Citrus Sinensis ID: 001581
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1050 | 2.2.26 [Sep-21-2011] | |||||||
| Q8CG46 | 1101 | Structural maintenance of | yes | no | 0.946 | 0.902 | 0.309 | 1e-134 | |
| Q8IY18 | 1101 | Structural maintenance of | yes | no | 0.946 | 0.902 | 0.311 | 1e-130 | |
| Q802R9 | 1092 | Structural maintenance of | N/A | no | 0.932 | 0.896 | 0.318 | 1e-125 | |
| Q5ZJY5 | 1065 | Structural maintenance of | yes | no | 0.935 | 0.922 | 0.300 | 1e-121 | |
| Q805A1 | 1065 | Structural maintenance of | N/A | no | 0.934 | 0.921 | 0.290 | 1e-117 | |
| O13710 | 1076 | Structural maintenance of | yes | no | 0.935 | 0.912 | 0.276 | 2e-83 | |
| Q08204 | 1093 | Structural maintenance of | yes | no | 0.923 | 0.887 | 0.263 | 2e-67 | |
| Q924W5 | 1097 | Structural maintenance of | no | no | 0.886 | 0.848 | 0.226 | 5e-24 | |
| Q6P9I7 | 1128 | Structural maintenance of | N/A | no | 0.202 | 0.188 | 0.281 | 1e-14 | |
| Q802R8 | 1090 | Structural maintenance of | N/A | no | 0.249 | 0.240 | 0.268 | 5e-13 |
| >sp|Q8CG46|SMC5_MOUSE Structural maintenance of chromosomes protein 5 OS=Mus musculus GN=Smc5 PE=2 SV=1 | Back alignment and function desciption |
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Score = 479 bits (1232), Expect = e-134, Method: Compositional matrix adjust.
Identities = 332/1073 (30%), Positives = 569/1073 (53%), Gaps = 79/1073 (7%)
Query: 11 VSRGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGD 70
+ R ++ G+I+ I + NF+T+D PG LN++IG NG+GKSS+VCAI L L G
Sbjct: 41 LPRPSGTFVEGSIVRIAMENFLTYDICEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGK 100
Query: 71 TQLLGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPK 129
+GRA +G +VKRG G ++I L + +L I R+ID +N+S WF N K V +
Sbjct: 101 PAFMGRADKVGFFVKRGCSKGLVEIELFRTSG--NLIITREIDVIKNQSFWFINKKPVTQ 158
Query: 130 GEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEK 189
V E NIQV NL QFLPQD+V EFAKLS ++LLE TEK+VG P++ HC L
Sbjct: 159 KIVEEQVAALNIQVGNLCQFLPQDKVGEFAKLSKIELLEATEKSVGPPEMHRYHCELKNF 218
Query: 190 SSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMK 249
K K +E + K + L ++ N ++DVER +R L+ +E ++ K PW++Y+
Sbjct: 219 REKEKQLETSCKEKTEYLEKMVQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYENV 278
Query: 250 KAEYIAAK---EQEKDAKKKLDEAANTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS 306
+ EY K ++ K+ +KL E + ++ IE +++ L+ K+ S+ I E S
Sbjct: 279 RQEYEGVKLIRDRVKEEVRKLKEGQIPM---TRRIEEIDRQRHTLEVRIKEKSTDIKEAS 335
Query: 307 ---KRRMDFLEKVDQGVQVQGKYKEMQEL----RRQEQSRQQRILKAREELAAAELDLQT 359
K+R D +E+ D+ + KE+Q+ + +E RQ+RI R+ + + +L+T
Sbjct: 336 QKCKQRQDLIERKDRQI------KELQQALTVKQNEELDRQKRISNTRKMIEDLQSELKT 389
Query: 360 VPAYE---PPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKD-M 415
E P D + ++ E + + K ++++L + + ++ R + M
Sbjct: 390 AENCENLQPQIDTVTNDLRRVQEEKALCEGEIIDKQREKEMLEKQRRSVSDHITRFDNLM 449
Query: 416 EDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHV 475
K +KL R++ ++A WL+ +R + P++L +N+ + +A Y+E+H+
Sbjct: 450 NQKEDKLRQRYRDT-----YDAVLWLRNNRDRFKQRVCEPIMLTINMKDNKNAKYVENHI 504
Query: 476 GHYIWKSFITQDAGDRDFLAKNLK--------PFDVPILNYVSNESSRKEPFQISEEMRA 527
++F+ + D + + ++ P ++Y K P + +++
Sbjct: 505 SSNDLRAFVFESQEDMEIFLREVRDNKKLRVNAVIAPKISYAD-----KAPSRSLNDLKQ 559
Query: 528 LGISARLDQVFDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAKLGIL-DFWTPENHY 586
G + L ++FDAP V L Q+ + +G++ T ++ + V + L +T E Y
Sbjct: 560 YGFFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTERTRERIERVIQETRLKQIYTAEEKY 619
Query: 587 RWSISRYGGHVSASVEPVNQSRLLLCSVDGNEIERLRSKKKKLEESVDELEESLKSMQTE 646
S Y V +S + ++ L +VD + L + K++ ++ ++ L +++
Sbjct: 620 VLKTSVYSNKVISSNTSLKVAQFLTVTVDLEQRRHLEEQLKEMNRQLEAVDSGLAALRDT 679
Query: 647 QRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHI---------------NLRKRKLES 691
R +E + +L+ +++E++ K ++R++E I NL + + ++
Sbjct: 680 NRHLELKDNELRLKKKELLE----RKTRKRQLEQKISSKLASIRLMEQDTCNLEEEERKA 735
Query: 692 IEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKI 751
K +IN AKLV + L + I+ +L+++ + +EK+ ++ A
Sbjct: 736 STKIKEINVQKAKLVTELTGLVKICTSFQIQKVDLILQNTTV---ISEKNKLEADYMASS 792
Query: 752 RELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT--PELEK---- 805
+L +Q +L + CK+ ++ R+ + + QA F T P +
Sbjct: 793 SQLRVTEQQFIELDDNRQRLLQKCKELMKKARQVCNLSADQAVPQEFQTQVPTIPNGHSS 852
Query: 806 ----EFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 861
F ++P T++E++A + + S+A+ LN ++++EY R+ +I+ L+ + + K
Sbjct: 853 SPPMAFQDLPNTLDEIDALLTEERSRASCFTGLNPSVVEEYSKREVEIQQLTEELQGKKV 912
Query: 862 ELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSL-DEHESDFDKFGIL 920
EL + I +KE+WL L+ LV +INE FS F M AGEV L E+E D+DK+GI
Sbjct: 913 ELDEYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGEVDLHTENEEDYDKYGIR 972
Query: 921 IKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERK 980
I+VKFR S QL L+ HHQSGGERSVST+LYL++LQ+L CPFRVVDEINQGMDPINER+
Sbjct: 973 IRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPINERR 1032
Query: 981 MFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWS 1033
+F+ +V A + NT Q F +TPKLL +L YSE ++L + NGP + +P++ W+
Sbjct: 1033 VFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGPHMLEPNR-WN 1084
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Core component of the SMC5-SMC6 complex, a complex involved in repair of DNA double-strand breaks by homologous recombination. The complex may promote sister chromatid homologous recombination by recruiting the SMC1-SMC3 cohesin complex to double-strand breaks. The complex is required for telomere maintenance via recombination and mediates sumoylation of shelterin complex (telosome) components. Required for sister chromatid cohesion during prometaphase and mitotic progression; the function seems to be independent of SMC6. Mus musculus (taxid: 10090) |
| >sp|Q8IY18|SMC5_HUMAN Structural maintenance of chromosomes protein 5 OS=Homo sapiens GN=SMC5 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q802R9|SMC5_TAKRU Structural maintenance of chromosomes protein 5 OS=Takifugu rubripes GN=smc5 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q5ZJY5|SMC5_CHICK Structural maintenance of chromosomes protein 5 OS=Gallus gallus GN=SMC5 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q805A1|SMC5_XENLA Structural maintenance of chromosomes protein 5 OS=Xenopus laevis GN=smc5 PE=2 SV=1 | Back alignment and function description |
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| >sp|O13710|SMC5_SCHPO Structural maintenance of chromosomes protein 5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=smc5 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q08204|SMC5_YEAST Structural maintenance of chromosomes protein 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SMC5 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q924W5|SMC6_MOUSE Structural maintenance of chromosomes protein 6 OS=Mus musculus GN=Smc6 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q6P9I7|SMC6_XENLA Structural maintenance of chromosomes protein 6 OS=Xenopus laevis GN=smc6 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q802R8|SMC6_TAKRU Structural maintenance of chromosomes protein 6 OS=Takifugu rubripes GN=smc6 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1050 | ||||||
| 225450013 | 1051 | PREDICTED: structural maintenance of chr | 0.996 | 0.995 | 0.779 | 0.0 | |
| 255553458 | 1057 | structural maintenance of chromosomes 5 | 0.992 | 0.985 | 0.753 | 0.0 | |
| 449436331 | 1053 | PREDICTED: structural maintenance of chr | 0.996 | 0.993 | 0.744 | 0.0 | |
| 449488823 | 1053 | PREDICTED: LOW QUALITY PROTEIN: structur | 0.996 | 0.993 | 0.741 | 0.0 | |
| 297807615 | 1052 | structural maintenance of chromosomes fa | 0.996 | 0.994 | 0.696 | 0.0 | |
| 15237219 | 1053 | structural maintenance of chromosomes 5 | 0.987 | 0.984 | 0.703 | 0.0 | |
| 356576425 | 1059 | PREDICTED: structural maintenance of chr | 0.994 | 0.985 | 0.660 | 0.0 | |
| 357132304 | 1058 | PREDICTED: structural maintenance of chr | 0.984 | 0.977 | 0.608 | 0.0 | |
| 115465843 | 1065 | Os05g0596600 [Oryza sativa Japonica Grou | 0.984 | 0.970 | 0.612 | 0.0 | |
| 222632791 | 1103 | hypothetical protein OsJ_19783 [Oryza sa | 0.982 | 0.935 | 0.612 | 0.0 |
| >gi|225450013|ref|XP_002272410.1| PREDICTED: structural maintenance of chromosomes protein 5 [Vitis vinifera] gi|297736324|emb|CBI24962.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 1684 bits (4361), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 816/1047 (77%), Positives = 924/1047 (88%), Gaps = 1/1047 (0%)
Query: 5 RVKRLKVSRGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIA 64
R KR K++RGEDDY+PGNI EIELHNFMTF+ L CKPGSRLNLVIGPNGSGKSSLVCAIA
Sbjct: 5 RSKRPKITRGEDDYLPGNITEIELHNFMTFNDLKCKPGSRLNLVIGPNGSGKSSLVCAIA 64
Query: 65 LALGGDTQLLGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNG 124
L LGGD QLLGRA+SIGAYVKRGEESGYIKISLRGDT+EE +TIMRKIDTRNKSEW FNG
Sbjct: 65 LGLGGDPQLLGRASSIGAYVKRGEESGYIKISLRGDTEEEQITIMRKIDTRNKSEWLFNG 124
Query: 125 KVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHC 184
KVVPK +V+EI +RFNIQVNNLTQFLPQDRV EFAKL+PV+LLEETEKAVGDPQLPVQHC
Sbjct: 125 KVVPKKDVIEIVRRFNIQVNNLTQFLPQDRVSEFAKLTPVQLLEETEKAVGDPQLPVQHC 184
Query: 185 ALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWL 244
ALV KS +LK +E V++NG+ LN LK LN E+EKDVERVRQR ELL KVESMKKKLPWL
Sbjct: 185 ALVLKSRELKKLEKAVEQNGEMLNCLKTLNSEREKDVERVRQRQELLAKVESMKKKLPWL 244
Query: 245 KYDMKKAEYIAAKEQEKDAKKKLDEAANTLHEFSKPIEGKKQEKAILDGDCKKLSSLINE 304
KYDM+K Y+ AKEQE DAKKKLDEAA TL++ +PIE ++QEKA LD CKK+S L+N
Sbjct: 245 KYDMQKVRYMEAKEQENDAKKKLDEAAKTLNDIREPIEKQRQEKAALDAKCKKVSGLMNG 304
Query: 305 NSKRRMDFLEKVDQ-GVQVQGKYKEMQELRRQEQSRQQRILKAREELAAAELDLQTVPAY 363
NSKRRM+ LEK ++ GVQ +GKY EM+ELRRQE+SRQQRI KA+E+L AAEL+L ++P Y
Sbjct: 305 NSKRRMELLEKENRLGVQARGKYNEMEELRRQEESRQQRISKAKEDLVAAELELASLPPY 364
Query: 364 EPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 423
E P D+IE+LGSQILEL A+QKRL KSEKEK+L Q K LRQC DRLKDME+KNNKLL
Sbjct: 365 EHPKDEIERLGSQILELEFSASQKRLVKSEKEKLLGQKKGALRQCVDRLKDMENKNNKLL 424
Query: 424 HALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSF 483
AL+NSGAE IFEAY WLQ+HRHELNK+ YGPVLLEVNVS+R HA+YLE H+ +YIWKSF
Sbjct: 425 QALQNSGAEKIFEAYHWLQEHRHELNKDVYGPVLLEVNVSHRIHADYLEGHIPYYIWKSF 484
Query: 484 ITQDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHA 543
ITQD DRDFL KNL+ FDVP+LNYV NE KEPFQISEEMR LGIS+RLDQVFD+P A
Sbjct: 485 ITQDPDDRDFLVKNLRLFDVPVLNYVRNEDRHKEPFQISEEMRKLGISSRLDQVFDSPDA 544
Query: 544 VKEVLISQFGLDSSYIGSKETDQKADNVAKLGILDFWTPENHYRWSISRYGGHVSASVEP 603
VKEVL SQF L+ SYIGS+ETDQKAD V+KLGILDFWTPENHYRWS+SRYGGHVSA VEP
Sbjct: 545 VKEVLTSQFALEHSYIGSRETDQKADEVSKLGILDFWTPENHYRWSVSRYGGHVSAIVEP 604
Query: 604 VNQSRLLLCSVDGNEIERLRSKKKKLEESVDELEESLKSMQTEQRLIEDEAAKLQKEREE 663
V +SRLL+CS D EIERLRSKKK+LEE +D+LEE+ KS+Q EQRL+EDEAAKL K+REE
Sbjct: 605 VARSRLLVCSTDTGEIERLRSKKKELEEIIDDLEENFKSLQIEQRLLEDEAAKLHKQREE 664
Query: 664 IINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEI 723
IIN VQ+EKRKRREMEN ++ RKRKLES+EKEDD++T +AKL+DQAA NIQ+++ IEI
Sbjct: 665 IINTVQLEKRKRREMENRVSQRKRKLESMEKEDDLDTVMAKLIDQAAKFNIQRYQCVIEI 724
Query: 724 KNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCR 783
KNLL+E VS K ++AEKHM SIEFDAKIRELE +KQ E+ A+QASLH+E+CKKEVE R
Sbjct: 725 KNLLIESVSYKRTFAEKHMTSIEFDAKIRELEVGIKQQERFAMQASLHFENCKKEVEDHR 784
Query: 784 KHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYE 843
+ L+ AKR AESIA ITP LEK FLEMP TIE+LEAAIQD ISQANSI FLN NIL+EYE
Sbjct: 785 QQLAAAKRHAESIAVITPVLEKAFLEMPATIEDLEAAIQDTISQANSILFLNHNILEEYE 844
Query: 844 HRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAG 903
Q++IE +STK EAD+KEL+ +LAEIDALKE WL TLRNLVAQINETFSRNFQ+MAVAG
Sbjct: 845 ECQQKIEAISTKLEADEKELRMYLAEIDALKENWLTTLRNLVAQINETFSRNFQDMAVAG 904
Query: 904 EVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPF 963
EVSLDEH+ DFD+FGILIKVKFRQ+G+L+VLSAHHQSGGERSV+TILYLVSLQDLTNCPF
Sbjct: 905 EVSLDEHDIDFDQFGILIKVKFRQAGELQVLSAHHQSGGERSVATILYLVSLQDLTNCPF 964
Query: 964 RVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGP 1023
RVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGP
Sbjct: 965 RVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGP 1024
Query: 1024 WIEQPSKVWSSGECWGTVTGLVGESRC 1050
WIEQPSKVWS+G+CWGTV GL+G+S+C
Sbjct: 1025 WIEQPSKVWSNGDCWGTVVGLLGKSQC 1051
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255553458|ref|XP_002517770.1| structural maintenance of chromosomes 5 smc5, putative [Ricinus communis] gi|223543042|gb|EEF44577.1| structural maintenance of chromosomes 5 smc5, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|449436331|ref|XP_004135946.1| PREDICTED: structural maintenance of chromosomes protein 5-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449488823|ref|XP_004158182.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 5-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|297807615|ref|XP_002871691.1| structural maintenance of chromosomes family protein [Arabidopsis lyrata subsp. lyrata] gi|297317528|gb|EFH47950.1| structural maintenance of chromosomes family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|15237219|ref|NP_197096.1| structural maintenance of chromosomes 5 [Arabidopsis thaliana] gi|9755638|emb|CAC01791.1| putative protein [Arabidopsis thaliana] gi|332004841|gb|AED92224.1| structural maintenance of chromosomes 5 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|356576425|ref|XP_003556332.1| PREDICTED: structural maintenance of chromosomes protein 5-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357132304|ref|XP_003567770.1| PREDICTED: structural maintenance of chromosomes protein 5-like [Brachypodium distachyon] | Back alignment and taxonomy information |
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| >gi|115465843|ref|NP_001056521.1| Os05g0596600 [Oryza sativa Japonica Group] gi|57900674|gb|AAW57799.1| putative SMC5 protein [Oryza sativa Japonica Group] gi|113580072|dbj|BAF18435.1| Os05g0596600 [Oryza sativa Japonica Group] gi|215768112|dbj|BAH00341.1| unnamed protein product [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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| >gi|222632791|gb|EEE64923.1| hypothetical protein OsJ_19783 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1050 | ||||||
| TAIR|locus:2146107 | 1053 | SMC5 "AT5G15920" [Arabidopsis | 0.996 | 0.993 | 0.663 | 0.0 | |
| UNIPROTKB|D4A4D0 | 1088 | Smc5 "Protein Smc5" [Rattus no | 0.957 | 0.923 | 0.294 | 5.5e-125 | |
| UNIPROTKB|F1PEG5 | 1044 | SMC5 "Uncharacterized protein" | 0.950 | 0.955 | 0.299 | 1.9e-124 | |
| DICTYBASE|DDB_G0290919 | 1131 | smc5 "AAA ATPase domain-contai | 0.944 | 0.877 | 0.301 | 7.2e-123 | |
| ZFIN|ZDB-GENE-061013-288 | 1073 | smc5 "structural maintenance o | 0.957 | 0.936 | 0.297 | 6.5e-122 | |
| UNIPROTKB|Q5ZJY5 | 1065 | SMC5 "Structural maintenance o | 0.949 | 0.936 | 0.295 | 1.7e-114 | |
| UNIPROTKB|Q805A1 | 1065 | smc5 "Structural maintenance o | 0.957 | 0.943 | 0.280 | 2.2e-112 | |
| UNIPROTKB|F1P1S9 | 1041 | SMC5 "Structural maintenance o | 0.941 | 0.950 | 0.294 | 1.8e-110 | |
| UNIPROTKB|F1P1S0 | 1066 | SMC5 "Structural maintenance o | 0.950 | 0.936 | 0.294 | 3.8e-110 | |
| UNIPROTKB|F1NK20 | 1043 | SMC5 "Structural maintenance o | 0.947 | 0.953 | 0.292 | 1e-109 |
| TAIR|locus:2146107 SMC5 "AT5G15920" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 3542 (1251.9 bits), Expect = 0., P = 0.
Identities = 695/1048 (66%), Positives = 815/1048 (77%)
Query: 5 RVKRLKVSRGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIA 64
R KR K+SRGEDD++PGNIIEIELHNFMTF+HL+CKPGSRLNLVIGPNGSGKSSLVCAIA
Sbjct: 5 RAKRPKISRGEDDFLPGNIIEIELHNFMTFNHLVCKPGSRLNLVIGPNGSGKSSLVCAIA 64
Query: 65 LALGGDTQLLGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNG 124
L LGG+ QLLGRATS+GAYVKRGE+SGY+KISLRG+T+EE+LTI RKIDTRNKSEW FNG
Sbjct: 65 LCLGGEPQLLGRATSVGAYVKRGEDSGYVKISLRGNTREENLTIFRKIDTRNKSEWMFNG 124
Query: 125 KVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHC 184
V K +++EI ++FNIQVNNLTQFLPQDRVCEFAKL+PV+LLEETEKAVGDPQLPV H
Sbjct: 125 STVSKKDIVEIIQKFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPVHHR 184
Query: 185 ALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWL 244
ALVEKS LK +E V +NG+TLNQLKAL EQEKDVERVRQR L KV+SMKKKLPWL
Sbjct: 185 ALVEKSRDLKQLERAVAKNGETLNQLKALVDEQEKDVERVRQRELFLTKVDSMKKKLPWL 244
Query: 245 KYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINE 304
KYDMKKAEY+ L+ +PIE +K+EKA D CKK+ +L++
Sbjct: 245 KYDMKKAEYMDAKKRMKEAEKKLDEAAKNLNSMKEPIEKQKKEKAETDSKCKKVKNLMDA 304
Query: 305 NSKRRMDFLEKVDQG-VQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAY 363
N + R LEK D+ +V YK ILKA Q +P Y
Sbjct: 305 NGRNRCHLLEKEDEADARVVATYKELEELKKQEEHRQERILKATEDLVAAERELQNLPVY 364
Query: 364 EPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 423
E P K+E+L SQ+ EL N K+ QK + EK+L+Q + TLRQC D+LKDME+ NNKLL
Sbjct: 365 ERPVAKLEELSSQVTELHHSINGKKNQKEDNEKLLSQKRYTLRQCVDKLKDMENANNKLL 424
Query: 424 HALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSF 483
AL NSGA+ IF+AY W+QQ+RHE +E YGPVL+EVNV NR +A +LE HV YIWKSF
Sbjct: 425 KALANSGADRIFDAYQWVQQNRHEFKREVYGPVLVEVNVPNRENACFLEGHVSFYIWKSF 484
Query: 484 ITQDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHA 543
ITQD DRD L KNLK FDVP+LNYV N ++K PF IS++MR+LGI ARLDQ+FDAP A
Sbjct: 485 ITQDPEDRDLLVKNLKRFDVPVLNYVGNSGNQKAPFHISDQMRSLGIHARLDQIFDAPDA 544
Query: 544 VKEVLISQFGLDSSYIGSKETDQKADNVAKLGILDFWTPENHYRWSISRYGGHVSASVEP 603
VKEVL SQFGL+ SYIGSK TDQ+A+ V KLGI DFWTP+NHYRWS SRYGGH SASV+
Sbjct: 545 VKEVLNSQFGLEDSYIGSKITDQRAEEVYKLGIKDFWTPDNHYRWSSSRYGGHSSASVDS 604
Query: 604 VNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKEREE 663
V QSRLLLC VD +QTEQR +E+EAAKL KEREE
Sbjct: 605 VYQSRLLLCGVDVGELEKLRSRKEELEDSILFMEETHKSLQTEQRRLEEEAAKLHKEREE 664
Query: 664 IINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEI 723
I+N+ +EK+KRRE+E+ RK KLES+E+E+D++ ++AKL+DQA+ N ++ YAI +
Sbjct: 665 IVNVSYLEKKKRRELESRYQQRKTKLESLEQEEDMDASVAKLIDQASRANADRYTYAINL 724
Query: 724 KNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCR 783
K LLVE V+ KWSYAEKHMASIE + KIRE E N+KQ+EK A Q SL E CKKEVE +
Sbjct: 725 KKLLVEAVAHKWSYAEKHMASIELERKIRESEINIKQYEKTAQQLSLAVEYCKKEVEGKQ 784
Query: 784 KHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYE 843
+ L+ AKR AES+A ITPEL+KEF+EMPTT+EELEAAIQDN+SQANSI F+N+NILQEYE
Sbjct: 785 QRLATAKRDAESVATITPELKKEFMEMPTTVEELEAAIQDNLSQANSILFINENILQEYE 844
Query: 844 HRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAG 903
HRQ QI +STK E DK++L + EID+LKEKWLPTLR LV QINETFS NFQEMAVAG
Sbjct: 845 HRQSQIYTISTKLETDKRDLSICMKEIDSLKEKWLPTLRQLVGQINETFSHNFQEMAVAG 904
Query: 904 EVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPF 963
EVSLDE ++DFD++GI IKVKFR+SGQL+VLS+HHQSGGERSVSTILYLVSLQDLTNCPF
Sbjct: 905 EVSLDERDTDFDQYGIHIKVKFRESGQLQVLSSHHQSGGERSVSTILYLVSLQDLTNCPF 964
Query: 964 RVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGP 1023
RVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLP+LEYSEACSILNIMNGP
Sbjct: 965 RVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPELEYSEACSILNIMNGP 1024
Query: 1024 WIEQPSKVWSSGECWGTVTGLVGE-SRC 1050
+I +PSKVWS G+ WG++ E S+C
Sbjct: 1025 YIAEPSKVWSLGDSWGSLNRRRTEASQC 1052
|
|
| UNIPROTKB|D4A4D0 Smc5 "Protein Smc5" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PEG5 SMC5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0290919 smc5 "AAA ATPase domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-061013-288 smc5 "structural maintenance of chromosomes 5" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5ZJY5 SMC5 "Structural maintenance of chromosomes protein 5" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q805A1 smc5 "Structural maintenance of chromosomes protein 5" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1P1S9 SMC5 "Structural maintenance of chromosomes protein 5" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1P1S0 SMC5 "Structural maintenance of chromosomes protein 5" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NK20 SMC5 "Structural maintenance of chromosomes protein 5" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8IY18 | SMC5_HUMAN | No assigned EC number | 0.3116 | 0.9466 | 0.9028 | yes | no |
| Q8CG46 | SMC5_MOUSE | No assigned EC number | 0.3094 | 0.9466 | 0.9028 | yes | no |
| Q5ZJY5 | SMC5_CHICK | No assigned EC number | 0.3007 | 0.9352 | 0.9220 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1050 | |||
| cd03277 | 213 | cd03277, ABC_SMC5_euk, ATP-binding cassette domain | 3e-60 | |
| cd03277 | 213 | cd03277, ABC_SMC5_euk, ATP-binding cassette domain | 2e-50 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 7e-32 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 4e-25 | |
| cd03276 | 198 | cd03276, ABC_SMC6_euk, ATP-binding cassette domain | 3e-19 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 7e-19 | |
| cd03239 | 178 | cd03239, ABC_SMC_head, The SMC head domain belongs | 1e-15 | |
| pfam02463 | 1162 | pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | 1e-15 | |
| cd03239 | 178 | cd03239, ABC_SMC_head, The SMC head domain belongs | 9e-15 | |
| cd03275 | 247 | cd03275, ABC_SMC1_euk, ATP-binding cassette domain | 2e-12 | |
| pfam13476 | 204 | pfam13476, AAA_23, AAA domain | 9e-12 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 3e-11 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 1e-10 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 2e-10 | |
| cd03227 | 162 | cd03227, ABC_Class2, ATP-binding cassette domain o | 1e-09 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-09 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 9e-09 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 5e-08 | |
| cd03227 | 162 | cd03227, ABC_Class2, ATP-binding cassette domain o | 5e-08 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 8e-08 | |
| cd03276 | 198 | cd03276, ABC_SMC6_euk, ATP-binding cassette domain | 1e-07 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-07 | |
| pfam02463 | 1162 | pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | 2e-07 | |
| pfam13555 | 60 | pfam13555, AAA_29, P-loop containing region of AAA | 2e-07 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 4e-07 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 6e-07 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 3e-06 | |
| cd03240 | 204 | cd03240, ABC_Rad50, ATP-binding cassette domain of | 3e-06 | |
| cd03241 | 276 | cd03241, ABC_RecN, ATP-binding cassette domain of | 8e-06 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 1e-05 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 3e-05 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 7e-05 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 8e-05 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 8e-05 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 9e-05 | |
| cd03272 | 243 | cd03272, ABC_SMC3_euk, ATP-binding cassette domain | 3e-04 | |
| COG2433 | 652 | COG2433, COG2433, Uncharacterized conserved protei | 4e-04 | |
| TIGR04211 | 198 | TIGR04211, SH3_and_anchor, SH3 domain protein | 4e-04 | |
| cd03278 | 197 | cd03278, ABC_SMC_barmotin, ATP-binding cassette do | 6e-04 | |
| COG1106 | 371 | COG1106, COG1106, Predicted ATPases [General funct | 7e-04 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 0.001 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 0.002 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 0.002 | |
| cd00267 | 157 | cd00267, ABC_ATPase, ATP-binding cassette transpor | 0.002 | |
| TIGR00606 | 1311 | TIGR00606, rad50, rad50 | 0.002 | |
| cd03223 | 166 | cd03223, ABCD_peroxisomal_ALDP, ATP-binding casset | 0.002 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 0.003 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 0.003 | |
| COG3593 | 581 | COG3593, COG3593, Predicted ATP-dependent endonucl | 0.003 | |
| TIGR00611 | 365 | TIGR00611, recf, recF protein | 0.003 | |
| COG1195 | 363 | COG1195, RecF, Recombinational DNA repair ATPase ( | 0.003 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 0.004 | |
| PRK00064 | 361 | PRK00064, recF, recombination protein F; Reviewed | 0.004 |
| >gnl|CDD|213244 cd03277, ABC_SMC5_euk, ATP-binding cassette domain of eukaryotic SMC5 proteins | Back alignment and domain information |
|---|
Score = 204 bits (522), Expect = 3e-60
Identities = 68/103 (66%), Positives = 79/103 (76%)
Query: 923 VKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMF 982
VKFR+ QL+ L HHQSGGERSVST+LYL+SLQ+LT CPFRVVDEINQGMDP NERK+F
Sbjct: 111 VKFREGEQLQELDPHHQSGGERSVSTMLYLLSLQELTRCPFRVVDEINQGMDPTNERKVF 170
Query: 983 QQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGPWI 1025
LV A + T Q FL+TPKLLP L Y E ++L + NGP I
Sbjct: 171 DMLVETACKEGTSQYFLITPKLLPGLNYHEKMTVLCVYNGPHI 213
|
The structural maintenance of chromosomes (SMC) proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains. Amino-acid sequence homology of SMC proteins between species is largely confined to the amino- and carboxy-terminal globular domains. The amino-terminal domain contains a 'Walker A' nucleotide-binding domain (GxxGxGKS/T, in the single-letter amino-acid code), which by mutational studies has been shown to be essential in several proteins. The carboxy-terminal domain contains a sequence (the DA-box) that resembles a 'Walker B' motif, and a motif with homology to the signature sequence of the ATP-binding cassette (ABC) family of ATPases. The sequence homology within the carboxy-terminal domain is relatively high within the SMC1-SMC4 group, whereas SMC5 and SMC6 show some divergence in both of these sequences. In eukaryotic cells, the proteins are found as heterodimers of SMC1 paired with SMC3, SMC2 with SMC4, and SMC5 with SMC6 (formerly known as Rad18). Length = 213 |
| >gnl|CDD|213244 cd03277, ABC_SMC5_euk, ATP-binding cassette domain of eukaryotic SMC5 proteins | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|213243 cd03276, ABC_SMC6_euk, ATP-binding cassette domain of eukaryotic SM6 proteins | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|213206 cd03239, ABC_SMC_head, The SMC head domain belongs to the ATP-binding cassette superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|213206 cd03239, ABC_SMC_head, The SMC head domain belongs to the ATP-binding cassette superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|213242 cd03275, ABC_SMC1_euk, ATP-binding cassette domain of eukaryotic SMC1 proteins | Back alignment and domain information |
|---|
| >gnl|CDD|222160 pfam13476, AAA_23, AAA domain | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|213194 cd03227, ABC_Class2, ATP-binding cassette domain of non-transporter proteins | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|213194 cd03227, ABC_Class2, ATP-binding cassette domain of non-transporter proteins | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|213243 cd03276, ABC_SMC6_euk, ATP-binding cassette domain of eukaryotic SM6 proteins | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|205733 pfam13555, AAA_29, P-loop containing region of AAA domain | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|213207 cd03240, ABC_Rad50, ATP-binding cassette domain of Rad50 | Back alignment and domain information |
|---|
| >gnl|CDD|213208 cd03241, ABC_RecN, ATP-binding cassette domain of RecN | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|213239 cd03272, ABC_SMC3_euk, ATP-binding cassette domain of eukaryotic SMC3 proteins | Back alignment and domain information |
|---|
| >gnl|CDD|225288 COG2433, COG2433, Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|234501 TIGR04211, SH3_and_anchor, SH3 domain protein | Back alignment and domain information |
|---|
| >gnl|CDD|213245 cd03278, ABC_SMC_barmotin, ATP-binding cassette domain of barmotin, a member of the SMC protein family | Back alignment and domain information |
|---|
| >gnl|CDD|224031 COG1106, COG1106, Predicted ATPases [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|213179 cd00267, ABC_ATPase, ATP-binding cassette transporter nucleotide-binding domain | Back alignment and domain information |
|---|
| >gnl|CDD|129694 TIGR00606, rad50, rad50 | Back alignment and domain information |
|---|
| >gnl|CDD|213190 cd03223, ABCD_peroxisomal_ALDP, ATP-binding cassette domain of peroxisomal transporter, subfamily D | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|226121 COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|233051 TIGR00611, recf, recF protein | Back alignment and domain information |
|---|
| >gnl|CDD|224116 COG1195, RecF, Recombinational DNA repair ATPase (RecF pathway) [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|234608 PRK00064, recF, recombination protein F; Reviewed | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1050 | |||
| KOG0979 | 1072 | consensus Structural maintenance of chromosome pro | 100.0 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 100.0 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 100.0 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 100.0 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 100.0 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 100.0 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 100.0 | |
| KOG0018 | 1141 | consensus Structural maintenance of chromosome pro | 100.0 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 100.0 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 100.0 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 100.0 | |
| PRK01156 | 895 | chromosome segregation protein; Provisional | 100.0 | |
| COG0419 | 908 | SbcC ATPase involved in DNA repair [DNA replicatio | 100.0 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 100.0 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 100.0 | |
| PRK10246 | 1047 | exonuclease subunit SbcC; Provisional | 100.0 | |
| COG4717 | 984 | Uncharacterized conserved protein [Function unknow | 100.0 | |
| TIGR00618 | 1042 | sbcc exonuclease SbcC. This family is based on the | 100.0 | |
| PF13514 | 1111 | AAA_27: AAA domain | 100.0 | |
| PRK10869 | 553 | recombination and repair protein; Provisional | 100.0 | |
| TIGR02680 | 1353 | conserved hypothetical protein TIGR02680. Members | 100.0 | |
| KOG0962 | 1294 | consensus DNA repair protein RAD50, ABC-type ATPas | 99.97 | |
| COG0497 | 557 | RecN ATPase involved in DNA repair [DNA replicatio | 99.97 | |
| TIGR03185 | 650 | DNA_S_dndD DNA sulfur modification protein DndD. T | 99.97 | |
| PF02463 | 220 | SMC_N: RecF/RecN/SMC N terminal domain; InterPro: | 99.97 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 99.97 | |
| TIGR00634 | 563 | recN DNA repair protein RecN. All proteins in this | 99.95 | |
| COG4913 | 1104 | Uncharacterized protein conserved in bacteria [Fun | 99.94 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 99.9 | |
| cd03273 | 251 | ABC_SMC2_euk Eukaryotic SMC2 proteins; SMC protein | 99.89 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 99.88 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 99.88 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 99.88 | |
| cd03275 | 247 | ABC_SMC1_euk Eukaryotic SMC1 proteins; SMC protein | 99.86 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 99.86 | |
| cd03242 | 270 | ABC_RecF RecF is a recombinational DNA repair ATPa | 99.85 | |
| PRK00064 | 361 | recF recombination protein F; Reviewed | 99.84 | |
| cd03241 | 276 | ABC_RecN RecN ATPase involved in DNA repair; ABC ( | 99.84 | |
| PRK14079 | 349 | recF recombination protein F; Provisional | 99.83 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 99.82 | |
| cd03277 | 213 | ABC_SMC5_euk Eukaryotic SMC5 proteins; SMC protein | 99.82 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 99.81 | |
| TIGR00634 | 563 | recN DNA repair protein RecN. All proteins in this | 99.81 | |
| cd03272 | 243 | ABC_SMC3_euk Eukaryotic SMC3 proteins; SMC protein | 99.77 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 99.75 | |
| TIGR00611 | 365 | recf recF protein. All proteins in this family for | 99.74 | |
| COG1195 | 363 | RecF Recombinational DNA repair ATPase (RecF pathw | 99.73 | |
| cd03239 | 178 | ABC_SMC_head The structural maintenance of chromos | 99.7 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 99.69 | |
| PF13555 | 62 | AAA_29: P-loop containing region of AAA domain | 99.65 | |
| PF13476 | 202 | AAA_23: AAA domain; PDB: 3AV0_B 3AUY_B 3AUX_A 2O5V | 99.63 | |
| cd03276 | 198 | ABC_SMC6_euk Eukaryotic SMC6 proteins; SMC protein | 99.63 | |
| KOG0979 | 1072 | consensus Structural maintenance of chromosome pro | 99.61 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 99.59 | |
| cd03240 | 204 | ABC_Rad50 The catalytic domains of Rad50 are simil | 99.54 | |
| cd03279 | 213 | ABC_sbcCD SbcCD and other Mre11/Rad50 (MR) complex | 99.53 | |
| KOG0018 | 1141 | consensus Structural maintenance of chromosome pro | 99.52 | |
| COG3096 | 1480 | MukB Uncharacterized protein involved in chromosom | 99.52 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 99.46 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 99.38 | |
| cd03278 | 197 | ABC_SMC_barmotin Barmotin is a tight junction-asso | 99.38 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 99.35 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 99.31 | |
| cd03277 | 213 | ABC_SMC5_euk Eukaryotic SMC5 proteins; SMC protein | 99.3 | |
| cd03274 | 212 | ABC_SMC4_euk Eukaryotic SMC4 proteins; SMC protein | 99.27 | |
| COG3950 | 440 | Predicted ATP-binding protein involved in virulenc | 99.14 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 99.1 | |
| cd03227 | 162 | ABC_Class2 ABC-type Class 2 contains systems invol | 99.04 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 99.02 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 99.01 | |
| PF13166 | 712 | AAA_13: AAA domain | 98.97 | |
| PRK01156 | 895 | chromosome segregation protein; Provisional | 98.9 | |
| cd03276 | 198 | ABC_SMC6_euk Eukaryotic SMC6 proteins; SMC protein | 98.86 | |
| PF11398 | 373 | DUF2813: Protein of unknown function (DUF2813); In | 98.83 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 98.7 | |
| COG5293 | 591 | Predicted ATPase [General function prediction only | 98.66 | |
| PF04310 | 227 | MukB: MukB N-terminal; InterPro: IPR007406 This is | 98.64 | |
| COG3593 | 581 | Predicted ATP-dependent endonuclease of the OLD fa | 98.61 | |
| COG1106 | 371 | Predicted ATPases [General function prediction onl | 98.59 | |
| PF13175 | 415 | AAA_15: AAA ATPase domain | 98.57 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 98.56 | |
| TIGR00611 | 365 | recf recF protein. All proteins in this family for | 98.53 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 98.53 | |
| cd03278 | 197 | ABC_SMC_barmotin Barmotin is a tight junction-asso | 98.53 | |
| COG4637 | 373 | Predicted ATPase [General function prediction only | 98.51 | |
| cd03239 | 178 | ABC_SMC_head The structural maintenance of chromos | 98.5 | |
| PF13166 | 712 | AAA_13: AAA domain | 98.46 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 98.41 | |
| cd03275 | 247 | ABC_SMC1_euk Eukaryotic SMC1 proteins; SMC protein | 98.4 | |
| COG3910 | 233 | Predicted ATPase [General function prediction only | 98.38 | |
| COG1126 | 240 | GlnQ ABC-type polar amino acid transport system, A | 98.34 | |
| cd00267 | 157 | ABC_ATPase ABC (ATP-binding cassette) transporter | 98.31 | |
| cd03273 | 251 | ABC_SMC2_euk Eukaryotic SMC2 proteins; SMC protein | 98.31 | |
| PRK00064 | 361 | recF recombination protein F; Reviewed | 98.3 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 98.29 | |
| cd03227 | 162 | ABC_Class2 ABC-type Class 2 contains systems invol | 98.27 | |
| COG4604 | 252 | CeuD ABC-type enterochelin transport system, ATPas | 98.26 | |
| cd03241 | 276 | ABC_RecN RecN ATPase involved in DNA repair; ABC ( | 98.25 | |
| COG3840 | 231 | ThiQ ABC-type thiamine transport system, ATPase co | 98.24 | |
| cd03272 | 243 | ABC_SMC3_euk Eukaryotic SMC3 proteins; SMC protein | 98.23 | |
| cd03240 | 204 | ABC_Rad50 The catalytic domains of Rad50 are simil | 98.23 | |
| COG1121 | 254 | ZnuC ABC-type Mn/Zn transport systems, ATPase comp | 98.22 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 98.2 | |
| COG4987 | 573 | CydC ABC-type transport system involved in cytochr | 98.19 | |
| cd03274 | 212 | ABC_SMC4_euk Eukaryotic SMC4 proteins; SMC protein | 98.19 | |
| PF13558 | 90 | SbcCD_C: Putative exonuclease SbcCD, C subunit; PD | 98.19 | |
| COG1122 | 235 | CbiO ABC-type cobalt transport system, ATPase comp | 98.18 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 98.17 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 98.17 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 98.16 | |
| COG0396 | 251 | sufC Cysteine desulfurase activator ATPase [Posttr | 98.16 | |
| cd03231 | 201 | ABC_CcmA_heme_exporter CcmA, the ATP-binding compo | 98.16 | |
| cd03235 | 213 | ABC_Metallic_Cations ABC component of the metal-ty | 98.15 | |
| COG4674 | 249 | Uncharacterized ABC-type transport system, ATPase | 98.15 | |
| COG1136 | 226 | SalX ABC-type antimicrobial peptide transport syst | 98.14 | |
| COG4988 | 559 | CydD ABC-type transport system involved in cytochr | 98.14 | |
| TIGR01166 | 190 | cbiO cobalt transport protein ATP-binding subunit. | 98.13 | |
| cd03225 | 211 | ABC_cobalt_CbiO_domain1 Domain I of the ABC compon | 98.12 | |
| PRK14079 | 349 | recF recombination protein F; Provisional | 98.12 | |
| cd03259 | 213 | ABC_Carb_Solutes_like ABC Carbohydrate and Solute | 98.1 | |
| cd03260 | 227 | ABC_PstB_phosphate_transporter Phosphate uptake is | 98.1 | |
| TIGR02680 | 1353 | conserved hypothetical protein TIGR02680. Members | 98.09 | |
| cd03268 | 208 | ABC_BcrA_bacitracin_resist The BcrA subfamily repr | 98.09 | |
| cd03230 | 173 | ABC_DR_subfamily_A This family of ATP-binding prot | 98.09 | |
| cd03293 | 220 | ABC_NrtD_SsuB_transporters NrtD and SsuB are the A | 98.09 | |
| cd03269 | 210 | ABC_putative_ATPase This subfamily is involved in | 98.08 | |
| TIGR00960 | 216 | 3a0501s02 Type II (General) Secretory Pathway (IIS | 98.08 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 98.08 | |
| PF01576 | 859 | Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu | 98.07 | |
| cd03237 | 246 | ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 o | 98.07 | |
| TIGR02673 | 214 | FtsE cell division ATP-binding protein FtsE. This | 98.07 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 98.06 | |
| cd03229 | 178 | ABC_Class3 This class is comprised of all BPD (Bin | 98.06 | |
| TIGR02211 | 221 | LolD_lipo_ex lipoprotein releasing system, ATP-bin | 98.06 | |
| PF05557 | 722 | MAD: Mitotic checkpoint protein; InterPro: IPR0086 | 98.06 | |
| PRK11247 | 257 | ssuB aliphatic sulfonates transport ATP-binding su | 98.06 | |
| cd03214 | 180 | ABC_Iron-Siderophores_B12_Hemin ABC transporters, | 98.06 | |
| cd03220 | 224 | ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transpo | 98.05 | |
| COG1340 | 294 | Uncharacterized archaeal coiled-coil protein [Func | 98.05 | |
| COG1120 | 258 | FepC ABC-type cobalamin/Fe3+-siderophores transpor | 98.05 | |
| PRK11629 | 233 | lolD lipoprotein transporter ATP-binding subunit; | 98.05 | |
| cd03226 | 205 | ABC_cobalt_CbiO_domain2 Domain II of the ABC compo | 98.04 | |
| TIGR01184 | 230 | ntrCD nitrate transport ATP-binding subunits C and | 98.04 | |
| COG1124 | 252 | DppF ABC-type dipeptide/oligopeptide/nickel transp | 98.04 | |
| COG4938 | 374 | Uncharacterized conserved protein [Function unknow | 98.03 | |
| COG0444 | 316 | DppD ABC-type dipeptide/oligopeptide/nickel transp | 98.03 | |
| cd03232 | 192 | ABC_PDR_domain2 The pleiotropic drug resistance-li | 98.03 | |
| cd03263 | 220 | ABC_subfamily_A The ABCA subfamily mediates the tr | 98.03 | |
| cd03245 | 220 | ABCC_bacteriocin_exporters ABC-type bacteriocin ex | 98.02 | |
| TIGR01277 | 213 | thiQ thiamine ABC transporter, ATP-binding protein | 98.02 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 98.02 | |
| cd03264 | 211 | ABC_drug_resistance_like ABC-type multidrug transp | 98.01 | |
| PRK14245 | 250 | phosphate ABC transporter ATP-binding protein; Pro | 98.01 | |
| cd03266 | 218 | ABC_NatA_sodium_exporter NatA is the ATPase compon | 98.01 | |
| COG4559 | 259 | ABC-type hemin transport system, ATPase component | 98.01 | |
| cd03246 | 173 | ABCC_Protease_Secretion This family represents the | 98.01 | |
| cd03216 | 163 | ABC_Carb_Monos_I This family represents the domain | 98.0 | |
| cd03256 | 241 | ABC_PhnC_transporter ABC-type phosphate/phosphonat | 98.0 | |
| cd03262 | 213 | ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP- | 98.0 | |
| cd03298 | 211 | ABC_ThiQ_thiamine_transporter ABC-type thiamine tr | 97.99 | |
| TIGR01189 | 198 | ccmA heme ABC exporter, ATP-binding protein CcmA. | 97.99 | |
| PRK10584 | 228 | putative ABC transporter ATP-binding protein YbbA; | 97.98 | |
| cd03233 | 202 | ABC_PDR_domain1 The pleiotropic drug resistance (P | 97.98 | |
| PRK13540 | 200 | cytochrome c biogenesis protein CcmA; Provisional | 97.98 | |
| cd03255 | 218 | ABC_MJ0796_Lo1CDE_FtsE This family is comprised of | 97.98 | |
| cd03248 | 226 | ABCC_TAP TAP, the Transporter Associated with Anti | 97.98 | |
| PRK10619 | 257 | histidine/lysine/arginine/ornithine transporter su | 97.98 | |
| COG5293 | 591 | Predicted ATPase [General function prediction only | 97.97 | |
| PRK13543 | 214 | cytochrome c biogenesis protein CcmA; Provisional | 97.97 | |
| cd03261 | 235 | ABC_Org_Solvent_Resistant ABC (ATP-binding cassett | 97.97 | |
| PRK11248 | 255 | tauB taurine transporter ATP-binding subunit; Prov | 97.97 | |
| cd03219 | 236 | ABC_Mj1267_LivG_branched The Mj1267/LivG ABC trans | 97.97 | |
| cd03292 | 214 | ABC_FtsE_transporter FtsE is a hydrophilic nucleot | 97.97 | |
| PRK14247 | 250 | phosphate ABC transporter ATP-binding protein; Pro | 97.97 | |
| cd03215 | 182 | ABC_Carb_Monos_II This family represents domain II | 97.97 | |
| PRK14242 | 253 | phosphate transporter ATP-binding protein; Provisi | 97.97 | |
| PRK14270 | 251 | phosphate ABC transporter ATP-binding protein; Pro | 97.97 | |
| cd03265 | 220 | ABC_DrrA DrrA is the ATP-binding protein component | 97.96 | |
| PRK13538 | 204 | cytochrome c biogenesis protein CcmA; Provisional | 97.96 | |
| PRK11614 | 237 | livF leucine/isoleucine/valine transporter ATP-bin | 97.96 | |
| TIGR03864 | 236 | PQQ_ABC_ATP ABC transporter, ATP-binding subunit, | 97.96 | |
| cd03297 | 214 | ABC_ModC_molybdenum_transporter ModC is an ABC-typ | 97.96 | |
| PRK14268 | 258 | phosphate ABC transporter ATP-binding protein; Pro | 97.96 | |
| TIGR00972 | 247 | 3a0107s01c2 phosphate ABC transporter, ATP-binding | 97.96 | |
| cd03213 | 194 | ABCG_EPDR ABCG transporters are involved in eye pi | 97.96 | |
| cd03228 | 171 | ABCC_MRP_Like The MRP (Mutidrug Resistance Protein | 97.95 | |
| COG1131 | 293 | CcmA ABC-type multidrug transport system, ATPase c | 97.95 | |
| PRK14262 | 250 | phosphate ABC transporter ATP-binding protein; Pro | 97.95 | |
| cd03238 | 176 | ABC_UvrA The excision repair protein UvrA; Nucleot | 97.95 | |
| PRK15079 | 331 | oligopeptide ABC transporter ATP-binding protein O | 97.95 | |
| cd03249 | 238 | ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) | 97.95 | |
| cd03254 | 229 | ABCC_Glucan_exporter_like Glucan exporter ATP-bind | 97.95 | |
| TIGR03608 | 206 | L_ocin_972_ABC putative bacteriocin export ABC tra | 97.94 | |
| cd03224 | 222 | ABC_TM1139_LivF_branched LivF (TM1139) is part of | 97.94 | |
| PRK13539 | 207 | cytochrome c biogenesis protein CcmA; Provisional | 97.94 | |
| PRK14241 | 258 | phosphate transporter ATP-binding protein; Provisi | 97.94 | |
| cd03222 | 177 | ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibi | 97.94 | |
| PRK11264 | 250 | putative amino-acid ABC transporter ATP-binding pr | 97.94 | |
| cd03296 | 239 | ABC_CysA_sulfate_importer Part of the ABC transpor | 97.94 | |
| PRK14259 | 269 | phosphate ABC transporter ATP-binding protein; Pro | 97.94 | |
| cd03267 | 236 | ABC_NatA_like Similar in sequence to NatA, this is | 97.94 | |
| PRK10908 | 222 | cell division protein FtsE; Provisional | 97.94 | |
| PRK10771 | 232 | thiQ thiamine transporter ATP-binding subunit; Pro | 97.94 | |
| PRK14269 | 246 | phosphate ABC transporter ATP-binding protein; Pro | 97.94 | |
| TIGR03771 | 223 | anch_rpt_ABC anchored repeat-type ABC transporter, | 97.93 | |
| TIGR02315 | 243 | ABC_phnC phosphonate ABC transporter, ATP-binding | 97.93 | |
| PRK11124 | 242 | artP arginine transporter ATP-binding subunit; Pro | 97.93 | |
| cd03218 | 232 | ABC_YhbG The ABC transporters belonging to the Yhb | 97.93 | |
| cd03258 | 233 | ABC_MetN_methionine_transporter MetN (also known a | 97.93 | |
| cd03257 | 228 | ABC_NikE_OppD_transporters The ABC transporter sub | 97.93 | |
| PRK13651 | 305 | cobalt transporter ATP-binding subunit; Provisiona | 97.93 | |
| cd03252 | 237 | ABCC_Hemolysin The ABC-transporter hemolysin B is | 97.93 | |
| PRK14273 | 254 | phosphate ABC transporter ATP-binding protein; Pro | 97.92 | |
| TIGR03411 | 242 | urea_trans_UrtD urea ABC transporter, ATP-binding | 97.92 | |
| PRK11831 | 269 | putative ABC transporter ATP-binding protein YrbF; | 97.92 | |
| PRK14274 | 259 | phosphate ABC transporter ATP-binding protein; Pro | 97.92 | |
| TIGR03740 | 223 | galliderm_ABC gallidermin-class lantibiotic protec | 97.92 | |
| PRK14240 | 250 | phosphate transporter ATP-binding protein; Provisi | 97.92 | |
| cd03244 | 221 | ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. | 97.92 | |
| PRK09493 | 240 | glnQ glutamine ABC transporter ATP-binding protein | 97.91 | |
| TIGR01978 | 243 | sufC FeS assembly ATPase SufC. SufC is part of the | 97.91 | |
| PRK14244 | 251 | phosphate ABC transporter ATP-binding protein; Pro | 97.91 | |
| PRK14250 | 241 | phosphate ABC transporter ATP-binding protein; Pro | 97.91 | |
| PRK15056 | 272 | manganese/iron transporter ATP-binding protein; Pr | 97.91 | |
| cd03270 | 226 | ABC_UvrA_I The excision repair protein UvrA domain | 97.91 | |
| PRK13643 | 288 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.91 | |
| cd03251 | 234 | ABCC_MsbA MsbA is an essential ABC transporter, cl | 97.91 | |
| PRK13631 | 320 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.91 | |
| TIGR02770 | 230 | nickel_nikD nickel import ATP-binding protein NikD | 97.91 | |
| cd03217 | 200 | ABC_FeS_Assembly ABC-type transport system involve | 97.91 | |
| PRK11231 | 255 | fecE iron-dicitrate transporter ATP-binding subuni | 97.91 | |
| PRK14239 | 252 | phosphate transporter ATP-binding protein; Provisi | 97.91 | |
| PRK13546 | 264 | teichoic acids export protein ATP-binding subunit; | 97.91 | |
| PRK14238 | 271 | phosphate transporter ATP-binding protein; Provisi | 97.91 | |
| cd03247 | 178 | ABCC_cytochrome_bd The CYD subfamily implicated in | 97.9 | |
| PRK14271 | 276 | phosphate ABC transporter ATP-binding protein; Pro | 97.9 | |
| TIGR02324 | 224 | CP_lyasePhnL phosphonate C-P lyase system protein | 97.9 | |
| PRK11022 | 326 | dppD dipeptide transporter ATP-binding subunit; Pr | 97.9 | |
| TIGR01188 | 302 | drrA daunorubicin resistance ABC transporter ATP-b | 97.9 | |
| COG4694 | 758 | Uncharacterized protein conserved in bacteria [Fun | 97.9 | |
| PRK13638 | 271 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.9 | |
| PRK13637 | 287 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.9 | |
| TIGR02323 | 253 | CP_lyasePhnK phosphonate C-P lyase system protein | 97.89 | |
| cd03301 | 213 | ABC_MalK_N The N-terminal ATPase domain of the mal | 97.89 | |
| PRK10575 | 265 | iron-hydroxamate transporter ATP-binding subunit; | 97.89 | |
| PRK14254 | 285 | phosphate ABC transporter ATP-binding protein; Pro | 97.89 | |
| PRK15112 | 267 | antimicrobial peptide ABC system ATP-binding prote | 97.89 | |
| PRK10744 | 260 | pstB phosphate transporter ATP-binding protein; Pr | 97.88 | |
| PRK14253 | 249 | phosphate ABC transporter ATP-binding protein; Pro | 97.88 | |
| TIGR01288 | 303 | nodI ATP-binding ABC transporter family nodulation | 97.88 | |
| PRK14235 | 267 | phosphate transporter ATP-binding protein; Provisi | 97.88 | |
| PRK13541 | 195 | cytochrome c biogenesis protein CcmA; Provisional | 97.88 | |
| PRK09544 | 251 | znuC high-affinity zinc transporter ATPase; Review | 97.88 | |
| PRK14258 | 261 | phosphate ABC transporter ATP-binding protein; Pro | 97.88 | |
| PRK13649 | 280 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.88 | |
| cd03223 | 166 | ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cass | 97.87 | |
| cd03294 | 269 | ABC_Pro_Gly_Bertaine This family comprises the gly | 97.87 | |
| PRK13646 | 286 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.87 | |
| PRK14265 | 274 | phosphate ABC transporter ATP-binding protein; Pro | 97.87 | |
| PRK14275 | 286 | phosphate ABC transporter ATP-binding protein; Pro | 97.87 | |
| PRK14255 | 252 | phosphate ABC transporter ATP-binding protein; Pro | 97.87 | |
| PRK14272 | 252 | phosphate ABC transporter ATP-binding protein; Pro | 97.87 | |
| PRK14261 | 253 | phosphate ABC transporter ATP-binding protein; Pro | 97.87 | |
| COG1121 | 254 | ZnuC ABC-type Mn/Zn transport systems, ATPase comp | 97.87 | |
| PRK13645 | 289 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.87 | |
| TIGR01187 | 325 | potA spermidine/putrescine ABC transporter ATP-bin | 97.87 | |
| PRK14267 | 253 | phosphate ABC transporter ATP-binding protein; Pro | 97.86 | |
| PRK11308 | 327 | dppF dipeptide transporter ATP-binding subunit; Pr | 97.86 | |
| PRK13545 | 549 | tagH teichoic acids export protein ATP-binding sub | 97.86 | |
| PRK10247 | 225 | putative ABC transporter ATP-binding protein YbbL; | 97.86 | |
| PRK14243 | 264 | phosphate transporter ATP-binding protein; Provisi | 97.86 | |
| cd03221 | 144 | ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is | 97.85 | |
| PRK14264 | 305 | phosphate ABC transporter ATP-binding protein; Pro | 97.85 | |
| cd03295 | 242 | ABC_OpuCA_Osmoprotection OpuCA is a the ATP bindin | 97.85 | |
| TIGR02314 | 343 | ABC_MetN D-methionine ABC transporter, ATP-binding | 97.85 | |
| TIGR03410 | 230 | urea_trans_UrtE urea ABC transporter, ATP-binding | 97.85 | |
| PRK14263 | 261 | phosphate ABC transporter ATP-binding protein; Pro | 97.85 | |
| PRK14248 | 268 | phosphate ABC transporter ATP-binding protein; Pro | 97.85 | |
| PRK13548 | 258 | hmuV hemin importer ATP-binding subunit; Provision | 97.85 | |
| TIGR01186 | 363 | proV glycine betaine/L-proline transport ATP bindi | 97.85 | |
| PRK11637 | 428 | AmiB activator; Provisional | 97.85 | |
| cd03369 | 207 | ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-ty | 97.84 | |
| TIGR03005 | 252 | ectoine_ehuA ectoine/hydroxyectoine ABC transporte | 97.84 | |
| PRK11153 | 343 | metN DL-methionine transporter ATP-binding subunit | 97.84 | |
| cd03234 | 226 | ABCG_White The White subfamily represents ABC tran | 97.84 | |
| cd03253 | 236 | ABCC_ATM1_transporter ATM1 is an ABC transporter t | 97.84 | |
| PRK11300 | 255 | livG leucine/isoleucine/valine transporter ATP-bin | 97.84 | |
| PRK14266 | 250 | phosphate ABC transporter ATP-binding protein; Pro | 97.84 | |
| PRK14251 | 251 | phosphate ABC transporter ATP-binding protein; Pro | 97.83 | |
| PRK13536 | 340 | nodulation factor exporter subunit NodI; Provision | 97.83 | |
| PRK15093 | 330 | antimicrobial peptide ABC transporter ATP-binding | 97.83 | |
| PRK11650 | 356 | ugpC glycerol-3-phosphate transporter ATP-binding | 97.83 | |
| PRK09473 | 330 | oppD oligopeptide transporter ATP-binding componen | 97.83 | |
| COG1116 | 248 | TauB ABC-type nitrate/sulfonate/bicarbonate transp | 97.83 | |
| PRK09580 | 248 | sufC cysteine desulfurase ATPase component; Review | 97.83 | |
| TIGR03873 | 256 | F420-0_ABC_ATP proposed F420-0 ABC transporter, AT | 97.83 | |
| COG4598 | 256 | HisP ABC-type histidine transport system, ATPase c | 97.83 | |
| PRK10070 | 400 | glycine betaine transporter ATP-binding subunit; P | 97.82 | |
| PRK10253 | 265 | iron-enterobactin transporter ATP-binding protein; | 97.82 | |
| CHL00131 | 252 | ycf16 sulfate ABC transporter protein; Validated | 97.81 | |
| PRK13634 | 290 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.81 | |
| PRK10418 | 254 | nikD nickel transporter ATP-binding protein NikD; | 97.81 | |
| COG1340 | 294 | Uncharacterized archaeal coiled-coil protein [Func | 97.81 | |
| PRK13641 | 287 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.81 | |
| PRK11701 | 258 | phnK phosphonate C-P lyase system protein PhnK; Pr | 97.8 | |
| PRK13409 | 590 | putative ATPase RIL; Provisional | 97.8 | |
| PRK13647 | 274 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.8 | |
| COG1120 | 258 | FepC ABC-type cobalamin/Fe3+-siderophores transpor | 97.8 | |
| PRK13648 | 269 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.8 | |
| PRK14256 | 252 | phosphate ABC transporter ATP-binding protein; Pro | 97.8 | |
| PRK14260 | 259 | phosphate ABC transporter ATP-binding protein; Pro | 97.8 | |
| PRK13639 | 275 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.8 | |
| COG4619 | 223 | ABC-type uncharacterized transport system, ATPase | 97.8 | |
| PRK03695 | 248 | vitamin B12-transporter ATPase; Provisional | 97.8 | |
| PRK14252 | 265 | phosphate ABC transporter ATP-binding protein; Pro | 97.79 | |
| PRK13632 | 271 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.79 | |
| cd03271 | 261 | ABC_UvrA_II The excision repair protein UvrA domai | 97.79 | |
| PRK10419 | 268 | nikE nickel transporter ATP-binding protein NikE; | 97.79 | |
| TIGR03269 | 520 | met_CoM_red_A2 methyl coenzyme M reductase system, | 97.79 | |
| PRK15439 | 510 | autoinducer 2 ABC transporter ATP-binding protein | 97.79 | |
| PRK14237 | 267 | phosphate transporter ATP-binding protein; Provisi | 97.79 | |
| PRK13650 | 279 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.79 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 97.78 | |
| PRK14236 | 272 | phosphate transporter ATP-binding protein; Provisi | 97.78 | |
| PRK09452 | 375 | potA putrescine/spermidine ABC transporter ATPase | 97.78 | |
| PRK10895 | 241 | lipopolysaccharide ABC transporter ATP-binding pro | 97.78 | |
| PRK14249 | 251 | phosphate ABC transporter ATP-binding protein; Pro | 97.78 | |
| COG1119 | 257 | ModF ABC-type molybdenum transport system, ATPase | 97.78 | |
| PRK13536 | 340 | nodulation factor exporter subunit NodI; Provision | 97.77 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 97.77 | |
| PRK13547 | 272 | hmuV hemin importer ATP-binding subunit; Provision | 97.77 | |
| COG4559 | 259 | ABC-type hemin transport system, ATPase component | 97.76 | |
| COG4525 | 259 | TauB ABC-type taurine transport system, ATPase com | 97.76 | |
| TIGR02633 | 500 | xylG D-xylose ABC transporter, ATP-binding protein | 97.76 | |
| TIGR03258 | 362 | PhnT 2-aminoethylphosphonate ABC transport system, | 97.76 | |
| cd03300 | 232 | ABC_PotA_N PotA is an ABC-type transporter and the | 97.76 | |
| PRK13537 | 306 | nodulation ABC transporter NodI; Provisional | 97.76 | |
| PRK11000 | 369 | maltose/maltodextrin transporter ATP-binding prote | 97.76 | |
| TIGR02142 | 354 | modC_ABC molybdenum ABC transporter, ATP-binding p | 97.75 | |
| COG4133 | 209 | CcmA ABC-type transport system involved in cytochr | 97.75 | |
| TIGR02769 | 265 | nickel_nikE nickel import ATP-binding protein NikE | 97.75 | |
| PRK09984 | 262 | phosphonate/organophosphate ester transporter subu | 97.75 | |
| COG4608 | 268 | AppF ABC-type oligopeptide transport system, ATPas | 97.75 | |
| cd03279 | 213 | ABC_sbcCD SbcCD and other Mre11/Rad50 (MR) complex | 97.75 | |
| PRK10938 | 490 | putative molybdenum transport ATP-binding protein | 97.74 | |
| PRK13642 | 277 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.74 | |
| PRK13644 | 274 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.74 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 97.74 | |
| PRK13635 | 279 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.74 | |
| PRK11144 | 352 | modC molybdate transporter ATP-binding protein; Pr | 97.73 | |
| PRK13633 | 280 | cobalt transporter ATP-binding subunit; Provisiona | 97.73 | |
| COG1125 | 309 | OpuBA ABC-type proline/glycine betaine transport s | 97.73 | |
| PRK15177 | 213 | Vi polysaccharide export ATP-binding protein VexC; | 97.73 | |
| PRK14257 | 329 | phosphate ABC transporter ATP-binding protein; Pro | 97.72 | |
| PRK11637 | 428 | AmiB activator; Provisional | 97.72 | |
| PRK10938 | 490 | putative molybdenum transport ATP-binding protein | 97.72 | |
| PRK15134 | 529 | microcin C ABC transporter ATP-binding protein Yej | 97.71 | |
| KOG0057 | 591 | consensus Mitochondrial Fe/S cluster exporter, ABC | 97.71 | |
| PRK13640 | 282 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.71 | |
| cd03299 | 235 | ABC_ModC_like Archeal protein closely related to M | 97.71 | |
| PRK10762 | 501 | D-ribose transporter ATP binding protein; Provisio | 97.71 | |
| COG1123 | 539 | ATPase components of various ABC-type transport sy | 97.7 | |
| COG1117 | 253 | PstB ABC-type phosphate transport system, ATPase c | 97.7 | |
| PRK13636 | 283 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.7 | |
| PRK10982 | 491 | galactose/methyl galaxtoside transporter ATP-bindi | 97.69 | |
| TIGR00968 | 237 | 3a0106s01 sulfate ABC transporter, ATP-binding pro | 97.69 | |
| cd03242 | 270 | ABC_RecF RecF is a recombinational DNA repair ATPa | 97.69 | |
| cd03236 | 255 | ABC_RNaseL_inhibitor_domain1 The ATPase domain 1 o | 97.69 | |
| PRK10851 | 353 | sulfate/thiosulfate transporter subunit; Provision | 97.69 | |
| COG1135 | 339 | AbcC ABC-type metal ion transport system, ATPase c | 97.69 | |
| cd03291 | 282 | ABCC_CFTR1 The CFTR subfamily domain 1. The cystic | 97.68 | |
| PRK10261 | 623 | glutathione transporter ATP-binding protein; Provi | 97.68 | |
| PRK09700 | 510 | D-allose transporter ATP-binding protein; Provisio | 97.68 | |
| PRK15134 | 529 | microcin C ABC transporter ATP-binding protein Yej | 97.67 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 97.67 | |
| PRK11288 | 501 | araG L-arabinose transporter ATP-binding protein; | 97.67 | |
| PRK13549 | 506 | xylose transporter ATP-binding subunit; Provisiona | 97.67 | |
| COG1127 | 263 | Ttg2A ABC-type transport system involved in resist | 97.67 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 97.67 | |
| TIGR02203 | 571 | MsbA_lipidA lipid A export permease/ATP-binding pr | 97.66 | |
| PRK13652 | 277 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.66 | |
| TIGR02633 | 500 | xylG D-xylose ABC transporter, ATP-binding protein | 97.66 | |
| cd03250 | 204 | ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. | 97.66 | |
| PRK10982 | 491 | galactose/methyl galaxtoside transporter ATP-bindi | 97.65 | |
| cd03238 | 176 | ABC_UvrA The excision repair protein UvrA; Nucleot | 97.65 | |
| PRK11432 | 351 | fbpC ferric transporter ATP-binding subunit; Provi | 97.65 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 97.65 | |
| PRK11288 | 501 | araG L-arabinose transporter ATP-binding protein; | 97.65 | |
| TIGR03415 | 382 | ABC_choXWV_ATP choline ABC transporter, ATP-bindin | 97.65 | |
| PF06470 | 120 | SMC_hinge: SMC proteins Flexible Hinge Domain; Int | 97.64 | |
| TIGR03522 | 301 | GldA_ABC_ATP gliding motility-associated ABC trans | 97.64 | |
| PRK13409 | 590 | putative ATPase RIL; Provisional | 97.64 | |
| PRK14246 | 257 | phosphate ABC transporter ATP-binding protein; Pro | 97.63 | |
| TIGR03269 | 520 | met_CoM_red_A2 methyl coenzyme M reductase system, | 97.63 | |
| TIGR03719 | 552 | ABC_ABC_ChvD ATP-binding cassette protein, ChvD fa | 97.63 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 97.63 | |
| cd03221 | 144 | ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is | 97.62 | |
| PRK13549 | 506 | xylose transporter ATP-binding subunit; Provisiona | 97.62 | |
| TIGR03265 | 353 | PhnT2 putative 2-aminoethylphosphonate ABC transpo | 97.61 | |
| cd00267 | 157 | ABC_ATPase ABC (ATP-binding cassette) transporter | 97.61 | |
| cd03288 | 257 | ABCC_SUR2 The SUR domain 2. The sulfonylurea recep | 97.61 | |
| PRK13539 | 207 | cytochrome c biogenesis protein CcmA; Provisional | 97.61 | |
| PRK10261 | 623 | glutathione transporter ATP-binding protein; Provi | 97.61 | |
| COG1137 | 243 | YhbG ABC-type (unclassified) transport system, ATP | 97.61 | |
| cd03215 | 182 | ABC_Carb_Monos_II This family represents domain II | 97.61 | |
| cd03264 | 211 | ABC_drug_resistance_like ABC-type multidrug transp | 97.61 | |
| TIGR02982 | 220 | heterocyst_DevA ABC exporter ATP-binding subunit, | 97.61 | |
| PRK11174 | 588 | cysteine/glutathione ABC transporter membrane/ATP- | 97.6 | |
| PRK13538 | 204 | cytochrome c biogenesis protein CcmA; Provisional | 97.6 | |
| PRK15439 | 510 | autoinducer 2 ABC transporter ATP-binding protein | 97.6 | |
| PRK14247 | 250 | phosphate ABC transporter ATP-binding protein; Pro | 97.6 | |
| TIGR00630 | 924 | uvra excinuclease ABC, A subunit. This family is b | 97.6 | |
| cd03296 | 239 | ABC_CysA_sulfate_importer Part of the ABC transpor | 97.59 | |
| COG1101 | 263 | PhnK ABC-type uncharacterized transport system, AT | 97.59 | |
| TIGR02868 | 529 | CydC thiol reductant ABC exporter, CydC subunit. T | 97.59 | |
| PF00005 | 137 | ABC_tran: ABC transporter This structure is on hol | 97.58 | |
| PRK09536 | 402 | btuD corrinoid ABC transporter ATPase; Reviewed | 97.58 | |
| PRK09700 | 510 | D-allose transporter ATP-binding protein; Provisio | 97.58 | |
| COG1132 | 567 | MdlB ABC-type multidrug transport system, ATPase a | 97.57 | |
| PRK13631 | 320 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.57 | |
| cd03290 | 218 | ABCC_SUR1_N The SUR domain 1. The sulfonylurea rec | 97.57 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 97.56 | |
| TIGR02315 | 243 | ABC_phnC phosphonate ABC transporter, ATP-binding | 97.56 | |
| cd03289 | 275 | ABCC_CFTR2 The CFTR subfamily domain 2. The cystic | 97.56 | |
| COG1123 | 539 | ATPase components of various ABC-type transport sy | 97.56 | |
| COG1126 | 240 | GlnQ ABC-type polar amino acid transport system, A | 97.56 | |
| PRK11607 | 377 | potG putrescine transporter ATP-binding subunit; P | 97.55 | |
| COG4181 | 228 | Predicted ABC-type transport system involved in ly | 97.55 | |
| PF05701 | 522 | WEMBL: Weak chloroplast movement under blue light; | 97.55 | |
| PRK10762 | 501 | D-ribose transporter ATP binding protein; Provisio | 97.55 | |
| PRK14266 | 250 | phosphate ABC transporter ATP-binding protein; Pro | 97.55 | |
| TIGR02673 | 214 | FtsE cell division ATP-binding protein FtsE. This | 97.54 | |
| PRK11248 | 255 | tauB taurine transporter ATP-binding subunit; Prov | 97.54 | |
| PRK13657 | 588 | cyclic beta-1,2-glucan ABC transporter; Provisiona | 97.54 | |
| cd03262 | 213 | ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP- | 97.54 | |
| PRK13638 | 271 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.53 | |
| COG1124 | 252 | DppF ABC-type dipeptide/oligopeptide/nickel transp | 97.53 | |
| COG3839 | 338 | MalK ABC-type sugar transport systems, ATPase comp | 97.53 | |
| COG2274 | 709 | SunT ABC-type bacteriocin/lantibiotic exporters, c | 97.52 | |
| PRK11176 | 582 | lipid transporter ATP-binding/permease protein; Pr | 97.52 | |
| PRK10789 | 569 | putative multidrug transporter membrane\ATP-bindin | 97.51 | |
| TIGR01192 | 585 | chvA glucan exporter ATP-binding protein. This mod | 97.51 | |
| PRK14250 | 241 | phosphate ABC transporter ATP-binding protein; Pro | 97.51 | |
| TIGR01166 | 190 | cbiO cobalt transport protein ATP-binding subunit. | 97.51 | |
| PRK14262 | 250 | phosphate ABC transporter ATP-binding protein; Pro | 97.51 | |
| PRK14274 | 259 | phosphate ABC transporter ATP-binding protein; Pro | 97.5 | |
| PRK14261 | 253 | phosphate ABC transporter ATP-binding protein; Pro | 97.5 | |
| PRK11264 | 250 | putative amino-acid ABC transporter ATP-binding pr | 97.5 | |
| cd03224 | 222 | ABC_TM1139_LivF_branched LivF (TM1139) is part of | 97.5 | |
| TIGR03375 | 694 | type_I_sec_LssB type I secretion system ATPase, Ls | 97.5 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 97.49 | |
| cd03255 | 218 | ABC_MJ0796_Lo1CDE_FtsE This family is comprised of | 97.49 | |
| PRK11231 | 255 | fecE iron-dicitrate transporter ATP-binding subuni | 97.49 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 97.49 | |
| PRK14242 | 253 | phosphate transporter ATP-binding protein; Provisi | 97.49 | |
| COG0411 | 250 | LivG ABC-type branched-chain amino acid transport | 97.49 | |
| PRK10636 | 638 | putative ABC transporter ATP-binding protein; Prov | 97.49 | |
| PRK11247 | 257 | ssuB aliphatic sulfonates transport ATP-binding su | 97.48 | |
| PRK13648 | 269 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.48 | |
| cd03269 | 210 | ABC_putative_ATPase This subfamily is involved in | 97.48 | |
| cd03219 | 236 | ABC_Mj1267_LivG_branched The Mj1267/LivG ABC trans | 97.47 | |
| COG4172 | 534 | ABC-type uncharacterized transport system, duplica | 97.47 | |
| cd03261 | 235 | ABC_Org_Solvent_Resistant ABC (ATP-binding cassett | 97.47 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 97.47 | |
| PRK10790 | 592 | putative multidrug transporter membrane\ATP-bindin | 97.47 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 97.47 | |
| TIGR01842 | 544 | type_I_sec_PrtD type I secretion system ABC transp | 97.47 | |
| cd03248 | 226 | ABCC_TAP TAP, the Transporter Associated with Anti | 97.47 | |
| PRK13540 | 200 | cytochrome c biogenesis protein CcmA; Provisional | 97.46 | |
| PRK14253 | 249 | phosphate ABC transporter ATP-binding protein; Pro | 97.46 | |
| PRK13541 | 195 | cytochrome c biogenesis protein CcmA; Provisional | 97.46 | |
| PRK14245 | 250 | phosphate ABC transporter ATP-binding protein; Pro | 97.46 | |
| COG1245 | 591 | Predicted ATPase, RNase L inhibitor (RLI) homolog | 97.46 | |
| PRK13644 | 274 | cbiO cobalt transporter ATP-binding subunit; Provi | 97.46 | |
| cd03260 | 227 | ABC_PstB_phosphate_transporter Phosphate uptake is | 97.45 | |
| cd03265 | 220 | ABC_DrrA DrrA is the ATP-binding protein component | 97.45 | |
| PRK11701 | 258 | phnK phosphonate C-P lyase system protein PhnK; Pr | 97.45 | |
| TIGR00960 | 216 | 3a0501s02 Type II (General) Secretory Pathway (IIS | 97.45 | |
| cd03256 | 241 | ABC_PhnC_transporter ABC-type phosphate/phosphonat | 97.45 | |
| cd03263 | 220 | ABC_subfamily_A The ABCA subfamily mediates the tr | 97.45 | |
| PRK09493 | 240 | glnQ glutamine ABC transporter ATP-binding protein | 97.45 | |
| PRK13547 | 272 | hmuV hemin importer ATP-binding subunit; Provision | 97.44 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 97.44 | |
| cd03226 | 205 | ABC_cobalt_CbiO_domain2 Domain II of the ABC compo | 97.44 | |
| PRK14273 | 254 | phosphate ABC transporter ATP-binding protein; Pro | 97.44 | |
| PRK11629 | 233 | lolD lipoprotein transporter ATP-binding subunit; | 97.44 | |
| TIGR02204 | 576 | MsbA_rel ABC transporter, permease/ATP-binding pro | 97.44 | |
| TIGR03740 | 223 | galliderm_ABC gallidermin-class lantibiotic protec | 97.43 | |
| PRK13543 | 214 | cytochrome c biogenesis protein CcmA; Provisional | 97.43 | |
| PRK11124 | 242 | artP arginine transporter ATP-binding subunit; Pro | 97.43 | |
| TIGR02211 | 221 | LolD_lipo_ex lipoprotein releasing system, ATP-bin | 97.43 | |
| PRK14237 | 267 | phosphate transporter ATP-binding protein; Provisi | 97.43 | |
| TIGR03522 | 301 | GldA_ABC_ATP gliding motility-associated ABC trans | 97.43 | |
| TIGR03185 | 650 | DNA_S_dndD DNA sulfur modification protein DndD. T | 97.43 | |
| cd03268 | 208 | ABC_BcrA_bacitracin_resist The BcrA subfamily repr | 97.43 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 97.43 | |
| COG0396 | 251 | sufC Cysteine desulfurase activator ATPase [Posttr | 97.43 | |
| cd03298 | 211 | ABC_ThiQ_thiamine_transporter ABC-type thiamine tr | 97.43 | |
| PRK11819 | 556 | putative ABC transporter ATP-binding protein; Revi | 97.43 | |
| TIGR03864 | 236 | PQQ_ABC_ATP ABC transporter, ATP-binding subunit, | 97.42 |
| >KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-117 Score=955.67 Aligned_cols=1024 Identities=34% Similarity=0.519 Sum_probs=767.3
Q ss_pred ccccccCCCCCCCCceEEEEEEecccccceEEEecCCceeEEEcCCCCChhHHHHHHHHHhcCCCcccccccchhhhhhc
Q 001581 7 KRLKVSRGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKR 86 (1050)
Q Consensus 7 ~~~~~~~~~~~~~~~~i~~l~l~nF~~~~~~~i~f~~~~~~I~G~NGsGKSti~~Ai~~~L~g~~~~~~r~~~~~~~i~~ 86 (1050)
+++.+..-.++|++|.|.+|+|.||.+|..+++.|+|.+|+|+||||||||||+||||+||||.|...||+.++.+||++
T Consensus 6 ~~~~l~~~~~sf~~GsIvrI~l~NF~Ty~~~e~~pgpsLNmIiGpNGSGKSSiVcAIcLglgG~Pk~lGRak~VgeyIK~ 85 (1072)
T KOG0979|consen 6 SDPALPLNYSSFPDGSIVRIELHNFLTYDHTEFLPGPSLNMIIGPNGSGKSSIVCAICLGLGGKPKLLGRAKKVGEYIKR 85 (1072)
T ss_pred cccccCCCcccCCCCceEEEEEeeeeeeeeeeecCCCceeeEECCCCCCchHHHHHHHHHcCCChhhccchhHHHHHHhc
Confidence 44555555688999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeEEEEEEEeCCCCceEEEEEEEecCCceeEEECCeecCHHHHHHHHHHcCcccccccccccchhhHHHhcCChHHH
Q 001581 87 GEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKL 166 (1050)
Q Consensus 87 g~~~a~v~i~~~~~~~~~~~~i~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~l~q~~~~~~~~~~~~~~ 166 (1050)
|++.|+|+|++.+ .+.+++|+|.|.+++.|.|+|||..++.++|.+++..|||+++|+|+||||++|.+|+..+|.++
T Consensus 86 G~~~g~IEI~l~~--~~e~~~ItR~I~~~k~S~y~iN~~a~t~s~i~elv~~fNIQi~NLCqFLpQDkV~EFa~L~pi~L 163 (1072)
T KOG0979|consen 86 GEDEGYIEIELKD--KDETLTITRLISRDKESKYFINDSATTKSEIEELVAHFNIQIDNLCQFLPQDKVKEFARLSPIEL 163 (1072)
T ss_pred CCccceEEEEEec--CCCceEEEEEEeecCCcceeeccchhhhHHHHHHHHHHhcccCchhhhccHHHHHHHHcCChHHH
Confidence 9999999999995 58999999999998899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCChhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhch
Q 001581 167 LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKY 246 (1050)
Q Consensus 167 ~~~~~~~~g~~~l~~~~~~l~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~l~~~~~~l~~~~~~~~~~~~l~~~~~~~~~ 246 (1050)
+..++.++|.+.+...+.+|..+..+...+...+..-...+..+++.++.+++.++.+.+.......++-+..+..|+.|
T Consensus 164 L~eTekAig~~~ll~~h~eL~~lr~~e~~Le~~~~~~~~~l~~L~~~~~~l~kdVE~~rer~~~~~~Ie~l~~k~~~v~y 243 (1072)
T KOG0979|consen 164 LVETEKAIGAEELLQYHIELMDLREDEKSLEDKLTTKTEKLNRLEDEIDKLEKDVERVRERERKKSKIELLEKKKKWVEY 243 (1072)
T ss_pred HHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchHhhHHHHHHhHHhhHHHHHHHHHHHHHHHHHHHHHhhh-hHhHHHH
Q 001581 247 DMKKAEYIAAKEQEKDAKKKLDEAANTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQ-GVQVQGK 325 (1050)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 325 (1050)
.....++...+...+.++.++..+.+...++....++++.+..+...++......+......+.....++.. ...+..+
T Consensus 244 ~~~~~ey~~~k~~~~r~k~~~r~l~k~~~pi~~~~eeLe~~~~et~~~~s~~~~~~~e~~~k~~~~~ek~~~~~~~v~~~ 323 (1072)
T KOG0979|consen 244 KKHDREYNAYKQAKDRAKKELRKLEKEIKPIEDKKEELESEKKETRSKISQKQRELNEALAKVQEKFEKLKEIEDEVEEK 323 (1072)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999988888888888888 8899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 001581 326 YKEMQELRRQEQSRQQRILKAREELAAAELDLQTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTL 405 (1050)
Q Consensus 326 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 405 (1050)
...++.+.......+..+....+.+..++..+......++...+..++..++.+.......-..+....+........++
T Consensus 324 ~~~le~lk~~~~~rq~~i~~~~k~i~~~q~el~~~~~~e~~~~~~~ei~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~l 403 (1072)
T KOG0979|consen 324 KNKLESLKKAAEKRQKRIEKAKKMILDAQAELQETEDPENPVEEDQEIMKEVLQKKSSKLRDSRQEIDAEQLKSQKLRDL 403 (1072)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCccccchhHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998888888888877776666555544433333334444444444455
Q ss_pred HHHHHHHHHhhhHHHHHHHHHhccCcccHHHHHHHHHHhhcccCCcccccceeEEeeCCcchHHHHHhhhcccccceEEe
Q 001581 406 RQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 485 (1050)
Q Consensus 406 ~~~~~~l~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~i~~~~~~~~~~ie~~l~~~~~~~~~v 485 (1050)
.....++........+..-.....++++...++.|+++++..|+..+++|+...+.+++++++.++|+++|-+.+.+|+|
T Consensus 404 ~~~kr~~~~~~~~~~~k~~~~l~~~~~d~~dAy~wlrenr~~FK~~vyeP~~m~l~~k~~~~A~~lEn~v~~~~~~~Fi~ 483 (1072)
T KOG0979|consen 404 ENKKRKLKQNSDLNRQKRYRVLRQGSSDAYDAYQWLRENRSEFKDEVYEPPIMTLNVKNAEFAKYLENFVGFNDLKAFIC 483 (1072)
T ss_pred HHHHHHHHHHhhhhhhhHHHHhccCchHHHHHHHHHHHCHHHhcccccCCceEEEecCChHHHHHHHcccCccccceeee
Confidence 55555555444443322122223345899999999999999999999999999999999999999999999999999999
Q ss_pred echhhHHHHHhhcCC--CCcceEeecCCCCCC--CCCCCChHHHHhcCccccccccccCcHHHHHHHHhhcCCcccccCC
Q 001581 486 QDAGDRDFLAKNLKP--FDVPILNYVSNESSR--KEPFQISEEMRALGISARLDQVFDAPHAVKEVLISQFGLDSSYIGS 561 (1050)
Q Consensus 486 ~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~i~~ 561 (1050)
.+.+|+..+...++. +.+..+...+..... ..|....+.+...||.+++.+++.+|+++..+||...+++. |++
T Consensus 484 ~~~eD~~lf~~~i~d~k~~vn~~~~~~~~~k~~d~~p~~sre~l~~lGF~gyls~f~~~p~~vm~~Lc~~~~ih~--IPv 561 (1072)
T KOG0979|consen 484 CDSEDYLLFVKKIKDEKWRVNASEVIPREKKYADKIPAQSREELKRLGFEGYLSNFIEAPEPVMSYLCNVSKIHR--IPV 561 (1072)
T ss_pred echHHHHHHHHHhhhcceeeeceeccccccccccCCCccCHHHHHhcChHHHhhhhhcCcHHHHHHHHHhccccc--ccc
Confidence 999999999887776 333333222222211 11455567788999999999999999999999999999999 444
Q ss_pred CcchhhhhHhhhcCcceEEcCCceEEEEeeccCC-------------ccceeeecccCCccccccCChH-HHHHHHHHHH
Q 001581 562 KETDQKADNVAKLGILDFWTPENHYRWSISRYGG-------------HVSASVEPVNQSRLLLCSVDGN-EIERLRSKKK 627 (1050)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-------------~~t~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~ 627 (1050)
...++....+.. ...+-+++|.+......||+ .++...+.+....++++..... ........+.
T Consensus 562 s~~~~~e~~~~~--~~~~r~~~~~~~~~~~i~g~~~~~i~~S~ygs~~v~~~~~~lk~~~f~~~~~~l~~~~~~~ee~~~ 639 (1072)
T KOG0979|consen 562 SKREVEEAIVEV--LQNIRQPNGSVFLKRNIAGGRSKSIKKSAYGSRQVITRNDPLKSRNFFSVSPVLEELDNRIEEEIQ 639 (1072)
T ss_pred CcccccHHHHHH--HhccccCCCchhHHHHhhcCchhhhhhhccccceeeecCCcchhhhhhccchHHHHHHHHHHHHHH
Confidence 443333222221 11333344443232222222 1222222222223333331111 1111222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccHHHHHHHHH
Q 001581 628 KLEESVDELEESLKSMQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLV 706 (1050)
Q Consensus 628 ~l~~~~~~l~~~l~~l~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~l~~~l~~~~~~l~~l~~~-~~~~~~~~~l~ 706 (1050)
.+..++......+..++.+.......+......+..+......+...+...+.+...++..+..+... ..+... ..
T Consensus 640 ~~~~~~~~~~~~~r~lee~~~k~~k~le~~~~~~~~~~~er~~~~~~~~~~~~r~~~ie~~~~~l~~qkee~~~~---~~ 716 (1072)
T KOG0979|consen 640 KLKAEIDIRSSTLRELEEKKQKERKELEEEQKKLKLLKRERTKLNSELKSYQQRKERIENLVVDLDRQEEEYAAS---EA 716 (1072)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HH
Confidence 33333333333333333333333333333333333332222222222222222222222111111100 000000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----HH--HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001581 707 DQAADLNIQQFKYAIEIKNLLVEIV-----SC--KWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEV 779 (1050)
Q Consensus 707 ~~~~~l~~~~~~~~~~~~~l~~~~~-----~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 779 (1050)
..+..............-.+...+. .. ...+.......-+++..+...+..+..+.+....++..+..++...
T Consensus 717 ~~I~~~~~~~~~~~~~~~~~~~k~~e~~i~~~~~~~~~~~s~~~~iea~~~i~~~e~~i~~~~~~~~~lk~a~~~~k~~a 796 (1072)
T KOG0979|consen 717 KKILDTEDMRIQSIRWHLELTDKHKEIGIKEKNESSYMARSNKNNIEAERKIEKLEDNISFLEAREDLLKTALEDKKKEA 796 (1072)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0011111100000000000000000 00 0000111111112223333333333333333333333333333333
Q ss_pred HHHH--HHHHHHHHHHHHhhcCCh----HHHHHHhcccCCHHHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHH
Q 001581 780 EHCR--KHLSDAKRQAESIAFITP----ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLS 853 (1050)
Q Consensus 780 ~~~~--~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~i~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~l~ 853 (1050)
.... ..+..+...+........ .+..++.+.|.+..++...|..-......+-++|+.+.++|+....++..+.
T Consensus 797 ~~~~~~~~~~t~~~~~~s~~~~~~ek~~~~~~e~~e~p~t~~eld~~I~~e~t~~~~~~n~ne~~vq~y~~r~~el~~l~ 876 (1072)
T KOG0979|consen 797 AEKRKEQSLQTLKREIMSPATNKIEKSLVLMKELAEEPTTMDELDQAITDELTRALKFENVNEDAVQQYEVREDELRELE 876 (1072)
T ss_pred HhcccchhHHHhhhccccccccchhhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 3322 122222222211111111 2455778889999999999988877666777899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCcceEEEeecCCCcccccceEEEEEecCCCCccc
Q 001581 854 TKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEV 933 (1050)
Q Consensus 854 ~~~~~l~~~~~~l~~~i~~l~~~~~~~~~~~~~~i~~~f~~~f~~l~~~g~~~l~~~~~~~~~~~l~i~v~~~~~~~~~~ 933 (1050)
..+......+..+.+.+......|.+.+.+++..|+.+|+.+|+.+++.|++.|+++|.|++.|||.|+|+||++++++.
T Consensus 877 ~~~~~~~~~le~i~~kl~~~ke~w~~~le~~V~~In~~Fs~~F~~mg~aGeV~L~~~~~DydkwgI~ImVkFR~s~~L~~ 956 (1072)
T KOG0979|consen 877 TKLEKLSEDLERIKDKLSDVKEVWLPKLEEMVEQINERFSQLFSSMGCAGEVSLEVNPLDYDKWGIMIMVKFRDSEGLKV 956 (1072)
T ss_pred hhhhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCceEEeccCcccHhHhceEEEEEEccCccccc
Confidence 99999999999999999999999999999999999999999999999999999998889999999999999999999999
Q ss_pred ccccccCchhHHHHHHHHHHHhcccCCCCceEeeccccCCChHhHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCC
Q 001581 934 LSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEA 1013 (1050)
Q Consensus 934 ~~~~~lSGGErs~~~lall~al~~~~~~Pf~vlDEid~~lD~~n~~~~~~~l~~~~~~~~~~Q~i~iTp~~l~~l~~~~~ 1013 (1050)
|+.+.+||||||++|+.||+|||.++||||||+|||++||||.|.++||+.|+..+|..+.+|||+|||++|+||.|+.+
T Consensus 957 L~sh~QSGGERSVSTiLYLlALQ~l~~~PFRvVDEINQGMDp~NER~Vh~~mV~~ac~entsQyFliTPKLLpgL~Ysen 1036 (1072)
T KOG0979|consen 957 LDSHRQSGGERSVSTILYLLALQELTPAPFRVVDEINQGMDPRNERKVHDIMVNMACKENTSQYFLITPKLLPGLDYSEN 1036 (1072)
T ss_pred ccccccCCcchHHHHHHHHHHHhhccCCCeeehhhhhcCCCchhHHHHHHHHHHHhhcCCCcceEEecchhcCCCChhhc
Confidence 99999999999999999999999999999999999999999999999999999999988999999999999999999999
Q ss_pred eEEEEEecCCCCCCCCCCCChhhhHh
Q 001581 1014 CSILNIMNGPWIEQPSKVWSSGECWG 1039 (1050)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1050)
|+|+|+|||||++.+.+.|.++..++
T Consensus 1037 m~Il~v~ng~~~~~p~~~~~~~~f~~ 1062 (1072)
T KOG0979|consen 1037 MKILCVMNGPWIAEPSHTWTSAKFDA 1062 (1072)
T ss_pred ceEEEEecCCcCCCCccCchHHHHHH
Confidence 99999999999999999999999886
|
|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PRK01156 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >PRK10246 exonuclease subunit SbcC; Provisional | Back alignment and domain information |
|---|
| >COG4717 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR00618 sbcc exonuclease SbcC | Back alignment and domain information |
|---|
| >PF13514 AAA_27: AAA domain | Back alignment and domain information |
|---|
| >PRK10869 recombination and repair protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02680 conserved hypothetical protein TIGR02680 | Back alignment and domain information |
|---|
| >KOG0962 consensus DNA repair protein RAD50, ABC-type ATPase/SMC superfamily [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >COG0497 RecN ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD | Back alignment and domain information |
|---|
| >PF02463 SMC_N: RecF/RecN/SMC N terminal domain; InterPro: IPR003395 This domain is found at the N terminus of structural maintenance of chromosomes (SMC) proteins, which function together with other proteins in a range of chromosomal transactions, including chromosome condensation, sister-chromatid cohesion, recombination, DNA repair and epigenetic silencing of gene expression [] | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR00634 recN DNA repair protein RecN | Back alignment and domain information |
|---|
| >COG4913 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >cd03273 ABC_SMC2_euk Eukaryotic SMC2 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >cd03275 ABC_SMC1_euk Eukaryotic SMC1 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >cd03242 ABC_RecF RecF is a recombinational DNA repair ATPase that maintains replication in the presence of DNA damage | Back alignment and domain information |
|---|
| >PRK00064 recF recombination protein F; Reviewed | Back alignment and domain information |
|---|
| >cd03241 ABC_RecN RecN ATPase involved in DNA repair; ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules | Back alignment and domain information |
|---|
| >PRK14079 recF recombination protein F; Provisional | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >cd03277 ABC_SMC5_euk Eukaryotic SMC5 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >TIGR00634 recN DNA repair protein RecN | Back alignment and domain information |
|---|
| >cd03272 ABC_SMC3_euk Eukaryotic SMC3 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR00611 recf recF protein | Back alignment and domain information |
|---|
| >COG1195 RecF Recombinational DNA repair ATPase (RecF pathway) [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >cd03239 ABC_SMC_head The structural maintenance of chromosomes (SMC) proteins are essential for successful chromosome transmission during replication and segregation of the genome in all organisms | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >PF13555 AAA_29: P-loop containing region of AAA domain | Back alignment and domain information |
|---|
| >PF13476 AAA_23: AAA domain; PDB: 3AV0_B 3AUY_B 3AUX_A 2O5V_A 3QG5_B 3QF7_A 3THO_A | Back alignment and domain information |
|---|
| >cd03276 ABC_SMC6_euk Eukaryotic SMC6 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains | Back alignment and domain information |
|---|
| >KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >cd03240 ABC_Rad50 The catalytic domains of Rad50 are similar to the ATP-binding cassette of ABC transporters, but are not associated with membrane-spanning domains | Back alignment and domain information |
|---|
| >cd03279 ABC_sbcCD SbcCD and other Mre11/Rad50 (MR) complexes are implicated in the metabolism of DNA ends | Back alignment and domain information |
|---|
| >KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >COG3096 MukB Uncharacterized protein involved in chromosome partitioning [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd03278 ABC_SMC_barmotin Barmotin is a tight junction-associated protein expressed in rat epithelial cells which is thought to have an important regulatory role in tight junction barrier function | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >cd03277 ABC_SMC5_euk Eukaryotic SMC5 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains | Back alignment and domain information |
|---|
| >cd03274 ABC_SMC4_euk Eukaryotic SMC4 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains | Back alignment and domain information |
|---|
| >COG3950 Predicted ATP-binding protein involved in virulence [General function prediction only] | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >cd03227 ABC_Class2 ABC-type Class 2 contains systems involved in cellular processes other than transport | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >PF13166 AAA_13: AAA domain | Back alignment and domain information |
|---|
| >PRK01156 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >cd03276 ABC_SMC6_euk Eukaryotic SMC6 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains | Back alignment and domain information |
|---|
| >PF11398 DUF2813: Protein of unknown function (DUF2813); InterPro: IPR022602 This entry contains YbjD from Escherichia coli (strain K12), which is a conserved protein with a nucleotide triphosphate binding domain | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >COG5293 Predicted ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >PF04310 MukB: MukB N-terminal; InterPro: IPR007406 This is the N-terminal region of MukB | Back alignment and domain information |
|---|
| >COG3593 Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >COG1106 Predicted ATPases [General function prediction only] | Back alignment and domain information |
|---|
| >PF13175 AAA_15: AAA ATPase domain | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >TIGR00611 recf recF protein | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >cd03278 ABC_SMC_barmotin Barmotin is a tight junction-associated protein expressed in rat epithelial cells which is thought to have an important regulatory role in tight junction barrier function | Back alignment and domain information |
|---|
| >COG4637 Predicted ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >cd03239 ABC_SMC_head The structural maintenance of chromosomes (SMC) proteins are essential for successful chromosome transmission during replication and segregation of the genome in all organisms | Back alignment and domain information |
|---|
| >PF13166 AAA_13: AAA domain | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >cd03275 ABC_SMC1_euk Eukaryotic SMC1 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains | Back alignment and domain information |
|---|
| >COG3910 Predicted ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd00267 ABC_ATPase ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules | Back alignment and domain information |
|---|
| >cd03273 ABC_SMC2_euk Eukaryotic SMC2 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains | Back alignment and domain information |
|---|
| >PRK00064 recF recombination protein F; Reviewed | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >cd03227 ABC_Class2 ABC-type Class 2 contains systems involved in cellular processes other than transport | Back alignment and domain information |
|---|
| >COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >cd03241 ABC_RecN RecN ATPase involved in DNA repair; ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules | Back alignment and domain information |
|---|
| >COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >cd03272 ABC_SMC3_euk Eukaryotic SMC3 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains | Back alignment and domain information |
|---|
| >cd03240 ABC_Rad50 The catalytic domains of Rad50 are similar to the ATP-binding cassette of ABC transporters, but are not associated with membrane-spanning domains | Back alignment and domain information |
|---|
| >COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd03274 ABC_SMC4_euk Eukaryotic SMC4 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains | Back alignment and domain information |
|---|
| >PF13558 SbcCD_C: Putative exonuclease SbcCD, C subunit; PDB: 3QG5_B 3QF7_A 3THO_A 3EUK_H 3EUJ_A 3AV0_B 3AUY_B 3AUX_A | Back alignment and domain information |
|---|
| >COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >COG0396 sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter | Back alignment and domain information |
|---|
| >cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters | Back alignment and domain information |
|---|
| >COG4674 Uncharacterized ABC-type transport system, ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] | Back alignment and domain information |
|---|
| >COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR01166 cbiO cobalt transport protein ATP-binding subunit | Back alignment and domain information |
|---|
| >cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota | Back alignment and domain information |
|---|
| >PRK14079 recF recombination protein F; Provisional | Back alignment and domain information |
|---|
| >cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup | Back alignment and domain information |
|---|
| >cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient | Back alignment and domain information |
|---|
| >TIGR02680 conserved hypothetical protein TIGR02680 | Back alignment and domain information |
|---|
| >cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance | Back alignment and domain information |
|---|
| >cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity | Back alignment and domain information |
|---|
| >cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively | Back alignment and domain information |
|---|
| >cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity | Back alignment and domain information |
|---|
| >TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor | Back alignment and domain information |
|---|
| >TIGR02673 FtsE cell division ATP-binding protein FtsE | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment | Back alignment and domain information |
|---|
| >TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein | Back alignment and domain information |
|---|
| >PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins | Back alignment and domain information |
|---|
| >PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea | Back alignment and domain information |
|---|
| >cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export | Back alignment and domain information |
|---|
| >COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] | Back alignment and domain information |
|---|
| >PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota | Back alignment and domain information |
|---|
| >TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D | Back alignment and domain information |
|---|
| >COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >COG4938 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters | Back alignment and domain information |
|---|
| >cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds | Back alignment and domain information |
|---|
| >cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters | Back alignment and domain information |
|---|
| >TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component | Back alignment and domain information |
|---|
| >PRK14245 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake | Back alignment and domain information |
|---|
| >COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain | Back alignment and domain information |
|---|
| >cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos) | Back alignment and domain information |
|---|
| >cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system | Back alignment and domain information |
|---|
| >cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively | Back alignment and domain information |
|---|
| >cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP | Back alignment and domain information |
|---|
| >TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA | Back alignment and domain information |
|---|
| >PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional | Back alignment and domain information |
|---|
| >cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters | Back alignment and domain information |
|---|
| >PRK13540 cytochrome c biogenesis protein CcmA; Provisional | Back alignment and domain information |
|---|
| >cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE) | Back alignment and domain information |
|---|
| >cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules | Back alignment and domain information |
|---|
| >PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional | Back alignment and domain information |
|---|
| >COG5293 Predicted ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK13543 cytochrome c biogenesis protein CcmA; Provisional | Back alignment and domain information |
|---|
| >cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules | Back alignment and domain information |
|---|
| >PRK11248 tauB taurine transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine | Back alignment and domain information |
|---|
| >cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane | Back alignment and domain information |
|---|
| >PRK14247 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos) | Back alignment and domain information |
|---|
| >PRK14242 phosphate transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK14270 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin | Back alignment and domain information |
|---|
| >PRK13538 cytochrome c biogenesis protein CcmA; Provisional | Back alignment and domain information |
|---|
| >PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system | Back alignment and domain information |
|---|
| >cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB | Back alignment and domain information |
|---|
| >PRK14268 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein | Back alignment and domain information |
|---|
| >cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR) | Back alignment and domain information |
|---|
| >cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export | Back alignment and domain information |
|---|
| >COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] | Back alignment and domain information |
|---|
| >PRK14262 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >cd03238 ABC_UvrA The excision repair protein UvrA; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion | Back alignment and domain information |
|---|
| >PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional | Back alignment and domain information |
|---|
| >cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1 | Back alignment and domain information |
|---|
| >cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein | Back alignment and domain information |
|---|
| >TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group | Back alignment and domain information |
|---|
| >cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids | Back alignment and domain information |
|---|
| >PRK13539 cytochrome c biogenesis protein CcmA; Provisional | Back alignment and domain information |
|---|
| >PRK14241 phosphate transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >cd03222 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids | Back alignment and domain information |
|---|
| >PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional | Back alignment and domain information |
|---|
| >cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import | Back alignment and domain information |
|---|
| >PRK14259 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake | Back alignment and domain information |
|---|
| >PRK10908 cell division protein FtsE; Provisional | Back alignment and domain information |
|---|
| >PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK14269 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit | Back alignment and domain information |
|---|
| >TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein | Back alignment and domain information |
|---|
| >PRK11124 artP arginine transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids | Back alignment and domain information |
|---|
| >cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport | Back alignment and domain information |
|---|
| >cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE) | Back alignment and domain information |
|---|
| >PRK13651 cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E | Back alignment and domain information |
|---|
| >PRK14273 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD | Back alignment and domain information |
|---|
| >PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional | Back alignment and domain information |
|---|
| >PRK14274 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit | Back alignment and domain information |
|---|
| >PRK14240 phosphate transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C | Back alignment and domain information |
|---|
| >PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed | Back alignment and domain information |
|---|
| >TIGR01978 sufC FeS assembly ATPase SufC | Back alignment and domain information |
|---|
| >PRK14244 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK14250 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK15056 manganese/iron transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >cd03270 ABC_UvrA_I The excision repair protein UvrA domain I; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion | Back alignment and domain information |
|---|
| >PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins | Back alignment and domain information |
|---|
| >PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR02770 nickel_nikD nickel import ATP-binding protein NikD | Back alignment and domain information |
|---|
| >cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component | Back alignment and domain information |
|---|
| >PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK14239 phosphate transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK13546 teichoic acids export protein ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK14238 phosphate transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis | Back alignment and domain information |
|---|
| >PRK14271 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL | Back alignment and domain information |
|---|
| >PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit | Back alignment and domain information |
|---|
| >COG4694 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK | Back alignment and domain information |
|---|
| >cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK | Back alignment and domain information |
|---|
| >PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK14254 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional | Back alignment and domain information |
|---|
| >PRK10744 pstB phosphate transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK14253 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI | Back alignment and domain information |
|---|
| >PRK14235 phosphate transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK13541 cytochrome c biogenesis protein CcmA; Provisional | Back alignment and domain information |
|---|
| >PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed | Back alignment and domain information |
|---|
| >PRK14258 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome | Back alignment and domain information |
|---|
| >cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea | Back alignment and domain information |
|---|
| >PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK14265 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK14275 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK14255 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK14272 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK14261 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR01187 potA spermidine/putrescine ABC transporter ATP-binding subunit | Back alignment and domain information |
|---|
| >PRK14267 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional | Back alignment and domain information |
|---|
| >PRK14243 phosphate transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth | Back alignment and domain information |
|---|
| >PRK14264 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment | Back alignment and domain information |
|---|
| >TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein | Back alignment and domain information |
|---|
| >TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE | Back alignment and domain information |
|---|
| >PRK14263 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK14248 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK13548 hmuV hemin importer ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1) | Back alignment and domain information |
|---|
| >TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein | Back alignment and domain information |
|---|
| >PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors | Back alignment and domain information |
|---|
| >cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria | Back alignment and domain information |
|---|
| >PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK14266 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK14251 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK13536 nodulation factor exporter subunit NodI; Provisional | Back alignment and domain information |
|---|
| >PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional | Back alignment and domain information |
|---|
| >COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK09580 sufC cysteine desulfurase ATPase component; Reviewed | Back alignment and domain information |
|---|
| >TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein | Back alignment and domain information |
|---|
| >COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK10070 glycine betaine transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >CHL00131 ycf16 sulfate ABC transporter protein; Validated | Back alignment and domain information |
|---|
| >PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional | Back alignment and domain information |
|---|
| >COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional | Back alignment and domain information |
|---|
| >PRK13409 putative ATPase RIL; Provisional | Back alignment and domain information |
|---|
| >PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] | Back alignment and domain information |
|---|
| >PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK14256 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK14260 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >PRK03695 vitamin B12-transporter ATPase; Provisional | Back alignment and domain information |
|---|
| >PRK14252 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03271 ABC_UvrA_II The excision repair protein UvrA domain II; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion | Back alignment and domain information |
|---|
| >PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional | Back alignment and domain information |
|---|
| >TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2 | Back alignment and domain information |
|---|
| >PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional | Back alignment and domain information |
|---|
| >PRK14237 phosphate transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >PRK14236 phosphate transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed | Back alignment and domain information |
|---|
| >PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK14249 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >COG1119 ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK13536 nodulation factor exporter subunit NodI; Provisional | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >PRK13547 hmuV hemin importer ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein | Back alignment and domain information |
|---|
| >TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT | Back alignment and domain information |
|---|
| >cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D | Back alignment and domain information |
|---|
| >PRK13537 nodulation ABC transporter NodI; Provisional | Back alignment and domain information |
|---|
| >PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein | Back alignment and domain information |
|---|
| >COG4133 CcmA ABC-type transport system involved in cytochrome c biogenesis, ATPase component [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR02769 nickel_nikE nickel import ATP-binding protein NikE | Back alignment and domain information |
|---|
| >PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional | Back alignment and domain information |
|---|
| >COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd03279 ABC_sbcCD SbcCD and other Mre11/Rad50 (MR) complexes are implicated in the metabolism of DNA ends | Back alignment and domain information |
|---|
| >PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional | Back alignment and domain information |
|---|
| >PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK11144 modC molybdate transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK13633 cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK15177 Vi polysaccharide export ATP-binding protein VexC; Provisional | Back alignment and domain information |
|---|
| >PRK14257 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional | Back alignment and domain information |
|---|
| >PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional | Back alignment and domain information |
|---|
| >KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03299 ABC_ModC_like Archeal protein closely related to ModC | Back alignment and domain information |
|---|
| >PRK10762 D-ribose transporter ATP binding protein; Provisional | Back alignment and domain information |
|---|
| >COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein | Back alignment and domain information |
|---|
| >cd03242 ABC_RecF RecF is a recombinational DNA repair ATPase that maintains replication in the presence of DNA damage | Back alignment and domain information |
|---|
| >cd03236 ABC_RNaseL_inhibitor_domain1 The ATPase domain 1 of RNase L inhibitor | Back alignment and domain information |
|---|
| >PRK10851 sulfate/thiosulfate transporter subunit; Provisional | Back alignment and domain information |
|---|
| >COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >cd03291 ABCC_CFTR1 The CFTR subfamily domain 1 | Back alignment and domain information |
|---|
| >PRK10261 glutathione transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK09700 D-allose transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK13549 xylose transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA | Back alignment and domain information |
|---|
| >PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein | Back alignment and domain information |
|---|
| >cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C | Back alignment and domain information |
|---|
| >PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >cd03238 ABC_UvrA The excision repair protein UvrA; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion | Back alignment and domain information |
|---|
| >PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein | Back alignment and domain information |
|---|
| >PF06470 SMC_hinge: SMC proteins Flexible Hinge Domain; InterPro: IPR010935 This entry represents the hinge region of the SMC (Structural Maintenance of Chromosomes) family of proteins | Back alignment and domain information |
|---|
| >TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA | Back alignment and domain information |
|---|
| >PRK13409 putative ATPase RIL; Provisional | Back alignment and domain information |
|---|
| >PRK14246 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2 | Back alignment and domain information |
|---|
| >TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth | Back alignment and domain information |
|---|
| >PRK13549 xylose transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein | Back alignment and domain information |
|---|
| >cd00267 ABC_ATPase ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules | Back alignment and domain information |
|---|
| >cd03288 ABCC_SUR2 The SUR domain 2 | Back alignment and domain information |
|---|
| >PRK13539 cytochrome c biogenesis protein CcmA; Provisional | Back alignment and domain information |
|---|
| >PRK10261 glutathione transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos) | Back alignment and domain information |
|---|
| >cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component | Back alignment and domain information |
|---|
| >TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family | Back alignment and domain information |
|---|
| >PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed | Back alignment and domain information |
|---|
| >PRK13538 cytochrome c biogenesis protein CcmA; Provisional | Back alignment and domain information |
|---|
| >PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional | Back alignment and domain information |
|---|
| >PRK14247 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR00630 uvra excinuclease ABC, A subunit | Back alignment and domain information |
|---|
| >cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import | Back alignment and domain information |
|---|
| >COG1101 PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR02868 CydC thiol reductant ABC exporter, CydC subunit | Back alignment and domain information |
|---|
| >PF00005 ABC_tran: ABC transporter This structure is on hold until Dec 1999; InterPro: IPR003439 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems | Back alignment and domain information |
|---|
| >PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed | Back alignment and domain information |
|---|
| >PRK09700 D-allose transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] | Back alignment and domain information |
|---|
| >PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03290 ABCC_SUR1_N The SUR domain 1 | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein | Back alignment and domain information |
|---|
| >cd03289 ABCC_CFTR2 The CFTR subfamily domain 2 | Back alignment and domain information |
|---|
| >COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK11607 potG putrescine transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
| >PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function | Back alignment and domain information |
|---|
| >PRK10762 D-ribose transporter ATP binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK14266 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02673 FtsE cell division ATP-binding protein FtsE | Back alignment and domain information |
|---|
| >PRK11248 tauB taurine transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional | Back alignment and domain information |
|---|
| >cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively | Back alignment and domain information |
|---|
| >PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] | Back alignment and domain information |
|---|
| >PRK11176 lipid transporter ATP-binding/permease protein; Provisional | Back alignment and domain information |
|---|
| >PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional | Back alignment and domain information |
|---|
| >TIGR01192 chvA glucan exporter ATP-binding protein | Back alignment and domain information |
|---|
| >PRK14250 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR01166 cbiO cobalt transport protein ATP-binding subunit | Back alignment and domain information |
|---|
| >PRK14262 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK14274 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK14261 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional | Back alignment and domain information |
|---|
| >cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids | Back alignment and domain information |
|---|
| >TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE) | Back alignment and domain information |
|---|
| >PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >PRK14242 phosphate transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK10636 putative ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity | Back alignment and domain information |
|---|
| >cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine | Back alignment and domain information |
|---|
| >COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family | Back alignment and domain information |
|---|
| >cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules | Back alignment and domain information |
|---|
| >PRK13540 cytochrome c biogenesis protein CcmA; Provisional | Back alignment and domain information |
|---|
| >PRK14253 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK13541 cytochrome c biogenesis protein CcmA; Provisional | Back alignment and domain information |
|---|
| >PRK14245 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only] | Back alignment and domain information |
|---|
| >PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient | Back alignment and domain information |
|---|
| >cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin | Back alignment and domain information |
|---|
| >PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional | Back alignment and domain information |
|---|
| >TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein | Back alignment and domain information |
|---|
| >cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system | Back alignment and domain information |
|---|
| >cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds | Back alignment and domain information |
|---|
| >PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed | Back alignment and domain information |
|---|
| >PRK13547 hmuV hemin importer ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota | Back alignment and domain information |
|---|
| >PRK14273 phosphate ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein | Back alignment and domain information |
|---|
| >TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit | Back alignment and domain information |
|---|
| >PRK13543 cytochrome c biogenesis protein CcmA; Provisional | Back alignment and domain information |
|---|
| >PRK11124 artP arginine transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein | Back alignment and domain information |
|---|
| >PRK14237 phosphate transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA | Back alignment and domain information |
|---|
| >TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD | Back alignment and domain information |
|---|
| >cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >COG0396 sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP | Back alignment and domain information |
|---|
| >PRK11819 putative ABC transporter ATP-binding protein; Reviewed | Back alignment and domain information |
|---|
| >TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1050 | ||||
| 4i99_A | 354 | Crystal Structure Of The Smchead Bound To The C-win | 8e-06 | ||
| 1xew_X | 182 | Structural Biochemistry Of Atp-Driven Dimerization | 2e-05 | ||
| 3kta_A | 182 | Structural Basis For Adenylate Kinase Activity In A | 3e-05 | ||
| 3aux_A | 371 | Crystal Structure Of Rad50 Bound To Adp Length = 37 | 5e-05 | ||
| 1w1w_A | 430 | Sc Smc1hd:scc1-c Complex, Atpgs Length = 430 | 9e-05 | ||
| 3tho_A | 382 | Crystal Structure Of Mre11:rad50 In Its AtpADP BOUN | 4e-04 | ||
| 3kta_B | 173 | Structural Basis For Adenylate Kinase Activity In A | 7e-04 |
| >pdb|4I99|A Chain A, Crystal Structure Of The Smchead Bound To The C-winged Helix Domain Of Scpa Length = 354 | Back alignment and structure |
|
| >pdb|1XEW|X Chain X, Structural Biochemistry Of Atp-Driven Dimerization And Dna Stimulated Activation Of Smc Atpases. Length = 182 | Back alignment and structure |
| >pdb|3KTA|A Chain A, Structural Basis For Adenylate Kinase Activity In Abc Atpases Length = 182 | Back alignment and structure |
| >pdb|3AUX|A Chain A, Crystal Structure Of Rad50 Bound To Adp Length = 371 | Back alignment and structure |
| >pdb|1W1W|A Chain A, Sc Smc1hd:scc1-c Complex, Atpgs Length = 430 | Back alignment and structure |
| >pdb|3THO|A Chain A, Crystal Structure Of Mre11:rad50 In Its AtpADP BOUND STATE Length = 382 | Back alignment and structure |
| >pdb|3KTA|B Chain B, Structural Basis For Adenylate Kinase Activity In Abc Atpases Length = 173 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 86.4 bits (213), Expect = 3e-17
Identities = 111/683 (16%), Positives = 214/683 (31%), Gaps = 202/683 (29%)
Query: 267 LDEAANTLHEFSKPIEGKKQEKAILDGDCKK--------LSS------LINENSKRRMDF 312
+D K I ++ + + DCK LS ++++++
Sbjct: 7 MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR 66
Query: 313 L-----EKVDQGVQV------QGKYK----EMQELRRQEQSRQQRILKAREELAAAELDL 357
L K ++ VQ + YK ++ +RQ + ++ R+ L D
Sbjct: 67 LFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYN---DN 123
Query: 358 QTVPAYEPP-HDKIEKLGSQILEL---------G-------VQANQKRLQKSEKEKILNQ 400
Q Y KL +LEL G A + S K +
Sbjct: 124 QVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALD--VCLSYKVQCKMD 181
Query: 401 NK---LTLRQCSDRLKDMEDKNNKLLHAL------RNSGAENIFEAYCWLQQH-RHELNK 450
K L L+ C+ +E LL+ + R+ + NI +Q R L
Sbjct: 182 FKIFWLNLKNCNSPETVLEMLQK-LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS 240
Query: 451 EAYGPVLLEV--NVSNRAHANYLEDHVGHYIWKSF--------ITQDAGDRDFLAKNLKP 500
+ Y LL V NV N W +F T+ DFL
Sbjct: 241 KPYENCLL-VLLNVQNAK------------AWNAFNLSCKILLTTRFKQVTDFL-SAATT 286
Query: 501 FDVPILNYVSNESSRKEPFQISEEMRALGISAR-LDQ-VFDAPHAVKEV---LISQFGLD 555
+ + E + + LD D P V +S
Sbjct: 287 THISL-------DHHSMTLTPDE---VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIA-- 334
Query: 556 SSYIGSKETDQKADNVAKLGILDFWTPENHYRWSISRYGGHVSASVE----PVNQSRLLL 611
+ D +A D W H + + + +S+ +
Sbjct: 335 ---------ESIRDGLAT---WDNW---KHV--NCDKLTTIIESSLNVLEPAEYRKMFDR 377
Query: 612 CSVDGNEIERLRSKKKKLEESVDELEESL-----KSMQTEQRLIEDEAAK---LQKEREE 663
SV S L ++++ ++ ++ K ++K+ +E
Sbjct: 378 LSV--------------FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKE 423
Query: 664 -IINIVQIEKRKRREMENHINLRKRKLES--IEKEDDINTALAKLVDQAADLNIQQFKYA 720
I+I I + ++EN L + ++ I K D + + +DQ Y
Sbjct: 424 STISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ----------Y- 472
Query: 721 IEIKNLLVEIVSCKW-SYAEKHMASIEFDAKIRE-----LEFN-LKQ---HEKLALQASL 770
+ S+ H+ +IE ++ L+F L+Q H+ A AS
Sbjct: 473 --------------FYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASG 518
Query: 771 HYEDCKKEVEHCRKHLSDAKRQAES-----IAFITPELEKEFLEMPTTIEELEAAIQDNI 825
+ ++++ + ++ D + E + F+ P++E+ + T ++
Sbjct: 519 SILNTLQQLKFYKPYICDNDPKYERLVNAILDFL-PKIEENLICSKYT----------DL 567
Query: 826 SQANSIFFLNQNILQEYEHRQRQ 848
+ ++ ++ I +E H+Q Q
Sbjct: 568 LRI-ALMAEDEAIFEE-AHKQVQ 588
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1f2t_A RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_A* 1us8_A* Length = 149 | Back alignment and structure |
|---|
| >3auy_A DNA double-strand break repair RAD50 ATPase; DNA repair, ABC transporter ATPase domain-like; HET: DNA ADP; 2.70A {Methanocaldococcus jannaschii} PDB: 3aux_A* 3av0_B* Length = 371 | Back alignment and structure |
|---|
| >3auy_A DNA double-strand break repair RAD50 ATPase; DNA repair, ABC transporter ATPase domain-like; HET: DNA ADP; 2.70A {Methanocaldococcus jannaschii} PDB: 3aux_A* 3av0_B* Length = 371 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1w1w_A Structural maintenance of chromosome 1; cohesin, chromosome segregation, cell adhesion, kleisin, MIT cell cycle; HET: ATG; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.12 Length = 430 | Back alignment and structure |
|---|
| >1w1w_A Structural maintenance of chromosome 1; cohesin, chromosome segregation, cell adhesion, kleisin, MIT cell cycle; HET: ATG; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.12 Length = 430 | Back alignment and structure |
|---|
| >3qks_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATPase, exonuclease, endonucle binding, DNA binding; HET: DNA; 2.10A {Pyrococcus furiosus} PDB: 3qkr_A* Length = 203 | Back alignment and structure |
|---|
| >3qkt_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATP binding, DNA bindi MRE11, replication; HET: DNA ANP; 1.90A {Pyrococcus furiosus} PDB: 3qku_A* 1ii8_A 3qks_B* 3qkr_B* 1ii8_B Length = 339 | Back alignment and structure |
|---|
| >2o5v_A DNA replication and repair protein RECF; ABC ATPase, walker A motif, P-loop, signature motif, replication/recombination complex; HET: DNA; 1.61A {Deinococcus radiodurans} Length = 359 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1qhl_A Protein (cell division protein MUKB); SMC, chromosome partitioning; 2.20A {Escherichia coli} SCOP: c.37.1.12 Length = 227 | Back alignment and structure |
|---|
| >3qf7_A RAD50; ABC-ATPase, ATPase, hydrolase; HET: ANP; 1.90A {Thermotoga maritima} PDB: 3qg5_A 3tho_A* Length = 365 | Back alignment and structure |
|---|
| >1e69_A Chromosome segregation SMC protein; structural maintenance of chromosomes, coiled coil; 3.1A {Thermotoga maritima} SCOP: c.37.1.12 Length = 322 | Back alignment and structure |
|---|
| >1e69_A Chromosome segregation SMC protein; structural maintenance of chromosomes, coiled coil; 3.1A {Thermotoga maritima} SCOP: c.37.1.12 Length = 322 | Back alignment and structure |
|---|
| >2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A Length = 704 | Back alignment and structure |
|---|
| >3euj_A Chromosome partition protein MUKB, linker; MUKB, MUKE, chromosome condensation, condensin, SMC, N subunit, ABC-type ATPase, WHD, ATP-binding; HET: AGS; 3.10A {Haemophilus ducreyi} PDB: 3euk_A* Length = 483 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1050 | ||||
| d1e69a_ | 308 | c.37.1.12 (A:) Smc head domain {Thermotoga maritim | 2e-18 | |
| d1w1wa_ | 427 | c.37.1.12 (A:) Smc head domain {Baker's yeast (Sac | 4e-17 | |
| d1w1wa_ | 427 | c.37.1.12 (A:) Smc head domain {Baker's yeast (Sac | 5e-07 | |
| g1xew.1 | 329 | c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furi | 6e-15 | |
| g1ii8.1 | 369 | c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furio | 5e-13 | |
| d1qhla_ | 222 | c.37.1.12 (A:) Cell division protein MukB {Escheri | 6e-12 | |
| g1f2t.1 | 292 | c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furio | 2e-09 |
| >d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: ABC transporter ATPase domain-like domain: Smc head domain species: Thermotoga maritima [TaxId: 2336]
Score = 85.1 bits (209), Expect = 2e-18
Identities = 33/166 (19%), Positives = 71/166 (42%), Gaps = 6/166 (3%)
Query: 23 IIEIELHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIG 81
+ ++ L F +F + R+ ++GPNGSGKS+++ AI G ++ RA+
Sbjct: 3 LKKLYLKGFKSFGRPSLIGFSDRVTAIVGPNGSGKSNIIDAIKWVFGEQSKKELRASEKF 62
Query: 82 AYVKRGE----ESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITK 137
+ G +G + L + E +T+ R++ ++ ++ NG V ++ +
Sbjct: 63 DMIFAGSENLPPAGSAYVELVFEENGEEITVARELKRTGENTYYLNGSPVRLKDIRDRFA 122
Query: 138 RFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQH 183
+ V+ + + Q ++ SP +L E+ K +
Sbjct: 123 GTGLGVDFYS-IVGQGQIDRIVNASPEELRLESSKHPTSLVPRGSY 167
|
| >d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 427 | Back information, alignment and structure |
|---|
| >d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 427 | Back information, alignment and structure |
|---|
| >d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]} Length = 222 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1050 | |||
| d1w1wa_ | 427 | Smc head domain {Baker's yeast (Saccharomyces cere | 99.95 | |
| g1xew.1 | 329 | Smc head domain {Pyrococcus furiosus [TaxId: 2261] | 99.89 | |
| d1e69a_ | 308 | Smc head domain {Thermotoga maritima [TaxId: 2336] | 99.86 | |
| g1ii8.1 | 369 | Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 99.8 | |
| d1w1wa_ | 427 | Smc head domain {Baker's yeast (Saccharomyces cere | 99.79 | |
| g1f2t.1 | 292 | Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 99.71 | |
| d1qhla_ | 222 | Cell division protein MukB {Escherichia coli [TaxI | 99.5 | |
| g1ii8.1 | 369 | Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 99.06 | |
| d1e69a_ | 308 | Smc head domain {Thermotoga maritima [TaxId: 2336] | 99.03 | |
| g1xew.1 | 329 | Smc head domain {Pyrococcus furiosus [TaxId: 2261] | 98.96 | |
| g1f2t.1 | 292 | Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 98.7 | |
| d3b60a1 | 253 | Multidrug resistance ABC transporter MsbA, C-termi | 98.21 | |
| d1gxja_ | 161 | Smc hinge domain {Thermotoga maritima [TaxId: 2336 | 98.19 | |
| d2pmka1 | 241 | Haemolysin B ATP-binding protein {Escherichia coli | 98.12 | |
| d1l2ta_ | 230 | MJ0796 {Archaeon Methanococcus jannaschii [TaxId: | 98.06 | |
| d2hyda1 | 255 | Putative multidrug export ATP-binding/permease pro | 98.03 | |
| d1g6ha_ | 254 | MJ1267 {Archaeon Methanococcus jannaschii [TaxId: | 97.82 | |
| d1jj7a_ | 251 | Peptide transporter Tap1, C-terminal ABC domain {H | 97.77 | |
| d2awna2 | 232 | Maltose transport protein MalK, N-terminal domain | 97.75 | |
| d1mv5a_ | 242 | Multidrug resistance ABC transporter LmrA, C-termi | 97.73 | |
| d1v43a3 | 239 | Hypothetical protein PH0022, N-terminal domain {Py | 97.66 | |
| d1b0ua_ | 258 | ATP-binding subunit of the histidine permease {Sal | 97.65 | |
| d1sgwa_ | 200 | Putative ABC transporter PF0895 {Pyrococcus furios | 97.64 | |
| d1ji0a_ | 240 | Branched chain aminoacid ABC transporter {Thermoto | 97.63 | |
| d1vpla_ | 238 | Putative ABC transporter TM0544 {Thermotoga mariti | 97.61 | |
| d3dhwc1 | 240 | Methionine import ATP-binding protein MetN {Escher | 97.52 | |
| d1g2912 | 240 | Maltose transport protein MalK, N-terminal domain | 97.52 | |
| d2onka1 | 240 | Molybdate/tungstate import ATP-binding protein Wtp | 97.51 | |
| d1v43a3 | 239 | Hypothetical protein PH0022, N-terminal domain {Py | 97.47 | |
| d1l7vc_ | 231 | ABC transporter involved in vitamin B12 uptake, Bt | 97.43 | |
| d1oxxk2 | 242 | Glucose transport protein GlcV, N-terminal domain | 97.43 | |
| d1r0wa_ | 281 | Cystic fibrosis transmembrane conductance regulato | 97.43 | |
| d2awna2 | 232 | Maltose transport protein MalK, N-terminal domain | 97.42 | |
| d2onka1 | 240 | Molybdate/tungstate import ATP-binding protein Wtp | 97.38 | |
| d1sgwa_ | 200 | Putative ABC transporter PF0895 {Pyrococcus furios | 97.36 | |
| d1vpla_ | 238 | Putative ABC transporter TM0544 {Thermotoga mariti | 97.36 | |
| d3d31a2 | 229 | Sulfate/molybdate ABC transporter, ATP-binding pro | 97.28 | |
| d1g2912 | 240 | Maltose transport protein MalK, N-terminal domain | 97.27 | |
| d1b0ua_ | 258 | ATP-binding subunit of the histidine permease {Sal | 97.22 | |
| d1ji0a_ | 240 | Branched chain aminoacid ABC transporter {Thermoto | 97.2 | |
| d1g6ha_ | 254 | MJ1267 {Archaeon Methanococcus jannaschii [TaxId: | 97.16 | |
| d3d31a2 | 229 | Sulfate/molybdate ABC transporter, ATP-binding pro | 97.05 | |
| d1l2ta_ | 230 | MJ0796 {Archaeon Methanococcus jannaschii [TaxId: | 96.95 | |
| d1l7vc_ | 231 | ABC transporter involved in vitamin B12 uptake, Bt | 96.91 | |
| d1jj7a_ | 251 | Peptide transporter Tap1, C-terminal ABC domain {H | 96.87 | |
| d3dhwc1 | 240 | Methionine import ATP-binding protein MetN {Escher | 96.84 | |
| d1mv5a_ | 242 | Multidrug resistance ABC transporter LmrA, C-termi | 96.83 | |
| d1oxxk2 | 242 | Glucose transport protein GlcV, N-terminal domain | 96.68 | |
| d3b60a1 | 253 | Multidrug resistance ABC transporter MsbA, C-termi | 96.61 | |
| d2pmka1 | 241 | Haemolysin B ATP-binding protein {Escherichia coli | 96.44 | |
| d1r0wa_ | 281 | Cystic fibrosis transmembrane conductance regulato | 96.37 | |
| d2hyda1 | 255 | Putative multidrug export ATP-binding/permease pro | 96.34 | |
| d1ye8a1 | 178 | Hypothetical kinase-like protein Aq_1292 {Aquifex | 95.87 | |
| d1ewqa2 | 224 | DNA repair protein MutS, the C-terminal domain {Th | 95.73 | |
| d1wb9a2 | 234 | DNA repair protein MutS, the C-terminal domain {Es | 95.72 | |
| d2i3ba1 | 189 | Cancer-related NTPase, C1orf57 {Human (Homo sapien | 94.12 | |
| d1np6a_ | 170 | Molybdopterin-guanine dinucleotide biosynthesis pr | 93.81 | |
| d1p9ra_ | 401 | Extracellular secretion NTPase EpsE {Vibrio choler | 93.21 | |
| d1znwa1 | 182 | Guanylate kinase {Mycobacterium tuberculosis [TaxI | 92.83 | |
| d1knqa_ | 171 | Gluconate kinase {Escherichia coli [TaxId: 562]} | 92.37 | |
| d1zp6a1 | 176 | Hypothetical protein Atu3015 {Agrobacterium tumefa | 92.37 | |
| d1lw7a2 | 192 | Transcriptional regulator NadR, ribosylnicotinamid | 92.15 | |
| d1qhxa_ | 178 | Chloramphenicol phosphotransferase {Streptomyces v | 92.02 | |
| d1yrba1 | 244 | ATP(GTP)-binding protein PAB0955 {Pyrococcus abyss | 91.84 | |
| d2bdta1 | 176 | Hypothetical protein BH3686 {Bacillus halodurans [ | 91.59 | |
| d1gvnb_ | 273 | Plasmid maintenance system epsilon/zeta, toxin zet | 91.16 | |
| d1xjca_ | 165 | Molybdopterin-guanine dinucleotide biosynthesis pr | 90.99 | |
| d1khta_ | 190 | Adenylate kinase {Archaeon Methanococcus voltae [T | 90.81 | |
| d1s96a_ | 205 | Guanylate kinase {Escherichia coli [TaxId: 562]} | 90.73 | |
| d1lv7a_ | 256 | AAA domain of cell division protein FtsH {Escheric | 90.55 | |
| d1ls1a2 | 207 | GTPase domain of the signal sequence recognition p | 90.55 | |
| d1sxja2 | 253 | Replication factor C1 {Baker's yeast (Saccharomyce | 90.44 | |
| d1y63a_ | 174 | Probable kinase LmjF30.1890 {Leishmania major [Tax | 90.36 | |
| d1kgda_ | 178 | Guanylate kinase-like domain of Cask {Human (Homo | 90.34 | |
| d1r7ra3 | 265 | Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu | 90.28 | |
| d2qy9a2 | 211 | GTPase domain of the signal recognition particle r | 90.17 | |
| d1okkd2 | 207 | GTPase domain of the signal recognition particle r | 90.16 | |
| d1vmaa2 | 213 | GTPase domain of the signal recognition particle r | 90.15 | |
| d1rkba_ | 173 | Adenylate kinase {Human (Homo sapiens), isoenzyme | 89.58 | |
| d1sxje2 | 252 | Replication factor C5 {Baker's yeast (Saccharomyce | 89.58 | |
| d1u0la2 | 225 | Probable GTPase EngC (YjeQ), C-terminal domain {Th | 89.57 | |
| d1kaga_ | 169 | Shikimate kinase (AroK) {Escherichia coli [TaxId: | 89.56 | |
| d1nksa_ | 194 | Adenylate kinase {Archaeon Sulfolobus acidocaldari | 89.42 | |
| d1lvga_ | 190 | Guanylate kinase {Mouse (Mus musculus) [TaxId: 100 | 89.41 | |
| d1yj5a2 | 172 | 5' polynucleotide kinase-3' phosphatase, C-termina | 89.38 | |
| d1uj2a_ | 213 | Uridine-cytidine kinase 2 {Human (Homo sapiens) [T | 89.38 | |
| d1gkya_ | 186 | Guanylate kinase {Baker's yeast (Saccharomyces cer | 89.34 | |
| d1ly1a_ | 152 | Polynucleotide kinase, kinase domain {Bacteriophag | 89.29 | |
| d1m8pa3 | 183 | ATP sulfurylase C-terminal domain {Fungus (Penicil | 89.21 | |
| d1e32a2 | 258 | Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu | 89.09 | |
| d1iqpa2 | 231 | Replication factor C {Archaeon Pyrococcus furiosus | 88.98 | |
| d2p67a1 | 327 | LAO/AO transport system kinase ArgK {Escherichia c | 88.67 | |
| d1j8yf2 | 211 | GTPase domain of the signal sequence recognition p | 88.49 | |
| d1qf9a_ | 194 | UMP/CMP kinase {Dictyostelium discoideum [TaxId: 4 | 88.39 | |
| d1rz3a_ | 198 | Hypothetical protein rbstp0775 {Bacillus stearothe | 88.33 | |
| d1fnna2 | 276 | CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T | 88.18 | |
| d1sxjd2 | 237 | Replication factor C2 {Baker's yeast (Saccharomyce | 88.0 | |
| d1sxjb2 | 224 | Replication factor C4 {Baker's yeast (Saccharomyce | 87.79 | |
| d1in4a2 | 238 | Holliday junction helicase RuvB {Thermotoga mariti | 87.54 | |
| d2iyva1 | 165 | Shikimate kinase (AroK) {Mycobacterium tuberculosi | 87.45 | |
| d1bifa1 | 213 | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphata | 87.0 | |
| d1g6oa_ | 323 | Hexameric traffic ATPase, HP0525 {Helicobacter pyl | 86.97 | |
| d1sxjc2 | 227 | Replication factor C3 {Baker's yeast (Saccharomyce | 86.93 | |
| d1e6ca_ | 170 | Shikimate kinase (AroK) {Erwinia chrysanthemi [Tax | 86.86 | |
| d1ixza_ | 247 | AAA domain of cell division protein FtsH {Thermus | 86.48 | |
| d1t9ha2 | 231 | Probable GTPase EngC (YjeQ), C-terminal domain {Ba | 86.39 | |
| d1viaa_ | 161 | Shikimate kinase (AroK) {Campylobacter jejuni [Tax | 86.38 | |
| d1teva_ | 194 | UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606] | 86.31 | |
| d1svia_ | 195 | Probable GTPase EngB {Bacillus subtilis [TaxId: 14 | 85.3 | |
| d1zaka1 | 189 | Adenylate kinase {Maize (Zea mays) [TaxId: 4577]} | 85.27 | |
| d3adka_ | 194 | Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]} | 85.16 | |
| d1njfa_ | 239 | delta prime subunit of DNA polymerase III, N-domai | 84.71 | |
| d1ixsb2 | 239 | Holliday junction helicase RuvB {Thermus thermophi | 84.7 | |
| d1ukza_ | 196 | Uridylate kinase {Baker's yeast (Saccharomyces cer | 84.66 | |
| d1nlfa_ | 274 | Hexameric replicative helicase repA {Escherichia c | 84.65 | |
| d1cr2a_ | 277 | Gene 4 protein (g4p, DNA primase), helicase domain | 84.31 | |
| d1uf9a_ | 191 | Dephospho-CoA kinase {Thermus thermophilus [TaxId: | 84.18 | |
| d1jjva_ | 205 | Dephospho-CoA kinase {Haemophilus influenzae [TaxI | 83.68 | |
| d1tf7a2 | 242 | Circadian clock protein KaiC {Synechococcus sp. st | 83.58 | |
| d1n0wa_ | 242 | DNA repair protein Rad51, catalytic domain {Human | 83.37 | |
| d1wf3a1 | 178 | GTPase Era, N-terminal domain {Thermus thermophilu | 83.25 | |
| d1x6va3 | 195 | Adenosine-5'phosphosulfate kinase (APS kinase) {Hu | 83.24 | |
| d1egaa1 | 179 | GTPase Era, N-terminal domain {Escherichia coli [T | 83.03 | |
| d1vhta_ | 208 | Dephospho-CoA kinase {Escherichia coli [TaxId: 562 | 83.0 | |
| d2fnaa2 | 283 | Archaeal ATPase SSO1545 {Sulfolobus solfataricus [ | 82.7 | |
| d1f6ba_ | 186 | SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: | 82.33 | |
| d1ckea_ | 225 | CMP kinase {Escherichia coli [TaxId: 562]} | 82.08 | |
| d1odfa_ | 286 | Hypothetical protein Ygr205W {Baker's yeast (Sacch | 81.93 | |
| d1ky3a_ | 175 | Rab-related protein ypt7p {Baker's yeast (Saccharo | 81.92 | |
| d2cxxa1 | 184 | GTP-binding protein engB {Pyrococcus horikoshii [T | 81.86 | |
| d1nrjb_ | 209 | Signal recognition particle receptor beta-subunit | 81.83 | |
| d1svma_ | 362 | Papillomavirus large T antigen helicase domain {Si | 81.72 | |
| d1ofha_ | 309 | HslU {Haemophilus influenzae [TaxId: 727]} | 81.63 | |
| d2ocpa1 | 241 | Deoxyguanosine kinase {Human (Homo sapiens) [TaxId | 81.54 | |
| d1mkya2 | 186 | Probable GTPase Der, N-terminal and middle domains | 81.42 | |
| d1h65a_ | 257 | Chloroplast protein translocon GTPase Toc34 {Garde | 81.21 | |
| d1kkma_ | 176 | HPr kinase HprK C-terminal domain {Lactobacillus c | 81.18 | |
| d1m7ga_ | 208 | Adenosine-5'phosphosulfate kinase (APS kinase) {Fu | 80.7 | |
| d1sq5a_ | 308 | Pantothenate kinase PanK {Escherichia coli [TaxId: | 80.67 | |
| d2fh5b1 | 207 | Signal recognition particle receptor beta-subunit | 80.55 | |
| d2qm8a1 | 323 | Metallochaperone MeaB {Methylobacterium extorquens | 80.45 | |
| d2qtvb1 | 166 | SAR1 {Baker's yeast (Saccharomyces cerevisiae) [Ta | 80.05 |
| >d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: ABC transporter ATPase domain-like domain: Smc head domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=9.5e-27 Score=215.26 Aligned_cols=154 Identities=26% Similarity=0.363 Sum_probs=132.9
Q ss_pred CEEEEEEEECCCCCC-EEEEECC-CCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCEEEEEEEEE
Q ss_conf 018899973242100-0788349-96259985999984699999998806997544433530111103985249999998
Q 001581 21 GNIIEIELHNFMTFD-HLICKPG-SRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIKISLR 98 (1050)
Q Consensus 21 m~i~~l~l~nf~~~~-~~~i~f~-~~~~~I~G~NGsGKStil~Ai~~~L~g~~~~~~r~~~~~~~i~~g~~~a~v~i~~~ 98 (1050)
|+|++|+|.||+||. .+.|+|+ +|+|+|+||||||||||++||+||||+.+.. .|+..+.++|+.|...+.+...|.
T Consensus 1 ~ki~~l~l~NFks~~~~~~i~f~~~~l~~i~G~NGsGKS~ileAi~~~lg~~~~~-~R~~~~~dli~~g~~~~~~~~~~~ 79 (427)
T d1w1wa_ 1 GRLVGLELSNFKSYRGVTKVGFGESNFTSIIGPNGSGKSNMMDAISFVLGVRSNH-LRSNILKDLIYRGVLNDENSDDYD 79 (427)
T ss_dssp CCEEEEEEESCSSCCSEEEEECTTCSEEEEECSTTSSHHHHHHHHHHHTTC----------CGGGSCCC-----------
T ss_pred CEEEEEEEECEEEECCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCC-CCCCCCHHHEECCCCCCCCEEEEE
T ss_conf 9288999949441079879758999989999999998899999999985778510-023340665246876775128987
Q ss_pred EC-----------------CCCCEEEEEEEEECCCCEEEEECCEECCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
Q ss_conf 07-----------------9984189999996499601788782329888999998828654442121132116888607
Q 001581 99 GD-----------------TKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKL 161 (1050)
Q Consensus 99 ~~-----------------~~~~~~~i~R~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~~~~ 161 (1050)
+. ..+..+.|.|.+.+++.+.|++||..++..++..++..+++...++++++.||++..|+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~i~i~r~i~~~~~~~~~in~~~~~~~~i~~~~~~~~~~~~~~~~~i~q~~~~~~~~~ 159 (427)
T d1w1wa_ 80 NEGAASSNPQSAYVKAFYQKGNKLVELMRIISRNGDTSYKIDGKTVSYKDYSIFLENENILIKAKNFLVFQGDVEQIAAQ 159 (427)
T ss_dssp --------CCEEEEEEEEEETTEEEEEEEEEETTSCEEEEETTEEECHHHHHHHHHHTTCCTTTCTTEECTTCTTHHHHS
T ss_pred EECCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHC
T ss_conf 41233444200011245305892799999972589636702764442999999998708787886524220456666640
Q ss_pred CHHHHHHHHHHHHC
Q ss_conf 96889999998619
Q 001581 162 SPVKLLEETEKAVG 175 (1050)
Q Consensus 162 ~~~~~~~~~~~~~g 175 (1050)
+|..++.+++.+.|
T Consensus 160 ~~~~~~~~le~~~~ 173 (427)
T d1w1wa_ 160 SPVELSRMFEEVSG 173 (427)
T ss_dssp CHHHHHHTC-----
T ss_pred CCCCCCCCCCCCCC
T ss_conf 65312232222333
|
| >d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1gxja_ d.215.1.1 (A:) Smc hinge domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
| >d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
| >d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
| >d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
| >d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} | Back information, alignment and structure |
|---|
| >d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
| >d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
| >d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
| >d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
| >d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]} | Back information, alignment and structure |
|---|
| >d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} | Back information, alignment and structure |
|---|
| >d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
| >d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]} | Back information, alignment and structure |
|---|
| >d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
| >d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
| >d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
| >d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
| >d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
| >d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
| >d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
| >d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
| >d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
| >d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
| >d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
| >d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]} | Back information, alignment and structure |
|---|
| >d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
| >d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
| >d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
| >d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
| >d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
| >d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
|---|
| >d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]} | Back information, alignment and structure |
|---|
| >d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
| >d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
| >d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
| >d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|
| >d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
| >d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
| >d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]} | Back information, alignment and structure |
|---|
| >d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
| >d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]} | Back information, alignment and structure |
|---|
| >d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
| >d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} | Back information, alignment and structure |
|---|
| >d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
| >d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]} | Back information, alignment and structure |
|---|
| >d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
| >d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
| >d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
| >d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
|---|
| >d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
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| >d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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