Citrus Sinensis ID: 001602


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------
MDIFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNNSQPLSRRTRLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEASVTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLASKAPSKEKSYAYRDGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRLEPASASLPNGQLDSVSSVNDAETPGVESELRELFLSLRPIRQENLIHDENKLILLASLSDSLEYVADSIERLGRATLRESNLVEESRKPHHNRSSSAPSRDLASFADEYRKLAIDCLKVLRVEMQLETIFHLQEMTSRDYLEDQDAEEPDDFIISLTSQITRRDEEMAPFIAEEKRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIALEQALAAIPSIDSEAVRRRLDRVRTYYELLNMPFEALLAFVTEHENLFTTTEYASLLKVNVPGREIPSDALDRVSEILSL
cccccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccccccccccccccHHccccccccccccccHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHcccccHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHccccHHHHcHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccHHHHHHHHHHccccccccHHHHHHHHHHHcc
ccccccccccHcHHHHHHHHHHccHHHHccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccccHHccccccccEEEEccccccccccccccccccccccEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccccccccccccccccccccccccccHcccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHcccccccccEEEEEEccccccccccccccccccccccccccccccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHccccccHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHcHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHccccHHHHHHHHcccHHHcccHHHcccccccHHHHHHHHHHHHHHHcccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHccHHHHHHHHHHHHHHHccHHHHHHHHHHccccccHHHHHHHHHHccccccccHHHHHHHHHHHcc
mdifdglpispekAYLREELARIEVswvaprfdslphVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMhemddevpTTVAVAYTtnnsqplsrrtrlkgdnqfgvhgladgshsstfdghdedgsleahdetsldglsigwlanstpdEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAqtgttglhfmkgqlrsyqlpkqkrqngislsgtllavspvsalmapMGKAQAAAKELLDSILDSVVRIFENHVVVGELLesrssrhdintpksmiadanwnpdseasvtggySIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLaskapskeksyayrdgsedgltfafrftdatisipnqgADLIrqgwsrrgtnvlqegygtaavlpEQGIYLAASIYRPVLQFTDKVASMlpqkysqlgNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAisspaafrprahtaatyvpsiekgrpVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGrhdidkllrlepasaslpngqldsvssvndaetpgvESELRELFLSLRpirqenlihdENKLILLASLSDSLEYVADSIERLGRAtlresnlveesrkphhnrsssapsrdlASFADEYRKLAIDCLKVLRVEMQLETIFHLQemtsrdyledqdaeepddFIISLTSQItrrdeemapfIAEEKRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIALEQALaaipsidsEAVRRRLDRVRTYYELLNMPFEALLAFVTEHENLFTTTEYASLLKvnvpgreipsdaLDRVSEILSL
mdifdglpispEKAYLREELARIEVSwvaprfdslPHVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKrrlgtrnkqlhqlwYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYttnnsqplsrrtrLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVgellesrssrhdintpksmiadanwnpdSEASVTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTArlaskapskeksyayrdgsedGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAIsspaafrprAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRLEPASAslpngqldsvssvNDAETPGVESELRELFLSLRPIRQENLIHDENKLILLASLSDSLEYVADSIERLGRATlresnlveesrkphhnrsssapsrdlASFADEYRKLAIDCLKVLRVEMQLETIFHLQEMTSRDYLEDQDAEEPDDFIISLTSQITRRDEEMAPFIAEEKRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIALEQALaaipsidseavrRRLDRVRTYYELLNMPFEALLAFVTEHENLFTTTEYASllkvnvpgreipsdaldrvseilsl
MDIFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNdiieevvdevvHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNNSQPLSRRTRLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEASVTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLASKAPSKEKSYAYRDGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRLEPASASLPNGQLDSVSSVNDAETPGVeselrelflslrPIRQENLIHDENKLILLASLSDSLEYVADSIERLGRATLRESNLVEESRKPHHNRSSSAPSRDLASFADEYRKLAIDCLKVLRVEMQLETIFHLQEMTSRDYLEDQDAEEPDDFIISLTSQITRRDEEMAPFIAEEKRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIALEQALAAIPSIDSEAVRRRLDRVRTYYELLNMPFEALLAFVTEHENLFTTTEYASLLKVNVPGREIPSDALDRVSEILSL
************KAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAY****************************************************GLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINS****IG****TGTTGLHFMKGQL*************ISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELL***************************SVTGGYSIGFSMTVLQSECQQLICEILRAT*********************************DGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRL******************************RELFLSLRPIRQENLIHDENKLILLASLSDSLEYVADSIERL********************************FADEYRKLAIDCLKVLRVEMQLETIFHLQEMTSR*Y**********DFIISLTSQITRRDEEMAPFIAEEKRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIALEQALAAIPSIDSEAVRRRLDRVRTYYELLNMPFEALLAFVTEHENLFTTTEYASLLKVNVP******************
********************ARIEVSWVAPRFDSLPHVV*****************QNDIIEEVVDEVVHAYHTGFNKAIQNYSQILR*************************************VTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEY************************************************************************************************DAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQ**************************************************SPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLES****************************GGYSIGFSMTVLQSECQQLICEILR********************************************************************************LPEQGIYLAASIYRPVLQFTDKV****************LAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAA*******KGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVL*************DKLLRLEP*************************SELRELFLS*RPIRQENLIHDENKLILLASLSDSLEYVADSIER*****************************DLASFADEYRKLAIDCLKVLRVEMQLETIFHLQEMTSRDYLE*QDAEEPDDFIISLTSQITRRDEEMAPFIAEEKRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIALEQALAAIPS*******RRLDRVRTYYELLNMPFEALLAFVTEHENLFTTTEYASLLKV**************VSEILSL
MDIFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNNSQPLSRRTRLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEASVTGGYSIGFSMTVLQSECQQLICEILRATP****************************DGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRLEPASASLPNGQLDSV*************ELRELFLSLRPIRQENLIHDENKLILLASLSDSLEYVADSIERLGRATLRESN*******************DLASFADEYRKLAIDCLKVLRVEMQLETIFHLQEMTSRDYLEDQDAEEPDDFIISLTSQITRRDEEMAPFIAEEKRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIALEQALAAIPSIDSEAVRRRLDRVRTYYELLNMPFEALLAFVTEHENLFTTTEYASLLKVNVPGREIPSDALDRVSEILSL
**IFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMH**********************************************************************G*LANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEASVTGGYSIGFSMTVLQSECQQLICEILRATPEAASAD************************SEDGLTFAFRFTDATI**************************GTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRLEPASASLPNGQLD**SSVNDAETPGVESELRELFLSLRPIRQENLIHDENKLILLASLSDSLEYVADSIERLGRATL*****************SSAPSRDLASFADEYRKLAIDCLKVLRVEMQLETIFHLQEMTSRDYLEDQDAEEPDDFIISLTSQITRRDEEMAPFIAEEKRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIALEQALAAIPSIDSEAVRRRLDRVRTYYELLNMPFEALLAFVTEHENLFTTTEYASLLKVNVPGREIPSDALDRVSEILSL
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MDIFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLxxxxxxxxxxxxxxxxxxxxxxxxxxxxLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNNSQPLSRRTRLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEASVTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLASKAPSKEKSYAYRDGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRLEPASASLPNGQLDSVSSVNDAETPGVESELRELFLSLRPIRQENLIHDENKLILLASLSDSLEYVADSIERLGRATLRESNLVEESRKPHHNRSSSAPSRDLASFADEYRKLAIDCLKVLRVEMQLETIFHLQEMTSRDYLEDQDAEEPDDFIISLTSQITRRDEEMAPFIAEEKRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIALEQALAAIPSIDSEAVRRRLDRVRTYYELLNMPFEALLAFVTEHENLFTTTEYASLLKVNVPGREIPSDALDRVSEILSL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1046 2.2.26 [Sep-21-2011]
Q93YU51053 Probable exocyst complex yes no 0.985 0.979 0.739 0.0
Q54P761182 Exocyst complex component yes no 0.398 0.352 0.214 3e-20
Q9VNH6985 Exocyst complex component yes no 0.399 0.424 0.239 6e-20
Q62824975 Exocyst complex component yes no 0.481 0.516 0.227 9e-18
O35382975 Exocyst complex component yes no 0.481 0.516 0.227 2e-17
Q96A65974 Exocyst complex component yes no 0.457 0.491 0.231 3e-17
Q9HE881111 Probable exocyst complex N/A no 0.117 0.110 0.290 3e-15
Q9XWS2893 Exocyst complex component yes no 0.403 0.472 0.235 3e-13
P328551065 Exocyst complex component yes no 0.186 0.183 0.228 3e-06
>sp|Q93YU5|EXOC4_ARATH Probable exocyst complex component 4 OS=Arabidopsis thaliana GN=SEC8 PE=1 SV=1 Back     alignment and function desciption
 Score = 1521 bits (3937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 788/1066 (73%), Positives = 901/1066 (84%), Gaps = 35/1066 (3%)

Query: 1    MDIFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDI 60
            M IF+GLP+  +K YLREELARI+ SW A RFDSLPHVVHILTSKDRE ++ ILK+Q+D+
Sbjct: 1    MGIFNGLPVPSDKTYLREELARIDESWAAARFDSLPHVVHILTSKDREADIHILKEQSDV 60

Query: 61   IEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQ 120
            +EEVVDEVVHAYH GFNKAIQNYSQILRLFSES E I +LK DLAEAK+ LG RNKQLHQ
Sbjct: 61   VEEVVDEVVHAYHGGFNKAIQNYSQILRLFSESTEKIGDLKHDLAEAKQSLGARNKQLHQ 120

Query: 121  LWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVG 180
            LWYRSVTLRHIISLLDQIEGIAKVP+RIEKLIA KQ+YAA+Q++ QS+LMLEREGLQTVG
Sbjct: 121  LWYRSVTLRHIISLLDQIEGIAKVPSRIEKLIADKQFYAAIQVYLQSSLMLEREGLQTVG 180

Query: 181  ALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNN 240
            ALQDVRSELTKLRG LF+K+L+DLHAHLYNRGEYSS   S++E DDEVPTT AVA +  +
Sbjct: 181  ALQDVRSELTKLRGALFFKILDDLHAHLYNRGEYSSVASSIYERDDEVPTTTAVAASRMS 240

Query: 241  SQPLSRRTR-LKGDNQFGVHGLADGSH-------SSTFDGHDEDGSLEAHDETSLDGLSI 292
            SQPLSRRTR LKGD+QFGV GL +GS+       SS+FDGHDE+ S+E HDE++ D    
Sbjct: 241  SQPLSRRTRTLKGDSQFGVRGLTNGSYRTASNDESSSFDGHDEEDSVE-HDESTADTARN 299

Query: 293  G------------WLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIIC 340
            G            WL++STPDEF+EA+RKSD PLHVKYLQT+V+CLC+LGKVAAAGAIIC
Sbjct: 300  GTDSKLLSHQLPPWLSDSTPDEFIEAVRKSDDPLHVKYLQTLVQCLCMLGKVAAAGAIIC 359

Query: 341  QRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNG 400
            Q+LRPTIHEII SKIKAH +  N S+SA  Q  ++   GLH +KGQ  +Y+L K+K QNG
Sbjct: 360  QKLRPTIHEIIISKIKAHLETTNLSKSACSQGDRSVAAGLHLIKGQSEAYRLSKEKPQNG 419

Query: 401  ISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHD 460
            IS SGT LAVSPVS LMAP GKAQAAAKELLDSILD++V+IFENHVV+GELLE ++S+HD
Sbjct: 420  ISNSGTHLAVSPVSPLMAPGGKAQAAAKELLDSILDTIVKIFENHVVIGELLEMKASQHD 479

Query: 461  INTPKSMIADANWNPDSEAS-VTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAV 519
            INTP+S+  D NWN +SEAS  TGGY+I F +TVLQSECQQLICEILRATPEAASADAA 
Sbjct: 480  INTPRSLPTDVNWNTESEASQATGGYTISFPLTVLQSECQQLICEILRATPEAASADAAA 539

Query: 520  QTARLASKAPSKEKSYAYRDGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQ 579
            QTA+LA KA         RD  EDGLTF FRFTDAT+SI NQGADLIRQGW +R  N   
Sbjct: 540  QTAKLAKKA----PKKDKRDAPEDGLTFTFRFTDATVSISNQGADLIRQGWGKRAPNASL 595

Query: 580  EGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLL 639
            EGYG+AAVLPEQGIYLAASIYRPVLQFTDK+ SMLP+K+SQL NDGLL F ENFVKDHLL
Sbjct: 596  EGYGSAAVLPEQGIYLAASIYRPVLQFTDKITSMLPKKHSQLVNDGLLTFTENFVKDHLL 655

Query: 640  PTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQ 699
            PTMFVDYRKGVQQAISS AAFRPRAHT  TY  ++EKGRP+LQGLLAID LAKEVLGWAQ
Sbjct: 656  PTMFVDYRKGVQQAISSAAAFRPRAHT-TTYTATVEKGRPILQGLLAIDLLAKEVLGWAQ 714

Query: 700  AMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRLEPASASLP 759
            AMPKFA DLVKYVQTFLERT+ERCRTSYMEAVLEK SYMLIGRHDI+KL+RL+ ASA LP
Sbjct: 715  AMPKFATDLVKYVQTFLERTFERCRTSYMEAVLEKLSYMLIGRHDIEKLMRLDAASACLP 774

Query: 760  NGQLDSVSSVNDAETPGVESELRELFLSLRPIRQENLIHDENKLILLASLSDSLEYVADS 819
            +    +VS    +E  G E EL +LFLSLRPI+Q+NLI D+NKLILLASLSDSLEYVADS
Sbjct: 775  STLGHAVSH---SEAVGTEVELSDLFLSLRPIKQDNLIRDDNKLILLASLSDSLEYVADS 831

Query: 820  IERLGRATLRESNLVEESRKPHHNRSSSAPSRDLASFADEYRKLAIDCLKVLRVEMQLET 879
            IERLG+A  R ++  E      ++R+ +A  R+LASFADEYRKLA DCLKVLRVEMQLET
Sbjct: 832  IERLGQAVPRVASQAE-----GNSRNQAASPRNLASFADEYRKLATDCLKVLRVEMQLET 886

Query: 880  IFHLQEMTSRDYLEDQDAEEPDDFIISLTSQITRRDEEMAPFIAEEKRNYIFGGICGIAA 939
            +FHLQEMT+R+YLED+DAEEPDDF+ISLTSQITRR+E MAPFI+ EKRNY+FGGI GIAA
Sbjct: 887  VFHLQEMTNREYLEDEDAEEPDDFVISLTSQITRREEGMAPFISGEKRNYVFGGISGIAA 946

Query: 940  NASIKALADMKNINLFGVQQICRNSIALEQALAAIPSIDSEAVRRRLDRVRTYYELLNMP 999
            NASIKALADM++INLFGVQQICRN+IA+EQA+AAIP ID E V++ LDRVRTY+ELLNMP
Sbjct: 947  NASIKALADMRSINLFGVQQICRNTIAVEQAMAAIPYIDGETVQQNLDRVRTYFELLNMP 1006

Query: 1000 FEALLAFVTEHENLFTTTEYASLLKVNVPGREIPSDALDRVSEILS 1045
            FEALLAF+ EH+ +FT TEY++LLKVNVPGR+ PSDA  R+ EILS
Sbjct: 1007 FEALLAFIAEHDQMFTPTEYSNLLKVNVPGRDTPSDAQSRLLEILS 1052




Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
Arabidopsis thaliana (taxid: 3702)
>sp|Q54P76|EXOC4_DICDI Exocyst complex component 4 OS=Dictyostelium discoideum GN=exoc4 PE=3 SV=1 Back     alignment and function description
>sp|Q9VNH6|EXOC4_DROME Exocyst complex component 4 OS=Drosophila melanogaster GN=sec8 PE=1 SV=3 Back     alignment and function description
>sp|Q62824|EXOC4_RAT Exocyst complex component 4 OS=Rattus norvegicus GN=Exoc4 PE=1 SV=1 Back     alignment and function description
>sp|O35382|EXOC4_MOUSE Exocyst complex component 4 OS=Mus musculus GN=Exoc4 PE=1 SV=2 Back     alignment and function description
>sp|Q96A65|EXOC4_HUMAN Exocyst complex component 4 OS=Homo sapiens GN=EXOC4 PE=1 SV=1 Back     alignment and function description
>sp|Q9HE88|SEC8_NEUCR Probable exocyst complex component sec8 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=sec-8 PE=3 SV=1 Back     alignment and function description
>sp|Q9XWS2|EXOC4_CAEEL Exocyst complex component 4 OS=Caenorhabditis elegans GN=sec-8 PE=2 SV=2 Back     alignment and function description
>sp|P32855|SEC8_YEAST Exocyst complex component SEC8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC8 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1046
2254489681076 PREDICTED: probable exocyst complex comp 0.994 0.966 0.802 0.0
2960859801084 unnamed protein product [Vitis vinifera] 0.994 0.959 0.796 0.0
3565339471066 PREDICTED: probable exocyst complex comp 0.988 0.969 0.787 0.0
3565746211065 PREDICTED: probable exocyst complex comp 0.987 0.969 0.782 0.0
2241130891084 predicted protein [Populus trichocarpa] 0.962 0.928 0.741 0.0
4494904291073 PREDICTED: probable exocyst complex comp 0.992 0.967 0.744 0.0
4494446301073 PREDICTED: probable exocyst complex comp 0.992 0.967 0.744 0.0
2240977881087 predicted protein [Populus trichocarpa] 0.973 0.936 0.725 0.0
2978338181053 hypothetical protein ARALYDRAFT_897214 [ 0.985 0.979 0.739 0.0
183988551053 exocyst complex component 4 [Arabidopsis 0.985 0.979 0.739 0.0
>gi|225448968|ref|XP_002269663.1| PREDICTED: probable exocyst complex component 4-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1771 bits (4587), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 867/1080 (80%), Positives = 956/1080 (88%), Gaps = 40/1080 (3%)

Query: 1    MDIFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDI 60
            M  FDGLPISPEK+YLRE+L+RI+ SW A RFDSLPHVVHILTSKDREGE Q LK+Q+DI
Sbjct: 1    MGTFDGLPISPEKSYLREDLSRIDESWAAARFDSLPHVVHILTSKDREGEAQFLKEQSDI 60

Query: 61   IEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQ 120
            IEEVVDEVVHAYH+GFNKAIQNYSQILRLFSESA SI  LKVDLA+AK+ LG RNKQLHQ
Sbjct: 61   IEEVVDEVVHAYHSGFNKAIQNYSQILRLFSESAASISVLKVDLADAKKLLGARNKQLHQ 120

Query: 121  LWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVG 180
            LWYRSVTLRHII+LLDQ+EGIAKVPARIEKLIA KQ+YAAVQLHAQS LMLEREGLQTVG
Sbjct: 121  LWYRSVTLRHIIALLDQVEGIAKVPARIEKLIAEKQFYAAVQLHAQSTLMLEREGLQTVG 180

Query: 181  ALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNN 240
            ALQDVRSELTKLRG++FYK+LEDLHAHLYN+GEYSSA  S+HE DDEVPTT AVA++ N+
Sbjct: 181  ALQDVRSELTKLRGIIFYKILEDLHAHLYNKGEYSSAASSIHERDDEVPTTTAVAFSMNS 240

Query: 241  SQPLSRRTR-LKGDNQFGVHGLADGSH------SSTFDGHDEDGSLEAHDETSLDGLSI- 292
            SQPLSRRTR LKGDNQFGV GL DG         S+FDGHDE+G+LE HDE +LDG +  
Sbjct: 241  SQPLSRRTRLLKGDNQFGVLGLGDGYRPGSIDGGSSFDGHDEEGALELHDEATLDGYNAI 300

Query: 293  ---------------------GWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGK 331
                                  WL+ +TPDEF+E+++KSDAPLHVKYLQTMVECLC+LGK
Sbjct: 301  TKVNGGDGSQKDIKIVSHQIPPWLSYATPDEFLESMKKSDAPLHVKYLQTMVECLCMLGK 360

Query: 332  VAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQ 391
            VAAAGA+ICQRLRPTIHEIITSKIKAHA+L+NS+RS I +AA T TTGLH++KGQL SYQ
Sbjct: 361  VAAAGAMICQRLRPTIHEIITSKIKAHAELVNSTRSGICRAAHTATTGLHYLKGQLESYQ 420

Query: 392  LPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGEL 451
             PKQKRQNGISL+GTLLAVSPVS +MAP G AQ AAKELLDSILD VVRIFENHVVVGEL
Sbjct: 421  SPKQKRQNGISLAGTLLAVSPVSPVMAPAGTAQTAAKELLDSILDIVVRIFENHVVVGEL 480

Query: 452  LESRSSRHDINTPKSMIADANWNPDSEAS-VTGGYSIGFSMTVLQSECQQLICEILRATP 510
            LES+ ++ D+NTPKS+  + NWN DSEAS VTGGYSIGFS+TVLQSECQQLICEILRATP
Sbjct: 481  LESKGTQVDMNTPKSVTVEVNWNHDSEASQVTGGYSIGFSLTVLQSECQQLICEILRATP 540

Query: 511  EAASADAAVQTARLASKAPSKEKSYAYRDGSEDGLTFAFRFTDATISIPNQGADLIRQGW 570
            EAASADA VQTARLASKAPSKEK    RD SEDGLTFAFRFTDATIS+PNQG DLIRQGW
Sbjct: 541  EAASADATVQTARLASKAPSKEK----RDRSEDGLTFAFRFTDATISVPNQGVDLIRQGW 596

Query: 571  SRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFV 630
            +RRG NVLQEGYG+AA+LPEQGIYLAASIYRPV+QFTDK+ASMLP+KYSQLGNDGLLAFV
Sbjct: 597  TRRGPNVLQEGYGSAAILPEQGIYLAASIYRPVIQFTDKIASMLPKKYSQLGNDGLLAFV 656

Query: 631  ENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFL 690
            ENFVKDH LPTMFVDYRKGVQQAISSPAAFRPR+H A+TY P +EKGRPVLQGLLAIDFL
Sbjct: 657  ENFVKDHFLPTMFVDYRKGVQQAISSPAAFRPRSHAASTYSPLVEKGRPVLQGLLAIDFL 716

Query: 691  AKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLR 750
            AKEVLGWAQAMPKFA DLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDI+KL+R
Sbjct: 717  AKEVLGWAQAMPKFAGDLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIEKLMR 776

Query: 751  LEPASASLPN--GQLDSVSSVNDAETPGVESELRELFLSLRPIRQENLIHDENKLILLAS 808
             +PASA LPN  GQ +  S+ +D +   VE EL +L LSLRPI+QENLI D+NKLILLAS
Sbjct: 777  CDPASACLPNPFGQPNMESNASDVDVE-VEMELCDLLLSLRPIKQENLIRDDNKLILLAS 835

Query: 809  LSDSLEYVADSIERLGRATLRESNLVEESRKP---HHNRSSSAPSRDLASFADEYRKLAI 865
            LSDSLEYVADSIERLG+A++R SN VEE+ K    HH ++SSAP R+LASFADEYRKLAI
Sbjct: 836  LSDSLEYVADSIERLGKASIRASNPVEENGKQKMHHHTQTSSAPPRNLASFADEYRKLAI 895

Query: 866  DCLKVLRVEMQLETIFHLQEMTSRDYLEDQDAEEPDDFIISLTSQITRRDEEMAPFIAEE 925
            DCLKVLRVEMQLETIFH+QEMTSR+YL+DQDAEEPDDFIISLT+QITRRDEEMAPF+A  
Sbjct: 896  DCLKVLRVEMQLETIFHMQEMTSREYLDDQDAEEPDDFIISLTAQITRRDEEMAPFVAGV 955

Query: 926  KRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIALEQALAAIPSIDSEAVRRR 985
            KRNYIFGGIC IAANAS+KALADMK+INLFGVQQICRNSIALEQALAAIPSIDSE V++R
Sbjct: 956  KRNYIFGGICSIAANASMKALADMKSINLFGVQQICRNSIALEQALAAIPSIDSETVQQR 1015

Query: 986  LDRVRTYYELLNMPFEALLAFVTEHENLFTTTEYASLLKVNVPGREIPSDALDRVSEILS 1045
            LD +RTYYELLNMPFEALLAF+TEHENLFT TEY +LLKV VPGREIP+DA +RVSEILS
Sbjct: 1016 LDHIRTYYELLNMPFEALLAFITEHENLFTATEYTNLLKVQVPGREIPADARERVSEILS 1075




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085980|emb|CBI31421.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356533947|ref|XP_003535519.1| PREDICTED: probable exocyst complex component 4-like [Glycine max] Back     alignment and taxonomy information
>gi|356574621|ref|XP_003555444.1| PREDICTED: probable exocyst complex component 4-like [Glycine max] Back     alignment and taxonomy information
>gi|224113089|ref|XP_002316388.1| predicted protein [Populus trichocarpa] gi|222865428|gb|EEF02559.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449490429|ref|XP_004158603.1| PREDICTED: probable exocyst complex component 4-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449444630|ref|XP_004140077.1| PREDICTED: probable exocyst complex component 4-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224097788|ref|XP_002311074.1| predicted protein [Populus trichocarpa] gi|222850894|gb|EEE88441.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297833818|ref|XP_002884791.1| hypothetical protein ARALYDRAFT_897214 [Arabidopsis lyrata subsp. lyrata] gi|297330631|gb|EFH61050.1| hypothetical protein ARALYDRAFT_897214 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18398855|ref|NP_566372.1| exocyst complex component 4 [Arabidopsis thaliana] gi|24418673|sp|Q93YU5.1|EXOC4_ARATH RecName: Full=Probable exocyst complex component 4; AltName: Full=Exocyst complex component Sec8; Short=AtSEC8 gi|16604637|gb|AAL24111.1| unknown protein [Arabidopsis thaliana] gi|26452109|dbj|BAC43144.1| unknown protein [Arabidopsis thaliana] gi|332641377|gb|AEE74898.1| exocyst complex component 4 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1046
TAIR|locus:20762491053 SEC8 "subunit of exocyst compl 0.985 0.979 0.725 0.0
UNIPROTKB|Q96A65974 EXOC4 "Exocyst complex compone 0.488 0.524 0.216 2e-34
RGD|621791975 Exoc4 "exocyst complex compone 0.508 0.545 0.212 3.7e-34
UNIPROTKB|Q62824975 Exoc4 "Exocyst complex compone 0.508 0.545 0.212 3.7e-34
ZFIN|ZDB-GENE-041210-112968 exoc4 "exocyst complex compone 0.463 0.501 0.232 6.7e-34
DICTYBASE|DDB_G02848331182 exoc4 "exocyst complex subunit 0.149 0.131 0.273 6.8e-34
UNIPROTKB|F1PMM8975 EXOC4 "Uncharacterized protein 0.488 0.524 0.214 1.4e-33
MGI|MGI:1096376975 Exoc4 "exocyst complex compone 0.508 0.545 0.206 6.9e-33
UNIPROTKB|E1BUN2976 EXOC4 "Uncharacterized protein 0.468 0.502 0.211 4.5e-32
UNIPROTKB|A6QLD1975 EXOC4 "EXOC4 protein" [Bos tau 0.462 0.496 0.213 9.7e-32
TAIR|locus:2076249 SEC8 "subunit of exocyst complex 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3840 (1356.8 bits), Expect = 0., P = 0.
 Identities = 773/1066 (72%), Positives = 884/1066 (82%)

Query:     1 MDIFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNXX 60
             M IF+GLP+  +K YLREELARI+ SW A RFDSLPHVVHILTSKDRE ++ ILK+Q+  
Sbjct:     1 MGIFNGLPVPSDKTYLREELARIDESWAAARFDSLPHVVHILTSKDREADIHILKEQSDV 60

Query:    61 XXXXXXXXXHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQ 120
                      HAYH GFNKAIQNYSQILRLFSES E I +LK DLAEAK+ LG RNKQLHQ
Sbjct:    61 VEEVVDEVVHAYHGGFNKAIQNYSQILRLFSESTEKIGDLKHDLAEAKQSLGARNKQLHQ 120

Query:   121 LWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVG 180
             LWYRSVTLRHIISLLDQIEGIAKVP+RIEKLIA KQ+YAA+Q++ QS+LMLEREGLQTVG
Sbjct:   121 LWYRSVTLRHIISLLDQIEGIAKVPSRIEKLIADKQFYAAIQVYLQSSLMLEREGLQTVG 180

Query:   181 ALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNN 240
             ALQDVRSELTKLRG LF+K+L+DLHAHLYNRGEYSS   S++E DDEVPTT AVA +  +
Sbjct:   181 ALQDVRSELTKLRGALFFKILDDLHAHLYNRGEYSSVASSIYERDDEVPTTTAVAASRMS 240

Query:   241 SQPLSRRTR-LKGDNQFGVHGLADGSH-------SSTFDGHDEDGSLEAHDETSLDGLSI 292
             SQPLSRRTR LKGD+QFGV GL +GS+       SS+FDGHDE+ S+E HDE++ D    
Sbjct:   241 SQPLSRRTRTLKGDSQFGVRGLTNGSYRTASNDESSSFDGHDEEDSVE-HDESTADTARN 299

Query:   293 G------------WLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIIC 340
             G            WL++STPDEF+EA+RKSD PLHVKYLQT+V+CLC+LGKVAAAGAIIC
Sbjct:   300 GTDSKLLSHQLPPWLSDSTPDEFIEAVRKSDDPLHVKYLQTLVQCLCMLGKVAAAGAIIC 359

Query:   341 QRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNG 400
             Q+LRPTIHEII SKIKAH +  N S+SA  Q  ++   GLH +KGQ  +Y+L K+K QNG
Sbjct:   360 QKLRPTIHEIIISKIKAHLETTNLSKSACSQGDRSVAAGLHLIKGQSEAYRLSKEKPQNG 419

Query:   401 ISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHD 460
             IS SGT LAVSPVS LMAP GKAQAAAKELLDSILD++V+IFENHVV+GELLE ++S+HD
Sbjct:   420 ISNSGTHLAVSPVSPLMAPGGKAQAAAKELLDSILDTIVKIFENHVVIGELLEMKASQHD 479

Query:   461 INTPKSMIADANWNPDSEAS-VTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAV 519
             INTP+S+  D NWN +SEAS  TGGY+I F +TVLQSECQQLICEILRATPEAASADAA 
Sbjct:   480 INTPRSLPTDVNWNTESEASQATGGYTISFPLTVLQSECQQLICEILRATPEAASADAAA 539

Query:   520 QTARLASKAPSKEKSYAYRDGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQ 579
             QTA+LA KAP K+K    RD  EDGLTF FRFTDAT+SI NQGADLIRQGW +R  N   
Sbjct:   540 QTAKLAKKAPKKDK----RDAPEDGLTFTFRFTDATVSISNQGADLIRQGWGKRAPNASL 595

Query:   580 EGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLL 639
             EGYG+AAVLPEQGIYLAASIYRPVLQFTDK+ SMLP+K+SQL NDGLL F ENFVKDHLL
Sbjct:   596 EGYGSAAVLPEQGIYLAASIYRPVLQFTDKITSMLPKKHSQLVNDGLLTFTENFVKDHLL 655

Query:   640 PTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQ 699
             PTMFVDYRKGVQQAISS AAFRPRAHT  TY  ++EKGRP+LQGLLAID LAKEVLGWAQ
Sbjct:   656 PTMFVDYRKGVQQAISSAAAFRPRAHTT-TYTATVEKGRPILQGLLAIDLLAKEVLGWAQ 714

Query:   700 AMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRLEPASASLP 759
             AMPKFA DLVKYVQTFLERT+ERCRTSYMEAVLEK SYMLIGRHDI+KL+RL+ ASA LP
Sbjct:   715 AMPKFATDLVKYVQTFLERTFERCRTSYMEAVLEKLSYMLIGRHDIEKLMRLDAASACLP 774

Query:   760 NGQLDSVSSVNDAETPGVXXXXXXXXXXXXPIRQENLIHDENKLILLASLSDSLEYVADS 819
             +    +VS    +E  G             PI+Q+NLI D+NKLILLASLSDSLEYVADS
Sbjct:   775 STLGHAVSH---SEAVGTEVELSDLFLSLRPIKQDNLIRDDNKLILLASLSDSLEYVADS 831

Query:   820 IERLGRATLRESNLVEESRKPHHNRSSSAPSRDLASFADEYRKLAIDCLKVLRVEMQLET 879
             IERLG+A  R ++  E +     +R+ +A  R+LASFADEYRKLA DCLKVLRVEMQLET
Sbjct:   832 IERLGQAVPRVASQAEGN-----SRNQAASPRNLASFADEYRKLATDCLKVLRVEMQLET 886

Query:   880 IFHLQEMTSRDYLEDQDAEEPDDFIISLTSQITRRDEEMAPFIAEEKRNYIFGGICGIAA 939
             +FHLQEMT+R+YLED+DAEEPDDF+ISLTSQITRR+E MAPFI+ EKRNY+FGGI GIAA
Sbjct:   887 VFHLQEMTNREYLEDEDAEEPDDFVISLTSQITRREEGMAPFISGEKRNYVFGGISGIAA 946

Query:   940 NASIKALADMKNINLFGVQQICRNSIALEQALAAIPSIDSEAVRRRLDRVRTYYELLNMP 999
             NASIKALADM++INLFGVQQICRN+IA+EQA+AAIP ID E V++ LDRVRTY+ELLNMP
Sbjct:   947 NASIKALADMRSINLFGVQQICRNTIAVEQAMAAIPYIDGETVQQNLDRVRTYFELLNMP 1006

Query:  1000 FEALLAFVTEHENLFTTTEYASLLKVNVPGREIPSDALDRVSEILS 1045
             FEALLAF+ EH+ +FT TEY++LLKVNVPGR+ PSDA  R+ EILS
Sbjct:  1007 FEALLAFIAEHDQMFTPTEYSNLLKVNVPGRDTPSDAQSRLLEILS 1052




GO:0000145 "exocyst" evidence=IEA;IDA
GO:0005634 "nucleus" evidence=ISM
GO:0006904 "vesicle docking involved in exocytosis" evidence=IEA
GO:0015031 "protein transport" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005515 "protein binding" evidence=IPI
GO:0009846 "pollen germination" evidence=IGI
GO:0009860 "pollen tube growth" evidence=IGI
GO:0005829 "cytosol" evidence=IDA
GO:0048354 "mucilage biosynthetic process involved in seed coat development" evidence=IMP
GO:0009506 "plasmodesma" evidence=IDA
GO:0006007 "glucose catabolic process" evidence=RCA
UNIPROTKB|Q96A65 EXOC4 "Exocyst complex component 4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|621791 Exoc4 "exocyst complex component 4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q62824 Exoc4 "Exocyst complex component 4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041210-112 exoc4 "exocyst complex component 4" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0284833 exoc4 "exocyst complex subunit 4" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|F1PMM8 EXOC4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:1096376 Exoc4 "exocyst complex component 4" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E1BUN2 EXOC4 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|A6QLD1 EXOC4 "EXOC4 protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q93YU5EXOC4_ARATHNo assigned EC number0.73920.98560.9791yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1046
pfam04048142 pfam04048, Sec8_exocyst, Sec8 exocyst complex comp 3e-42
>gnl|CDD|202865 pfam04048, Sec8_exocyst, Sec8 exocyst complex component specific domain Back     alignment and domain information
 Score =  150 bits (381), Expect = 3e-42
 Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 5/142 (3%)

Query: 15  YLREELARIEVSWVAPRFDSLPHVVHILTSKDREG-----EVQILKDQNDIIEEVVDEVV 69
            L+E L  I+  W     D    V   L   D             +     IE+ + EVV
Sbjct: 1   KLKEVLNTIKYEWPQVLSDDANPVELALQLLDDTSVGLAHRYPEFEQLKKRIEQALQEVV 60

Query: 70  HAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLR 129
           + +H GFN +I +Y +IL   + S E I++LK  L EAK+ LGTR  +L +L  RS   +
Sbjct: 61  NEHHQGFNSSIGSYHKILSSITSSQERIRQLKESLEEAKKLLGTRKPELKELNQRSQKYK 120

Query: 130 HIISLLDQIEGIAKVPARIEKL 151
            +I LLD IE + KVP ++E+L
Sbjct: 121 EMIELLDAIEELRKVPDKLEQL 142


Length = 142

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1046
KOG3691982 consensus Exocyst complex subunit Sec8 [Intracellu 100.0
PF04048142 Sec8_exocyst: Sec8 exocyst complex component speci 100.0
PF10475291 DUF2450: Protein of unknown function N-terminal do 99.22
PF10474234 DUF2451: Protein of unknown function C-terminus (D 98.4
KOG2115951 consensus Vacuolar sorting protein VPS45 [Intracel 97.97
PF15469182 Sec5: Exocyst complex component Sec5 97.62
PF06248593 Zw10: Centromere/kinetochore Zw10; InterPro: IPR00 97.58
PF04100383 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007 97.51
PF04124338 Dor1: Dor1-like family ; InterPro: IPR007255 Dor1 97.35
PF04437494 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00 97.29
KOG2176800 consensus Exocyst complex, subunit SEC15 [Intracel 96.66
PF10392132 COG5: Golgi transport complex subunit 5; InterPro: 96.07
KOG2180793 consensus Late Golgi protein sorting complex, subu 96.06
KOG2069581 consensus Golgi transport complex subunit [Intrace 95.63
PF06148133 COG2: COG (conserved oligomeric Golgi) complex com 95.31
PF04091311 Sec15: Exocyst complex subunit Sec15-like ; InterP 93.5
PF0870087 Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT te 87.42
KOG2307705 consensus Low density lipoprotein receptor [Intrac 85.15
KOG2346636 consensus Uncharacterized conserved protein [Funct 84.82
PF09763701 Sec3_C: Exocyst complex component Sec3; InterPro: 80.52
>KOG3691 consensus Exocyst complex subunit Sec8 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
Probab=100.00  E-value=9.8e-123  Score=1072.58  Aligned_cols=888  Identities=22%  Similarity=0.299  Sum_probs=660.4

Q ss_pred             CcHHHHHHhh----ccCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001602           33 DSLPHVVHIL----TSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAK  108 (1046)
Q Consensus        33 ~~~~~~l~~L----~s~~~~~~~~~l~~~~~~~~~~L~~~V~~h~~~Fn~sI~sy~~i~~~i~~sq~~i~~lk~~L~~~k  108 (1046)
                      .-+-.+++-|    +-+.|+.++++|++.|++.+.+|+++|+.|+|+|+++|.+|++|++.|+.||++|.++|++|.+||
T Consensus        30 G~lInvi~nL~~Se~~e~re~ek~~Led~Yk~~~a~Lq~lv~~H~q~~t~~i~sy~~i~s~It~~rerI~~vK~~L~~~k  109 (982)
T KOG3691|consen   30 GLLINVIRNLVGSEDTEPRETEKERLEDSYKEFGAALQELVHTHKQDFTTGISSYGEISSGITNCRERIHNVKNNLEACK  109 (982)
T ss_pred             chhhhHHHhhccCCcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3445566666    344568899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhccCchHHHHHHHHhhHHHHHHHHHHHHHHhhccHHHHHHHHhccCHHHHHHHHHHHHHHhcccCCCCccchHHHHHH
Q 001602          109 RRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSE  188 (1046)
Q Consensus       109 ~~L~~~~~~L~~L~~~s~~~~~~i~~L~~ie~l~~vP~~ie~~i~~k~y~~A~~lL~~~~~~l~~~~L~~i~aL~~lr~~  188 (1046)
                      .+|+|+|++|++||.++.+|++||++|++||++++||+|||++|++|+|++|+++|.+|+.++|++ |.+|++|+|||++
T Consensus       110 ~ll~~~rdeLqklw~~~~q~K~Vi~vL~eieEl~qvPqkie~~i~keqY~~Asdll~~~~~~lng~-L~~VEgLs~l~~e  188 (982)
T KOG3691|consen  110 ELLNTRRDELQKLWAENSQYKKVIEVLKEIEELRQVPQKIETLIAKEQYLQASDLLTRAWELLNGP-LDGVEGLSDLRSE  188 (982)
T ss_pred             HHHhcCHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-chhhhhhhHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999999997 9999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccCCc-chhhhcccccCCCCccccccccccCCCCCccccccccCCCCCCccCCCCCCCC
Q 001602          189 LTKLRGVLFYKVLEDLHAHLYNRGEY-SSAVLSMHEMDDEVPTTVAVAYTTNNSQPLSRRTRLKGDNQFGVHGLADGSHS  267 (1046)
Q Consensus       189 L~~q~~~L~d~lieEL~~hLYlKs~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  267 (1046)
                      |+.+++.|+++|+||||+|+|+|+.. -..+  ..+ .+.++..                  ++           ++   
T Consensus       189 le~~~~~L~~~L~eELv~ily~ks~~~~l~~--~~~-~~~~~s~------------------l~-----------~~---  233 (982)
T KOG3691|consen  189 LEGLLSHLEDILIEELVSILYLKSVAYPLVS--YCR-TNPLSSR------------------LN-----------DF---  233 (982)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhchhhhhHHh--hhc-CCchhhH------------------HH-----------HH---
Confidence            99999999999999999999999752 0000  000 1111000                  00           00   


Q ss_pred             CCCCCCCCCCCcccccccccccccccc-----ccCCC----ch--HHHHHhhcC-CCchhHHHHHHHHHHHHhcCChHHH
Q 001602          268 STFDGHDEDGSLEAHDETSLDGLSIGW-----LANST----PD--EFVEAIRKS-DAPLHVKYLQTMVECLCILGKVAAA  335 (1046)
Q Consensus       268 ~~~~~~~~~~~~~~~d~~~~~~~~~~f-----l~~~~----~~--~~~ed~~~n-~~~~sf~yi~~lvesL~~LgkL~~A  335 (1046)
                              .++.++.++...++.+.+.     ..+..    .+  ...+++.-. |++.+-.+..++++.++++.|+|.+
T Consensus       234 --------~~~~in~t~l~~sr~~~ea~~~k~~~g~~sv~~~~~~~~~~~l~~~~pe~~sslf~~il~k~~~~~~k~p~~  305 (982)
T KOG3691|consen  234 --------LYNNINTTTLGTSRQLLEALCHKSDAGSGSVRDIRIVLEKEDLLLSLPEANSSLFRRILEKFTTVDSKSPAI  305 (982)
T ss_pred             --------hhcccCccccCccHHHHHHHHHHhhcCCcchhhHHHHHhhccccccchhhHHHHHHHHHHHHhhhhhhhHHH
Confidence                    0011111111111100000     00000    00  001111111 4555666888999999999999999


Q ss_pred             HHHHHHhhhHHHHHHHHHHHHHHHhhhhccccccccccccCcccccccccccccccccccccccCccccccccccCcccc
Q 001602          336 GAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSA  415 (1046)
Q Consensus       336 l~~i~qRl~~EL~~iV~~ti~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~s~~~~~~~~~~~~~  415 (1046)
                      +.+|..|+.+|++.+|.++...+       +.++.      +.         ..++  +    +                
T Consensus       306 ~n~i~~~~~~el~niv~kSt~~i-------~~~g~------~~---------~e~a--t----~----------------  341 (982)
T KOG3691|consen  306 VNKISERINVELVNIVSKSTYDI-------SLSGE------TD---------REHA--T----F----------------  341 (982)
T ss_pred             HHHHHHHHHHHHHHhhhccchhh-------hcccc------ch---------hhhh--h----c----------------
Confidence            99999999999999998744433       11111      11         1110  0    0                


Q ss_pred             ccccCcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhcccCCCCCccccccCCCCCCCccccCCCCchhhhhHHHH
Q 001602          416 LMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEASVTGGYSIGFSMTVLQ  495 (1046)
Q Consensus       416 ~~~~~~~~~~~l~ell~~lf~kf~~v~q~Hrvv~e~~~~~~~r~~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~vW~~iQ  495 (1046)
                           +....+|.+|||.||.||.+++++|++++..-..    .+.-.|.             .+-...|++.++|.++|
T Consensus       342 -----~tn~f~L~ell~~if~kf~a~aq~Ha~~~~~s~~----~~vv~P~-------------~sq~d~f~~~~~W~k~q  399 (982)
T KOG3691|consen  342 -----DTNHFMLLELLEEIFTKFEAAAQKHASSLHKSLQ----NDVVSPK-------------VSQKDTFDFTDFWQKAQ  399 (982)
T ss_pred             -----cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc----ccccCCc-------------ccCCCcccHHHHHHHHH
Confidence                 0012379999999999999999999999773331    1110000             01122699999999999


Q ss_pred             HHHHHHHHHHhccCCccchh-hhHhhhhhhccCCCCccccccccC-C-CC-CccccccccCCcccccCCcchhhhhcccc
Q 001602          496 SECQQLICEILRATPEAASA-DAAVQTARLASKAPSKEKSYAYRD-G-SE-DGLTFAFRFTDATISIPNQGADLIRQGWS  571 (1046)
Q Consensus       496 ~Eir~LL~~YL~~~~~~~~~-~~~~~~~~~~s~~~~~~k~~~~~~-~-~~-~~~~~~F~~~d~~~s~~~~~~~~~~~~~~  571 (1046)
                      +||+.||.+|++..+..... ..+.+   .+...+.+++.+.+.. . .+ ..-.|.++|+..+....-   ++.-+.++
T Consensus       400 s~ielllsE~i~~nn~~~~~~e~s~~---~sp~s~~r~~~~~f~~e~~~~~~s~~f~~~~~~~a~~k~~---~l~~qrs~  473 (982)
T KOG3691|consen  400 SEIELLLSEYIDNNNNSVKGTEMSIN---NSPASNERKKLFDFTNEIAVEPNSNLFYHRINELANEKAP---ELILQRSN  473 (982)
T ss_pred             HHHHHHHHHHhccCCCcccccccccc---CCCCCcchhHHHHhhccccCCCCcccchhHHHHHhhhccc---hhhhhhhh
Confidence            99999999999875543221 11111   1111112222111110 0 00 111244444444332110   11111111


Q ss_pred             cC-CCccccCCCC--cccccCCCCcchhhhhhHhHHHHHHHHHhhCCCcccccCccchHHHHHHHHHhhhccchhHHHHH
Q 001602          572 RR-GTNVLQEGYG--TAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRK  648 (1046)
Q Consensus       572 ~~-~~~~~~~g~~--~~~~l~~~sifn~~~il~P~L~Fi~~~~~ilp~~~s~~~~~~l~~Fld~Fv~~vFLPql~~~~~~  648 (1046)
                      .. .....+.|..  ....+|+||+|||++||+|++.|++.++.++|.+  .+.+|.++.|+|+||+++||||+...+..
T Consensus       474 ~~~~~~el~~g~s~e~~e~ic~Psvfni~vI~~pll~fie~te~~l~~~--p~q~c~l~~Fm~~yi~~sFl~qv~~~m~~  551 (982)
T KOG3691|consen  474 ASVSTIELFSGSSKEIVELICKPSVFNIKVILPPLLRFIEETESILKNP--PIQPCSLRNFMDEYIKGSFLPQVYKEMSS  551 (982)
T ss_pred             hhhccchhccCcchhhhcccCCcccceeeehhhHHHHHHHHHHHHcCCC--CCCCchHHHHHHHHHHHHhHHHHHHHHHH
Confidence            11 1112233322  2346999999999999999999999999999976  45689999999999999999999999999


Q ss_pred             HHHHHhcCCCccccccccccccccccccCCcchhhHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001602          649 GVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYM  728 (1046)
Q Consensus       649 ~~~~~~~~~daf~~~~~~~~~~~~~~~~~rPI~k~t~~~~~~~~~l~~ml~t~p~y~~~~~~li~~~L~~yye~c~~~y~  728 (1046)
                      .|+.++++.|||+....|...  +..+-.+|++|.++.+..-+.++...+++.+.|.+-|+.++|..+..|++-|.+.|+
T Consensus       552 ~ie~~~k~~~a~~l~~s~~~i--~i~k~~~~l~q~~~~ve~~L~~v~n~~~~l~~~~~~~l~m~~~~~~~Y~~~c~~a~~  629 (982)
T KOG3691|consen  552 HIEGIMKDVDAFRLHRSWKII--PIFKCHLPLLQSFHIVEDYLPIVANLAVDLYELSDYLLNMVCNHLSDYLDICRAALR  629 (982)
T ss_pred             HhHhhcccCcceeeecCHhhh--hHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999998652  233455677777666655667788899999999999999999999999999999999


Q ss_pred             HHHh------hhhhhhhcccchhhHHhhcCcccccCCC-CCcCC--C--Cc---cCCCCchhhhhHHHHHhhc-cCCCCC
Q 001602          729 EAVL------EKQSYMLIGRHDIDKLLRLEPASASLPN-GQLDS--V--SS---VNDAETPGVESELRELFLS-LRPIRQ  793 (1046)
Q Consensus       729 ~lv~------~~~s~~~~~~~d~~~l~~~~~~~~~l~~-~~~~~--~--~~---~~~~~l~e~E~~l~~~~~~-~~~i~~  793 (1046)
                      +.+.      .+++++|+.++|++++++..|+|....- ++...  .  ..   +.++...|.|+.++++.+. +..++.
T Consensus       630 g~~~~~~~~~~~is~aWl~Dddisr~l~klpNw~~~s~~~~~~~~r~E~e~~lq~~~r~~kE~e~li~nLgt~~q~~~s~  709 (982)
T KOG3691|consen  630 GIVQHVSEVKRKISVAWLKDDDISRQLKKLPNWKNPSLEGQNELCREEEESFLQAGDRNIKESELLISNLGTDSQLSISV  709 (982)
T ss_pred             cccCCCcchhhhhhHHHhccchhHHHHHhccCCcccccccccchhhhhcchHhHhhhcccchHhhhhcccchhhhcccCH
Confidence            9997      3588999999999999999999965411 22111  0  00   1122233455544443322 557899


Q ss_pred             CcccCChHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCcccccCCC-CCCCCC------CCchhhhHHHHHHHHHHHHHH
Q 001602          794 ENLIHDENKLILLASLSDSLEYVADSIERLGRATLRESNLVEESRK-PHHNRS------SSAPSRDLASFADEYRKLAID  866 (1046)
Q Consensus       794 ~dlI~d~~~l~~La~L~~SL~Wl~~~i~~L~~~~~~~~~~~~~~~~-~~~~r~------~~~~~~~f~~l~~~f~~La~~  866 (1046)
                      ++|+.|...++.+|.+++||+||+.+++...+...... ...+.+. +++.-+      +.-....|+.++++|++||++
T Consensus       710 ~~il~~m~~lK~~a~m~ES~~w~a~r~rs~~~~l~~~~-ll~~n~~~~~~~~~dl~~l~dd~~~s~~ee~~~~fq~la~~  788 (982)
T KOG3691|consen  710 SDILNDMSDLKQLANMHESLEWFADRARSGFDFLPIDN-LLGNNPALMKGYLTDLIELYDDFYKSAYEELADSFQRLAFD  788 (982)
T ss_pred             HHHHHHHHHHHHHHhhhhhHHHHHHHHHhhccccchhh-hhcCCccccccccccchhhhcchHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999998766555432211 0000011 111111      112345789999999999999


Q ss_pred             HHHHHHHHHHHHHHhhcccccC-CCC--CCCCCCCCCChHHHHHHHHHHHHHHHhccCCchhhhhhhhccHHHHHHHHHH
Q 001602          867 CLKVLRVEMQLETIFHLQEMTS-RDY--LEDQDAEEPDDFIISLTSQITRRDEEMAPFIAEEKRNYIFGGICGIAANASI  943 (1046)
Q Consensus       867 ~Ll~LrlEvR~~~iy~L~~~~~-~~y--~~~~~~~epDp~I~~Ln~dL~~~de~ls~~L~~~k~~fIF~GL~~li~~~lI  943 (1046)
                      ||+.||+|||+||||||+++.. ++|  +-..+++||||.|+.||++|.++|++|+++|+|+|++|||+|||+|++++||
T Consensus       789 cLLlLhlEVRv~Cfh~l~~~s~~~n~~i~~~~~s~e~D~~V~aL~k~l~~~e~klk~~L~e~k~~yIFeGL~hL~s~~LI  868 (982)
T KOG3691|consen  789 CLLLLHLEVRVQCFHYLNPLSKLRNTSIVNRDVSGEPDPSVVALNKDLSTTEEKLKACLNEWKRRYIFEGLGHLVSSILI  868 (982)
T ss_pred             HHHHHHHHHHHHHHhhcchhhccCCceeecccccCCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHhhHHHHHHHHHH
Confidence            9999999999999999997553 443  2333499999999999999999999999999999999999999999999999


Q ss_pred             HhchhhhhhcHHhHHHHHHhHHHHHHHhhcCCCCChHHHHHhHHHHHHHHHhcCCCHHHHHHHHHhCCCCCCHHHHHHHh
Q 001602          944 KALADMKNINLFGVQQICRNSIALEQALAAIPSIDSEAVRRRLDRVRTYYELLNMPFEALLAFVTEHENLFTTTEYASLL 1023 (1046)
Q Consensus       944 ~~~~~i~~iN~~Gvkkm~rNI~~LQQ~L~nI~~~~~~~v~~~l~ra~~yyeL~~~~~~~ll~~i~e~~~~Fs~~Ey~~ll 1023 (1046)
                      +++++|++||++|||||||||+||||+|+||+++++    +||++||+||+||+++|++|++.+.+++.+||+.||++|+
T Consensus       869 ~~a~~i~~ln~~~ikkMcRNv~~lQQ~Lsnit~~re----vdld~ar~fy~ll~nt~deile~v~d~~~qfse~e~~qll  944 (982)
T KOG3691|consen  869 SGAQYIERLNEGGIKKMCRNVSALQQILSNITESRE----VDLDKARRFYELLQNTADEILEHVIDARKQFSEPELKQLL  944 (982)
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcccccc----cccHHHHHHHHHHhcCHHHHHHHHHhccccccHHHHHHHH
Confidence            999999999999999999999999999999998773    4999999999999999999999999999999999999999


Q ss_pred             hcccCC-CCC-----chhHHHhHHhhhc
Q 001602         1024 KVNVPG-REI-----PSDALDRVSEILS 1045 (1046)
Q Consensus      1024 ~L~~~~-~~~-----~~~~~~~~~~i~~ 1045 (1046)
                      +|.|++ .|+     ..++.||+++|+|
T Consensus       945 rls~rS~~g~~k~~~~~e~~qkl~n~i~  972 (982)
T KOG3691|consen  945 RLSYRSLKGDAKRNGRDELLQKLSNIIG  972 (982)
T ss_pred             HHHHHhhccccCCCchHHHHHHHHHHHh
Confidence            999985 444     4888999999984



>PF04048 Sec8_exocyst: Sec8 exocyst complex component specific domain; InterPro: IPR007191 Sec8 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane Back     alignment and domain information
>PF10475 DUF2450: Protein of unknown function N-terminal domain (DUF2450) ; InterPro: IPR019515 This entry represents Vacuolar protein sorting-associated protein 54, and is thought to be involved in retrograde transport from early and late endosomes to late Golgi found in eukaryotes, but its function is not known Back     alignment and domain information
>PF10474 DUF2451: Protein of unknown function C-terminus (DUF2451); InterPro: IPR019514 This protein is found in eukaryotes but its function is not known Back     alignment and domain information
>KOG2115 consensus Vacuolar sorting protein VPS45 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF15469 Sec5: Exocyst complex component Sec5 Back     alignment and domain information
>PF06248 Zw10: Centromere/kinetochore Zw10; InterPro: IPR009361 Zeste white 10 (ZW10) was initially identified as a mitotic checkpoint protein involved in chromosome segregation, and then implicated in targeting cytoplasmic dynein and dynactin to mitotic kinetochores, but it is also important in non-dividing cells Back     alignment and domain information
>PF04100 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007234 Vps53 complexes with Vps52 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events [] Back     alignment and domain information
>PF04124 Dor1: Dor1-like family ; InterPro: IPR007255 Dor1 is involved in vesicle targeting to the yeast Golgi apparatus and complexes with a number of other trafficking proteins, which include Sec34 and Sec35 [] Back     alignment and domain information
>PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases Back     alignment and domain information
>KOG2176 consensus Exocyst complex, subunit SEC15 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF10392 COG5: Golgi transport complex subunit 5; InterPro: IPR019465 The conserved oligomeric Golgi (COG) complex is a peripheral membrane complex involved in intra-Golgi protein trafficking Back     alignment and domain information
>KOG2180 consensus Late Golgi protein sorting complex, subunit Vps53 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2069 consensus Golgi transport complex subunit [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF06148 COG2: COG (conserved oligomeric Golgi) complex component, COG2; InterPro: IPR024602 This entry represents the uncharacterised N-terminal domain of subunit 2 of the COG complex Back     alignment and domain information
>PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane Back     alignment and domain information
>PF08700 Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT tethering complex (also known as GARP complex, Golgi associated retrograde protein complex, Vps53 tethering complex) is a conserved eukaryotic docking complex which is involved in recycling of proteins from endosomes to the late Golgi Back     alignment and domain information
>KOG2307 consensus Low density lipoprotein receptor [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2346 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF09763 Sec3_C: Exocyst complex component Sec3; InterPro: IPR019160 The exocyst complex is composed of 8 subunits: Exoc1, Exoc2, Exoc3, Exoc4, Exoc5, Exoc6, Exoc7 and Exoc8 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1046
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 75.3 bits (184), Expect = 8e-14
 Identities = 101/656 (15%), Positives = 196/656 (29%), Gaps = 198/656 (30%)

Query: 299 TPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAH 358
           + +E    I   DA      L      L    +       + + LR   ++ + S IK  
Sbjct: 47  SKEEIDHIIMSKDAVSGTLRL---FWTLLSKQEEMVQ-KFVEEVLRIN-YKFLMSPIKTE 101

Query: 359 A-QLINSSRSAIGQAAQTGTTGLHFMKG---------QLRSYQLPKQKRQNGISLSGTLL 408
             Q    +R  I Q  +       F K          +LR   L + +    + + G   
Sbjct: 102 QRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQ-ALLELRPAKNVLIDG--- 157

Query: 409 AVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVV---VGELLESRSSRHDINTPK 465
                   +   GK   A    L      V    +  +    +             N+P+
Sbjct: 158 --------VLGSGKTWVALDVCLS---YKVQCKMDFKIFWLNLKN----------CNSPE 196

Query: 466 SMIA---------DANWNPDSEASVTGGYSIGFSMTVLQSECQQLICE--------ILR- 507
           +++          D NW   S+ S     +I   +  +Q+E ++L+          +L  
Sbjct: 197 TVLEMLQKLLYQIDPNWTSRSDHS----SNIKLRIHSIQAELRRLLKSKPYENCLLVLLN 252

Query: 508 -ATPEAASA-DAAVQ---TAR---LASKAPSKEKSYAYRDGSEDGLTFAFRFTDATISIP 559
               +A +A + + +   T R   +     +   ++   D     LT            P
Sbjct: 253 VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLT------------P 300

Query: 560 NQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQ---GIYLAASIYRPVLQFTDKVASMLP- 615
           ++   L+           L         LP +         SI          +A  +  
Sbjct: 301 DEVKSLLL--------KYLDCRPQD---LPREVLTTNPRRLSI----------IAESIRD 339

Query: 616 -----QKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQ-AISSPAAFRPRAHTAAT 669
                  +  +  D L   +E+ + + L P    +YRK   + ++     F P AH    
Sbjct: 340 GLATWDNWKHVNCDKLTTIIESSL-NVLEPA---EYRKMFDRLSV-----FPPSAH---- 386

Query: 670 YVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMP----KFAADLVKYVQTFLERTYERCRT 725
            +P+      +L            ++ W   +          L KY  + +E+  +    
Sbjct: 387 -IPT-----ILL-----------SLI-WFDVIKSDVMVVVNKLHKY--SLVEKQPKESTI 426

Query: 726 SYM------------EAVLEKQSYMLIGRHDIDKLLRLEPASASLPNGQLDS-------- 765
           S              E  L +    ++  ++I K    +      P   LD         
Sbjct: 427 SIPSIYLELKVKLENEYALHRS---IVDHYNIPK--TFDSDDLIPP--YLDQYFYSHIGH 479

Query: 766 -VSSVNDAETPGVESELRELFLSLRPIRQENLIHDENKLILLASLSDSL-------EYVA 817
            + ++   E     +  R +FL  R + Q+ + HD        S+ ++L        Y+ 
Sbjct: 480 HLKNIEHPER---MTLFRMVFLDFRFLEQK-IRHDSTAWNASGSILNTLQQLKFYKPYIC 535

Query: 818 DSIERLGRATLRESNLVEESRKPHHNRSSSAPSRDLASFA--DEYRKLAIDCLKVL 871
           D+  +  R     + +++   K   N   S    DL   A   E   +  +  K +
Sbjct: 536 DNDPKYER---LVNAILDFLPKIEENLICS-KYTDLLRIALMAEDEAIFEEAHKQV 587


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1046
d2d2sa1229 Exocyst complex component EXO84 {Baker's yeast (Sa 93.42
>d2d2sa1 a.118.17.2 (A:525-753) Exocyst complex component EXO84 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Cullin repeat-like
family: Exocyst complex component
domain: Exocyst complex component EXO84
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.42  E-value=0.17  Score=24.42  Aligned_cols=69  Identities=13%  Similarity=0.111  Sum_probs=48.3

Q ss_pred             HHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC----CCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9899754028999999941679999999999999861339----88766608899999997979999999999
Q 001602          136 DQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREG----LQTVGALQDVRSELTKLRGVLFYKVLEDL  204 (1046)
Q Consensus       136 ~~Ie~l~~vP~~ie~~i~~k~y~~A~~lL~~~~~~l~~~~----L~~i~aL~~lr~~l~~q~~~L~d~lieEL  204 (1046)
                      ..|+.+...||.++..|++++|-+|++++..+-..+.+.+    ...+..+..++..+.+.+..|.+.|..+|
T Consensus         7 ~~~~wl~d~~d~LDv~Ia~~~feeAl~ll~~~e~~l~~~~~~~~~~~~~~~~~i~~kv~~r~~~L~~~L~~~l   79 (229)
T d2d2sa1           7 QRLKFLDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSI   79 (229)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             6441372661888999998609999999999999997363456753278999999999999999999999998