
Q 001492 305 WPYVIHGHYA-DAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITS 383 (1067)
Q Consensus 305 ~pDvIh~h~~-~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~ 383 (1067)
.+|+|.+... +.+....+....-++|.++.+|.---.+ .......-+..|.+..- ...-.||.|+..
T Consensus 59 ~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl~Y-------P~~~~~~rd~~~~~~ni-----~saLaAD~v~FN 126 (168)
T PF12038_consen 59 SYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQLAY-------PVSPGQERDFQYGMNNI-----YSALAADRVVFN 126 (168)
T ss_pred CCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCcccC-------CCCCCccccccHHHHHH-----HHHHhceeeeec
Confidence 4799999875 4444444444556799999999741111 11011111223333322 245689999999
Q ss_pred CHHHHHHHHh
Q 001492 384 TKQEIDEQWG 393 (1067)
Q Consensus 384 S~~~~~~~~~ 393 (1067)
|....+.+..
T Consensus 127 S~~nr~sFL~ 136 (168)
T PF12038_consen 127 SAFNRDSFLD 136 (168)
T ss_pred chhhHHHHHH
Confidence 9876665543
|
It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=93.54 E-value=0.22 Score=50.33 Aligned_cols=62 Identities=11% Similarity=0.127 Sum_probs=45.4
Q ss_pred EEEeCCCCCCCCc-----------hhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHH---HHHHHhc-----CCCC
Q 001492 780 IALDCYDSKGAPD-----------KKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSET---IEFLNSM-----KIEA 840 (1067)
Q Consensus 780 ia~DiDGTLl~~~-----------~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~---~~~l~~l-----~i~~ 840 (1067)
+.+|+|||+..++ ....+...++...++++| . +|+..|+|+.... +.||... ++|
T Consensus 2 VvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~G----Y-~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP- 75 (157)
T PF08235_consen 2 VVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADNG----Y-KILYLTARPIGQANRTRSWLAQHQQQGHNLP- 75 (157)
T ss_pred EEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHCC----e-EEEEECcCcHHHHHHHHHHHHHHHhCCccCC-
Confidence 4569999966542 145678889999999997 6 8999999997654 5788876 554
Q ss_pred CCCCEEEEc
Q 001492 841 NEFDALICS 849 (1067)
Q Consensus 841 ~~~d~~I~~ 849 (1067)
++.++++
T Consensus 76 --~Gpv~~s 82 (157)
T PF08235_consen 76 --DGPVLLS 82 (157)
T ss_pred --CCCEEEC
Confidence 3445554
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=93.44 E-value=0.28 Score=53.35 Aligned_cols=37 Identities=5% Similarity=0.006 Sum_probs=28.7
Q ss_pred HHHHHHHHHHhcCCCCceeEEEEECCCC----HHHHHHHHHhcCCC
Q 001492 798 IMYDVFKAVRLDHQTARVTGFALSTAMP----VSETIEFLNSMKIE 839 (1067)
Q Consensus 798 ~~~~al~~l~~~g~~g~i~~~vIaTGR~----~~~~~~~l~~l~i~ 839 (1067)
..+++|+.++++| + .++++|||+ ...+..+++.++++
T Consensus 118 Ga~elL~~L~~~G----~-~I~iVTnR~~~k~~~t~~~Llk~~gip 158 (237)
T PRK11009 118 VARQLIDMHVKRG----D-SIYFITGRTATKTETVSKTLADDFHIP 158 (237)
T ss_pred HHHHHHHHHHHCC----C-eEEEEeCCCCcccHHHHHHHHHHcCCC
Confidence 3789999999987 7 899999996 33555666668884
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=93.33 E-value=0.31 Score=59.89 Aligned_cols=84 Identities=10% Similarity=0.161 Sum_probs=57.0
Q ss_pred hHHHHHHHHHHHhcCC-cEEEEEeeCC--------------eeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCC
Q 001492 932 ARRIDDLRQKLRMRGL-RCHPMYCRNS--------------TRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGD 996 (1067)
Q Consensus 932 ~~~~~el~~~L~~~~~-~~~v~~s~~~--------------~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N 996 (1067)
.+.+.+.-+.|+..+. ++.++...+. .+-++.|. .|...++.+... .++++. +||+.|
T Consensus 364 ~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~p~--~K~~~i~~l~~~----~~~v~~-vGDg~n 436 (536)
T TIGR01512 364 RPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELLPE--DKLEIVKELREK----YGPVAM-VGDGIN 436 (536)
T ss_pred hHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccCcH--HHHHHHHHHHhc----CCEEEE-EeCCHH
Confidence 4456677777877777 6666544321 12344443 687777776543 356766 999999
Q ss_pred CChhhhhcCCceEEEeC-CCcccchhhhhccc
Q 001492 997 TDYEELISGAHKTLIMK-GVVEKGSEELLRTT 1027 (1067)
Q Consensus 997 ~D~~eML~~ag~gVaMg-NA~e~~~~~~~~a~ 1027 (1067)
| .+|++.++.||+|| ++. +..+..++
T Consensus 437 -D-~~al~~A~vgia~g~~~~---~~~~~~ad 463 (536)
T TIGR01512 437 -D-APALAAADVGIAMGASGS---DVAIETAD 463 (536)
T ss_pred -H-HHHHHhCCEEEEeCCCcc---HHHHHhCC
Confidence 9 99999999999999 554 44445555
|
. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=93.20 E-value=0.053 Score=55.86 Aligned_cols=42 Identities=17% Similarity=0.322 Sum_probs=37.8
Q ss_pred EecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCC
Q 001492 962 IVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGA 1006 (1067)
Q Consensus 962 I~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~a 1006 (1067)
..+.+.+|+.+++.+++.+|++++++++ |||+.| | ++|++.|
T Consensus 136 ~~~~~~~K~~~l~~~~~~~~~~~~~~~~-iGDs~~-D-~~~~~~a 177 (177)
T TIGR01488 136 VNPEGECKGKVLKELLEESKITLKKIIA-VGDSVN-D-LPMLKLA 177 (177)
T ss_pred ccCCcchHHHHHHHHHHHhCCCHHHEEE-EeCCHH-H-HHHHhcC
Confidence 3567889999999999999999999999 999999 9 9999864
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=92.66 E-value=0.22 Score=53.38 Aligned_cols=43 Identities=7% Similarity=0.067 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCC-CCChhhhhcCCceE-EEeCC
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESG-DTDYEELISGAHKT-LIMKG 1014 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~~e~vva~fGDs~-N~D~~eML~~ag~g-VaMgN 1014 (1067)
+....+.+++++|++++++++ |||+. + | +..=+.+|.. |.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~-igDs~~~-d-i~~A~~aG~~~i~~~~ 196 (221)
T TIGR02253 152 HPKIFYAALKRLGVKPEEAVM-VGDRLDK-D-IKGAKNLGMKTVWINQ 196 (221)
T ss_pred CHHHHHHHHHHcCCChhhEEE-ECCChHH-H-HHHHHHCCCEEEEECC
Confidence 456899999999999999999 99997 8 9 9888888864 44443
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=92.54 E-value=0.34 Score=53.54 Aligned_cols=48 Identities=10% Similarity=0.072 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHH---HHHHHHHhcCCCCCCCCEEEEc
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVS---ETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~---~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
+.+.++|+.++++| + .++|+|+|+.. .+...|+.+|++...++.++..
T Consensus 121 pGA~e~L~~L~~~G----~-~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr 171 (266)
T TIGR01533 121 AGALDFLNYANSKG----V-KIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLK 171 (266)
T ss_pred ccHHHHHHHHHHCC----C-eEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeC
Confidence 56688999999987 7 79999999843 4558888888864234555554
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=92.53 E-value=0.16 Score=57.31 Aligned_cols=56 Identities=5% Similarity=0.027 Sum_probs=45.2
Q ss_pred EEEEeCCCCCCCC------------chhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 779 VIALDCYDSKGAP------------DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 779 lia~DiDGTLl~~------------~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
++.+|+|||+... +..+.+.+.++|+.|+++| + .++|+|||+.......++.+++.
T Consensus 160 ~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g----~-~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 160 AVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAAG----Y-EIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred EEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhCC----C-EEEEEeCCChhhHHHHHHHHHHc
Confidence 3444999996642 2356789999999999987 7 89999999999999888887763
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=92.48 E-value=0.34 Score=61.71 Aligned_cols=80 Identities=15% Similarity=0.185 Sum_probs=54.2
Q ss_pred HHHHHHHHHHhcCCcEEEEEeeCC--------------eeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCh
Q 001492 934 RIDDLRQKLRMRGLRCHPMYCRNS--------------TRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDY 999 (1067)
Q Consensus 934 ~~~el~~~L~~~~~~~~v~~s~~~--------------~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~ 999 (1067)
...+..+.|+..+.++.+ .++++ .+.++.|. .|...++.|.+. .+++. +||+-| |
T Consensus 572 ~a~~~i~~L~~~gi~~~l-lTGd~~~~a~~ia~~lgi~~~~~~~p~--~K~~~v~~l~~~-----~~v~m-vGDgiN-D- 640 (741)
T PRK11033 572 DARQAISELKALGIKGVM-LTGDNPRAAAAIAGELGIDFRAGLLPE--DKVKAVTELNQH-----APLAM-VGDGIN-D- 640 (741)
T ss_pred hHHHHHHHHHHCCCEEEE-EcCCCHHHHHHHHHHcCCCeecCCCHH--HHHHHHHHHhcC-----CCEEE-EECCHH-h-
Confidence 455666667666665543 33322 13345554 699999887642 34555 999999 9
Q ss_pred hhhhcCCceEEEeCCCcccchhhhhccc
Q 001492 1000 EELISGAHKTLIMKGVVEKGSEELLRTT 1027 (1067)
Q Consensus 1000 ~eML~~ag~gVaMgNA~e~~~~~~~~a~ 1027 (1067)
.++|+.++.||+||++. +..+..|+
T Consensus 641 apAl~~A~vgia~g~~~---~~a~~~ad 665 (741)
T PRK11033 641 APAMKAASIGIAMGSGT---DVALETAD 665 (741)
T ss_pred HHHHHhCCeeEEecCCC---HHHHHhCC
Confidence 99999999999999987 33444454
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.40 E-value=0.82 Score=55.15 Aligned_cols=41 Identities=22% Similarity=0.394 Sum_probs=33.3
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEE-EeCC
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTL-IMKG 1014 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gV-aMgN 1014 (1067)
-|++-++-|.++-|-- +.| +||+|| | .+|++.|+.|| +.|+
T Consensus 768 QKA~v~~llq~~t~kr---vc~-IGDGGN-D-VsMIq~A~~GiGI~gk 809 (1051)
T KOG0210|consen 768 QKAQVVRLLQKKTGKR---VCA-IGDGGN-D-VSMIQAADVGIGIVGK 809 (1051)
T ss_pred HHHHHHHHHHHhhCce---EEE-EcCCCc-c-chheeecccceeeecc
Confidence 6999999999988733 656 999999 9 99999987776 3444
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=92.38 E-value=0.21 Score=50.16 Aligned_cols=54 Identities=11% Similarity=0.094 Sum_probs=39.5
Q ss_pred EEEeCCCCCCCCch----------hhHHHHHHHHHHHHhcCCCCceeEEEEECCCC---------------HHHHHHHHH
Q 001492 780 IALDCYDSKGAPDK----------KMIQIMYDVFKAVRLDHQTARVTGFALSTAMP---------------VSETIEFLN 834 (1067)
Q Consensus 780 ia~DiDGTLl~~~~----------~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~---------------~~~~~~~l~ 834 (1067)
+++|+||||.+... ++-+.+.++|+.|+++| + .++|+|..+ ...+...++
T Consensus 3 ~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~g----~-~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~ 77 (147)
T TIGR01656 3 LFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAAG----Y-TVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLR 77 (147)
T ss_pred EEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHCC----C-EEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHH
Confidence 44599999766432 24577889999999997 7 789999765 245666777
Q ss_pred hcCC
Q 001492 835 SMKI 838 (1067)
Q Consensus 835 ~l~i 838 (1067)
.+++
T Consensus 78 ~~~l 81 (147)
T TIGR01656 78 QLGV 81 (147)
T ss_pred hCCC
Confidence 7666
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.38 E-value=2.6 Score=52.42 Aligned_cols=37 Identities=11% Similarity=0.067 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCC
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i 838 (1067)
++++++++.+++.| | .|...||-+..++..+.+++|+
T Consensus 587 ~ev~~ai~~c~~aG----I-rV~mITGD~~~TA~AI~r~iGi 623 (972)
T KOG0202|consen 587 PEVADAIELCRQAG----I-RVIMITGDNKETAEAIAREIGI 623 (972)
T ss_pred hhHHHHHHHHHHcC----C-EEEEEcCCCHHHHHHHHHHhCC
Confidence 78899999999998 9 9999999999999999999876
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=92.24 E-value=0.64 Score=53.98 Aligned_cols=41 Identities=15% Similarity=0.143 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEe
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIM 1012 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaM 1012 (1067)
+...+.+.++++|++++++++ |||+.+ | ++.=+.+|..++.
T Consensus 274 ~Peifl~A~~~lgl~Peecl~-IGDS~~-D-IeAAk~AGm~~Ig 314 (381)
T PLN02575 274 DPEMFIYAAQLLNFIPERCIV-FGNSNQ-T-VEAAHDARMKCVA 314 (381)
T ss_pred CHHHHHHHHHHcCCCcccEEE-EcCCHH-H-HHHHHHcCCEEEE
Confidence 567889999999999999999 999999 9 9999988865443
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.18 E-value=0.14 Score=50.95 Aligned_cols=60 Identities=10% Similarity=-0.004 Sum_probs=43.7
Q ss_pred CeEEEEEEeCCCCCCC------Cch----hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 775 RRLIVIALDCYDSKGA------PDK----KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 775 ~klllia~DiDGTLl~------~~~----~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
+++-++.+|+||||.+ ++. .+.-.-=-.|+.+.+.| + .+.|.|||.-..+..-+++|||+
T Consensus 6 ~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~Gik~l~~~G----i-~vAIITGr~s~ive~Ra~~LGI~ 75 (170)
T COG1778 6 KNIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHGIKLLLKSG----I-KVAIITGRDSPIVEKRAKDLGIK 75 (170)
T ss_pred hhceEEEEeccceeecCeEEEcCCCceeeeeeccCcHHHHHHHHcC----C-eEEEEeCCCCHHHHHHHHHcCCc
Confidence 3555666699999765 111 12222224678888887 8 99999999999999999999995
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=92.15 E-value=0.37 Score=58.56 Aligned_cols=92 Identities=18% Similarity=0.194 Sum_probs=56.9
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC----chhhhccCCceEEeCCC-
Q 001492 549 GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRALNNGLLVDPH- 623 (1067)
Q Consensus 549 ~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg----~~eiv~~~~~Gllv~p~- 623 (1067)
+++....++|+.+ +++.. ..++||.= |--.++.||+.+|+|+|+-..-| ....+.+...|+.++..
T Consensus 323 ~n~~~~~W~PQ~~---lL~hp--~v~~fitH----gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~ 393 (500)
T PF00201_consen 323 KNVLIVKWLPQND---LLAHP--RVKLFITH----GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKND 393 (500)
T ss_dssp TTEEEESS--HHH---HHTST--TEEEEEES------HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC
T ss_pred ceEEEeccccchh---hhhcc--cceeeeec----cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecC
Confidence 4788889998754 45443 11455522 33468999999999999976532 23344455668888644
Q ss_pred -CHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 001492 624 -DQQAIADALLKLVSEKNLWVECRKNGWKNI 653 (1067)
Q Consensus 624 -d~~~la~aL~~ll~d~~~~~~~~~~~~~~~ 653 (1067)
+.+++.++|.++++|+.. ++++.+..
T Consensus 394 ~~~~~l~~ai~~vl~~~~y----~~~a~~ls 420 (500)
T PF00201_consen 394 LTEEELRAAIREVLENPSY----KENAKRLS 420 (500)
T ss_dssp -SHHHHHHHHHHHHHSHHH----HHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhhHH----HHHHHHHH
Confidence 568899999999999854 44444443
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=92.02 E-value=0.67 Score=61.69 Aligned_cols=40 Identities=18% Similarity=0.114 Sum_probs=36.2
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i 838 (1067)
.+.+.+.++|+.|++.| + .+.+.||-....+..+..+.++
T Consensus 726 ~lr~~v~~~I~~l~~ag----i-~v~mlTGD~~~tAi~IA~s~~L 765 (1178)
T PLN03190 726 KLQQGVPEAIESLRTAG----I-KVWVLTGDKQETAISIGYSSKL 765 (1178)
T ss_pred CCchhHHHHHHHHHHCC----C-EEEEECCCCHHHHHHHHHHhCC
Confidence 45688899999999997 8 9999999999999999999887
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=91.81 E-value=0.18 Score=52.56 Aligned_cols=38 Identities=5% Similarity=0.147 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
+.+.+.|+.+++.| + .++|+||-+...+..+++.++++
T Consensus 92 ~~~~e~i~~~~~~~----~-~v~IvS~~~~~~i~~~~~~~~i~ 129 (192)
T PF12710_consen 92 PDAMELIRELKDNG----I-KVVIVSGSPDEIIEPIAERLGID 129 (192)
T ss_dssp TTHHHHHHHHHHTT----S-EEEEEEEEEHHHHHHHHHHTTSS
T ss_pred hhHHHHHHHHHHCC----C-EEEEECCCcHHHHHHHHHHcCCC
Confidence 45668888888886 7 79999999999999999998874
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=91.80 E-value=0.35 Score=49.90 Aligned_cols=55 Identities=11% Similarity=0.115 Sum_probs=42.4
Q ss_pred EEEEeCCCCCCCCch-hhHHHHHHHHHHHHhcCCCCceeEEEEECCCC-HHHHHHHHHhcCC
Q 001492 779 VIALDCYDSKGAPDK-KMIQIMYDVFKAVRLDHQTARVTGFALSTAMP-VSETIEFLNSMKI 838 (1067)
Q Consensus 779 lia~DiDGTLl~~~~-~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~-~~~~~~~l~~l~i 838 (1067)
++++|+|||+...+. .+.+.+.++|+.|++.| + .++|+|+.+ ...+..+++.+++
T Consensus 27 ~vv~D~Dgtl~~~~~~~~~pgv~e~L~~Lk~~g----~-~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 27 GVVLDKDNTLVYPDHNEAYPALRDWIEELKAAG----R-KLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred EEEEecCCccccCCCCCcChhHHHHHHHHHHcC----C-EEEEEeCCchHHHHHHHHHHcCC
Confidence 444499999776543 67789999999999987 7 899999988 5666666677554
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=91.53 E-value=0.39 Score=49.69 Aligned_cols=40 Identities=18% Similarity=0.183 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHHHhcCCCCceeEEEEECCC-CHHHHHHHHHhcCCC
Q 001492 795 MIQIMYDVFKAVRLDHQTARVTGFALSTAM-PVSETIEFLNSMKIE 839 (1067)
Q Consensus 795 i~~~~~~al~~l~~~g~~g~i~~~vIaTGR-~~~~~~~~l~~l~i~ 839 (1067)
+-+.+.++|+.|+++| + .++|+|+. +...+..+++.+++.
T Consensus 46 l~pGv~elL~~Lk~~G----~-~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 46 LIKEVRDVLQTLKDAG----T-YLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred EcccHHHHHHHHHHCC----C-EEEEEeCCCChHHHHHHHHhCCcC
Confidence 3477899999999987 7 89999988 888888999998873
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >COG4370 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=91.34 E-value=2.3 Score=46.90 Aligned_cols=142 Identities=21% Similarity=0.275 Sum_probs=83.9
Q ss_pred eC-CCCCCCHHHHHHHHHhcccccCCCcEEE---EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCC------C
Q 001492 487 SR-PDPKKNITTLLKAFGECRPLRELANLTL---IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPK------H 556 (1067)
Q Consensus 487 gR-ld~~Kgi~~ll~A~~~l~~l~~~~~l~l---IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g------~ 556 (1067)
+| ++...|+..++.++..+.. ....+++ ++..-+ +..+..+..+.+|.+.-...+ +
T Consensus 234 sR~pea~~nl~~il~slcal~~--~~a~vvfw~ai~~~lp------------l~~l~~l~e~~gWq~~ad~~~kdnc~l~ 299 (412)
T COG4370 234 SRVPEAQTNLAVILGSLCALPA--MFALVVFWAAIAPELP------------LLLLWTLEERQGWQPLADRFGKDNCSLW 299 (412)
T ss_pred CCChHHHhhHHHHHHHHhhhHH--HHHHHHHHhccCcCCC------------HHHHHHHHHhcCcchhhhhhccCceEEE
Confidence 45 5667899999987766632 1122111 222222 233344555555543222111 3
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCC-CHHHHHHHHcCCCEEEcCCCCch------hhhc--cCCceEEeCCCCHHH
Q 001492 557 HKQYDVPEIYRLAAKTKGVFINPALVEPF-GLTLIEAAAHGLPMVATKNGGPV------DIHR--ALNNGLLVDPHDQQA 627 (1067)
Q Consensus 557 ~~~~dl~~ly~~A~~~~dV~v~ps~~Egf-gltllEAmA~G~PVVat~~Gg~~------eiv~--~~~~Gllv~p~d~~~ 627 (1067)
+++....+++..| |+.+ +| |...-.|+..|+|||+...-|+. +--. -+..=.+++|. .++
T Consensus 300 lsqqsfadiLH~a----daal------gmAGTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~~-aq~ 368 (412)
T COG4370 300 LSQQSFADILHAA----DAAL------GMAGTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRPE-AQA 368 (412)
T ss_pred EeHHHHHHHHHHH----HHHH------HhccchHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCCc-hhh
Confidence 4567889999999 7755 34 33344467779999998765542 2100 02234566653 344
Q ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHH
Q 001492 628 IADALLKLVSEKNLWVECRKNGWKNI 653 (1067)
Q Consensus 628 la~aL~~ll~d~~~~~~~~~~~~~~~ 653 (1067)
-+.+..+++.||+..+.++.|+++++
T Consensus 369 a~~~~q~ll~dp~r~~air~nGqrRi 394 (412)
T COG4370 369 AAQAVQELLGDPQRLTAIRHNGQRRI 394 (412)
T ss_pred HHHHHHHHhcChHHHHHHHhcchhhc
Confidence 34445559999999999999999998
|
|
| >PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E | Back alignment and domain information |
|---|
Probab=91.28 E-value=23 Score=38.88 Aligned_cols=141 Identities=15% Similarity=0.123 Sum_probs=75.8
Q ss_pred EEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHH-----------HHhcCCC--Cc
Q 001492 484 LALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKL-----------IDKYDLY--GQ 550 (1067)
Q Consensus 484 l~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l-----------~~~~~l~--~~ 550 (1067)
+++||..-.||...+++.-+.. +.+ +++.-++-+-+. . .. .-.|... +++..+. ..
T Consensus 187 ~yigR~Tt~kG~~~mfD~h~~~--lK~-~~~~t~~~Gier------S-~A-~~~i~d~~~~~~y~~~~~~~~~~~~pN~~ 255 (355)
T PF11440_consen 187 RYIGRQTTWKGPRRMFDLHEKI--LKP-AGFKTIMEGIER------S-PA-KISIKDHGIPYEYYPKLDCDEPKPAPNSP 255 (355)
T ss_dssp EEE--SSGGG-HHHHHHHHHHT--TTT-TT-EEEEE---S------S-TH-HHHHHHTT--EEEE-CTGGGG---SSS--
T ss_pred eeeeeeeeecCcHHHhhhHHHh--cCC-cchhHHhhhhhc------C-Cc-eeeeecCCcccccCccccccCcccCCCCc
Confidence 8999999999999999999886 334 777665544321 0 00 1111111 1111111 23
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecC------CCCCCCHHHHHHHHcCC-CEEEcCCCCchh-------hhccCCc
Q 001492 551 VAYPKHHKQYDVPEIYRLAAKTKGVFINPA------LVEPFGLTLIEAAAHGL-PMVATKNGGPVD-------IHRALNN 616 (1067)
Q Consensus 551 V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps------~~EgfgltllEAmA~G~-PVVat~~Gg~~e-------iv~~~~~ 616 (1067)
+-.+|..-.+|.-+.++.+ .....-+ +.+.+-.+-+|..|||. ||.-...|...- ++..-..
T Consensus 256 ~~v~~~Yi~~E~~~~Maks----~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~ 331 (355)
T PF11440_consen 256 VPVYGPYIRSEGLERMAKS----LFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYS 331 (355)
T ss_dssp EEEESS--HHHHHHHHHTE----EEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S
T ss_pred ceecchhhhHHHHHHHhhc----cceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCcc
Confidence 5556666677777888877 3333222 13568889999999996 666665554322 3334456
Q ss_pred eEEeCCCCHHHHHHHHHHhhcCH
Q 001492 617 GLLVDPHDQQAIADALLKLVSEK 639 (1067)
Q Consensus 617 Gllv~p~d~~~la~aL~~ll~d~ 639 (1067)
.+.++-+|.++-.+.|.++-++.
T Consensus 332 ~I~~De~dle~T~ekl~E~a~~~ 354 (355)
T PF11440_consen 332 AIYFDENDLESTVEKLIEVANNR 354 (355)
T ss_dssp -EEE-TTSHHHHHHHHHHHHT-H
T ss_pred eeEeccchHHHHHHHHHHHhccC
Confidence 78899999999999998876653
|
coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=91.26 E-value=0.38 Score=49.80 Aligned_cols=34 Identities=12% Similarity=0.131 Sum_probs=27.5
Q ss_pred HHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEE
Q 001492 974 RYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTL 1010 (1067)
Q Consensus 974 ~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gV 1010 (1067)
...++++|++++++++ |||+.. | ++.=+.+|..+
T Consensus 113 ~~a~~~~~~~~~~~v~-VGDs~~-D-i~aA~~aG~~~ 146 (176)
T TIGR00213 113 LQARKELHIDMAQSYM-VGDKLE-D-MQAGVAAKVKT 146 (176)
T ss_pred HHHHHHcCcChhhEEE-EcCCHH-H-HHHHHHCCCcE
Confidence 5566777888999988 999988 8 88888888754
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=91.22 E-value=0.41 Score=48.98 Aligned_cols=62 Identities=15% Similarity=0.220 Sum_probs=43.1
Q ss_pred eEEEEEEeCCCCCCCCch-----------hhHHHHHHHHHHHHhcCCCCceeEEEEECCC---------------CHHHH
Q 001492 776 RLIVIALDCYDSKGAPDK-----------KMIQIMYDVFKAVRLDHQTARVTGFALSTAM---------------PVSET 829 (1067)
Q Consensus 776 klllia~DiDGTLl~~~~-----------~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR---------------~~~~~ 829 (1067)
++++| |.||||..... .+-+.+.++|++|+++| + .++|+|-- ....+
T Consensus 2 ~~~~~--d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~g----~-~l~IvSN~~g~~~~~~~~~~~~~~~~~~ 74 (161)
T TIGR01261 2 KILFI--DRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKAG----Y-KFVMVTNQDGLGTPSFPQADFDGPHNLM 74 (161)
T ss_pred CEEEE--eCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHCC----C-eEEEEeCCccccCCcCCHHHHHHHHHHH
Confidence 56666 99999665211 23366889999999987 6 78888864 24567
Q ss_pred HHHHHhcCCCCCCCCEEE
Q 001492 830 IEFLNSMKIEANEFDALI 847 (1067)
Q Consensus 830 ~~~l~~l~i~~~~~d~~I 847 (1067)
..+++.+|+. ||.++
T Consensus 75 ~~~l~~~gl~---fd~ii 89 (161)
T TIGR01261 75 LQIFRSQGII---FDDVL 89 (161)
T ss_pred HHHHHHCCCc---eeEEE
Confidence 7788988874 55443
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=90.90 E-value=0.47 Score=57.51 Aligned_cols=68 Identities=9% Similarity=0.133 Sum_probs=49.0
Q ss_pred cCCeEEEEEEeCCCCCCCCch-----------h-hHHHHHHHHHHHHhcCCCCceeEEEEECCCCH------------HH
Q 001492 773 RRRRLIVIALDCYDSKGAPDK-----------K-MIQIMYDVFKAVRLDHQTARVTGFALSTAMPV------------SE 828 (1067)
Q Consensus 773 ~r~klllia~DiDGTLl~~~~-----------~-i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~------------~~ 828 (1067)
.+.|+++| |+||||..... + +.+.+.++|++|+++| + .++|+|.-+- ..
T Consensus 166 ~~~Kia~f--D~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~G----y-~IvIvTNQ~gI~~G~~~~~~~~~k 238 (526)
T TIGR01663 166 GQEKIAGF--DLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEADG----F-KICIFTNQGGIARGKINADDFKAK 238 (526)
T ss_pred ccCcEEEE--ECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHCC----C-EEEEEECCcccccCcccHHHHHHH
Confidence 34476666 99999664311 1 3467889999999997 6 7888887544 34
Q ss_pred HHHHHHhcCCCCCCCCEEEEcC
Q 001492 829 TIEFLNSMKIEANEFDALICSS 850 (1067)
Q Consensus 829 ~~~~l~~l~i~~~~~d~~I~~n 850 (1067)
+..+++.++++ ++.++|..
T Consensus 239 i~~iL~~lgip---fdviia~~ 257 (526)
T TIGR01663 239 IEAIVAKLGVP---FQVFIAIG 257 (526)
T ss_pred HHHHHHHcCCc---eEEEEeCC
Confidence 67889998885 77777754
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=90.78 E-value=0.54 Score=56.56 Aligned_cols=48 Identities=21% Similarity=0.268 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCce
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGE 853 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~ 853 (1067)
+...+.+++++++| + .++|+|+.+...+..+++.+|+ ||.+||+++..
T Consensus 75 pga~e~L~~lk~~G----~-~v~LaTas~~~~a~~i~~~lGl----Fd~Vigsd~~~ 122 (479)
T PRK08238 75 EEVLDYLRAERAAG----R-KLVLATASDERLAQAVAAHLGL----FDGVFASDGTT 122 (479)
T ss_pred hhHHHHHHHHHHCC----C-EEEEEeCCCHHHHHHHHHHcCC----CCEEEeCCCcc
Confidence 67889999999987 6 7999999999999999999886 78899987653
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=90.76 E-value=0.18 Score=53.61 Aligned_cols=51 Identities=14% Similarity=0.197 Sum_probs=39.6
Q ss_pred CCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCcccchhhhhccc
Q 001492 966 LASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTT 1027 (1067)
Q Consensus 966 gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~~~~~~~~a~ 1027 (1067)
.-.|...++.+. ..|. ++++ +||+.| | ++|++.+|.+|+|.--. -++.+|+
T Consensus 130 ~~~K~~~l~~l~-~~~~---~~v~-vGDs~n-D-l~ml~~Ag~~ia~~ak~----~~~~~~~ 180 (203)
T TIGR02137 130 KDPKRQSVIAFK-SLYY---RVIA-AGDSYN-D-TTMLSEAHAGILFHAPE----NVIREFP 180 (203)
T ss_pred cchHHHHHHHHH-hhCC---CEEE-EeCCHH-H-HHHHHhCCCCEEecCCH----HHHHhCC
Confidence 457999999884 5564 5888 999999 9 99999999999996433 3445554
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.67 E-value=3 Score=46.15 Aligned_cols=51 Identities=24% Similarity=0.358 Sum_probs=37.0
Q ss_pred HHHHHHHHhCCCcccEEEEecCCCCCChhhhhc-CCc-eEEEeCCCcccchhhhhc
Q 001492 972 ALRYLFVRWRLNVANMFVILGESGDTDYEELIS-GAH-KTLIMKGVVEKGSEELLR 1025 (1067)
Q Consensus 972 AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~-~ag-~gVaMgNA~e~~~~~~~~ 1025 (1067)
-..+|.++++|+++.++. |||..||| + ||. .+| .++.|--++...++.+..
T Consensus 229 m~~~l~~~~~i~psRt~m-vGDRL~TD-I-lFG~~~G~~TLLvltGv~~led~~~~ 281 (306)
T KOG2882|consen 229 MFEYLLEKFNIDPSRTCM-VGDRLDTD-I-LFGKNCGFKTLLVLSGVTTLEDILEA 281 (306)
T ss_pred HHHHHHHHcCCCcceEEE-Ecccchhh-h-hHhhccCcceEEEecCcCcHHHHHhc
Confidence 456789999999999999 99999999 4 454 445 366776666555544433
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=90.33 E-value=0.59 Score=47.01 Aligned_cols=37 Identities=11% Similarity=-0.048 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCC
Q 001492 796 IQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838 (1067)
Q Consensus 796 ~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i 838 (1067)
-+.+.+.|+.|+ ++ + .++|+|.-+...+..+++.+++
T Consensus 47 ~pG~~e~L~~L~-~~----~-~l~I~Ts~~~~~~~~il~~l~~ 83 (148)
T smart00577 47 RPGVDEFLKRAS-EL----F-ELVVFTAGLRMYADPVLDLLDP 83 (148)
T ss_pred CCCHHHHHHHHH-hc----c-EEEEEeCCcHHHHHHHHHHhCc
Confidence 356788999997 43 7 8999999999999999998776
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=90.20 E-value=1.8 Score=57.62 Aligned_cols=41 Identities=15% Similarity=0.138 Sum_probs=36.9
Q ss_pred hhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCC
Q 001492 793 KKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838 (1067)
Q Consensus 793 ~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i 838 (1067)
.++-+.+.++|+.|++.| | ++.+.||=...++..+..++++
T Consensus 630 D~lq~~v~etI~~L~~AG----I-kv~mlTGD~~~TA~~IA~~~~i 670 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAG----I-KIWVLTGDKVETAINIGYSCRL 670 (1057)
T ss_pred hhhhhccHHHHHHHHHCC----C-eEEEEcCCcHHHHHHHHHHhCC
Confidence 345678889999999998 9 9999999999999999999887
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.08 E-value=1.8 Score=53.78 Aligned_cols=85 Identities=14% Similarity=0.127 Sum_probs=51.9
Q ss_pred HHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCC
Q 001492 936 DDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGV 1015 (1067)
Q Consensus 936 ~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA 1015 (1067)
+++.+.|..+. ..-+.+.++...+=|+- + |++.| ++|+..||+-| | -+-|+.+++|||||=|
T Consensus 672 ~qld~il~nh~-eIVFARTSPqQKLiIVe-~----------cQr~G----aiVaVTGDGVN-D-sPALKKADIGVAMGia 733 (1019)
T KOG0203|consen 672 EQLDELLQNHQ-EIVFARTSPQQKLIIVE-G----------CQRQG----AIVAVTGDGVN-D-SPALKKADIGVAMGIA 733 (1019)
T ss_pred HHHHHHHHhCC-ceEEEecCccceEEeEh-h----------hhhcC----cEEEEeCCCcC-C-Chhhcccccceeeccc
Confidence 45666665543 23334444443444432 1 44444 47777999999 9 9999999999999988
Q ss_pred cccchhhhhcccCcCCCCCCCCCCCceeec
Q 001492 1016 VEKGSEELLRTTNLRDDIVPSESPLIAHVN 1045 (1067)
Q Consensus 1016 ~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt 1045 (1067)
. +++-..|. |.+=.|..-+..||
T Consensus 734 G---SDvsKqAA----DmILLDDNFASIVt 756 (1019)
T KOG0203|consen 734 G---SDVSKQAA----DMILLDDNFASIVT 756 (1019)
T ss_pred c---chHHHhhc----ceEEecCcchhhee
Confidence 7 33333333 34444444444453
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=89.86 E-value=1.9 Score=47.77 Aligned_cols=41 Identities=15% Similarity=0.161 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEe
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIM 1012 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaM 1012 (1067)
+...+.+.++++|++++++++ |||+.+ | +..=+.+|..++.
T Consensus 167 ~Pe~~~~a~~~l~~~p~~~l~-IgDs~~-D-i~aA~~aG~~~i~ 207 (260)
T PLN03243 167 DPEMFMYAAERLGFIPERCIV-FGNSNS-S-VEAAHDGCMKCVA 207 (260)
T ss_pred CHHHHHHHHHHhCCChHHeEE-EcCCHH-H-HHHHHHcCCEEEE
Confidence 457889999999999999999 999999 9 9998888875543
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.45 E-value=1.6 Score=54.84 Aligned_cols=73 Identities=15% Similarity=0.277 Sum_probs=55.7
Q ss_pred HHHHHHHHHHhcCCcEEEEEeeCC---------------eeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCC
Q 001492 934 RIDDLRQKLRMRGLRCHPMYCRNS---------------TRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTD 998 (1067)
Q Consensus 934 ~~~el~~~L~~~~~~~~v~~s~~~---------------~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D 998 (1067)
...+..+.|+..+.+. ++.++++ .+-|++|. .|...++.|.++. +.++++||+-| |
T Consensus 541 ~a~~aI~~L~~~Gi~~-~mLTGDn~~~A~~iA~~lGId~v~AellPe--dK~~~V~~l~~~g-----~~VamVGDGIN-D 611 (713)
T COG2217 541 DAKEAIAALKALGIKV-VMLTGDNRRTAEAIAKELGIDEVRAELLPE--DKAEIVRELQAEG-----RKVAMVGDGIN-D 611 (713)
T ss_pred hHHHHHHHHHHCCCeE-EEEcCCCHHHHHHHHHHcChHhheccCCcH--HHHHHHHHHHhcC-----CEEEEEeCCch-h
Confidence 3456667788888773 4444433 25677785 6999999998543 46777999999 9
Q ss_pred hhhhhcCCceEEEeCCCc
Q 001492 999 YEELISGAHKTLIMKGVV 1016 (1067)
Q Consensus 999 ~~eML~~ag~gVaMgNA~ 1016 (1067)
-+-|..+..|||||.+.
T Consensus 612 -APALA~AdVGiAmG~Gt 628 (713)
T COG2217 612 -APALAAADVGIAMGSGT 628 (713)
T ss_pred -HHHHhhcCeeEeecCCc
Confidence 99999999999999977
|
|
| >PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway | Back alignment and domain information |
|---|
Probab=89.16 E-value=0.98 Score=51.34 Aligned_cols=217 Identities=12% Similarity=0.175 Sum_probs=107.7
Q ss_pred eEEEEEEeCCCCCCCCchhh--H-HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHH----------Hhc-CCCCC
Q 001492 776 RLIVIALDCYDSKGAPDKKM--I-QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFL----------NSM-KIEAN 841 (1067)
Q Consensus 776 klllia~DiDGTLl~~~~~i--~-~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l----------~~l-~i~~~ 841 (1067)
++-++-+|.|+||-.+.+.+ + +-+..+|+ |-++| + .|.|+|.=.|.++.++- ++. .++..
T Consensus 146 ~L~LvTFDgDvTLY~DG~sl~~d~pvi~~ii~-LL~~g----v-~VgIVTAAGY~~a~kY~~RL~GLL~a~~~~~~Lt~~ 219 (408)
T PF06437_consen 146 GLKLVTFDGDVTLYEDGASLEPDNPVIPRIIK-LLRRG----V-KVGIVTAAGYPGAEKYEERLHGLLDAFKDSTDLTPE 219 (408)
T ss_pred CceEEEEcCCcccccCCCCCCCCchHHHHHHH-HHhcC----C-eEEEEeCCCCCChHHHHHHHHHHHHHHHhccCCCHH
Confidence 55577779999987654444 2 33444444 44555 7 78888877666655443 332 33321
Q ss_pred CCCEEEEcCCce--EE-ecCCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccC----CCCCCCCCCCccccc
Q 001492 842 EFDALICSSGGE--MY-YPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEG----GENSKNSSSPIQEDQ 914 (1067)
Q Consensus 842 ~~d~~I~~nGa~--I~-~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~----~~~~~~~~~~~~~~~ 914 (1067)
.-..++-..|-. ++ +.... .....++.+..|...-...|..+.+...+..-...... .+. ...++..
T Consensus 220 qk~~l~VMGGEsNYLfr~~~~~-~~~L~~v~~~~W~~~~m~~W~~~dI~~lLD~AE~~L~~~~~~l~L----pa~IiRK- 293 (408)
T PF06437_consen 220 QKSNLYVMGGESNYLFRYDPES-PHGLEFVPREEWLLPEMKTWSEEDITELLDIAEAALRDCVKRLNL----PATIIRK- 293 (408)
T ss_pred HhcCEEEecccceeEEEecCCC-CCCeEEccHHhccCccccCcCHHHHHHHHHHHHHHHHHHHHHcCC----CeeEEee-
Confidence 111233333332 11 22110 11124567778887777889887777665433222111 000 0000000
Q ss_pred ccCCceEEEEEecCCC--chHHHH----HHHHHHHhcCCcEEEEEe--eCC--eeEEEecCCCCHHHHHHHHHHHh----
Q 001492 915 KSSNAHCISYLIKDPS--KARRID----DLRQKLRMRGLRCHPMYC--RNS--TRMQIVPLLASRSQALRYLFVRW---- 980 (1067)
Q Consensus 915 ~~~~~~ki~~~~~~~~--~~~~~~----el~~~L~~~~~~~~v~~s--~~~--~~lEI~p~gasKg~AL~~L~~~~---- 980 (1067)
...+-..-.... .-..++ .+++.|........+-+| .++ -++|| .+|.-|++.|.+++
T Consensus 294 ----~RAVGivP~~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDI----GdKs~GV~~lQ~y~~~~~ 365 (408)
T PF06437_consen 294 ----ERAVGIVPKPGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDI----GDKSLGVRALQKYFDPEG 365 (408)
T ss_pred ----cceeeEecCCCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEc----CCcHHhHHHHHHHHHhcc
Confidence 001111101111 011122 233444432222222222 222 25666 58999999999999
Q ss_pred CCCcccEEEEecCC----C-CCChhhhhcCCceEEEeCCCc
Q 001492 981 RLNVANMFVILGES----G-DTDYEELISGAHKTLIMKGVV 1016 (1067)
Q Consensus 981 gi~~e~vva~fGDs----~-N~D~~eML~~ag~gVaMgNA~ 1016 (1067)
+|.+++++= +||. | | |+-. +.++..+-+.|=.
T Consensus 366 ~i~~~~tLH-VGDQF~s~GaN-Dfka--R~a~~t~WIasP~ 402 (408)
T PF06437_consen 366 GIKPSETLH-VGDQFLSAGAN-DFKA--RLACTTAWIASPQ 402 (408)
T ss_pred CCCccceee-ehhhhhccCCc-chhh--hhhceeeEecCHH
Confidence 999999999 9995 3 7 7211 2355566665543
|
; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=88.81 E-value=1.1 Score=46.57 Aligned_cols=35 Identities=23% Similarity=0.193 Sum_probs=25.9
Q ss_pred HHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEE
Q 001492 973 LRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTL 1010 (1067)
Q Consensus 973 L~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gV 1010 (1067)
+.++++++|++++++++ |||+.+ | +.+-+.+|..+
T Consensus 109 ~~~~~~~l~~~~~~~~~-VgDs~~-D-i~~A~~aG~~~ 143 (181)
T PRK08942 109 LLSIAERLNIDLAGSPM-VGDSLR-D-LQAAAAAGVTP 143 (181)
T ss_pred HHHHHHHcCCChhhEEE-EeCCHH-H-HHHHHHCCCeE
Confidence 33445556788888888 999988 8 88888887643
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=88.53 E-value=0.69 Score=52.92 Aligned_cols=64 Identities=13% Similarity=0.069 Sum_probs=44.2
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhc----CCCCceeEEEEE---CCCCHHHHHHHH-HhcCCCCCCCCEEEEc
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLD----HQTARVTGFALS---TAMPVSETIEFL-NSMKIEANEFDALICS 849 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~----g~~g~i~~~vIa---TGR~~~~~~~~l-~~l~i~~~~~d~~I~~ 849 (1067)
.|.+||||||.+.+ .+.+...++++.|+.. | + .+++. +|++.......+ +.+|++. .++-++++
T Consensus 2 ~~ifD~DGvL~~g~-~~i~ga~eal~~L~~~~~~~g----~-~~~flTNn~g~s~~~~~~~l~~~lG~~~-~~~~i~~s 73 (321)
T TIGR01456 2 GFAFDIDGVLFRGK-KPIAGASDALRRLNRNQGQLK----I-PYIFLTNGGGFSERARAEEISSLLGVDV-SPLQVIQS 73 (321)
T ss_pred EEEEeCcCceECCc-cccHHHHHHHHHHhccccccC----C-CEEEEecCCCCCHHHHHHHHHHHcCCCC-CHHHHHhh
Confidence 45569999988764 4578889999999986 6 4 34443 578888866655 8888864 23334443
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=88.49 E-value=21 Score=41.33 Aligned_cols=80 Identities=14% Similarity=0.064 Sum_probs=50.2
Q ss_pred CCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhc
Q 001492 492 KKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAK 571 (1067)
Q Consensus 492 ~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~ 571 (1067)
.+.++.+++++.++.+ .. +.+++...+.. +.+.....+. ..+.+.+ +..++|+.|
T Consensus 182 ~~llP~~~~aa~~L~~--~~--~~~~i~~a~~~-----------~~i~~~~~~~---~~~~~~~-----~~~~~m~~a-- 236 (347)
T PRK14089 182 KRLMPIFKELAKKLEG--KE--KILVVPSFFKG-----------KDLKEIYGDI---SEFEISY-----DTHKALLEA-- 236 (347)
T ss_pred HHHHHHHHHHHHHHhh--cC--cEEEEeCCCcH-----------HHHHHHHhcC---CCcEEec-----cHHHHHHhh--
Confidence 4667778899988853 22 44444333321 2233333322 1333332 567899999
Q ss_pred CCcEEEecCCCCCCCHHHHHHHHcCCCEEEcC
Q 001492 572 TKGVFINPALVEPFGLTLIEAAAHGLPMVATK 603 (1067)
Q Consensus 572 ~~dV~v~ps~~EgfgltllEAmA~G~PVVat~ 603 (1067)
|+.+..| |.+.+|++.+|+|.|..-
T Consensus 237 --Dlal~~S-----GT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 237 --EFAFICS-----GTATLEAALIGTPFVLAY 261 (347)
T ss_pred --hHHHhcC-----cHHHHHHHHhCCCEEEEE
Confidence 9988764 888889999999999854
|
|
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=88.11 E-value=69 Score=38.70 Aligned_cols=134 Identities=12% Similarity=0.173 Sum_probs=74.5
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCC-hhhhhccchHHHHHHHHHHHhcCCCCcEEeCC
Q 001492 479 HKPMILALSRPD--PKKNITTLLKAFGECRPLRELANLTLIMGNRDD-IEEMSSGNASVLITVLKLIDKYDLYGQVAYPK 555 (1067)
Q Consensus 479 ~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~-~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g 555 (1067)
+..+.++.|... +.+-+..++.+++.+. . .+..++.+... ..+ .+. ....++. .+++.+.+
T Consensus 275 ~sVVyvSfGS~~~~~~~q~~ela~~l~~~~----~-~flW~~r~~~~~~~~-------~lp--~~f~er~--~~~g~i~~ 338 (468)
T PLN02207 275 ASVVFLCFGSMGRLRGPLVKEIAHGLELCQ----Y-RFLWSLRTEEVTNDD-------LLP--EGFLDRV--SGRGMICG 338 (468)
T ss_pred CcEEEEEeccCcCCCHHHHHHHHHHHHHCC----C-cEEEEEeCCCccccc-------cCC--HHHHhhc--CCCeEEEE
Confidence 455677778654 3345677777777662 1 34345553210 000 000 0111122 24556668
Q ss_pred CCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc----hh-hhccCCceEEeC---------
Q 001492 556 HHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----VD-IHRALNNGLLVD--------- 621 (1067)
Q Consensus 556 ~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~----~e-iv~~~~~Gllv~--------- 621 (1067)
+.|+.++ ++..+ .+.||.= -|+ .+++||+.+|+|+|+-...+= .. +++....|+-+.
T Consensus 339 W~PQ~~I---L~H~~--vg~FvTH---~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~ 409 (468)
T PLN02207 339 WSPQVEI---LAHKA--VGGFVSH---CGW-NSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDE 409 (468)
T ss_pred eCCHHHH---hcccc--cceeeec---Ccc-ccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCC
Confidence 9887765 34431 1456632 233 478999999999999765432 22 233244565331
Q ss_pred CCCHHHHHHHHHHhhc
Q 001492 622 PHDQQAIADALLKLVS 637 (1067)
Q Consensus 622 p~d~~~la~aL~~ll~ 637 (1067)
.-+.++++++|.+++.
T Consensus 410 ~v~~e~i~~av~~vm~ 425 (468)
T PLN02207 410 IVNANEIETAIRCVMN 425 (468)
T ss_pred cccHHHHHHHHHHHHh
Confidence 1267899999999996
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=87.88 E-value=0.91 Score=46.98 Aligned_cols=41 Identities=10% Similarity=0.075 Sum_probs=32.9
Q ss_pred cCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEE
Q 001492 964 PLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTL 1010 (1067)
Q Consensus 964 p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gV 1010 (1067)
+.+..|+..++.+...+ ++++++ +||+.| | ++|.+.++.-.
T Consensus 145 ~~g~~K~~~~~~~~~~~---~~~~i~-iGD~~~-D-~~aa~~~d~~~ 185 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPK---YQHIIY-IGDGVT-D-VCPAKLSDVVF 185 (188)
T ss_pred CCCCCHHHHHHHHHhhc---CceEEE-ECCCcc-h-hchHhcCCccc
Confidence 46677999999988765 577877 999999 9 99988876543
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=87.77 E-value=0.61 Score=54.65 Aligned_cols=44 Identities=11% Similarity=0.046 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceE-EEeCCC
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKT-LIMKGV 1015 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~g-VaMgNA 1015 (1067)
+...+...++++|++++++++ |||+.+ | ++.=+.+|.. |++...
T Consensus 152 ~p~~~~~a~~~lgv~p~~~l~-VGDs~~-D-i~aA~~aGi~~I~v~~g 196 (382)
T PLN02940 152 SPDIFLEAAKRLNVEPSNCLV-IEDSLP-G-VMAGKAAGMEVIAVPSI 196 (382)
T ss_pred CHHHHHHHHHHcCCChhHEEE-EeCCHH-H-HHHHHHcCCEEEEECCC
Confidence 567899999999999999999 999999 9 9998888854 455443
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=87.55 E-value=1.5 Score=50.24 Aligned_cols=66 Identities=12% Similarity=0.201 Sum_probs=48.4
Q ss_pred CeEEEEEEeCCCCCCCC---ch--------hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHh----cCCC
Q 001492 775 RRLIVIALDCYDSKGAP---DK--------KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNS----MKIE 839 (1067)
Q Consensus 775 ~klllia~DiDGTLl~~---~~--------~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~----l~i~ 839 (1067)
+|++++ |+|+||..- +. ...+.+.++|++|+++| + .++|||..+...+...|+. +++.
T Consensus 3 ~k~~v~--DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~G----i-~lai~S~n~~~~a~~~l~~~~~~~~~~ 75 (320)
T TIGR01686 3 LKVLVL--DLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQG----F-LLALASKNDEDDAKKVFERRKDFILQA 75 (320)
T ss_pred eEEEEE--cCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhCC----C-EEEEEcCCCHHHHHHHHHhCccccCcH
Confidence 365555 999996432 11 23478999999999997 8 8999999999999999998 6663
Q ss_pred CCCCCEEEE
Q 001492 840 ANEFDALIC 848 (1067)
Q Consensus 840 ~~~~d~~I~ 848 (1067)
..|+.+++
T Consensus 76 -~~f~~~~~ 83 (320)
T TIGR01686 76 -EDFDARSI 83 (320)
T ss_pred -HHeeEEEE
Confidence 23444444
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=87.53 E-value=59 Score=37.55 Aligned_cols=104 Identities=12% Similarity=0.087 Sum_probs=58.3
Q ss_pred CCcEEEEEeCCCCCCCHH--HHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCC
Q 001492 479 HKPMILALSRPDPKKNIT--TLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKH 556 (1067)
Q Consensus 479 ~~~~Il~vgRld~~Kgi~--~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 556 (1067)
...+++..|.-.+.|.++ ...+.+..+.+ ....+ +++|+..+.+ ......+.+.......+.+.|.
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~--~~~~v-vl~ggp~e~e---------~~~~~~i~~~~~~~~~~~l~g~ 250 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA--RGYEV-VLTSGPDKDD---------LACVNEIAQGCQTPPVTALAGK 250 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH--CCCeE-EEEcCCChHH---------HHHHHHHHHhcCCCccccccCC
Confidence 344566766655566544 55555555532 22223 3444432111 1111222232222234567888
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcC
Q 001492 557 HKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATK 603 (1067)
Q Consensus 557 ~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~ 603 (1067)
.+-.++.++++.| ++||-. ++ | .+-=|.|.|+|+|+=.
T Consensus 251 ~sL~el~ali~~a----~l~v~n---DS-G-p~HlAaA~g~P~v~lf 288 (352)
T PRK10422 251 TTFPELGALIDHA----QLFIGV---DS-A-PAHIAAAVNTPLICLF 288 (352)
T ss_pred CCHHHHHHHHHhC----CEEEec---CC-H-HHHHHHHcCCCEEEEE
Confidence 8889999999999 998855 22 2 3334678899999854
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=86.14 E-value=1.3 Score=51.11 Aligned_cols=64 Identities=17% Similarity=0.263 Sum_probs=45.5
Q ss_pred CeEEEEEEeCCCCCCCC-----------chhhHHHHHHHHHHHHhcCCCCceeEEEEECCC---------------CHHH
Q 001492 775 RRLIVIALDCYDSKGAP-----------DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAM---------------PVSE 828 (1067)
Q Consensus 775 ~klllia~DiDGTLl~~-----------~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR---------------~~~~ 828 (1067)
++++|| |-||||... +..+-+.+.++|..|+++| + .++|+|.- +...
T Consensus 2 ~k~l~l--DrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~G----~-kL~IvTNq~g~G~~~~~~~~l~~~~~~ 74 (354)
T PRK05446 2 QKILFI--DRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKAG----Y-KLVMVTNQDGLGTDSFPQEDFDPPHNL 74 (354)
T ss_pred CcEEEE--eCCCCccCCCCccccccCcccceECcCHHHHHHHHHhCC----C-eEEEEECCccccCccccHHHHhhHHHH
Confidence 477777 999995542 2345577899999999887 7 78999983 2445
Q ss_pred HHHHHHhcCCCCCCCCE-EEE
Q 001492 829 TIEFLNSMKIEANEFDA-LIC 848 (1067)
Q Consensus 829 ~~~~l~~l~i~~~~~d~-~I~ 848 (1067)
+..+++.+++. |+. ++|
T Consensus 75 i~~iL~~~gl~---fd~i~i~ 92 (354)
T PRK05446 75 MMQIFESQGIK---FDEVLIC 92 (354)
T ss_pred HHHHHHHcCCc---eeeEEEe
Confidence 66788888874 444 345
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=86.09 E-value=1.2 Score=46.05 Aligned_cols=43 Identities=16% Similarity=0.243 Sum_probs=32.1
Q ss_pred eEEEEEEeCCCCCCCC-------chhhHHHHHHHHHHHHhcCCCCceeEEEEECCCC
Q 001492 776 RLIVIALDCYDSKGAP-------DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMP 825 (1067)
Q Consensus 776 klllia~DiDGTLl~~-------~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~ 825 (1067)
|++|| |.||||... .-.+-+..+++|++|+++| + .++|+|+-+
T Consensus 5 ~~~~~--d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G----~-~l~I~Tn~~ 54 (173)
T PRK06769 5 QAIFI--DRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANH----I-KIFSFTNQP 54 (173)
T ss_pred cEEEE--eCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCC----C-EEEEEECCc
Confidence 56666 999996322 1124578899999999987 7 789999865
|
|
| >PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia | Back alignment and domain information |
|---|
Probab=85.60 E-value=75 Score=36.55 Aligned_cols=118 Identities=18% Similarity=0.311 Sum_probs=83.8
Q ss_pred HHHHHhcCC--CCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCc
Q 001492 539 LKLIDKYDL--YGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNN 616 (1067)
Q Consensus 539 ~~l~~~~~l--~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~ 616 (1067)
...+..+++ .++..|-|.+ +++.+++.-. |++|.--+--+.+..-.|++.-|=|.|-.. .+++ +.
T Consensus 241 ~~f~~~ldlvr~gkasfegR~---~~p~fla~~t---D~VvSHqWeN~lNYlY~daLyggYPLVHNS-----~~l~--d~ 307 (364)
T PF10933_consen 241 VNFANSLDLVRDGKASFEGRF---DFPDFLAQHT---DAVVSHQWENPLNYLYYDALYGGYPLVHNS-----PLLK--DV 307 (364)
T ss_pred HHHHHhhHHhhcCeeEEeeec---ChHHHHHhCC---CEEEeccccchhhHHHHHHHhcCCCcccCc-----chhc--cc
Confidence 344455544 4677787775 6777777653 887766666688999999999999999743 2333 26
Q ss_pred eEEeCCCCHHHHHHHHHHhhc-CHHHHHHHHHHHHHHHHcCCH--HHHHHHHHHHH
Q 001492 617 GLLVDPHDQQAIADALLKLVS-EKNLWVECRKNGWKNIHLFSW--PEHCRTYLTRV 669 (1067)
Q Consensus 617 Gllv~p~d~~~la~aL~~ll~-d~~~~~~~~~~~~~~~~~fsw--~~~a~~~l~~~ 669 (1067)
|+..+-.|..+=+++|.+++. ....+...++.+++.+..++. +..++.|.+.+
T Consensus 308 GYYY~~fD~~~G~r~L~~A~~~HD~~~~~Y~~ra~~~l~~~~p~n~~nv~~y~~~L 363 (364)
T PF10933_consen 308 GYYYPDFDAFEGARQLLRAIREHDADLDAYRARARRLLDRLSPENPANVRAYEARL 363 (364)
T ss_pred CcCCCCccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhhCCCCHHHHHHHHHhh
Confidence 999999999999999999988 344567788888877754443 44455555543
|
|
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=85.08 E-value=3.2 Score=45.62 Aligned_cols=66 Identities=21% Similarity=0.298 Sum_probs=48.4
Q ss_pred EEEEeCCCCCCCCch--hh-HHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcC
Q 001492 779 VIALDCYDSKGAPDK--KM-IQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSS 850 (1067)
Q Consensus 779 lia~DiDGTLl~~~~--~i-~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~n 850 (1067)
+|++|+|.||.+++. +| .+.+.+.+.+|++.| -+ .+.-++|- ..-+..-+++++++ .-||++||.+
T Consensus 124 VIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~~g---~v-LvLWSyG~-~eHV~~sl~~~~L~-~~Fd~ii~~G 192 (297)
T PF05152_consen 124 VIVFDLDSTLITDEGDVRIRDPAVYDSLRELKEQG---CV-LVLWSYGN-REHVRHSLKELKLE-GYFDIIICGG 192 (297)
T ss_pred EEEEECCCcccccCCccccCChHHHHHHHHHHHcC---CE-EEEecCCC-HHHHHHHHHHhCCc-cccEEEEeCC
Confidence 444599999776533 33 478899999999996 36 46666665 56677888888886 4599999864
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=84.88 E-value=2.3 Score=46.80 Aligned_cols=39 Identities=5% Similarity=-0.087 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHhcCCCCceeEEEEECCCCH---HHHHHHHHhcCCC
Q 001492 796 IQIMYDVFKAVRLDHQTARVTGFALSTAMPV---SETIEFLNSMKIE 839 (1067)
Q Consensus 796 ~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~---~~~~~~l~~l~i~ 839 (1067)
.+.+.+..+.++++| + .|++.|||+- ......|...|++
T Consensus 147 lp~al~ly~~l~~~G----~-kIf~VSgR~e~~r~aT~~NL~kaGy~ 188 (275)
T TIGR01680 147 LPETLKNYNKLVSLG----F-KIIFLSGRLKDKQAVTEANLKKAGYH 188 (275)
T ss_pred ChHHHHHHHHHHHCC----C-EEEEEeCCchhHHHHHHHHHHHcCCC
Confidence 467788899999998 7 8999999974 3356678887874
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=84.81 E-value=1.3 Score=43.45 Aligned_cols=118 Identities=23% Similarity=0.175 Sum_probs=60.6
Q ss_pred CChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCC-CCccCcc
Q 001492 190 TGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFG-PRDKYLR 268 (1067)
Q Consensus 190 ~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~-~~~~~l~ 268 (1067)
++|...=.+-|+++|.++| |+|.+.|... +.+ .-+..|+.++.++.. +.....
T Consensus 8 t~Ghv~P~lala~~L~~rG--h~V~~~~~~~--------~~~---------------~v~~~Gl~~~~~~~~~~~~~~~- 61 (139)
T PF03033_consen 8 TRGHVYPFLALARALRRRG--HEVRLATPPD--------FRE---------------RVEAAGLEFVPIPGDSRLPRSL- 61 (139)
T ss_dssp SHHHHHHHHHHHHHHHHTT---EEEEEETGG--------GHH---------------HHHHTT-EEEESSSCGGGGHHH-
T ss_pred ChhHHHHHHHHHHHHhccC--CeEEEeeccc--------cee---------------cccccCceEEEecCCcCcCccc-
Confidence 7799998999999999999 9999998732 111 112458888887764 110000
Q ss_pred cccccchhHHHHHHHHHHHHHHhHHHHhhhc-----CCCCCCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCC
Q 001492 269 KELLWPYIQEFVDGALAHCLNMSKVLGEQIG-----GGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSL 338 (1067)
Q Consensus 269 k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~-----~~~~~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l 338 (1067)
.....+..+.. ....+.++.+.+.++.. -+....+|++.++. ....+..++.++++|.+.+....
T Consensus 62 --~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~vaE~~~iP~~~~~~~p 131 (139)
T PF03033_consen 62 --EPLANLRRLAR-LIRGLEEAMRILARFRPDLVVAAGGYVADDVIIAAP--LAFAAALVAEQLGIPGVANRLFP 131 (139)
T ss_dssp --HHHHHHHCHHH-HHHHHHHHHHHHHHHHHCCCCHCTTTTECCEECHHH--HHTHHHHHHHHHTS-EEEEESSG
T ss_pred --chhhhhhhHHH-HhhhhhHHHHHhhccCcchhhhccCcccchHHHhhh--hcCccceeEhhhCchHHHHhhCC
Confidence 00011111111 11112222222222110 11112345554332 35566778888999999887754
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B .... |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=84.81 E-value=1.6 Score=46.60 Aligned_cols=37 Identities=5% Similarity=-0.059 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 798 IMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 798 ~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
.+.++|+.|+++| + .++|+||-....+..+++.+++.
T Consensus 89 g~~~~l~~l~~~g----~-~~~IvS~~~~~~~~~~l~~~~i~ 125 (219)
T TIGR00338 89 GAEELVKTLKEKG----Y-KVAVISGGFDLFAEHVKDKLGLD 125 (219)
T ss_pred CHHHHHHHHHHCC----C-EEEEECCCcHHHHHHHHHHcCCC
Confidence 3455666666665 5 67888887777777777777763
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=84.78 E-value=1.8 Score=37.95 Aligned_cols=48 Identities=21% Similarity=0.210 Sum_probs=37.6
Q ss_pred HHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCc-eEEEeCCCcccch
Q 001492 971 QALRYLFVRWRLNVANMFVILGESGDTDYEELISGAH-KTLIMKGVVEKGS 1020 (1067)
Q Consensus 971 ~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag-~gVaMgNA~e~~~ 1020 (1067)
..+...+++++++++++++ +||+..|| +.+=+.+| .+|.+..+....+
T Consensus 8 ~~~~~a~~~~~~~~~~~~~-VGD~~~~D-i~~a~~~G~~~ilV~tG~~~~~ 56 (75)
T PF13242_consen 8 GMLEQALKRLGVDPSRCVM-VGDSLETD-IEAAKAAGIDTILVLTGVYSPE 56 (75)
T ss_dssp HHHHHHHHHHTSGGGGEEE-EESSTTTH-HHHHHHTTSEEEEESSSSSCCC
T ss_pred HHHHHHHHHcCCCHHHEEE-EcCCcHhH-HHHHHHcCCcEEEECCCCCCHH
Confidence 4577888999999999999 99994449 99988888 4677777664433
|
... |
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=84.63 E-value=8.2 Score=46.50 Aligned_cols=181 Identities=14% Similarity=0.131 Sum_probs=123.0
Q ss_pred ccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCC-cEEe
Q 001492 475 LTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYG-QVAY 553 (1067)
Q Consensus 475 ~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~-~V~~ 553 (1067)
..+.+..++..+..+- |=-+..++.+..+ |...|+-.|++=.-|..- -.++...+..+|+.+ +|.|
T Consensus 754 ~Lp~d~vvf~~FNqLy--KidP~~l~~W~~I--Lk~VPnS~LwllrfPa~g---------e~rf~ty~~~~Gl~p~riif 820 (966)
T KOG4626|consen 754 GLPEDAVVFCNFNQLY--KIDPSTLQMWANI--LKRVPNSVLWLLRFPAVG---------EQRFRTYAEQLGLEPDRIIF 820 (966)
T ss_pred CCCCCeEEEeechhhh--cCCHHHHHHHHHH--HHhCCcceeEEEeccccc---------hHHHHHHHHHhCCCccceee
Confidence 3445555555555442 3335666777666 355566444332222111 156778888888865 6778
Q ss_pred CCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcC-------CCCchhhhccCCceEEeCCCCHH
Q 001492 554 PKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATK-------NGGPVDIHRALNNGLLVDPHDQQ 626 (1067)
Q Consensus 554 ~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~-------~Gg~~eiv~~~~~Gllv~p~d~~ 626 (1067)
..-...+|=..-+..| ||++-+++.-|- .|-.|.+.+|+|+|.-. +++ .++...+.|-+|- .+.+
T Consensus 821 s~va~k~eHvrr~~La----Dv~LDTplcnGh-TTg~dvLw~GvPmVTmpge~lAsrVa~--Sll~~~Gl~hlia-k~~e 892 (966)
T KOG4626|consen 821 SPVAAKEEHVRRGQLA----DVCLDTPLCNGH-TTGMDVLWAGVPMVTMPGETLASRVAA--SLLTALGLGHLIA-KNRE 892 (966)
T ss_pred ccccchHHHHHhhhhh----hhcccCcCcCCc-ccchhhhccCCceeecccHHHHHHHHH--HHHHHcccHHHHh-hhHH
Confidence 7776777878889999 999988877553 46678899999999643 222 1222334455553 4788
Q ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHH--H-cCCHHHHHHHHHHHHHHhHhcC
Q 001492 627 AIADALLKLVSEKNLWVECRKNGWKNI--H-LFSWPEHCRTYLTRVAACRMRH 676 (1067)
Q Consensus 627 ~la~aL~~ll~d~~~~~~~~~~~~~~~--~-~fsw~~~a~~~l~~~~~~~~~~ 676 (1067)
+..+.-.+|-.|.+..+.++..-+... . .|+-.+++..+++.|.+.=.+.
T Consensus 893 EY~~iaV~Latd~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~~y 945 (966)
T KOG4626|consen 893 EYVQIAVRLATDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWKKY 945 (966)
T ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHHHh
Confidence 888888888899999999998888765 2 8999999999999998765544
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=83.36 E-value=2.9 Score=50.02 Aligned_cols=143 Identities=12% Similarity=0.158 Sum_probs=80.8
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCC
Q 001492 479 HKPMILALSRPD--PKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKH 556 (1067)
Q Consensus 479 ~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 556 (1067)
+.-+++++|... +.+-+..+..+++.+. . .+..++......+.-.......+. ....++.. ...+.+.++
T Consensus 270 ~sVvyvsfGS~~~~~~~q~~ela~gL~~s~----~-~FlW~~r~~~~~~~~~~~~~~~lp--~gf~er~~-~~g~~v~~W 341 (451)
T PLN03004 270 KSVVFLCFGSLGLFSKEQVIEIAVGLEKSG----Q-RFLWVVRNPPELEKTELDLKSLLP--EGFLSRTE-DKGMVVKSW 341 (451)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHCC----C-CEEEEEcCCccccccccchhhhCC--hHHHHhcc-CCcEEEEee
Confidence 456777888874 3456667777777652 2 233355421100000000000000 01111111 235777889
Q ss_pred CCCCCHHHHHHHhhcCCcE--EEecCCCCCCCHHHHHHHHcCCCEEEcCCCC----chhhh-ccCCceEEeCC-----CC
Q 001492 557 HKQYDVPEIYRLAAKTKGV--FINPALVEPFGLTLIEAAAHGLPMVATKNGG----PVDIH-RALNNGLLVDP-----HD 624 (1067)
Q Consensus 557 ~~~~dl~~ly~~A~~~~dV--~v~ps~~EgfgltllEAmA~G~PVVat~~Gg----~~eiv-~~~~~Gllv~p-----~d 624 (1067)
.|+.+ +++.+ +| ||. -+--++++||+++|+|+|+-...+ ....+ .....|+.++. -+
T Consensus 342 ~PQ~~---iL~H~----~v~~FvT----H~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~ 410 (451)
T PLN03004 342 APQVP---VLNHK----AVGGFVT----HCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGFVS 410 (451)
T ss_pred CCHHH---HhCCC----ccceEec----cCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCccC
Confidence 88775 56666 55 552 123358999999999999976433 23333 33467877752 27
Q ss_pred HHHHHHHHHHhhcCHH
Q 001492 625 QQAIADALLKLVSEKN 640 (1067)
Q Consensus 625 ~~~la~aL~~ll~d~~ 640 (1067)
.++++++|.++++++.
T Consensus 411 ~e~l~~av~~vm~~~~ 426 (451)
T PLN03004 411 STEVEKRVQEIIGECP 426 (451)
T ss_pred HHHHHHHHHHHhcCHH
Confidence 7999999999998754
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=82.93 E-value=1.7 Score=46.82 Aligned_cols=38 Identities=8% Similarity=0.211 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
+.+.++|..|+++| + .++++|+.+...+...+..+|+.
T Consensus 89 pGv~~~l~~L~~~~----i-~~avaS~s~~~~~~~~L~~~gl~ 126 (221)
T COG0637 89 PGVVELLEQLKARG----I-PLAVASSSPRRAAERVLARLGLL 126 (221)
T ss_pred ccHHHHHHHHHhcC----C-cEEEecCChHHHHHHHHHHccCh
Confidence 34556666666664 5 67777777766777777666653
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=82.92 E-value=3.1 Score=42.72 Aligned_cols=59 Identities=5% Similarity=0.124 Sum_probs=44.1
Q ss_pred eEEEEEEeCCCCCCCC-chhhHHHHHHHHHHHHhcCCCCceeEEEEECCC-------CHHHHHHHHHhcCCC
Q 001492 776 RLIVIALDCYDSKGAP-DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAM-------PVSETIEFLNSMKIE 839 (1067)
Q Consensus 776 klllia~DiDGTLl~~-~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR-------~~~~~~~~l~~l~i~ 839 (1067)
|.+++ |.|.||..+ +.+++++..+.++++++.+ +.- .|+|.|=- ....+..+-+.+|++
T Consensus 42 k~li~--DkDNTL~~~~~~~i~~~~~~~~~~l~~~~--~~~-~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp 108 (168)
T PF09419_consen 42 KALIF--DKDNTLTPPYEDEIPPEYAEWLNELKKQF--GKD-RVLIVSNSAGSSDDPDGERAEALEKALGIP 108 (168)
T ss_pred eEEEE--cCCCCCCCCCcCcCCHHHHHHHHHHHHHC--CCC-eEEEEECCCCcccCccHHHHHHHHHhhCCc
Confidence 55555 999998766 5679999999999999987 432 25555544 367788888888885
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=82.36 E-value=5.1 Score=48.23 Aligned_cols=39 Identities=13% Similarity=0.238 Sum_probs=31.4
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEE
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLI 1011 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVa 1011 (1067)
.|...+...+++++ ++++++ |||+.+ | +.+-+.+|..++
T Consensus 386 ~kP~~~~~al~~l~--~~~~v~-VGDs~~-D-i~aAk~AG~~~I 424 (459)
T PRK06698 386 NKSDLVKSILNKYD--IKEAAV-VGDRLS-D-INAAKDNGLIAI 424 (459)
T ss_pred CCcHHHHHHHHhcC--cceEEE-EeCCHH-H-HHHHHHCCCeEE
Confidence 46677888888765 578888 999999 9 999999997443
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=82.20 E-value=1.2 Score=47.62 Aligned_cols=45 Identities=16% Similarity=0.132 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCce-EEEeCCCc
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHK-TLIMKGVV 1016 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~-gVaMgNA~ 1016 (1067)
+..+++.++++++++++++++ |||+.+ | ++|.+.+|. +|.+..+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~i~-igD~~~-D-i~~a~~~g~~~i~v~~g~ 196 (226)
T PRK13222 151 DPAPLLLACEKLGLDPEEMLF-VGDSRN-D-IQAARAAGCPSVGVTYGY 196 (226)
T ss_pred ChHHHHHHHHHcCCChhheEE-ECCCHH-H-HHHHHHCCCcEEEECcCC
Confidence 578999999999999999999 999999 9 999999997 66666544
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=81.64 E-value=2.9 Score=44.86 Aligned_cols=43 Identities=14% Similarity=0.234 Sum_probs=34.1
Q ss_pred CCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEe
Q 001492 965 LLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIM 1012 (1067)
Q Consensus 965 ~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaM 1012 (1067)
.+.+|..+++.+++++|+ +++++ |||+.| | +.|.+.++..++.
T Consensus 152 ~~~~K~~~i~~~~~~~~~--~~~i~-iGDs~~-D-i~aa~~~~~~~~~ 194 (224)
T PLN02954 152 RSGGKAEAVQHIKKKHGY--KTMVM-IGDGAT-D-LEARKPGGADLFI 194 (224)
T ss_pred CCccHHHHHHHHHHHcCC--CceEE-EeCCHH-H-HHhhhcCCCCEEE
Confidence 345699999999999886 57888 999999 9 9998775555433
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=81.21 E-value=4.6 Score=40.98 Aligned_cols=57 Identities=4% Similarity=0.042 Sum_probs=48.4
Q ss_pred eEEEEEEeCCCCCCC-CchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 776 RLIVIALDCYDSKGA-PDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 776 klllia~DiDGTLl~-~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
|-+++ |+|.||.. .+...+++.++-+..+++.| + +++|.|-.+..-+..+...++++
T Consensus 29 kgvi~--DlDNTLv~wd~~~~tpe~~~W~~e~k~~g----i-~v~vvSNn~e~RV~~~~~~l~v~ 86 (175)
T COG2179 29 KGVIL--DLDNTLVPWDNPDATPELRAWLAELKEAG----I-KVVVVSNNKESRVARAAEKLGVP 86 (175)
T ss_pred cEEEE--eccCceecccCCCCCHHHHHHHHHHHhcC----C-EEEEEeCCCHHHHHhhhhhcCCc
Confidence 55555 99999654 34568899999999999998 8 89999999999999999998885
|
|
| >PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides | Back alignment and domain information |
|---|
Probab=80.08 E-value=16 Score=38.37 Aligned_cols=72 Identities=10% Similarity=0.108 Sum_probs=31.8
Q ss_pred CceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCC
Q 001492 305 WPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITST 384 (1067)
Q Consensus 305 ~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S 384 (1067)
+||++.......-......++..|+|+++.---+....+ ..|+..+.+ -+.+++..|.|++.|
T Consensus 95 ~P~~~i~~EtElWPnll~~a~~~~ip~~LvNarls~~s~---------------~~~~~~~~~--~r~~l~~f~~i~aqs 157 (186)
T PF04413_consen 95 RPDLLIWVETELWPNLLREAKRRGIPVVLVNARLSERSF---------------RRYRRFPFL--FRPLLSRFDRILAQS 157 (186)
T ss_dssp --SEEEEES----HHHHHH-----S-EEEEEE-----------------------------HH--HHHHGGG-SEEEESS
T ss_pred CCCEEEEEccccCHHHHHHHhhcCCCEEEEeeeeccccc---------------hhhhhhHHH--HHHHHHhCCEEEECC
Confidence 499888776544444445666779998764433211111 111111211 244588999999999
Q ss_pred HHHHHHHHh
Q 001492 385 KQEIDEQWG 393 (1067)
Q Consensus 385 ~~~~~~~~~ 393 (1067)
+...+.+..
T Consensus 158 ~~da~r~~~ 166 (186)
T PF04413_consen 158 EADAERFRK 166 (186)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 998887744
|
Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1067 | ||||
| 2r60_A | 499 | Structure Of Apo Sucrose Phosphate Synthase (Sps) O | 2e-45 | ||
| 3s28_A | 816 | The Crystal Structure Of Sucrose Synthase-1 In Comp | 2e-30 | ||
| 3s27_A | 816 | The Crystal Structure Of Sucrose Synthase-1 From Ar | 4e-29 | ||
| 3c4q_A | 426 | Structure Of The Retaining Glycosyltransferase Msha | 1e-07 | ||
| 3c48_A | 438 | Structure Of The Retaining Glycosyltransferase Msha | 2e-07 | ||
| 3l01_A | 428 | Crystal Structure Of Monomeric Glycogen Synthase Fr | 2e-05 | ||
| 3fro_A | 439 | Crystal Structure Of Pyrococcus Abyssi Glycogen Syn | 3e-05 | ||
| 2bis_A | 440 | Structure Of Glycogen Synthase From Pyrococcus Abys | 3e-05 |
| >pdb|2R60|A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii Length = 499 | Back alignment and structure |
|
| >pdb|3S28|A Chain A, The Crystal Structure Of Sucrose Synthase-1 In Complex With A Breakdown Product Of The Udp-Glucose Length = 816 | Back alignment and structure |
|
| >pdb|3S27|A Chain A, The Crystal Structure Of Sucrose Synthase-1 From Arabidopsis Thaliana And Its Functional Implications. Length = 816 | Back alignment and structure |
|
| >pdb|3C4Q|A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp Length = 426 | Back alignment and structure |
|
| >pdb|3C48|A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. Length = 438 | Back alignment and structure |
|
| >pdb|3L01|A Chain A, Crystal Structure Of Monomeric Glycogen Synthase From Pyrococcus Abyssi Length = 428 | Back alignment and structure |
|
| >pdb|3FRO|A Chain A, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase With Open And Closed Conformations Length = 439 | Back alignment and structure |
|
| >pdb|2BIS|A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi Length = 440 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1067 | |||
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 1e-169 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 1e-161 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 3e-94 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 8e-33 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 1e-32 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 3e-29 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 6e-26 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 2e-25 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 7e-24 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 1e-20 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 3e-16 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 6e-15 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 1e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-04 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 3e-07 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 7e-07 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 7e-04 |
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 505 bits (1302), Expect = e-169
Identities = 149/555 (26%), Positives = 231/555 (41%), Gaps = 80/555 (14%)
Query: 164 KKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSP 223
+ ++ ++ G + D GGQ+ YV E++ ALA M +VD+ +R++
Sbjct: 6 RIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMG--VQVDIITRRIKDE 63
Query: 224 EVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGA 283
GE E++ I+RIPFG DK+L KE LWPY+ E+V+
Sbjct: 64 NWPEFSGEIDY------------YQETNKVRIVRIPFGG-DKFLPKEELWPYLHEYVNKI 110
Query: 284 LAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKL 343
+ +P V+ HY D G + LL +P TGHSLG K+
Sbjct: 111 INFYREE------------GKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLGAQKM 158
Query: 344 EQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQW--GLYDGFDVK 401
E+L KE ++ +K RRI E L++ A+ +I ST QE Q+ LY G
Sbjct: 159 EKLNVNTSNFKE-MDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNV 217
Query: 402 LEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSP 461
+ + VIPPG++ +
Sbjct: 218 ED-----------------DDKFSVIPPGVNTRVFDGEYGD------------------- 241
Query: 462 KAIPAIWSDVMRFLTNP--HKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMG 519
K I + R L + P I+A SR D KKN L++A+ + + L++ ANL L +
Sbjct: 242 KIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLR 301
Query: 520 N----RDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGV 575
+D +L +++LID D G+V+ + Q ++ Y A V
Sbjct: 302 GIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSV 361
Query: 576 FINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKL 635
F + EPFGL +EA A GLP V T+NGGP +I G+LVDP D + IA LLK
Sbjct: 362 FALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKA 421
Query: 636 VSEKNLWVECRKNGWKNI-HLFSWPEHCRTYLTRVAACRMRHPQWQ-------TDTPVDE 687
+ W ++ G + + ++W E R YL + R + D +
Sbjct: 422 FESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRKDEEDEGGSLNIPDYFTNP 481
Query: 688 MAAEESSFNDSLKDV 702
A+ + D+ +
Sbjct: 482 GASNDEKLLDTFNKL 496
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 497 bits (1280), Expect = e-161
Identities = 148/639 (23%), Positives = 259/639 (40%), Gaps = 75/639 (11%)
Query: 87 HLTRKKKQLEWEELQRLANRRLEREQGRRDVTEDMSEDLSEG----------EKGDGVGE 136
H + K + E++Q L + + + E SE L E E+G G
Sbjct: 187 HSHQGKNLMLSEKIQNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERGWGDNA 246
Query: 137 IQTPDTPRKKFQR----NFSNLEVWSDDKKEKKLYIVLISLHGLVRGENMELGRDSDTGG 192
+ D R + LE + + +V++S HG +N+ LG DTGG
Sbjct: 247 ERVLDMIRLLLDLLEAPDPCTLETFLG-RVPMVFNVVILSPHGYFAQDNV-LGY-PDTGG 303
Query: 193 QIKYVVELARALARMPG----------VYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPED 242
Q+ Y+++ RAL R+ + +R + V + GE E +
Sbjct: 304 QVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLP-DAVGTTCGERLERVYDSE-- 360
Query: 243 DGIEVGESSGAYIIRIPFGP----RDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQI 298
I+R+PF K++ + +WPY++ + + A L +++
Sbjct: 361 ---------YCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVE-------LSKEL 404
Query: 299 GGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDIN 358
G P +I G+Y+D A+LL+ L V H+L + K + ++
Sbjct: 405 NG----KPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKY----PDSDIYWKKLD 456
Query: 359 STYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHG 418
Y + + +++ + +ITST QEI ++ R V+
Sbjct: 457 DKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFT-LPGLYRVVHGID 515
Query: 419 RYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNP 478
+ P+ ++ PG D S + + S I + + L +
Sbjct: 516 VFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEI-----EELLYSDVENKEHLCVLKDK 570
Query: 479 HKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITV 538
KP++ ++R D KN++ L++ +G+ LRELANL ++ G+R + + A + +
Sbjct: 571 KKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKA-EMKKM 629
Query: 539 LKLIDKYDLYGQVAY-PKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGL 597
LI++Y L GQ + + E+YR TKG F+ PAL E FGLT++EA GL
Sbjct: 630 YDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL 689
Query: 598 PMVATKNGGPVDIHRALNNGLLVDPHD----QQAIADALLKLVSEKNLWVECRKNGWKNI 653
P AT GGP +I +G +DP+ +AD K + + W E K G + I
Sbjct: 690 PTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRI 749
Query: 654 -HLFSWPEHCRTYLTRVAACRMRHPQWQTDTPVDEMAAE 691
++W + + LT + W+ + +D + A
Sbjct: 750 EEKYTWQIYSQRLLTLTG----VYGFWKHVSNLDRLEAR 784
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 306 bits (785), Expect = 3e-94
Identities = 100/522 (19%), Positives = 176/522 (33%), Gaps = 105/522 (20%)
Query: 162 KEKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVS 221
+ + + +IS+H ++ D+GG Y++ A LA+ VD+++R
Sbjct: 17 RGSHMRVAMISMHT----SPLQQPGTGDSGGMNVYILSTATELAKQG--IEVDIYTRATR 70
Query: 222 SPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVD 281
+ + + V E +I I GP + L KE L + F
Sbjct: 71 -----------------PSQGEIVRVAE--NLRVINIAAGPYE-GLSKEELPTQLAAFTG 110
Query: 282 GALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRN 341
G L+ + V +IH HY +G LL +P++ T H+L
Sbjct: 111 GMLSF------------TRREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAA- 157
Query: 342 KLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVK 401
+ S D + T + R E+ +D A+++ +T++E+ + Y
Sbjct: 158 --------VKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHY------ 203
Query: 402 LEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSP 461
R+ V+ PG D + SP
Sbjct: 204 ----------------DADPDRISVVSPGAD-----------------------VELYSP 224
Query: 462 KAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNR 521
A H ++ + R P K L+KA NL +I+
Sbjct: 225 GNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGG 284
Query: 522 DDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPAL 581
G + T + ++ + ++ + ++ +YR A + P+
Sbjct: 285 PS------GPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAA----DIVAVPSF 334
Query: 582 VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNL 641
E FGL +EA A G P++A + GG GLLVD H A ADAL L+ +
Sbjct: 335 NESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDDDET 394
Query: 642 WVECRKNGWKNIHLFSWPEHCRTYLT---RVAACRMRHPQWQ 680
+ ++ ++ FSW + A +
Sbjct: 395 RIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANENVDGETH 436
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 8e-33
Identities = 69/484 (14%), Positives = 149/484 (30%), Gaps = 139/484 (28%)
Query: 191 GGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGES 250
GG EL + LA G + + + G P + I E
Sbjct: 27 GGSGVVGTELGKQLAER-G-HEIHFIT-----------SGLPFRL---NKVYPNIYFHE- 69
Query: 251 SGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIH 310
+ + +Y PY L ++ + E ++H
Sbjct: 70 -----VTVNQYSVFQY------PPYD-----------LALASKMAEVAQRENLD---ILH 104
Query: 311 GHYADAGDSAALLSGAL---NVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRI 367
HYA A L+ + + +V T H DI
Sbjct: 105 VHYAIPHAICAYLAKQMIGERIKIVTTLHGT-----------------DITVLGSDPSLN 147
Query: 368 EGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVI 427
++ +++V + I+E ++ + +
Sbjct: 148 NLIRFGIEQSDVVTAVSHSLINE---THELVKPN--------------------KDIQTV 184
Query: 428 PPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALS 487
+D ++ T + + + +++ +S
Sbjct: 185 YNFIDERVYFKRDMTQLKK--------------------------EYGISESEKILIHIS 218
Query: 488 RPDPKKNITTLLKAFGECRPLRELANLTLIM-GN---RDDIEEMSSGNASVLITVLKLID 543
K + +++AF + + + L++ G+ I + L+ L + D
Sbjct: 219 NFRKVKRVQDVVQAFAK---IVTEVDAKLLLVGDGPEFCTILQ--------LVKNLHIED 267
Query: 544 KYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATK 603
+ G KQ +V E+ ++ + + + E FGL L+EA A G+P + T+
Sbjct: 268 RVLFLG--------KQDNVAELLAMSD----LMLLLSEKESFGLVLLEAMACGVPCIGTR 315
Query: 604 NGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIH-LFSWPEHC 662
GG ++ + + G L + D +AD ++L+ ++ L + ++++ F +
Sbjct: 316 VGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIV 375
Query: 663 RTYL 666
Y
Sbjct: 376 SQYE 379
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 1e-32
Identities = 60/472 (12%), Positives = 122/472 (25%), Gaps = 132/472 (27%)
Query: 191 GGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGES 250
GG + + +A +A G V ++++ G E+
Sbjct: 14 GGLQRDFMRIASTVAAR-GH-HVRVYTQS-----------------WEGDCPKAFEL--- 51
Query: 251 SGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIH 310
I++P + R E+ H +
Sbjct: 52 -----IQVPVKSHTNHGR-------NAEYYAWVQNHLKEHP--------------ADRVV 85
Query: 311 GHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGE 370
G G + V + S Y+ E
Sbjct: 86 GFNKMPGLDVYFAADVCYAEKVAQEKGFLYR---------------LTSRYRHYAAFERA 130
Query: 371 ELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPG 430
+ ++ T ++I + + + E+ ++PPG
Sbjct: 131 TFEQGKSTKLMMLTDKQIAD---FQKHYQTEPERF-------------------QILPPG 168
Query: 431 MDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDV-MRFLTNPHKPMILALSRP 489
+ D + IP + + ++L +
Sbjct: 169 IY-----------------------PDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSD 205
Query: 490 DPKKNITTLLKAFGECRPLRELANLTLIMG--NRDDIEEMSSGNASVLITVLKLIDKYDL 547
+K + ++A L ++G E L L +
Sbjct: 206 FGRKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEA--------LAEKLGVRSNVHF 257
Query: 548 YGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP 607
+ DV E+ A + ++PA E G+ L+EA GLP++ T G
Sbjct: 258 FSGRN--------DVSELMAAAD----LLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGY 305
Query: 608 VDIHRALNNGLLV-DPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSW 658
N G ++ +P Q+ + + L K +++ L + +N
Sbjct: 306 AHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDL 357
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 3e-29
Identities = 70/507 (13%), Positives = 135/507 (26%), Gaps = 152/507 (29%)
Query: 191 GGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGES 250
GG Y+ + + +F E A + EV
Sbjct: 19 GGIQSYLRDFIATQDPE----SIVVF--------ASTQNAEEAHAY---DKTLDYEV--- 60
Query: 251 SGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIH 310
IR P L + E + +
Sbjct: 61 -----IRWPRSVM---LPTPTTAHAMAEIIRE---------------------REIDNVW 91
Query: 311 GHYA-DAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEG 369
A A A ++ + H + + +R+I
Sbjct: 92 FGAAAPLALMAGTAKQAGASKVIASTHGHEVGWSMLPG------------SRQSLRKI-- 137
Query: 370 EELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPP 429
+++ ++ R + P +P
Sbjct: 138 ----GTEVDVLTYISQYT-------------------LRRFKS----AFGSHPTFEHLPS 170
Query: 430 GMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRP 489
G+D +P + + P+I SR
Sbjct: 171 GVD-----------------------VKRFTPATPEDKSATRKKLGFTDTTPVIACNSRL 207
Query: 490 DPKKNITTLLKAFGECRPLRELANLTLIMGN---RDDIEEMSSGNASVLITVLKLIDKYD 546
P+K +L+KA + R A L LI+G+ + +++ +
Sbjct: 208 VPRKGQDSLIKAMPQVIAARPDAQL-LIVGSGRYESTLRRLATD----------VSQNVK 256
Query: 547 LYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPAL-------VEPFGLTLIEAAAHGLPM 599
G++ Y D+ A +F PA VE G+ +EA A G+P+
Sbjct: 257 FLGRLEYQ------DMINTLAAAD----IFAMPARTRGGGLDVEGLGIVYLEAQACGVPV 306
Query: 600 VATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIH-LFSW 658
+A +GG + GL+V+ D +++ L++L+ + G ++ +SW
Sbjct: 307 IAGTSGGAPETVTP-ATGLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSW 365
Query: 659 P-------EHCRTYLTRVAACRMRHPQ 678
++ ++AA H
Sbjct: 366 EIMGERLTNILQSEPRKLAAALEHHHH 392
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 6e-26
Identities = 58/363 (15%), Positives = 110/363 (30%), Gaps = 87/363 (23%)
Query: 308 VIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRI 367
+ H P + H D++S +
Sbjct: 129 YVLVHDPQPAALIEFY--EKKSPWLWRCH------------------IDLSSPNREFWEF 168
Query: 368 EGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVI 427
++ + I + + ++ K V++
Sbjct: 169 L--RRFVEKYDRYIFHLPEYVQP--------ELDRNKA-------------------VIM 199
Query: 428 PPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALS 487
PP +D + E + RF +P KP+I +S
Sbjct: 200 PPSIDPLSEKNVELKQTEILRILE---------------------RFDVDPEKPIITQVS 238
Query: 488 RPDPKKNITTLLKAFGECRPLRELANLTLIM---GNRDDIEEMSSGNASVLITVLKLIDK 544
R DP K I +++ + + + ++ + L++ DD E G T+ K+ +
Sbjct: 239 RFDPWKGIFDVIEIYRKVK--EKIPGVQLLLVGVMAHDDPE----GWIYFEKTLRKIGED 292
Query: 545 YDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKN 604
YD+ H + +V R + V + ++ E FGLT+ EA G P++
Sbjct: 293 YDVKVLTNLIGVHAR-EVNAFQRASD----VILQMSIREGFGLTVTEAMWKGKPVIGRAV 347
Query: 605 GGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIH-LFSWPEHCR 663
GG G LV + + +L L+ + E + + F +H
Sbjct: 348 GGIKFQIVDGETGFLVRDAN--EAVEVVLYLLKHPEVSKEMGAKAKERVRKNFIITKHME 405
Query: 664 TYL 666
YL
Sbjct: 406 RYL 408
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 2e-25
Identities = 82/474 (17%), Positives = 129/474 (27%), Gaps = 143/474 (30%)
Query: 191 GGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGES 250
GG +V++LA L G V + + + + V
Sbjct: 35 GGVQSHVLQLAEVLRDA-GH-EVSVLAPA-----------------SPHVKLPDYVV--- 72
Query: 251 SGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIH 310
SG + IP+ LR + + + I G V+H
Sbjct: 73 SGGKAVPIPYNGSVARLR-----------------FGPATHRKVKKWIAEGDFD---VLH 112
Query: 311 GHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGE 370
H +A + L A P+V T H+ L T + + I
Sbjct: 113 IHEPNAPSLSMLALQAAEGPIVATFHTSTTKSL----------------TLSVFQGIL-R 155
Query: 371 ELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPG 430
+ S + R V IP G
Sbjct: 156 PYHEKIIGRIAVSD--------------------LARRWQME------ALGSDAVEIPNG 189
Query: 431 MD---FSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALS 487
+D F++ + P +L L
Sbjct: 190 VDVASFADAPLLDGYP----------------------------------REGRTVLFLG 215
Query: 488 RPD-PKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYD 546
R D P+K + LL A + + LI+G D+ E L
Sbjct: 216 RYDEPRKGMAVLLAALPKLVARFPDVEI-LIVGRGDEDEL--------REQAGDLAGHLR 266
Query: 547 LYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPAL-VEPFGLTLIEAAAHGLPMVATKNG 605
GQV R A V+ P L E FG+ L+EA A G +VA+
Sbjct: 267 FLGQVDDA------TKASAMRSAD----VYCAPHLGGESFGIVLVEAMAAGTAVVASDLD 316
Query: 606 GPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWP 659
+ + G LV D +A AL+ ++ + L + +H + W
Sbjct: 317 AFRRVLADGDAGRLVPVDDADGMAAALIGILEDDQLRAGYVARASERVHRYDWS 370
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 98.4 bits (246), Expect = 7e-24
Identities = 28/183 (15%), Positives = 65/183 (35%), Gaps = 30/183 (16%)
Query: 481 PMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGN---RDDIEEMSSGNASVLI 536
I + R +KN + L+KA + ++ L + G I+
Sbjct: 3 FKIAMVGRYSNEKNQSVLIKAVAL---SKYKQDIVLLLKGKGPDEKKIK----------- 48
Query: 537 TVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHG 596
L K + + + + ++ EI + ++++ A VE + +EA + G
Sbjct: 49 ---LLAQKLGVKAEFGFVNSN---ELLEILKTCT----LYVHAANVESEAIACLEAISVG 98
Query: 597 LPMV-ATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHL 655
+ V A AL+ L +P++ + ++ + + K + K+
Sbjct: 99 IVPVIANSPLSATRQF-ALDERSLFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSALN 157
Query: 656 FSW 658
++
Sbjct: 158 YTL 160
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 | Back alignment and structure |
|---|
Score = 89.5 bits (223), Expect = 1e-20
Identities = 42/190 (22%), Positives = 74/190 (38%), Gaps = 28/190 (14%)
Query: 470 DVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIM-GNRDDIEEMS 528
+ +F + L+++R P+K I L+ F ++L + L + G +
Sbjct: 13 ETSKFKFKCYGDFWLSVNRIYPEKRIELQLEVF------KKLQDEKLYIVGWFSKGDHAE 66
Query: 529 SGNASVLITVLKLI--DKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFG 586
+ I D G V+ ++ ++Y K + A E FG
Sbjct: 67 R-----YARKIMKIAPDNVKFLGSVSEE------ELIDLYS-RCK---GLLCTAKDEDFG 111
Query: 587 LTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECR 646
LT IEA A G P++A GG + G LV+ D I DA+ K+ + + +
Sbjct: 112 LTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNA-DVNEIIDAMKKVSKNPDKF---K 167
Query: 647 KNGWKNIHLF 656
K+ ++ F
Sbjct: 168 KDCFRRAKEF 177
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 81.4 bits (200), Expect = 3e-16
Identities = 26/199 (13%), Positives = 71/199 (35%), Gaps = 24/199 (12%)
Query: 465 PAIWSDVMRFLTNPH--KPMILALSRPD-PKKNITTLLKAFGECRPLRELANLTLIMGNR 521
P I + + ++ + + +IL RP + T +++A + +N I+
Sbjct: 224 PKINTTLKNYINDKRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVG 283
Query: 522 DDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPAL 581
+ +++ L + G++ D ++ + ++ + I+ +
Sbjct: 284 EKHKDI----------ALGKGIHLNSLGKLT------LEDYADLLKRSS----IGISLMI 323
Query: 582 VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNL 641
+E A GL ++ D+ +N + ++ + + IA+ L++L N
Sbjct: 324 SPHPSYPPLEMAHFGLRVITN-KYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFNN 382
Query: 642 WVECRKNGWKNIHLFSWPE 660
+K + +
Sbjct: 383 RDVDKKESSNMMFYINEFN 401
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 77.2 bits (189), Expect = 6e-15
Identities = 27/211 (12%), Positives = 61/211 (28%), Gaps = 26/211 (12%)
Query: 468 WSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEM 527
++ + L ++R +K + + A A + + + + +
Sbjct: 172 ARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFD 231
Query: 528 SSGNASVLITVLKLIDKYDLYGQVAYPKHH-KQYDVPEIYRLAAKTKGVFINPALVEPFG 586
A + + + + ++ + V +Y V +N + E FG
Sbjct: 232 LHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACD----VIVNCSSGEGFG 287
Query: 587 LTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPH------------------DQQAI 628
L E A G P++ + GG D + + P D +
Sbjct: 288 LCSAEGAVLGKPLIISAVGGADDYFSG-DCVYKIKPSAWISVDDRDGIGGIEGIIDVDDL 346
Query: 629 ADALLKLVSEKNLWVECRKNGWKNIH-LFSW 658
+A ++ E K + +W
Sbjct: 347 VEA-FTFFKDEKNRKEYGKRVQDFVKTKPTW 376
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* Length = 244 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 1e-07
Identities = 45/243 (18%), Positives = 89/243 (36%), Gaps = 45/243 (18%)
Query: 774 RRRLIVIALDCYDSKG--APDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIE 831
R+ L++ LD D++ ++ + + R + A TG + +A + + +
Sbjct: 2 RQLLLISDLD-----NTWVGDQQALEHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVG 56
Query: 832 FLNSMKIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIW 891
E D + + G E+Y+P D +A ++ W D
Sbjct: 57 L--------MEPDYWLTAVGSEIYHPEG---------LDQHWADYLSEHWQRD------- 92
Query: 892 KLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDLRQKLRMRGLRCHP 951
L +G E K S Q K ISY + + ID L + L+ G+
Sbjct: 93 ILQAIADGFEALKPQSPLEQNPWK------ISYHLDPQACPTVIDQLTEMLKETGIPVQV 146
Query: 952 MYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDT--DYEELISGAHKT 1009
++ + ++P +++ A +YL + + V GD+ D L + +
Sbjct: 147 IFSSGKD-VDLLPQRSNKGNATQYLQQHLAMEPSQTLVC----GDSGNDI-GLFETSARG 200
Query: 1010 LIM 1012
+I+
Sbjct: 201 VIV 203
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.5 bits (130), Expect = 2e-07
Identities = 100/731 (13%), Positives = 199/731 (27%), Gaps = 259/731 (35%)
Query: 187 DSDTGGQIKY-----VVELARALARMPGVYRVDLFSRQV-SSPEVDWSYGEPAEMLTGGP 240
D +TG + +Y + A V + + S E+D +
Sbjct: 8 DFETG-EHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAV----- 61
Query: 241 EDDGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLN----MSKVLGE 296
SG + K ++E+ +Q+FV+ L +N MS + E
Sbjct: 62 ----------SGTLRLFWTL--LSK--QEEM----VQKFVEEVLR--INYKFLMSPIKTE 101
Query: 297 QIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGR----NKLEQLLKQGRQ 352
Q QP ++ D N V +++ R KL Q L + R
Sbjct: 102 QR---QPSMMTRMYIEQRDR---------LYNDNQVFAKYNVSRLQPYLKLRQALLELRP 149
Query: 353 SKE----------------DINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYD 396
+K D+ +YK+ +++ + L+ S + ++ L
Sbjct: 150 AKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKN--CNSPETVLEMLQKLL- 206
Query: 397 GFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGT 456
+++ +R+ N I + EL L
Sbjct: 207 ---YQIDPNWTSRSDHSSN-----------IK-----------LRIHSIQAELRRL---- 237
Query: 457 DGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNI--TTLLKAFG-ECRPL---RE 510
+ P++ +L L N+ AF C+ L R
Sbjct: 238 -----------------LKSKPYENCLLVL---L---NVQNAKAWNAFNLSCKILLTTRF 274
Query: 511 LANLTLIMGNRD---DIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYR 567
+ ++ S L + L + + D+P
Sbjct: 275 KQVTDFLSAATTTHISLDHHSMT--------LTPDEVKSLLLKYL---DCRPQDLPR--- 320
Query: 568 LAAKTKGVFINPALVEPFGLTLIEAAAH--GLPMVATKNGGPVDIHRALNNGLLV-DPHD 624
T NP + ++ + A V + + + L V +P +
Sbjct: 321 -EVLT----TNPRRLSIIAESIRDGLATWDNWKHVNCDK-----LTTIIESSLNVLEPAE 370
Query: 625 QQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRMRHPQWQTDTP 684
+ + D L V + + P L+ + W
Sbjct: 371 YRKMFDRL--SVFPPSAHI---------------PTIL---LSLI---------WFDVIK 401
Query: 685 VDEMAAEESSFNDSL--KDVQDMSLRLSVDGDKSSLNGSLDYTAASSGDPVQDQVKRVLS 742
D M SL K ++ ++ + + L+
Sbjct: 402 SDVMVVVNKLHKYSLVEKQPKESTISI--------PSIYLELK----------------- 436
Query: 743 KIKKPDSDSNDKEAEKKLLENVVSKYPMLRRRRRLIVIALDCYDSKGAPDKKMIQ----- 797
K + N+ + +++ Y + + +DS + Q
Sbjct: 437 --VKLE---NEYALHRSIVD----HYNIPK-----------TFDSDDLIPPYLDQYFYSH 476
Query: 798 IMY-----------DVFKAVRLD----HQTARVTGFALSTAMPVSETIEFLNSMK--IEA 840
I + +F+ V LD Q R A + + + T++ L K I
Sbjct: 477 IGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICD 536
Query: 841 NE--FDALICS 849
N+ ++ L+ +
Sbjct: 537 NDPKYERLVNA 547
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.6 bits (120), Expect = 3e-06
Identities = 67/460 (14%), Positives = 122/460 (26%), Gaps = 172/460 (37%)
Query: 676 HPQWQTDTPVDEMAAEESSFNDSLKDVQDMSLRLSVDGDKSSLNGSLDYTAASSGDPVQD 735
H D E + + D L +D + + D VQD
Sbjct: 2 HHHHHMDFETGEH---QYQYKDILSVFEDAFVD---NFDCKD---------------VQD 40
Query: 736 QVKRVLSKIKKPDSDSNDKEAEKKLLENVVSKYPMLRRRRRLIVIALDCYDSKGAPDKKM 795
K +LSK +E +++++ + RL SK
Sbjct: 41 MPKSILSK----------EE-----IDHIIMSKDAVSGTLRLF----WTLLSKQEE---- 77
Query: 796 IQIMYDVF--KAVRLDHQTARVTGFALSTAMPVSETIEFL-NSMKIEANEFDALICSSGG 852
M F + +R+++ +FL + +K E + S
Sbjct: 78 ---MVQKFVEEVLRINY--------------------KFLMSPIKTEQRQ------PSMM 108
Query: 853 EMYYPGTYTEEGGKLFPDPD-YASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQ 911
Y E+ +L+ D +A + R + KL +
Sbjct: 109 TR----MYIEQRDRLYNDNQVFAKYNVSR------LQPYLKLRQA-------------LL 145
Query: 912 EDQ--------------KSS--NAHCISYLIKDP----------SKARRIDDLRQKLRMR 945
E + K+ C+SY ++ + + + L+
Sbjct: 146 ELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKL 205
Query: 946 GLRCHPMYCRNSTRMQIVPL-LASRSQALRYLFVR-------------WRLNVANMF--- 988
+ P + S + L + S LR L N F
Sbjct: 206 LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS 265
Query: 989 ----VILGESGDTDYEELISGAHKTLIM--KGVVEKGSEELL-RTTNLRDDIVPSE---- 1037
+ TD+ + H +L + + LL + + R +P E
Sbjct: 266 CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT 325
Query: 1038 SPL----IA--------------HVNANAKVDEIANALRQ 1059
+P IA HVN + I ++L
Sbjct: 326 NPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV 365
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.7 bits (115), Expect = 1e-05
Identities = 98/641 (15%), Positives = 181/641 (28%), Gaps = 215/641 (33%)
Query: 467 IWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLI-MGNRDDIE 525
+++D F + +SR P + L LR N+ + +
Sbjct: 119 LYNDNQVF--AKYN-----VSRLQPYLKLRQALLE------LRPAKNVLIDGVL------ 159
Query: 526 EMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVF-INPALVEP 584
SG + + L + Y + Q +F +N
Sbjct: 160 --GSGK-TWV--ALDVCLSYKV--QCKMDF------------------KIFWLNLKNCNS 194
Query: 585 FGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEK----- 639
L L N + ++ +I L +L+ K
Sbjct: 195 PETVLEMLQK--LLYQIDPN------WTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC 246
Query: 640 -----NLWVECRKNGWK--NIHLFSWPEHCRTYLT--------RVAACRMRHPQWQTDTP 684
N+ W N+ C+ LT ++A H
Sbjct: 247 LLVLLNVQ---NAKAWNAFNLS-------CKILLTTRFKQVTDFLSAATTTHI------S 290
Query: 685 VDEMAAEESSFNDSLKDVQDMSLRLS-VDGDKSSLNGSLDYTAASSGDPVQDQVKRVLSK 743
+D + +L + SL L +D L + +P R LS
Sbjct: 291 LDHH-------SMTLTPDEVKSLLLKYLDCRPQDLP-----REVLTTNP------RRLSI 332
Query: 744 IKKPDSDSNDKEAEKKLLENVVSKYPMLRRRRRLIVIALDCYDSKGAPDKKMIQIMYD-- 801
I + D +N K+ + +I +L+ + P + + M+D
Sbjct: 333 IAESIRDGLAT------WDN--WKHVNCDKLTTIIESSLNVLE----PAE--YRKMFDRL 378
Query: 802 -VF-KAVRLDHQTARVTGFALSTAMPVSETIEFLNSMK----IEANEFDALICSSGGEMY 855
VF + + + + + S+ + +N + +E ++ I
Sbjct: 379 SVFPPSAHIPTILLSL----IWFDVIKSDVMVVVNKLHKYSLVEKQPKESTI-------S 427
Query: 856 YPGTYTEEGGKLFPDPDYASH---ID-YRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQ 911
P Y E KL + +YA H +D Y + KT + P
Sbjct: 428 IPSIYLELKVKL--ENEYALHRSIVDHYN-----IPKTF------------DSDDLIPPY 468
Query: 912 EDQKSSNAHCISYLIKDPSKARRID-------DLR---QKLRMRGLRCHPMYCRNSTRMQ 961
DQ + H I + +K+ R+ D R QK+R +
Sbjct: 469 LDQYFYS-H-IGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAW-------NASGS 519
Query: 962 IVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSE 1021
I+ L Y+ D YE L++ I+ + K E
Sbjct: 520 ILNTLQQLKFYKPYICDN----------------DPKYERLVN-----AILD-FLPKIEE 557
Query: 1022 ELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVGK 1062
L+ + D++ IA + + + A +QV +
Sbjct: 558 NLICSKYT--DLLR-----IALMAEDEAI--FEEAHKQVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 4e-04
Identities = 96/597 (16%), Positives = 168/597 (28%), Gaps = 140/597 (23%)
Query: 33 LADRGHFNPTKYFVEEVVTSVDETDLYRTWIKVVATRNTRERSSRLENMCWRIWHLTRKK 92
L + + FVEEV + Y+ ++ R+ S M R++ R +
Sbjct: 71 LLSKQE-EMVQKFVEEV----LRIN-YK-FLMSPIKTEQRQPS-----MMTRMYIEQRDR 118
Query: 93 KQLEWEELQRLANRRLEREQGRRDVTEDMSEDLSE------GEKGDG----VGEIQTPDT 142
+ + Q A + R Q + + + E G G G ++
Sbjct: 119 L---YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSY- 174
Query: 143 PRKKFQRNFSNLEVWSDDKKEKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVE--- 199
K Q W + K VL L L+ + SD IK +
Sbjct: 175 ---KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQ 231
Query: 200 --LARALARMPGVYRVDLFS-RQVSSPEVDW-SYGEPAEML-TGGPEDDGIEVGESSGAY 254
L R L P Y L V + + W ++ ++L T +
Sbjct: 232 AELRRLLKSKP--YENCLLVLLNVQNAKA-WNAFNLSCKILLT------------TRFKQ 276
Query: 255 IIRIPFGPRDKYLR-KELLWPYIQEFVDGALAHCLNMS-KVLGEQIGGGQPVWPYVIHGH 312
+ ++ + V L L+ + L ++ P +I
Sbjct: 277 VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSII--- 333
Query: 313 YADAGDSAALLSGAL----NVPMVLTGHSLGRNKLEQLLKQG---------RQS------ 353
A + L N V +KL +++ R+
Sbjct: 334 -------AESIRDGLATWDNWKHV------NCDKLTTIIESSLNVLEPAEYRKMFDRLSV 380
Query: 354 -KEDINSTYKIMRRI----EGEELSLDAAELVITS--TKQEIDEQWGLYDGFDVKLEKVL 406
+ ++ I ++ + +L S KQ + + + K+
Sbjct: 381 FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLE 440
Query: 407 RARA--RRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIG-----GTDGS 459
A R V+ Y IP D +++ P +D S IG
Sbjct: 441 NEYALHRSIVD---HYN-----IPKTFDSDDLIP----PYLDQYFYSHIGHHLKNIEHPE 488
Query: 460 SPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGE--CR--PLRELANLT 515
++ D RFL + A + N LK + C P E
Sbjct: 489 RMTLFRMVFLD-FRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYER---- 543
Query: 516 LIMGNRDDIEEMSSGNASVLITVLKLIDKY-DLYGQVAYPKHHKQYDVPEIYRLAAK 571
L+ + I + LI KY DL ++A + I+ A K
Sbjct: 544 LV----NAILDFLPKIEENLI-----CSKYTDLL-RIAL-----MAEDEAIFEEAHK 585
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 | Back alignment and structure |
|---|
Score = 53.7 bits (128), Expect = 3e-07
Identities = 31/180 (17%), Positives = 58/180 (32%), Gaps = 17/180 (9%)
Query: 563 PEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG-------PVDIHRALN 615
Y + + + P+ EP+G T E G+P + T G ++ ++A +
Sbjct: 509 GLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKD 568
Query: 616 NGLLVDPHDQ-------QAIADALLKLVSEKNLWV-ECRKNGWKNIHLFSWPEHCRTYLT 667
G+ + + + D + + V + R L W Y+
Sbjct: 569 YGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVK 628
Query: 668 -RVAACRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMSLRLSVDGDKSSLNGSLDYTA 726
R A R +P Q V E + + + ++ LSV G L +
Sbjct: 629 ARQLALRRGYP-DQFRELVGEELNDSNMDALAGGKKLKVARPLSVPGSPRDLRSNSTVYM 687
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 | Back alignment and structure |
|---|
Score = 51.7 bits (124), Expect = 7e-07
Identities = 27/190 (14%), Positives = 52/190 (27%), Gaps = 21/190 (11%)
Query: 478 PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIM-GNRDDIEEMSSGNASVLI 536
+ +L + R P K L++ G + E
Sbjct: 160 AKEDFLLFMGRVSPHKGALEAAAFA-------HACGRRLVLAGPAWEPEYFDE------- 205
Query: 537 TVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHG 596
+ + G+V + ++ EP + EAA G
Sbjct: 206 ITRRYGSTVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSG 265
Query: 597 LPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLF 656
P+V T NG +I + + V + D + ++ E R+ + L+
Sbjct: 266 TPVVGTGNGCLAEI---VPSVGEVVGYGTDFAPDEARRTLAGLPASDEVRR---AAVRLW 319
Query: 657 SWPEHCRTYL 666
Y+
Sbjct: 320 GHVTIAERYV 329
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} Length = 289 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 7e-04
Identities = 23/188 (12%), Positives = 60/188 (31%), Gaps = 24/188 (12%)
Query: 818 FALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHI 877
T + ++ + K + G E+ Y E D + S I
Sbjct: 64 IGWVTGSSIESILDKMGRGKFRYFP-HFIASDLGTEITY----FSEHNFGQQDNKWNSRI 118
Query: 878 DYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDD 937
+ + K+ + KL+ N + + + ++ ++ + +
Sbjct: 119 NEGF----SKEKVEKLVKQLHENHNILLNPQTQLGK----SRYKHNFYYQEQDEINDKKN 170
Query: 938 L--------RQKLRMRGLRCHPMYCRNSTR--MQIVPLLASRSQALRYLFVRWRLNVANM 987
L + + RC+P+ + +P+ +++ + ++ ++ LN
Sbjct: 171 LLAIEKICEEYGVSVNINRCNPLAGDPEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERA 230
Query: 988 FVILGESG 995
G+SG
Sbjct: 231 IAF-GDSG 237
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1067 | ||||
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 6e-23 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 1e-22 | |
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 3e-17 | |
| d2iw1a1 | 370 | c.87.1.8 (A:2-371) Lipopolysaccharide core biosynt | 2e-07 | |
| d2bfwa1 | 196 | c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Py | 3e-04 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 101 bits (251), Expect = 6e-23
Identities = 88/508 (17%), Positives = 151/508 (29%), Gaps = 85/508 (16%)
Query: 190 TGGQIKYVVELARALAR--------MPGVYRV-DLFSRQVSSPEVDWSYGEPAEMLTGGP 240
TGG V L AL +PG V + V E GE A++L
Sbjct: 16 TGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEV-- 73
Query: 241 EDDGIEVGESSGAYIIRIP--FGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQI 298
+ + +++ I+ P + + Y + A G
Sbjct: 74 QHERLDL------LILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLP 127
Query: 299 GGGQPVWPYVIHGHYADAGDSAALL--SGALNVPMVLTGHS------LGRNKLEQLLKQG 350
G P ++H H A + + + +P +LT H+ G N +L
Sbjct: 128 GWR----PDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPA 183
Query: 351 RQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARA 410
+ Y + ++G + A V S +EI L F + LE V+ +R
Sbjct: 184 HAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEI-----LTAEFGMGLEGVIGSR- 237
Query: 411 RRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSD 470
+ I G+D D L +A+
Sbjct: 238 ----------AHVLHGIVNGIDADVWNPATDH------LIHDNYSAANLKNRALNKKAVA 281
Query: 471 VMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSG 530
+ + P+ +SR +K I + +A E L ++ +E
Sbjct: 282 EHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIV--SLGGRLVVLGAGDVALEGA--- 336
Query: 531 NASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLI 590
L +G+V + + + I P+ EP GLT +
Sbjct: 337 ---------LLAAASRHHGRVGVAIGYNEPLSHLMQAGCD----AIIIPSRFEPCGLTQL 383
Query: 591 EAAAHGLPMVATKNGGPVDI---------HRALNNGLLVDPHDQQAIADAL---LKLVSE 638
A +G V + GG D G+ P + A+ ++ +
Sbjct: 384 YALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHD 443
Query: 639 KNLWVECRKNGWKNIHLFSWPEHCRTYL 666
LW + +K G K SW + Y
Sbjct: 444 PKLWTQMQKLGMK--SDVSWEKSAGLYA 469
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 99.9 bits (247), Expect = 1e-22
Identities = 89/478 (18%), Positives = 159/478 (33%), Gaps = 71/478 (14%)
Query: 190 TGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGE 249
GG + + ++ ALA + G + V +F+ + + + G + E
Sbjct: 15 VGGLAEALTAISEALASL-G-HEVLVFTPSHGRFQGEEIGKIR---VFGEEVQVKVSYEE 69
Query: 250 SSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVI 309
I RI G D +++ P + A+ +L + + + P V+
Sbjct: 70 RGNLRIYRIGGGLLD---SEDVYGPGWDGLIRKAVTFGRASVLLLNDLLR--EEPLPDVV 124
Query: 310 HGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEG 369
H H + AL+ +P V T H L ++KL E S I+
Sbjct: 125 HFHDWHTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFH-----EAGLSELAPYPDIDP 179
Query: 370 EELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPP 429
E A++V T ++ + ++WG + F+ ++ +
Sbjct: 180 EHTGGYIADIVTTVSRGYLIDEWGFFRNFE----------------------GKITYVFN 217
Query: 430 GMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRP 489
G+D S T D S + +F + +
Sbjct: 218 GIDCSFWNESYLTGSRD------------------ERKKSLLSKFGMDEGVTFMFIGRFD 259
Query: 490 DPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYG 549
+K + LLKA +E + I+ + D E + +G
Sbjct: 260 RGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEG-----------WARSLEEKHG 308
Query: 550 QVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVD 609
V + + I P+ EPFGL +EA G +A+ GG D
Sbjct: 309 NVKVITEMLSREFVRELYGSVD---FVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRD 365
Query: 610 IHRALNNGLLVDPHDQQAIADALLKLVSE-KNLWVECRKNGWKNIHLFSWPEHCRTYL 666
I G+LV D +A+A+LK + ++ + R+N K FSW + Y+
Sbjct: 366 IITN-ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYV 422
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 83.4 bits (205), Expect = 3e-17
Identities = 37/274 (13%), Positives = 87/274 (31%), Gaps = 38/274 (13%)
Query: 406 LRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIP 465
+ R+ + G+ R V P G++ + Q P P +
Sbjct: 203 VTTRSAKSHTAWGKAF-RTEVYPIGIEPKEIAKQAAGPL----------------PPKLA 245
Query: 466 AIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIM-----GN 520
+ ++ + I ++ R D K + A+ + + +
Sbjct: 246 QLKAE------LKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTS 299
Query: 521 RDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPA 580
R D++ + ++ KY G ++ +D + ++ + V +
Sbjct: 300 RGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYS-DVGLVTP 358
Query: 581 LVEPFGLTLIEAAAHGLP-----MVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKL 635
L + L E A P +V ++ G + L + L+V+P+D+ +A AL +
Sbjct: 359 LRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANE---LTSALIVNPYDRDEVAAALDRA 415
Query: 636 VSE-KNLWVECRKNGWKNIHLFSWPEHCRTYLTR 668
++ + I +++
Sbjct: 416 LTMSLAERISRHAEMLDVIVKNDINHWQECFISD 449
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Length = 370 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Score = 52.6 bits (124), Expect = 2e-07
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 595 HGLPMVATKNGGPVDIHRALNNGLLV-DPHDQQAIADALLKLVSEKNLWVECRKNGWKNI 653
GLP++ T G N G ++ +P Q+ + + L K +++ L + +N
Sbjct: 292 AGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYA 351
Query: 654 ---HLFSWPEHCRTYLT 667
L+S PE +T
Sbjct: 352 DTQDLYSLPEKAADIIT 368
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 196 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 40.9 bits (94), Expect = 3e-04
Identities = 32/182 (17%), Positives = 55/182 (30%), Gaps = 17/182 (9%)
Query: 478 PHKPMILALSRPD-PKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLI 536
+ + R D +K + LLKA +E + I+ + D E +
Sbjct: 30 DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEK 89
Query: 537 TVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHG 596
+ L + + V G
Sbjct: 90 HGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMC--------------LG 135
Query: 597 LPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSE-KNLWVECRKNGWKNIHL 655
+A+ GG DI G+LV D +A+A+LK + ++ + R+N K
Sbjct: 136 AIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS 194
Query: 656 FS 657
FS
Sbjct: 195 FS 196
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1067 | |||
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 100.0 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 100.0 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 100.0 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 100.0 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.98 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.98 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.98 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.96 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.95 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.95 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.94 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.92 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.91 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 99.89 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.88 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 99.88 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 99.84 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 99.54 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 99.51 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.46 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.38 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 99.37 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.19 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 99.08 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 99.04 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 99.02 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.86 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.86 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 98.79 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 98.78 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 98.74 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 98.73 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 98.66 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 98.62 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 98.56 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 98.44 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 98.17 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 98.0 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 97.61 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 97.35 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 96.81 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 96.76 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 96.24 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 96.24 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 96.18 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 95.76 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 95.73 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 94.22 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 94.07 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 94.02 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 93.39 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 92.78 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 91.24 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 90.08 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 88.89 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 88.4 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 88.16 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 85.99 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 84.25 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 83.91 |
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=0 Score=340.41 Aligned_cols=426 Identities=22% Similarity=0.262 Sum_probs=288.7
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 399999413443468767889888-7748899999999998099903899982488999878767876311479999898
Q 001492 166 LYIVLISLHGLVRGENMELGRDSD-TGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDG 244 (1067)
Q Consensus 166 l~I~lis~~~~~~~~~~~~g~~~d-~GG~~~~v~~LA~aLa~~G~v~~V~viT~~~~~~~v~~~y~~~~e~l~~~~~~~~ 244 (1067)
|||++|+..+. |. +||+++++..|+++|+++| |+|+|+|+.......+. -........ .....
T Consensus 1 MkIl~~~~~~p-----------P~~~GG~~~~~~~La~~L~~~G--h~V~Vvtp~~~~~~~~~--~~~~~~~~~-~~~~~ 64 (437)
T d2bisa1 1 MKVLLLGFEFL-----------PVKVGGLAEALTAISEALASLG--HEVLVFTPSHGRFQGEE--IGKIRVFGE-EVQVK 64 (437)
T ss_dssp CEEEEECSCCT-----------TCCSSSHHHHHHHHHHHHHHTT--CEEEEEEECTTSSCCEE--EEEEECSSS-EEEEE
T ss_pred CEEEEECCCCC-----------CCCCCCHHHHHHHHHHHHHHCC--CEEEEEECCCCCCCHHH--CCCEEECCC-CCCEE
T ss_conf 98799877458-----------8455879999999999999769--98999905898655444--154022154-42011
Q ss_pred CCCCCCCCEEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHH
Q ss_conf 54456688099963678876675534-66520677899999999997489886625999998549998698236999999
Q 001492 245 IEVGESSGAYIIRIPFGPRDKYLRKE-LLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALL 323 (1067)
Q Consensus 245 ~~~~~~~gv~i~rip~~~~~~~l~k~-~l~~~l~~f~~~~l~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~a~~l 323 (1067)
.......++.++++..+. +... ..++...................+...... ...|||||+|++.++.++.++
T Consensus 65 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~pDiIh~~~~~~~~~~~~~ 138 (437)
T d2bisa1 65 VSYEERGNLRIYRIGGGL----LDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLRE--EPLPDVVHFHDWHTVFAGALI 138 (437)
T ss_dssp EEEEEETTEEEEEEESSG----GGCSCTTCSHHHHHHHHHHHHHHHHHHHHHHHTTS--SCCCSEEEEETGGGHHHHHHH
T ss_pred EEEECCCCEEEEECCCCC----CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCEEEECCHHHHHHHHHH
T ss_conf 233225881799617543----45411255311468999999899999989999840--899978998970466676543
Q ss_pred HHCCCCCEEEEECCCCHHHHHHH-HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCCHHH
Q ss_conf 81499969999579922257999-86188974556557678786787540123577999289889999971017970578
Q 001492 324 SGALNVPMVLTGHSLGRNKLEQL-LKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKL 402 (1067)
Q Consensus 324 ~~~~giP~V~t~H~l~~~~~~~l-~~~g~~~~~~i~~~y~i~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~~~~~~~~~ 402 (1067)
++..++|+|++.|++........ ........ .....++..++.....+|.+++.+.....+.+..+....
T Consensus 139 ~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~--- 209 (437)
T d2bisa1 139 KKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSE------LAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFE--- 209 (437)
T ss_dssp HHHHCCCEEEEESSCCCCCEEHHHHHHTTCGG------GCCSSEECHHHHHHHHSSEEEESCHHHHHHTHHHHGGGT---
T ss_pred HCCCCCCEEEEEEECCCCCCCHHHHHHCCCHH------HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC---
T ss_conf 01346762589962144555123321012013------456778899988887652211110245666666513456---
Q ss_pred HHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCE
Q ss_conf 99999977137445788899789939998899965789997542211112478889999986123576653116999858
Q 001492 403 EKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPM 482 (1067)
Q Consensus 403 ~~~l~~~~~~gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (1067)
.++.+||||+|.+.|.+....+ ..+.........+...+++.
T Consensus 210 -------------------~ki~vi~~g~d~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~ 251 (437)
T d2bisa1 210 -------------------GKITYVFNGIDCSFWNESYLTG-------------------SRDERKKSLLSKFGMDEGVT 251 (437)
T ss_dssp -------------------TTEEECCCCCCTTTSCGGGCCS-------------------CHHHHHHHHHHHTTCCSCEE
T ss_pred -------------------CCEEEEECCCCCCCCCCCCCCH-------------------HHHHHHHHHHHHHHCCCCCE
T ss_conf -------------------7518970465443433222201-------------------05888876545540267866
Q ss_pred EEEEECCC-CCCCHHHHHHHHHHCCCCCCCCCEEE-EEECCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCC
Q ss_conf 99970899-99999999999975013469995999-99328992454106558999999999762999968939999989
Q 001492 483 ILALSRPD-PKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQY 560 (1067)
Q Consensus 483 Il~vgRl~-~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~ 560 (1067)
|+++||+. ++||+..+++|+..+......+++.| ++|.++.. ....+..+... ....+.+.+.++.+
T Consensus 252 i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~~---------~~~~~~~~~~~--~~~~~~~~~~~~~~ 320 (437)
T d2bisa1 252 FMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPE---------LEGWARSLEEK--HGNVKVITEMLSRE 320 (437)
T ss_dssp EEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHH---------HHHHHHHHHHT--CTTEEEECSCCCHH
T ss_pred EEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCC---------CCCCHHHHCCC--CCCCEECCCCCCHH
T ss_conf 98730356651258999864102332333332114531022333---------32100221023--21000023457688
Q ss_pred CHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHC-CH
Q ss_conf 99999997131893999449989887899999984997999288770110014886699499999999999999631-99
Q 001492 561 DVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVS-EK 639 (1067)
Q Consensus 561 dv~~ly~~A~~~~dV~i~ps~~EgfgltllEAmA~G~PVIat~~Gg~~eii~~~~~Gllv~p~d~~~la~aL~~ll~-d~ 639 (1067)
++..+|+.| |++++||..|+||++++||||||+|||+++.||..|++.+ .+|+++++.|+++++++|.++++ ++
T Consensus 321 ~~~~~~~~a----di~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g~~~e~i~~-~~G~~~~~~d~~~la~~i~~ll~~~~ 395 (437)
T d2bisa1 321 FVRELYGSV----DFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILKALELSR 395 (437)
T ss_dssp HHHHHHTTC----SEEEECCSCCSSCHHHHHHHTTTCEEEEESCTTHHHHCCT-TTCEEECTTCHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHH----CCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHEEC-CCEEEECCCCHHHHHHHHHHHHHCCH
T ss_conf 899987642----2354446555642689999987998999389980773778-95899779999999999999983799
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 9999999999899970998999999999999968319
Q 001492 640 NLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRMRH 676 (1067)
Q Consensus 640 ~~~~~~~~~a~~~v~~fsw~~~a~~~l~~l~~~~~~~ 676 (1067)
+.++++++++++.+++|||+.++++|+++|++++.|.
T Consensus 396 ~~~~~~~~~~~~~~~~~s~~~~a~~~~~iY~~~i~r~ 432 (437)
T d2bisa1 396 SDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDRA 432 (437)
T ss_dssp SCTHHHHHHHHHHHHHSCHHHHHHHHHHHHHTCSCCB
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999996999999999999999999867
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=0 Score=346.23 Aligned_cols=450 Identities=17% Similarity=0.163 Sum_probs=270.5
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCC-CCCCC
Q ss_conf 39999941344346876788988877488999999999980999038999824889998787678763114799-99898
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGG-PEDDG 244 (1067)
Q Consensus 166 l~I~lis~~~~~~~~~~~~g~~~d~GG~~~~v~~LA~aLa~~G~v~~V~viT~~~~~~~v~~~y~~~~e~l~~~-~~~~~ 244 (1067)
|||++|+...+ | + ..+||...++..|+++|+++| |+|+|+|+.+.. +...+..+.+...-. .....
T Consensus 1 M~i~~v~~e~~----P--~---~~~GGl~~vv~~La~~L~~~G--h~V~Vi~P~y~~--~~~~~~~~~~~~~~~~~~~~~ 67 (477)
T d1rzua_ 1 MNVLSVSSEIY----P--L---IKTGGLADVVGALPIALEAHG--VRTRTLIPGYPA--VKAAVTDPVKCFEFTDLLGEK 67 (477)
T ss_dssp CEEEEECSCBT----T--T---BCSSHHHHHHHHHHHHHHTTT--CEEEEEEECCHH--HHHHCCSCEEEEEESCSSSCC
T ss_pred CEEEEEEEEEE----C--C---CCCCCHHHHHHHHHHHHHHCC--CEEEEEECCCCC--HHHHCCCCEEEEEEECCCCCE
T ss_conf 98999977220----6--3---326768999999999999769--969999669853--446525665899971467854
Q ss_pred CC--CCCCCCEEEEECCCCC-----CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHH
Q ss_conf 54--4566880999636788-----7667553466520677899999999997489886625999998549998698236
Q 001492 245 IE--VGESSGAYIIRIPFGP-----RDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAG 317 (1067)
Q Consensus 245 ~~--~~~~~gv~i~rip~~~-----~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~ 317 (1067)
.+ .....++.++.+.... ...+.. .....+...+.. +..+.....+.+...+. ..+|||||+|+|.++
T Consensus 68 ~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~pDIvH~h~~~~~ 142 (477)
T d1rzua_ 68 ADLLEVQHERLDLLILDAPAYYERSGGPYLG-QTGKDYPDNWKR-FAALSLAAARIGAGVLP---GWRPDMVHAHDWQAA 142 (477)
T ss_dssp EEEEEEEETTEEEEEEECHHHHCSSSCSSBC-TTSSBCTTHHHH-HHHHHHHHHHHHTTCSS---SCCCSEEEEEHHHHT
T ss_pred EEEEEEEECCEEEEEECCHHHCCCCCCCCCC-CCCCCCCCCHHH-HHHHHHHHHHHHHHCCC---CCCCCEEEECCHHHH
T ss_conf 7899999899159995582430467873557-666566521889-99999887766530256---888887993360677
Q ss_pred HHHHHH--HHCCCCCEEEEECCCCHHHH--HHHHHHCCCCHHHHH-HHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHH
Q ss_conf 999999--81499969999579922257--999861889745565-5767878678754012357799928988999997
Q 001492 318 DSAALL--SGALNVPMVLTGHSLGRNKL--EQLLKQGRQSKEDIN-STYKIMRRIEGEELSLDAAELVITSTKQEIDEQW 392 (1067)
Q Consensus 318 ~~a~~l--~~~~giP~V~t~H~l~~~~~--~~l~~~g~~~~~~i~-~~y~i~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~ 392 (1067)
..+..+ .+..++|+|+|.|++..... ...+..-........ ........+..++.....+|.++++|....++..
T Consensus 143 l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~ 222 (477)
T d1rzua_ 143 MTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEIL 222 (477)
T ss_dssp THHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTT
T ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 88999998547898889998324423467888998862114440654434320568999887764442131199999999
Q ss_pred HHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH-HHHHH
Q ss_conf 10179705789999997713744578889978993999889996578999754221111247888999998612-35766
Q 001492 393 GLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPA-IWSDV 471 (1067)
Q Consensus 393 ~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 471 (1067)
..+.+.... ... .....++.+||||+|.+.|.|.....-...... ........ .....
T Consensus 223 ~~~~~~~~~--~~~-----------~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~--------~~~~~~~~~~~~~~ 281 (477)
T d1rzua_ 223 TAEFGMGLE--GVI-----------GSRAHVLHGIVNGIDADVWNPATDHLIHDNYSA--------ANLKNRALNKKAVA 281 (477)
T ss_dssp SHHHHTTCH--HHH-----------HTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBT--------TBCTTHHHHHHHHH
T ss_pred HHHCCCCHH--HHH-----------HHCCCCEEEEECCCCHHHCCCCCCCCCCCCCHH--------HHHHHHHHHHHHHH
T ss_conf 875475366--566-----------651564799978934012056645333333104--------56777666389988
Q ss_pred HHHCC-CCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 53116-99985899970899999999999999750134699959999932899245410655899999999976299996
Q 001492 472 MRFLT-NPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQ 550 (1067)
Q Consensus 472 ~~~~~-~~~~~~Il~vgRl~~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~ 550 (1067)
.+... .++.++|+++||+.+.||++.|++|+.++. +..+.+ +++|.++.. ....+..+... +.++
T Consensus 282 ~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~--~~~~~l-~~~G~G~~~---------~~~~~~~~~~~--~~~~ 347 (477)
T d1rzua_ 282 EHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIV--SLGGRL-VVLGAGDVA---------LEGALLAAASR--HHGR 347 (477)
T ss_dssp HHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHH--HTTCEE-EEEECBCHH---------HHHHHHHHHHH--TTTT
T ss_pred HHCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHH--HHCCEE-EEEECCCCH---------HHHHHHHHHHH--CCCE
T ss_conf 741446678638999850021588379999999878--659839-999367745---------77899998763--5872
Q ss_pred EEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHCCCC---------CEEEEC
Q ss_conf 89399999899999999713189399944998988789999998499799928877011001488---------669949
Q 001492 551 VAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALN---------NGLLVD 621 (1067)
Q Consensus 551 V~~~g~~~~~dv~~ly~~A~~~~dV~i~ps~~EgfgltllEAmA~G~PVIat~~Gg~~eii~~~~---------~Gllv~ 621 (1067)
|.+.+..+.+++..+|+.| |+||+||.+|+||++++||||||+|||+|+.||+.|+|.++. +|++|+
T Consensus 348 v~~~~~~~~~~~~~~~~~a----D~~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~ 423 (477)
T d1rzua_ 348 VGVAIGYNEPLSHLMQAGC----DAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFS 423 (477)
T ss_dssp EEEEESCCHHHHHHHHHHC----SEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEES
T ss_pred EEEECCCCHHHHHHHHHHC----CCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCEEECCCCCCCCCCCCCEEEEC
T ss_conf 7897154705799999838----513488653578889999998399899907999740552487553346787448969
Q ss_pred CCCHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999631---9999999999998999709989999999999999683
Q 001492 622 PHDQQAIADALLKLVS---EKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRM 674 (1067)
Q Consensus 622 p~d~~~la~aL~~ll~---d~~~~~~~~~~a~~~v~~fsw~~~a~~~l~~l~~~~~ 674 (1067)
|.|+++++++|.++++ +|++|.++++++++ +.|||+.++++|+++|++++.
T Consensus 424 ~~d~~~la~ai~~~l~~~~~~~~~~~~~~~a~~--~~fsw~~~a~~~~~lY~~ll~ 477 (477)
T d1rzua_ 424 PVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYSQLIS 477 (477)
T ss_dssp SCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH--HHCCHHHHHHHHHHHHHHHHC
T ss_conf 999999999999998600799999999999998--518999999999999999849
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=8.9e-41 Score=285.77 Aligned_cols=365 Identities=15% Similarity=0.187 Sum_probs=247.6
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99994134434687678898887748899999999998099903899982488999878767876311479999898544
Q 001492 168 IVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEV 247 (1067)
Q Consensus 168 I~lis~~~~~~~~~~~~g~~~d~GG~~~~v~~LA~aLa~~G~v~~V~viT~~~~~~~v~~~y~~~~e~l~~~~~~~~~~~ 247 (1067)
|+|+...+. | .||.++++.+||++|+++| |+|+|+|+.....
T Consensus 2 i~f~~~~y~-----------p-~GG~e~~~~~la~~L~~~G--~~V~v~~~~~~~~------------------------ 43 (370)
T d2iw1a1 2 VAFCLYKYF-----------P-FGGLQRDFMRIASTVAARG--HHVRVYTQSWEGD------------------------ 43 (370)
T ss_dssp EEEECSEEC-----------T-TCHHHHHHHHHHHHHHHTT--CCEEEEESEECSC------------------------
T ss_pred EEEEECCCC-----------C-CCCHHHHHHHHHHHHHHCC--CEEEEEECCCCCC------------------------
T ss_conf 899914889-----------9-9989999999999999779--9799995678778------------------------
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 56688099963678876675534665206778999999999974898866259999985499986982369999998149
Q 001492 248 GESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGAL 327 (1067)
Q Consensus 248 ~~~~gv~i~rip~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~~ 327 (1067)
...++.+++++......+ .....|.......+.. ..+|+||.+....+
T Consensus 44 -~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~--------------~~~d~v~~~~~~~~---------- 91 (370)
T d2iw1a1 44 -CPKAFELIQVPVKSHTNH-------GRNAEYYAWVQNHLKE--------------HPADRVVGFNKMPG---------- 91 (370)
T ss_dssp -CCTTCEEEECCCCCSSHH-------HHHHHHHHHHHHHHHH--------------SCCSEEEESSCCTT----------
T ss_pred -CCCCEEEEECCCCCCCCC-------HHHHHHHHHHHHHHHH--------------CCCCEEEECCCCCH----------
T ss_conf -888638998676554430-------1158899999999986--------------16552531036723----------
Q ss_pred CCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 99699995799222579998618897455655767878678754012357799928988999997101797057899999
Q 001492 328 NVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLR 407 (1067)
Q Consensus 328 giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~i~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~~~~~~~~~~~~l~ 407 (1067)
..+. ..+....... ...... ........+.....+.........++.+++.+......+...+.. .+
T Consensus 92 -~~~~-~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------- 158 (370)
T d2iw1a1 92 -LDVY-FAADVCYAEK--VAQEKG-FLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQT-EP------- 158 (370)
T ss_dssp -CSEE-ECCSCCHHHH--HHHHCC-HHHHTSHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHHHCC-CG-------
T ss_pred -HHHH-HHHHCCCCEE--EEEECC-CCCCCCCHHCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCC-CC-------
T ss_conf -7899-8762244104--663047-420004000006788999974215746998247999999986099-96-------
Q ss_pred HHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH-HHHHHHHCCCCCCCEEEEE
Q ss_conf 977137445788899789939998899965789997542211112478889999986123-5766531169998589997
Q 001492 408 ARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAI-WSDVMRFLTNPHKPMILAL 486 (1067)
Q Consensus 408 ~~~~~gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Il~v 486 (1067)
.++.++|||+|.+.+.+... +.. ...+..+...+++++++++
T Consensus 159 --------------~~i~vi~~gv~~~~~~~~~~-----------------------~~~~~~~r~~~~~~~~~~~i~~~ 201 (370)
T d2iw1a1 159 --------------ERFQILPPGIYPDRKYSEQI-----------------------PNSREIYRQKNGIKEQQNLLLQV 201 (370)
T ss_dssp --------------GGEEECCCCCCGGGSGGGSC-----------------------TTHHHHHHHHTTCCTTCEEEEEE
T ss_pred --------------CEEEEEEEECCCCCCCCCCC-----------------------HHHHHHHHHCCCCCCCCEEEEEE
T ss_conf --------------42899974022221124676-----------------------56666654304888663699998
Q ss_pred ECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHH
Q ss_conf 08999999999999997501346999599999328992454106558999999999762999968939999989999999
Q 001492 487 SRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIY 566 (1067)
Q Consensus 487 gRl~~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dv~~ly 566 (1067)
||+.+.||++.+++|+..+...... ...+++|+++.. ..+..++++++...++.|+|+ .+++..+|
T Consensus 202 gr~~~~Kg~~~li~a~~~l~~~~~~-~~~~ii~g~~~~-----------~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~ 267 (370)
T d2iw1a1 202 GSDFGRKGVDRSIEALASLPESLRH-NTLLFVVGQDKP-----------RKFEALAEKLGVRSNVHFFSG--RNDVSELM 267 (370)
T ss_dssp CSCTTTTTHHHHHHHHHTSCHHHHH-TEEEEEESSSCC-----------HHHHHHHHHHTCGGGEEEESC--CSCHHHHH
T ss_pred ECCCCCCCHHHHCCCCCCCCCCCCC-CEEEECCCCCCC-----------CCCCCCCCCCCCCCCCCCCCC--CCCCCCCC
T ss_conf 5145542033320111233233221-000001122222-----------232222222222222222332--33444222
Q ss_pred HHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHCCCCCEEEE-CCCCHHHHHHHHHHHHCCHHHHHHH
Q ss_conf 971318939994499898878999999849979992887701100148866994-9999999999999963199999999
Q 001492 567 RLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLV-DPHDQQAIADALLKLVSEKNLWVEC 645 (1067)
Q Consensus 567 ~~A~~~~dV~i~ps~~EgfgltllEAmA~G~PVIat~~Gg~~eii~~~~~Gllv-~p~d~~~la~aL~~ll~d~~~~~~~ 645 (1067)
+.| |++|+||..|+||++++|||+||+|||+|+.||..|++.++.+|+++ +|.|+++++++|.++++|+++++++
T Consensus 268 ~~a----dv~v~ps~~E~~~~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d~~~~~~~ 343 (370)
T d2iw1a1 268 AAA----DLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAW 343 (370)
T ss_dssp HHC----SEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCHHHHHHH
T ss_pred CCC----CCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCHHHHHHH
T ss_conf 333----3444322223433113321457703999389971888527983699869999999999999997699999999
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 9999899970998999999999999
Q 001492 646 RKNGWKNIHLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 646 ~~~a~~~v~~fsw~~~a~~~l~~l~ 670 (1067)
++++++.++.|+|..+.+++.++|+
T Consensus 344 ~~~ar~~~~~~~~~~~~~~~~~ii~ 368 (370)
T d2iw1a1 344 AENARHYADTQDLYSLPEKAADIIT 368 (370)
T ss_dssp HHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHH
T ss_conf 9999999998285479999999984
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4e-36 Score=254.80 Aligned_cols=420 Identities=14% Similarity=0.120 Sum_probs=272.0
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999413443468767889888774889999999999809990389998248899987876787631147999989854
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lis~~~~~~~~~~~~g~~~d~GG~~~~v~~LA~aLa~~G~v~~V~viT~~~~~~~v~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
|+++||-...+ ...+.+..||..+-+.. .+.+.||++ +-......++ .++...
T Consensus 2 rlivvsnr~~~-----~~~~~~~~gGl~~al~~---~~~~~~g~W---vgw~g~~~~~-----~~~~~~----------- 54 (456)
T d1uqta_ 2 RLVVVSNRIAP-----PDEHAASAGGLAVGILG---ALKAAGGLW---FGWSGETGNE-----DQPLKK----------- 54 (456)
T ss_dssp CEEEEEEECCC-----CC----CCCHHHHHHHH---HHHHHCEEE---EEEEEEESCC-----SSCCEE-----------
T ss_pred CEEEEECCCCC-----CCCCCCCCCCHHHHHHH---HHHHCCCEE---EECCCCCCCC-----CCHHHH-----------
T ss_conf 78999799997-----88877899618997299---995179789---9669988766-----423455-----------
Q ss_pred CCCCCCEEEEECCCCCCC-----CCCCCCCCCCHHH----------HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf 456688099963678876-----6755346652067----------7899999999997489886625999998549998
Q 001492 247 VGESSGAYIIRIPFGPRD-----KYLRKELLWPYIQ----------EFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHG 311 (1067)
Q Consensus 247 ~~~~~gv~i~rip~~~~~-----~~l~k~~l~~~l~----------~f~~~~l~~~~~~~~~l~~~~~~~~~~~pDvIh~ 311 (1067)
....+.....++..+.+ ....+..+||.+. ............++.++.+.+.. -|+|+.
T Consensus 55 -~~~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWpl~H~~~~~~~~~~~~~~~Y~~vN~~fA~~l~~~~~~-----~d~iwv 128 (456)
T d1uqta_ 55 -VKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLVQFQRPAWDGYLRVNALLADKLLPLLQD-----DDIIWI 128 (456)
T ss_dssp -EEETTEEEEEEEECHHHHHHHTTTHHHHTHHHHHTTCGGGCCCCHHHHHHHHHHHHHHHHHHGGGCCT-----TCEEEE
T ss_pred -HHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC-----CCEEEE
T ss_conf -54058516995699999999998715442621015766654403788888999999999999872568-----986999
Q ss_pred CCCCHHHHHHHHH-HCCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHH
Q ss_conf 6982369999998-149996999957992225799986188974556557678786787540123577999289889999
Q 001492 312 HYADAGDSAALLS-GALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDE 390 (1067)
Q Consensus 312 h~~~~~~~a~~l~-~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~i~~ri~~E~~~l~~ad~Vi~~S~~~~~~ 390 (1067)
|.+....++..+. ...+.+++++.|..++..- .+.. .+. ...+ ...+-.+|.|...+......
T Consensus 129 hDyhl~llp~~lR~~~~~~~i~~flH~pfP~~~--~fr~--lp~-----~~~i-------l~~ll~~d~igf~~~~~~~~ 192 (456)
T d1uqta_ 129 HDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPE--IFNA--LPT-----YDTL-------LEQLCDYDLLGFQTENDRLA 192 (456)
T ss_dssp ESGGGTTHHHHHHHTTCCSCEEEECCSCCCCHH--HHTT--STT-----HHHH-------HHHHTTSSEEEESSHHHHHH
T ss_pred ECCCHHHHHHHHHHHCCCCCEEEEECCCCCCHH--HHCC--CCC-----HHHH-------HHHHHCCCCCCCCCHHHHHH
T ss_conf 545255569999985899858999689999857--7554--850-----6999-------97763226200358999999
Q ss_pred HHHHCCCCCHHHHHHHHHH--HHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 9710179705789999997--71374457888997899399988999657899975422111124788899999861235
Q 001492 391 QWGLYDGFDVKLEKVLRAR--ARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIW 468 (1067)
Q Consensus 391 ~~~~~~~~~~~~~~~l~~~--~~~gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (1067)
+.... .+.++.. ...++...|+.. ++.++|+|||++.|...... +.....
T Consensus 193 fl~~~-------~~ll~~~~~~~~~i~~~gr~v-~v~~~p~GID~~~~~~~~~~--------------------~~~~~~ 244 (456)
T d1uqta_ 193 FLDCL-------SNLTRVTTRSAKSHTAWGKAF-RTEVYPIGIEPKEIAKQAAG--------------------PLPPKL 244 (456)
T ss_dssp HHHHH-------HHHSCEEEETTTEEEETTEEE-EEEECCCCCCHHHHHHHHHS--------------------CCCHHH
T ss_pred HHHHH-------HHHHCCCCCCCCEEEECCCEE-EEEEECCCCCCHHHHHHCCC--------------------HHHHHH
T ss_conf 99999-------997386112687299568155-30120676562665431140--------------------779999
Q ss_pred HHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCC----EEE-EEECC--C---CHHHHHCCCHHHHHHH
Q ss_conf 766531169998589997089999999999999975013469995----999-99328--9---9245410655899999
Q 001492 469 SDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELAN----LTL-IMGNR--D---DIEEMSSGNASVLITV 538 (1067)
Q Consensus 469 ~~~~~~~~~~~~~~Il~vgRl~~~Kgi~~ll~A~~~l~~l~~~~~----l~l-IvG~~--~---~~~~l~~~~~~~~~~i 538 (1067)
..+.. ...++++|+++||+++.||+..+++||+++. ...|+ +.+ +++.+ . ++.++..+......++
T Consensus 245 ~~l~~--~~~~~~~il~V~Rld~~KGi~~~l~A~~~~l--~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~i 320 (456)
T d1uqta_ 245 AQLKA--ELKNVQNIFSVERLDYSKGLPERFLAYEALL--EKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRI 320 (456)
T ss_dssp HHHHH--HTTTCEEEEEECCBCGGGCHHHHHHHHHHHH--HHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHH--HCCCCEEEEEECCCCHHHCHHHHHHHHHHHH--HHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99777--5289859999378743206589999999998--7584314618999974875345688999999999999998
Q ss_pred HHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCC-----EEECCCCCCHHHHCC
Q ss_conf 999976299996893999998999999997131893999449989887899999984997-----999288770110014
Q 001492 539 LKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLP-----MVATKNGGPVDIHRA 613 (1067)
Q Consensus 539 ~~l~~~~~l~~~V~~~g~~~~~dv~~ly~~A~~~~dV~i~ps~~EgfgltllEAmA~G~P-----VIat~~Gg~~eii~~ 613 (1067)
+..+...++.+.+.+.+.++++++.++|+.| |++++||++||||++++||||||+| +|+|+.+|+.+.+.
T Consensus 321 n~~~~~~~~~~~v~~~~~~~~~~l~a~~~~A----dv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l~- 395 (456)
T d1uqta_ 321 NGKYGQLGWTPLYYLNQHFDRKLLMKIFRYS----DVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT- 395 (456)
T ss_dssp HHHHCBTTBCSEEEECSCCCHHHHHHHHHHC----SEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT-
T ss_pred HHHHCCCCCCCEEECCCCCCHHHHHHHHHHH----CEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCHHHHC-
T ss_conf 7652127987502115876788876777530----54525876578883999999908988897589728978778859-
Q ss_pred CCCEEEECCCCHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 8866994999999999999996319-999999999998999709989999999999999683
Q 001492 614 LNNGLLVDPHDQQAIADALLKLVSE-KNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRM 674 (1067)
Q Consensus 614 ~~~Gllv~p~d~~~la~aL~~ll~d-~~~~~~~~~~a~~~v~~fsw~~~a~~~l~~l~~~~~ 674 (1067)
+|++|+|+|++++|++|.++|++ +++++++.+++++.+..|++..|++.|++.++++..
T Consensus 396 --~g~lVnP~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W~~~fl~~l~~~~~ 455 (456)
T d1uqta_ 396 --SALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVP 455 (456)
T ss_dssp --TSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred --CEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
T ss_conf --769989599999999999997499999999999998999978999999999999875517
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=100.00 E-value=2.4e-33 Score=236.25 Aligned_cols=242 Identities=17% Similarity=0.240 Sum_probs=188.2
Q ss_pred CEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEE
Q ss_conf 83899998579999999635689999999999824789834079998799988899999844999899977998179469
Q 001492 775 RRLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEM 854 (1067)
Q Consensus 775 kklilia~D~DgTl~~~~~~i~~~~~~al~~l~~~g~~g~i~~vvIaTGR~~~~l~~~l~~~gi~~~~~d~~I~~nGs~I 854 (1067)
+.++++ |+||||.+++. .++.+ ..+.++++.| + .|+++|||++.++..+++.+++. .++++||+||+.+
T Consensus 3 ~~li~~--DlDGTL~~~~~-~~~~~-~~~~~~~~~g----~-~v~i~TGR~~~~~~~~~~~~~~~--~~~~~i~~~G~~i 71 (244)
T d1s2oa1 3 QLLLIS--DLDNTWVGDQQ-ALEHL-QEYLGDRRGN----F-YLAYATGRSYHSARELQKQVGLM--EPDYWLTAVGSEI 71 (244)
T ss_dssp SEEEEE--CTBTTTBSCHH-HHHHH-HHHHHTTGGG----E-EEEEECSSCHHHHHHHHHHHTCC--CCSEEEETTTTEE
T ss_pred CEEEEE--ECCCCCCCCCC-CHHHH-HHHHHHHCCC----C-EEEEECCCCHHHHHHHHHHCCCC--CCCEEEECCCEEE
T ss_conf 669999--89666799998-98999-9999998199----9-89998899989999999973998--7765885162599
Q ss_pred EECCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHH
Q ss_conf 80588754688677882324101233265026999996420135788888999983113345793489999229980578
Q 001492 855 YYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARR 934 (1067)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~~~~~I~~~w~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~~~~~~~~~ 934 (1067)
+++.. .+..|..++.+.|..+.+.............. ......++++++.........
T Consensus 72 ~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~ 129 (244)
T d1s2oa1 72 YHPEG---------LDQHWADYLSEHWQRDILQAIADGFEALKPQS-------------PLEQNPWKISYHLDPQACPTV 129 (244)
T ss_dssp EETTE---------ECHHHHHHHHTTCCHHHHHHHHHTCTTEEECC-------------GGGCBTTBEEEEECTTSCTHH
T ss_pred EECCC---------CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-------------HHHHCCEEEEEECCCCCCHHH
T ss_conf 97167---------41678988878876879999985355433257-------------244062689995252115899
Q ss_pred HHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCEEEEECC
Q ss_conf 99999999804892899984089038980189998999999999919974537998367899885654128860899279
Q 001492 935 IDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKG 1014 (1067)
Q Consensus 935 ~~el~~~L~~~~~~~~v~~s~~~~~ldV~P~~asKg~Alr~L~~~~gid~~~via~~GDs~N~D~~eML~~~~~gVaMgN 1014 (1067)
.+++...+......+....+.+. .+||+|.+++||+|+++|++++|++.+++++ |||+.| | ++||+.++++|+|+|
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~K~~a~~~l~~~~gi~~~~~v~-~GD~~N-D-~~Ml~~~~~~vav~n 205 (244)
T d1s2oa1 130 IDQLTEMLKETGIPVQVIFSSGK-DVDLLPQRSNKGNATQYLQQHLAMEPSQTLV-CGDSGN-D-IGLFETSARGVIVRN 205 (244)
T ss_dssp HHHHHHHHHTSSCCEEEEEETTT-EEEEEETTCSHHHHHHHHHHHTTCCGGGEEE-EECSGG-G-HHHHTSSSEEEECTT
T ss_pred HHHHHHHHHHHCCCCEEEECCCC-EEEEEECCCCHHHHHHHHHHHCCCCHHHEEE-ECCCCC-C-HHHHHHCCCEEEECC
T ss_conf 99999999863234126630781-8999867641557788887741577303799-758887-7-999961891899679
Q ss_pred CCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCC
Q ss_conf 72025355410257678877789998355057666899999999625557
Q 001492 1015 VVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVGKAS 1064 (1067)
Q Consensus 1015 A~~~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g~~~ 1064 (1067)
|. ++++..|+ ...+...|+|.....+||.+||+||+++.
T Consensus 206 a~---~~lk~~a~--------~~~~~~~~~~~~~~~~Gi~e~l~~f~~l~ 244 (244)
T d1s2oa1 206 AQ---PELLHWYD--------QWGDSRHYRAQSSHAGAILEAIAHFDFLS 244 (244)
T ss_dssp CC---HHHHHHHH--------HHCCTTEEECSSCHHHHHHHHHHHTTCCC
T ss_pred CC---HHHHHHHH--------CCCCCCEEECCCCCCCHHHHHHHHHCCCC
T ss_conf 99---99999863--------23666537718997148999999828679
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=100.00 E-value=5e-33 Score=234.19 Aligned_cols=243 Identities=9% Similarity=0.083 Sum_probs=161.5
Q ss_pred EEEEEEEECCCCCCCC-CHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEE
Q ss_conf 3899998579999999-635689999999999824789834079998799988899999844999899977998179469
Q 001492 776 RLIVIALDCYDSKGAP-DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEM 854 (1067)
Q Consensus 776 klilia~D~DgTl~~~-~~~i~~~~~~al~~l~~~g~~g~i~~vvIaTGR~~~~l~~~l~~~gi~~~~~d~~I~~nGs~I 854 (1067)
|++|+ |+||||.++ ...+++.++++|++++++| + .|++||||++..+..+....++. .++++||+||+.+
T Consensus 2 k~if~--DlDGTL~~~~~~~i~~~~~~al~~l~~~g----i-~v~~~TGR~~~~~~~l~~~~~~~--~~~~~I~~nGa~i 72 (260)
T d2rbka1 2 KALFF--DIDGTLVSFETHRIPSSTIEALEAAHAKG----L-KIFIATGRPKAIINNLSELQDRN--LIDGYITMNGAYC 72 (260)
T ss_dssp CEEEE--CSBTTTBCTTTSSCCHHHHHHHHHHHHTT----C-EEEEECSSCGGGCCSCHHHHHTT--CCCEEEEGGGTEE
T ss_pred EEEEE--ECCCCCCCCCCCCCCHHHHHHHHHHHHCC----C-EEEEECCCCHHHHHHHHHHHHCC--CCCCEEECCCCCC
T ss_conf 29999--88888718997998999999999999788----9-99998899889999999997158--8773476277401
Q ss_pred EECCCCCCCCCCCCCCHHHHHCCCC---------------CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8058875468867788232410123---------------3265026999996420135788888999983113345793
Q 001492 855 YYPGTYTEEGGKLFPDPDYASHIDY---------------RWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNA 919 (1067)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~~~~~I~~---------------~w~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (1067)
++++.... ....+.+....+.. .|........+............ .......+......
T Consensus 73 ~~~~~~i~---~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 146 (260)
T d2rbka1 73 FVGEEVIY---KSAIPQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNV---IPTVSFEEASNKEV 146 (260)
T ss_dssp EETTEEEE---ECCCCHHHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCC---CCBCCHHHHHTSCC
T ss_pred CCCCCCCC---CCCCCHHHHHHHHHHHHHCCCCEEEEECCCEEECCCHHHHHHHHHHHHCCCC---CCCCCHHHHCCCCE
T ss_conf 25753210---4678889999999999973986899835755413640789999998632576---76567767367646
Q ss_pred EEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCH
Q ss_conf 48999922998057899999999804892899984089038980189998999999999919974537998367899885
Q 001492 920 HCISYLIKDPSKARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDY 999 (1067)
Q Consensus 920 ~~is~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~ldV~P~~asKg~Alr~L~~~~gid~~~via~~GDs~N~D~ 999 (1067)
.++..... . +....+......+++..+.+. ++||+|.++||+.||++|++++|++.+++++ |||++| |
T Consensus 147 ~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~~~-~~ei~p~~~sK~~al~~l~~~~~i~~~~~~a-~GD~~N-D- 214 (260)
T d2rbka1 147 IQMTPFIT--E------EEEKEVLPSIPTCEIGRWYPA-FADVTAKGDTKQKGIDEIIRHFGIKLEETMS-FGDGGN-D- 214 (260)
T ss_dssp SEEEECCC--H------HHHHHHGGGSTTCEEECSSTT-CCEEESTTCSHHHHHHHHHHHHTCCGGGEEE-EECSGG-G-
T ss_pred EEEEECCC--H------HHHHHHHHHHCCCCCEEECCC-EEEEEECCCCHHHHHHHHHHHCCCCHHHEEE-ECCCCC-C-
T ss_conf 98851278--8------999999987215540145586-7999748899999999998732235755167-658855-5-
Q ss_pred HHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCC
Q ss_conf 6541288608992797202535541025767887778999835505766689999999962555
Q 001492 1000 EELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVGKA 1063 (1067)
Q Consensus 1000 ~eML~~~~~gVaMgNA~~~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g~~ 1063 (1067)
++||+.++++|||+||. +++|..|+ |+|+++.++||+++|+||++|
T Consensus 215 ~~Ml~~a~~svav~na~---~~lk~~A~---------------~vt~~~~~~Gv~~~l~~~~~~ 260 (260)
T d2rbka1 215 ISMLRHAAIGVAMGQAK---EDVKAAAD---------------YVTAPIDEDGISKAMKHFGII 260 (260)
T ss_dssp HHHHHHSSEEEECTTSC---HHHHHHSS---------------EECCCGGGTHHHHHHHHHTCC
T ss_pred HHHHHHCCEEEEECCCC---HHHHHHCC---------------EEECCCCCCHHHHHHHHHCCC
T ss_conf 99998489089958998---99998479---------------780888756899999985889
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=1.7e-31 Score=224.03 Aligned_cols=247 Identities=13% Similarity=0.115 Sum_probs=162.0
Q ss_pred EEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEE
Q ss_conf 38999985799999996356899999999998247898340799987999888999998449998999779981794698
Q 001492 776 RLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMY 855 (1067)
Q Consensus 776 klilia~D~DgTl~~~~~~i~~~~~~al~~l~~~g~~g~i~~vvIaTGR~~~~l~~~l~~~gi~~~~~d~~I~~nGs~I~ 855 (1067)
|++++ |+||||.++++.+++.++++|++++++| + .|++||||++..+.+++..++++ +++||.||+.|+
T Consensus 2 Kli~~--DlDGTLl~~~~~i~~~~~~~l~~l~~~G----i-~~~i~TGR~~~~~~~~~~~l~~~----~~~i~~nG~~i~ 70 (285)
T d1nrwa_ 2 KLIAI--DLDGTLLNSKHQVSLENENALRQAQRDG----I-EVVVSTGRAHFDVMSIFEPLGIK----TWVISANGAVIH 70 (285)
T ss_dssp CEEEE--ECCCCCSCTTSCCCHHHHHHHHHHHHTT----C-EEEEECSSCHHHHHHHHGGGTCC----CEEEEGGGTEEE
T ss_pred EEEEE--ECCCCCCCCCCCCCHHHHHHHHHHHHCC----C-EEEEECCCCHHHHHHHHHHHCCC----CEEEECCCEEEE
T ss_conf 09999--7886641887941999999999999788----9-99999799989999999980998----589954731699
Q ss_pred ECCCCCCCCCCCCCCHHHHHCCC--------------------CCCCCCHHHHHHHHHHHCCCC---------------C
Q ss_conf 05887546886778823241012--------------------332650269999964201357---------------8
Q 001492 856 YPGTYTEEGGKLFPDPDYASHID--------------------YRWGCDGLKKTIWKLMNTTEG---------------G 900 (1067)
Q Consensus 856 ~~~~~~~~~~~~~~d~~~~~~I~--------------------~~w~~~~l~~~l~~~~~~~~~---------------~ 900 (1067)
.+.+.... ....+......+. ..+..+.+......+.....+ .
T Consensus 71 ~~~~~~i~--~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (285)
T d1nrwa_ 71 DPEGRLYH--HETIDKKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQ 148 (285)
T ss_dssp CTTCCEEE--ECCCCHHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHT
T ss_pred ECCCCEEE--ECCCCHHHHHHHHHHHHHCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
T ss_conf 56874356--4168889999999999976971687417648860663777777777664057421055653333333101
Q ss_pred CCCCCCCCCCCC-CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 888899998311-3345793489999229980578999999998048928999840890389801899989999999999
Q 001492 901 ENSKNSSSPIQE-DQKSSNAHCISYLIKDPSKARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVR 979 (1067)
Q Consensus 901 ~~~~~~~~~~~~-~~~~~~~~~is~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~ldV~P~~asKg~Alr~L~~~ 979 (1067)
... .....+.+ ...........+... .............+ .....++++.+... ++||+|+++|||.|+++|+++
T Consensus 149 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~s~~~-~ldi~~~~~~K~~ai~~l~~~ 224 (285)
T d1nrwa_ 149 SGF-AYINSFQELFEADEPIDFYNILGF-SFFKEKLEAGWKRY-EHAEDLTLVSSAEH-NFELSSRKASKGQALKRLAKQ 224 (285)
T ss_dssp CCE-EECSCGGGGTSSSSCCCEEEEEEE-CSCHHHHHHHHHHH-TTCTTEEEECSSTT-EEEEEETTCSHHHHHHHHHHH
T ss_pred CCC-EEECHHHHHHHCCCCHHHEEEECC-CCHHHHHHHHHHHH-HCCCCEEEEEECCC-EEEEECCCCHHHHHHHHHHHH
T ss_conf 452-010318887631452112013112-32189999999986-32797699994796-899955540236689887765
Q ss_pred HCCCCCCEEEEECCCCCCCHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHH
Q ss_conf 19974537998367899885654128860899279720253554102576788777899983550576668999999996
Q 001492 980 WRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQ 1059 (1067)
Q Consensus 980 ~gid~~~via~~GDs~N~D~~eML~~~~~gVaMgNA~~~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~ 1059 (1067)
+|++++++++ |||+.| | ++||+.++.||||+||. +++|..|+ ++|.++.+|||+++|++
T Consensus 225 ~gi~~~~vi~-~GD~~N-D-~~Ml~~a~~svam~na~---~~~k~~A~---------------~v~~~~~~~Gv~~~l~~ 283 (285)
T d1nrwa_ 225 LNIPLEETAA-VGDSLN-D-KSMLEAAGKGVAMGNAR---EDIKSIAD---------------AVTLTNDEHGVAHMMKH 283 (285)
T ss_dssp TTCCGGGEEE-EESSGG-G-HHHHHHSSEEEECTTCC---HHHHHHCS---------------EECCCGGGTHHHHHHHH
T ss_pred CCCCCCCEEE-EECCHH-H-HHHHHHCCEEEEECCCC---HHHHHHCC---------------EECCCCCCCHHHHHHHH
T ss_conf 0557204999-929788-8-99998489189968998---99998589---------------88278875589999998
Q ss_pred H
Q ss_conf 2
Q 001492 1060 V 1060 (1067)
Q Consensus 1060 ~ 1060 (1067)
|
T Consensus 284 l 284 (285)
T d1nrwa_ 284 L 284 (285)
T ss_dssp T
T ss_pred H
T ss_conf 6
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.98 E-value=1.3e-31 Score=224.76 Aligned_cols=241 Identities=14% Similarity=0.180 Sum_probs=161.7
Q ss_pred EEEEEEEECCCCCCCCCHHH-HHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEE
Q ss_conf 38999985799999996356-89999999999824789834079998799988899999844999899977998179469
Q 001492 776 RLIVIALDCYDSKGAPDKKM-IQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEM 854 (1067)
Q Consensus 776 klilia~D~DgTl~~~~~~i-~~~~~~al~~l~~~g~~g~i~~vvIaTGR~~~~l~~~l~~~gi~~~~~d~~I~~nGs~I 854 (1067)
|++++ |+||||.++.+.+ .+.++++|++++++| + .|+|||||++..+.++++++++ ..++||+||+.|
T Consensus 3 Kli~~--DlDGTLl~~~~~~~~~~~~~~l~~l~~~g----i-~~~i~TGR~~~~~~~~~~~l~~----~~~~i~~nGa~i 71 (269)
T d1rlma_ 3 KVIVT--DMDGTFLNDAKTYNQPRFMAQYQELKKRG----I-KFVVASGNQYYQLISFFPELKD----EISFVAENGALV 71 (269)
T ss_dssp CEEEE--CCCCCCSCTTSCCCHHHHHHHHHHHHHHT----C-EEEEECSSCHHHHGGGCTTTTT----TSEEEEGGGTEE
T ss_pred EEEEE--ECCCCCCCCCCCCCHHHHHHHHHHHHHCC----C-EEEEECCCCHHHHHHHHHHHCC----CCCEEEECEEEE
T ss_conf 99999--47756727998399699999999999789----9-8999959998999999998286----662674121699
Q ss_pred EECCCCCCCCCCCCCCHHH------HH--CCCC-------CCC-CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8058875468867788232------41--0123-------326-502699999642013578888899998311334579
Q 001492 855 YYPGTYTEEGGKLFPDPDY------AS--HIDY-------RWG-CDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSN 918 (1067)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~~------~~--~I~~-------~w~-~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (1067)
+..+.... ...+..+..+ .. .+.. .+. ................... ...........
T Consensus 72 ~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 144 (269)
T d1rlma_ 72 YEHGKQLF-HGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLK------PVKDYQEIDDV 144 (269)
T ss_dssp EETTEEEE-ECCCCHHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEE------EESCGGGCCSC
T ss_pred EECCCEEE-EECCCHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCHHHHHHHHHHCCCCC------CCCCHHHHCCH
T ss_conf 98990899-732665888999999986248429998157368846881889999875234552------02537662210
Q ss_pred CEEEEEEECCCCCHHHHHHHHHHHHH-CCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCC
Q ss_conf 34899992299805789999999980-48928999840890389801899989999999999199745379983678998
Q 001492 919 AHCISYLIKDPSKARRIDDLRQKLRM-RGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDT 997 (1067)
Q Consensus 919 ~~~is~~~~~~~~~~~~~el~~~L~~-~~~~~~v~~s~~~~~ldV~P~~asKg~Alr~L~~~~gid~~~via~~GDs~N~ 997 (1067)
.+++.....+ . ...++.+.+.. ....+.++.+... ++||+|+++|||.||++|++++|++++++++ |||+.|
T Consensus 145 ~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~di~p~~~sK~~al~~l~~~lgi~~~~vi~-~GD~~N- 217 (269)
T d1rlma_ 145 LFKFSLNLPD-E---QIPLVIDKLHVALDGIMKPVTSGFG-FIDLIIPGLHKANGISRLLKRWDLSPQNVVA-IGDSGN- 217 (269)
T ss_dssp EEEEEEECCG-G---GHHHHHHHHHHHTTTSSEEEECSTT-EEEEECTTCSHHHHHHHHHHHHTCCGGGEEE-EECSGG-
T ss_pred HEEEEECCCH-H---HHHHHHHHHHHHHHCCEEEEEECCC-EEEEECCCHHHHHHHHHHHHHHCCCCCCEEE-ECCCCC-
T ss_conf 2477750888-9---9999999999985153389997582-6888458657778888776650214241899-908844-
Q ss_pred CHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHH
Q ss_conf 856541288608992797202535541025767887778999835505766689999999962
Q 001492 998 DYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQV 1060 (1067)
Q Consensus 998 D~~eML~~~~~gVaMgNA~~~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~ 1060 (1067)
| ++||+.+++||||+||. +++|.+|+ ++|.+++++||+.+|+++
T Consensus 218 D-~~Ml~~ag~~vam~Na~---~~lk~~A~---------------~v~~~~~~~Gva~~i~~~ 261 (269)
T d1rlma_ 218 D-AEMLKMARYSFAMGNAA---ENIKQIAR---------------YATDDNNHEGALNVIQAV 261 (269)
T ss_dssp G-HHHHHHCSEEEECTTCC---HHHHHHCS---------------EECCCGGGTHHHHHHHHH
T ss_pred H-HHHHHHCCEEEEECCCC---HHHHHHCC---------------EECCCCCCCHHHHHHHHH
T ss_conf 1-99998589189958998---99998478---------------881889845999999999
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.98 E-value=2.9e-31 Score=222.48 Aligned_cols=247 Identities=14% Similarity=0.116 Sum_probs=164.6
Q ss_pred CEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEE
Q ss_conf 83899998579999999635689999999999824789834079998799988899999844999899977998179469
Q 001492 775 RRLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEM 854 (1067)
Q Consensus 775 kklilia~D~DgTl~~~~~~i~~~~~~al~~l~~~g~~g~i~~vvIaTGR~~~~l~~~l~~~gi~~~~~d~~I~~nGs~I 854 (1067)
.|++++ |+||||.+.++.+++.++++|++++++| + .|+++|||++..+.++++++++.. .++++|++||+.+
T Consensus 4 iKli~~--DlDGTL~~~~~~i~~~~~~al~~L~~~g----i-~v~i~TGR~~~~~~~~~~~l~l~~-~~~~~i~~nGa~i 75 (271)
T d1rkqa_ 4 IKLIAI--DMDGTLLLPDHTISPAVKNAIAAARARG----V-NVVLTTGRPYAGVHNYLKELHMEQ-PGDYCITYNGALV 75 (271)
T ss_dssp CCEEEE--CCCCCCSCTTSCCCHHHHHHHHHHHHTT----C-EEEEECSSCGGGTHHHHHHTTCCS-TTCEEEEGGGTEE
T ss_pred EEEEEE--ECCCCCCCCCCCCCHHHHHHHHHHHHCC----C-EEEEECCCCHHHHHHHHHHHCCCC-CCCEEEECCCEEE
T ss_conf 069999--5776643897951999999999999789----9-999998999899999999846768-9858998685167
Q ss_pred EECCCCCCCCCCCCCCHHHHHCCCC------------------CCCCC-HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8058875468867788232410123------------------32650-2699999642013578888899998311334
Q 001492 855 YYPGTYTEEGGKLFPDPDYASHIDY------------------RWGCD-GLKKTIWKLMNTTEGGENSKNSSSPIQEDQK 915 (1067)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~~~~~I~~------------------~w~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (1067)
+........ .....+......+.. ..... ........+........ ...+...
T Consensus 76 ~~~~~~~~i-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 147 (271)
T d1rkqa_ 76 QKAADGSTV-AQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVF-------CEAEKMD 147 (271)
T ss_dssp EETTTCCEE-EECCBCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEE-------CCGGGSC
T ss_pred ECCCCCEEE-EEECCCHHHHHHHHHHHHHHCCEEEEEECCEEEECCCCCHHHHHHHHHHCCCCCCC-------CHHHHCC
T ss_conf 506777089-85020077888878888861640788731327740566116777777640576100-------3165507
Q ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHHH-CCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCC
Q ss_conf 57934899992299805789999999980-48928999840890389801899989999999999199745379983678
Q 001492 916 SSNAHCISYLIKDPSKARRIDDLRQKLRM-RGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGES 994 (1067)
Q Consensus 916 ~~~~~~is~~~~~~~~~~~~~el~~~L~~-~~~~~~v~~s~~~~~ldV~P~~asKg~Alr~L~~~~gid~~~via~~GDs 994 (1067)
....+.......++. ...+..+.+.. ....+.++.+.+. ++||+|.++|||.|+++|+++++++.+++++ |||+
T Consensus 148 ~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~-~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~-~GD~ 222 (271)
T d1rkqa_ 148 PNTQFLKVMMIDEPA---ILDQAIARIPQEVKEKYTVLKSAPY-FLEILDKRVNKGTGVKSLADVLGIKPEEIMA-IGDQ 222 (271)
T ss_dssp TTCCBCEEEEECCHH---HHHHHHHHSCHHHHHHEEEEEEETT-EEEEEETTCSHHHHHHHHHHHHTCCGGGEEE-EECS
T ss_pred CCCCEEEEEEECCHH---HHHHHHHHHHHHHHCCEEEEEECCC-EEEECCCCCCCCCCCCEEHHHCCCCHHCEEE-EECC
T ss_conf 655458999946777---8999999999985056389995472-6885278887654200001100114201799-9186
Q ss_pred CCCCHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCC
Q ss_conf 99885654128860899279720253554102576788777899983550576668999999996255
Q 001492 995 GDTDYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVGK 1062 (1067)
Q Consensus 995 ~N~D~~eML~~~~~gVaMgNA~~~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g~ 1062 (1067)
.| | ++||+.++++|||+||. +++|..|+ ++|.++.++||+++|++|-+
T Consensus 223 ~N-D-~~ml~~~~~~~am~na~---~~lk~~a~---------------~i~~~~~~~Gv~~~l~~~~l 270 (271)
T d1rkqa_ 223 EN-D-IAMIEYAGVGVAVDNAI---PSVKEVAN---------------FVTKSNLEDGVAFAIEKYVL 270 (271)
T ss_dssp GG-G-HHHHHHSSEEEECTTSC---HHHHHHCS---------------EECCCTTTTHHHHHHHHHTT
T ss_pred HH-H-HHHHHHCCCEEEECCCC---HHHHHHCC---------------EECCCCCCCHHHHHHHHHHC
T ss_conf 76-7-99998589189967987---99998589---------------88388985839999999847
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.98 E-value=6.3e-31 Score=220.21 Aligned_cols=241 Identities=15% Similarity=0.160 Sum_probs=163.7
Q ss_pred EEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEE
Q ss_conf 38999985799999996356899999999998247898340799987999888999998449998999779981794698
Q 001492 776 RLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMY 855 (1067)
Q Consensus 776 klilia~D~DgTl~~~~~~i~~~~~~al~~l~~~g~~g~i~~vvIaTGR~~~~l~~~l~~~gi~~~~~d~~I~~nGs~I~ 855 (1067)
|+|++ |+||||.++++.+++.++++|+++++.+ + |+|+|||++..+...+.+++.. ...+||+||+.|+
T Consensus 3 Kli~~--DlDGTL~~~~~~i~~~~~~al~~l~~~~----~--~~i~TGR~~~~~~~~~~~~~~~---~~~~I~~nGa~i~ 71 (267)
T d1nf2a_ 3 RVFVF--DLDGTLLNDNLEISEKDRRNIEKLSRKC----Y--VVFASGRMLVSTLNVEKKYFKR---TFPTIAYNGAIVY 71 (267)
T ss_dssp CEEEE--ECCCCCSCTTSCCCHHHHHHHHHHTTTS----E--EEEECSSCHHHHHHHHHHHSSS---CCCEEEGGGTEEE
T ss_pred EEEEE--ECCCCCCCCCCCCCHHHHHHHHHHHCCC----E--EEEECCCCHHHHHHHHHHHCCC---CCCEECCCCEEEE
T ss_conf 99999--1775654895944999999999997499----7--9998999858889999984656---7731136982899
Q ss_pred ECCCCCCCCCCCCCCHHHHHCC-C--------------CCC----CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0588754688677882324101-2--------------332----65026999996420135788888999983113345
Q 001492 856 YPGTYTEEGGKLFPDPDYASHI-D--------------YRW----GCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKS 916 (1067)
Q Consensus 856 ~~~~~~~~~~~~~~d~~~~~~I-~--------------~~w----~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (1067)
.+...... ... .+.++...+ . ..| ..+.+..... ......... ....+....
T Consensus 72 ~~~~~~i~-~~~-i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~~ 142 (267)
T d1nf2a_ 72 LPEEGVIL-NEK-IPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYAR-HSNVDYRVE------PNLSELVSK 142 (267)
T ss_dssp ETTTEEEE-ECC-BCHHHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHH-HTTCCEEEC------TTHHHHHHH
T ss_pred ECCCCCCC-CCC-CCHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCHHHHHHHH-HCCCCCEEC------CCHHHHHHH
T ss_conf 54666432-457-998999999999973384278740766886277488898988-607872204------768887441
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHHC-CCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCC
Q ss_conf 79348999922998057899999999804-89289998408903898018999899999999991997453799836789
Q 001492 917 SNAHCISYLIKDPSKARRIDDLRQKLRMR-GLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESG 995 (1067)
Q Consensus 917 ~~~~~is~~~~~~~~~~~~~el~~~L~~~-~~~~~v~~s~~~~~ldV~P~~asKg~Alr~L~~~~gid~~~via~~GDs~ 995 (1067)
....++.+. .+. ..++++.+.+... ...+.+..+.+. ++||+|+++|||.||++|++++|++.+++++ |||+.
T Consensus 143 ~~~~~i~~~-~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~-~~di~~~~~~K~~ai~~l~~~~~i~~~~vva-~GD~~ 216 (267)
T d1nf2a_ 143 MGTTKLLLI-DTP---ERLDELKEILSERFKDVVKVFKSFPT-YLEIVPKNVDKGKALRFLRERMNWKKEEIVV-FGDNE 216 (267)
T ss_dssp HCBSEEEEE-CCH---HHHHHHHHHHHHHHTTTSEEEEEETT-EEEEECTTCCHHHHHHHHHHHHTCCGGGEEE-EECSH
T ss_pred CCCEEEEEE-CCH---HHHHHHHHHHHHHHCCCEEEEEEECC-EEEECCCCCCHHHHHHHHHHHHCCCCCCEEE-ECCCC
T ss_conf 162378884-559---99999999998860783899996211-4565587775167899998860368220899-80884
Q ss_pred CCCHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCC
Q ss_conf 9885654128860899279720253554102576788777899983550576668999999996255
Q 001492 996 DTDYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVGK 1062 (1067)
Q Consensus 996 N~D~~eML~~~~~gVaMgNA~~~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g~ 1062 (1067)
| | ++||+.++++|||+||. +++|.+|+ ++|.++.++||+++|+++-.
T Consensus 217 N-D-~~ml~~~~~sva~~na~---~~~k~~A~---------------~i~~~~~~~Gva~~i~~ll~ 263 (267)
T d1nf2a_ 217 N-D-LFMFEEAGLRVAMENAI---EKVKEASD---------------IVTLTNNDSGVSYVLERIST 263 (267)
T ss_dssp H-H-HHHHTTCSEEEECTTSC---HHHHHHCS---------------EECCCTTTTHHHHHHTTBCB
T ss_pred C-H-HHHHHHCCCEEEECCCC---HHHHHHCC---------------EECCCCCCCHHHHHHHHHHH
T ss_conf 4-0-99998689089948998---99998589---------------88588875389999999985
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.96 E-value=2.5e-27 Score=196.30 Aligned_cols=224 Identities=14% Similarity=0.183 Sum_probs=163.9
Q ss_pred CCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCE
Q ss_conf 78389999857999999963568999999999982478983407999879998889999984499989997799817946
Q 001492 774 RRRLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGE 853 (1067)
Q Consensus 774 ~kklilia~D~DgTl~~~~~~i~~~~~~al~~l~~~g~~g~i~~vvIaTGR~~~~l~~~l~~~gi~~~~~d~~I~~nGs~ 853 (1067)
+.|+++| |+||||.+++..+++.+.++++.++++| + .|+++|||++..+..+...+++. ..+|+.||+.
T Consensus 2 miKli~~--D~DGTL~~~~~~i~~~~~~al~~l~~~g----~-~v~~~TGr~~~~~~~~~~~~~~~----~~~i~~~G~~ 70 (225)
T d1l6ra_ 2 MIRLAAI--DVDGNLTDRDRLISTKAIESIRSAEKKG----L-TVSLLSGNVIPVVYALKIFLGIN----GPVFGENGGI 70 (225)
T ss_dssp CCCEEEE--EHHHHSBCTTSCBCHHHHHHHHHHHHTT----C-EEEEECSSCHHHHHHHHHHHTCC----SCEEEGGGTE
T ss_pred CEEEEEE--ECCCCCCCCCCCCCHHHHHHHHHHHHCC----C-EEEEECCCCHHHHHHHHHHCCCC----CEEEEECCEE
T ss_conf 7089999--6588773899947999999999998779----9-89998288603269999981988----5288604169
Q ss_pred EEECCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHH
Q ss_conf 98058875468867788232410123326502699999642013578888899998311334579348999922998057
Q 001492 854 MYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKAR 933 (1067)
Q Consensus 854 I~~~~~~~~~~~~~~~d~~~~~~I~~~w~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~~~~~~~~ 933 (1067)
++.+... +...+..+.....+........... .. ..........+.. ++.
T Consensus 71 ~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~--------~~--~~~~~~~~~~~~~-~~~--- 120 (225)
T d1l6ra_ 71 MFDNDGS----------------IKKFFSNEGTNKFLEEMSKRTSMRS--------IL--TNRWREASTGFDI-DPE--- 120 (225)
T ss_dssp EECTTSC----------------EEESSCSHHHHHHHHHHTTTSSCBC--------CG--GGGGCSSSEEEBC-CGG---
T ss_pred EEECCCC----------------EEEECCHHHHHHHHHHHHHHCCCCE--------EE--CCCCEEEEECCCC-CHH---
T ss_conf 9967951----------------7873686899999999987348542--------42--0322023100235-899---
Q ss_pred HHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCEEEEEC
Q ss_conf 89999999980489289998408903898018999899999999991997453799836789988565412886089927
Q 001492 934 RIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMK 1013 (1067)
Q Consensus 934 ~~~el~~~L~~~~~~~~v~~s~~~~~ldV~P~~asKg~Alr~L~~~~gid~~~via~~GDs~N~D~~eML~~~~~gVaMg 1013 (1067)
..+.+...+.... +. +...+. .+||.|.++||+.|+++|++++|++++++++ |||+.| | ++||+.++.+|||+
T Consensus 121 ~~~~~~~~~~~~~--~~-i~~~~~-~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~-~GDs~n-D-~~m~~~a~~~vav~ 193 (225)
T d1l6ra_ 121 DVDYVRKEAESRG--FV-IFYSGY-SWHLMNRGEDKAFAVNKLKEMYSLEYDEILV-IGDSNN-D-MPMFQLPVRKACPA 193 (225)
T ss_dssp GHHHHHHHHHTTT--EE-EEEETT-EEEEEETTCSHHHHHHHHHHHTTCCGGGEEE-ECCSGG-G-HHHHTSSSEEEECT
T ss_pred HHHHHHHHHHHCC--CE-EEECCC-EEEECCCCCCHHHHHHHHHHHHCCCHHHEEE-ECCCCC-H-HHHHHHCCEEEEEC
T ss_conf 9999999874257--29-998891-7996387652278999876651002302256-448843-5-99999779089988
Q ss_pred CCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCC
Q ss_conf 97202535541025767887778999835505766689999999962555
Q 001492 1014 GVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVGKA 1063 (1067)
Q Consensus 1014 NA~~~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g~~ 1063 (1067)
||. ++++..|+ |+++.+..+||+++|++|+++
T Consensus 194 na~---~~~k~~ad---------------~v~~~~~~~gi~~~l~~~~l~ 225 (225)
T d1l6ra_ 194 NAT---DNIKAVSD---------------FVSDYSYGEEIGQIFKHFELM 225 (225)
T ss_dssp TSC---HHHHHHCS---------------EECSCCTTHHHHHHHHHTTCC
T ss_pred CCC---HHHHHHCC---------------EEECCCCCCHHHHHHHHHCCC
T ss_conf 975---99998499---------------998989848899999986789
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.95 E-value=1.5e-27 Score=197.71 Aligned_cols=242 Identities=15% Similarity=0.131 Sum_probs=157.5
Q ss_pred EEEEEEEECCCCCC-CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCC--CCCCEEEECCCC
Q ss_conf 38999985799999-996356899999999998247898340799987999888999998449998--999779981794
Q 001492 776 RLIVIALDCYDSKG-APDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEA--NEFDALICSSGG 852 (1067)
Q Consensus 776 klilia~D~DgTl~-~~~~~i~~~~~~al~~l~~~g~~g~i~~vvIaTGR~~~~l~~~l~~~gi~~--~~~d~~I~~nGs 852 (1067)
|++++ |+||||. +++..+++.++++|++++++| + .|+|+|||++..+..++.++++.. ......|+.||+
T Consensus 11 kli~~--DlDGTLl~~~~~~i~~~~~~al~~l~~~G----i-~v~i~TGR~~~~~~~~~~~l~~~~~~~~~~~~i~~~g~ 83 (283)
T d2b30a1 11 KLLLI--DFDGTLFVDKDIKVPSENIDAIKEAIEKG----Y-MVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGT 83 (283)
T ss_dssp CEEEE--ETBTTTBCCTTTCSCHHHHHHHHHHHHHT----C-EEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGT
T ss_pred CEEEE--ECCCCCCCCCCCCCCHHHHHHHHHHHHCC----C-EEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
T ss_conf 19999--88888848989967999999999999889----9-89998699989999999984766545557743787545
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHH---CCC-CCC-------CC---------CCCCCCCCC
Q ss_conf 6980588754688677882324101233265026999996420---135-788-------88---------899998311
Q 001492 853 EMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMN---TTE-GGE-------NS---------KNSSSPIQE 912 (1067)
Q Consensus 853 ~I~~~~~~~~~~~~~~~d~~~~~~I~~~w~~~~l~~~l~~~~~---~~~-~~~-------~~---------~~~~~~~~~ 912 (1067)
.+|........ ....+......+ + ..+..... ... ... .. .........
T Consensus 84 ~~~~~~~~~~~--~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (283)
T d2b30a1 84 IVYDQIGYTLL--DETIETDVYAEL--------I-SYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIR 152 (283)
T ss_dssp EEECTTCCEEE--ECCCCHHHHHHH--------H-HHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEEC
T ss_pred EEECCCCCEEE--ECCCCHHHHHHH--------H-HHHHHHCCCCEEEEEECCEEEEECCCHHHHHHHHHHHCCCCCCCC
T ss_conf 89848996831--025687888999--------9-887750665158997323068704632778888874116553366
Q ss_pred ---CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHH-CCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEE
Q ss_conf ---33457934899992299805789999999980-48928999840890389801899989999999999199745379
Q 001492 913 ---DQKSSNAHCISYLIKDPSKARRIDDLRQKLRM-RGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMF 988 (1067)
Q Consensus 913 ---~~~~~~~~~is~~~~~~~~~~~~~el~~~L~~-~~~~~~v~~s~~~~~ldV~P~~asKg~Alr~L~~~~gid~~~vi 988 (1067)
........++.+.. +.. ..+.+...+.. ....+.+..+... ++||.|.++||+.|+++|+++++++.++++
T Consensus 153 ~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~K~~~l~~l~~~~~i~~~~vi 227 (283)
T d2b30a1 153 HNEMLKYRTMNKLMIVL-DPS---ESKTVIGNLKQKFKNKLTIFTTYNG-HAEVTKLGHDKYTGINYLLKHYNISNDQVL 227 (283)
T ss_dssp HHHHTTCCCCSEEEECC-CTT---THHHHHHHHHHHSTTTEEEEECTTS-CEEEEETTCCHHHHHHHHHHHTTCCGGGEE
T ss_pred HHHHHHCCCCEEEEEEC-CHH---HHHHHHHHHHHHHCCCCEEEEECCE-EEEECCCCCHHHHHHHHHHHHCCCCCCEEE
T ss_conf 77774026613899966-889---9999999999984566137885240-676247765057788877664100202079
Q ss_pred EEECCCCCCCHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCC-CHHHHHHHHHHHC
Q ss_conf 983678998856541288608992797202535541025767887778999835505766-6899999999625
Q 001492 989 VILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANA-KVDEIANALRQVG 1061 (1067)
Q Consensus 989 a~~GDs~N~D~~eML~~~~~gVaMgNA~~~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~-~~dgI~~al~~~g 1061 (1067)
+ |||+.| | ++||+.+++||||+||. +++|.+|+ ++|+.+ .++||+++|+++-
T Consensus 228 ~-~GD~~N-D-~~Ml~~a~~~va~~na~---~~~k~~a~---------------~v~~~~~~~g~v~~~l~~~~ 280 (283)
T d2b30a1 228 V-VGDAEN-D-IAMLSNFKYSFAVANAT---DSAKSHAK---------------CVLPVSHREGAVAYLLKKVF 280 (283)
T ss_dssp E-EECSGG-G-HHHHHSCSEEEECTTCC---HHHHHHSS---------------EECSSCTTTTHHHHHHHHHH
T ss_pred E-ECCCHH-H-HHHHHHCCCEEEECCCC---HHHHHHCC---------------EEECCCCCCCHHHHHHHHHH
T ss_conf 9-648763-6-99998589189968998---99998489---------------99998488869999999997
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.95 E-value=2.5e-27 Score=196.25 Aligned_cols=221 Identities=9% Similarity=0.041 Sum_probs=155.8
Q ss_pred EEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEE
Q ss_conf 38999985799999996356899999999998247898340799987999888999998449998999779981794698
Q 001492 776 RLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMY 855 (1067)
Q Consensus 776 klilia~D~DgTl~~~~~~i~~~~~~al~~l~~~g~~g~i~~vvIaTGR~~~~l~~~l~~~gi~~~~~d~~I~~nGs~I~ 855 (1067)
|+++| |+||||.+++..+++.++++|+++++.| + .|+++|||++..+..++..+++ .+.+|+.||+.++
T Consensus 3 K~i~~--D~DGTL~~~~~~i~~~~~~~l~~l~~~g----i-~v~~~TGR~~~~~~~~~~~~~~----~~~~i~~~g~~~~ 71 (230)
T d1wr8a_ 3 KAISI--DIDGTITYPNRMIHEKALEAIRRAESLG----I-PIMLVTGNTVQFAEAASILIGT----SGPVVAEDGGAIS 71 (230)
T ss_dssp CEEEE--ESTTTTBCTTSCBCHHHHHHHHHHHHTT----C-CEEEECSSCHHHHHHHHHHHTC----CSCEEEGGGTEEE
T ss_pred EEEEE--ECCCCCCCCCCCCCHHHHHHHHHHHHCC----C-EEEEEECCCHHHHHHHHHHCCC----CCCCCCCCCEEEE
T ss_conf 69999--1677773798946999999999998679----9-5999927868889999986488----7320012220100
Q ss_pred ECCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHH
Q ss_conf 05887546886778823241012332650269999964201357888889999831133457934899992299805789
Q 001492 856 YPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRI 935 (1067)
Q Consensus 856 ~~~~~~~~~~~~~~d~~~~~~I~~~w~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~~~~~~~~~~ 935 (1067)
+...... ....+..+. ........++....... .. .....+.+ ........
T Consensus 72 ~~~~~~~---~~~~~~~~~----------~~~~~~~~~~~~~~~~~----------~~---~~~~~~~~-~~~~~~~~-- 122 (230)
T d1wr8a_ 72 YKKKRIF---LASMDEEWI----------LWNEIRKRFPNARTSYT----------MP---DRRAGLVI-MRETINVE-- 122 (230)
T ss_dssp ETTEEEE---SCCCSHHHH----------HHHHHHHHCTTCCBCTT----------GG---GCSSCEEE-CTTTSCHH--
T ss_pred CCCCCCC---CCCCCHHHH----------HHHHHHHHCCCCCCEEE----------CC---CCEEEEEE-ECCCCCHH--
T ss_conf 2421000---234418899----------99999986266542144----------14---42245899-34611699--
Q ss_pred HHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCEEEEECCC
Q ss_conf 99999998048928999840890389801899989999999999199745379983678998856541288608992797
Q 001492 936 DDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGV 1015 (1067)
Q Consensus 936 ~el~~~L~~~~~~~~v~~s~~~~~ldV~P~~asKg~Alr~L~~~~gid~~~via~~GDs~N~D~~eML~~~~~gVaMgNA 1015 (1067)
.+++.+......+.. ...+ ..+||+|.++||+.|++++++++|++++++++ |||+.| | ++||+.++.+|||+||
T Consensus 123 -~~~~~~~~~~~~~~~-~~~~-~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~-iGD~~N-D-i~ml~~ag~~vav~na 196 (230)
T d1wr8a_ 123 -TVREIINELNLNLVA-VDSG-FAIHVKKPWINKGSGIEKASEFLGIKPKEVAH-VGDGEN-D-LDAFKVVGYKVAVAQA 196 (230)
T ss_dssp -HHHHHHHHTTCSCEE-EECS-SCEEEECTTCCHHHHHHHHHHHHTSCGGGEEE-EECSGG-G-HHHHHHSSEEEECTTS
T ss_pred -HHHHHHHHHCCCEEE-EECC-CEEEEEECCCCCCHHHCCCCCCCCCCHHHEEE-EECCCC-H-HHHHHHCCEEEEECCC
T ss_conf -999999983665289-6089-48999407767613320112110013324256-626730-7-9999978907998898
Q ss_pred CCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHH
Q ss_conf 202535541025767887778999835505766689999999962
Q 001492 1016 VEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQV 1060 (1067)
Q Consensus 1016 ~~~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~ 1060 (1067)
. +++|.+|+ +|+.+..++||.++++++
T Consensus 197 ~---~~~k~~A~---------------~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 197 P---KILKENAD---------------YVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp C---HHHHTTCS---------------EECSSCHHHHHHHHHHHH
T ss_pred C---HHHHHHCC---------------EEECCCCCCHHHHHHHHH
T ss_conf 7---99998579---------------998999847899999999
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.94 E-value=1.9e-25 Score=183.73 Aligned_cols=193 Identities=26% Similarity=0.265 Sum_probs=152.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCC-CCCCHHHHHHHHHHCCCC
Q ss_conf 9889996578999754221111247888999998612357665311699985899970899-999999999999750134
Q 001492 430 GMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPD-PKKNITTLLKAFGECRPL 508 (1067)
Q Consensus 430 GiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRl~-~~Kgi~~ll~A~~~l~~l 508 (1067)
|||.+.|.+.... ..........+.++.. +++++|+++||+. ++||++.+++|+..+...
T Consensus 1 gid~~~~~~~~~~------------------~~~~~~~~~~~~~~~l-~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~ 61 (196)
T d2bfwa1 1 GIDCSFWNESYLT------------------GSRDERKKSLLSKFGM-DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSK 61 (196)
T ss_dssp CCCTTTSSGGGSC------------------SCHHHHHHHHHHHTTC-CSCEEEEEESCBCSSSSCHHHHHHHHHHHTTS
T ss_pred CCCHHHCCCCCCC------------------CHHHHHHHHHHHHHCC-CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCC
T ss_conf 9181330898887------------------0168999999999597-99988999768881104999999998864112
Q ss_pred CCCCCEEE-EEECCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCH
Q ss_conf 69995999-99328992454106558999999999762999968939999989999999971318939994499898878
Q 001492 509 RELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGL 587 (1067)
Q Consensus 509 ~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dv~~ly~~A~~~~dV~i~ps~~Egfgl 587 (1067)
...+++.+ |+|.++.. +...+..+...+ ...+.+.+.++.+++..+|+.| |++|+|+..|+||+
T Consensus 62 ~~~~~~~l~i~G~g~~~---------~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~----di~v~ps~~e~~~~ 126 (196)
T d2bfwa1 62 KEFQEMRFIIIGKGDPE---------LEGWARSLEEKH--GNVKVITEMLSREFVRELYGSV----DFVIIPSYFEPFGL 126 (196)
T ss_dssp GGGGGEEEEEECCBCHH---------HHHHHHHHHHHC--TTEEEECSCCCHHHHHHHHTTC----SEEEECCSCCSSCH
T ss_pred CCCCCEEEEEEEECCCC---------HHHHHHHHHHCC--CEEEEEEECCCCCCCHHCCCCC----CCCCCCCCCCCCCC
T ss_conf 57888189999613552---------134543322113--1157753023321100001232----33443222112332
Q ss_pred HHHHHHHCCCCEEECCCCCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999984997999288770110014886699499999999999999631-99999999999989997099
Q 001492 588 TLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVS-EKNLWVECRKNGWKNIHLFS 657 (1067)
Q Consensus 588 tllEAmA~G~PVIat~~Gg~~eii~~~~~Gllv~p~d~~~la~aL~~ll~-d~~~~~~~~~~a~~~v~~fs 657 (1067)
+++|||+||+|||+++.|+..|++.+ .+|++++|.|+++++++|.+++. +++.+.+++++++++++.||
T Consensus 127 ~~~Eam~~G~pvI~~~~~~~~e~i~~-~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~fs 196 (196)
T d2bfwa1 127 VALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFS 196 (196)
T ss_dssp HHHHHHHTTCEEEEESCHHHHHHCCT-TTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHCCCEEEECCCCCCCEEECC-CCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
T ss_conf 20133314860465178853201028-73146789999999999999995799999999999999998378
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.92 E-value=4.5e-24 Score=174.60 Aligned_cols=217 Identities=13% Similarity=0.121 Sum_probs=131.7
Q ss_pred CEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEE
Q ss_conf 83899998579999999635689999999999824789834079998799988899999844999899977998179469
Q 001492 775 RRLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEM 854 (1067)
Q Consensus 775 kklilia~D~DgTl~~~~~~i~~~~~~al~~l~~~g~~g~i~~vvIaTGR~~~~l~~~l~~~gi~~~~~d~~I~~nGs~I 854 (1067)
.|++|+ |+|||+.++. .++.++++|++++++| + .|++||||++..+..++..+++. +.+||+||+.+
T Consensus 2 iKli~~--DlDGTLl~~~--~~~~~~~ai~~l~~~G----~-~~~~aTGR~~~~~~~~~~~~~~~----~~~i~~nGa~i 68 (243)
T d1wzca1 2 IRLIFL--DIDKTLIPGY--EPDPAKPIIEELKDMG----F-EIIFNSSKTRAEQEYYRKELEVE----TPFISENGSAI 68 (243)
T ss_dssp EEEEEE--CCBTTTBSSS--CSGGGHHHHHHHHHTT----E-EEEEECSSCHHHHHHHHHHHTCC----SCEEETTTTEE
T ss_pred CEEEEE--ECCCCCCCCC--CCHHHHHHHHHHHHCC----C-EEEEEECCCHHHHHHHHHHHCCC----CCCCCCCCCEE
T ss_conf 379999--2777778999--8889999999999889----9-99999198889999999983644----21001478489
Q ss_pred EECCCCCCCCCCCCCCHHHHHCCC-----CCCCCCHHHHHHHHHHHCCCCCCCCCC---------CCCCCCCCCCCCCCE
Q ss_conf 805887546886778823241012-----332650269999964201357888889---------999831133457934
Q 001492 855 YYPGTYTEEGGKLFPDPDYASHID-----YRWGCDGLKKTIWKLMNTTEGGENSKN---------SSSPIQEDQKSSNAH 920 (1067)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~~~~~I~-----~~w~~~~l~~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~ 920 (1067)
+++..... .+..+..... .....+.+...+............... ..............+
T Consensus 69 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (243)
T d1wzca1 69 FIPKGYFP------FDVKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREY 142 (243)
T ss_dssp EECTTCCC----------------CEEEECSCCHHHHHHHHHHHHHHHTCBCGGGSCHHHHHHHHCCCGGGHHHHTCCSS
T ss_pred ECCCCCEE------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
T ss_conf 70898430------354306778899998752199999999765531121003134488887762476467788886313
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHH-CCCCCCEEEEECCCCCCCH
Q ss_conf 899992299805789999999980489289998408903898018999899999999991-9974537998367899885
Q 001492 921 CISYLIKDPSKARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRW-RLNVANMFVILGESGDTDY 999 (1067)
Q Consensus 921 ~is~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~ldV~P~~asKg~Alr~L~~~~-gid~~~via~~GDs~N~D~ 999 (1067)
.......... .+........ + ..+.+. .++++|.+++|+.|++++++++ +++.+++++ |||+.| |
T Consensus 143 ~~~~~~~~~~------~~~~~~~~~~--~--~~~~~~-~~~~~~~~~~K~~al~~l~~~~~~~~~~~~~a-~GD~~N-D- 208 (243)
T d1wzca1 143 SETIFEWSRD------GWEEVLVEGG--F--KVTMGS-RFYTVHGNSDKGKAAKILLDFYKRLGQIESYA-VGDSYN-D- 208 (243)
T ss_dssp EEEECBCSSS------CHHHHHHHTT--C--EEEECS-SSEEEECSCCHHHHHHHHHHHHHTTSCEEEEE-EECSGG-G-
T ss_pred CHHHHHHHHH------HHHHHHHHCC--E--EEEECC-CCCCHHHHHCCHHHHHHHHHHHCCCCCCCEEE-ECCCHH-H-
T ss_conf 4113444467------8998655237--6--884236-53001031100779999999835999141999-849885-8-
Q ss_pred HHHHCCCCEEEEECCCCCCCHHHHHCCC
Q ss_conf 6541288608992797202535541025
Q 001492 1000 EELISGAHKTLIMKGVVEKGSEELLRTT 1027 (1067)
Q Consensus 1000 ~eML~~~~~gVaMgNA~~~~~~~~~~a~ 1027 (1067)
++||+.++++||||||. .+.+.+++
T Consensus 209 ~~Ml~~a~~~va~~Na~---~~~~~~~~ 233 (243)
T d1wzca1 209 FPMFEVVDKVFIVGSLK---HKKAQNVS 233 (243)
T ss_dssp HHHHTTSSEEEEESSCC---CTTCEEES
T ss_pred HHHHHCCCCEEEECCCC---HHHHHHHH
T ss_conf 99998499389927998---68870231
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=9e-24 Score=172.59 Aligned_cols=213 Identities=13% Similarity=0.129 Sum_probs=127.9
Q ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEECC
Q ss_conf 99985799999996356899999999998247898340799987999888999998449998999779981794698058
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~D~DgTl~~~~~~i~~~~~~al~~l~~~g~~g~i~~vvIaTGR~~~~l~~~l~~~gi~~~~~d~~I~~nGs~I~~~~ 858 (1067)
++++|+||||.++++.+++.+++++++++++| + .|++||||++.++.+++.++++. ...+||+||+.++...
T Consensus 6 li~~DlDGTLl~~~~~i~~~~~~al~~l~~~G----i-~~~i~TGR~~~~~~~~~~~~~~~---~~~~i~~nGa~i~~~~ 77 (232)
T d1xvia_ 6 LVFSDLDGTLLDSHSYDWQPAAPWLTRLREAN----V-PVILCSSKTSAEMLYLQKTLGLQ---GLPLIAENGAVIQLAE 77 (232)
T ss_dssp EEEEECTTTTSCSSCCSCCTTHHHHHHHHHTT----C-CEEEECSSCHHHHHHHHHHTTCT---TSCEEEGGGTEEECCT
T ss_pred EEEEECCCCCCCCCCCCCHHHHHHHHHHHHCC----C-EEEEEECCCHHHCHHHHHHHCCC---CCEEECCCCEEEEECC
T ss_conf 99997888752896947999999999999779----9-89999689736530688873457---8459716976999357
Q ss_pred CCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCC---CCCC--------CCCCCCCCCCCCCCEEEEEEEC
Q ss_conf 8754688677882324101233265026999996420135788---8889--------9998311334579348999922
Q 001492 859 TYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGE---NSKN--------SSSPIQEDQKSSNAHCISYLIK 927 (1067)
Q Consensus 859 ~~~~~~~~~~~d~~~~~~I~~~w~~~~l~~~l~~~~~~~~~~~---~~~~--------~~~~~~~~~~~~~~~~is~~~~ 927 (1067)
.... ...+...+... ....+............... .... ..............+.......
T Consensus 78 ~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (232)
T d1xvia_ 78 QWQE-------IDGFPRIISGI-SHGEISLVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWR 149 (232)
T ss_dssp TCTT-------STTTTEEECSS-CHHHHHHHHHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEEC
T ss_pred CCCC-------CCHHHHHHHHH-HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCEEEEECCC
T ss_conf 7531-------20145555577-899998765422222021212332023555433310230134554411124531022
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHH---HCCCCCCEEEEECCCCCCCHHHHHC
Q ss_conf 9980578999999998048928999840890389801899989999999999---1997453799836789988565412
Q 001492 928 DPSKARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVR---WRLNVANMFVILGESGDTDYEELIS 1004 (1067)
Q Consensus 928 ~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~ldV~P~~asKg~Alr~L~~~---~gid~~~via~~GDs~N~D~~eML~ 1004 (1067)
.. ......+........ . ...... ..++++|.+++|+.|+++|++. +|++.+++++ |||+.| | ++||+
T Consensus 150 -~~-~~~~~~~~~~~~~~~--~-~~~~~~-~~~~~~~~~~~K~~~~~~l~~~~~~l~i~~~~~ia-fGD~~N-D-l~Ml~ 220 (232)
T d1xvia_ 150 -DS-DERMAQFTARLNELG--L-QFMQGA-RFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLG-LGDGPN-D-APLLE 220 (232)
T ss_dssp -SC-HHHHHHHHHHHHHTT--E-EEEECS-SCEEEEETTCCHHHHHHHHHHHHHHHHSSCCEEEE-EESSGG-G-HHHHH
T ss_pred -CC-HHHHHHHHHHHHHCC--C-EEEECC-CEEECCCCCCHHHHHHHHHHHHHHHCCCCHHCEEE-ECCCHH-H-HHHHH
T ss_conf -52-999988998765305--5-033225-30221478851789999999999975989521999-849786-8-99998
Q ss_pred CCCEEEEECCCC
Q ss_conf 886089927972
Q 001492 1005 GAHKTLIMKGVV 1016 (1067)
Q Consensus 1005 ~~~~gVaMgNA~ 1016 (1067)
.+++||||+||-
T Consensus 221 ~a~~~vaV~n~~ 232 (232)
T d1xvia_ 221 VMDYAVIVKGLN 232 (232)
T ss_dssp TSSEEEECCCCC
T ss_pred HCCEEEEEECCC
T ss_conf 199089971899
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.89 E-value=7.7e-24 Score=173.06 Aligned_cols=216 Identities=13% Similarity=0.091 Sum_probs=124.1
Q ss_pred EEEEEEECCCCCCC----C-CHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCC
Q ss_conf 89999857999999----9-635689999999999824789834079998799988899999844999899977998179
Q 001492 777 LIVIALDCYDSKGA----P-DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSG 851 (1067)
Q Consensus 777 lilia~D~DgTl~~----~-~~~i~~~~~~al~~l~~~g~~g~i~~vvIaTGR~~~~l~~~l~~~gi~~~~~d~~I~~nG 851 (1067)
|||| |+||||.+ + .+.+++.++++|+++++. + .|+|+|||++..+..... .++.++|+||
T Consensus 2 Li~~--DlDGTL~~~~~~~~~~~i~~~~~~~l~~l~~~-----~-~v~i~TGR~~~~l~~~~~-------~~~~~~~~ng 66 (229)
T d1u02a_ 2 LIFL--DYDGTLVPIIMNPEESYADAGLLSLISDLKER-----F-DTYIVTGRSPEEISRFLP-------LDINMICYHG 66 (229)
T ss_dssp EEEE--ECBTTTBCCCSCGGGCCCCHHHHHHHHHHHHH-----S-EEEEECSSCHHHHHHHSC-------SSCEEEEGGG
T ss_pred EEEE--EECCCCCCCCCCHHHCCCCHHHHHHHHHHHHC-----C-CEEEECCCCHHHHHHHCC-------CCCCEEECCE
T ss_conf 8999--95577789978965488999999999998509-----9-789996998799664347-------6662896470
Q ss_pred CEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC-
Q ss_conf 4698058875468867788232410123326502699999642013578888899998311334579348999922998-
Q 001492 852 GEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPS- 930 (1067)
Q Consensus 852 s~I~~~~~~~~~~~~~~~d~~~~~~I~~~w~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~~~~~- 930 (1067)
+.++..+..... .....+..+.. .+...+..+....... . .....+...+++....
T Consensus 67 ~~~~~~~~~~~~-~~~~~~~~~~~---------~i~~~~~~~~~~~~~~---------~----~~~~~~~~~~~~~~~~~ 123 (229)
T d1u02a_ 67 ACSKINGQIVYN-NGSDRFLGVFD---------RIYEDTRSWVSDFPGL---------R----IYRKNLAVLYHLGLMGA 123 (229)
T ss_dssp TEEEETTEEEEC-TTGGGGHHHHH---------HHHHHHTTHHHHSTTC---------E----EEEETTEEEEECTTSCS
T ss_pred EEEECCCCEEEE-CCHHHHHHHHH---------HHHHHHHHHHCCCCCC---------E----ECCCCCCEEEEEHHHHH
T ss_conf 898349934662-33054499999---------9999867765066772---------1----03554213422033324
Q ss_pred --CHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCE
Q ss_conf --057899999999804892899984089038980189998999999999919974537998367899885654128860
Q 001492 931 --KARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHK 1008 (1067)
Q Consensus 931 --~~~~~~el~~~L~~~~~~~~v~~s~~~~~ldV~P~~asKg~Alr~L~~~~gid~~~via~~GDs~N~D~~eML~~~~~ 1008 (1067)
.....+.+...+..... .+.+.. .++||+|+++|||.||++|+.+ +++++ |||+.| | ++||+.++.
T Consensus 124 ~~~~~~~~~l~~~~~~~~~---~~~~~~-~~idi~p~g~~Kg~al~~l~~~-----~~~i~-~GDs~N-D-~~Mf~~~~~ 191 (229)
T d1u02a_ 124 DMKPKLRSRIEEIARIFGV---ETYYGK-MIIELRVPGVNKGSAIRSVRGE-----RPAII-AGDDAT-D-EAAFEANDD 191 (229)
T ss_dssp TTHHHHHHHHHHHHHHHTC---EEEECS-SEEEEECTTCCHHHHHHHHHTT-----SCEEE-EESSHH-H-HHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHCCCE---EEEEEC-EEEEEECCCCCHHHHHHHHHCC-----CCCEE-ECCCCC-H-HHHHHCCCC
T ss_conf 4579999999998523876---999602-1899736989889999997440-----44566-438887-0-999960288
Q ss_pred EEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCH-HHHHHHHHHHCC
Q ss_conf 899279720253554102576788777899983550576668-999999996255
Q 001492 1009 TLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKV-DEIANALRQVGK 1062 (1067)
Q Consensus 1009 gVaMgNA~~~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~-dgI~~al~~~g~ 1062 (1067)
|++|+|+. . +.+|. |.+.++.+ .++.+.|.++++
T Consensus 192 ~~av~~g~---~--~~~A~---------------~~~~~~~ev~~~l~~l~~~~~ 226 (229)
T d1u02a_ 192 ALTIKVGE---G--ETHAK---------------FHVADYIEMRKILKFIEMLGV 226 (229)
T ss_dssp SEEEEESS---S--CCCCS---------------EEESSHHHHHHHHHHHHHHHH
T ss_pred EEEEEECC---C--CCCCE---------------EECCCHHHHHHHHHHHHHHHH
T ss_conf 28999689---8--76672---------------875999999999999999986
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.88 E-value=5.4e-22 Score=160.79 Aligned_cols=157 Identities=25% Similarity=0.318 Sum_probs=125.3
Q ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCEEECCCC
Q ss_conf 99858999708999999999999997501346999599999328992454106558999999999762999968939999
Q 001492 478 PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHH 557 (1067)
Q Consensus 478 ~~~~~Il~vgRl~~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~ 557 (1067)
.....++++||+.+.||++.+++|+..++. ..+ +|+|.+.+.+. ...+.+.+.... .++|.|+|++
T Consensus 10 ~~~~~~l~iGrl~~~K~~~~~i~a~~~l~~----~~l-~ivg~~~~~~~--------~~~~~~~~~~~~-~~~v~~~g~~ 75 (166)
T d2f9fa1 10 CYGDFWLSVNRIYPEKRIELQLEVFKKLQD----EKL-YIVGWFSKGDH--------AERYARKIMKIA-PDNVKFLGSV 75 (166)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHCTT----SCE-EEEBCCCTTST--------HHHHHHHHHHHS-CTTEEEEESC
T ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHHHCC----CEE-EEEEECCCCCC--------HHHHHHHHCCCC-CCCEEEEECC
T ss_conf 999999999237543499999999998339----749-99972244542--------233332202356-6758874212
Q ss_pred CCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHC
Q ss_conf 98999999997131893999449989887899999984997999288770110014886699499999999999999631
Q 001492 558 KQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVS 637 (1067)
Q Consensus 558 ~~~dv~~ly~~A~~~~dV~i~ps~~EgfgltllEAmA~G~PVIat~~Gg~~eii~~~~~Gllv~p~d~~~la~aL~~ll~ 637 (1067)
+.+++..+|+.| |++++||..|+||++++|||++|+|||+++.|+..|++.++.+|+++++ |+++++++|.++++
T Consensus 76 ~~~~~~~~~~~a----d~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~~~-d~~~~~~~i~~l~~ 150 (166)
T d2f9fa1 76 SEEELIDLYSRC----KGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNA-DVNEIIDAMKKVSK 150 (166)
T ss_dssp CHHHHHHHHHHC----SEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEECS-CHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCC-CHHHHHHHHHHHHH
T ss_conf 211122222222----2233212211233221101122332205527864033048841246899-99999999999980
Q ss_pred CHHHHHHHHHHHHHHHHCC
Q ss_conf 9999999999998999709
Q 001492 638 EKNLWVECRKNGWKNIHLF 656 (1067)
Q Consensus 638 d~~~~~~~~~~a~~~v~~f 656 (1067)
+++. +++++.+.+++|
T Consensus 151 ~~~~---~~~~~~~~a~~f 166 (166)
T d2f9fa1 151 NPDK---FKKDCFRRAKEF 166 (166)
T ss_dssp CTTT---THHHHHHHHHTC
T ss_pred CHHH---HHHHHHHHHHCC
T ss_conf 9999---999999998579
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=2.9e-22 Score=162.58 Aligned_cols=217 Identities=11% Similarity=0.039 Sum_probs=120.9
Q ss_pred EEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHH-CCCCCCCCCEEEECCCCEE
Q ss_conf 389999857999999963568999999999982478983407999879998889999984-4999899977998179469
Q 001492 776 RLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNS-MKIEANEFDALICSSGGEM 854 (1067)
Q Consensus 776 klilia~D~DgTl~~~~~~i~~~~~~al~~l~~~g~~g~i~~vvIaTGR~~~~l~~~l~~-~gi~~~~~d~~I~~nGs~I 854 (1067)
-|++| |+||||+++++.+++.++++|++++++| + ++++|||.+..+...+.+ +++. ..+..++|.+|+.+
T Consensus 2 ~i~lF--DlDGTLl~~~~~is~~~~~~i~~l~~~g----~--~~i~tgrr~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~ 72 (244)
T d2fuea1 2 VLCLF--DVDGTLTPARQKIDPEVAAFLQKLRSRV----Q--IGVVGGSDYCKIAEQLGDGDEVI-EKFDYVFAENGTVQ 72 (244)
T ss_dssp EEEEE--ESBTTTBSTTSCCCHHHHHHHHHHTTTS----E--EEEECSSCHHHHHHHHSSTTTHH-HHCSEEEEGGGTEE
T ss_pred EEEEE--CCCCCCCCCCCCCCHHHHHHHHHHHHCC----C--EEEEECCCHHHHHHHHHHHHCCC-CCCCEEECCCCEEE
T ss_conf 79998--4456834998958999999999998689----9--99996698065134566542334-55422311440023
Q ss_pred EECCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC--CCH
Q ss_conf 805887546886778823241012332650269999964201357888889999831133457934899992299--805
Q 001492 855 YYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDP--SKA 932 (1067)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~~~~~I~~~w~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~~~~--~~~ 932 (1067)
+...... ....+...+........................ ...... .......+..... ...
T Consensus 73 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~-~~~~~~~~~~~~~~~~~~ 136 (244)
T d2fuea1 73 YKHGRLL-------SKQTIQNHLGEELLQDLINFCLSYMALLRLPKK--------RGTFIE-FRNGMLNISPIGRSCTLE 136 (244)
T ss_dssp EETTEEC-------CCCCHHHHHCHHHHHHHHHHHHHHHHTCCCSCC--------CSCSEE-ECSSCEEECSSCTTCCHH
T ss_pred CCCCCCC-------EEECHHHHHHHHHHHHHHHHHHHHHHEECCCCC--------CCCHHH-HHHHHHHCCCCCCCCCHH
T ss_conf 0378512-------120135777666777777642333101102211--------242123-444442023223332034
Q ss_pred HH------------HHHHHHHHH-HC-CCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCC----
Q ss_conf 78------------999999998-04-8928999840890389801899989999999999199745379983678----
Q 001492 933 RR------------IDDLRQKLR-MR-GLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGES---- 994 (1067)
Q Consensus 933 ~~------------~~el~~~L~-~~-~~~~~v~~s~~~~~ldV~P~~asKg~Alr~L~~~~gid~~~via~~GDs---- 994 (1067)
.. ..+....+. .. .....+..+.. .++||+|+++|||.||++|++ ++.+++++ |||+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lei~~~~vsKg~al~~L~~---~~~~ev~a-fGD~~~~G 211 (244)
T d2fuea1 137 ERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGM-ISFDVFPEGWDKRYCLDSLDQ---DSFDTIHF-FGNETSPG 211 (244)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHTTTSCEEEECCSS-SCEEEEETTCSTTHHHHHHTT---SCCSEEEE-EESCCSTT
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEECCC-CCCEECCHHCCHHHHHHHHHC---CCHHHEEE-ECCCCCCC
T ss_conf 54566653001036788899999885103426764167-600320322027899999966---98445999-86889999
Q ss_pred CCCCHHHHHCCCC-EEEEECCCCCCCHHHHHCCC
Q ss_conf 9988565412886-08992797202535541025
Q 001492 995 GDTDYEELISGAH-KTLIMKGVVEKGSEELLRTT 1027 (1067)
Q Consensus 995 ~N~D~~eML~~~~-~gVaMgNA~~~~~~~~~~a~ 1027 (1067)
+| | ++||+.++ .|+||+||. +++|..++
T Consensus 212 ~N-D-~eml~~a~~~~~av~na~---~~~k~~~~ 240 (244)
T d2fuea1 212 GN-D-FEIFADPRTVGHSVVSPQ---DTVQRCRE 240 (244)
T ss_dssp ST-T-HHHHHSTTSEEEECSSHH---HHHHHHHH
T ss_pred CC-C-HHHHHCCCCCEEECCCHH---HHHHHHHH
T ss_conf 97-2-999971798589918989---99999998
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=8.3e-21 Score=152.87 Aligned_cols=205 Identities=14% Similarity=0.126 Sum_probs=116.1
Q ss_pred CEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEE
Q ss_conf 83899998579999999635689999999999824789834079998799988899999844999899977998179469
Q 001492 775 RRLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEM 854 (1067)
Q Consensus 775 kklilia~D~DgTl~~~~~~i~~~~~~al~~l~~~g~~g~i~~vvIaTGR~~~~l~~~l~~~gi~~~~~d~~I~~nGs~I 854 (1067)
.||++| |+||||+++++.+++.++++|++++++| + ++++|||++..+...+...... .+.++++.+|+.+
T Consensus 3 ~kl~~f--DlDGTLl~~~~~i~~~~~~al~~l~~~g----~--~~i~Tgr~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 72 (243)
T d2amya1 3 PALCLF--DVDGTLTAPRQKITKEMDDFLQKLRQKI----K--IGVVGGSDFEKVQEQLGNDVVE--KYDYVFPENGLVA 72 (243)
T ss_dssp SEEEEE--ESBTTTBCTTSCCCHHHHHHHHHHTTTS----E--EEEECSSCHHHHHHHHCTTHHH--HCSEEESGGGTEE
T ss_pred CEEEEE--CCCCCEECCCCCCCHHHHHHHHHHHCCC----C--EEEECCCCHHHHHHHHHHHCCC--CCEEEECCCEEEE
T ss_conf 879998--6747820899948999999999998099----8--9999589868867887652165--6429952747999
Q ss_pred EECCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHH----HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC-
Q ss_conf 80588754688677882324101233265026999----9964201357888889999831133457934899992299-
Q 001492 855 YYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKT----IWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDP- 929 (1067)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~~~~~I~~~w~~~~l~~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~~~~- 929 (1067)
+..+... +...+............ +........... .......... ...+.....
T Consensus 73 ~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~--~~~~~~~~~~ 132 (243)
T d2amya1 73 YKDGKLL-----------CRQNIQSHLGEALIQDLINYCLSYIAKIKLPKK-------RGTFIEFRNG--MLNVSPIGRS 132 (243)
T ss_dssp EETTEEE-----------EECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCC-------CSCSEEEETT--EEEECSSCTT
T ss_pred ECCCCCC-----------EECCHHHHHHHHHHHHHHHHHHHHHEECCCCCC-------CCCHHHHHHH--HHCCCCCCCC
T ss_conf 3388511-----------100012888888988887640001000145312-------2202231011--2112222223
Q ss_pred -CCH------------HHHHHHHHHHHH-C-CCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECC-
Q ss_conf -805------------789999999980-4-892899984089038980189998999999999919974537998367-
Q 001492 930 -SKA------------RRIDDLRQKLRM-R-GLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGE- 993 (1067)
Q Consensus 930 -~~~------------~~~~el~~~L~~-~-~~~~~v~~s~~~~~ldV~P~~asKg~Alr~L~~~~gid~~~via~~GD- 993 (1067)
... ....+....+.. . ...+.+..+... ++||+|+++|||.||++|+ +++.+++++ |||
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lei~~~~vsKg~al~~l~---~~~~~ev~a-fGD~ 207 (243)
T d2amya1 133 CSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQI-SFDVFPDGWDKRYCLRHVE---NDGYKTIYF-FGDK 207 (243)
T ss_dssp CCHHHHHHHHHHHHHHCHHHHHHHHHHHHTTTSCEEEEEETTT-EEEEEETTCSGGGGGGGTT---TSCCSEEEE-EECS
T ss_pred CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCC-CCEEECCCCCHHHHHHHHH---CCCCCEEEE-ECCC
T ss_conf 5423301232110010335899999998713455279952896-4155132167899999984---899362999-8689
Q ss_pred ---CCCCCHHHHHCCCC-EEEEECCCC
Q ss_conf ---89988565412886-089927972
Q 001492 994 ---SGDTDYEELISGAH-KTLIMKGVV 1016 (1067)
Q Consensus 994 ---s~N~D~~eML~~~~-~gVaMgNA~ 1016 (1067)
++| | ++||+.++ .+++|+|+.
T Consensus 208 ~~~g~N-D-i~Ml~~~g~~~~~v~~~~ 232 (243)
T d2amya1 208 TMPGGN-D-HEIFTDPRTMGYSVTAPE 232 (243)
T ss_dssp CC---C-C-CHHHHCTTEEEEECSSHH
T ss_pred CCCCCC-C-HHHHHCCCCCEEEECCHH
T ss_conf 999997-6-999971597299907999
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.54 E-value=1.6e-12 Score=97.64 Aligned_cols=92 Identities=15% Similarity=0.108 Sum_probs=68.0
Q ss_pred CCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCC--------CHHHHCCCCCEE
Q ss_conf 999689399999899999999713189399944998988789999998499799928877--------011001488669
Q 001492 547 LYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG--------PVDIHRALNNGL 618 (1067)
Q Consensus 547 l~~~V~~~g~~~~~dv~~ly~~A~~~~dV~i~ps~~EgfgltllEAmA~G~PVIat~~Gg--------~~eii~~~~~Gl 618 (1067)
..++|.+.++++ ...++..+ |+||.. +-..|+.|||++|+|+|+....+ ..+.+.....|+
T Consensus 268 ~~~~v~i~~~~p---~~~ll~~a----~~~v~h----gG~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~ 336 (391)
T d1pn3a_ 268 DGADCFVVGEVN---LQELFGRV----AAAIHH----DSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGV 336 (391)
T ss_dssp CCTTCCEESSCC---HHHHHTTS----SCEEEE----SCHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEE
T ss_pred CCCCEEEECCCC---HHHHHHHC----CEEEEC----CCHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCEE
T ss_conf 889889954468---79998425----489852----7437999999828868993355677452999999999879889
Q ss_pred EECCCC--HHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 949999--999999999963199999999999989997
Q 001492 619 LVDPHD--QQAIADALLKLVSEKNLWVECRKNGWKNIH 654 (1067)
Q Consensus 619 lv~p~d--~~~la~aL~~ll~d~~~~~~~~~~a~~~v~ 654 (1067)
.++..+ +++++++|.+++++ +. ++++++..+
T Consensus 337 ~l~~~~~~~~~l~~~i~~~l~~-~~----r~~a~~~a~ 369 (391)
T d1pn3a_ 337 AVDGPVPTIDSLSAALDTALAP-EI----RARATTVAD 369 (391)
T ss_dssp EECCSSCCHHHHHHHHHHHTST-TH----HHHHHHHGG
T ss_pred ECCCCCCCHHHHHHHHHHHHCH-HH----HHHHHHHHH
T ss_conf 7685789999999999998399-99----999999999
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.51 E-value=1.2e-11 Score=91.86 Aligned_cols=111 Identities=14% Similarity=0.069 Sum_probs=77.1
Q ss_pred CCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCC----CHHHHCCCCCEEEEC
Q ss_conf 9999689399999899999999713189399944998988789999998499799928877----011001488669949
Q 001492 546 DLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRALNNGLLVD 621 (1067)
Q Consensus 546 ~l~~~V~~~g~~~~~dv~~ly~~A~~~~dV~i~ps~~EgfgltllEAmA~G~PVIat~~Gg----~~eii~~~~~Gllv~ 621 (1067)
.+.++|.+.+++| ..+++..+ ++||. .|...++.||+++|+|+|+....+ ..+.++....|+.++
T Consensus 283 ~~~~~v~~~~~~p---~~~ll~~~----~~~I~----hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~ 351 (401)
T d1rrva_ 283 DDRDDCFAIDEVN---FQALFRRV----AAVIH----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHD 351 (401)
T ss_dssp CCCTTEEEESSCC---HHHHGGGS----SEEEE----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECS
T ss_pred CCCCCEEEEECCC---CHHHHHHC----CEEEE----CCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCEEECC
T ss_conf 5789889973148---17776212----48886----1772489999983999898066120899999999879889757
Q ss_pred CC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 99--99999999999631999999999999899970998999999999999968
Q 001492 622 PH--DQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACR 673 (1067)
Q Consensus 622 p~--d~~~la~aL~~ll~d~~~~~~~~~~a~~~v~~fsw~~~a~~~l~~l~~~~ 673 (1067)
.. +++.++++|.++++ ++ +++++++..+...- .-+.+-.+.+++..
T Consensus 352 ~~~~~~~~L~~ai~~vl~-~~----~r~~a~~~~~~~~~-~g~~~aa~~ie~~~ 399 (401)
T d1rrva_ 352 GPTPTFESLSAALTTVLA-PE----TRARAEAVAGMVLT-DGAAAAADLVLAAV 399 (401)
T ss_dssp SSCCCHHHHHHHHHHHTS-HH----HHHHHHHHTTTCCC-CHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHC-HH----HHHHHHHHHHHHHH-CCHHHHHHHHHHHH
T ss_conf 478999999999999849-79----99999999998755-17999999999985
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.46 E-value=3e-10 Score=82.65 Aligned_cols=329 Identities=13% Similarity=0.052 Sum_probs=173.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC
Q ss_conf 77488999999999980999038999824889998787678763114799998985445668809996367887667553
Q 001492 190 TGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRK 269 (1067)
Q Consensus 190 ~GG~~~~v~~LA~aLa~~G~v~~V~viT~~~~~~~v~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~rip~~~~~~~l~k 269 (1067)
|||.......|+++|.++| |+|.+++.... ...+ .....|..+..++..........
T Consensus 10 tGGHv~~a~al~~~L~~~G--~eV~~i~~~~~---------~~~~------------~~~~~~~~~~~~~~~~~~~~~~~ 66 (351)
T d1f0ka_ 10 TGGHVFPGLAVAHHLMAQG--WQVRWLGTADR---------MEAD------------LVPKHGIEIDFIRISGLRGKGIK 66 (351)
T ss_dssp SHHHHHHHHHHHHHHHTTT--CEEEEEECTTS---------THHH------------HGGGGTCEEEECCCCCCTTCCHH
T ss_pred CHHHHHHHHHHHHHHHHCC--CEEEEEEECCC---------CHHH------------CCCCCCCCEEEEECCCCCCCCHH
T ss_conf 5898999999999998589--98999995883---------2432------------23504995799978886777779
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 46652067789999999999748988662599999854999869823699999981499969999579922257999861
Q 001492 270 ELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQ 349 (1067)
Q Consensus 270 ~~l~~~l~~f~~~~l~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~ 349 (1067)
..++. . ......+......+.+ .+||++.+........+...++.+++|.+...++.......
T Consensus 67 ~~~~~-~----~~~~~~~~~~~~i~~~-------~~~~~~~~~~~~~~~~~~~~a~~~~ip~~~~~~~~~~~~~~----- 129 (351)
T d1f0ka_ 67 ALIAA-P----LRIFNAWRQARAIMKA-------YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTN----- 129 (351)
T ss_dssp HHHTC-H----HHHHHHHHHHHHHHHH-------HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSSCCHHH-----
T ss_pred HHHHH-H----HHHHHHHHHHHHHHHC-------CCCCEEEECCCCHHHHHHHHHHHCCCCEEECCCCCCCCHHH-----
T ss_conf 99999-9----8877767777887631-------34430011032211344545540564346322212310467-----
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECC
Q ss_conf 88974556557678786787540123577999289889999971017970578999999771374457888997899399
Q 001492 350 GRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPP 429 (1067)
Q Consensus 350 g~~~~~~i~~~y~i~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~vIPn 429 (1067)
+.....++.+....... . .....+.+
T Consensus 130 ---------------------~~~~~~~~~~~~~~~~~--------~-------------------------~~~~~~~~ 155 (351)
T d1f0ka_ 130 ---------------------KWLAKIATKVMQAFPGA--------F-------------------------PNAEVVGN 155 (351)
T ss_dssp ---------------------HHHTTTCSEEEESSTTS--------S-------------------------SSCEECCC
T ss_pred ---------------------HHHHHHCCEEECCCCCC--------C-------------------------CCEEEECC
T ss_conf ---------------------77654134011023566--------5-------------------------30038767
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCH-HHHHHHHHHCCCC
Q ss_conf 988999657899975422111124788899999861235766531169998589997089999999-9999999750134
Q 001492 430 GMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNI-TTLLKAFGECRPL 508 (1067)
Q Consensus 430 GiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRl~~~Kgi-~~ll~A~~~l~~l 508 (1067)
......+.... ...+.........++.++--.....+ ..+.+.+..+.
T Consensus 156 ~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~i~~~~gs~g~~~~~~~~~~~~~~l~-- 204 (351)
T d1f0ka_ 156 PVRTDVLALPL-----------------------------PQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLG-- 204 (351)
T ss_dssp CCCHHHHTSCC-----------------------------HHHHHTTCCSSEEEEEECTTTCCHHHHHHHHHHHHHHG--
T ss_pred CCCCCCCCCHH-----------------------------HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC--
T ss_conf 76431000005-----------------------------77653203587431334454013466888887666524--
Q ss_pred CCCCCEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHH
Q ss_conf 69995999993289924541065589999999997629999689399999899999999713189399944998988789
Q 001492 509 RELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLT 588 (1067)
Q Consensus 509 ~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dv~~ly~~A~~~~dV~i~ps~~Egfglt 588 (1067)
. ....++++..... ......... ....++...++ .+++.+++..| |++|.- +-+.|
T Consensus 205 -~-~~~~i~~~~~~~~----------~~~~~~~~~--~~~~~~~v~~f--~~~~~~lm~~a----dl~It~----~G~~T 260 (351)
T d1f0ka_ 205 -D-SVTIWHQSGKGSQ----------QSVEQAYAE--AGQPQHKVTEF--IDDMAAAYAWA----DVVVCR----SGALT 260 (351)
T ss_dssp -G-GEEEEEECCTTCH----------HHHHHHHHH--TTCTTSEEESC--CSCHHHHHHHC----SEEEEC----CCHHH
T ss_pred -C-CCEEEEECCCCCH----------HHHHHHHCC--CCCCCCEEEEE--HHHHHHHHHHC----CHHHCC----CCCHH
T ss_conf -5-5304542134104----------443343202--33223155543--05589999747----422205----54237
Q ss_pred HHHHHHCCCCEEECCCC---C----CHHHHCCCCCEEEECCC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHH
Q ss_conf 99999849979992887---7----01100148866994999--999999999996319999999999998999709989
Q 001492 589 LIEAAAHGLPMVATKNG---G----PVDIHRALNNGLLVDPH--DQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWP 659 (1067)
Q Consensus 589 llEAmA~G~PVIat~~G---g----~~eii~~~~~Gllv~p~--d~~~la~aL~~ll~d~~~~~~~~~~a~~~v~~fsw~ 659 (1067)
+.|++++|+|+|..... + .++.+.+.+.|+.++.. +.+.+.++|..+ +++...+|++++++......++
T Consensus 261 ~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~~~~~~~~e~l~~~l~~l--~~~~~~~~~~~~~~~~~~~~a~ 338 (351)
T d1f0ka_ 261 VSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW--SRETLLTMAERARAASIPDATE 338 (351)
T ss_dssp HHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC--CHHHHHHHHHHHHHTCCTTHHH
T ss_pred HHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECHHHCCHHHHHHHHHHH--CHHHHHHHHHHHHCCCCCCHHH
T ss_conf 78888717854654154677669999999998899899223319999999999863--9999999999987269956999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q 001492 660 EHCRTYLTRV 669 (1067)
Q Consensus 660 ~~a~~~l~~l 669 (1067)
..++..+++.
T Consensus 339 ~i~~~i~~l~ 348 (351)
T d1f0ka_ 339 RVANEVSRVA 348 (351)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
T ss_conf 9999999998
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.38 E-value=1.5e-13 Score=104.62 Aligned_cols=78 Identities=10% Similarity=0.170 Sum_probs=62.9
Q ss_pred EEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCEEEEECCCCCCCHHHH-HCCCCCCCCCCCCCCC
Q ss_conf 980189998999999999919974537998367899885654128860899279720253554-1025767887778999
Q 001492 961 QIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEEL-LRTTNLRDDIVPSESP 1039 (1067)
Q Consensus 961 dV~P~~asKg~Alr~L~~~~gid~~~via~~GDs~N~D~~eML~~~~~gVaMgNA~~~~~~~~-~~a~~~~~d~~~~~~~ 1039 (1067)
...+....|+.+.+.++.+++++++++++ |||+.| | ++||+.+|.|||| |+. ++++ .+++
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~i~~~evia-iGDg~N-D-i~Ml~~Ag~gIAm-na~---~~v~~~~~~------------ 182 (206)
T d1rkua_ 122 RVVGYQLRQKDPKRQSVIAFKSLYYRVIA-AGDSYN-D-TTMLSEAHAGILF-HAP---ENVIREFPQ------------ 182 (206)
T ss_dssp CEEEEECCSSSHHHHHHHHHHHTTCEEEE-EECSST-T-HHHHHHSSEEEEE-SCC---HHHHHHCTT------------
T ss_pred CCCCCCCCCHHHHHHHHHHHCCCCCCEEE-ECCCCC-C-HHHHHHCCCCEEE-CCC---HHHHHHCCC------------
T ss_conf 45432112014578899986425652188-438732-7-9999858940997-897---799986789------------
Q ss_pred CCEEECCCCCHHHHHHHHHHHC
Q ss_conf 8355057666899999999625
Q 001492 1040 LIAHVNANAKVDEIANALRQVG 1061 (1067)
Q Consensus 1040 ~~~~vt~~~~~dgI~~al~~~g 1061 (1067)
|+| ..+.+++.++|.+..
T Consensus 183 ---~~~-~~~~~d~~~~~~~~~ 200 (206)
T d1rkua_ 183 ---FPA-VHTYEDLKREFLKAS 200 (206)
T ss_dssp ---SCE-ECSHHHHHHHHHHHC
T ss_pred ---CEE-ECCHHHHHHHHHHHH
T ss_conf ---556-268899999999976
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.37 E-value=3.5e-10 Score=82.14 Aligned_cols=152 Identities=14% Similarity=0.054 Sum_probs=92.3
Q ss_pred CCCCEEEEEECCC-CCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCEEECCC
Q ss_conf 9985899970899-999999999999750134699959999932899245410655899999999976299996893999
Q 001492 478 PHKPMILALSRPD-PKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKH 556 (1067)
Q Consensus 478 ~~~~~Il~vgRl~-~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 556 (1067)
....++++.+... ..+....+++++..+. ....++.+.... ....+.++|.+.++
T Consensus 237 ~~~~i~~~~~~~~~~~~~~~~~~~al~~~~-----~~~~~~~~~~~~-------------------~~~~~~~nv~~~~~ 292 (401)
T d1iira_ 237 GPPPVYLGFGSLGAPADAVRVAIDAIRAHG-----RRVILSRGWADL-------------------VLPDDGADCFAIGE 292 (401)
T ss_dssp SSCCEEEECC---CCHHHHHHHHHHHHHTT-----CCEEECTTCTTC-------------------CCSSCGGGEEECSS
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHCC-----CEEEEECCCCCC-------------------CCCCCCCCEEEEEC
T ss_conf 897599715754665689999999999769-----807984267764-------------------23357897899702
Q ss_pred CCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCC----CHHHHCCCCCEEEECCC--CHHHHHH
Q ss_conf 99899999999713189399944998988789999998499799928877----01100148866994999--9999999
Q 001492 557 HKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRALNNGLLVDPH--DQQAIAD 630 (1067)
Q Consensus 557 ~~~~dv~~ly~~A~~~~dV~i~ps~~EgfgltllEAmA~G~PVIat~~Gg----~~eii~~~~~Gllv~p~--d~~~la~ 630 (1067)
.+ ..++|..+ ++||. .+...++.||+++|+|+|.....+ ....++....|+.++.. +++++++
T Consensus 293 ~p---~~~~l~~~----~~~V~----hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~~~~~~l~~ 361 (401)
T d1iira_ 293 VN---HQVLFGRV----AAVIH----HGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSA 361 (401)
T ss_dssp CC---HHHHGGGS----SEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHH
T ss_pred CC---HHHHHHHC----CEEEE----CCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHH
T ss_conf 58---79999545----89996----377169999998199999806614179999999987988876847899999999
Q ss_pred HHHHHHCCHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHH
Q ss_conf 99996319999999999998999709---9899999999999
Q 001492 631 ALLKLVSEKNLWVECRKNGWKNIHLF---SWPEHCRTYLTRV 669 (1067)
Q Consensus 631 aL~~ll~d~~~~~~~~~~a~~~v~~f---sw~~~a~~~l~~l 669 (1067)
+|.+++++ + +++++++..+.+ .-...++.+++.+
T Consensus 362 ai~~~l~~-~----~~~~a~~~~~~~~~~~~~~aa~~i~~~i 398 (401)
T d1iira_ 362 ALATALTP-E----THARATAVAGTIRTDGAAVAARLLLDAV 398 (401)
T ss_dssp HHHHHTSH-H----HHHHHHHHHHHSCSCHHHHHHHHHHHHH
T ss_pred HHHHHHCH-H----HHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 99999697-9----9999999999987508399999999998
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.19 E-value=1.9e-11 Score=90.61 Aligned_cols=78 Identities=10% Similarity=0.071 Sum_probs=68.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCC
Q ss_conf 38980189998999999999919974537998367899885654128860899279720253554102576788777899
Q 001492 959 RMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSES 1038 (1067)
Q Consensus 959 ~ldV~P~~asKg~Alr~L~~~~gid~~~via~~GDs~N~D~~eML~~~~~gVaMgNA~~~~~~~~~~a~~~~~d~~~~~~ 1038 (1067)
..+..+.+.+|..++..++.+++++++++++ |||+.| | ++||+.+|.+||| ||. ++++.+|+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-iGDs~n-D-i~m~~~ag~~va~-na~---~~lk~~Ad----------- 194 (210)
T d1j97a_ 133 VEGEVLKENAKGEILEKIAKIEGINLEDTVA-VGDGAN-D-ISMFKKAGLKIAF-CAK---PILKEKAD----------- 194 (210)
T ss_dssp EECSSCSTTHHHHHHHHHHHHHTCCGGGEEE-EESSGG-G-HHHHHHCSEEEEE-SCC---HHHHTTCS-----------
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEE-ECCCCC-H-HHHHHHCCCCEEE-CCC---HHHHHHCC-----------
T ss_conf 3321111234541033578884666554178-637847-4-9999988987899-989---99997499-----------
Q ss_pred CCCEEECCCCCHHHHHHHHH
Q ss_conf 98355057666899999999
Q 001492 1039 PLIAHVNANAKVDEIANALR 1058 (1067)
Q Consensus 1039 ~~~~~vt~~~~~dgI~~al~ 1058 (1067)
++++..+.+||.++||
T Consensus 195 ----~vi~~~d~~~vl~~lk 210 (210)
T d1j97a_ 195 ----ICIEKRDLREILKYIK 210 (210)
T ss_dssp ----EEECSSCGGGGGGGCC
T ss_pred ----EEECCCCHHHHHHHHC
T ss_conf ----9991799999999869
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=99.08 E-value=2.7e-07 Score=62.94 Aligned_cols=85 Identities=15% Similarity=0.130 Sum_probs=58.6
Q ss_pred CCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCC----HH-HHCCCCCEEEECCC
Q ss_conf 96893999998999999997131893999449989887899999984997999288770----11-00148866994999
Q 001492 549 GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----VD-IHRALNNGLLVDPH 623 (1067)
Q Consensus 549 ~~V~~~g~~~~~dv~~ly~~A~~~~dV~i~ps~~EgfgltllEAmA~G~PVIat~~Gg~----~e-ii~~~~~Gllv~p~ 623 (1067)
+++.+..+.++.++. .+..+ ++||.- |-..++.||+.+|+|+|+....+= .. +++....|+.++..
T Consensus 330 ~n~~v~~~~pq~~~l-~~p~~----~~fItH----GG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~ 400 (461)
T d2acva1 330 GKGMICGWAPQVEVL-AHKAI----GGFVSH----CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVD 400 (461)
T ss_dssp CSEEEESSCCHHHHH-HSTTE----EEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSS
T ss_pred CCEEEEECCCHHHHH-HCCCC----CEEEEC----CCCCHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCEEEEECC
T ss_conf 873898518778888-55657----779833----884489999985999896776000288999999984936784153
Q ss_pred --------CHHHHHHHHHHHHCC-HHHH
Q ss_conf --------999999999996319-9999
Q 001492 624 --------DQQAIADALLKLVSE-KNLW 642 (1067)
Q Consensus 624 --------d~~~la~aL~~ll~d-~~~~ 642 (1067)
+.++++++|.++|++ +..+
T Consensus 401 ~~~~~~~~t~~~l~~a~~~vl~~d~~~r 428 (461)
T d2acva1 401 YRKGSDVVAAEEIEKGLKDLMDKDSIVH 428 (461)
T ss_dssp CCTTCCCCCHHHHHHHHHHHTCTTCTHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCHHHH
T ss_conf 1136785479999999999960889999
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=99.04 E-value=7.8e-07 Score=59.88 Aligned_cols=147 Identities=15% Similarity=0.125 Sum_probs=98.1
Q ss_pred CCCCCCCEEEEEECCCCCCCHHHHHHHHHH-CCCCCCC-----CCEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHCCC-
Q ss_conf 169998589997089999999999999975-0134699-----959999932899245410655899999999976299-
Q 001492 475 LTNPHKPMILALSRPDPKKNITTLLKAFGE-CRPLREL-----ANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDL- 547 (1067)
Q Consensus 475 ~~~~~~~~Il~vgRl~~~Kgi~~ll~A~~~-l~~l~~~-----~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l- 547 (1067)
..+|+...++++-|+...|...+++.-... ...+... ..+++|.++....... ...+.+..|....+..+-
T Consensus 521 ~ldp~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d~--~gK~iIk~I~~va~~in~d 598 (796)
T d1l5wa_ 521 EINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYY--LAKNIIFAINKVADVINND 598 (796)
T ss_dssp CCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCH--HHHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHH--HHHHHHHHHHHHHHHHCCC
T ss_conf 35856514034345444314530353599999998508645778659997488898317--8999999999999986178
Q ss_pred -----CCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCC--CCCCCHHHHHHHHCCCCEEECCCCCCHHHHCC--CCCEE
Q ss_conf -----9968939999989999999971318939994499--89887899999984997999288770110014--88669
Q 001492 548 -----YGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPAL--VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRA--LNNGL 618 (1067)
Q Consensus 548 -----~~~V~~~g~~~~~dv~~ly~~A~~~~dV~i~ps~--~EgfgltllEAmA~G~PVIat~~Gg~~eii~~--~~~Gl 618 (1067)
..+|.|+.-..-+--..+..+| ||-++.|. .|..|.+-+-|+..|.+.+++..|...|+.++ ++||+
T Consensus 599 p~~~~~~kVVFlenYdv~lA~~lv~g~----DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE~~~~vg~eN~f 674 (796)
T d1l5wa_ 599 PLVGDKLKVVFLPDYCVSAAEKLIPAA----DISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIF 674 (796)
T ss_dssp TTTGGGEEEEECSSCCHHHHHHHGGGC----SEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSE
T ss_pred HHHCCCEEEEEECCCCHHHHHHHHCCC----CHHHHCCCCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCEE
T ss_conf 554363338980787568999874401----2654099987345782677999859716604664479888863745368
Q ss_pred EECCCCHHHH
Q ss_conf 9499999999
Q 001492 619 LVDPHDQQAI 628 (1067)
Q Consensus 619 lv~p~d~~~l 628 (1067)
++-. +.+++
T Consensus 675 ~fG~-~~~ev 683 (796)
T d1l5wa_ 675 IFGH-TVEQV 683 (796)
T ss_dssp ECSC-CHHHH
T ss_pred EECC-CHHHH
T ss_conf 8068-66777
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=99.02 E-value=4.9e-07 Score=61.22 Aligned_cols=94 Identities=11% Similarity=0.091 Sum_probs=68.3
Q ss_pred CCCEEECCCCCCCCHHHHH--HHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCC----HHHH-CCCCCEEEE
Q ss_conf 9968939999989999999--97131893999449989887899999984997999288770----1100-148866994
Q 001492 548 YGQVAYPKHHKQYDVPEIY--RLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----VDIH-RALNNGLLV 620 (1067)
Q Consensus 548 ~~~V~~~g~~~~~dv~~ly--~~A~~~~dV~i~ps~~EgfgltllEAmA~G~PVIat~~Gg~----~eii-~~~~~Gllv 620 (1067)
..+|.+..++|+. +++ ..+ ++||.- |-..++.||+.+|+|+|+....+= ...+ +....|+.+
T Consensus 345 ~~Nv~~~~~~Pq~---~lL~hp~~----~~fItH----GG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l 413 (473)
T d2pq6a1 345 ADRGLIASWCPQD---KVLNHPSI----GGFLTH----CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEI 413 (473)
T ss_dssp TTTEEEESCCCHH---HHHTSTTE----EEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC
T ss_pred CCCEEEEEECCHH---HHHCCCCC----CEEEEC----CCCCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCEEEEE
T ss_conf 4766886308879---99647767----599956----884089999985999896564112188999999971737861
Q ss_pred CCC-CHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 999-999999999996319999999999998999
Q 001492 621 DPH-DQQAIADALLKLVSEKNLWVECRKNGWKNI 653 (1067)
Q Consensus 621 ~p~-d~~~la~aL~~ll~d~~~~~~~~~~a~~~v 653 (1067)
+.. +.++|+++|.++++|+.- .++++++.+..
T Consensus 414 ~~~~t~~~l~~ai~~vl~d~~~-~~~r~~a~~l~ 446 (473)
T d2pq6a1 414 DTNVKREELAKLINEVIAGDKG-KKMKQKAMELK 446 (473)
T ss_dssp CSSCCHHHHHHHHHHHHTSHHH-HHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHCCCHH-HHHHHHHHHHH
T ss_conf 8973899999999999769768-99999999999
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.86 E-value=1.8e-06 Score=57.41 Aligned_cols=282 Identities=13% Similarity=0.004 Sum_probs=165.3
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEECCC-CHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 9997489886625999998549998698-236999999814999699995799222579998618897455655767878
Q 001492 287 CLNMSKVLGEQIGGGQPVWPYVIHGHYA-DAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMR 365 (1067)
Q Consensus 287 ~~~~~~~l~~~~~~~~~~~pDvIh~h~~-~~~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~i~~ 365 (1067)
+..+.+.+.+ .+||+|..+.- ....++++.+...++|+++.--+.-. |.+...-... +.|
T Consensus 77 ~~~~~~~l~~-------~kPD~vlv~GDr~e~la~a~aa~~~~ipi~HiegG~rs---------g~~~~~~~de---~~R 137 (373)
T d1v4va_ 77 LPQAARALKE-------MGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRS---------GNLKEPFPEE---ANR 137 (373)
T ss_dssp HHHHHHHHHH-------TTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCC---------SCTTSSTTHH---HHH
T ss_pred HHHHHHHHHH-------CCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCC---------CCCCCCCCHH---HHH
T ss_conf 9987666640-------37640011136753103778898762122241343455---------4335676166---666
Q ss_pred HHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC-CCCCCCCCCCCCCC
Q ss_conf 67875401235779992898899999710179705789999997713744578889978993999-88999657899975
Q 001492 366 RIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPG-MDFSNVVAQEDTPE 444 (1067)
Q Consensus 366 ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~vIPnG-iD~~~f~~~~~~~~ 444 (1067)
.+ +-..|+..+|+++...+.+.... ..+ .++.++-+. +|.-... .
T Consensus 138 ~~-----iskls~~hf~~t~~~~~~L~~~G--e~~---------------------~~I~~vG~p~~D~i~~~--~---- 183 (373)
T d1v4va_ 138 RL-----TDVLTDLDFAPTPLAKANLLKEG--KRE---------------------EGILVTGQTGVDAVLLA--A---- 183 (373)
T ss_dssp HH-----HHHHCSEEEESSHHHHHHHHTTT--CCG---------------------GGEEECCCHHHHHHHHH--H----
T ss_pred HH-----HCCCCCEEEECCHHHHHHHHHHC--CCC---------------------CCEEECCCCHHHHHHHH--H----
T ss_conf 55-----22344325512215666666630--454---------------------21344266215577765--4----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCH
Q ss_conf 42211112478889999986123576653116999858999708999999999999997501346999599999328992
Q 001492 445 VDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDI 524 (1067)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRl~~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~ 524 (1067)
.+. ............++.+-|....++...+.+++..+.... .++.++....+..
T Consensus 184 ---~~~--------------------~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~--~~~~~i~p~~~~~ 238 (373)
T d1v4va_ 184 ---KLG--------------------RLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVAEAF--PHLTFVYPVHLNP 238 (373)
T ss_dssp ---HHC--------------------CCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHC--TTSEEEEECCSCH
T ss_pred ---HHC--------------------CCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHC--CCCEEEEEECCCC
T ss_conf ---311--------------------000223445531688426555312789999999986533--5650356403422
Q ss_pred HHHHCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECC-
Q ss_conf 4541065589999999997629999689399999899999999713189399944998988789999998499799928-
Q 001492 525 EEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATK- 603 (1067)
Q Consensus 525 ~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dv~~ly~~A~~~~dV~i~ps~~EgfgltllEAmA~G~PVIat~- 603 (1067)
..... ..+......++.+...++..+...+++.| .+++ + ..|-...||...|+|+|.-.
T Consensus 239 --------~~~~~---~~~~~~~~~n~~~~~~l~~~~~l~ll~~s----~~vi-g----nSssgi~Ea~~lg~P~Inir~ 298 (373)
T d1v4va_ 239 --------VVREA---VFPVLKGVRNFVLLDPLEYGSMAALMRAS----LLLV-T----DSGGLQEEGAALGVPVVVLRN 298 (373)
T ss_dssp --------HHHHH---HHHHHTTCTTEEEECCCCHHHHHHHHHTE----EEEE-E----SCHHHHHHHHHTTCCEEECSS
T ss_pred --------CCHHH---HHHHHCCCCCCEEECCCHHHHHHHHHHHC----EEEE-C----CCCHHHHCCHHHCCCEEEECC
T ss_conf --------21035---55543033320011100078888876430----1685-0----641222200320586898488
Q ss_pred CCCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHH
Q ss_conf 877011001488669949999999999999963199999999999989997-0998999999999999968
Q 001492 604 NGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIH-LFSWPEHCRTYLTRVAACR 673 (1067)
Q Consensus 604 ~Gg~~eii~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~a~~~v~-~fsw~~~a~~~l~~l~~~~ 673 (1067)
.|.-++-++.+. -++++ .|.+++..++.+++.++..+.++.. .. -|---..+++..+.+..-+
T Consensus 299 ~~eRqeg~~~g~-nvlv~-~d~~~I~~~i~~~l~~~~~~~~~~~-----~~npYGdG~as~rI~~~L~~~~ 362 (373)
T d1v4va_ 299 VTERPEGLKAGI-LKLAG-TDPEGVYRVVKGLLENPEELSRMRK-----AKNPYGDGKAGLMVARGVAWRL 362 (373)
T ss_dssp SCSCHHHHHHTS-EEECC-SCHHHHHHHHHHHHTCHHHHHHHHH-----SCCSSCCSCHHHHHHHHHHHHT
T ss_pred CCCCHHHHHCCE-EEECC-CCHHHHHHHHHHHHCCHHHHHHCCC-----CCCCCCCCHHHHHHHHHHHHHH
T ss_conf 766987896290-49758-9999999999999719898864024-----8898989879999999999984
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.86 E-value=3.3e-09 Score=75.69 Aligned_cols=79 Identities=8% Similarity=-0.029 Sum_probs=70.8
Q ss_pred EEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 98018999899999999991997453799836789988565412886089927972025355410257678877789998
Q 001492 961 QIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPL 1040 (1067)
Q Consensus 961 dV~P~~asKg~Alr~L~~~~gid~~~via~~GDs~N~D~~eML~~~~~gVaMgNA~~~~~~~~~~a~~~~~d~~~~~~~~ 1040 (1067)
++.....+|..+++.+++++++++++++. +||+.| | ++||+.++.++||+||. ++++.+|+
T Consensus 73 ~~~~~~~~K~~~l~~~~~~~~i~~~~v~~-vGDd~n-D-l~~l~~~g~siap~nA~---~~vk~~A~------------- 133 (177)
T d1k1ea_ 73 LFFLGKLEKETACFDLMKQAGVTAEQTAY-IGDDSV-D-LPAFAACGTSFAVADAP---IYVKNAVD------------- 133 (177)
T ss_dssp EEEESCSCHHHHHHHHHHHHTCCGGGEEE-EECSGG-G-HHHHHHSSEEEECTTSC---HHHHTTSS-------------
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCEEEE-ECCCCC-H-HHHHHHCCEEEECCCCC---HHHHHHCC-------------
T ss_conf 01101363888999999986677522577-058840-7-89996689289848864---99998589-------------
Q ss_pred CEEECCCCCHHH-HHHHHHHH
Q ss_conf 355057666899-99999962
Q 001492 1041 IAHVNANAKVDE-IANALRQV 1060 (1067)
Q Consensus 1041 ~~~vt~~~~~dg-I~~al~~~ 1060 (1067)
|||+...-+| |+.+++++
T Consensus 134 --~Vt~~~GG~GavrE~~e~i 152 (177)
T d1k1ea_ 134 --HVLSTHGGKGAFREMSDMI 152 (177)
T ss_dssp --EECSSCTTTTHHHHHHHHH
T ss_pred --EEECCCCCCCHHHHHHHHH
T ss_conf --9917889976399999999
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=98.79 E-value=5.3e-08 Score=67.67 Aligned_cols=198 Identities=9% Similarity=-0.030 Sum_probs=99.3
Q ss_pred EEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC---CCCHHHHHHHHHHCCCCCCCCCEEEECCCC
Q ss_conf 38999985799999996356899999999998247898340799987---999888999998449998999779981794
Q 001492 776 RLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALST---AMPVSETIEFLNSMKIEANEFDALICSSGG 852 (1067)
Q Consensus 776 klilia~D~DgTl~~~~~~i~~~~~~al~~l~~~g~~g~i~~vvIaT---GR~~~~l~~~l~~~gi~~~~~d~~I~~nGs 852 (1067)
|.++| |+||||.+.+..+ +.+.++|+++++.| + .|+++| +|+..++.+.+..+|++. ..+-++++...
T Consensus 4 k~Vif--DlDGTL~~~~~~i-~~a~e~i~~l~~~g----~-~~~~~TN~~~~~~~~~~~~l~~~G~~~-~~~~i~~~~~~ 74 (250)
T d2c4na1 4 KNVIC--DIDGVLMHDNVAV-PGAAEFLHGIMDKG----L-PLVLLTNYPSQTGQDLANRFATAGVDV-PDSVFYTSAMA 74 (250)
T ss_dssp CEEEE--ECBTTTEETTEEC-TTHHHHHHHHHHTT----C-CEEEEESCCSCCHHHHHHHHHHTTCCC-CGGGEEEHHHH
T ss_pred CEEEE--ECCCEEEECCCCC-CCHHHHHHHHHHCC----C-CEEEEECCCCCCHHHHHHHHHHCCCCC-CCEEEECHHHH
T ss_conf 79999--7998018799858-20999999999779----9-589992899999999988876303566-54167304999
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCH
Q ss_conf 69805887546886778823241012332650269999964201357888889999831133457934899992299805
Q 001492 853 EMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKA 932 (1067)
Q Consensus 853 ~I~~~~~~~~~~~~~~~d~~~~~~I~~~w~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~~~~~~~ 932 (1067)
...+.... .... .+....+.+...+........+.. ..+.+.-...... .
T Consensus 75 ~~~~l~~~-------~~~~------~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~v~~~~~~~~-~ 124 (250)
T d2c4na1 75 TADFLRRQ-------EGKK------AYVVGEGALIHELYKAGFTITDVN----------------PDFVIVGETRSYN-W 124 (250)
T ss_dssp HHHHHHTS-------SCCE------EEEECCTHHHHHHHHTTCEECSSS----------------CSEEEECCCTTCC-H
T ss_pred HHHHHHHH-------HCCC------CCCCCCHHHHHHHHHHHHHCCCCC----------------CCEEECCCCCCCC-H
T ss_conf 99999863-------0553------103587788999997443100235----------------5201126775542-5
Q ss_pred HHHHHHHHHHHHCCCCEEEEEEECCE----E---------------EEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECC
Q ss_conf 78999999998048928999840890----3---------------8980189998999999999919974537998367
Q 001492 933 RRIDDLRQKLRMRGLRCHPMYCRNST----R---------------MQIVPLLASRSQALRYLFVRWRLNVANMFVILGE 993 (1067)
Q Consensus 933 ~~~~el~~~L~~~~~~~~v~~s~~~~----~---------------ldV~P~~asKg~Alr~L~~~~gid~~~via~~GD 993 (1067)
.........+. .....+..+.+.. . .+....+--....+.++++++|++++++++ +||
T Consensus 125 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~lgi~p~e~v~-IGD 201 (250)
T d2c4na1 125 DMMHKAAYFVA--NGARFIATNPDTHGRGFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVI-VGD 201 (250)
T ss_dssp HHHHHHHHHHH--TTCEEEESCCCSBSSTTCBCHHHHHHHHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEE-EES
T ss_pred HHHHHHHHHHH--CCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHCCCCHHEEE-ECC
T ss_conf 78899999874--265210135432357554347625789987502100001342046676666663278034578-468
Q ss_pred CCCCCHHHHHCCCCE-EEEECCCC
Q ss_conf 899885654128860-89927972
Q 001492 994 SGDTDYEELISGAHK-TLIMKGVV 1016 (1067)
Q Consensus 994 s~N~D~~eML~~~~~-gVaMgNA~ 1016 (1067)
+.+|| +.|-+.+|. +|.+..+.
T Consensus 202 ~~~~D-I~~a~~aG~~tilV~~G~ 224 (250)
T d2c4na1 202 NLRTD-ILAGFQAGLETILVLSGV 224 (250)
T ss_dssp CTTTH-HHHHHHTTCEEEEESSSS
T ss_pred CHHHH-HHHHHHCCCCEEEECCCC
T ss_conf 72779-999998799899989999
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=98.78 E-value=6e-06 Score=53.97 Aligned_cols=272 Identities=13% Similarity=0.097 Sum_probs=153.0
Q ss_pred CCCEEEEECCC-CHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf 98549998698-23699999981499969999579922257999861889745565576787867875401235779992
Q 001492 304 VWPYVIHGHYA-DAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVIT 382 (1067)
Q Consensus 304 ~~pDvIh~h~~-~~~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~i~~ri~~E~~~l~~ad~Vi~ 382 (1067)
.+||+|.++.- ....+++..+..+++|+++.--+.-. +.....-.+. ..|.. +-..|+..+|
T Consensus 87 ~kpD~v~v~GDr~e~la~a~aa~~~~Ipi~HiegG~~s---------~~~~~~~~de---~~R~~-----iskls~~hf~ 149 (377)
T d1o6ca_ 87 IKPDIVLVHGDTTTTFAGSLAAFYHQIAVGHVEAGLRT---------GNKYSPFPEE---LNRQM-----TGAIADLHFA 149 (377)
T ss_dssp HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCCCC---------SCTTTTTTHH---HHHHH-----HHHHCSEEEE
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCC---------CCCCCCCCHH---HHCCC-----CCCCEEEEEE
T ss_conf 36653676403454301566653114227999514565---------4332347145---54003-----5653048863
Q ss_pred CCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 898899999710179705789999997713744578889978993999-8899965789997542211112478889999
Q 001492 383 STKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPG-MDFSNVVAQEDTPEVDGELTSLIGGTDGSSP 461 (1067)
Q Consensus 383 ~S~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~vIPnG-iD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1067)
+++...+.+... |.. ..++.++-+. +|.-....... ....
T Consensus 150 ~t~~~~~~L~~~------------------G~~-----~~~I~~vG~~~~D~i~~~~~~~------~~~~---------- 190 (377)
T d1o6ca_ 150 PTGQAKDNLLKE------------------NKK-----ADSIFVTGNTAIDALNTTVRDG------YSHP---------- 190 (377)
T ss_dssp SSHHHHHHHHHT------------------TCC-----GGGEEECCCHHHHHHHHHCCSS------CCCS----------
T ss_pred CCHHHHHHHHHH------------------CCC-----CCEEEECCCHHHHHHHHHHHHH------HHHH----------
T ss_conf 234666344330------------------344-----5427523420678888777777------7533----------
Q ss_pred CCCCHHHHHHHHHCCCCCCCEEEEEECCCCC-CCHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHCCCHHHHHHHHH
Q ss_conf 9861235766531169998589997089999-999999999975013469995999993289924541065589999999
Q 001492 462 KAIPAIWSDVMRFLTNPHKPMILALSRPDPK-KNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLK 540 (1067)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~Il~vgRl~~~-Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~ 540 (1067)
.......+..+++.+-|.... +.....+.++..+. .......++....+.. .....
T Consensus 191 ----------~~~~~~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~-----------~~~~~ 247 (377)
T d1o6ca_ 191 ----------VLDQVGEDKMILLTAHRRENLGEPMENMFKAIRRIV--GEFEDVQVVYPVHLNP-----------VVREA 247 (377)
T ss_dssp ----------TTTTTTTSEEEEECC----------HHHHHHHHHHH--HHCTTEEEEEC----C-----------HHHHH
T ss_pred ----------HHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHC--CCCCCCCCCCCCCCCC-----------CCCHH
T ss_conf ----------344305784499983231014663378999987521--2335565323455211-----------32112
Q ss_pred HHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCC-CCCHHHHCCCCCEEE
Q ss_conf 9976299996893999998999999997131893999449989887899999984997999288-770110014886699
Q 001492 541 LIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKN-GGPVDIHRALNNGLL 619 (1067)
Q Consensus 541 l~~~~~l~~~V~~~g~~~~~dv~~ly~~A~~~~dV~i~ps~~EgfgltllEAmA~G~PVIat~~-Gg~~eii~~~~~Gll 619 (1067)
....+...+++.+...++..+...+++.| ++++-- .|-...||...|+|+|.-.. +.-++-++.+ +-++
T Consensus 248 ~~~~~~~~~ni~~~~~l~~~~fl~llk~s----~~vIgn-----Sss~i~Ea~~lg~P~Inir~~tERqe~~~~g-~nil 317 (377)
T d1o6ca_ 248 AHKHFGDSDRVHLIEPLEVIDFHNFAAKS----HFILTD-----SGGVQEEAPSLGKPVLVLRDTTERPEGVEAG-TLKL 317 (377)
T ss_dssp HHHC--CCSSEEECCCCCHHHHHHHHHHC----SEEEEC-------CHHHHGGGGTCCEEEECSCCC---CTTTT-SSEE
T ss_pred HHHCCCCCCCEEECCCCCHHHHHHHHHHH----HEEECC-----CCHHHHHHHHHHCEEEEECCCCCCCCHHHCC-EEEE
T ss_conf 21013456514751321368899998642----256416-----4046776666541489807887582200068-0598
Q ss_pred ECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Q ss_conf 49999999999999963199999999999989997-0998999999999999
Q 001492 620 VDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIH-LFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 620 v~p~d~~~la~aL~~ll~d~~~~~~~~~~a~~~v~-~fsw~~~a~~~l~~l~ 670 (1067)
+++ |.+++..++.+++.++..+..+.+ .. -|---..+++..+.+.
T Consensus 318 v~~-~~~~I~~~i~~~l~~~~~~~~~~~-----~~npYGdG~as~rI~~~L~ 363 (377)
T d1o6ca_ 318 AGT-DEENIYQLAKQLLTDPDEYKKMSQ-----ASNPYGDGEASRRIVEELL 363 (377)
T ss_dssp ECS-CHHHHHHHHHHHHHCHHHHHHHHH-----CCCTTCCSCHHHHHHHHHH
T ss_pred CCC-CHHHHHHHHHHHHHCHHHHHHHCC-----CCCCCCCCHHHHHHHHHHH
T ss_conf 789-999999999999749687763065-----8898989829999999999
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=98.74 E-value=7.9e-09 Score=73.15 Aligned_cols=51 Identities=10% Similarity=0.197 Sum_probs=40.3
Q ss_pred CCCCCHHH--HHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCE-EEEECCCC
Q ss_conf 18999899--9999999919974537998367899885654128860-89927972
Q 001492 964 PLLASRSQ--ALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHK-TLIMKGVV 1016 (1067)
Q Consensus 964 P~~asKg~--Alr~L~~~~gid~~~via~~GDs~N~D~~eML~~~~~-gVaMgNA~ 1016 (1067)
+...+|.. ...++++++|++++++++ +||+.+|| +.|...+|. +|.|.++.
T Consensus 175 ~~~~~KP~~~~~~~~~~~~gi~~~~~l~-IGD~~~~D-I~~a~~aG~~si~V~~G~ 228 (253)
T d1yv9a1 175 PVYIGKPKAIIMERAIAHLGVEKEQVIM-VGDNYETD-IQSGIQNGIDSLLVTSGF 228 (253)
T ss_dssp CEECSTTSHHHHHHHHHHHCSCGGGEEE-EESCTTTH-HHHHHHHTCEEEEETTSS
T ss_pred EEEECCCCHHHHHHHHHHHCCCCCCEEE-ECCCHHHH-HHHHHHCCCCEEEECCCC
T ss_conf 3651343126787899984888442378-43782779-999998799899989899
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=98.73 E-value=2.5e-06 Score=56.46 Aligned_cols=91 Identities=18% Similarity=0.185 Sum_probs=64.1
Q ss_pred CCCEEECCCCCCCCHHHHH--HHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCC----HHHH-CCCCCEEEE
Q ss_conf 9968939999989999999--97131893999449989887899999984997999288770----1100-148866994
Q 001492 548 YGQVAYPKHHKQYDVPEIY--RLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----VDIH-RALNNGLLV 620 (1067)
Q Consensus 548 ~~~V~~~g~~~~~dv~~ly--~~A~~~~dV~i~ps~~EgfgltllEAmA~G~PVIat~~Gg~----~eii-~~~~~Gllv 620 (1067)
..++.+..++++. +++ ..+ ++||.- |-..++.||+.+|+|+|+....+= ...+ +....|+.+
T Consensus 318 ~~nv~~~~~~pq~---~lL~hp~~----~~fItH----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l 386 (450)
T d2c1xa1 318 RGYGMVVPWAPQA---EVLAHEAV----GAFVTH----CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRI 386 (450)
T ss_dssp TTTEEEESCCCHH---HHHTSTTE----EEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC
T ss_pred CCCCCCCCCCCHH---HHHCCCCE----EEEECC----CCCCHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCEEEE
T ss_conf 3540155467837---66526741----699706----883079999985999896354000089999999970908980
Q ss_pred CCC--CHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 999--999999999996319999999999998
Q 001492 621 DPH--DQQAIADALLKLVSEKNLWVECRKNGW 650 (1067)
Q Consensus 621 ~p~--d~~~la~aL~~ll~d~~~~~~~~~~a~ 650 (1067)
+.. +.+++.++|.++|+|+.- ++.++++.
T Consensus 387 ~~~~~t~~~l~~ai~~vL~d~~y-~~~~~r~~ 417 (450)
T d2c1xa1 387 EGGVFTKSGLMSCFDQILSQEKG-KKLRENLR 417 (450)
T ss_dssp GGGSCCHHHHHHHHHHHHHSHHH-HHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHCCCHH-HHHHHHHH
T ss_conf 38983899999999999619479-99999999
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.66 E-value=1.4e-05 Score=51.45 Aligned_cols=93 Identities=13% Similarity=0.092 Sum_probs=64.5
Q ss_pred CCCCEEECCCCCCCCHHHHHH--HHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCC----HHHH-CCCCCEEE
Q ss_conf 999689399999899999999--7131893999449989887899999984997999288770----1100-14886699
Q 001492 547 LYGQVAYPKHHKQYDVPEIYR--LAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----VDIH-RALNNGLL 619 (1067)
Q Consensus 547 l~~~V~~~g~~~~~dv~~ly~--~A~~~~dV~i~ps~~EgfgltllEAmA~G~PVIat~~Gg~----~eii-~~~~~Gll 619 (1067)
..++|.+.+|+|+. +++. .+ ++||.= |-..+..||+.+|+|+|+....+= ...+ +...-|+.
T Consensus 332 ~~~nv~~~~w~Pq~---~lL~hp~~----~~fVtH----GG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~ 400 (471)
T d2vcha1 332 KKRGFVIPFWAPQA---QVLAHPST----GGFLTH----CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALR 400 (471)
T ss_dssp TTTEEEEESCCCHH---HHHHSTTE----EEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEEC
T ss_pred CCCCEEECCCCCHH---HHHCCCCC----CEEEEC----CCCCHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHEEEEE
T ss_conf 67875521657899---98657657----889706----88428999998599989714401228899999997204899
Q ss_pred ECC-----CCHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 499-----99999999999963199999999999989
Q 001492 620 VDP-----HDQQAIADALLKLVSEKNLWVECRKNGWK 651 (1067)
Q Consensus 620 v~p-----~d~~~la~aL~~ll~d~~~~~~~~~~a~~ 651 (1067)
+.. -+.++++++|.+++++++ -..+++++.+
T Consensus 401 l~~~~~~~~t~~~l~~ai~~vl~~~~-~~~~r~ra~~ 436 (471)
T d2vcha1 401 PRAGDDGLVRREEVARVVKGLMEGEE-GKGVRNKMKE 436 (471)
T ss_dssp CCCCTTSCCCHHHHHHHHHHHHTSTH-HHHHHHHHHH
T ss_pred EECCCCCCCCHHHHHHHHHHHHCCCH-HHHHHHHHHH
T ss_conf 72487886979999999999967947-8999999999
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=98.62 E-value=9.4e-08 Score=65.98 Aligned_cols=226 Identities=14% Similarity=0.117 Sum_probs=112.0
Q ss_pred EEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC---CCCHHHHHHHHHHCCCCCCCCCEEEECCCC
Q ss_conf 38999985799999996356899999999998247898340799987---999888999998449998999779981794
Q 001492 776 RLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALST---AMPVSETIEFLNSMKIEANEFDALICSSGG 852 (1067)
Q Consensus 776 klilia~D~DgTl~~~~~~i~~~~~~al~~l~~~g~~g~i~~vvIaT---GR~~~~l~~~l~~~gi~~~~~d~~I~~nGs 852 (1067)
++++| |+||||.+....+ +.+.+++++++++| + .|+++| +|+...+...+..+|++. .++-++++...
T Consensus 8 k~vlF--DlDGTL~~~~~~i-~~a~e~l~~l~~~g----~-~~~~~TN~~~~~~~~~~~~~~~~g~~~-~~~~v~ts~~~ 78 (261)
T d1vjra_ 8 ELFIL--DMDGTFYLDDSLL-PGSLEFLETLKEKN----K-RFVFFTNNSSLGAQDYVRKLRNMGVDV-PDDAVVTSGEI 78 (261)
T ss_dssp CEEEE--CCBTTTEETTEEC-TTHHHHHHHHHHTT----C-EEEEEESCTTSCHHHHHHHHHHTTCCC-CGGGEEEHHHH
T ss_pred CEEEE--ECCCEEEECCCCC-CHHHHHHHHHHHCC----C-CEEEEECCCCCCHHHHHHHHHHHCCCC-CCCEECCHHHH
T ss_conf 99999--5988568799168-31999999999769----9-889995899999899999998523566-50103458999
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCH
Q ss_conf 69805887546886778823241012332650269999964201357888889999831133457934899992299805
Q 001492 853 EMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKA 932 (1067)
Q Consensus 853 ~I~~~~~~~~~~~~~~~d~~~~~~I~~~w~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~~~~~~~ 932 (1067)
...+- .+......+ +......+...+........+.. ..............
T Consensus 79 ~~~~~-----------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~ 129 (261)
T d1vjra_ 79 TAEHM-----------LKRFGRCRI-FLLGTPQLKKVFEAYGHVIDEEN-----------------PDFVVLGFDKTLTY 129 (261)
T ss_dssp HHHHH-----------HHHHCSCEE-EEESCHHHHHHHHHTTCEECSSS-----------------CSEEEECCCTTCCH
T ss_pred HHHHH-----------HHHCCCCEE-EEECCCCHHHHHHHCCCCCCHHH-----------------CCEEEECCCCCCCH
T ss_conf 99999-----------986379638-98356430578886195025010-----------------12057457765346
Q ss_pred HHHHHHHHHHHHCCCCEEEEEEECCEEE------------------------EEECCCCCHHHHHHHHHHHHCCCCCCEE
Q ss_conf 7899999999804892899984089038------------------------9801899989999999999199745379
Q 001492 933 RRIDDLRQKLRMRGLRCHPMYCRNSTRM------------------------QIVPLLASRSQALRYLFVRWRLNVANMF 988 (1067)
Q Consensus 933 ~~~~el~~~L~~~~~~~~v~~s~~~~~l------------------------dV~P~~asKg~Alr~L~~~~gid~~~vi 988 (1067)
....... .+...+ ..++.......+ +.+..+-........+++++|+++++++
T Consensus 130 ~~~~~~~-~~~~~~--~~~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~l 206 (261)
T d1vjra_ 130 ERLKKAC-ILLRKG--KFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMA 206 (261)
T ss_dssp HHHHHHH-HHHTTT--CEEEESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGGGEE
T ss_pred HHHHHHH-HHHHCC--CCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHCC
T ss_conf 8899998-875037--4012246775455788714145206677765313212136679957888888766404722110
Q ss_pred EEECCCCCCCHHHHHCCCCE-EEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHH
Q ss_conf 98367899885654128860-89927972025355410257678877789998355057666899999999
Q 001492 989 VILGESGDTDYEELISGAHK-TLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALR 1058 (1067)
Q Consensus 989 a~~GDs~N~D~~eML~~~~~-gVaMgNA~~~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~ 1058 (1067)
+ +||+.+|| +.|-..+|. +|.|..+.....+ ...++ ..| +|+.++. ++|.+.|+
T Consensus 207 m-VGD~~~~D-I~ga~~aG~~si~V~~G~~~~~~-~~~~~---------~~P--D~ii~~l--~eL~~~l~ 261 (261)
T d1vjra_ 207 M-VGDRLYTD-VKLGKNAGIVSILVLTGETTPED-LERAE---------TKP--DFVFKNL--GELAKAVQ 261 (261)
T ss_dssp E-EESCHHHH-HHHHHHHTCEEEEESSSSCCHHH-HHHCS---------SCC--SEEESSH--HHHHHHHC
T ss_pred E-ECCCHHHH-HHHHHHCCCCEEEECCCCCCHHH-HHHCC---------CCC--CEEECCH--HHHHHHHC
T ss_conf 3-16871678-99999879969998989998778-86368---------999--8998899--99999769
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.56 E-value=3.3e-06 Score=55.72 Aligned_cols=142 Identities=11% Similarity=0.089 Sum_probs=96.7
Q ss_pred CCCCCCCEEEEEECCCCCCCHHHHH----HHHHHCCCCCC--CCCEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHCCCC
Q ss_conf 1699985899970899999999999----99975013469--99599999328992454106558999999999762999
Q 001492 475 LTNPHKPMILALSRPDPKKNITTLL----KAFGECRPLRE--LANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLY 548 (1067)
Q Consensus 475 ~~~~~~~~Il~vgRl~~~Kgi~~ll----~A~~~l~~l~~--~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~ 548 (1067)
..+|+...++++-|+...|...+.+ .-+.+++.... ...+++|.|+....... .....+..|+...+..+..
T Consensus 545 ~ldp~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~~~P~q~IFaGKAhP~d~--~gK~iIk~I~~va~~in~d 622 (824)
T d2gj4a1 545 HINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYH--MAKMIIKLITAIGDVVNHD 622 (824)
T ss_dssp CCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCH--HHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCH--HHHHHHHHHHHHHHHHHCC
T ss_conf 78964110131000023333456676589999876534567888749998078897638--8999999999999987418
Q ss_pred C------CEEECCCCCCCCHHHHHHHHHCCCCEEEECCC--CCCCCHHHHHHHHCCCCEEECCCCCCHHHHCC--CCCEE
Q ss_conf 9------68939999989999999971318939994499--89887899999984997999288770110014--88669
Q 001492 549 G------QVAYPKHHKQYDVPEIYRLAAKTKGVFINPAL--VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRA--LNNGL 618 (1067)
Q Consensus 549 ~------~V~~~g~~~~~dv~~ly~~A~~~~dV~i~ps~--~EgfgltllEAmA~G~PVIat~~Gg~~eii~~--~~~Gl 618 (1067)
+ +|.|+.-..-+--..++.+| ||.++.|. .|..|..-+-+|..|.+.++|..|...|+.+. +.||+
T Consensus 623 p~~~~~lkVvFlenY~v~lA~~li~g~----Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnvEi~~~vg~~N~~ 698 (824)
T d2gj4a1 623 PVVGDRLRVIFLENYRVSLAEKVIPAA----DLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFF 698 (824)
T ss_dssp TTTGGGEEEEEETTCCHHHHHHHGGGC----SEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSE
T ss_pred HHHCCCEEEEECCCCCHHHHHHHHHHH----HHHHCCCCCCCCCCCCCHHHHHHCCCEEECCCCCHHHHHHHHCCCCCEE
T ss_conf 112153448870787669999751143----4413189997345775045899759835635663589999864756679
Q ss_pred EECC
Q ss_conf 9499
Q 001492 619 LVDP 622 (1067)
Q Consensus 619 lv~p 622 (1067)
++-.
T Consensus 699 ~fG~ 702 (824)
T d2gj4a1 699 IFGM 702 (824)
T ss_dssp ECSC
T ss_pred EECC
T ss_conf 8179
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=98.44 E-value=2.7e-06 Score=56.26 Aligned_cols=198 Identities=13% Similarity=0.110 Sum_probs=99.5
Q ss_pred EEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC---CCCHHHHHHHHHH-CCCCCCCCCEEEECCC
Q ss_conf 38999985799999996356899999999998247898340799987---9998889999984-4999899977998179
Q 001492 776 RLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALST---AMPVSETIEFLNS-MKIEANEFDALICSSG 851 (1067)
Q Consensus 776 klilia~D~DgTl~~~~~~i~~~~~~al~~l~~~g~~g~i~~vvIaT---GR~~~~l~~~l~~-~gi~~~~~d~~I~~nG 851 (1067)
|.++| |+||||.+.+.. .+...++++++++.| + .|+++| .|+...+.+.+.. .+++. ..+.++.+..
T Consensus 3 k~vlF--DlDGTL~~~~~~-i~~a~e~l~~l~~~g----~-~~~~~TN~s~~~~~~~~~~l~~~~~~~~-~~~~i~~~~~ 73 (253)
T d1wvia_ 3 KGYLI--DLDGTIYKGKDR-IPAGEDFVKRLQERQ----L-PYILVTNNTTRTPEMVQEMLATSFNIKT-PLETIYTATL 73 (253)
T ss_dssp CEEEE--ECBTTTEETTEE-CHHHHHHHHHHHHHT----C-CEEEEECCCSSCHHHHHHHHHHHHSCCC-CGGGEEEHHH
T ss_pred CEEEE--CCCCCEEECCCC-CCCHHHHHHHHHHCC----C-CEEEEECCCCCCHHHHHHHHHHHCCCCC-CCCCCCCHHH
T ss_conf 99999--286820889983-814999999999779----9-7899948998999999999986067654-4333466799
Q ss_pred CEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
Q ss_conf 46980588754688677882324101233265026999996420135788888999983113345793489999229980
Q 001492 852 GEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSK 931 (1067)
Q Consensus 852 s~I~~~~~~~~~~~~~~~d~~~~~~I~~~w~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~~~~~~ 931 (1067)
....+- .........+......+...+.......... ..............
T Consensus 74 ~~~~~l------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~ 124 (253)
T d1wvia_ 74 ATIDYM------------NDMKRGKTAYVIGETGLKKAVAEAGYREDSE-----------------NPAYVVVGLDTNLT 124 (253)
T ss_dssp HHHHHH------------HHHCCCSEEEEESCHHHHHHHHHTTCEECSS-----------------SCSEEEECCCTTCB
T ss_pred HHHHHH------------HHHCCCCEEEECCCHHHHHHHHHCCCCCCCC-----------------CCCEEEEECCCCCC
T ss_conf 999999------------8704585134326667899999729753334-----------------43048985478767
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEEECCEE---------------------EEEECCCCCH--HHHHHHHHHHHCCCCCCEE
Q ss_conf 5789999999980489289998408903---------------------8980189998--9999999999199745379
Q 001492 932 ARRIDDLRQKLRMRGLRCHPMYCRNSTR---------------------MQIVPLLASR--SQALRYLFVRWRLNVANMF 988 (1067)
Q Consensus 932 ~~~~~el~~~L~~~~~~~~v~~s~~~~~---------------------ldV~P~~asK--g~Alr~L~~~~gid~~~vi 988 (1067)
..+.+...+..... ..++.++.... ....+...+| ...+.+.++++|+++++++
T Consensus 125 --~~~~~~~~~~~~~~-~~~i~tn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gKP~p~~~~~al~~l~i~~~~~~ 201 (253)
T d1wvia_ 125 --YEKLTLATLAIQKG-AVFIGTNPDLNIPTERGLLPGAGAILFLLEKATRVKPIIIGKPEAVIMNKALDRLGVKRHEAI 201 (253)
T ss_dssp --HHHHHHHHHHHHTT-CEEEESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHHHTSCGGGEE
T ss_pred --HHHHHHHHHHHHHC-CCCCCCCCCCEEECCCCCCCCCCCCHHCCCCCCCCEEEEECCCCCCCCEEHHHHCCCCCCCEE
T ss_conf --88887776666522-551167999634768863046773210123333330478416774200110011034545169
Q ss_pred EEECCCCCCCHHHHHCCCCE-EEEECCCC
Q ss_conf 98367899885654128860-89927972
Q 001492 989 VILGESGDTDYEELISGAHK-TLIMKGVV 1016 (1067)
Q Consensus 989 a~~GDs~N~D~~eML~~~~~-gVaMgNA~ 1016 (1067)
+ +||+.+|| +.|-..+|. +|.|..+.
T Consensus 202 m-IGDs~~~D-I~gA~~aG~~si~V~~G~ 228 (253)
T d1wvia_ 202 M-VGDNYLTD-ITAGIKNDIATLLVTTGF 228 (253)
T ss_dssp E-EESCTTTT-HHHHHHTTCEEEEESSSS
T ss_pred E-ECCCHHHH-HHHHHHCCCCEEEECCCC
T ss_conf 9-82780777-999998799799989899
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.17 E-value=0.00021 Score=43.70 Aligned_cols=278 Identities=15% Similarity=0.108 Sum_probs=154.2
Q ss_pred CCCEEEEECCC-CHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf 98549998698-23699999981499969999579922257999861889745565576787867875401235779992
Q 001492 304 VWPYVIHGHYA-DAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVIT 382 (1067)
Q Consensus 304 ~~pDvIh~h~~-~~~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~i~~ri~~E~~~l~~ad~Vi~ 382 (1067)
.+||+|.++.- ....+++..+..+++|+++.--+.-. +.....-.+.. .|.. .-..|+..+|
T Consensus 85 ~kPD~v~v~GDr~e~la~a~aa~~~~ipi~HiegG~~s---------~~~~~~~pde~---~R~~-----iskls~~hf~ 147 (376)
T d1f6da_ 85 FKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRT---------GDLYSPWPEEA---NRTL-----TGHLAMYHFS 147 (376)
T ss_dssp HCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCC---------SCTTSSTTHHH---HHHH-----HHHTCSEEEE
T ss_pred CCCCCEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCC---------CCCCCCCCHHH---HHHH-----HCCCEEEEEE
T ss_conf 56762243103443136899987407538998524465---------42000474066---5542-----0320048874
Q ss_pred CCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECC-CCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89889999971017970578999999771374457888997899399-98899965-78999754221111247888999
Q 001492 383 STKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPP-GMDFSNVV-AQEDTPEVDGELTSLIGGTDGSS 460 (1067)
Q Consensus 383 ~S~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~vIPn-GiD~~~f~-~~~~~~~~~~~~~~~~~~~~~~~ 460 (1067)
+++...+.+... |.. ..++.++-+ ++|.-... +...
T Consensus 148 ~~~~~~~~L~~~------------------G~~-----~~~I~~vG~~~~D~l~~~~~~~~------------------- 185 (376)
T d1f6da_ 148 PTETSRQNLLRE------------------NVA-----DSRIFITGNTVIDALLWVRDQVM------------------- 185 (376)
T ss_dssp SSHHHHHHHHHT------------------TCC-----GGGEEECCCHHHHHHHHHHHHTT-------------------
T ss_pred CCHHHHHHHHHC------------------CCC-----CCCCCEECCCHHHHHHHHHHHHH-------------------
T ss_conf 347888687751------------------898-----65341216724878888776542-------------------
Q ss_pred CCCCCHHH-HH-HHHHCCCCCCCEE-EEEECCC-CCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHCCCHHHHH
Q ss_conf 99861235-76-6531169998589-9970899-9999999999997501346999599999328992454106558999
Q 001492 461 PKAIPAIW-SD-VMRFLTNPHKPMI-LALSRPD-PKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLI 536 (1067)
Q Consensus 461 ~~~~~~~~-~~-~~~~~~~~~~~~I-l~vgRl~-~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~ 536 (1067)
..+... .. ........+++++ +.+=|.. ..+++..++.++..+.. ...++.++....+.. ....
T Consensus 186 --~~~~~~~~~~~~~~~~~~~~~~ilvt~H~~~~~~~~~~~i~~~l~~~~~--~~~~~~ii~p~~~~~--------~~~~ 253 (376)
T d1f6da_ 186 --SSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICHALADIAT--THQDIQIVYPVHLNP--------NVRE 253 (376)
T ss_dssp --TCHHHHHHHHTTCTTCCTTSEEEEECCCCBSSCCHHHHHHHHHHHHHHH--HCTTEEEEEECCBCH--------HHHH
T ss_pred --CCCHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH--HCCEEEEECCCCCCH--------HHHH
T ss_conf --3512321111022334777766998335411112009999999865434--214047852544321--------2444
Q ss_pred HHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCC-CCHHHHCCCC
Q ss_conf 999999762999968939999989999999971318939994499898878999999849979992887-7011001488
Q 001492 537 TVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNG-GPVDIHRALN 615 (1067)
Q Consensus 537 ~i~~l~~~~~l~~~V~~~g~~~~~dv~~ly~~A~~~~dV~i~ps~~EgfgltllEAmA~G~PVIat~~G-g~~eii~~~~ 615 (1067)
.+.+ .+....++.+...++..+...+++.| .+++-- .|-...||...|+|+|.-..+ .-++-+..+
T Consensus 254 ~~~~---~~~~~~ni~~~~~l~~~~fl~ll~~a----~~vign-----Sssgi~Ea~~lg~P~Inir~~ter~~~~~~g- 320 (376)
T d1f6da_ 254 PVNR---ILGHVKNVILIDPQEYLPFVWLMNHA----WLILTD-----SGGIQEEAPSLGKPVLVMRDTTERPEAVTAG- 320 (376)
T ss_dssp HHHH---HHTTCTTEEEECCCCHHHHHHHHHHC----SEEEES-----SSGGGGTGGGGTCCEEECSSCCSCHHHHHHT-
T ss_pred HHHH---HHCCCCCCEEECCCCHHHHHHHHHHC----EEEEEC-----CCCHHHHHHHHCCCEEECCCCCCCCCCEECC-
T ss_conf 6766---64044451332355678999998416----399836-----8506766787489889727876576412368-
Q ss_pred CEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHH
Q ss_conf 669949999999999999963199999999999989997-09989999999999999
Q 001492 616 NGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIH-LFSWPEHCRTYLTRVAA 671 (1067)
Q Consensus 616 ~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~a~~~v~-~fsw~~~a~~~l~~l~~ 671 (1067)
+-+++++ |.+++.+++.+++.++.....+ .... -|---..+++..+.++.
T Consensus 321 ~~i~v~~-~~~~I~~ai~~~l~~~~~~~~~-----~~~~npYGdG~as~rI~~iLk~ 371 (376)
T d1f6da_ 321 TVRLVGT-DKQRIVEEVTRLLKDENEYQAM-----SRAHNPYGDGQACSRILEALKN 371 (376)
T ss_dssp SEEECCS-SHHHHHHHHHHHHHCHHHHHHH-----HHSCCTTCCSCHHHHHHHHHHH
T ss_pred EEEECCC-CHHHHHHHHHHHHHCHHHHHHH-----CCCCCCCCCCHHHHHHHHHHHH
T ss_conf 0698789-9999999999997285766530-----4578989898499999999985
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.61 E-value=0.00061 Score=40.61 Aligned_cols=55 Identities=4% Similarity=0.010 Sum_probs=43.1
Q ss_pred EEEEECCCCCCCC-CHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 9998579999999-63568999999999982478983407999879998889999984499
Q 001492 779 VIALDCYDSKGAP-DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838 (1067)
Q Consensus 779 lia~D~DgTl~~~-~~~i~~~~~~al~~l~~~g~~g~i~~vvIaTGR~~~~l~~~l~~~gi 838 (1067)
.+++|.+|++... ...+.+..+++++.|++.| + .+.+.||-....+..+-+.+||
T Consensus 5 ~~~~d~~~~~~~g~~D~lr~~a~~~I~~L~~~G----i-~v~ilTGD~~~~a~~ia~~lgI 60 (135)
T d2b8ea1 5 AVIFDKTGTLTKGKPDTLKESAKPAVQELKRMG----I-KVGMITGDNWRSAEAISRELNL 60 (135)
T ss_dssp EEEEECCCCCBCSCCCCBCTTHHHHHHHHHHTT----C-EEEEECSSCHHHHHHHHHHHTC
T ss_pred EEEECCCEEEEEECCCCCCCCHHHHHHHHHHCC----C-EEEEECCCCHHHHHHHHHHHHH
T ss_conf 999989147997368899811999999999859----9-7999758633555677765422
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.35 E-value=0.00062 Score=40.58 Aligned_cols=163 Identities=13% Similarity=0.105 Sum_probs=98.9
Q ss_pred EEEEECCCC-CCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEC
Q ss_conf 999857999-9999635689999999999824789834079998799988899999844999899977998179469805
Q 001492 779 VIALDCYDS-KGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYP 857 (1067)
Q Consensus 779 lia~D~DgT-l~~~~~~i~~~~~~al~~l~~~g~~g~i~~vvIaTGR~~~~l~~~l~~~gi~~~~~d~~I~~nGs~I~~~ 857 (1067)
+++.|.+|| +.+--..+.+.++++++.+++.| + .+.+.||=+...+..+.+++||.. .+. +++..
T Consensus 4 ~~~~d~~~~~~~~~~Dp~R~~~~~~I~~l~~~G----I-~v~miTGD~~~tA~~ia~~~Gi~~--~~~-------~v~~~ 69 (168)
T d1wpga2 4 VICSDKTGTLTTNQLDPPRKEVMGSIQLCRDAG----I-RVIMITGDNKGTAIAICRRIGIFG--ENE-------EVADR 69 (168)
T ss_dssp EEEECCTTTTBCCCECCBCTTHHHHHHHHHHTT----C-EEEEECSSCHHHHHHHHHHTTSSC--TTC-------CCTTT
T ss_pred EEEECCCCEEEEEECCCCCHHHHHHHHHHHHCC----C-EEEEECCCCHHHHHHHHHHCCCCC--CCC-------CCCCC
T ss_conf 999788517888734889653999999999884----9-899989999799999999849988--764-------11100
Q ss_pred CCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHH
Q ss_conf 88754688677882324101233265026999996420135788888999983113345793489999229980578999
Q 001492 858 GTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDD 937 (1067)
Q Consensus 858 ~~~~~~~~~~~~d~~~~~~I~~~w~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~~~~~~~~~~~e 937 (1067)
.+ .+...... ...+
T Consensus 70 ------------------~~----------------~~~~~~~~--------------------------------~~~~ 83 (168)
T d1wpga2 70 ------------------AY----------------TGREFDDL--------------------------------PLAE 83 (168)
T ss_dssp ------------------EE----------------EHHHHHHS--------------------------------CHHH
T ss_pred ------------------CC----------------CCCCCCHH--------------------------------HHHH
T ss_conf ------------------03----------------46300001--------------------------------2788
Q ss_pred HHHHHHHCCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCEEEEECCCCC
Q ss_conf 99999804892899984089038980189998999999999919974537998367899885654128860899279720
Q 001492 938 LRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVE 1017 (1067)
Q Consensus 938 l~~~L~~~~~~~~v~~s~~~~~ldV~P~~asKg~Alr~L~~~~gid~~~via~~GDs~N~D~~eML~~~~~gVaMgNA~~ 1017 (1067)
+.+.+.. .. .+-.+.|. .|..-++.|.. .|. +++++||+.| | ..+|+.++.||+|+++.
T Consensus 84 ~~~~~~~----~~-------v~ar~~p~--~K~~lv~~l~~-~g~----~Va~vGDG~n-D-~~AL~~AdvGIa~~~gt- 142 (168)
T d1wpga2 84 QREACRR----AC-------CFARVEPS--HKSKIVEYLQS-YDE----ITAMTGDGVN-D-APALKKAEIGIAMGSGT- 142 (168)
T ss_dssp HHHHHHH----CC-------EEESCCHH--HHHHHHHHHHH-TTC----CEEEEECSGG-G-HHHHHHSSEEEEETTSC-
T ss_pred HHHHHHH----HH-------HHHCCCHH--HHHHHHHHHHH-CCC----CEEEEECCCC-C-HHHHHHCCEEEEECCCC-
T ss_conf 7665532----23-------00000114--78889999874-045----4047706778-8-89998598888865511-
Q ss_pred CCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHH
Q ss_conf 253554102576788777899983550576668999999996
Q 001492 1018 KGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQ 1059 (1067)
Q Consensus 1018 ~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~ 1059 (1067)
+..+..|+ ++-.+.+-..|.++++.
T Consensus 143 --~~a~~aAd---------------ivl~~~~l~~v~~~I~~ 167 (168)
T d1wpga2 143 --AVAKTASE---------------MVLADDNFSTIVAAVEE 167 (168)
T ss_dssp --HHHHHTCS---------------EEETTCCTHHHHHHHHH
T ss_pred --HHHHHHCC---------------EEECCCCHHHHHHHHHC
T ss_conf --99998489---------------99915998999999974
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=96.81 E-value=0.0027 Score=36.29 Aligned_cols=64 Identities=11% Similarity=0.162 Sum_probs=48.2
Q ss_pred EEEEEEEECCCCCCCC------CHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC---------------HHHHHHHHH
Q ss_conf 3899998579999999------6356899999999998247898340799987999---------------888999998
Q 001492 776 RLIVIALDCYDSKGAP------DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMP---------------VSETIEFLN 834 (1067)
Q Consensus 776 klilia~D~DgTl~~~------~~~i~~~~~~al~~l~~~g~~g~i~~vvIaTGR~---------------~~~l~~~l~ 834 (1067)
|-++| |+|||+..+ ...+.+.+.+.++.+.+.| + .++|.|+|. ...+.+||.
T Consensus 2 K~i~~--DiDGTI~~~~~~~y~~~~P~~~~Ie~l~~l~~~G---~--~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~ 74 (124)
T d1xpja_ 2 KKLIV--DLDGTLTQANTSDYRNVLPRLDVIEQLREYHQLG---F--EIVISTARNMRTYEGNVGKINIHTLPIITEWLD 74 (124)
T ss_dssp CEEEE--CSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHTT---C--EEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHH
T ss_pred CEEEE--ECCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCC---C--EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999--3788728899998273684899999999999879---9--899995687545577577878889999999999
Q ss_pred HCCCCCCCCCEEEEC
Q ss_conf 449998999779981
Q 001492 835 SMKIEANEFDALICS 849 (1067)
Q Consensus 835 ~~gi~~~~~d~~I~~ 849 (1067)
.+|++ +|-++..
T Consensus 75 ~~gI~---Yd~Li~g 86 (124)
T d1xpja_ 75 KHQVP---YDEILVG 86 (124)
T ss_dssp HTTCC---CSEEEEC
T ss_pred HCCCC---CEEEEEC
T ss_conf 82998---2388879
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=96.76 E-value=0.00045 Score=41.51 Aligned_cols=76 Identities=12% Similarity=0.040 Sum_probs=56.5
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEE
Q ss_conf 89998999999999919974537998367899885654128860899279720253554102576788777899983550
Q 001492 965 LLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHV 1044 (1067)
Q Consensus 965 ~~asKg~Alr~L~~~~gid~~~via~~GDs~N~D~~eML~~~~~gVaMgNA~~~~~~~~~~a~~~~~d~~~~~~~~~~~v 1044 (1067)
....|+..++.++++++++.+++++ +||+.| | ++|++.++.++||++.. ...+.... | ++
T Consensus 142 ~~~~k~~~~~~~~~~~~~~~~~~i~-iGDs~~-D-l~~a~~A~~~~a~~~~~---~~~~~~~~-----------~---~~ 201 (226)
T d2feaa1 142 CSNQCGCCKPSVIHELSEPNQYIIM-IGDSVT-D-VEAAKLSDLCFARDYLL---NECREQNL-----------N---HL 201 (226)
T ss_dssp CCSCCSSCHHHHHHHHCCTTCEEEE-EECCGG-G-HHHHHTCSEEEECHHHH---HHHHHTTC-----------C---EE
T ss_pred CCCCCHHHHHHHHHHHCCCCCEEEE-EECCHH-H-HHHHHHCCEEEEECCHH---HHHHHCCC-----------C---EE
T ss_conf 5567899999999984678863899-807631-3-99999889978706467---99998299-----------8---36
Q ss_pred CCCCCHHHHHHHHHHHC
Q ss_conf 57666899999999625
Q 001492 1045 NANAKVDEIANALRQVG 1061 (1067)
Q Consensus 1045 t~~~~~dgI~~al~~~g 1061 (1067)
. --+-++|...|+++-
T Consensus 202 ~-~~d~~~i~~~l~~~~ 217 (226)
T d2feaa1 202 P-YQDFYEIRKEIENVK 217 (226)
T ss_dssp C-CSSHHHHHHHHHTSH
T ss_pred E-CCCHHHHHHHHHHHH
T ss_conf 2-499999999999987
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.24 E-value=0.0031 Score=35.97 Aligned_cols=57 Identities=12% Similarity=0.188 Sum_probs=44.2
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCEEEEECCCCCCCHHHHHCCC
Q ss_conf 899989999999999199745379983678998856541288608992797202535541025
Q 001492 965 LLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTT 1027 (1067)
Q Consensus 965 ~~asKg~Alr~L~~~~gid~~~via~~GDs~N~D~~eML~~~~~gVaMgNA~~~~~~~~~~a~ 1027 (1067)
....|+..++.++...+ ++++++ +||+.| | +.|++.++.+|||++.. ...+.+..++
T Consensus 150 ~~~~K~~~v~~~~~~~~--~~~~~~-vGDs~~-D-i~~~~~ag~~va~~~~~-~~~~~~~~ad 206 (217)
T d1nnla_ 150 ESGGKGKVIKLLKEKFH--FKKIIM-IGDGAT-D-MEACPPADAFIGFGGNV-IRQQVKDNAK 206 (217)
T ss_dssp STTHHHHHHHHHHHHHC--CSCEEE-EESSHH-H-HTTTTTSSEEEEECSSC-CCHHHHHHCS
T ss_pred CCCHHHHHHHHHHHCCC--CCCCEE-EEECHH-H-HHHHHHCCCEEEECCCH-HHHHHHHHCC
T ss_conf 42208999999986348--666389-971786-5-99898689219979877-7899998689
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=96.24 E-value=0.003 Score=36.06 Aligned_cols=70 Identities=19% Similarity=0.112 Sum_probs=47.7
Q ss_pred EEEEECCCCCCCC----CHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHH---HHHHHHHHCCCCCCCCCEEEECCC
Q ss_conf 9998579999999----635689999999999824789834079998799988---899999844999899977998179
Q 001492 779 VIALDCYDSKGAP----DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVS---ETIEFLNSMKIEANEFDALICSSG 851 (1067)
Q Consensus 779 lia~D~DgTl~~~----~~~i~~~~~~al~~l~~~g~~g~i~~vvIaTGR~~~---~l~~~l~~~gi~~~~~d~~I~~nG 851 (1067)
-+++|+|||+... ..++.+...+.|+.+.++| + .++|.|+|+-. ....||...+++ +|.+.-...
T Consensus 2 ti~vDiDGTl~~~~~~~~~kPi~~~Ie~l~~L~~~G---~--~IIi~TaR~~~~~~~t~~wL~~~~i~---yd~i~~~~~ 73 (122)
T d2obba1 2 TIAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQEK---H--RLILWSVREGELLDEAIEWCRARGLE---FYAANKDYP 73 (122)
T ss_dssp EEEECCBTTTBCSCTTSCCCBCTTHHHHHHHHHHTT---C--EEEECCSCCHHHHHHHHHHHHTTTCC---CSEESSSST
T ss_pred EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC---C--EEEEEECCCCCCHHHHHHHHHHCCCC---CEEHHCCCC
T ss_conf 899975797088999763664599999999999879---9--69999358886538899999981998---345010576
Q ss_pred CEEEE
Q ss_conf 46980
Q 001492 852 GEMYY 856 (1067)
Q Consensus 852 s~I~~ 856 (1067)
-.+.+
T Consensus 74 ~~~~~ 78 (122)
T d2obba1 74 EEERD 78 (122)
T ss_dssp TC---
T ss_pred CCCCC
T ss_conf 68664
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=96.18 E-value=0.0067 Score=33.68 Aligned_cols=45 Identities=13% Similarity=-0.009 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCE-EEEECCCC
Q ss_conf 8999999999919974537998367899885654128860-89927972
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHK-TLIMKGVV 1016 (1067)
Q Consensus 969 Kg~Alr~L~~~~gid~~~via~~GDs~N~D~~eML~~~~~-gVaMgNA~ 1016 (1067)
....+...++++++++++++. +||+.+ | +.+=..+|. ++.+.+..
T Consensus 131 ~p~ml~~a~~~~~i~~~~~~~-VGD~~~-D-i~aA~~AGi~~i~v~~g~ 176 (209)
T d2o2xa1 131 NPGMLVEAGKRLALDLQRSLI-VGDKLA-D-MQAGKRAGLAQGWLVDGE 176 (209)
T ss_dssp SCHHHHHHHHHHTCCGGGCEE-EESSHH-H-HHHHHHTTCSEEEEETCC
T ss_pred CCHHHHHHHHHHCCCCCCEEE-ECCCHH-H-HHHHHHCCCCEEEEECCC
T ss_conf 201566767773899412689-579788-9-999998799489994899
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=95.76 E-value=0.00048 Score=41.31 Aligned_cols=155 Identities=12% Similarity=0.048 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCHHHH
Q ss_conf 68999999999982478983407999879998889999984499989997799817946980588754688677882324
Q 001492 795 MIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYA 874 (1067)
Q Consensus 795 i~~~~~~al~~l~~~g~~g~i~~vvIaTGR~~~~l~~~l~~~gi~~~~~d~~I~~nGs~I~~~~~~~~~~~~~~~d~~~~ 874 (1067)
+.+.++++|+.+++.| + .++++||++...+...++.+|+.. .|+...+..|.+
T Consensus 216 p~~~v~~~l~~lk~aG----i-~v~i~Tg~~~~~a~~il~~lgl~~-~F~~~~i~~~~d--------------------- 268 (380)
T d1qyia_ 216 PVDEVKVLLNDLKGAG----F-ELGIATGRPYTETVVPFENLGLLP-YFEADFIATASD--------------------- 268 (380)
T ss_dssp CHHHHHHHHHHHHHTT----C-EEEEECSSCHHHHHHHHHHHTCGG-GSCGGGEECHHH---------------------
T ss_pred CHHHHHHHHHHHHHCC----C-EEEEECCCCHHHHHHHHHHCCCCC-CCCCCEEEECCH---------------------
T ss_conf 4363999999999879----9-599988997999999999819953-478505874413---------------------
Q ss_pred HCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 10123326502699999642013578888899998311334579348999922998057899999999804892899984
Q 001492 875 SHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDLRQKLRMRGLRCHPMYC 954 (1067)
Q Consensus 875 ~~I~~~w~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s 954 (1067)
+.......+...... .|.. . -+...+.
T Consensus 269 -----------~~~~~~~~~~~~~~~---------------------------KP~p-~---~~~~~~~----------- 295 (380)
T d1qyia_ 269 -----------VLEAENMYPQARPLG---------------------------KPNP-F---SYIAALY----------- 295 (380)
T ss_dssp -----------HHHHHHHSTTSCCCC---------------------------TTST-H---HHHHHHH-----------
T ss_pred -----------HHHHHHHCCCCCCCC---------------------------CCCH-H---HHHHHHH-----------
T ss_conf -----------331122033110236---------------------------9986-9---9999999-----------
Q ss_pred ECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCC---EEEEECCCCCCCHHH-H-HCCCCC
Q ss_conf 08903898018999899999999991997453799836789988565412886---089927972025355-4-102576
Q 001492 955 RNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAH---KTLIMKGVVEKGSEE-L-LRTTNL 1029 (1067)
Q Consensus 955 ~~~~~ldV~P~~asKg~Alr~L~~~~gid~~~via~~GDs~N~D~~eML~~~~---~gVaMgNA~~~~~~~-~-~~a~~~ 1029 (1067)
.+.+.| .....+.+.++++.+.+++ +||+.| | ..|.+.++ .||+||.......+. . ..|+
T Consensus 296 ----~~~~~~------~~k~~iv~~~~~~~~~~~~-vGD~~~-D-~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD-- 360 (380)
T d1qyia_ 296 ----GNNRDK------YESYINKQDNIVNKDDVFI-VGDSLA-D-LLSAQKIGATFIGTLTGLKGKDAAGELEAHHAD-- 360 (380)
T ss_dssp ----CCCGGG------HHHHHHCCTTCSCTTTEEE-EESSHH-H-HHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCS--
T ss_pred ----HCCCCH------HHHHHHHHHHCCCCCEEEE-ECCCHH-H-HHHHHHCCCCEEEEECCCCCCCCHHHHHHCCCC--
T ss_conf ----808877------8899999973899886999-889989-9-999998799889994588886437789767999--
Q ss_pred CCCCCCCCCCCCEEECCCCCHHHHHHHHHH
Q ss_conf 788777899983550576668999999996
Q 001492 1030 RDDIVPSESPLIAHVNANAKVDEIANALRQ 1059 (1067)
Q Consensus 1030 ~~d~~~~~~~~~~~vt~~~~~dgI~~al~~ 1059 (1067)
++-++.. .|.+.|..
T Consensus 361 -------------~ii~~~~--el~~il~~ 375 (380)
T d1qyia_ 361 -------------YVINHLG--ELRGVLDN 375 (380)
T ss_dssp -------------EEESSGG--GHHHHHSC
T ss_pred -------------EEECCHH--HHHHHHHH
T ss_conf -------------9988999--99999999
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=95.73 E-value=0.0079 Score=33.21 Aligned_cols=46 Identities=7% Similarity=0.086 Sum_probs=34.4
Q ss_pred CCCEEEEEEEECCCCCCCC------------CHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
Q ss_conf 6783899998579999999------------6356899999999998247898340799987999
Q 001492 773 RRRRLIVIALDCYDSKGAP------------DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMP 825 (1067)
Q Consensus 773 ~~kklilia~D~DgTl~~~------------~~~i~~~~~~al~~l~~~g~~g~i~~vvIaTGR~ 825 (1067)
.+.|.++| |+||||.+. ...+.+.+.++++.++++| . .++++|||+
T Consensus 5 ~kpk~vif--DiDgTL~~~~~~~~~~~~~~~~~~~~p~v~~~l~~l~~~G----~-~Iii~T~R~ 62 (149)
T d1ltqa1 5 GKPKAVIF--DVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALMG----Y-QIVVVSGRE 62 (149)
T ss_dssp TSCEEEEE--ETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHTT----C-EEEEEECSC
T ss_pred CCCCEEEE--ECCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC----C-EEEEEECCC
T ss_conf 99968999--7488838278987577333040844878999999998444----8-089992685
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=94.22 E-value=0.039 Score=28.58 Aligned_cols=37 Identities=16% Similarity=0.254 Sum_probs=25.3
Q ss_pred HHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCEEE
Q ss_conf 9999999991997453799836789988565412886089
Q 001492 971 QALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTL 1010 (1067)
Q Consensus 971 ~Alr~L~~~~gid~~~via~~GDs~N~D~~eML~~~~~gV 1010 (1067)
..+.+++++||+++++++. +||+.. | +.+=..+|...
T Consensus 108 ~~~~~~~~~~~id~~~~~~-IGD~~~-D-i~aA~~aG~~~ 144 (161)
T d2fpwa1 108 KLVERYLAEQAMDRANSYV-IGDRAT-D-IQLAENMGING 144 (161)
T ss_dssp GGGGGGC----CCGGGCEE-EESSHH-H-HHHHHHHTSEE
T ss_pred HHHHHHHHHCCCCHHCEEE-ECCCHH-H-HHHHHHCCCEE
T ss_conf 8999998761989404899-899899-9-99999869909
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=94.07 E-value=0.048 Score=27.99 Aligned_cols=189 Identities=12% Similarity=0.052 Sum_probs=83.1
Q ss_pred CEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHH-HHHHHHHCCCCCCCCCEEEECCCCE
Q ss_conf 838999985799999996356899999999998247898340799987999888-9999984499989997799817946
Q 001492 775 RRLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSE-TIEFLNSMKIEANEFDALICSSGGE 853 (1067)
Q Consensus 775 kklilia~D~DgTl~~~~~~i~~~~~~al~~l~~~g~~g~i~~vvIaTGR~~~~-l~~~l~~~gi~~~~~d~~I~~nGs~ 853 (1067)
||+++| |+|||+.+......+...+++..+.... ... ...-..|+.... +...+...+++. ...... -.
T Consensus 2 ~klviF--D~DGTL~d~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~ 71 (228)
T d2hcfa1 2 RTLVLF--DIDGTLLKVESMNRRVLADALIEVYGTE--GST-GSHDFSGKMDGAIIYEVLSNVGLER----AEIADK-FD 71 (228)
T ss_dssp CEEEEE--CCBTTTEEECTHHHHHHHHHHHHHHSCC--CCC----CCTTCCHHHHHHHHHHTTTCCH----HHHHHH-HH
T ss_pred CEEEEE--ECCCCCCCCHHHHHHHHHHHHHHHCCCC--CCH-HHHHHHCCCHHHHHHHHHHHHCCCH----HHHHHH-HH
T ss_conf 629999--0899755588999999999999971898--627-8999855860799999999818986----777999-99
Q ss_pred EEECCCCCCCCCCCCCCHHHHHCCCC--CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
Q ss_conf 98058875468867788232410123--3265026999996420135788888999983113345793489999229980
Q 001492 854 MYYPGTYTEEGGKLFPDPDYASHIDY--RWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSK 931 (1067)
Q Consensus 854 I~~~~~~~~~~~~~~~d~~~~~~I~~--~w~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~~~~~~ 931 (1067)
..+. .+ ...+..+... .-..+++...+..+.. .....+..... ..
T Consensus 72 ~~~~--------~~--~~~~~~~~~~~~~~~~~g~~~~L~~L~~---------------------~g~~~~~v~t~-~~- 118 (228)
T d2hcfa1 72 KAKE--------TY--IALFRERARREDITLLEGVRELLDALSS---------------------RSDVLLGLLTG-NF- 118 (228)
T ss_dssp HHHH--------HH--HHHHHHHCCGGGEEECTTHHHHHHHHHT---------------------CTTEEEEEECS-SC-
T ss_pred HHHH--------HH--HHHHHHHHHCCCCEECCCHHHHHHHHHC---------------------CCCCCCCCCCC-CC-
T ss_conf 9999--------99--9999997420485106852888765411---------------------23112235578-85-
Q ss_pred HHHHHHHHHHHHHCCCC--EEEEEEECCEEEEEECCCCCHHHHHHHHHHHH--CCCCCCEEEEECCCCCCCHHHHHCCCC
Q ss_conf 57899999999804892--89998408903898018999899999999991--997453799836789988565412886
Q 001492 932 ARRIDDLRQKLRMRGLR--CHPMYCRNSTRMQIVPLLASRSQALRYLFVRW--RLNVANMFVILGESGDTDYEELISGAH 1007 (1067)
Q Consensus 932 ~~~~~el~~~L~~~~~~--~~v~~s~~~~~ldV~P~~asKg~Alr~L~~~~--gid~~~via~~GDs~N~D~~eML~~~~ 1007 (1067)
. ..+...+...++. +..+.+.+. +....-....++.++.... +++++++++ |||+.+ | +.+=..+|
T Consensus 119 ~---~~~~~~l~~~gl~~~fd~i~~~~~----~~~~k~~p~~~~~~~~~~~~~~~~p~~~l~-VGD~~~-D-i~aA~~aG 188 (228)
T d2hcfa1 119 E---ASGRHKLKLPGIDHYFPFGAFADD----ALDRNELPHIALERARRMTGANYSPSQIVI-IGDTEH-D-IRCARELD 188 (228)
T ss_dssp H---HHHHHHHHTTTCSTTCSCEECTTT----CSSGGGHHHHHHHHHHHHHCCCCCGGGEEE-EESSHH-H-HHHHHTTT
T ss_pred C---HHHHHHHHHHCCCCCCCCCCCCCC----CCCCCCHHHHHHHHHHHHCCCCCCHHHHEE-ECCCHH-H-HHHHHHCC
T ss_conf 0---000012332012222222222233----443454157788876530024877668023-248727-8-99999849
Q ss_pred EE-EEE--CCCC
Q ss_conf 08-992--7972
Q 001492 1008 KT-LIM--KGVV 1016 (1067)
Q Consensus 1008 ~g-VaM--gNA~ 1016 (1067)
.. |++ |+..
T Consensus 189 ~~~i~v~~g~~~ 200 (228)
T d2hcfa1 189 ARSIAVATGNFT 200 (228)
T ss_dssp CEEEEECCSSSC
T ss_pred CEEEEECCCCCC
T ss_conf 979998079999
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=94.02 E-value=0.0075 Score=33.39 Aligned_cols=46 Identities=20% Similarity=0.349 Sum_probs=38.5
Q ss_pred CHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCE-EEEECCCC
Q ss_conf 98999999999919974537998367899885654128860-89927972
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHK-TLIMKGVV 1016 (1067)
Q Consensus 968 sKg~Alr~L~~~~gid~~~via~~GDs~N~D~~eML~~~~~-gVaMgNA~ 1016 (1067)
.+...++++++++|+++++++. +||+.+ | +.+-..+|. +|.+.+..
T Consensus 138 p~~~~~~~~~~~~~~~p~~~l~-VgD~~~-D-i~~A~~~G~~~i~v~~~~ 184 (204)
T d2go7a1 138 PSPEAATYLLDKYQLNSDNTYY-IGDRTL-D-VEFAQNSGIQSINFLEST 184 (204)
T ss_dssp TSSHHHHHHHHHHTCCGGGEEE-EESSHH-H-HHHHHHHTCEEEESSCCS
T ss_pred HHHHHHHHHHHHHCCCCCEEEE-EECCHH-H-HHHHHHCCCEEEEECCCC
T ss_conf 2578889999982999751899-947989-9-999998699699984799
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=93.39 E-value=0.17 Score=24.36 Aligned_cols=112 Identities=15% Similarity=0.081 Sum_probs=62.3
Q ss_pred HCCCCCCCEEE-EEE-CCCCCCC--HHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 11699985899-970-8999999--9999999975013469995999993289924541065589999999997629999
Q 001492 474 FLTNPHKPMIL-ALS-RPDPKKN--ITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYG 549 (1067)
Q Consensus 474 ~~~~~~~~~Il-~vg-Rl~~~Kg--i~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~ 549 (1067)
+....+++.|+ ..| +..+.|. ....++....+.. +...+ +++|+..+.+. ...+...........
T Consensus 174 ~~~~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~--~~~~i-vl~g~~~e~~~--------~~~~~~~~~~~~~~~ 242 (348)
T d1pswa_ 174 FSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLID--EGYQV-VLFGSAKDHEA--------GNEILAALNTEQQAW 242 (348)
T ss_dssp TTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHH--TTCEE-EECCCGGGHHH--------HHHHHTTSCHHHHTT
T ss_pred HCCCCCCCEEEECCCCCHHHCCCCCHHHHHHHHHHHHH--CCCCC-CCCCCCCHHHH--------HHHHHHHHHCCCCCC
T ss_conf 33355787699535532232216446777666777764--48742-22444105999--------888887631014653
Q ss_pred CEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCC
Q ss_conf 68939999989999999971318939994499898878999999849979992887
Q 001492 550 QVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNG 605 (1067)
Q Consensus 550 ~V~~~g~~~~~dv~~ly~~A~~~~dV~i~ps~~EgfgltllEAmA~G~PVIat~~G 605 (1067)
.+.+.|..+..++..++..| +++|-+. .-.+--|.|+|+|+|+--.+
T Consensus 243 ~~~l~g~~sl~el~~li~~a----~l~I~~D-----tg~~HlAaa~g~p~i~lfg~ 289 (348)
T d1pswa_ 243 CRNLAGETQLDQAVILIAAC----KAIVTND-----SGLMHVAAALNRPLVALYGP 289 (348)
T ss_dssp EEECTTTSCHHHHHHHHHTS----SEEEEES-----SHHHHHHHHTTCCEEEEESS
T ss_pred CCCCCCCCCHHHHHHHHHCC----EEEEECC-----CCHHHHHHHCCCCEEEEECC
T ss_conf 33555774378899987433----0576158-----60889999829998999789
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.78 E-value=0.078 Score=26.61 Aligned_cols=66 Identities=14% Similarity=0.199 Sum_probs=49.0
Q ss_pred CCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 99899999999991997453799836789988565412886089927972025355410257678877789998355057
Q 001492 967 ASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNA 1046 (1067)
Q Consensus 967 asKg~Alr~L~~~~gid~~~via~~GDs~N~D~~eML~~~~~gVaMgNA~~~~~~~~~~a~~~~~d~~~~~~~~~~~vt~ 1046 (1067)
-.|...+..+++++|+++++++. |||+.. | +..-+.+|...+. |..
T Consensus 98 kp~~~~~~~~~~~~~~~~~~~l~-igD~~~-d-i~aA~~aG~~~i~-------------------------------v~~ 143 (164)
T d1u7pa_ 98 GSKVTHFERLHHKTGVPFSQMVF-FDDENR-N-IIDVGRLGVTCIH-------------------------------IRD 143 (164)
T ss_dssp SCHHHHHHHHHHHHCCCGGGEEE-EESCHH-H-HHHHHTTTCEEEE-------------------------------CSS
T ss_pred CCCHHHHHHHHHHHCCCHHHEEE-ECCCHH-H-HHHHHHCCCEEEE-------------------------------ECC
T ss_conf 89769999999996888699798-748787-8-9999986997999-------------------------------799
Q ss_pred CCCHHHHHHHHHHHCCCCCC
Q ss_conf 66689999999962555789
Q 001492 1047 NAKVDEIANALRQVGKASVG 1066 (1067)
Q Consensus 1047 ~~~~dgI~~al~~~g~~~~~ 1066 (1067)
++..+.+.++++.|.....|
T Consensus 144 G~~~~~~~~~l~~f~~~~a~ 163 (164)
T d1u7pa_ 144 GMSLQTLTQGLETFAKAQAG 163 (164)
T ss_dssp CCCHHHHHHHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHHHHHHHCC
T ss_conf 99869999999999886028
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=91.24 E-value=0.053 Score=27.72 Aligned_cols=44 Identities=9% Similarity=0.085 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEEC
Q ss_conf 99999999998247898340799987999888999998449998999779981
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~vvIaTGR~~~~l~~~l~~~gi~~~~~d~~I~~ 849 (1067)
+.+.++++.++++| + .++|+|+-....+..+++.+++ ++.++|+
T Consensus 78 pg~~~~l~~L~~~g----~-~~~ivS~~~~~~i~~~l~~l~~----~~~~~an 121 (226)
T d2feaa1 78 EGFREFVAFINEHE----I-PFYVISGGMDFFVYPLLEGIVE----KDRIYCN 121 (226)
T ss_dssp TTHHHHHHHHHHHT----C-CEEEEEEEEHHHHHHHHTTTSC----GGGEEEE
T ss_pred HHHHHHHHHHHHCC----C-CCCCCCCCHHHHHHHHHHHCCC----CCCEEEE
T ss_conf 99999999998542----5-3115775306669999998099----5014543
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.08 E-value=0.13 Score=25.12 Aligned_cols=38 Identities=11% Similarity=0.009 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 9999999999824789834079998799988899999844999
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~vvIaTGR~~~~l~~~l~~~gi~ 839 (1067)
+.++++++.++++| + .++|+||=....+..+++.+|++
T Consensus 85 pg~~~~i~~lk~~G----~-~~~ivS~~~~~~v~~i~~~lgi~ 122 (217)
T d1nnla_ 85 PGIRELVSRLQERN----V-QVFLISGGFRSIVEHVASKLNIP 122 (217)
T ss_dssp TTHHHHHHHHHHTT----C-EEEEEEEEEHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHCC----C-EEEEECCCCHHHHHHHHHHHCCC
T ss_conf 77999999997379----9-79998999358888889870996
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=88.89 E-value=0.48 Score=21.38 Aligned_cols=70 Identities=11% Similarity=0.134 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCE--EEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 8999999999919974537998367899885654128860--89927972025355410257678877789998355057
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHK--TLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNA 1046 (1067)
Q Consensus 969 Kg~Alr~L~~~~gid~~~via~~GDs~N~D~~eML~~~~~--gVaMgNA~~~~~~~~~~a~~~~~d~~~~~~~~~~~vt~ 1046 (1067)
...-+...+++|++++++++. +||+.+ | +.+=..+|. .+.+.+.....++....++ |+-+
T Consensus 110 ~p~m~~~~~~~~~i~~~~s~m-VGDs~~-D-i~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad---------------~v~~ 171 (182)
T d2gmwa1 110 HPGMLLSARDYLHIDMAASYM-VGDKLE-D-MQAAVAANVGTKVLVRTGKPITPEAENAAD---------------WVLN 171 (182)
T ss_dssp SCHHHHHHHHHHTBCGGGCEE-EESSHH-H-HHHHHHTTCSEEEEESSSSCCCHHHHHHCS---------------EEES
T ss_pred CCCCCCCHHHHCCCCCCCCCC-CCCCHH-H-HHHHHHHCCCCEEEECCCCCCCCCCCCCCC---------------EEEC
T ss_conf 432231012211655344512-279899-9-999998288847998999777721024798---------------8989
Q ss_pred CCCHHHHHHHHH
Q ss_conf 666899999999
Q 001492 1047 NAKVDEIANALR 1058 (1067)
Q Consensus 1047 ~~~~dgI~~al~ 1058 (1067)
+.. ++.+.++
T Consensus 172 ~l~--dl~~~ik 181 (182)
T d2gmwa1 172 SLA--DLPQAIK 181 (182)
T ss_dssp CGG--GHHHHHH
T ss_pred CHH--HHHHHHC
T ss_conf 999--9999963
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=88.40 E-value=0.51 Score=21.17 Aligned_cols=57 Identities=12% Similarity=0.061 Sum_probs=39.3
Q ss_pred EEEEEEEECCCCCCCC------------------------CHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHH-HHH
Q ss_conf 3899998579999999------------------------635689999999999824789834079998799988-899
Q 001492 776 RLIVIALDCYDSKGAP------------------------DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVS-ETI 830 (1067)
Q Consensus 776 klilia~D~DgTl~~~------------------------~~~i~~~~~~al~~l~~~g~~g~i~~vvIaTGR~~~-~l~ 830 (1067)
|+++| |+||||.+. .-.+-+.++++|+.|+++| + .++|+|+.+.. ...
T Consensus 6 K~viF--DlDGTL~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~pgv~e~L~~L~~~G----~-~~~v~S~~~~~~~~~ 78 (164)
T d1u7pa_ 6 KLAVF--DLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLG----V-PVAAASRTSEIQGAN 78 (164)
T ss_dssp SEEEE--CCBTTTBSSCTTTTCCSCEEECTTSCEEETTCCEECCCTTHHHHHHHHHHTT----C-CEEEEECCSCHHHHH
T ss_pred CEEEE--CCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHCC----C-CEEEEECCCCCHHHC
T ss_conf 79999--1877420771330358517677336176653640460557999999999789----9-489973566210100
Q ss_pred HHHHHCCCC
Q ss_conf 999844999
Q 001492 831 EFLNSMKIE 839 (1067)
Q Consensus 831 ~~l~~~gi~ 839 (1067)
.+++.+++.
T Consensus 79 ~~l~~~~~~ 87 (164)
T d1u7pa_ 79 QLLELFDLG 87 (164)
T ss_dssp HHHHHTTCG
T ss_pred CCHHCCCCC
T ss_conf 000002333
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=88.16 E-value=0.33 Score=22.46 Aligned_cols=46 Identities=15% Similarity=0.238 Sum_probs=33.6
Q ss_pred CCCH--HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCEEEEECCCC
Q ss_conf 9998--99999999991997453799836789988565412886089927972
Q 001492 966 LASR--SQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVV 1016 (1067)
Q Consensus 966 ~asK--g~Alr~L~~~~gid~~~via~~GDs~N~D~~eML~~~~~gVaMgNA~ 1016 (1067)
+..| .......++++++ ++++. |||+.+ | +.+-+.+|...+.=+..
T Consensus 131 ~~~KP~p~~~~~~~~~~~~--~~~l~-vgDs~~-D-i~aA~~aG~~~i~v~~~ 178 (187)
T d2fi1a1 131 FKRKPNPESMLYLREKYQI--SSGLV-IGDRPI-D-IEAGQAAGLDTHLFTSI 178 (187)
T ss_dssp CCCTTSCHHHHHHHHHTTC--SSEEE-EESSHH-H-HHHHHHTTCEEEECSCH
T ss_pred CCCCCCHHHHHHHHHHCCC--CCEEE-EECCHH-H-HHHHHHCCCEEEEECCC
T ss_conf 4568889999999998499--97699-907999-9-99999859979999998
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=85.99 E-value=0.36 Score=22.20 Aligned_cols=66 Identities=11% Similarity=0.061 Sum_probs=41.8
Q ss_pred EEEEEEEECCCCCCC-------C-CHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCH---------------HHHHHH
Q ss_conf 389999857999999-------9-63568999999999982478983407999879998---------------889999
Q 001492 776 RLIVIALDCYDSKGA-------P-DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPV---------------SETIEF 832 (1067)
Q Consensus 776 klilia~D~DgTl~~-------~-~~~i~~~~~~al~~l~~~g~~g~i~~vvIaTGR~~---------------~~l~~~ 832 (1067)
+++|| |.|||+.. + +-++.+.+.++|+.|+++| + .++++|..+- ..+...
T Consensus 3 ~Av~~--DrDGtl~~~~~y~~~~~~~~~~~gv~e~l~~L~~~g----~-~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~ 75 (182)
T d2gmwa1 3 PAIFL--DRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKKMG----F-ALVVVTNQSGIARGKFTEAQFETLTEWMDWS 75 (182)
T ss_dssp CEEEE--CSBTTTBCCCSSCCSGGGCCBCTTHHHHHHHHHHTT----C-EEEEEEECTHHHHTSSCHHHHHHHHHHHHHH
T ss_pred CEEEE--ECCCCCCCCCCCCCCHHHEEECCCHHHHHHHHHHCC----C-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88999--489985488998998899368878999999986618----4-1666642202355666787654010124455
Q ss_pred HHHCCCCCCCCCEEEECC
Q ss_conf 984499989997799817
Q 001492 833 LNSMKIEANEFDALICSS 850 (1067)
Q Consensus 833 l~~~gi~~~~~d~~I~~n 850 (1067)
+...++.. .+.++|.+
T Consensus 76 ~~~~~~~~--~~~~~cp~ 91 (182)
T d2gmwa1 76 LADRDVDL--DGIYYCPH 91 (182)
T ss_dssp HHHTTCCC--SEEEEECC
T ss_pred HHHHCCCC--CCEEECCC
T ss_conf 55401344--54056553
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=84.25 E-value=0.83 Score=19.76 Aligned_cols=39 Identities=10% Similarity=0.078 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEEEECCCCHH---HHHHHH-HHCCCCC
Q ss_conf 9999999999824789834079998799988---899999-8449998
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVS---ETIEFL-NSMKIEA 840 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~vvIaTGR~~~---~l~~~l-~~~gi~~ 840 (1067)
+..+++++.++++| + .++++|||+.. .+.+.| +.+|++.
T Consensus 89 pga~~fl~~~~~~G----v-~IfyVTnR~~~~~e~T~~nL~K~lG~p~ 131 (209)
T d2b82a1 89 EVARQLIDMHVRRG----D-AIFFVTGRSPTKTETVSKTLADNFHIPA 131 (209)
T ss_dssp HHHHHHHHHHHHHT----C-EEEEEECSCCCSSCCHHHHHHHHTTCCT
T ss_pred HHHHHHHHHHHHCC----C-EEEEEECCCHHHHHHHHHHHHHHCCCCC
T ss_conf 24999999999759----7-4999938845657999999998719874
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=83.91 E-value=0.3 Score=22.69 Aligned_cols=71 Identities=10% Similarity=0.174 Sum_probs=42.5
Q ss_pred CCCCCCCEEEEEEEECCCCCCCC-----------CHH-HHHHHHHHHHHHHHCCCCCCEEEEEEECCC--------CHHH
Q ss_conf 54446783899998579999999-----------635-689999999999824789834079998799--------9888
Q 001492 769 PMLRRRRRLIVIALDCYDSKGAP-----------DKK-MIQIMYDVFKAVRLDHQTARVTGFALSTAM--------PVSE 828 (1067)
Q Consensus 769 ~~~~~~kklilia~D~DgTl~~~-----------~~~-i~~~~~~al~~l~~~g~~g~i~~vvIaTGR--------~~~~ 828 (1067)
+.++.++|+++| |.|||+..+ +-. +.+.+.++|+.+.++| . .++|+|-- +...
T Consensus 15 ~~~~~~~Kia~f--DrDGtLik~~~~~~~~~~~~d~~~l~~~v~~~i~~L~~~g----y-~iiIvTNQ~gI~rg~~s~~~ 87 (195)
T d1yj5a1 15 SGVKPQGKVAAF--DLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAEG----Y-KLVIFTNQMGIGRGKLPAEV 87 (195)
T ss_dssp TTCCCCSCEEEE--CSBTTTEECSSSCSSCSSTTCCEESCTTHHHHHHHHHHHT----C-EEEEEEECHHHHHTSSCHHH
T ss_pred CCCCCCCCEEEE--ECCCCEEEECCCCCCCCCHHHCEECCCCHHHHHHHHHHCC----C-EEEEECCCCHHCCCCCCHHH
T ss_conf 998876808999--7899517548998678984663451677999999998678----4-79995276301048769999
Q ss_pred H----HHHHHHCCCCCCCCCEEEEC
Q ss_conf 9----99998449998999779981
Q 001492 829 T----IEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 829 l----~~~l~~~gi~~~~~d~~I~~ 849 (1067)
+ ..++++++++ .+.++|.
T Consensus 88 ~~~~~~~i~~~l~~~---~~i~~~~ 109 (195)
T d1yj5a1 88 FKGKVEAVLEKLGVP---FQVLVAT 109 (195)
T ss_dssp HHHHHHHHHHHHTSC---CEEEEEC
T ss_pred HHHHHHHHHHHCCCC---CCEEEEC
T ss_conf 999999999986998---6489815
|