Citrus Sinensis ID: 001576
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1050 | 2.2.26 [Sep-21-2011] | |||||||
| Q84JA6 | 1049 | Cellulose synthase A cata | yes | no | 0.982 | 0.983 | 0.787 | 0.0 | |
| Q9AV71 | 1063 | Cellulose synthase A cata | yes | no | 0.962 | 0.951 | 0.785 | 0.0 | |
| Q69V23 | 1093 | Probable cellulose syntha | no | no | 0.984 | 0.946 | 0.671 | 0.0 | |
| Q9SWW6 | 1026 | Cellulose synthase A cata | no | no | 0.949 | 0.971 | 0.677 | 0.0 | |
| Q851L8 | 1092 | Probable cellulose syntha | no | no | 0.984 | 0.946 | 0.666 | 0.0 | |
| A2XNT2 | 1092 | Probable cellulose syntha | N/A | no | 0.984 | 0.946 | 0.666 | 0.0 | |
| Q69P51 | 1055 | Cellulose synthase A cata | no | no | 0.952 | 0.947 | 0.664 | 0.0 | |
| A2Z1C8 | 1055 | Cellulose synthase A cata | N/A | no | 0.952 | 0.947 | 0.664 | 0.0 | |
| Q6AT26 | 1076 | Probable cellulose syntha | no | no | 0.979 | 0.955 | 0.651 | 0.0 | |
| A2Y0X2 | 1076 | Probable cellulose syntha | N/A | no | 0.979 | 0.955 | 0.651 | 0.0 |
| >sp|Q84JA6|CESA4_ARATH Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1 | Back alignment and function desciption |
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Score = 1695 bits (4390), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 826/1049 (78%), Positives = 904/1049 (86%), Gaps = 17/1049 (1%)
Query: 18 ELHVMHANEERPPTRQSGSKLCRVCGDEIGLKENGELFVACHECGFPVCRPCYEYERSEG 77
E + M + ++ +K+C+VCGDE+ +NG+ FVACH C +PVC+PCYEYERS G
Sbjct: 2 EPNTMASFDDEHRHSSFSAKICKVCGDEVKDDDNGQTFVACHVCVYPVCKPCYEYERSNG 61
Query: 78 SQCCPGCNTRYKRHKGCARVAGDEEDNFDDDFEDEFKNHYDNQDHDQHHHVTTTRSENGD 137
++CCP CNT YKRHKG ++AGDEE+N DD +DE Y QD H SENGD
Sbjct: 62 NKCCPQCNTLYKRHKGSPKIAGDEENNGPDDSDDELNIKY-RQDGSSIHQNFAYGSENGD 120
Query: 138 NNQNQFLNGPG---SFAGSVAGKDFEGDKEGYSSAEWQERVEKWKIRQEKRGLVTKDDGG 194
N Q G S GSV GKDFE +++GY+ AEW+ERV+KWK RQEKRGLVTK +
Sbjct: 121 YNSKQQWRPNGRAFSSTGSVLGKDFEAERDGYTDAEWKERVDKWKARQEKRGLVTKGEQT 180
Query: 195 NDQGDGDDDFLMAE-ARQPLWRKVPIPSSKINPYRIVIILRLFILAFFLRFRILTPAYDA 253
N+ + D++ + ARQPLWRKVPI SSKI+PYRIVI+LRL IL FF RFRILTPA DA
Sbjct: 181 NEDKEDDEEEYLDAEARQPLWRKVPISSSKISPYRIVIVLRLVILVFFFRFRILTPAKDA 240
Query: 254 FPLWIISVICEVWFAFSWILDQFPKWFPITRETYLDRLSIRFEREGEPNRLAPVDVFVST 313
+PLW+ISVICE+WFA SWILDQFPKWFPI RETYLDRLS+RFER+GE N+LAPVDVFVST
Sbjct: 241 YPLWLISVICEIWFALSWILDQFPKWFPINRETYLDRLSMRFERDGEKNKLAPVDVFVST 300
Query: 314 VDPLKEPPIITANTVLSILSMDYPVDKVSCYVSDDGASMLLFDALSETAEFARRWVPFCK 373
VDPLKEPPIITANT+LSIL++DYPV+KVSCYVSDDGASMLLFD LSET+EFARRWVPFCK
Sbjct: 301 VDPLKEPPIITANTILSILAVDYPVNKVSCYVSDDGASMLLFDTLSETSEFARRWVPFCK 360
Query: 374 KYIIEPRAPEFYFSQKIDYLKDKVQPTFVKDRRAMKREYEEFKVRINALVSKAQKKPEEG 433
KY +EPRAPEFYFS+KIDYLKDKVQ TFVKDRRAMKREYEEFKVRINALV+KAQKKPEEG
Sbjct: 361 KYNVEPRAPEFYFSEKIDYLKDKVQTTFVKDRRAMKREYEEFKVRINALVAKAQKKPEEG 420
Query: 434 WVMQDGTPWPGNNTRDHPGMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYNHHKKAGA 493
WVMQDGTPWPGNNTRDHPGMIQVYLG EGA D++G ELPRLVYVSREKRPGY HHKKAGA
Sbjct: 421 WVMQDGTPWPGNNTRDHPGMIQVYLGKEGAFDIDGNELPRLVYVSREKRPGYAHHKKAGA 480
Query: 494 MNALVRVSAVLTNAPFILNLDCDHYLNNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGI 553
MNA+VRVSAVLTNAPF+LNLDCDHY+NNSKA+RE+MCFLMDPQLGKKLCYVQFPQRFDGI
Sbjct: 481 MNAMVRVSAVLTNAPFMLNLDCDHYINNSKAIRESMCFLMDPQLGKKLCYVQFPQRFDGI 540
Query: 554 DRHDRYANRNIVFFDINMLGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKRPKMTCDCW 613
D +DRYANRNIVFFDINM GLDGIQGPVYVGTGCVFNR ALYGY+PPVSEKR KMTCDCW
Sbjct: 541 DLNDRYANRNIVFFDINMRGLDGIQGPVYVGTGCVFNRPALYGYEPPVSEKRKKMTCDCW 600
Query: 614 PSWCCCCCGGSRKSK----------SKKKGDKRGFFSGLYTKKKKMMGKNYVRKGSAPVF 663
PSW CCCCGG ++ K K + + K M + R + +F
Sbjct: 601 PSWICCCCGGGNRNHKSDSSKKKSGIKSLFSKLKKKTKKKSDDKTMSSYSRKRSSTEAIF 660
Query: 664 DLEEIEEGLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLKEDGGLPEGTNSTSLIKEA 723
DLE+IEEGLEGYDELEKSSLMSQKNFEKRFG SPVFIASTL E+GGLPE TN++SLIKEA
Sbjct: 661 DLEDIEEGLEGYDELEKSSLMSQKNFEKRFGMSPVFIASTLMENGGLPEATNTSSLIKEA 720
Query: 724 IHVISCGYEEKTEWGKEIGWIYGSITEDILTGFKMHCRGWKSVYCVPKRPAFKGSAPINL 783
IHVISCGYEEKTEWGKEIGWIYGS+TEDILTGF+MHCRGWKSVYC+PKRPAFKGSAPINL
Sbjct: 721 IHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFRMHCRGWKSVYCMPKRPAFKGSAPINL 780
Query: 784 SDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKWLERLAYTNTIVYPFTSIPLLAYCTL 843
SDRLHQVLRWALGSVEIF SRHCPLWY +GGKLK LERLAY NTIVYPFTSIPLLAYCT+
Sbjct: 781 SDRLHQVLRWALGSVEIFFSRHCPLWYAWGGKLKILERLAYINTIVYPFTSIPLLAYCTI 840
Query: 844 PAICLLTGKFIIPTLNNLASIWFLALFLSIIVTGVLELRWSGVSIEDWWRNEQFWVIGGV 903
PA+CLLTGKFIIPT+NN ASIWFLALFLSII T +LELRWSGVSI D WRNEQFWVIGGV
Sbjct: 841 PAVCLLTGKFIIPTINNFASIWFLALFLSIIATAILELRWSGVSINDLWRNEQFWVIGGV 900
Query: 904 SAHLFAVFQGLLKVLAGVDTNFTVTSKSAEDE--EFGELYLFKWTTLLIPPTTLIILNMV 961
SAHLFAVFQGLLKVL GVDTNFTVTSK A DE EFG+LYLFKWTTLLIPPTTLIILNMV
Sbjct: 901 SAHLFAVFQGLLKVLFGVDTNFTVTSKGASDEADEFGDLYLFKWTTLLIPPTTLIILNMV 960
Query: 962 GVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSVLLA 1021
GVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWS+LLA
Sbjct: 961 GVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLA 1020
Query: 1022 SIFSLLWVRIDPFLPKQKGPLLKQCGVEC 1050
SIFSL+WVRIDPFLPKQ GPLLKQCGV+C
Sbjct: 1021 SIFSLVWVRIDPFLPKQTGPLLKQCGVDC 1049
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Catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation. Involved in the secondary cell wall formation. Required for the xylem cell wall thickening. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 2 |
| >sp|Q9AV71|CESA7_ORYSJ Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q69V23|CESA3_ORYSJ Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9SWW6|CESA7_ARATH Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q851L8|CESA5_ORYSJ Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1 | Back alignment and function description |
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| >sp|A2XNT2|CESA5_ORYSI Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q69P51|CESA9_ORYSJ Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1 | Back alignment and function description |
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| >sp|A2Z1C8|CESA9_ORYSI Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q6AT26|CESA1_ORYSJ Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1 | Back alignment and function description |
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| >sp|A2Y0X2|CESA1_ORYSI Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1050 | ||||||
| 212960417 | 1049 | cellulose synthase [Betula luminifera] | 0.994 | 0.995 | 0.882 | 0.0 | |
| 183211894 | 1048 | cellulose synthase [Betula platyphylla] | 0.993 | 0.995 | 0.876 | 0.0 | |
| 225438009 | 1044 | PREDICTED: cellulose synthase A catalyti | 0.989 | 0.995 | 0.870 | 0.0 | |
| 357449211 | 1039 | Cellulose synthase [Medicago truncatula] | 0.982 | 0.993 | 0.835 | 0.0 | |
| 332356343 | 1042 | cellulose synthase [Populus tomentosa] | 0.986 | 0.994 | 0.847 | 0.0 | |
| 47078492 | 1042 | cellulose synthase [Populus tremula x Po | 0.986 | 0.994 | 0.843 | 0.0 | |
| 328496823 | 1047 | cellulose synthase catalytic subunit [Eu | 0.985 | 0.988 | 0.840 | 0.0 | |
| 328496821 | 1047 | cellulose synthase catalytic subunit [Eu | 0.985 | 0.988 | 0.841 | 0.0 | |
| 162955782 | 1045 | cellulose synthase [Eucalyptus grandis] | 0.987 | 0.992 | 0.850 | 0.0 | |
| 340343833 | 1045 | cellulose synthase A [Eucalyptus camaldu | 0.987 | 0.992 | 0.849 | 0.0 |
| >gi|212960417|gb|ACJ38666.1| cellulose synthase [Betula luminifera] | Back alignment and taxonomy information |
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Score = 1857 bits (4811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 931/1055 (88%), Positives = 984/1055 (93%), Gaps = 11/1055 (1%)
Query: 1 MASNPM-GSFVAGSHSRNELHVMHAN-EERPPTRQSGSKLCRVCGDEIGLKENGELFVAC 58
MASN M G VAGSH+RNELHV+H + E+RPPTRQS SK CRVCGDEIG KE+GELFVAC
Sbjct: 1 MASNAMTGGLVAGSHTRNELHVLHGDDEQRPPTRQSVSKTCRVCGDEIGYKEDGELFVAC 60
Query: 59 HECGFPVCRPCYEYERSEGSQCCPGCNTRYKRHKGCARVAGDEEDNFDDDFED---EFKN 115
H CGFPVCRPCY+YERSEG+Q CP CNTRYKR KGC RVAGD+++NFD D D + KN
Sbjct: 61 HVCGFPVCRPCYDYERSEGNQSCPQCNTRYKRQKGCPRVAGDDDENFDADDFDDEFQTKN 120
Query: 116 HYDNQDHDQHHHVTTTRSENGDNNQNQFLNGPGSFAGSVAGKDFEGDKEGYSSAEWQERV 175
H+D D D+ H T SENGD N Q+ GSFAGSVAGKDFEG++E YS+AEW+ER+
Sbjct: 121 HHD--DSDRQH--VTIHSENGDYNHPQW-KPTGSFAGSVAGKDFEGEREAYSNAEWKERI 175
Query: 176 EKWKIRQEKRGLVTKDDGGNDQGDGDDDFLMAEARQPLWRKVPIPSSKINPYRIVIILRL 235
EKWK+RQEKRGLV KDDG NDQGD DDFL+AEARQPLWRKVPI SSKI+PYRIVI+LRL
Sbjct: 176 EKWKVRQEKRGLVNKDDGNNDQGDDQDDFLLAEARQPLWRKVPISSSKISPYRIVIVLRL 235
Query: 236 FILAFFLRFRILTPAYDAFPLWIISVICEVWFAFSWILDQFPKWFPITRETYLDRLSIRF 295
ILAFFLRFR+LTPAYDA+PLWIISVICE WFAFSWILDQFPKWFPITRETYLDRLS+RF
Sbjct: 236 IILAFFLRFRVLTPAYDAYPLWIISVICETWFAFSWILDQFPKWFPITRETYLDRLSMRF 295
Query: 296 EREGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSILSMDYPVDKVSCYVSDDGASMLLF 355
EREGEPNRL+PVDVFVSTVDPLKEPPIITANTVLSILS+DYPVDKVSCYVSDDGASMLLF
Sbjct: 296 EREGEPNRLSPVDVFVSTVDPLKEPPIITANTVLSILSVDYPVDKVSCYVSDDGASMLLF 355
Query: 356 DALSETAEFARRWVPFCKKYIIEPRAPEFYFSQKIDYLKDKVQPTFVKDRRAMKREYEEF 415
D LSETAEFARRWVPFC+KY IEPRAPE+YFS+K+DYLKDKV P+FVK+RRAMKREYEEF
Sbjct: 356 DTLSETAEFARRWVPFCRKYSIEPRAPEYYFSEKMDYLKDKVLPSFVKERRAMKREYEEF 415
Query: 416 KVRINALVSKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSEGALDVEGKELPRLV 475
KVRINALV+KAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSEGALDVEGKELPRLV
Sbjct: 416 KVRINALVAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSEGALDVEGKELPRLV 475
Query: 476 YVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFILNLDCDHYLNNSKAVREAMCFLMDP 535
YVSREKRPGY HHKKAGAMNALVRVSAVLTNAPF+LNLDCDHY+NNSKAVREAMCFLMDP
Sbjct: 476 YVSREKRPGYQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDP 535
Query: 536 QLGKKLCYVQFPQRFDGIDRHDRYANRNIVFFDINMLGLDGIQGPVYVGTGCVFNRQALY 595
QLGKKLCYVQFPQRFDGIDRHDRYANRNIVFFDINM GLDGIQGPVYVGTGCVFNR ALY
Sbjct: 536 QLGKKLCYVQFPQRFDGIDRHDRYANRNIVFFDINMKGLDGIQGPVYVGTGCVFNRPALY 595
Query: 596 GYDPPVSEKRPKMTCDCWPSWCCCCCGGSRKSKSKKKGDKRGFFSGLYTKKKKMMGKNYV 655
GYDPPVSEKRPKMTCDC PSWCCCCCGGSRKSK KKKG RG LYTKKKKMMGKNYV
Sbjct: 596 GYDPPVSEKRPKMTCDCLPSWCCCCCGGSRKSKPKKKGG-RGLLGRLYTKKKKMMGKNYV 654
Query: 656 RKGSAPVFDLEEIEEGLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLKEDGGLPEGTN 715
RKGS +FDLE+IEEGLEGYDELEKSS MSQKNFEKRFGQSPVFIASTL E+GGLPEGT+
Sbjct: 655 RKGSGNMFDLEDIEEGLEGYDELEKSSPMSQKNFEKRFGQSPVFIASTLMEEGGLPEGTS 714
Query: 716 STSLIKEAIHVISCGYEEKTEWGKEIGWIYGSITEDILTGFKMHCRGWKSVYCVPKRPAF 775
TSLIKEAIHVISCGYEEKTEWGKEIGWIYGS+TEDILTGFKMHCRGWKSVYC+PKRPAF
Sbjct: 715 PTSLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAF 774
Query: 776 KGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKWLERLAYTNTIVYPFTSI 835
KGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWY YGGKLKWLER+AY NTIVYPFTSI
Sbjct: 775 KGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYAYGGKLKWLERMAYINTIVYPFTSI 834
Query: 836 PLLAYCTLPAICLLTGKFIIPTLNNLASIWFLALFLSIIVTGVLELRWSGVSIEDWWRNE 895
PLLAYCTLPA+CLLTGKFIIPTL NLASI+F+ALFLSII TGVLELRWSGVSIED WRNE
Sbjct: 835 PLLAYCTLPAVCLLTGKFIIPTLTNLASIYFMALFLSIIATGVLELRWSGVSIEDLWRNE 894
Query: 896 QFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTSKSAEDEEFGELYLFKWTTLLIPPTTL 955
QFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTSK+A+D EFGELYLFKWTTLLIPPTTL
Sbjct: 895 QFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTSKTADDAEFGELYLFKWTTLLIPPTTL 954
Query: 956 IILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVL 1015
II+NMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVL
Sbjct: 955 IIMNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVL 1014
Query: 1016 WSVLLASIFSLLWVRIDPFLPKQKGPLLKQCGVEC 1050
WSVLLASIFSL+WVRIDPFLPKQ GP+LKQCGV+C
Sbjct: 1015 WSVLLASIFSLIWVRIDPFLPKQTGPILKQCGVDC 1049
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Source: Betula luminifera Species: Betula luminifera Genus: Betula Family: Betulaceae Order: Fagales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|183211894|gb|ACC59197.1| cellulose synthase [Betula platyphylla] | Back alignment and taxonomy information |
|---|
| >gi|225438009|ref|XP_002273521.1| PREDICTED: cellulose synthase A catalytic subunit 4 [UDP-forming]-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|357449211|ref|XP_003594882.1| Cellulose synthase [Medicago truncatula] gi|355483930|gb|AES65133.1| Cellulose synthase [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|332356343|gb|AEE60895.1| cellulose synthase [Populus tomentosa] | Back alignment and taxonomy information |
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| >gi|47078492|gb|AAT09894.1| cellulose synthase [Populus tremula x Populus tremuloides] | Back alignment and taxonomy information |
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| >gi|328496823|dbj|BAK18577.1| cellulose synthase catalytic subunit [Eucalyptus globulus] | Back alignment and taxonomy information |
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| >gi|328496821|dbj|BAK18576.1| cellulose synthase catalytic subunit [Eucalyptus globulus] | Back alignment and taxonomy information |
|---|
| >gi|162955782|gb|ABY25275.1| cellulose synthase [Eucalyptus grandis] | Back alignment and taxonomy information |
|---|
| >gi|340343833|gb|AEK31216.1| cellulose synthase A [Eucalyptus camaldulensis] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1050 | ||||||
| TAIR|locus:2172457 | 1049 | CESA4 "cellulose synthase A4" | 0.965 | 0.966 | 0.738 | 0.0 | |
| TAIR|locus:2156789 | 1065 | CEV1 "CONSTITUTIVE EXPRESSION | 0.424 | 0.418 | 0.714 | 0.0 | |
| TAIR|locus:2178935 | 1026 | IRX3 "IRREGULAR XYLEM 3" [Arab | 0.416 | 0.425 | 0.732 | 0.0 | |
| TAIR|locus:2124167 | 985 | IRX1 "IRREGULAR XYLEM 1" [Arab | 0.515 | 0.549 | 0.592 | 0.0 | |
| TAIR|locus:2127776 | 1081 | CESA1 "cellulose synthase 1" [ | 0.419 | 0.407 | 0.705 | 0.0 | |
| TAIR|locus:2176090 | 1084 | CESA6 "cellulose synthase 6" [ | 0.423 | 0.410 | 0.700 | 0.0 | |
| TAIR|locus:2178193 | 1069 | CESA5 "cellulose synthase 5" [ | 0.423 | 0.416 | 0.691 | 0.0 | |
| TAIR|locus:2136308 | 1084 | CESA2 "cellulose synthase A2" | 0.440 | 0.427 | 0.670 | 0.0 | |
| TAIR|locus:2052576 | 1088 | CESA9 "cellulose synthase A9" | 0.423 | 0.409 | 0.685 | 0.0 | |
| TAIR|locus:2040080 | 1065 | CESA10 "cellulose synthase 10" | 0.419 | 0.413 | 0.667 | 0.0 |
| TAIR|locus:2172457 CESA4 "cellulose synthase A4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3996 (1411.7 bits), Expect = 0., P = 0.
Identities = 761/1031 (73%), Positives = 827/1031 (80%)
Query: 36 SKLCRVCGDEIGLKENGELFVACHECGFPVCRPCYEYERSEGSQCCPGCNTRYKRHKGCA 95
+K+C+VCGDE+ +NG+ FVACH C +PVC+PCYEYERS G++CCP CNT YKRHKG
Sbjct: 20 AKICKVCGDEVKDDDNGQTFVACHVCVYPVCKPCYEYERSNGNKCCPQCNTLYKRHKGSP 79
Query: 96 RVAGXXXXXXXXXXXXXXKXXXXXXXXXXXXXVTTTRSENGD-NNQNQFL-NGPG-SFAG 152
++AG SENGD N++ Q+ NG S G
Sbjct: 80 KIAGDEENNGPDDSDDELNIKYRQDGSSIHQNFAYG-SENGDYNSKQQWRPNGRAFSSTG 138
Query: 153 SVAGKDFEGDKEGYSSAEWQERVEKWKIRQEKRGLVTKXXXXXXXXXXXXX-FLMAEARQ 211
SV GKDFE +++GY+ AEW+ERV+KWK RQEKRGLVTK +L AEARQ
Sbjct: 139 SVLGKDFEAERDGYTDAEWKERVDKWKARQEKRGLVTKGEQTNEDKEDDEEEYLDAEARQ 198
Query: 212 PLWRKVPIPSSKINPYXXXXXXXXXXXXXXXXXXXXTPAYDAFPLWIISVICEVWFAFSW 271
PLWRKVPI SSKI+PY TPA DA+PLW+ISVICE+WFA SW
Sbjct: 199 PLWRKVPISSSKISPYRIVIVLRLVILVFFFRFRILTPAKDAYPLWLISVICEIWFALSW 258
Query: 272 ILDQFPKWFPITRETYLDRLSIRFEREGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSI 331
ILDQFPKWFPI RETYLDRLS+RFER+GE N+LAPVDVFVSTVDPLKEPPIITANT+LSI
Sbjct: 259 ILDQFPKWFPINRETYLDRLSMRFERDGEKNKLAPVDVFVSTVDPLKEPPIITANTILSI 318
Query: 332 LSMDYPVDKVSCYVSDDGASMLLFDALSETAEFARRWVPFCKKYIIEPRAPEFYFSQKID 391
L++DYPV+KVSCYVSDDGASMLLFD LSET+EFARRWVPFCKKY +EPRAPEFYFS+KID
Sbjct: 319 LAVDYPVNKVSCYVSDDGASMLLFDTLSETSEFARRWVPFCKKYNVEPRAPEFYFSEKID 378
Query: 392 YLKDKVQPTFVKDRRAMKREYEEFKVRINALVSKAQKKPEEGWVMQDGTPWPGNNTRDHP 451
YLKDKVQ TFVKDRRAMKREYEEFKVRINALV+KAQKKPEEGWVMQDGTPWPGNNTRDHP
Sbjct: 379 YLKDKVQTTFVKDRRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGNNTRDHP 438
Query: 452 GMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFIL 511
GMIQVYLG EGA D++G ELPRLVYVSREKRPGY HHKKAGAMNA+VRVSAVLTNAPF+L
Sbjct: 439 GMIQVYLGKEGAFDIDGNELPRLVYVSREKRPGYAHHKKAGAMNAMVRVSAVLTNAPFML 498
Query: 512 NLDCDHYLNNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNIVFFDINM 571
NLDCDHY+NNSKA+RE+MCFLMDPQLGKKLCYVQFPQRFDGID +DRYANRNIVFFDINM
Sbjct: 499 NLDCDHYINNSKAIRESMCFLMDPQLGKKLCYVQFPQRFDGIDLNDRYANRNIVFFDINM 558
Query: 572 LGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKRPKMTXXXXXXXXXXXXXXXXXXXXXX 631
GLDGIQGPVYVGTGCVFNR ALYGY+PPVSEKR KMT
Sbjct: 559 RGLDGIQGPVYVGTGCVFNRPALYGYEPPVSEKRKKMTCDCWPSWICCCCGGGNRNHKSD 618
Query: 632 XXXXXXXXXXLYTKKKKMMGK--------NYVRKGSAP--VFXXXXXXXXXXXXXXXXKS 681
L++K KK K +Y RK S+ +F KS
Sbjct: 619 SSKKKSGIKSLFSKLKKKTKKKSDDKTMSSYSRKRSSTEAIFDLEDIEEGLEGYDELEKS 678
Query: 682 SLMSQKNFEKRFGQSPVFIASTLKEDGGLPEGTNSTSLIKEAIHVISCGYEEKTEWGKEI 741
SLMSQKNFEKRFG SPVFIASTL E+GGLPE TN++SLIKEAIHVISCGYEEKTEWGKEI
Sbjct: 679 SLMSQKNFEKRFGMSPVFIASTLMENGGLPEATNTSSLIKEAIHVISCGYEEKTEWGKEI 738
Query: 742 GWIYGSITEDILTGFKMHCRGWKSVYCVPKRPAFKGSAPINLSDRLHQVLRWALGSVEIF 801
GWIYGS+TEDILTGF+MHCRGWKSVYC+PKRPAFKGSAPINLSDRLHQVLRWALGSVEIF
Sbjct: 739 GWIYGSVTEDILTGFRMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIF 798
Query: 802 LSRHCPLWYGYGGKLKWLERLAYTNTIVYPFTSIPLLAYCTLPAICLLTGKFIIPTLNNL 861
SRHCPLWY +GGKLK LERLAY NTIVYPFTSIPLLAYCT+PA+CLLTGKFIIPT+NN
Sbjct: 799 FSRHCPLWYAWGGKLKILERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTINNF 858
Query: 862 ASIWFLALFLSIIVTGVLELRWSGVSIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGV 921
ASIWFLALFLSII T +LELRWSGVSI D WRNEQFWVIGGVSAHLFAVFQGLLKVL GV
Sbjct: 859 ASIWFLALFLSIIATAILELRWSGVSINDLWRNEQFWVIGGVSAHLFAVFQGLLKVLFGV 918
Query: 922 DTNFTVTSKSAEDE--EFGELYLFKWXXXXXXXXXXXXXNMVGVVAGVSDAINNGYGSWG 979
DTNFTVTSK A DE EFG+LYLFKW NMVGVVAGVSDAINNGYGSWG
Sbjct: 919 DTNFTVTSKGASDEADEFGDLYLFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWG 978
Query: 980 PLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSVLLASIFSLLWVRIDPFLPKQK 1039
PLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWS+LLASIFSL+WVRIDPFLPKQ
Sbjct: 979 PLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLVWVRIDPFLPKQT 1038
Query: 1040 GPLLKQCGVEC 1050
GPLLKQCGV+C
Sbjct: 1039 GPLLKQCGVDC 1049
|
|
| TAIR|locus:2156789 CEV1 "CONSTITUTIVE EXPRESSION OF VSP 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178935 IRX3 "IRREGULAR XYLEM 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2124167 IRX1 "IRREGULAR XYLEM 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2127776 CESA1 "cellulose synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2176090 CESA6 "cellulose synthase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178193 CESA5 "cellulose synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2136308 CESA2 "cellulose synthase A2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2052576 CESA9 "cellulose synthase A9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2040080 CESA10 "cellulose synthase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| A2XN66 | CESA2_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.6439 | 0.9438 | 0.9235 | N/A | no |
| A2Z1C8 | CESA9_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.6648 | 0.9523 | 0.9478 | N/A | no |
| Q94JQ6 | CESA6_ARATH | 2, ., 4, ., 1, ., 1, 2 | 0.7007 | 0.8285 | 0.8025 | no | no |
| Q84JA6 | CESA4_ARATH | 2, ., 4, ., 1, ., 1, 2 | 0.7874 | 0.9828 | 0.9837 | yes | no |
| Q9AV71 | CESA7_ORYSJ | 2, ., 4, ., 1, ., 1, 2 | 0.7859 | 0.9628 | 0.9510 | yes | no |
| A2XNT2 | CESA5_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.6663 | 0.9847 | 0.9468 | N/A | no |
| A2Y0X2 | CESA1_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.6511 | 0.9790 | 0.9553 | N/A | no |
| A2WV32 | CESA4_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.6308 | 0.92 | 0.9767 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.4.1.12 | 0.979 |
| 3rd Layer | 2.4.1 | 0.983 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1050 | |||
| PLN02915 | 1044 | PLN02915, PLN02915, cellulose synthase A [UDP-form | 0.0 | |
| PLN02436 | 1094 | PLN02436, PLN02436, cellulose synthase A | 0.0 | |
| PLN02638 | 1079 | PLN02638, PLN02638, cellulose synthase A (UDP-form | 0.0 | |
| PLN02189 | 1040 | PLN02189, PLN02189, cellulose synthase | 0.0 | |
| PLN02400 | 1085 | PLN02400, PLN02400, cellulose synthase | 0.0 | |
| PLN02195 | 977 | PLN02195, PLN02195, cellulose synthase A | 0.0 | |
| pfam03552 | 716 | pfam03552, Cellulose_synt, Cellulose synthase | 0.0 | |
| PLN02248 | 1135 | PLN02248, PLN02248, cellulose synthase-like protei | 0.0 | |
| PLN02893 | 734 | PLN02893, PLN02893, Cellulose synthase-like protei | 2e-95 | |
| PLN02190 | 756 | PLN02190, PLN02190, cellulose synthase-like protei | 6e-91 | |
| PLN02893 | 734 | PLN02893, PLN02893, Cellulose synthase-like protei | 3e-56 | |
| PLN02190 | 756 | PLN02190, PLN02190, cellulose synthase-like protei | 7e-40 | |
| TIGR03030 | 713 | TIGR03030, CelA, cellulose synthase catalytic subu | 1e-14 | |
| cd06421 | 234 | cd06421, CESA_CelA_like, CESA_CelA_like are involv | 5e-14 | |
| cd06421 | 234 | cd06421, CESA_CelA_like, CESA_CelA_like are involv | 4e-12 | |
| PRK11498 | 852 | PRK11498, bcsA, cellulose synthase catalytic subun | 1e-10 | |
| COG1215 | 439 | COG1215, COG1215, Glycosyltransferases, probably i | 3e-10 | |
| TIGR03030 | 713 | TIGR03030, CelA, cellulose synthase catalytic subu | 6e-08 | |
| pfam14446 | 55 | pfam14446, Prok-RING_1, Prokaryotic RING finger fa | 7e-06 | |
| cd06421 | 234 | cd06421, CESA_CelA_like, CESA_CelA_like are involv | 9e-05 | |
| TIGR03030 | 713 | TIGR03030, CelA, cellulose synthase catalytic subu | 1e-04 | |
| cd06423 | 180 | cd06423, CESA_like, CESA_like is the cellulose syn | 4e-04 | |
| PRK14583 | 444 | PRK14583, hmsR, N-glycosyltransferase; Provisional | 8e-04 |
| >gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit | Back alignment and domain information |
|---|
Score = 2114 bits (5479), Expect = 0.0
Identities = 903/1045 (86%), Positives = 956/1045 (91%), Gaps = 20/1045 (1%)
Query: 24 ANEERPPTRQSGS-KLCRVCGDEIGLKENGELFVACHECGFPVCRPCYEYERSEGSQCCP 82
+E+RPPTRQS K CRVCGDE+G+KE+G+ FVACH CGFPVC+PCYEYERSEG+QCCP
Sbjct: 2 DDEDRPPTRQSADAKTCRVCGDEVGVKEDGQPFVACHVCGFPVCKPCYEYERSEGNQCCP 61
Query: 83 GCNTRYKRHKGCARVAGDEEDNFD-DDFEDEFKNHYDNQDHDQHHHVTTTRSENGDNNQN 141
CNTRYKRHKGC RV GD+E+ D DDFEDEF+ QDH+ H SENGD N
Sbjct: 62 QCNTRYKRHKGCPRVEGDDEEGNDMDDFEDEFQIKS-PQDHEPVHQNVFAGSENGDYNAQ 120
Query: 142 QF-LNGPG-SFAGSVAGKDFEGDKEGYSSAEWQERVEKWKIRQEKRGLVTKDDG--GNDQ 197
Q+ GP S GSVAGKD E ++EGY +AEW++RV+KWK RQEKRGLV KDD G+D+
Sbjct: 121 QWRPGGPAFSSTGSVAGKDLEAEREGYGNAEWKDRVDKWKTRQEKRGLVNKDDSDDGDDK 180
Query: 198 GDGDDDFLMAEARQPLWRKVPIPSSKINPYRIVIILRLFILAFFLRFRILTPAYDAFPLW 257
GD ++++L+AEARQPLWRKVPIPSSKINPYRIVI+LRL IL FF RFRILTPAYDA+PLW
Sbjct: 181 GD-EEEYLLAEARQPLWRKVPIPSSKINPYRIVIVLRLVILCFFFRFRILTPAYDAYPLW 239
Query: 258 IISVICEVWFAFSWILDQFPKWFPITRETYLDRLSIRFEREGEPNRLAPVDVFVSTVDPL 317
+ISVICE+WFA SWILDQFPKWFPI RETYLDRLS+RFER+GEPNRLAPVDVFVSTVDPL
Sbjct: 240 LISVICEIWFALSWILDQFPKWFPINRETYLDRLSMRFERDGEPNRLAPVDVFVSTVDPL 299
Query: 318 KEPPIITANTVLSILSMDYPVDKVSCYVSDDGASMLLFDALSETAEFARRWVPFCKKYII 377
KEPPIITANTVLSIL++DYPVDKVSCYVSDDGASMLLFD LSETAEFARRWVPFCKK+ I
Sbjct: 300 KEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETAEFARRWVPFCKKHNI 359
Query: 378 EPRAPEFYFSQKIDYLKDKVQPTFVKDRRAMKREYEEFKVRINALVSKAQKKPEEGWVMQ 437
EPRAPEFYFSQKIDYLKDKVQPTFVK+RRAMKREYEEFKVRINALV+KAQKKPEEGWVMQ
Sbjct: 360 EPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQ 419
Query: 438 DGTPWPGNNTRDHPGMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYNHHKKAGAMNAL 497
DGTPWPGNNTRDHPGMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYNHHKKAGAMNAL
Sbjct: 420 DGTPWPGNNTRDHPGMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYNHHKKAGAMNAL 479
Query: 498 VRVSAVLTNAPFILNLDCDHYLNNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHD 557
VRVSAVLTNAPF+LNLDCDHY+NNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHD
Sbjct: 480 VRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHD 539
Query: 558 RYANRNIVFFDINMLGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKRPKMTCDCWPSWC 617
RYANRN+VFFDINM GLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKRPKMTCDCWPSWC
Sbjct: 540 RYANRNVVFFDINMKGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKRPKMTCDCWPSWC 599
Query: 618 CCCCGGSRKSKSK--KKGDK--RGFFSGLYTKKKK------MMGKNYVRKGSAPVFDLEE 667
CCCCGG R+ KSK KKG K R GL +KKK MMGK Y RK S VFDLEE
Sbjct: 600 CCCCGGGRRGKSKKSKKGKKGRRSLLGGLKKRKKKGGGGGSMMGKKYGRKKSQAVFDLEE 659
Query: 668 IEEGLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLKEDGGLPEGTNSTSLIKEAIHVI 727
IEEGLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTL EDGGLPEGTN +LIKEAIHVI
Sbjct: 660 IEEGLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLMEDGGLPEGTNPAALIKEAIHVI 719
Query: 728 SCGYEEKTEWGKEIGWIYGSITEDILTGFKMHCRGWKSVYCVPKRPAFKGSAPINLSDRL 787
SCGYEEKTEWGKEIGWIYGS+TEDILTGFKMHCRGWKSVYC+PKRPAFKGSAPINLSDRL
Sbjct: 720 SCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRL 779
Query: 788 HQVLRWALGSVEIFLSRHCPLWYGYGGKLKWLERLAYTNTIVYPFTSIPLLAYCTLPAIC 847
HQVLRWALGSVEIF+SRHCPLWY YGGKLKWLERLAY NTIVYPFTSIPLLAYCT+PA+C
Sbjct: 780 HQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLERLAYINTIVYPFTSIPLLAYCTIPAVC 839
Query: 848 LLTGKFIIPTLNNLASIWFLALFLSIIVTGVLELRWSGVSIEDWWRNEQFWVIGGVSAHL 907
LLTGKFIIPTLNNLASIWFLALFLSII T VLELRWSGVSIED WRNEQFWVIGGVSAHL
Sbjct: 840 LLTGKFIIPTLNNLASIWFLALFLSIIATSVLELRWSGVSIEDLWRNEQFWVIGGVSAHL 899
Query: 908 FAVFQGLLKVLAGVDTNFTVTSKSAEDE--EFGELYLFKWTTLLIPPTTLIILNMVGVVA 965
FAVFQGLLKVL GVDTNFTVTSK+A+DE EFGELYLFKWTTLLIPPTTLIILNMVGVVA
Sbjct: 900 FAVFQGLLKVLGGVDTNFTVTSKAADDEADEFGELYLFKWTTLLIPPTTLIILNMVGVVA 959
Query: 966 GVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSVLLASIFS 1025
GVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWS+LLASIFS
Sbjct: 960 GVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFS 1019
Query: 1026 LLWVRIDPFLPKQKGPLLKQCGVEC 1050
L+WVRIDPFLPKQ GP+LKQCGVEC
Sbjct: 1020 LVWVRIDPFLPKQTGPILKQCGVEC 1044
|
Length = 1044 |
| >gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A | Back alignment and domain information |
|---|
| >gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit | Back alignment and domain information |
|---|
| >gnl|CDD|215121 PLN02189, PLN02189, cellulose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A | Back alignment and domain information |
|---|
| >gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >gnl|CDD|222758 pfam14446, Prok-RING_1, Prokaryotic RING finger family 1 | Back alignment and domain information |
|---|
| >gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >gnl|CDD|133045 cd06423, CESA_like, CESA_like is the cellulose synthase superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|184755 PRK14583, hmsR, N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1050 | |||
| PLN02400 | 1085 | cellulose synthase | 100.0 | |
| PLN02436 | 1094 | cellulose synthase A | 100.0 | |
| PLN02915 | 1044 | cellulose synthase A [UDP-forming], catalytic subu | 100.0 | |
| PLN02638 | 1079 | cellulose synthase A (UDP-forming), catalytic subu | 100.0 | |
| PLN02189 | 1040 | cellulose synthase | 100.0 | |
| PLN02195 | 977 | cellulose synthase A | 100.0 | |
| PLN02248 | 1135 | cellulose synthase-like protein | 100.0 | |
| PF03552 | 720 | Cellulose_synt: Cellulose synthase; InterPro: IPR0 | 100.0 | |
| PLN02190 | 756 | cellulose synthase-like protein | 100.0 | |
| PLN02893 | 734 | Cellulose synthase-like protein | 100.0 | |
| TIGR03030 | 713 | CelA cellulose synthase catalytic subunit (UDP-for | 100.0 | |
| PRK11498 | 852 | bcsA cellulose synthase catalytic subunit; Provisi | 100.0 | |
| PF14569 | 80 | zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A. | 100.0 | |
| PRK05454 | 691 | glucosyltransferase MdoH; Provisional | 100.0 | |
| cd04191 | 254 | Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon | 100.0 | |
| COG1215 | 439 | Glycosyltransferases, probably involved in cell wa | 99.97 | |
| PRK14583 | 444 | hmsR N-glycosyltransferase; Provisional | 99.96 | |
| TIGR03111 | 439 | glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 | 99.96 | |
| PRK11204 | 420 | N-glycosyltransferase; Provisional | 99.95 | |
| PRK14716 | 504 | bacteriophage N4 adsorption protein B; Provisional | 99.94 | |
| cd06421 | 234 | CESA_CelA_like CESA_CelA_like are involved in the | 99.92 | |
| PRK11234 | 727 | nfrB bacteriophage N4 adsorption protein B; Provis | 99.92 | |
| cd06437 | 232 | CESA_CaSu_A2 Cellulose synthase catalytic subunit | 99.92 | |
| cd06427 | 241 | CESA_like_2 CESA_like_2 is a member of the cellulo | 99.9 | |
| cd06435 | 236 | CESA_NdvC_like NdvC_like proteins in this family a | 99.89 | |
| PF13641 | 228 | Glyco_tranf_2_3: Glycosyltransferase like family 2 | 99.86 | |
| PRK15489 | 703 | nfrB bacteriophage N4 adsorption protein B; Provis | 99.83 | |
| TIGR03472 | 373 | HpnI hopanoid biosynthesis associated glycosyl tra | 99.82 | |
| cd04190 | 244 | Chitin_synth_C C-terminal domain of Chitin Synthas | 99.82 | |
| cd04192 | 229 | GT_2_like_e Subfamily of Glycosyltransferase Famil | 99.79 | |
| cd02520 | 196 | Glucosylceramide_synthase Glucosylceramide synthas | 99.77 | |
| cd06434 | 235 | GT2_HAS Hyaluronan synthases catalyze polymerizati | 99.74 | |
| cd06439 | 251 | CESA_like_1 CESA_like_1 is a member of the cellulo | 99.72 | |
| TIGR03469 | 384 | HonB hopene-associated glycosyltransferase HpnB. T | 99.71 | |
| cd02525 | 249 | Succinoglycan_BP_ExoA ExoA is involved in the bios | 99.63 | |
| PF13632 | 193 | Glyco_trans_2_3: Glycosyl transferase family group | 99.63 | |
| COG2943 | 736 | MdoH Membrane glycosyltransferase [Cell envelope b | 99.62 | |
| cd06436 | 191 | GlcNAc-1-P_transferase N-acetyl-glucosamine transf | 99.44 | |
| cd06438 | 183 | EpsO_like EpsO protein participates in the methano | 99.35 | |
| cd04184 | 202 | GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot | 99.3 | |
| cd04195 | 201 | GT2_AmsE_like GT2_AmsE_like is involved in exopoly | 99.22 | |
| PF14570 | 48 | zf-RING_4: RING/Ubox like zinc-binding domain; PDB | 99.15 | |
| PF13506 | 175 | Glyco_transf_21: Glycosyl transferase family 21 | 99.11 | |
| cd06433 | 202 | GT_2_WfgS_like WfgS and WfeV are involved in O-ant | 99.09 | |
| cd02522 | 221 | GT_2_like_a GT_2_like_a represents a glycosyltrans | 99.03 | |
| cd06420 | 182 | GT2_Chondriotin_Pol_N N-terminal domain of Chondro | 98.99 | |
| cd02510 | 299 | pp-GalNAc-T pp-GalNAc-T initiates the formation of | 98.98 | |
| cd04196 | 214 | GT_2_like_d Subfamily of Glycosyltransferase Famil | 98.97 | |
| cd04186 | 166 | GT_2_like_c Subfamily of Glycosyltransferase Famil | 98.92 | |
| PF03142 | 527 | Chitin_synth_2: Chitin synthase; InterPro: IPR0048 | 98.89 | |
| PLN02726 | 243 | dolichyl-phosphate beta-D-mannosyltransferase | 98.87 | |
| cd04185 | 202 | GT_2_like_b Subfamily of Glycosyltransferase Famil | 98.86 | |
| cd02526 | 237 | GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr | 98.85 | |
| cd06913 | 219 | beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran | 98.85 | |
| PF00535 | 169 | Glycos_transf_2: Glycosyl transferase family 2; In | 98.82 | |
| cd06442 | 224 | DPM1_like DPM1_like represents putative enzymes si | 98.76 | |
| cd06423 | 180 | CESA_like CESA_like is the cellulose synthase supe | 98.71 | |
| cd04188 | 211 | DPG_synthase DPG_synthase is involved in protein N | 98.52 | |
| cd04179 | 185 | DPM_DPG-synthase_like DPM_DPG-synthase_like is a m | 98.51 | |
| PRK10073 | 328 | putative glycosyl transferase; Provisional | 98.42 | |
| PRK10018 | 279 | putative glycosyl transferase; Provisional | 98.42 | |
| TIGR01556 | 281 | rhamnosyltran L-rhamnosyltransferase. Rhamnolipids | 98.4 | |
| PRK10063 | 248 | putative glycosyl transferase; Provisional | 98.28 | |
| cd04187 | 181 | DPM1_like_bac Bacterial DPM1_like enzymes are rela | 98.27 | |
| cd00761 | 156 | Glyco_tranf_GTA_type Glycosyltransferase family A | 98.16 | |
| KOG2571 | 862 | consensus Chitin synthase/hyaluronan synthase (gly | 98.16 | |
| PTZ00260 | 333 | dolichyl-phosphate beta-glucosyltransferase; Provi | 98.12 | |
| PF10111 | 281 | Glyco_tranf_2_2: Glycosyltransferase like family 2 | 98.06 | |
| PRK13915 | 306 | putative glucosyl-3-phosphoglycerate synthase; Pro | 97.92 | |
| COG1216 | 305 | Predicted glycosyltransferases [General function p | 97.91 | |
| PRK10714 | 325 | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi | 97.21 | |
| KOG2547 | 431 | consensus Ceramide glucosyltransferase [Lipid tran | 96.98 | |
| COG0463 | 291 | WcaA Glycosyltransferases involved in cell wall bi | 96.85 | |
| COG5175 | 480 | MOT2 Transcriptional repressor [Transcription] | 96.69 | |
| cd02511 | 229 | Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 | 96.44 | |
| PF14446 | 54 | Prok-RING_1: Prokaryotic RING finger family 1 | 95.53 | |
| TIGR00570 | 309 | cdk7 CDK-activating kinase assembly factor MAT1. A | 95.3 | |
| cd02514 | 334 | GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es | 94.35 | |
| PF02364 | 817 | Glucan_synthase: 1,3-beta-glucan synthase componen | 90.77 | |
| PF05290 | 140 | Baculo_IE-1: Baculovirus immediate-early protein ( | 89.33 | |
| cd00162 | 45 | RING RING-finger (Really Interesting New Gene) dom | 87.86 | |
| smart00504 | 63 | Ubox Modified RING finger domain. Modified RING fi | 82.27 |
| >PLN02400 cellulose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-314 Score=2781.25 Aligned_cols=1026 Identities=68% Similarity=1.245 Sum_probs=940.7
Q ss_pred CCCccccccccCCceEEEeccCCC--CCCCCCCCCCcccccCCcccccCCCCeeecccCCCCccchhhhhhhhhcCCCCC
Q 001576 4 NPMGSFVAGSHSRNELHVMHANEE--RPPTRQSGSKLCRVCGDEIGLKENGELFVACHECGFPVCRPCYEYERSEGSQCC 81 (1050)
Q Consensus 4 ~~~~~~~~g~~~r~~~~~~~~~~~--~~~~~~~~~~~CqiCgd~vg~~~~G~~fvaC~eC~FpVCR~CyeyerkeG~~~C 81 (1050)
|+++|||||||||||||+|++|++ +||++++++|+||||||+||+|+|||+|||||||+|||||||||||||||||+|
T Consensus 2 ~~~~glvaGSh~Rnelv~i~~d~~~g~kp~~~~~gqiCqICGD~VG~t~dGe~FVAC~eCaFPVCRpCYEYERkeGnq~C 81 (1085)
T PLN02400 2 EANAGMVAGSYRRNELVRIRHDSDSGPKPLKNLNGQICQICGDDVGVTETGDVFVACNECAFPVCRPCYEYERKDGTQCC 81 (1085)
T ss_pred CCccccccccccccceeeecccccccCCCccccCCceeeecccccCcCCCCCEEEEEccCCCccccchhheecccCCccC
Confidence 689999999999999999998854 589999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccccCccccCCCCCCCCCccchhhhccCCCCCCCCccccccccCCCC-----CC-CCCCcccCCCC-------
Q 001576 82 PGCNTRYKRHKGCARVAGDEEDNFDDDFEDEFKNHYDNQDHDQHHHVTTTRSEN-----GD-NNQNQFLNGPG------- 148 (1050)
Q Consensus 82 PqCkt~Ykr~kgsprv~gd~ee~~~dd~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~------- 148 (1050)
||||||||||||||||+|||||||+||+||||++++.|++..++ +. +++.+ ++ ++++|++++++
T Consensus 82 PQCkTrYkR~KgsprV~GDeeedd~DDlenEf~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~p~lt~g~~~s~ei~ 158 (1085)
T PLN02400 82 PQCKTRYRRHKGSPRVEGDEDEDDVDDLENEFNYAQGNGKARHQ--WQ-GEDIELSSSSRHESQPIPLLTHGQPVSGEIP 158 (1085)
T ss_pred cccCCccccccCCCCCCcccccccchhhhhhhcccccccccccc--cc-ccCccccCcccccCCCCccccCCcccCCCCC
Confidence 99999999999999999999999999999999997554432111 11 11111 00 24566776643
Q ss_pred -----Cc-ccCCC------C-----------------CcccCCCC----CCcchhhhHhHHHHHHHhhhccc-ccc-C--
Q 001576 149 -----SF-AGSVA------G-----------------KDFEGDKE----GYSSAEWQERVEKWKIRQEKRGL-VTK-D-- 191 (1050)
Q Consensus 149 -----~~-~~~~~------~-----------------~~~~~~~~----~~g~~~w~~~~~~wk~~~~~~~~-~~~-~-- 191 (1050)
+| +.++. + ..+|++|| |||||+||||||+||+||+|++. +.+ .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~vh~~p~~d~~~~~~~~~~d~~~~~~~~g~g~~~wkerv~~wk~~~~k~~~~~~~~~~~ 238 (1085)
T PLN02400 159 CATPDNQSVRTTSGPLGPAERNANSSPYIDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQDKNMMQMTNKYHE 238 (1085)
T ss_pred CCCCccccccCCcccccccCCcccccCccCcccCCCccccCccccccccccCcHHHHHHHHHHHhhhhhhcccccccccc
Confidence 11 11110 1 13889999 99999999999999999965433 222 1
Q ss_pred C--CC--CCCCCCCchhhhhhhcCCCeeEeecCCCCcchhHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHH
Q 001576 192 D--GG--NDQGDGDDDFLMAEARQPLWRKVPIPSSKINPYRIVIILRLFILAFFLRFRILTPAYDAFPLWIISVICEVWF 267 (1050)
Q Consensus 192 ~--~~--~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~yR~~~~~~l~~l~~yl~~Ri~~~~~~~~~lw~~~~~~Ei~f 267 (1050)
| ++ +++.+++|.++|++.++||+||+++++++|+|||++++++|+++++||+||++|++.+++|+|+++++||+||
T Consensus 239 ~~~g~~~~~~~~~~d~~~~~~~~~pL~~~~~i~~~~~~~yR~~~~~~lv~l~~~l~yRi~~~~~~~~~~Wl~s~~cE~wF 318 (1085)
T PLN02400 239 GKGGDMEGTGSNGDELQMADDARLPMSRVVPIPSSRLTPYRIVIILRLIILGFFLQYRVTHPVKDAYGLWLTSVICEIWF 318 (1085)
T ss_pred ccccCCCCCCCCcccccccccccCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCcccHHHHHHHHHHHHHH
Confidence 1 11 1123356888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccccccccchhhhhhhhhhcCCCCCCCCCeeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcC
Q 001576 268 AFSWILDQFPKWFPITRETYLDRLSIRFEREGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSILSMDYPVDKVSCYVSD 347 (1050)
Q Consensus 268 ~~~wil~q~~kw~Pv~R~t~~drL~~r~~~~~~~~~lp~VDvfV~T~dp~kEpp~v~~nTvls~la~dYP~~kl~~yvsD 347 (1050)
+|+|+|+|++||+||+|+||+|||++||++++++++||+|||||||+||.||||++|+||||||||+|||+|||+|||||
T Consensus 319 af~Wll~q~~Kw~Pv~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSD 398 (1085)
T PLN02400 319 ALSWLLDQFPKWYPINRETYLDRLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSD 398 (1085)
T ss_pred HHHHHHccCcccccccceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEec
Confidence 99999999999999999999999999999988899999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhHhhHHHHHHhhhhhhhhhhccCCCCCcccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 001576 348 DGASMLLFDALSETAEFARRWVPFCKKYIIEPRAPEFYFSQKIDYLKDKVQPTFVKDRRAMKREYEEFKVRINALVSKAQ 427 (1050)
Q Consensus 348 DG~~~ltf~al~E~a~fA~~WvPFCkk~~iepR~Pe~yFs~k~d~~~~~~~~~f~~err~mkreYee~k~ri~~l~~k~~ 427 (1050)
||+|+||||||.|||+|||+||||||||+|||||||+||++|.|+++++.+|+|++|||+|||||||||+|||+|+++++
T Consensus 399 DGgS~LTf~Al~Eaa~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~~~ 478 (1085)
T PLN02400 399 DGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQ 478 (1085)
T ss_pred CCchHHHHHHHHHHHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccccCCCCCCCCCCCCChhhHHhhhcCCCCccccCCCCCcEEEEeccCCCCCCCCCccchhhHHHHhhccCCCC
Q 001576 428 KKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNA 507 (1050)
Q Consensus 428 ~vp~e~w~m~dgt~w~g~~~~dhp~iiqv~l~~~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvSav~tng 507 (1050)
++|+++|+|+|||+|||++++|||+|||||++++|+.|.+|++||+||||||||||||+||+||||||+|+||||+||||
T Consensus 479 ~~~~~~~~m~dgt~W~g~~~~dHp~iIqVll~~~~~~d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNa 558 (1085)
T PLN02400 479 KIPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNG 558 (1085)
T ss_pred cCCccccccccCccCCCCCCCCCchhhhhhhcCCCCcccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEecCCCCCChHHHHHHHhhhhcCcCCCccEEEEecCccccCCCCCCcccchhhHHHHhhcccccCCCCceeeccCc
Q 001576 508 PFILNLDCDHYLNNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNIVFFDINMLGLDGIQGPVYVGTGC 587 (1050)
Q Consensus 508 p~il~lDcD~~~~~~~~Lr~amcf~~Dp~~g~~v~~VQ~PQ~F~~id~~D~y~n~~~vFfdi~~~glDg~qgp~yvGTGc 587 (1050)
|||||||||||+|||+++|+||||||||+.|+++|||||||+|+|+|++|||+|+|+||||++|+|+||+|||+||||||
T Consensus 559 P~ILNlDCDmY~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~~~GldGlqGP~YvGTGC 638 (1085)
T PLN02400 559 AYLLNVDCDHYFNNSKALKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGC 638 (1085)
T ss_pred ceEEecccccccCCchhHHhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeeccccccccCCCccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eehhhhhcCCCCCCCCCCCCCCCCCCCCCCcccCCCCccccccccCCCCcccccchhhhhhccccccccCCCCCccchhH
Q 001576 588 VFNRQALYGYDPPVSEKRPKMTCDCWPSWCCCCCGGSRKSKSKKKGDKRGFFSGLYTKKKKMMGKNYVRKGSAPVFDLEE 667 (1050)
Q Consensus 588 ~fRR~ALyg~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (1050)
+|||+||||++||..++...... .||+||++|+++|+.+.... +.++..+ ..+++.+++++++
T Consensus 639 ~frR~aLYG~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~---------~~~~~~~---~~~~~~~~~~~~~ 701 (1085)
T PLN02400 639 CFNRQALYGYDPVLTEEDLEPNI-----IVKSCCGSRKKGKGSKKYNI---------DKKRAMK---RTESNVPIFNMED 701 (1085)
T ss_pred ceeeeeeccCCCccccccccccc-----cccccccccccccccccccc---------ccccccc---ccccccccccccc
Confidence 99999999999986543211111 13557777766443221100 1111111 1456778999999
Q ss_pred hhhhccchhhhhhhhhhhhhhhhhhcCCchHHHhhhhhhcCCCCCCCCchhHHHHHHHhhccccccccccccccceeccc
Q 001576 668 IEEGLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLKEDGGLPEGTNSTSLIKEAIHVISCGYEEKTEWGKEIGWIYGS 747 (1050)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~sal~e~GG~~~~~~~~~~~~eA~~v~sc~YE~~T~WG~evGw~ygs 747 (1050)
+++|++++|+ +++.++++++++++||+|.+|++|++++.||.+...+++++++||+|||||+||++|+||+||||+|||
T Consensus 702 ~~~~~~~~~~-~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~~~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGS 780 (1085)
T PLN02400 702 IEEGVEGYDD-ERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGS 780 (1085)
T ss_pred cccccccccc-hhhhhhhhhhhhhhccccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhhccCCccCCchhhhhCeeccc
Confidence 9999999887 788899999999999999999999999999999989999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHhCCcEEEEecCCCccccccCCCCHHHHHHHhHhhhchhHHHHHhhccccccccCCCCCcccchhhhhh
Q 001576 748 ITEDILTGFKMHCRGWKSVYCVPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKWLERLAYTNT 827 (1050)
Q Consensus 748 ITED~~Tg~rLh~~GWrsvY~~p~~~af~G~aP~tl~~~l~QR~RWA~G~lQil~~k~~Pl~~g~~~~Ls~~QRL~Yl~~ 827 (1050)
+|||+.||++||++||||+|++|++++|.|+||+|+.++++||+|||+|++||+++++||+++|+.++|+++|||+|+++
T Consensus 781 vTED~~TG~~LH~rGWrSvY~~p~r~af~GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~~ 860 (1085)
T PLN02400 781 VTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINT 860 (1085)
T ss_pred eechHHHHHHHHccCCceEecCCCcHhhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999887789999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHhCCcchhccchHHHHHHHHHHHHHHHHHHhheeecCcccccccccchhHHHHHHHHHH
Q 001576 828 IVYPFTSIPLLAYCTLPAICLLTGKFIIPTLNNLASIWFLALFLSIIVTGVLELRWSGVSIEDWWRNEQFWVIGGVSAHL 907 (1050)
Q Consensus 828 ~ly~l~sl~~liylllP~l~Ll~G~~iip~vs~~~~~~fi~lfls~~~~~lLe~rwsG~s~~~wWr~e~~W~I~~vsa~l 907 (1050)
++||++++++++|+++|++||++|++++|.++++++++|+++|++++++++||++|+|+++++||||||||+|+++|++|
T Consensus 861 ~~y~~~slp~liY~llP~l~LltG~~i~P~vs~~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~~Sa~L 940 (1085)
T PLN02400 861 IVYPITSIPLLAYCVLPAFCLITNKFIIPEISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHL 940 (1085)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccCCccchHHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCeeeCcCCCcc-ccccceeeeccccchhHHHHHHHHHHHHHHHHHHHhHhcCCCCCcchHHHHH
Q 001576 908 FAVFQGLLKVLAGVDTNFTVTSKSAED-EEFGELYLFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLF 986 (1050)
Q Consensus 908 fAv~~aLlk~L~g~~~~F~VTpKg~~~-~~~~~ly~f~ws~l~iP~~~Llilnlvaiv~Gi~r~i~~~~~~w~~l~~~l~ 986 (1050)
||++++++|+|++++++|.||+|..++ +.++++|+|+||++++|+++++++|++|+++|++++++++++.|+++++++|
T Consensus 941 favl~~ilKvLgg~~~~F~VTsK~~d~~~~~~ely~f~~s~L~iP~ttl~llNlvaiv~Gv~~~i~~g~~~~g~l~~~~~ 1020 (1085)
T PLN02400 941 FAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTVLLVNLVGIVAGVSYAINSGYQSWGPLFGKLF 1020 (1085)
T ss_pred HHHHHHHHHHhcCCcccceecCCcccccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHH
Confidence 999999999999999999999998764 3578999999999999999999999999999999999988889999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHhhheeecCCCCCCCCC-cccccCCCC
Q 001576 987 FAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSVLLASIFSLLWVRIDPFLPKQKGP-LLKQCGVEC 1050 (1050)
Q Consensus 987 ~~~Wvlvnl~PflkgL~gR~~~~P~~v~~~s~lla~~~~~l~v~i~~~~~~~~~~-~~~~~~~~~ 1050 (1050)
+++|+++|+|||+||||||++|+|+||++||++||++||||||+|+||+++++|| ++++|||+|
T Consensus 1021 ~~~wvvv~l~Pf~kgL~gR~~r~P~~v~~~s~lla~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~ 1085 (1085)
T PLN02400 1021 FAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDPFVSDTTKAAANGQCGVNC 1085 (1085)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHHHHHHHheeccccccCCCCchhHhhcCcCC
Confidence 9999999999999999999999999999999999999999999999999999999 899999999
|
|
| >PLN02436 cellulose synthase A | Back alignment and domain information |
|---|
| >PLN02915 cellulose synthase A [UDP-forming], catalytic subunit | Back alignment and domain information |
|---|
| >PLN02638 cellulose synthase A (UDP-forming), catalytic subunit | Back alignment and domain information |
|---|
| >PLN02189 cellulose synthase | Back alignment and domain information |
|---|
| >PLN02195 cellulose synthase A | Back alignment and domain information |
|---|
| >PLN02248 cellulose synthase-like protein | Back alignment and domain information |
|---|
| >PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals | Back alignment and domain information |
|---|
| >PLN02190 cellulose synthase-like protein | Back alignment and domain information |
|---|
| >PLN02893 Cellulose synthase-like protein | Back alignment and domain information |
|---|
| >TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >PRK11498 bcsA cellulose synthase catalytic subunit; Provisional | Back alignment and domain information |
|---|
| >PF14569 zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A | Back alignment and domain information |
|---|
| >PRK05454 glucosyltransferase MdoH; Provisional | Back alignment and domain information |
|---|
| >cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan | Back alignment and domain information |
|---|
| >COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PRK14583 hmsR N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 | Back alignment and domain information |
|---|
| >PRK11204 N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK14716 bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
| >cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
| >cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex | Back alignment and domain information |
|---|
| >cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily | Back alignment and domain information |
|---|
| >cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase | Back alignment and domain information |
|---|
| >PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A | Back alignment and domain information |
|---|
| >PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
| >TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI | Back alignment and domain information |
|---|
| >cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin | Back alignment and domain information |
|---|
| >cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis | Back alignment and domain information |
|---|
| >cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan | Back alignment and domain information |
|---|
| >cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily | Back alignment and domain information |
|---|
| >TIGR03469 HonB hopene-associated glycosyltransferase HpnB | Back alignment and domain information |
|---|
| >cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan | Back alignment and domain information |
|---|
| >PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 | Back alignment and domain information |
|---|
| >COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine | Back alignment and domain information |
|---|
| >cd06438 EpsO_like EpsO protein participates in the methanolan synthesis | Back alignment and domain information |
|---|
| >cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis | Back alignment and domain information |
|---|
| >cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis | Back alignment and domain information |
|---|
| >PF14570 zf-RING_4: RING/Ubox like zinc-binding domain; PDB: 1E4U_A 1UR6_B | Back alignment and domain information |
|---|
| >PF13506 Glyco_transf_21: Glycosyl transferase family 21 | Back alignment and domain information |
|---|
| >cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis | Back alignment and domain information |
|---|
| >cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function | Back alignment and domain information |
|---|
| >cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase | Back alignment and domain information |
|---|
| >cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans | Back alignment and domain information |
|---|
| >cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 | Back alignment and domain information |
|---|
| >PLN02726 dolichyl-phosphate beta-D-mannosyltransferase | Back alignment and domain information |
|---|
| >cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase | Back alignment and domain information |
|---|
| >cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine | Back alignment and domain information |
|---|
| >PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 | Back alignment and domain information |
|---|
| >cd06423 CESA_like CESA_like is the cellulose synthase superfamily | Back alignment and domain information |
|---|
| >cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation | Back alignment and domain information |
|---|
| >cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily | Back alignment and domain information |
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| >PRK10073 putative glycosyl transferase; Provisional | Back alignment and domain information |
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| >PRK10018 putative glycosyl transferase; Provisional | Back alignment and domain information |
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| >TIGR01556 rhamnosyltran L-rhamnosyltransferase | Back alignment and domain information |
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| >PRK10063 putative glycosyl transferase; Provisional | Back alignment and domain information |
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| >cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 | Back alignment and domain information |
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| >cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold | Back alignment and domain information |
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| >KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
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| >PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional | Back alignment and domain information |
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| >PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] | Back alignment and domain information |
|---|
| >PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional | Back alignment and domain information |
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| >COG1216 Predicted glycosyltransferases [General function prediction only] | Back alignment and domain information |
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| >PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional | Back alignment and domain information |
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| >KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
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| >COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
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| >COG5175 MOT2 Transcriptional repressor [Transcription] | Back alignment and domain information |
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| >cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide | Back alignment and domain information |
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| >PF14446 Prok-RING_1: Prokaryotic RING finger family 1 | Back alignment and domain information |
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| >TIGR00570 cdk7 CDK-activating kinase assembly factor MAT1 | Back alignment and domain information |
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| >cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides | Back alignment and domain information |
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| >PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >PF05290 Baculo_IE-1: Baculovirus immediate-early protein (IE-0); InterPro: IPR007954 This entry contains the Baculovirus immediate-early protein IE-0 | Back alignment and domain information |
|---|
| >cd00162 RING RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in mediating protein-protein interactions; identified in a proteins with a wide range of functions such as viral replication, signal transduction, and development; has two variants, the C3HC4-type and a C3H2C3-type (RING-H2 finger), which have different cysteine/histidine pattern; a subset of RINGs are associated with B-Boxes (C-X2-H-X7-C-X7-C-X2-C-H-X2-H) | Back alignment and domain information |
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| >smart00504 Ubox Modified RING finger domain | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1050 | ||||
| 1weo_A | 93 | Solution Structure Of Ring-Finger In The Catalytic | 4e-19 | ||
| 4hg6_A | 802 | Structure Of A Cellulose Synthase - Cellulose Trans | 6e-07 |
| >pdb|1WEO|A Chain A, Solution Structure Of Ring-Finger In The Catalytic Subunit (Irx3) Of Cellulose Synthase Length = 93 | Back alignment and structure |
|
| >pdb|4HG6|A Chain A, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate Length = 802 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1 Length = 93 | Back alignment and structure |
|---|
Score = 141 bits (355), Expect = 1e-39
Identities = 46/83 (55%), Positives = 56/83 (67%)
Query: 26 EERPPTRQSGSKLCRVCGDEIGLKENGELFVACHECGFPVCRPCYEYERSEGSQCCPGCN 85
P + + C +CGD+IGL G+LFVAC+ECGFP CRPCYEYER EG+Q CP C
Sbjct: 6 SGPKPLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCK 65
Query: 86 TRYKRHKGCARVAGDEEDNFDDD 108
TRYKR +G RV GDE++ D
Sbjct: 66 TRYKRLRGSPRVEGDEDEEDIDS 88
|
| >1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B Length = 78 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1050 | ||||
| d1weoa_ | 93 | g.44.1.1 (A:) Cellulose synthase A catalytic subun | 1e-42 | |
| d1g25a_ | 65 | g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapi | 0.001 |
| >d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 93 | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: RING finger domain, C3HC4 domain: Cellulose synthase A catalytic subunit 7, IRX3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 148 bits (374), Expect = 1e-42
Identities = 46/83 (55%), Positives = 56/83 (67%)
Query: 26 EERPPTRQSGSKLCRVCGDEIGLKENGELFVACHECGFPVCRPCYEYERSEGSQCCPGCN 85
P + + C +CGD+IGL G+LFVAC+ECGFP CRPCYEYER EG+Q CP C
Sbjct: 6 SGPKPLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCK 65
Query: 86 TRYKRHKGCARVAGDEEDNFDDD 108
TRYKR +G RV GDE++ D
Sbjct: 66 TRYKRLRGSPRVEGDEDEEDIDS 88
|
| >d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]} Length = 65 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1050 | |||
| d1weoa_ | 93 | Cellulose synthase A catalytic subunit 7, IRX3 {Th | 100.0 | |
| d1xhba2 | 328 | Polypeptide N-acetylgalactosaminyltransferase 1, N | 99.5 | |
| d1qg8a_ | 255 | Spore coat polysaccharide biosynthesis protein Sps | 98.95 | |
| d1omza_ | 265 | Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga | 98.54 | |
| d1ur6b_ | 52 | Not-4 N-terminal RING finger domain {Human (Homo s | 94.65 | |
| d1g25a_ | 65 | TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9 | 94.62 | |
| d2bo4a1 | 381 | Mannosylglycerate synthase, MGS {Rhodothermus mari | 94.25 | |
| d1vyxa_ | 60 | IE1B protein (ORF K3), N-terminal domain {Kaposi's | 91.3 | |
| d1chca_ | 68 | Immediate early protein, IEEHV {Equine herpesvirus | 87.83 |
| >d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: RING finger domain, C3HC4 domain: Cellulose synthase A catalytic subunit 7, IRX3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=3.5e-40 Score=291.23 Aligned_cols=84 Identities=55% Similarity=1.194 Sum_probs=80.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89999888779875554487643457998021046889861201156466218987888852222446865447997777
Q 001576 25 NEERPPTRQSGSKLCRVCGDEIGLKENGELFVACHECGFPVCRPCYEYERSEGSQCCPGCNTRYKRHKGCARVAGDEEDN 104 (1050)
Q Consensus 25 ~~~~~~~~~~~~~~CqiCgd~vg~~~~G~~fvaC~eC~FpVCR~CyeyerkeG~~~CPqCkt~Ykr~kgsprv~gd~ee~ 104 (1050)
+..+||++++++|+||||||+||+++|||+|||||||+|||||||||||||||+|+|||||||||||||||||+||++|+
T Consensus 5 ~~g~kp~~~~~~q~CqiCGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCkt~Ykr~kgsprv~gDe~e~ 84 (93)
T d1weoa_ 5 SSGPKPLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKRLRGSPRVEGDEDEE 84 (93)
T ss_dssp SSSSSCCSCCSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCCCCTTCCCCTTSCCCC
T ss_pred CCCCCCHHHCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCC
T ss_conf 77997734515522011546324178998888752369864507899998516702744487245525898777871001
Q ss_pred CCCC
Q ss_conf 8752
Q 001576 105 FDDD 108 (1050)
Q Consensus 105 ~~dd 108 (1050)
++||
T Consensus 85 ~~d~ 88 (93)
T d1weoa_ 85 DIDS 88 (93)
T ss_dssp CSCC
T ss_pred CCCC
T ss_conf 4346
|
| >d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} | Back information, alignment and structure |
|---|
| >d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]} | Back information, alignment and structure |
|---|
| >d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]} | Back information, alignment and structure |
|---|