Citrus Sinensis ID: 001571

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050-

MESLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRDQSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPSAWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQTGDKSEISVIEAKLAWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQLINVTDSGLHSQRYCELSKQRLDRAILTFFQHFRKSYVGDQAMHSSKLYARLSELLGLHDHLLLLNVIVGKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFLEEYRCSRSRTTFYYTIGWLIFMEESPVKFKSSMDPLLQVFISLESTPDSMFRTDAVKCALIGLMRDLRGIAMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQCAAAVDNLAAFYFNNITMGEAPTSPAAINLARHIVECPTLFPEILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQVFSDLKAQILTSQPVDQHQRLSVCFDKLMADVARSLDSKNRDKFTQNLTVFRHEFRVK

cccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccccHHHHHccHHHHHHHHHHHHcccccccHHHcHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcc

cHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccccccccccccccEEcccHcHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccHHHHHccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHccHHHHHHHHHHHHHHHHcccHHHccccccHHHHHHHHHHHHHHHHHHHccHHHccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHHHHEccHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccHHHccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccEcccEEEEccccHHHHHHHHHHHHHccccHHHHHHcHHHHHHHHHHHHHHHHHcHHHHHcccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccc

MESLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLtkfgwfdddrFRDLVKESTNFLSQATSDHYAIGLKILNQLVSemnqpnpglpsthhrrvacsfrdqSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKClsfdfvgtsidesseefgtvqipsawrpvledpstlqIFFDYyaiteaplSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQtgqgladhdnYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVtsvpylkgdapslldefvpkiTEGFITsrfnsvqagfpddlsdnpldNVELLQDQLdcfpylcrfqyensglyiINTMEPILQSYTERarmqtgdkseISVIEAKLAWIVHIIAAIVKIKqctgcslesQEVLDAELSARVLQLINVtdsglhsqrYCELSKQRLDRAILTFFQHFRksyvgdqamhSSKLYARLSELLGLHDHLLLLNVIVGKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANhtrehfpfleeyrcsrsrttfyYTIGWLIfmeespvkfkssmdPLLQVFISLestpdsmfrTDAVKCALIGLMRDLRGIAMATNSRRTYGLLFdwlypahmplllkgishwtdtpevttPLLKFMAEFVLNKAqrltfdssspngiLLFREVSKLIVAYGSrvlslpnaadiyaYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLesglkgldtniSSQCAAAVDNLAAFYfnnitmgeaptspaaINLARHivecptlfPEILKTLFEIVLFedcgnqwslsrpMLSLILISEQVFSDLKAqiltsqpvdqhqrLSVCFDKLMADVARSldsknrdkFTQNLTVFRHEFRVK

MESLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRDQSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFgtvqipsawrpvleDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQTGDKSEISVIEAKLAWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQLINvtdsglhsqRYCELSKQRLDRAILTFFQHFRKSYVGDQAMHSSKLYARLSELLGLHDHLLLLNVIVGKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHtrehfpfleeyrcsrsrTTFYYTIGWLIFMEESPVKFKSSMDPLLQVFISlestpdsmfRTDAVKCALIGLMRDLRGIAMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQrltfdssspnGILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQCAAAVDNLAAFYFNNITMGEAPTSPAAINLARHIVECPTLFPEILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQVFSDLKAQILTSQPVDQHQRLSVCFDKLMADVArsldsknrdkftqnltvfrhefrvk

MESLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRDQSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPSAWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQTGDKSEISVIEAKLAWivhiiaaivkikQCTGCSLESQEVLDAELSARVLQLINVTDSGLHSQRYCELSKQRLDRAILTFFQHFRKSYVGDQAMHSSKLYARlsellglhdhllllNVIVGKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFLEEYRCSRSRTTFYYTIGWLIFMEESPVKFKSSMDPLLQVFISLESTPDSMFRTDAVKCALIGLMRDLRGIAMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQCAAAVDNLAAFYFNNITMGEAPTSPAAINLARHIVECPTLFPEILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQVFSDLKAQILTSQPVDQHQRLSVCFDKLMADVARSLDSKNRDKFTQNLTVFRHEFRVK

*********LCERLYN******RAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVS**************RRVACSFRDQSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPSAWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARM**GDKSEISVIEAKLAWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQLINVTDSGLHSQRYCELSKQRLDRAILTFFQHFRKSYVGDQAMHSSKLYARLSELLGLHDHLLLLNVIVGKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFLEEYRCSRSRTTFYYTIGWLIFMEESPVKFKSSMDPLLQVFISLESTPDSMFRTDAVKCALIGLMRDLRGIAMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQCAAAVDNLAAFYFNNITMGEAPTSPAAINLARHIVECPTLFPEILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQVFSDLKAQILTSQPVDQHQRLSVCFDKLMADVAR************NLTVF*******

MESLAQLEALCERLYNS******A**ENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRDQSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPSAWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSY**************SVIEAKLAWIVHIIAAIVKIKQC*********VLDAELSARVLQLINVTD**************RLDRAILTFFQHFRKSYVGDQAMHSSK**A****LLGLHDHLLLLNVIVGKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFLEEYRCSRSRTTFYYTIGWLIFMEESPVKFKSSMDPLLQVFISLES*******TDAVKCALIGLMRDLRGIAMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRVLS*P***DIYAYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQCAAAVDNLAAFYFNNI************NLARHIVECPTLFPEILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQVFSDLKAQILTSQPVDQHQRLSVCFDKLMADVARSLDSKNRDKFTQNLTVFRHEFRV*

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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MESxxxxxxxxxxxxxxxxxxxxxHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRDQSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPSAWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQTGDKSEISVIEAKLAWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQLINVTDSGLHSQRYCELSKQRLDRAILTFFQHFRKSYVGDQAMHSSKLYARLSELLGLHDHLLLLNVIVGKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFLEEYRCSRSRTTFYYTIGWLIFMEESPVKFKSSMDPLLQVFISLESTPDSMFRTDAVKCALIGLMRDLRGIAMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQCAAAVDNLAAFYFNNITMGEAPTSPAAINLARHIVECPTLFPEILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQVFSDLKAQILTSQPVDQHQRLSVCFDKLMADVARSLDSKNRDKFTQNLTVFRHEFRVK

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		1051	2.2.26 [Sep-21-2011]
Q5ZLT0		1087	Exportin-7 OS=Gallus gall	yes	no	0.980	0.947	0.444	0.0
Q9UIA9		1087	Exportin-7 OS=Homo sapien	yes	no	0.983	0.951	0.442	0.0
Q9EPK7		1087	Exportin-7 OS=Mus musculu	yes	no	0.986	0.954	0.443	0.0
Q704U0		1087	Exportin-7-A OS=Xenopus l	N/A	no	0.982	0.950	0.439	0.0
Q5R9G4		1087	Exportin-7 OS=Pongo abeli	yes	no	0.983	0.951	0.441	0.0
Q569Z2		1087	Exportin-7-B OS=Xenopus l	N/A	no	0.982	0.950	0.438	0.0
Q9H2T7		1088	Ran-binding protein 17 OS	no	no	0.982	0.949	0.417	0.0
Q99NF8		1088	Ran-binding protein 17 OS	no	no	0.985	0.952	0.419	0.0
Q9GQN0		1098	Ran-binding protein 16 OS	yes	no	0.976	0.934	0.394	0.0
Q54DN3		1007	Exportin-7 OS=Dictyosteli	yes	no	0.899	0.938	0.348	1e-163

>sp\|Q5ZLT0\|XPO7_CHICK Exportin-7 OS=Gallus gallus GN=XPO7 PE=2 SV=1	Back alignment and function desciption

 Score =  906 bits (2341), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 481/1081 (44%), Positives = 695/1081 (64%), Gaps = 51/1081 (4%)

Query: 1    MESLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLAS 60
            ++SLAQLE LC++LY + D+  R  AE  L  F+ + D +S+CQ +L+   + Y+ +LA+
Sbjct: 5    VQSLAQLENLCKQLYETTDTATRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQLLAA 64

Query: 61   SSLLKQV--TEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDD 118
            + L K V  T + L L+ R+DIRNY++NYLA R P+L +FVT +LIQL  R+TK GWFD 
Sbjct: 65   TCLTKLVSRTNNPLPLEQRIDIRNYVLNYLATR-PKLATFVTQALIQLYARITKLGWFDC 123

Query: 119  DR----FRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFR 174
             +    FR+++ + T FL Q + +H  IG+ IL+QL +E+NQ +   P T HR++A SFR
Sbjct: 124  QKDEYVFRNVITDVTRFL-QDSVEHCIIGVTILSQLTNEINQADTTHPLTKHRKIASSFR 182

Query: 175  DQSLFQIFQISLTSLGQ-------LKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEE 227
            D SLF IF +S   L Q       L  +    L    L L   CL+FDF+GTS DESS++
Sbjct: 183  DSSLFDIFTLSCNLLKQASGKNLNLNDESQHGLLMQLLKLTHNCLNFDFIGTSTDESSDD 242

Query: 228  FGTVQIPSAWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARS 287
              TVQIP++WR    D STLQ+FFD Y       S   L CLV++ASVRRSLF N+A R+
Sbjct: 243  LCTVQIPTSWRSAFLDSSTLQLFFDLYHSIPPSFSPLVLSCLVQIASVRRSLF-NNAERA 301

Query: 288  KFLAHLMTGTKEILQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAE 347
            KFL+HL+ G K IL+  Q L+D +NYHE+CRLL R + NYQL ELV VE Y + I+L+A 
Sbjct: 302  KFLSHLVDGVKRILENPQSLSDPNNYHEFCRLLARLKSNYQLGELVKVENYPEVIRLIAN 361

Query: 348  FTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSV 407
            FT+ SLQ W++A +SV+YLL LW RL  SVPY+K   P +L+ + P++T+ +ITSR  SV
Sbjct: 362  FTVTSLQHWEFAPNSVHYLLSLWQRLAASVPYVKATEPHMLETYTPEVTKAYITSRLESV 421

Query: 408  QAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQT 467
                 D L D PLD+  L+Q QLD    + R +YE +   ++   +   QSY E  +  T
Sbjct: 422  HIILRDGLED-PLDDTGLVQQQLDQLSTIGRCEYEKTCALLVQLFDQSAQSYQELLQSAT 480

Query: 468  GDKSEISVIEAKLAWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQLINVTDSGLH 527
                +++V E +L W+V+II A++   + +  S + Q+ +D EL  RVLQL+N+TDS   
Sbjct: 481  ASPMDVAVQEGRLTWLVYIIGAVIG-GRVSFASTDEQDAMDGELVCRVLQLMNLTDS--- 536

Query: 528  SQRYCELSKQRLDRAILTFFQHFRKSYVGDQAMHSSKLYARLSELLGLHDHLLLLNVIVG 587
              R  +   ++L+ A+L+FF+ FRK Y+GDQ   SSKLY RLSE+LGL+D  ++L+V +G
Sbjct: 537  --RLAQAGNEKLELAMLSFFEQFRKIYIGDQVQKSSKLYRRLSEVLGLNDETMVLSVFIG 594

Query: 588  KIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPF---- 643
            KI TNLK +   + +   TL L  +L+ GY + + L+KL  ++F++ NHT EHF F    
Sbjct: 595  KIITNLKYWGRCEPITSKTLQLLNDLSIGYSSVRKLVKLSAVQFMLNNHTSEHFSFLGIN 654

Query: 644  ----LEEYRCSRSRTTFYYTIGWLIFME--ESPVKFKSSMDPLLQVFISLESTPDSMFRT 697
                L + RC   RTTFY  +G L+ ++  E   +++  M PL   F     T   MF T
Sbjct: 655  NQSNLTDMRC---RTTFYTALGRLLMVDLGEDEDQYEQFMLPLTAAF----ETVAQMFST 707

Query: 698  DA-----VKCALIGLMRDLRGIAMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEV 752
            +       K  L+GL+RDLRGIA A N++ ++ +LF+W+YP++MP+L + I  W   P  
Sbjct: 708  NTFNEQEAKRTLVGLVRDLRGIAFAFNAKTSFMMLFEWIYPSYMPILQRAIELWYHDPAC 767

Query: 753  TTPLLKFMAEFVLNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRVLSLPNAA--DIYAY 810
            TTP+LK MAE V N++QRL FD SSPNGILLFRE SK+I  YG+R+L+L       +YA 
Sbjct: 768  TTPVLKLMAELVHNRSQRLQFDVSSPNGILLFRETSKMITTYGNRILTLGEVPKDQVYAL 827

Query: 811  KYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLT 870
            K KG+ ICF++L  AL+G+YVNFGVF LYGD AL +AL   +K+ LSIP +D+L + KL+
Sbjct: 828  KLKGISICFSMLKAALSGSYVNFGVFRLYGDDALDNALQTFIKLLLSIPHSDLLDYPKLS 887

Query: 871  KAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQCAAAVDNLAAFYF 930
            ++Y++ LEVL   H+ FI +L  +  M+I+ S+  GL  LDT + + C + +D++  + F
Sbjct: 888  QSYYSLLEVLTQDHMNFIASLEPHVIMYILSSISEGLTALDTMVCTGCCSCLDHIVTYLF 947

Query: 931  NNITMG-EAPTSPAAINLAR--HIV-ECPTLFPEILKTLFEIVLFEDCGNQWSLSRPMLS 986
              ++   +  T+P      R  HI+ + P +  ++L T+  I++FEDC NQWS+SRP+L 
Sbjct: 948  KQLSRSTKKRTTPLTQESDRFLHIMQQHPEMIQQMLSTVLNIIIFEDCRNQWSMSRPLLG 1007

Query: 987  LILISEQVFSDLKAQILTSQPVDQHQRLSVCFDKLMADVARSLDSKNRDKFTQNLTVFRH 1046
            LIL++E+ FSDL+  I+ SQP ++ Q + +CF+ LM  + R+L +KNRD+FTQNL+ FR 
Sbjct: 1008 LILLNEKYFSDLRNSIVNSQPPEKQQAMHLCFENLMEGIERNLLTKNRDRFTQNLSAFRR 1067

Query: 1047 E 1047
            E
Sbjct: 1068 E 1068

Mediates the nuclear export of proteins (cargos) with broad substrate specificity.
Gallus gallus (taxid: 9031)

>sp\|Q9UIA9\|XPO7_HUMAN Exportin-7 OS=Homo sapiens GN=XPO7 PE=1 SV=3	Back alignment and function description

>sp\|Q9EPK7\|XPO7_MOUSE Exportin-7 OS=Mus musculus GN=Xpo7 PE=2 SV=3	Back alignment and function description

>sp\|Q704U0\|XPO7A_XENLA Exportin-7-A OS=Xenopus laevis GN=xpo7-a PE=1 SV=1	Back alignment and function description

>sp\|Q5R9G4\|XPO7_PONAB Exportin-7 OS=Pongo abelii GN=XPO7 PE=2 SV=3	Back alignment and function description

>sp\|Q569Z2\|XPO7B_XENLA Exportin-7-B OS=Xenopus laevis GN=xpo7-b PE=2 SV=1	Back alignment and function description

>sp\|Q9H2T7\|RBP17_HUMAN Ran-binding protein 17 OS=Homo sapiens GN=RANBP17 PE=2 SV=1	Back alignment and function description

>sp\|Q99NF8\|RBP17_MOUSE Ran-binding protein 17 OS=Mus musculus GN=Ranbp17 PE=2 SV=1	Back alignment and function description

>sp\|Q9GQN0\|RBP16_DROME Ran-binding protein 16 OS=Drosophila melanogaster GN=Ranbp16 PE=2 SV=1	Back alignment and function description

>sp\|Q54DN3\|XPO7_DICDI Exportin-7 OS=Dictyostelium discoideum GN=xpo7 PE=3 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1051
255569209		1089	Exportin-7, putative [Ricinus communis]	1.0	0.965	0.919	0.0
359494939		1052	PREDICTED: exportin-7-like [Vitis vinife	1.0	0.999	0.925	0.0
449458075		1061	PREDICTED: LOW QUALITY PROTEIN: exportin	1.0	0.990	0.908	0.0
224057198		1049	predicted protein [Populus trichocarpa]	0.997	0.999	0.910	0.0
224073084		1049	predicted protein [Populus trichocarpa]	0.997	0.999	0.902	0.0
356507720		1051	PREDICTED: exportin-7-A-like [Glycine ma	0.997	0.997	0.885	0.0
356517848		1053	PREDICTED: exportin-7-A-like [Glycine ma	0.997	0.995	0.883	0.0
334187450		1059	armadillo/beta-catenin-like repeat-conta	1.0	0.992	0.843	0.0
297806631		1051	hypothetical protein ARALYDRAFT_487414 [	1.0	1.0	0.844	0.0
30681279		1066	armadillo/beta-catenin-like repeat-conta	1.0	0.985	0.838	0.0

>gi\|255569209\|ref\|XP_002525573.1\| Exportin-7, putative [Ricinus communis] gi\|223535152\|gb\|EEF36832.1\| Exportin-7, putative [Ricinus communis]	Back alignment and taxonomy information

 Score = 2011 bits (5210), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 967/1052 (91%), Positives = 1013/1052 (96%), Gaps = 1/1052 (0%)

Query: 1    MESLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLAS 60
            MESLAQLEALCERLYNSQDS ERAHAENTLKCFS+NTDYISQCQ+ILDNALTPYALMLAS
Sbjct: 1    MESLAQLEALCERLYNSQDSAERAHAENTLKCFSMNTDYISQCQYILDNALTPYALMLAS 60

Query: 61   SSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDDR 120
            SSLLKQVTEHSL+ QLRLDI+NYLINYLA RGPELQ FV ASLIQLLCR+TKFGWFDDDR
Sbjct: 61   SSLLKQVTEHSLSTQLRLDIQNYLINYLATRGPELQPFVIASLIQLLCRVTKFGWFDDDR 120

Query: 121  FRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRDQSLFQ 180
            FRD+VKESTNFL QATS+HYAIGLKILNQLVSEMNQPN GLP+T+HRRVACSFRDQSLFQ
Sbjct: 121  FRDVVKESTNFLGQATSNHYAIGLKILNQLVSEMNQPNTGLPATNHRRVACSFRDQSLFQ 180

Query: 181  IFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPSAWRPV 240
            IFQISLTSL QLK+DV+SRLQELALSL LKCLSFDFVGTSIDESSEEFGTVQIPS+WRPV
Sbjct: 181  IFQISLTSLHQLKNDVSSRLQELALSLSLKCLSFDFVGTSIDESSEEFGTVQIPSSWRPV 240

Query: 241  LEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEI 300
            LEDPSTLQIFFDYYAIT APLSKEALECLVRLASVRRSLFTND  RSKFLAHLMTGTKEI
Sbjct: 241  LEDPSTLQIFFDYYAITTAPLSKEALECLVRLASVRRSLFTNDTTRSKFLAHLMTGTKEI 300

Query: 301  LQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWAS 360
            LQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGY DWIQLVAEFTL SLQSWQWAS
Sbjct: 301  LQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYGDWIQLVAEFTLTSLQSWQWAS 360

Query: 361  SSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPL 420
            SSVYYLLGLWS+LVTSVPYLKGDAPS+LDEFVPKITEGFITSRFNSVQAGFPDDLSDNPL
Sbjct: 361  SSVYYLLGLWSKLVTSVPYLKGDAPSMLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPL 420

Query: 421  DNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQTGDKSEISVIEAKL 480
            DNVELLQDQLDCFPYLCRFQYE+SG YIIN MEPILQ+YTERAR+QT D +E++VIEAKL
Sbjct: 421  DNVELLQDQLDCFPYLCRFQYESSGFYIINIMEPILQAYTERARVQTTDGNELAVIEAKL 480

Query: 481  AWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQLINVTDSGLHSQRYCELSKQRLD 540
            AWIVHIIAAI+KIKQ TGCS ESQE+LDAELSARVLQLINV DSGLHSQRY +LSKQRLD
Sbjct: 481  AWIVHIIAAILKIKQSTGCSAESQEMLDAELSARVLQLINVMDSGLHSQRYGQLSKQRLD 540

Query: 541  RAILTFFQHFRKSYVGDQAMHSSK-LYARLSELLGLHDHLLLLNVIVGKIATNLKCYTES 599
            RAILTFFQHFRKSYVGDQA+HSSK LYARLSELLGLHDHL+LLNVIVGKIATNLKCYTES
Sbjct: 541  RAILTFFQHFRKSYVGDQAVHSSKQLYARLSELLGLHDHLVLLNVIVGKIATNLKCYTES 600

Query: 600  QEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFLEEYRCSRSRTTFYYT 659
            +EVIDHTL+LFLELASGYMTGKLLLKLD IKFIVANHTREHFPFLEEYRCSRSRT FYYT
Sbjct: 601  EEVIDHTLNLFLELASGYMTGKLLLKLDAIKFIVANHTREHFPFLEEYRCSRSRTIFYYT 660

Query: 660  IGWLIFMEESPVKFKSSMDPLLQVFISLESTPDSMFRTDAVKCALIGLMRDLRGIAMATN 719
            IGWLIFME+SPVKFKSSM+PLLQVFISLESTPD+MFR+DAVK ALIGLMRDLRGIAMATN
Sbjct: 661  IGWLIFMEDSPVKFKSSMEPLLQVFISLESTPDAMFRSDAVKFALIGLMRDLRGIAMATN 720

Query: 720  SRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPN 779
               TYGLLFDWLYPAH+PLLLKGISHW DTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPN
Sbjct: 721  RHVTYGLLFDWLYPAHLPLLLKGISHWADTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPN 780

Query: 780  GILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWICFTILARALAGNYVNFGVFELY 839
            GILLFREVSKLIVAYG+R+L+LPNAADIYAYKYKG+WIC TIL+RALAGNYVNFGVFELY
Sbjct: 781  GILLFREVSKLIVAYGTRILTLPNAADIYAYKYKGIWICLTILSRALAGNYVNFGVFELY 840

Query: 840  GDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHI 899
            GDRAL+DALDIALK+TLSIPLADILAFRKLT+AYFAFLEVLFSSHI FILNL TNTFMHI
Sbjct: 841  GDRALADALDIALKLTLSIPLADILAFRKLTRAYFAFLEVLFSSHIIFILNLETNTFMHI 900

Query: 900  VGSLESGLKGLDTNISSQCAAAVDNLAAFYFNNITMGEAPTSPAAINLARHIVECPTLFP 959
            VGSLESGLKGLDTNISSQCA+AVDNLAAFYFNNITMGEAPT PAA+ LARHI +CP LFP
Sbjct: 901  VGSLESGLKGLDTNISSQCASAVDNLAAFYFNNITMGEAPTLPAAVKLARHIADCPNLFP 960

Query: 960  EILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQVFSDLKAQILTSQPVDQHQRLSVCFD 1019
            EILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQ+FSDLKAQIL SQPVDQHQRLS+CFD
Sbjct: 961  EILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQIFSDLKAQILVSQPVDQHQRLSLCFD 1020

Query: 1020 KLMADVARSLDSKNRDKFTQNLTVFRHEFRVK 1051
            KLMADV RSLDSKNRD+FTQNLTVFRHEFRVK
Sbjct: 1021 KLMADVTRSLDSKNRDRFTQNLTVFRHEFRVK 1052

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|359494939\|ref\|XP_003634876.1\| PREDICTED: exportin-7-like [Vitis vinifera] gi\|298205126\|emb\|CBI40647.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|449458075\|ref\|XP_004146773.1\| PREDICTED: LOW QUALITY PROTEIN: exportin-7-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|224057198\|ref\|XP_002299168.1\| predicted protein [Populus trichocarpa] gi\|222846426\|gb\|EEE83973.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|224073084\|ref\|XP_002303964.1\| predicted protein [Populus trichocarpa] gi\|222841396\|gb\|EEE78943.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356507720\|ref\|XP_003522612.1\| PREDICTED: exportin-7-A-like [Glycine max]	Back alignment and taxonomy information

>gi\|356517848\|ref\|XP_003527598.1\| PREDICTED: exportin-7-A-like [Glycine max]	Back alignment and taxonomy information

>gi\|334187450\|ref\|NP_001190235.1\| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] gi\|332003587\|gb\|AED90970.1\| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|297806631\|ref\|XP_002871199.1\| hypothetical protein ARALYDRAFT_487414 [Arabidopsis lyrata subsp. lyrata] gi\|297317036\|gb\|EFH47458.1\| hypothetical protein ARALYDRAFT_487414 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|30681279\|ref\|NP_196230.2\| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] gi\|332003586\|gb\|AED90969.1\| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1051
TAIR\|locus:2152840		1066	AT5G06120 "AT5G06120" [Arabido	1.0	0.985	0.816	0.0
UNIPROTKB\|E9PEN8		1096	XPO7 "Exportin-7" [Homo sapien	0.876	0.840	0.426	2.7e-237
UNIPROTKB\|Q5ZLT0		1087	XPO7 "Exportin-7" [Gallus gall	0.985	0.953	0.434	3.3e-230
ZFIN\|ZDB-GENE-060628-2		1090	xpo7 "exportin 7" [Danio rerio	0.985	0.950	0.435	1.4e-229
UNIPROTKB\|A1A4I8		1087	XPO7 "Uncharacterized protein"	0.985	0.953	0.434	6.1e-229
MGI\|MGI:1929705		1087	Xpo7 "exportin 7" [Mus musculu	0.985	0.953	0.433	7.8e-229
UNIPROTKB\|Q9UIA9		1087	XPO7 "Exportin-7" [Homo sapien	0.985	0.953	0.434	9.9e-229
UNIPROTKB\|E2RH14		1087	XPO7 "Uncharacterized protein"	0.984	0.952	0.434	1.3e-228
UNIPROTKB\|E7ESC6		1088	XPO7 "Exportin-7" [Homo sapien	0.984	0.951	0.434	1.6e-228
UNIPROTKB\|F1LQM9		1089	F1LQM9 "Uncharacterized protei	0.985	0.951	0.432	4.3e-228

TAIR\|locus:2152840 AT5G06120 "AT5G06120" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 4540 (1603.2 bits), Expect = 0., P = 0.
 Identities = 864/1058 (81%), Positives = 959/1058 (90%)

Query:     1 MESLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLAS 60
             MESLAQLEA+CERLYNSQDS ERAHAEN+L+CFSVNTDYISQCQ+ILDN+  PY+LMLAS
Sbjct:     9 MESLAQLEAMCERLYNSQDSAERAHAENSLRCFSVNTDYISQCQYILDNSSKPYSLMLAS 68

Query:    61 SSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDDR 120
             SSLLKQVT+H+L L LRLDIR Y++NYLA RGP++QSFV ASLIQLLCRLTKFGW DDDR
Sbjct:    69 SSLLKQVTDHTLPLNLRLDIRAYIVNYLATRGPKMQSFVIASLIQLLCRLTKFGWLDDDR 128

Query:   121 FRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRDQSLFQ 180
             FRD+VKESTNFL Q +SDHYAIGL+IL+QLV EMNQPNPGLPSTHHRRVAC+FRDQSLFQ
Sbjct:   129 FRDVVKESTNFLEQGSSDHYAIGLRILDQLVQEMNQPNPGLPSTHHRRVACNFRDQSLFQ 188

Query:   181 IFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPSAWRPV 240
             +F+I+LTSL  LK+D A RLQELALSL L+C+SFDFVGTSIDES+EEFGTVQIP++WR V
Sbjct:   189 VFRIALTSLSYLKNDAAGRLQELALSLALRCVSFDFVGTSIDESTEEFGTVQIPTSWRSV 248

Query:   241 LEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEI 300
             LED STLQIFFDYY  TE+PLSKEALECLVRLASVRRSLFTNDA RS FLAHLMTGTKEI
Sbjct:   249 LEDSSTLQIFFDYYGSTESPLSKEALECLVRLASVRRSLFTNDATRSNFLAHLMTGTKEI 308

Query:   301 LQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWAS 360
             LQTG+GLADHDNYH +CRLLGRFR+NYQLSELV +EGY +WIQLVAEFTLKSLQSWQWAS
Sbjct:   309 LQTGKGLADHDNYHVFCRLLGRFRLNYQLSELVKMEGYGEWIQLVAEFTLKSLQSWQWAS 368

Query:   361 SSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPL 420
             SSVYYLLG+WSRLV SVPYLKGD+PSLLDEFVPKITEGFI SRFNSVQA  PDD +D+PL
Sbjct:   369 SSVYYLLGMWSRLVASVPYLKGDSPSLLDEFVPKITEGFIISRFNSVQASVPDDPTDHPL 428

Query:   421 DNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQTGDKSEISVIEAKL 480
             D VE+LQD+LDCFPYLCRFQYE +G+YIINTMEP+LQSYTER ++Q  D SE+++IEAKL
Sbjct:   429 DKVEVLQDELDCFPYLCRFQYERTGMYIINTMEPLLQSYTERGQLQFADNSELALIEAKL 488

Query:   481 AWXXXXXXXXXXXXQCTGCSLESQEVLDAELSARVLQLINVTDSGLHSQRYCELSKQRLD 540
             +W            QC+GCS+E+QEVLDAELSARVL+L+NV DSGLH QRY E+SKQRLD
Sbjct:   489 SWIVHIVAAIVKIKQCSGCSVETQEVLDAELSARVLRLVNVMDSGLHRQRYGEISKQRLD 548

Query:   541 RAILTFFQHFRKSYVGDQAMHSSKLYARXXXXXXXXXXXXXXNVIVGKIATNLKCYTESQ 600
             RAILTFFQ+FRKSYVGDQAMHSSKLYAR              NVIVGKIATNLKCYTES+
Sbjct:   549 RAILTFFQNFRKSYVGDQAMHSSKLYARLKELLGLHDHLVLLNVIVGKIATNLKCYTESE 608

Query:   601 EVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFLEEYRCSRSRTTFYYTI 660
             EVI+HTLSLFLELASGYMTGKLLLKLDT+ FI++NHTRE FPFLEEYRCSRSRTTFYYTI
Sbjct:   609 EVINHTLSLFLELASGYMTGKLLLKLDTVTFIISNHTREQFPFLEEYRCSRSRTTFYYTI 668

Query:   661 GWLIFMEESPVKFKSSMDPLLQVFISLESTPDSMFRTDAVKCALIGLMRDLRGIAMATNS 720
             GWLIFME+S +KFK+SM+PLLQVF +LESTPDSMFRTDAVK ALIGLMRDLRGIAMAT+S
Sbjct:   669 GWLIFMEDSLIKFKTSMEPLLQVFRTLESTPDSMFRTDAVKFALIGLMRDLRGIAMATSS 728

Query:   721 RRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPNG 780
             RR+YG LFDWLYPAHMPLLL+G+SHW DTPEVTTPLLKFMAEFV NK QRLTFDSSSPNG
Sbjct:   729 RRSYGFLFDWLYPAHMPLLLRGVSHWFDTPEVTTPLLKFMAEFVHNKTQRLTFDSSSPNG 788

Query:   781 ILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWICFTILARALAGNYVNFGVFELYG 840
             ILLFREVSKLIVAYGSR+L+LPN ADIYA+KYKG+W+  TIL+RAL+GNY NFGVFELYG
Sbjct:   789 ILLFREVSKLIVAYGSRILALPNVADIYAFKYKGIWVSLTILSRALSGNYCNFGVFELYG 848

Query:   841 DRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIV 900
             DRAL+DALDIALKMTL+IPLADILA+RKLTKAYF F+EVL +SHITFIL L+T TFMH+V
Sbjct:   849 DRALADALDIALKMTLAIPLADILAYRKLTKAYFGFVEVLCASHITFILKLDTATFMHLV 908

Query:   901 GSLESGLKGLDTNISSQCAAAVDNLAAFYFNNITMGEAPTSPAAINLARHIVECPTLFPE 960
             GSLESGLKGLDT+ISSQCA AVDNLA++YFNNITMGEAPT+PAAI  A+HI +CP+LFPE
Sbjct:   909 GSLESGLKGLDTSISSQCAIAVDNLASYYFNNITMGEAPTTPAAIRFAQHIADCPSLFPE 968

Query:   961 ILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQVFSDLKAQILTSQ-------PVDQHQR 1013
             ILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQ+FSDLKA+IL+SQ       P DQHQR
Sbjct:   969 ILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQIFSDLKAKILSSQSIILMVQPADQHQR 1028

Query:  1014 LSVCFDKLMADVARSLDSKNRDKFTQNLTVFRHEFRVK 1051
             LS CFD LM D++R LDSKNRDKFTQNLT+FRHEFRVK
Sbjct:  1029 LSACFDSLMTDISRGLDSKNRDKFTQNLTLFRHEFRVK 1066

GO:0000059 "protein import into nucleus, docking" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0005643 "nuclear pore" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0008565 "protein transporter activity" evidence=IEA;ISS

GO:0006486 "protein glycosylation" evidence=RCA

GO:0009630 "gravitropism" evidence=RCA

UNIPROTKB\|E9PEN8 XPO7 "Exportin-7" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5ZLT0 XPO7 "Exportin-7" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-060628-2 xpo7 "exportin 7" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|A1A4I8 XPO7 "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

MGI\|MGI:1929705 Xpo7 "exportin 7" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9UIA9 XPO7 "Exportin-7" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|E2RH14 XPO7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|E7ESC6 XPO7 "Exportin-7" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|F1LQM9 F1LQM9 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9GQN0	RBP16_DROME	No assigned EC number	0.3946	0.9762	0.9344	yes	no
Q9EPK7	XPO7_MOUSE	No assigned EC number	0.4432	0.9866	0.9540	yes	no
Q5ZLT0	XPO7_CHICK	No assigned EC number	0.4449	0.9800	0.9475	yes	no
Q54DN3	XPO7_DICDI	No assigned EC number	0.3482	0.8991	0.9384	yes	no
Q9UIA9	XPO7_HUMAN	No assigned EC number	0.4428	0.9838	0.9512	yes	no
Q5R9G4	XPO7_PONAB	No assigned EC number	0.4419	0.9838	0.9512	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1051
smart00913		67	smart00913, IBN_N, Importin-beta N-terminal domain	2e-05
pfam03810		71	pfam03810, IBN_N, Importin-beta N-terminal domain	9e-05

>gnl\|CDD\|197981 smart00913, IBN_N, Importin-beta N-terminal domain	Back alignment and domain information

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 26 AENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTEH--SLALQLRLDIRNY 83
          AE  L+ F  +  +      IL N+   Y   LA+ +L  ++T    SL  + + +I+N 
Sbjct: 1  AEKQLEQFQKSPGFWLLLLEILANSEDQYVRQLAAITLKNKITRRWSSLPEEEKEEIKNS 60

Query: 84 LINYLAK 90
          L+  L  
Sbjct: 61 LLELLLS 67

Members of the importin-beta (karyopherin-beta) family can bind and transport cargo by themselves, or can form heterodimers with importin-alpha. As part of a heterodimer, importin-beta mediates interactions with the pore complex, while importin-alpha acts as an adaptor protein to bind the nuclear localisation signal (NLS) on the cargo through the classical NLS import of proteins. Importin-beta is a helicoidal molecule constructed from 19 HEAT repeats. Many nuclear pore proteins contain FG sequence repeats that can bind to HEAT repeats within importins.. which is important for importin-beta mediated transport. Length = 67

>gnl\|CDD\|217743 pfam03810, IBN_N, Importin-beta N-terminal domain	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1051
KOG1410		1082	consensus Nuclear transport receptor RanBP16 (impo	100.0
COG5101		1053	CRM1 Importin beta-related nuclear transport recep	100.0
KOG4541		748	consensus Nuclear transport receptor exportin 4 (i	100.0
KOG2020		1041	consensus Nuclear transport receptor CRM1/MSN5 (im	100.0
KOG2022		982	consensus Nuclear transport receptor LGL2 (importi	99.88
KOG2021		980	consensus Nuclear mRNA export factor receptor LOS1	99.81
PF08767		319	CRM1_C: CRM1 C terminal; InterPro: IPR014877 CRM1	99.79
KOG2023		885	consensus Nuclear transport receptor Karyopherin-b	99.34
KOG2171		1075	consensus Karyopherin (importin) beta 3 [Nuclear s	99.31
PF08389		148	Xpo1: Exportin 1-like protein; InterPro: IPR013598	98.98
KOG1992		960	consensus Nuclear export receptor CSE1/CAS (import	98.84
KOG2081		559	consensus Nuclear transport regulator [Intracellul	98.81
KOG1991		1010	consensus Nuclear transport receptor RANBP7/RANBP8	98.75
PF03810		77	IBN_N: Importin-beta N-terminal domain; InterPro:	98.13
KOG1241		859	consensus Karyopherin (importin) beta 1 [Nuclear s	98.13
KOG1993		978	consensus Nuclear transport receptor KAP120 (impor	96.77
COG5657		947	CSE1 CAS/CSE protein involved in chromosome segreg	96.49
KOG2274		1005	consensus Predicted importin 9 [Intracellular traf	95.97
KOG4541		748	consensus Nuclear transport receptor exportin 4 (i	93.32
COG5656		970	SXM1 Importin, protein involved in nuclear import	89.44
COG5215		858	KAP95 Karyopherin (importin) beta [Intracellular t	80.43

>KOG1410 consensus Nuclear transport receptor RanBP16 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

Probab=100.00  E-value=2.5e-206  Score=1657.76  Aligned_cols=1041  Identities=50%  Similarity=0.844  Sum_probs=997.4

Q ss_pred             ChhHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhccCcccHHHHHHHHhcCCChhHHHHHHHHHHHHHhh-ccCCHHHHHH
Q 001571            1 MESLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTE-HSLALQLRLD   79 (1051)
Q Consensus         1 ~~~l~~lE~~~~~ly~~~~~~~r~~Ae~~L~~f~~~~~~~~~~~~iL~~S~~~~~~f~a~~~L~~~i~~-~~l~~~~r~~   79 (1051)
                      |+++++||.+|+.+|+++|+.+|.+||+.|.+|.++|+++.+|+.+|++++.||.++.|+++|.+.+.+ ..+|.++|.+
T Consensus         1 m~sLaqLe~lCk~LY~s~D~~~R~~AE~~L~e~s~speclskCqlll~~gs~pYs~mlAst~L~Klvs~~t~lpl~qrld   80 (1082)
T KOG1410|consen    1 MQSLAQLESLCKDLYESTDPTARHRAEKALAELSESPECLSKCQLLLERGSYPYSQMLASTCLMKLVSRKTPLPLEQRLD   80 (1082)
T ss_pred             CccHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHcCCCCCcHHHHHH
Confidence            789999999999999999999999999999999999999999999999999999999999999999999 8899999999


Q ss_pred             HHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHhhccCCCh----hhhhHHHHHHHHHhccCchhHHHHHHHHHHHHHhcc
Q 001571           80 IRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDD----RFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMN  155 (1051)
Q Consensus        80 lr~~ll~~l~~~~~~~~~~v~~~l~~~la~i~K~~w~~~~----~~~~~i~~i~~~l~~~~~~~~~~gl~lL~~lv~Ef~  155 (1051)
                      ||+|+++|+.+++|++++||...+++++|+++|.||+|..    ++|+.+.++.+|++.++.+|+++|+.||+.+++||+
T Consensus        81 ir~Yilnylat~~Pk~~~fvi~sLiQl~arlTK~gW~d~~k~~y~FRd~v~~~~kfl~~~~ve~~~igv~iLsqLvqemN  160 (1082)
T KOG1410|consen   81 IRNYILNYLATGAPKLAPFVIQSLIQLFARLTKLGWFDQQKDEYVFRDPVDDVTKFLQMDNVEHCIIGVQILSQLVQEMN  160 (1082)
T ss_pred             HHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHhccccccccccchhhhhHHHHHHHhccCchHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999999999999999999853    789999999999987789999999999999999999


Q ss_pred             CCCCCcchHHhHhhhhhcchhchHHHHHHHHHHHHhhh-----hhhHHHHHHHHHHHHhHhccccccccCCCCCcccccc
Q 001571          156 QPNPGLPSTHHRRVACSFRDQSLFQIFQISLTSLGQLK-----SDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGT  230 (1051)
Q Consensus       156 ~~~~~~~~~~hrk~~~~f~~~~L~~if~~~~~~L~~~~-----~~~~~~l~~~~L~l~~~~Lsw~f~~~~~de~~~d~~~  230 (1051)
                      +.+.+.+..+|||...+|||+.|.+||.+++.+|+...     ++.+..+..++|++..+||+|||+|++.||++||..+
T Consensus       161 ~~~~~~p~tkHRkias~FRD~sL~~vf~laln~L~~~~~~nlnd~~q~~L~~~vL~L~l~Cl~FDfiGss~DEssed~ct  240 (1082)
T KOG1410|consen  161 QADGMDPSTKHRKIASSFRDDSLFDVFSLALNLLKDNVDLNLNDRAQLGLLMQVLKLNLNCLNFDFIGSSTDESSEDLCT  240 (1082)
T ss_pred             CCCCCCcchHHHHHHhhhhhhHHHHHHHHHHHHHHHhcccCcccHhHhhHHHHHHHHHhhhccccccccccccccccccc
Confidence            99999999999999999999999999999999999875     2234679999999999999999999999999999999


Q ss_pred             ccCCCCccccccCccHHHHHHHHHhhcCCcchHHHHHHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHhhcCcCCCCc
Q 001571          231 VQIPSAWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQTGQGLADH  310 (1051)
Q Consensus       231 ~~~p~~W~~~l~~~~~l~llf~~y~~~~~~l~~~~l~cL~~l~sl~~~~f~~~~~~~~~l~~~l~~~~~il~~~~~l~~~  310 (1051)
                      ||+|.+||..+.|++++++||++|...+|+++..++.||+|+||+|+++|++ .+|.+|++++++|+..|+++++|++|+
T Consensus       241 VQIPTsWRs~f~d~stlqlfFdly~slp~~~S~~alsclvqlASvRRsLFN~-aeRa~yl~~Lv~Gvk~il~np~~LsD~  319 (1082)
T KOG1410|consen  241 VQIPTSWRSSFLDSSTLQLFFDLYHSLPPELSELALSCLVQLASVRRSLFNG-AERAKYLQHLVEGVKRILENPQGLSDP  319 (1082)
T ss_pred             eecCcHHHHHhcCchHHHHHHHHhccCCchhhHHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHhCCcCCCCc
Confidence            9999999999999999999999999899999999999999999999999966 899999999999999999999999999


Q ss_pred             hhHHHHHHHHhhhhhhcchhhhhcccChHHHHHHHHHHHHHhhhhhccccCcHHHHHHHHHHhhcCcCcccCCCcchhhh
Q 001571          311 DNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDE  390 (1051)
Q Consensus       311 ~~~~~~~~~l~rl~~~~~l~~l~~~~~~~~~l~~l~~ft~~~l~~~~~~~~s~~~lL~~W~~lv~~~~~~~~~~~~~l~~  390 (1051)
                      ++||+|||++.|+++||++.||+++++|++||+.+|.||+.+++.|.|+++|.+|||.+|.+||.++||++++.|+.++.
T Consensus       320 ~nyHeFCRllaRlktNYQL~ELv~v~~Y~e~irLiAeFTv~SLq~wefa~nSvyyLlt~WqRmvaSVPyvk~~~phlLd~  399 (1082)
T KOG1410|consen  320 ANYHEFCRLLARLKTNYQLGELVKVECYPEVIRLIAEFTVTSLQHWEFAPNSVYYLLTLWQRMVASVPYVKNTEPHLLDT  399 (1082)
T ss_pred             chHHHHHHHHHHHHhhhhhHhhhccCCcHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHhcCCcccCCChHHHhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHhhhccccccccCCCCCCCCCCcHHHHHHHHhhhhhhhccchhhHHHHHHHhHHHHHHHHHHHhhcCCCCc
Q 001571          391 FVPKITEGFITSRFNSVQAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQTGDK  470 (1051)
Q Consensus       391 ~~~~I~~~yi~~~l~~~~~~~~~e~~e~~~~d~~~~~~~le~i~~l~r~~~~~t~~~L~~~l~~~~~~~~~~~~~~~~~~  470 (1051)
                      |+|+|.++||.||++.++.++.|+ .|+|+||.+...+++|.+++++|+.|+.|+.+|.++|++..+.|++....+..++
T Consensus       400 y~PeIt~afi~SRl~sV~~ivrd~-~d~PLdd~~~~~q~le~l~~icRceYEkTc~llvq~fdq~aqsyqe~~~~~s~~~  478 (1082)
T KOG1410|consen  400 YCPEITKAFITSRLQSVEIIVRDG-LDDPLDDTGAVQQQLEQLATICRCEYEKTCALLVQLFDQNAQSYQELLQNGSAND  478 (1082)
T ss_pred             hcHHHHHHHHHHHhhhhheecccC-CCCcchhhHHHHHHHHHhhhhhhhhHhhHHHHHHHHHhhhHHHHHHHhcccCCCc
Confidence            999999999999999998777766 6899999999999999999999999999999999999999999998865544466


Q ss_pred             chhhhHHHHHHHHHHHHHHHhhcccccCCCcccccccchHHHHHHHHHhhhccccccccccccccHHHHHHHHHHHHHHh
Q 001571          471 SEISVIEAKLAWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQLINVTDSGLHSQRYCELSKQRLDRAILTFFQHF  550 (1051)
Q Consensus       471 ~~l~~~~e~L~Wli~i~g~~l~~~~~~~~~~~~~~~~d~~L~~~v~~l~~l~~~~~~~~~~~~~s~~~l~~a~l~fl~~~  550 (1051)
                      ..+.+.|++|.|+|+|+|++++|+ .+.+++++++++||+|+++|+++++++|...     +..+++|++.|++||+.+|
T Consensus       479 ~d~ai~EgrL~Wlv~lvgtvV~gk-~t~~Std~~d~mDgEL~arvlql~nlmdsr~-----~~~~n~rle~ail~f~eqF  552 (1082)
T KOG1410|consen  479 ADIAIQEGRLVWLVYLVGTVVGGK-TTATSTDEHDAMDGELSARVLQLVNLMDSRL-----PLKGNERLELAILHFLEQF  552 (1082)
T ss_pred             hhHHHHhhhhhhhHHHhHHHhcce-ecccccchhhhhhhHHHHHHHHHHHhhhccc-----chhhhHHHHHHHHHHHHHH
Confidence            677789999999999999999999 5556789999999999999999999998755     5566799999999999999


Q ss_pred             HHHHhccCCccchHHHHHHHHHhCCCChHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHhcccchhhHHhcchhHH
Q 001571          551 RKSYVGDQAMHSSKLYARLSELLGLHDHLLLLNVIVGKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIK  630 (1051)
Q Consensus       551 ~~~yl~~~~~~~~k~~~~l~~~~g~~d~~~~~~~~l~~i~~~L~~~~~~~~v~~~~~~Ll~~l~~~~~~~~~l~~~~~~~  630 (1051)
                      +++|+|++.++++|+|.+++|.+|+.|+..++++++.||.+||++|+..++|+..+++||.+++.|++.+|+++++|.|+
T Consensus       553 Rk~YvgDQ~~rsSkvY~rl~e~Lgi~de~~~L~viv~KI~TNLK~w~~~e~vi~~tLslf~dLs~GY~~~kkL~kl~~Vq  632 (1082)
T KOG1410|consen  553 RKAYVGDQIQRSSKVYARLSEVLGITDESDVLGVIVGKILTNLKYWGRNEPVISLTLSLFNDLSLGYSAVKKLVKLDAVQ  632 (1082)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhhcccccCCchHHHHHHHHHHHHhhhHHHHHHHhcchhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcccCCCCCcccc---cccchhHHHHHHHHHHHhcc--CChHHHHHhhHHHHHHHHHhh-cCCCcccccHHHHHHH
Q 001571          631 FIVANHTREHFPFLEEY---RCSRSRTTFYYTIGWLIFME--ESPVKFKSSMDPLLQVFISLE-STPDSMFRTDAVKCAL  704 (1051)
Q Consensus       631 ~l~~~~~~~~~~~l~~~---~~~~~r~~~y~al~~~~~~~--~~~~~~~~~l~p~~~~~~~l~-~~~~~~~~~~~~~~~l  704 (1051)
                      ++++||++++|||++..   ...|+||+||.|+|+++++|  +.+..|++||.|+++.|..+. .-+.+.|+.+++|..+
T Consensus       633 fmlnNHT~ehF~FLg~~~~~~~~r~RTTFY~al~rLl~~d~sede~~fe~fm~PLt~~fe~v~~~~~nn~f~ee~vK~~l  712 (1082)
T KOG1410|consen  633 FMLNNHTSEHFPFLGINIDLQDMRCRTTFYTALTRLLMVDLSEDEDMFERFMLPLTDAFEGVLQVFQNNCFEEEQVKRIL  712 (1082)
T ss_pred             hHhcccchhhCcccccCccchhhhhHhHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHH
Confidence            99999999999999866   66899999999999999887  447799999999999999774 2222569999999999


Q ss_pred             HHHHHHHhhHHhhhccchhHHHHHHHHhhcchHHHHHHhhhhcCCCchHHHHHHHHHHHHhccccceeccCCCcchhhhH
Q 001571          705 IGLMRDLRGIAMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPNGILLF  784 (1051)
Q Consensus       705 ~~ll~~l~Gi~~a~~~~~~~~~lf~~i~p~~~~~~~~l~~~y~~~~~v~~~iLkl~~e~~~n~~~ri~f~~~s~~~~~lf  784 (1051)
                      +|++||+|||+.|.+++.+|.++|+|+||.++|++...++.|.++|++++|||||++|+++||+||+.|+.+||||++||
T Consensus       713 iGL~RDLRGiA~A~~tktsy~~LFdWmYP~~mpllq~~Ve~W~~~p~vtTPiLklmaE~v~NrsQRL~Fd~SSpngiLLF  792 (1082)
T KOG1410|consen  713 IGLCRDLRGIAFASNTKTSYQMLFDWMYPEYMPLLQRAVEKWYGCPDVTTPILKLMAELVQNRSQRLKFDVSSPNGILLF  792 (1082)
T ss_pred             HHHHHHhhhhhhhhccchHHHHHHHHhhhhHHHHHHHHHHhcCCCCccccHHHHHHHHHHhhhHhheecccCCCceeEEe
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcCCC--CchhhHhhhhhhHHHHHHHHHHhhcCCccccccccccCCCcHHHHHHHHHHhhhccChhh
Q 001571          785 REVSKLIVAYGSRVLSLP--NAADIYAYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLAD  862 (1051)
Q Consensus       785 ~~~~~~~~~y~~~~~~~~--~~~~~~~~~~k~l~~~l~il~~~l~~~~vnfg~~~~y~D~~~~~~l~~~l~~~l~ip~~d  862 (1051)
                      |+++|++..||.+++++|  ++...|+++||+|.+|+.+|.++++|+|||||||++|||+++.+++..+++|+++||..|
T Consensus       793 rEtSKmv~~YG~riL~Lp~vskdqiY~~kyKgI~v~~siLk~AL~GnYv~FGVFrLYGD~~l~daL~~fvKm~lsIp~sD  872 (1082)
T KOG1410|consen  793 RETSKMVSIYGNRILQLPEVSKDQIYAEKYKGISVCFSILKNALSGNYVNFGVFRLYGDSALDDALQTFVKMLLSIPHSD  872 (1082)
T ss_pred             hhhhHHHHHHhhHhhcccCcchhhhHHHHhcCceehHHHHHHHhhcCccccceeeeeCchHHHHHHHHHHHHHhcCCHHH
Confidence            999999999999999998  455689999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhHhhHHHHHHHHHHHHhhhHHhhhcCCHHHHHHHHHHHHHhhcCCChHHHhHHHHHHHHHHHHHHHhhccCCCC---
Q 001571          863 ILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQCAAAVDNLAAFYFNNITMGEAP---  939 (1051)
Q Consensus       863 l~~yPkl~~~~f~ll~~~~~~~~~~l~~l~~~~f~~l~~~l~~gl~~~~~~i~~~~~~~l~~l~~~~~~~~~~~~~~---  939 (1051)
                      +++|||+.++||.|+|.+++.|+.++.+|+++.|..++.||..|+++.|+.|++.||.++|++++|+|+++.++..|   
T Consensus       873 ~l~Y~Klsqsyy~llE~l~qdhm~Fi~nL~~~vfm~ll~Si~sGLt~lDt~v~ssccsslD~i~tYlfk~itr~~~p~~~  952 (1082)
T KOG1410|consen  873 LLSYRKLSQSYYNLLEVLTQDHMPFITNLEPDVFMYLLRSISSGLTSLDTIVSSSCCSSLDTIVTYLFKRITRSTKPTRK  952 (1082)
T ss_pred             HHhHHHHHHHHhhHHHHHHhccchhhhcCcHHHHHHHHHHHHhccchhhHHHHhHHHHHHHHHHHHHHHHHhccCCCcCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999877665   


Q ss_pred             --CChHHHHHHHHHhhCCCcHHHHHHHHHHHHhccCCCchhhchhhhHHHHhcCHHHHHHHHHHHHhcCChhhHHHHHHH
Q 001571          940 --TSPAAINLARHIVECPTLFPEILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQVFSDLKAQILTSQPVDQHQRLSVC 1017 (1051)
Q Consensus       940 --~~~~~~~l~~~~~~~~~~~~~~l~~~~~~ll~~~~~~~~~~s~~L~~li~~~~~~f~~l~~~li~~q~~~~~~~l~~a 1017 (1051)
                        .+|.++.+..++++||+++++||+.++++++|+||++||++||||++||++++++|..++.+|+++||+++|+++..|
T Consensus       953 ~~~tpa~~r~l~~i~q~Pdil~qml~tl~~ii~Fedc~nQWSlSRPlLgLILi~E~~fSdlk~~l~ssQp~dkqq~l~~c 1032 (1082)
T KOG1410|consen  953 VGMTPAGDRFLHAIQQHPDILQQMLSTLINIIMFEDCRNQWSLSRPLLGLILINEKYFSDLKASLTSSQPYDKQQDLDMC 1032 (1082)
T ss_pred             CCCChhHHHHHHHHHhChHHHHHHHHHHHHHHhHHhhcccccccchhhHHHhhhHHHHHHHHHHHhcCCCcchhHHHHHH
Confidence              458999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhcccChhhHHHHHHHHHHHHHHhh
Q 001571         1018 FDKLMADVARSLDSKNRDKFTQNLTVFRHEFR 1049 (1051)
Q Consensus      1018 f~~L~~~i~~~l~~~nr~~F~~nl~~F~~~vr 1049 (1051)
                      |.+||+||+.+++.||||+||+|+..||++|+
T Consensus      1033 F~~LM~~ve~nL~~KNrD~FTQNLt~FRrdv~ 1064 (1082)
T KOG1410|consen 1033 FTNLMEGVERNLTVKNRDRFTQNLTRFRRDVA 1064 (1082)
T ss_pred             HHHHHHHHhhcccccchhHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999997

>COG5101 CRM1 Importin beta-related nuclear transport receptor [Nuclear structure / Intracellular trafficking and secretion]	Back alignment and domain information

>KOG4541 consensus Nuclear transport receptor exportin 4 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG2020 consensus Nuclear transport receptor CRM1/MSN5 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG2022 consensus Nuclear transport receptor LGL2 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG2021 consensus Nuclear mRNA export factor receptor LOS1/Exportin-t (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport; Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PF08767 CRM1_C: CRM1 C terminal; InterPro: IPR014877 CRM1 (also known as Exportin1) mediates the nuclear export of proteins bearing a leucine-rich nuclear export signal (NES)	Back alignment and domain information

>KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF08389 Xpo1: Exportin 1-like protein; InterPro: IPR013598 The exchange of macromolecules between the nucleus and cytoplasm takes place through nuclear pore complexes within the nuclear membrane	Back alignment and domain information

>KOG1992 consensus Nuclear export receptor CSE1/CAS (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG2081 consensus Nuclear transport regulator [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG1991 consensus Nuclear transport receptor RANBP7/RANBP8 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF03810 IBN_N: Importin-beta N-terminal domain; InterPro: IPR001494 Karyopherins are a group of proteins involved in transporting molecules through the pores of the nuclear envelope	Back alignment and domain information

>KOG1241 consensus Karyopherin (importin) beta 1 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG1993 consensus Nuclear transport receptor KAP120 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>COG5657 CSE1 CAS/CSE protein involved in chromosome segregation [Cell division and chromosome partitioning]	Back alignment and domain information

>KOG2274 consensus Predicted importin 9 [Intracellular trafficking, secretion, and vesicular transport; Nuclear structure]	Back alignment and domain information

>KOG4541 consensus Nuclear transport receptor exportin 4 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>COG5656 SXM1 Importin, protein involved in nuclear import [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>COG5215 KAP95 Karyopherin (importin) beta [Intracellular trafficking and secretion]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		1051
3m1i_C		1049	Exportin-1; heat repeat, GTP-binding, nucleotide-b	3e-27
3a6p_A		1204	Exportin-5; exportin-5, RANGTP, nuclearexport, imp	7e-17
3gjx_A		1073	Exportin-1; transport, cytoplasm, nucleus, RNA-bin	7e-15
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-13
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-11
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-09
2x19_B		963	Importin-13; nuclear transport, protein transport;	8e-13
3ibv_A		980	Exportin-T; karyopherin, heat repeat, cytoplasm, n	1e-07

>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B Length = 1049	Back alignment and structure

 Score =  118 bits (297), Expect = 3e-27
 Identities = 130/1075 (12%), Positives = 316/1075 (29%), Gaps = 127/1075 (11%)

Query: 3    SLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSS 62
             +A L+ +    Y      ++  A+  L  F  N D   +   IL  +  P +  +A S 
Sbjct: 14   DIALLDQVVSTFYQGSGV-QQKQAQEILTKFQDNPDAWQKADQILQFSTNPQSKFIALSI 72

Query: 63   LLKQVTEH--SLALQLRLDIRNYLINYLAKRGPELQSFVTASLI-----QLLCRLTKFGW 115
            L K +T     L    R+ IRN+++  +     + + F T   +       L ++ K  W
Sbjct: 73   LDKLITRKWKLLPNDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKSDLTLVQILKQEW 132

Query: 116  FDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRD 175
                 + + + E     S  + +     + +L  L  E+   +    +        +   
Sbjct: 133  --PQNWPEFIPELIGSSSS-SVNVCENNMIVLKLLSEEVFDFSAEQMTQAKALHLKNSMS 189

Query: 176  QSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPS 235
            +   QIF++       L+   +S L    L   L+ L +                     
Sbjct: 190  KEFEQIFKLCFQ---VLEQGSSSSLIVATLESLLRYLHWIPYR----------------- 229

Query: 236  AWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMT 295
                 + + + L++    + +T        L+CL  +++++     ND  + + +     
Sbjct: 230  ----YIYETNILELLSTKF-MTSPDTRAITLKCLTEVSNLKIPQD-NDLIKRQTVLFFQN 283

Query: 296  GTKEILQ---------TGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVA 346
              ++I                  + N   + + L  F   Y       +E      +L+ 
Sbjct: 284  TLQQIATSVMPVTADLKATYANANGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLL 343

Query: 347  EFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNS 406
                  +Q  +     ++     +   + +  + +     + +E   ++    I +    
Sbjct: 344  NAHQYLIQLSKIEERELFKTTLDYWHNLVADLFYEPLKKHIYEEICSQLRLVIIENMV-- 401

Query: 407  VQAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQ 466
                 P+++     D  E++++ +     +  ++ E   L  +  +  I       +++ 
Sbjct: 402  ----RPEEVLVVENDEGEIVREFVKESDTIQLYKSEREVLVYLTHLNVIDTEEIMISKLA 457

Query: 467  TGDKSEISVIEAKLAWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQLINVTDSGL 526
                                I +I         S ++++     +   +L L        
Sbjct: 458  RQIDGSEWSWHNINTLS-WAIGSISG-----TMSEDTEKRFVVTVIKDLLDLT------- 504

Query: 527  HSQRYCELSKQRLDRAILTFFQHFRKSYVGDQAMHSSKLYARLSELLGLHDHLLLLNVIV 586
              ++  + +K  +   I+     + +                      L  H   L  ++
Sbjct: 505  -VKKRGKDNKAVVASDIMYVVGQYPRF---------------------LKAHWNFLRTVI 542

Query: 587  GKIATNLKCYTES-QEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFLE 645
             K+   +    E  Q++   T    ++    +   +   + +     +    ++    L+
Sbjct: 543  LKLFEFMHETHEGVQDMACDTFIKIVQKCKYHFVIQQPRESEPFIQTIIRDIQKTTADLQ 602

Query: 646  EYRCSRSRTTFYYTIGWLIFMEESPVKFKSSMDPLLQVFISLESTPDSMFRTDAVKCALI 705
                 +   TFY   G +I  E S  +    +  L+Q+      T       +       
Sbjct: 603  ----PQQVHTFYKACGIIISEERSVAERNRLLSDLMQLPNMAWDTIVEQSTANPTLLLDS 658

Query: 706  GLMRDLRGI-----AMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFM 760
              ++ +  I     A+ T+    +      +Y   + L     S  +        +    
Sbjct: 659  ETVKIIANIIKTNVAVCTSMGADFYPQLGHIYYNMLQLYRAVSSMISAQVAAEGLIATKT 718

Query: 761  AEFVLN---KAQRLTFDSSSPNGILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWI 817
             +       K + L    +  +      +V K++V      +      ++   +   +  
Sbjct: 719  PKVRGLRTIKKEILKLVETYISKARNLDDVVKVLVEPLLNAVLEDYMNNVPDARDAEVLN 778

Query: 818  CFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFL 877
            C T +   +                 +   L    + TL +   D   + +    ++  L
Sbjct: 779  CMTTVVEKVGHMIPQG----------VILILQSVFECTLDMINKDFTEYPEHRVEFYKLL 828

Query: 878  EVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQCAAAVDNLAAFYFNNITMGE 937
            +V+        L L    F   V ++    K  + ++         +L         +  
Sbjct: 829  KVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVNGLQIALDLVKNIERMGNVPF 888

Query: 938  APTSPAAINLARHIVECPTLFPEILKTLFEIVLFED----CGNQWSLSRPMLSLILISEQ 993
            A                   F   +   F ++   D       Q  L   ++SL+    +
Sbjct: 889  A------------NEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLISLV-YDNK 935

Query: 994  VFSDLKAQILTSQPVDQHQRLSVCFDKLMADVARSLDSKNRDKFTQNLTVFRHEF 1048
            +   L  +    Q       LS     ++++    L S+    F   LT    + 
Sbjct: 936  ISVPLYQEAEVPQGTSNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQYKDL 990

PyMOL of 3m1i

>3a6p_A Exportin-5; exportin-5, RANGTP, nuclearexport, importin-BE family, nucleus, phosphoprotein, protein transport; HET: GTP; 2.92A {Homo sapiens} Length = 1204	Back alignment and structure

>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A Length = 1073	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B Length = 963	Back alignment and structure

>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T* Length = 980	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		1051
d1wa5c_		959	a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Sacc	1e-06
d1qbkb_		888	a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapi	8e-05
d2bpta1		861	a.118.1.1 (A:1-861) Importin beta {Baker's yeast (	0.004

>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 959	Back information, alignment and structure


class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: Exportin Cse1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.9 bits (118), Expect = 1e-06
 Identities = 36/324 (11%), Positives = 86/324 (26%), Gaps = 24/324 (7%)

Query: 5   AQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLL 64
           + LE + + L  S  +     +E  L+       +      ++ +   P +  LA +   
Sbjct: 2   SDLETVAKFLAESVIASTAKTSERNLRQLETQDGFGLTLLHVIASTNLPLSTRLAGALFF 61

Query: 65  KQV---------TEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGW 115
           K             H L       I+  ++  +      LQ      + + +  +    +
Sbjct: 62  KNFIKRKWVDENGNHLLPANNVELIKKEIVPLMISLPNNLQV----QIGEAISSIADSDF 117

Query: 116 FDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRD 175
              DR+  L+ +  + LS          L + + +                 ++      
Sbjct: 118 P--DRWPTLLSDLASRLSNDDMVTNKGVLTVAHSIFKRWRPLFRSDELFLEIKLVLDVFT 175

Query: 176 QSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPS 235
                + +     +   +++ AS L  L   L +    +            E        
Sbjct: 176 APFLNLLKTVDEQITANENNKAS-LNILFDVLLVLIKLYYDFNCQDIPEFFEDNIQVGMG 234

Query: 236 AWRPVLEDPSTLQIFFD--YYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHL 293
            +   L   + L    D   +A     +     E +    +    +F         +   
Sbjct: 235 IFHKYLSYSNPLLEDPDETEHASVLIKVKSSIQELVQLYTTRYEDVFGP------MINEF 288

Query: 294 MTGTKEILQTGQGLADHDNYHEYC 317
           +  T  +L +      +D      
Sbjct: 289 IQITWNLLTSISNQPKYDILVSKS 312

PyMOL of d1wa5c_

>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} Length = 888	Back information, alignment and structure

>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 861	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		1051
d1w9ca_		321	Exportin-1 (Xpo1, Crm1) {Human (Homo sapiens) [Tax	99.92
d1wa5c_		959	Exportin Cse1p {Baker's yeast (Saccharomyces cerev	99.9
d1qbkb_		888	Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96	99.74
d2bpta1		861	Importin beta {Baker's yeast (Saccharomyces cerevi	99.59
d1qgra_		876	Importin beta {Human (Homo sapiens) [TaxId: 9606]}	99.28
d1ibrb_		458	Importin beta {Human (Homo sapiens) [TaxId: 9606]}	98.57

>d1w9ca_ a.118.1.19 (A:) Exportin-1 (Xpo1, Crm1) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Exportin HEAT-like repeat
domain: Exportin-1 (Xpo1, Crm1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4.7e-23  Score=155.88  Aligned_cols=250  Identities=17%  Similarity=0.259  Sum_probs=167.8

Q ss_pred             HHHHHHHHHHHHCCCCCEECCCCCCCHH---HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             8999999999741235111247881135---4699999999999976507998111676556559999999998260996
Q 001571          754 TPLLKFMAEFVLNKAQRLTFDSSSPNGI---LLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWICFTILARALAGNY  830 (1051)
Q Consensus       754 ~~iLkl~~~~~~n~~~ri~f~~~s~~~~---~lf~~~~~ii~~y~~~~~~~~~~~~~~~~~~k~i~~~l~il~~~l~~~~  830 (1051)
                      ..+||++..++..- .       .++.+   ++-..+..++..|.+.   .|..+  +++.+    .++..+.+.+++.+
T Consensus        47 keiLkLi~t~i~~~-~-------d~~~v~~~~i~pl~~~vL~DY~~~---~p~~R--~~eVL----~l~~~ii~kl~~~~  109 (321)
T d1w9ca_          47 RETLKLISGWVSRS-N-------DPQMVAENFVPPLLDAVLIDYQRN---VPAAR--EPEVL----STMAIIVNKLGGHI  109 (321)
T ss_dssp             HHHHHHHHHHHTTC-S-------CHHHHHHHTHHHHHHHHHHHHHTS---CGGGC--CTHHH----HHHHHHHHHHGGGG
T ss_pred             HHHHHHHHHHHHCC-C-------CHHHHHHHHHHHHHHHHHHHHHHC---CHHHC--CHHHH----HHHHHHHHHHHHHH
T ss_conf             99999999998438-9-------799999987888999999998847---61102--67599----99999999887863


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             33456554699718999999999640568246860286489999999999955377664589789999999999820488
Q 001571          831 VNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGL  910 (1051)
Q Consensus       831 vnfg~~~~y~D~~~~~~~~~~l~l~l~ip~~dl~~yPkl~~~~f~ll~~~~~~~~~~l~~l~~~~f~~i~~sl~~gl~~~  910 (1051)
                                .+.++.+++.++++++.|..+|+.+||++|..||+|++.+++.|++.++++|++.|+.+++++.||++|.
T Consensus       110 ----------~~~v~~I~~~VFe~Tl~MI~~df~~yPehR~~ff~LL~~i~~~cf~~ll~lp~~qf~~vidsi~wa~kH~  179 (321)
T d1w9ca_         110 ----------TAEIPQIFDAVFECTLNMINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHT  179 (321)
T ss_dssp             ----------GGGHHHHHHHHHHHHHHHHSSTTTCSHHHHHHHHHHHHHHHHHCTTHHHHSCHHHHHHHHHHHHHHTTCS
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHCCCC
T ss_conf             ----------5579999999999999998632200809899999999999997889998499999999999999981899


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHH----HCHHHHHH
Q ss_conf             84778599999999999998841368999974789999887209991899999999999416777501----00335588
Q 001571          911 DTNISSQCAAAVDNLAAFYFNNITMGEAPTSPAAINLARHIVECPTLFPEILKTLFEIVLFEDCGNQW----SLSRPMLS  986 (1051)
Q Consensus       911 ~~~i~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~ll~~~~~~~~----~~s~~L~~  986 (1051)
                      +++|+..|++++..+...+.+.        .+.++.+.+      +.+..++..+|.+++..+|+..+    .+-+.|+.
T Consensus       180 ~~~V~~~gL~~l~~ll~n~~~~--------~~~~~~F~~------~y~~~il~~if~vltD~~Hk~gf~~q~~iL~~Lf~  245 (321)
T d1w9ca_         180 MRNVADTGLQILFTLLQNVAQE--------EAAAQSFYQ------TYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFN  245 (321)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHC--------HHHHHHHHH------HHHHHHHHHHHHHHHSSSCCTTHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHC--------HHHHHHHHH------HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_conf             6689999999999999987627--------487999999------99999999999998870178779999999999999


Q ss_pred             HHHC--------------CHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf             8816--------------9789999999998-04991368899999999773431046923398889989999998623
Q 001571          987 LILI--------------SEQVFSDLKAQIL-TSQPVDQHQRLSVCFDKLMADVARSLDSKNRDKFTQNLTVFRHEFRV 1050 (1051)
Q Consensus       987 li~~--------------~~~~f~~l~~~li-~~q~~~~~~~l~~af~~L~~~i~~~l~~~nr~~F~~nl~~F~~~vr~ 1050 (1051)
                      ++-.              ++.+..++..+++ +..|.-.++.+...-..|.+      ...++.+|+.++..|+-.+|.
T Consensus       246 ive~~~i~~~l~~~~~~~n~~~l~e~l~~lL~~~Fp~l~~~qi~~fv~~Lf~------~~~d~~~Fk~~lrDFLI~~ke  318 (321)
T d1w9ca_         246 LVEEGKISTSLNPGNPVNNQIFLQEYVANLLKSAFPHLQDAQVKLFVTGLFS------LNQDIPAFKEHLRDFLVQIKE  318 (321)
T ss_dssp             HHHTTCCCSCSCSSSCCCHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHH------TTTCHHHHHHHHHHHHHHHHT
T ss_pred             HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH------CCCCHHHHHHHHHHHHHHHHH
T ss_conf             9980544455553445545999999999999975789999999999999987------448799999999889687650

PyMOL of d1w9ca_

>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure