Citrus Sinensis ID: 001638
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1039 | 2.2.26 [Sep-21-2011] | |||||||
| Q9M2L4 | 1025 | Putative calcium-transpor | yes | no | 0.982 | 0.996 | 0.701 | 0.0 | |
| O22218 | 1030 | Calcium-transporting ATPa | no | no | 0.985 | 0.994 | 0.692 | 0.0 | |
| Q2QY12 | 1039 | Probable calcium-transpor | yes | no | 0.993 | 0.993 | 0.673 | 0.0 | |
| Q2RAS0 | 1017 | Probable calcium-transpor | yes | no | 0.972 | 0.993 | 0.662 | 0.0 | |
| Q8RUN1 | 1043 | Calcium-transporting ATPa | no | no | 0.986 | 0.982 | 0.652 | 0.0 | |
| Q37145 | 1020 | Calcium-transporting ATPa | no | no | 0.976 | 0.995 | 0.636 | 0.0 | |
| O81108 | 1014 | Calcium-transporting ATPa | no | no | 0.973 | 0.997 | 0.636 | 0.0 | |
| Q2QMX9 | 1020 | Calcium-transporting ATPa | no | no | 0.976 | 0.995 | 0.639 | 0.0 | |
| O64806 | 1015 | Putative calcium-transpor | no | no | 0.973 | 0.996 | 0.636 | 0.0 | |
| Q65X71 | 1021 | Probable calcium-transpor | no | no | 0.972 | 0.989 | 0.618 | 0.0 |
| >sp|Q9M2L4|ACA11_ARATH Putative calcium-transporting ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=ACA11 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 1503 bits (3891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 727/1036 (70%), Positives = 876/1036 (84%), Gaps = 15/1036 (1%)
Query: 1 MENYLKKNFDVDPKRPSEEALMRWRSAVRVVKNPRRRFRMVADLAKRAEAERKRKKLQEK 60
M N LK +F+V K PS EA RWRS+V +VKN RRFRM+++L K AE E+KR ++QEK
Sbjct: 1 MSNLLK-DFEVASKNPSLEARQRWRSSVGLVKNRARRFRMISNLDKLAENEKKRCQIQEK 59
Query: 61 LRVALYVQKAALHFIDAGSRPIEYKLSQETLLAGYGIEPDELESIVRSHNSKAVESRGGV 120
+RV YVQKAA FIDAG+RP EYKL+ E AG+ +E DEL S+VR+H++K++ GG
Sbjct: 60 IRVVFYVQKAAFQFIDAGARP-EYKLTDEVKKAGFYVEADELASMVRNHDTKSLTKIGGP 118
Query: 121 EGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICA 180
EG+A++VSVSL +GV S E+ R+ +YG NRY EKPARSF FVWEAL D+TLIILM+CA
Sbjct: 119 EGIAQKVSVSLAEGVRSSELHIREKIYGENRYTEKPARSFLTFVWEALQDITLIILMVCA 178
Query: 181 AVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVT 240
VSIGVG+ TEG+P G+YDG GI+LSI+LVV+VTA+SDYKQSLQF+ LD+EKK +I+QVT
Sbjct: 179 VVSIGVGVATEGFPKGMYDGTGILLSIILVVMVTAISDYKQSLQFRDLDREKKKIIIQVT 238
Query: 241 RDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDRP 300
RDG R+++SI+DLVVGD+VHLSIGDQVPADGI ISGY+L IDESSLSGE+EP H+N+++P
Sbjct: 239 RDGSRQEVSIHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGESEPSHVNKEKP 298
Query: 301 FLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLV 360
FLLSGTKVQ+GS KMLVT+VGMRTEWG+LM TLSEGGEDETPLQVKLNGVAT+IGKIGL
Sbjct: 299 FLLSGTKVQNGSAKMLVTTVGMRTEWGKLMDTLSEGGEDETPLQVKLNGVATIIGKIGLG 358
Query: 361 FAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLS 420
FAVLTF+VL +RF+VEKA I WSS DA+ LL+YFAIAVTI+VVAVPEGLPLAVTLS
Sbjct: 359 FAVLTFVVLCIRFVVEKATAGSITEWSSEDALTLLDYFAIAVTIIVVAVPEGLPLAVTLS 418
Query: 421 LAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSG 480
LAFAMK+LM+D+ALVRHL+ACETMGS++CICTDKTGTLTTNHMVV K+WIC K
Sbjct: 419 LAFAMKQLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWICENIKE---- 474
Query: 481 DNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDS 540
E+ + ++S+ V NI +Q+IFQNTGSEVVKDK+G+T ILG+PTERAILEFGL+LGGD
Sbjct: 475 RQEENFQLNLSEQVKNILIQAIFQNTGSEVVKDKEGKTQILGSPTERAILEFGLLLGGDV 534
Query: 541 TFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAV 600
R E I+K+EPFNS KK+MSVL S + G R FCKGASEI+L MC+K+++++G++V
Sbjct: 535 DTQRREHKILKIEPFNSDKKKMSVLTS-HSGGKVRAFCKGASEIVLKMCEKVVDSNGESV 593
Query: 601 PISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRP 660
P+SEE+ ++++VI GF+SEALRTLCL + D+ + + +P YTL+AVVGIKDPVRP
Sbjct: 594 PLSEEKIASISDVIEGFASEALRTLCLVYTDLDEAPRGD-LPNGGYTLVAVVGIKDPVRP 652
Query: 661 GVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQEL 720
GVREAV+TC AAGITVRMVTGDNI TAKAIAKECGILT GG+AIEG+DFR+ P EM+ +
Sbjct: 653 GVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGILTAGGVAIEGSDFRNLPPHEMRAI 712
Query: 721 IPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVA 780
+PK+QVMARS P DK+ LV LR + EVVAVTG+GTNDAPALHEADIGLAMGIAGTEVA
Sbjct: 713 LPKIQVMARSLPLDKHTLVNNLRKM-GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVA 771
Query: 781 KENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPL 840
KENADVIIMDDNF TIV VA+WGR+VYINIQKFVQFQLTVN+VAL+INFV+ACITGSAPL
Sbjct: 772 KENADVIIMDDNFATIVNVAKWGRAVYINIQKFVQFQLTVNVVALIINFVSACITGSAPL 831
Query: 841 TAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIV 900
TAVQLLWVNMIMDTLGALALATEPP+EGLM+R PIGR FIT MWRNIIGQSIYQ+IV
Sbjct: 832 TAVQLLWVNMIMDTLGALALATEPPNEGLMKRQPIGRTASFITRAMWRNIIGQSIYQLIV 891
Query: 901 LGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVF 960
LG+L F GK+IL L+GP++T++LNT IFNSFVFCQVFNE+NSR++EKINVF G+F SWVF
Sbjct: 892 LGILNFAGKQILNLNGPDSTIVLNTIIFNSFVFCQVFNEVNSREIEKINVFEGMFKSWVF 951
Query: 961 IAVLVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVGTCTSA 1020
+AV+ ATVGFQVIIVE LG FA+TVPL+W+ WL ++IG++SM V LKCIPV
Sbjct: 952 VAVMTATVGFQVIIVEFLGAFASTVPLSWQHWLLCILIGSVSMILAVGLKCIPV------ 1005
Query: 1021 ANSKHHDGYEPLPTGP 1036
+++HHDGYE LP+GP
Sbjct: 1006 ESNRHHDGYELLPSGP 1021
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8 |
| >sp|O22218|ACA4_ARATH Calcium-transporting ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=ACA4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1493 bits (3864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 717/1036 (69%), Positives = 878/1036 (84%), Gaps = 12/1036 (1%)
Query: 1 MENYLKKNFDVDPKRPSEEALMRWRSAVRVVKNPRRRFRMVADLAKRAEAERKRKKLQEK 60
M N L+ +F+V+ K PS EA RWRS+V +VKN RRFR + DL K A+ E K+ ++QEK
Sbjct: 1 MSNLLR-DFEVEAKNPSLEARQRWRSSVSIVKNRTRRFRNIRDLDKLADYENKKHQIQEK 59
Query: 61 LRVALYVQKAALHFIDAGSRPIEYKLSQETLLAGYGIEPDELESIVRSHNSKAVESRGGV 120
+RVA +VQKAALHFIDA +RP EYKL+ E AG+ IE DEL S+VR +++K++ +GGV
Sbjct: 60 IRVAFFVQKAALHFIDAAARP-EYKLTDEVKKAGFSIEADELASMVRKNDTKSLAQKGGV 118
Query: 121 EGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICA 180
E LA++VSVSL +G+ S EV R+ ++G NRY EKPARSF MFVWEALHD+TLIILM+CA
Sbjct: 119 EELAKKVSVSLSEGIRSSEVPIREKIFGENRYTEKPARSFLMFVWEALHDITLIILMVCA 178
Query: 181 AVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVT 240
VSIGVG+ TEG+P G+YDG GI+LSILLVV+VTA+SDYKQSLQF+ LD+EKK +IVQVT
Sbjct: 179 VVSIGVGVATEGFPRGMYDGTGILLSILLVVMVTAISDYKQSLQFRDLDREKKKIIVQVT 238
Query: 241 RDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDRP 300
RDG R+++SI+DLVVGD+VHLSIGDQVPADGI ISGY+L IDESSLSGE+EP H+N+++P
Sbjct: 239 RDGSRQEISIHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGESEPSHVNKEKP 298
Query: 301 FLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLV 360
FLLSGTKVQ+GS KMLVT+VGMRTEWG+LM TL +GGEDETPLQVKLNGVAT+IGKIGL
Sbjct: 299 FLLSGTKVQNGSAKMLVTTVGMRTEWGKLMETLVDGGEDETPLQVKLNGVATIIGKIGLS 358
Query: 361 FAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLS 420
FAVLTF+VL +RF+++KA +WSS DA+ LL+YFAI+VTI+VVAVPEGLPLAVTLS
Sbjct: 359 FAVLTFVVLCIRFVLDKATSGSFTNWSSEDALTLLDYFAISVTIIVVAVPEGLPLAVTLS 418
Query: 421 LAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSG 480
LAFAMKKLM+D+ALVRHL+ACETMGS++CICTDKTGTLTTNHMVV K+WIC++ + + G
Sbjct: 419 LAFAMKKLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWICDKVQERQEG 478
Query: 481 DNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDS 540
+++ + +S+ V + LQ IFQNTGSEVVKDKDG T ILG+PTERAILEFGL+LGGD
Sbjct: 479 -SKESFELELSEEVQSTLLQGIFQNTGSEVVKDKDGNTQILGSPTERAILEFGLLLGGDF 537
Query: 541 TFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAV 600
R+E I+K+EPFNS KK+MSVL++LP GG R FCKGASEI+L MC+ +++++G++V
Sbjct: 538 NTQRKEHKILKIEPFNSDKKKMSVLIALP-GGGARAFCKGASEIVLKMCENVVDSNGESV 596
Query: 601 PISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRP 660
P++EE+ +++++I GF+SEALRTLCL ++D+ E +P+ YT++AVVGIKDPVRP
Sbjct: 597 PLTEERITSISDIIEGFASEALRTLCLVYKDLDEAPSGE-LPDGGYTMVAVVGIKDPVRP 655
Query: 661 GVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQEL 720
GVREAV+TC AAGITVRMVTGDNI TAKAIAKECGI T+GGLAIEG++FR +P EM+ +
Sbjct: 656 GVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGIYTEGGLAIEGSEFRDLSPHEMRAI 715
Query: 721 IPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVA 780
IPK+QVMARS P DK+ LV+ LR + EVVAVTG+GTNDAPALHEADIGLAMGIAGTEVA
Sbjct: 716 IPKIQVMARSLPLDKHTLVSNLRKI-GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVA 774
Query: 781 KENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPL 840
KENADVIIMDDNF TIV VARWGR+VYINIQKFVQFQLTVN+VAL+INFV+ACITGSAPL
Sbjct: 775 KENADVIIMDDNFKTIVNVARWGRAVYINIQKFVQFQLTVNVVALIINFVSACITGSAPL 834
Query: 841 TAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIV 900
TAVQLLWVNMIMDTLGALALATEPP+EGLM+R PI R FIT TMWRNI GQS+YQ+IV
Sbjct: 835 TAVQLLWVNMIMDTLGALALATEPPNEGLMKRAPIARTASFITKTMWRNIAGQSVYQLIV 894
Query: 901 LGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVF 960
LG+L F GK +LKL GP++T +LNT IFNSFVFCQVFNEINSR++EKINVF+G+F+SWVF
Sbjct: 895 LGILNFAGKSLLKLDGPDSTAVLNTVIFNSFVFCQVFNEINSREIEKINVFKGMFNSWVF 954
Query: 961 IAVLVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVGTCTSA 1020
V+ TV FQVIIVE LG FA+TVPL+W+ WL S++IG+++M V+LKC+PV
Sbjct: 955 TWVMTVTVVFQVIIVEFLGAFASTVPLSWQHWLLSILIGSLNMIVAVILKCVPV------ 1008
Query: 1021 ANSKHHDGYEPLPTGP 1036
+ HHDGY+ LP+GP
Sbjct: 1009 ESRHHHDGYDLLPSGP 1024
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into small vacuoles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2QY12|ACA4_ORYSJ Probable calcium-transporting ATPase 4, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0136900 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1442 bits (3732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 700/1039 (67%), Positives = 854/1039 (82%), Gaps = 7/1039 (0%)
Query: 1 MENYLKKNFDVDPKRPSEEALMRWRSAV-RVVKNPRRRFRMVADLAKRAEAERKRKKLQE 59
++ YL++NFDV K PSEEA RWR AV +VKN RRRFR V DL +R+ + K + QE
Sbjct: 4 LDRYLQENFDVPAKNPSEEAQRRWRQAVGTIVKNRRRRFRWVPDLERRSLDKAKVRSTQE 63
Query: 60 KLRVALYVQKAALHFIDAGSRPIEYKLSQETLLAGYGIEPDELESIVRSHNSKAVESRGG 119
K+RVALYVQ+AAL F D G++ EYKL+ + + AGY I PDEL I H+SKA++ GG
Sbjct: 64 KIRVALYVQQAALIFSD-GAKKKEYKLTGDIIKAGYAINPDELALITSKHDSKALKMHGG 122
Query: 120 VEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMIC 179
V+G++ +V S G+ + E+ RQN+YG NRYAEKP+RSFWMFVW+AL D+TLIILM+C
Sbjct: 123 VDGISIKVRSSFDHGIYASELDTRQNIYGVNRYAEKPSRSFWMFVWDALQDMTLIILMVC 182
Query: 180 AAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQV 239
A +S+ VG+ TEGWP G+YDGLGI+LSI LVV+VTAVSDYKQSLQFK LD EKK + + V
Sbjct: 183 ALLSVAVGLATEGWPKGMYDGLGIILSIFLVVMVTAVSDYKQSLQFKELDNEKKKIFIHV 242
Query: 240 TRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDR 299
TRDG R+K+SIYDLVVGDIVHLSIGDQVPADG+ I GYSL IDESSLSGE++PV++++D+
Sbjct: 243 TRDGRRQKISIYDLVVGDIVHLSIGDQVPADGLYIHGYSLLIDESSLSGESDPVYVSQDK 302
Query: 300 PFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGL 359
PF+L+GTKVQDGS KM+VT+VGMRTEWG+LM TLSEGGEDETPLQVKLNGVAT+IGKIGL
Sbjct: 303 PFILAGTKVQDGSAKMIVTAVGMRTEWGKLMSTLSEGGEDETPLQVKLNGVATIIGKIGL 362
Query: 360 VFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTL 419
VFA+LTFLVL +RFL++K + W S DA+ ++NYFA AVTI+VVAVPEGLPLAVTL
Sbjct: 363 VFAILTFLVLLVRFLIDKGMTVGLLKWYSTDALTIVNYFATAVTIIVVAVPEGLPLAVTL 422
Query: 420 SLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKS 479
SLAFAMKKLMNDKALVRHLSACETMGSA ICTDKTGTLTTNHMVV K+WI +K++ S
Sbjct: 423 SLAFAMKKLMNDKALVRHLSACETMGSAGTICTDKTGTLTTNHMVVDKIWISEVSKSVTS 482
Query: 480 GDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGD 539
L VS + ++ LQ IF+NT +EVVK+KDG+ +LGTPTERAILEFGL L GD
Sbjct: 483 NTISGELNSVVSSSTLSLLLQGIFENTSAEVVKEKDGKQTVLGTPTERAILEFGLGLKGD 542
Query: 540 STFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKA 599
VKVEPFNSVKK+M+VL+SLP NG R FCKGASEIIL MCD +++ DG A
Sbjct: 543 HDAEYRACTKVKVEPFNSVKKKMAVLISLP-NGTSRWFCKGASEIILQMCDMMVDGDGNA 601
Query: 600 VPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESI-PENNYTLIAVVGIKDPV 658
+P+SE QRKN+ + IN F+S+ALRTLCLA++++ + + P + +TLIA+ GIKDPV
Sbjct: 602 IPLSEAQRKNILDTINSFASDALRTLCLAYKEVDDDIDDNADSPTSGFTLIAIFGIKDPV 661
Query: 659 RPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQ 718
RPGV++AV+TC++AGITVRMVTGDNI+TAKAIAKECGILT+ G+AIEG +F SK+ +EM+
Sbjct: 662 RPGVKDAVKTCMSAGITVRMVTGDNINTAKAIAKECGILTEDGVAIEGPEFHSKSTEEMR 721
Query: 719 ELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTE 778
+LI +QVMARS P DK+ LVT LR +F EVV+VTG+GTNDAPALHEADIGLAMGIAGTE
Sbjct: 722 DLILNIQVMARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTE 781
Query: 779 VAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSA 838
VAKE+ADVI++DDNFTTI+ VARWGR+VYINIQKFVQFQLTVNIVALVINFV+ACI GSA
Sbjct: 782 VAKESADVIVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACIIGSA 841
Query: 839 PLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQI 898
PLTAVQLLWVNMIMDTLGALALATEPP++ +M+RPP+ + FIT MWRNI+GQS+YQ+
Sbjct: 842 PLTAVQLLWVNMIMDTLGALALATEPPNDEMMKRPPVRKGESFITKFMWRNIMGQSLYQL 901
Query: 899 IVLGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSW 958
VLG L F G+++L + G ++ I+NT IFNSFVFCQVFNEINSR+M+KINVFRGI S+W
Sbjct: 902 FVLGALMFGGERLLNIKGADSKSIINTLIFNSFVFCQVFNEINSREMQKINVFRGIISNW 961
Query: 959 VFIAVLVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVGTCT 1018
+FIAV+ ATV FQV+I+E LGTFA+TVPLNW+ WL SV +G+IS+ GV+LKCIPVG+
Sbjct: 962 IFIAVIAATVAFQVVIIEFLGTFASTVPLNWQHWLLSVGLGSISLIVGVILKCIPVGSGE 1021
Query: 1019 SAANSKHHDGYEPLPTGPD 1037
++A +GY PL GPD
Sbjct: 1022 TSATP---NGYRPLANGPD 1037
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2RAS0|ACA5_ORYSJ Probable calcium-transporting ATPase 5, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os11g0140400 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1420 bits (3676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 688/1039 (66%), Positives = 839/1039 (80%), Gaps = 29/1039 (2%)
Query: 1 MENYLKKNFDVDPKRPSEEALMRWRSAV-RVVKNPRRRFRMVADLAKRAEAERKRKKLQE 59
++ YL+++FDV K PSEEA RWR AV +VKN RRRFR V DL +R+ + K + QE
Sbjct: 4 LDRYLQEHFDVPAKNPSEEAQRRWRQAVGTIVKNRRRRFRWVPDLDRRSLDKAKVRSTQE 63
Query: 60 KLRVALYVQKAALHFIDAGSRPIEYKLSQETLLAGYGIEPDELESIVRSHNSKAVESRGG 119
K+RVALYVQ+AAL F D DEL I H+SKA++ GG
Sbjct: 64 KIRVALYVQQAALIFSD-----------------------DELALITSKHDSKALKMHGG 100
Query: 120 VEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMIC 179
V+G++++V S G+ + ++ RQN+YG NRYAEKP+RSFWMFVW+A D+TLIILM+C
Sbjct: 101 VDGISKKVRSSFDHGICASDLDTRQNIYGVNRYAEKPSRSFWMFVWDAFQDMTLIILMVC 160
Query: 180 AAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQV 239
A +S+ VG+ TEGWP G+YDGLGI+LSI LVV+VTAVSDYKQSLQFK LD EKK + + V
Sbjct: 161 ALLSVAVGLATEGWPKGMYDGLGIILSIFLVVMVTAVSDYKQSLQFKELDNEKKKIFIHV 220
Query: 240 TRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDR 299
TRDG R+K+SIYDLVVGDIVHLSIGDQVPADG+ I GYSL IDESSLSGE++PV++++D+
Sbjct: 221 TRDGRRQKISIYDLVVGDIVHLSIGDQVPADGLYIHGYSLLIDESSLSGESDPVYVSQDK 280
Query: 300 PFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGL 359
PF+L+GTKVQDGS KM+VT+VGMRTEWG+LM TLSEGGEDETPLQVKLNGVATVIGKIGL
Sbjct: 281 PFILAGTKVQDGSAKMIVTAVGMRTEWGKLMSTLSEGGEDETPLQVKLNGVATVIGKIGL 340
Query: 360 VFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTL 419
VFA+LTFLVL +RFL++K + W S DA+ ++NYFA AVTI+VVAVPEGLPLAVTL
Sbjct: 341 VFAILTFLVLLVRFLIDKGMTVGLLKWYSTDALTIVNYFATAVTIIVVAVPEGLPLAVTL 400
Query: 420 SLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKS 479
SLAFAMKKLMNDKALVRHLSACETMGSA ICTDKTGTLTTN+MVV K+WI +K++ S
Sbjct: 401 SLAFAMKKLMNDKALVRHLSACETMGSAGTICTDKTGTLTTNYMVVDKIWISEVSKSVTS 460
Query: 480 GDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGD 539
L VS ++ LQ IF+NT +EVVK+KDG+ +LGTPTERAILEFGL L G
Sbjct: 461 NTISGELNSVVSSRTLSLLLQGIFENTSAEVVKEKDGKQTVLGTPTERAILEFGLGLEGV 520
Query: 540 STFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKA 599
VKVEPFNSVKK+M+VL+SLP +G R FCKGASEIIL MCD +++ DG A
Sbjct: 521 HDAEYSACTKVKVEPFNSVKKKMAVLISLP-SGTSRWFCKGASEIILQMCDMMVDGDGNA 579
Query: 600 VPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESI-PENNYTLIAVVGIKDPV 658
+P+SE QRKN+ + IN F+S+ALRTLCLA++++ + + P + +TLIA+ GIKDPV
Sbjct: 580 IPLSEAQRKNILDTINSFASDALRTLCLAYKEVDDDIDDNADSPTSGFTLIAIFGIKDPV 639
Query: 659 RPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQ 718
RPGV++AV+TC++AGITVRMVTGDNI+TAKAIAKECGILT+ G+AIEG +F SK+P+EM+
Sbjct: 640 RPGVKDAVKTCMSAGITVRMVTGDNINTAKAIAKECGILTEDGVAIEGPEFHSKSPEEMR 699
Query: 719 ELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTE 778
+LIP +QVMARS P DK+ LVT LR +F EVV+VTG+GTNDAPALHEADIGLAMGIAGTE
Sbjct: 700 DLIPNIQVMARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTE 759
Query: 779 VAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSA 838
VAKE+ADVI++DDNFTTI+ VARWGR+VYINIQKFVQFQLTVNIVALVINFV+ACITGSA
Sbjct: 760 VAKESADVIVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACITGSA 819
Query: 839 PLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQI 898
PLTAVQLLWVNMIMDTLGALALATEPP++ +M+RPP+ + FIT MWRNI+GQS+YQ+
Sbjct: 820 PLTAVQLLWVNMIMDTLGALALATEPPNDEMMKRPPVRKGESFITKVMWRNIMGQSLYQL 879
Query: 899 IVLGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSW 958
VLG L F G+ +L + G ++ I+NT IFNSFVFCQVFNEINSR+M+KINVFRGI S+W
Sbjct: 880 FVLGALMFGGESLLNIKGADSKSIINTLIFNSFVFCQVFNEINSREMQKINVFRGIISNW 939
Query: 959 VFIAVLVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVGTCT 1018
+FIAV+ ATV FQV+I+E LGTFA+TVPLNW+ WL SV +G+IS+ GV+LKCIPVG+
Sbjct: 940 IFIAVIAATVAFQVVIIEFLGTFASTVPLNWQHWLLSVGLGSISLIVGVILKCIPVGSGE 999
Query: 1019 SAANSKHHDGYEPLPTGPD 1037
++A +GY PL GPD
Sbjct: 1000 TSATP---NGYRPLANGPD 1015
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q8RUN1|ACA3_ORYSJ Calcium-transporting ATPase 3, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os01g0939100 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1351 bits (3497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 674/1033 (65%), Positives = 829/1033 (80%), Gaps = 8/1033 (0%)
Query: 7 KNFDVDPKRPSEEALMRWRSAV-RVVKNPRRRFRMVADLAKRAEAERKRKKLQEKLRVAL 65
K+F+V K PSEEA RWR AV +VKN RRRFRMV DL KR++AE +R+K+QEKLRVAL
Sbjct: 13 KSFEVPAKNPSEEAQRRWRDAVGTLVKNRRRRFRMVPDLDKRSQAETQRRKIQEKLRVAL 72
Query: 66 YVQKAALHFIDAGSRPIEYKLSQETLLAGYGIEPDELESIVRSHNSKAVESRGGVEGLAR 125
+VQKAAL FIDA R E+ L + G+ + +EL SIVR H++K++ GV+G+AR
Sbjct: 73 FVQKAALQFIDA-VRKTEHPLPELARQCGFSVSAEELASIVRGHDTKSLRFHNGVDGIAR 131
Query: 126 EVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIG 185
+V+VSL DGV S++ R VYG N+Y EKP R+FWMF+W+A D+TL++L CAAVS+
Sbjct: 132 KVAVSLADGVKSDDAGLRAEVYGANQYTEKPPRTFWMFLWDASQDMTLLLLAFCAAVSVA 191
Query: 186 VGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYR 245
+G+ TEGWP G+YDG+GI+L+ILLVV++TA SDYKQSLQF+ LDKEKK + VQVTRDGYR
Sbjct: 192 IGLATEGWPSGMYDGVGIMLTILLVVMITAASDYKQSLQFRDLDKEKKKIDVQVTRDGYR 251
Query: 246 KKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDRPFLLSG 305
+K+SIYD+VVGDIVHLSIGDQVPADG+ I GYS +DES+LSGE+EPVH++ FLL G
Sbjct: 252 QKVSIYDIVVGDIVHLSIGDQVPADGLFIDGYSFVVDESNLSGESEPVHVSTANRFLLGG 311
Query: 306 TKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLT 365
TKVQDGS +MLVT+VGMRTEWG LM TLS+GGEDETPLQVKLNGVAT+IGKIGL FAVLT
Sbjct: 312 TKVQDGSARMLVTAVGMRTEWGNLMETLSQGGEDETPLQVKLNGVATIIGKIGLAFAVLT 371
Query: 366 FLVLALRFLVEKA-QHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFA 424
F VL RFL+ KA + W +DA+ +LN+FA+AVTI+VVAVPEGLPLAVTLSLAFA
Sbjct: 372 FTVLMARFLLGKAGAPGGLLRWRMVDALAVLNFFAVAVTIIVVAVPEGLPLAVTLSLAFA 431
Query: 425 MKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEK 484
MKKLM ++ALVRHLSACETMGSASCICTDKTGTLTTNHMVV K+W A+T+ +
Sbjct: 432 MKKLMQERALVRHLSACETMGSASCICTDKTGTLTTNHMVVEKIWASGAAQTMSNAKGFD 491
Query: 485 LLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHR 544
L S+S+ + L+ +F +GSEVV+ KDGR I+GTPTE AILEFGL + +
Sbjct: 492 QLTSSMSETFAKVLLEGVFHCSGSEVVRGKDGRHTIMGTPTETAILEFGLAVEKRARIEH 551
Query: 545 EESAIVKVEPFNSVKKRMSVLVSLPNNGGF-RVFCKGASEIILNMCDKIINADGKAVPIS 603
+ +KVEPFNSVKK M+V+++ P+ GG R F KGASE++L+ C +++ G ++
Sbjct: 552 TGAGKLKVEPFNSVKKTMAVVIASPSAGGRPRAFLKGASEVVLSRCSLVLDGTGNVEKLT 611
Query: 604 EEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVR 663
+ + K + + I+ F+ EALRTLCLA+QD+ IP YTLIAV GIKDP+RPGVR
Sbjct: 612 DAKAKRVASAIDAFACEALRTLCLAYQDVD--GGGGDIPGEGYTLIAVFGIKDPLRPGVR 669
Query: 664 EAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPK 723
EAV TC AAGI VRMVTGDNI+TAKAIA+ECGILTD G+AIEG +FR+K+P +M+E+IPK
Sbjct: 670 EAVATCHAAGINVRMVTGDNINTAKAIARECGILTDDGIAIEGPEFRNKDPDQMREIIPK 729
Query: 724 LQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKEN 783
+QVMARS P DK+ LVT LR +F EVVAVTG+GTNDAPALHEADIGLAMGIAGTEVAKEN
Sbjct: 730 IQVMARSLPLDKHTLVTNLRGMFNEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKEN 789
Query: 784 ADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAV 843
ADVIIMDDNF+TI+ VA+WGRSVYINIQKFVQFQLTVN+VAL++NF++A TGSAPLT V
Sbjct: 790 ADVIIMDDNFSTIINVAKWGRSVYINIQKFVQFQLTVNVVALMVNFISASFTGSAPLTIV 849
Query: 844 QLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIVLGV 903
QLLWVN+IMDTLGALALATEPP++ +M+RPP+GR +FIT MWRNI+GQSIYQ++VLGV
Sbjct: 850 QLLWVNLIMDTLGALALATEPPNDAMMKRPPVGRGDNFITKVMWRNIVGQSIYQLVVLGV 909
Query: 904 LTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVFIAV 963
L GK +L+++GP A +LNTF+FN+FVFCQVFNE+NSR+MEKINVF GIFSSW+F AV
Sbjct: 910 LLLRGKSLLQINGPQADSLLNTFVFNTFVFCQVFNEVNSREMEKINVFSGIFSSWIFSAV 969
Query: 964 LVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVGTCTSAANS 1023
+ T GFQVI+VELLGTFA TV L+ KLWL SV+IG++ + G +LKCIPV + + A S
Sbjct: 970 VGVTAGFQVIMVELLGTFANTVHLSGKLWLTSVLIGSVGLVIGAILKCIPVESGSDA--S 1027
Query: 1024 KHHDGYEPLPTGP 1036
HDGY P+PTGP
Sbjct: 1028 DRHDGYRPIPTGP 1040
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q37145|ACA1_ARATH Calcium-transporting ATPase 1, chloroplastic OS=Arabidopsis thaliana GN=ACA1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 1303 bits (3371), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 649/1020 (63%), Positives = 797/1020 (78%), Gaps = 5/1020 (0%)
Query: 1 MENYLKKNF-DVDPKRPSEEALMRWRSAVRVVKNPRRRFRMVADLAKRAEAERKRKKLQE 59
ME+YL +NF DV PK S+EAL RWR +VKNP+RRFR A+L+KR+EAE R+ QE
Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60
Query: 60 KLRVALYVQKAALHFIDAGSRPIEYKLSQETLLAGYGIEPDELESIVRSHNSKAVESRGG 119
K RVA+ V +AAL FI++ EY L +E AG+ I PDEL SIV H+ K ++ GG
Sbjct: 61 KFRVAVLVSQAALQFINSLKLSSEYTLPEEVRKAGFEICPDELGSIVEGHDLKKLKIHGG 120
Query: 120 VEGLAREVSVSLPDGVASEE--VSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILM 177
EGL ++S S+ G+++ E +S R+ +YG N++ E P+R FW+FVWEAL D TL+IL
Sbjct: 121 TEGLTEKLSTSIASGISTSEDLLSVRKEIYGINQFTESPSRGFWLFVWEALQDTTLMILA 180
Query: 178 ICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIV 237
CA VS+ VGI EGWP G +DGLGIV SILLVV VTA SDY+QSLQFK LD EKK ++V
Sbjct: 181 ACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDAEKKKIVV 240
Query: 238 QVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINR 297
QVTRD R+K+SIYDL+ GD+VHL IGDQ+PADG+ ISG+S+ I+ESSL+GE+EPV ++
Sbjct: 241 QVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESEPVSVSV 300
Query: 298 DRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKI 357
+ PFLLSGTKVQDGS KMLVT+VGMRT+WG+LM TLSEGG+DETPLQVKLNGVAT+IGKI
Sbjct: 301 EHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 358 GLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAV 417
GL FAV+TF VL +K + W++ + M +L YFA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVITFAVLVQGLANQKRLDNSHWIWTADELMAMLEYFAVAVTIVVVAVPEGLPLAV 420
Query: 418 TLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTI 477
TLSLAFAMKK+MNDKALVR+L+ACETMGSA+ IC+DKTGTLTTNHM V K IC +AK +
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICEQAKEV 480
Query: 478 KSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILG 537
D + ++ + LQSIF NTG E+V K +T ILGTPTE A+LEFGL LG
Sbjct: 481 NGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLEFGLSLG 540
Query: 538 GDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADG 597
GD R+ S +VKVEPFNS KKRM V++ LP FR CKGASEI+L+ CDK IN DG
Sbjct: 541 GDFQEVRQASNVVKVEPFNSTKKRMGVVIELPER-HFRAHCKGASEIVLDSCDKYINKDG 599
Query: 598 KAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAES-IPENNYTLIAVVGIKD 656
+ VP+ E+ +L N+I F+SEALRTLCLA+ +I E+ IP YT I +VGIKD
Sbjct: 600 EVVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGIVGIKD 659
Query: 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQE 716
PVRPGV+E+V C +AGITVRMVTGDN+ TAKAIA+ECGILTD G+AIEG +FR K+ +E
Sbjct: 660 PVRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEE 719
Query: 717 MQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAG 776
+ +LIPKLQVMARSSP DK+ LV LR +F+EVVAVTG+GTNDAPALHEADIGLAMGI+G
Sbjct: 720 LLKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISG 779
Query: 777 TEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITG 836
TEVAKE+ADVII+DDNF+TIVTVA+WGRSVYINIQKFVQFQLTVN+VAL++NF++AC+TG
Sbjct: 780 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTG 839
Query: 837 SAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIY 896
+APLTAVQLLWVNMIMDTLGALALATEPP + LM+R P+GR +FI+ MWRNI+GQS+Y
Sbjct: 840 NAPLTAVQLLWVNMIMDTLGALALATEPPQDDLMKRSPVGRKGNFISNVMWRNILGQSLY 899
Query: 897 QIIVLGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFS 956
Q++++ L GK + L GP++ L LNT IFN FVFCQVFNEI+SR+MEKI+VF+GI
Sbjct: 900 QLVIIWCLQTKGKTMFGLDGPDSDLTLNTLIFNIFVFCQVFNEISSREMEKIDVFKGILK 959
Query: 957 SWVFIAVLVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVGT 1016
++VF+AVL TV FQVII+ELLGTFA T PLN WL S+++G + MP LK IPVG+
Sbjct: 960 NYVFVAVLTCTVVFQVIIIELLGTFADTTPLNLGQWLVSIILGFLGMPVAAALKMIPVGS 1019
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O81108|ACA2_ARATH Calcium-transporting ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=ACA2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1301 bits (3367), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 647/1017 (63%), Positives = 798/1017 (78%), Gaps = 6/1017 (0%)
Query: 1 MENYLKKNFDVDPKRPSEEALMRWRSAVRVVKNPRRRFRMVADLAKRAEAERKRKKLQEK 60
ME+YL +NFDV K SEE L +WR+ VVKNP+RRFR A+L+KR EA R+ QEK
Sbjct: 1 MESYLNENFDVKAKHSSEEVLEKWRNLCGVVKNPKRRFRFTANLSKRYEAAAMRRTNQEK 60
Query: 61 LRVALYVQKAALHFIDAGSRPIEYKLSQETLLAGYGIEPDELESIVRSHNSKAVESRGGV 120
LR+A+ V KAA FI +G P +Y + ++ AG+ I DEL SIV SH+ K ++ GGV
Sbjct: 61 LRIAVLVSKAAFQFI-SGVSPSDYTVPEDVKAAGFEICADELGSIVESHDVKKLKFHGGV 119
Query: 121 EGLAREVSVSLPDGVASE--EVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMI 178
+GLA ++ S DG+++E ++S RQ ++G N++AE R FW+FVWEAL D+TL+IL +
Sbjct: 120 DGLAGKLKASPTDGLSTEAAQLSQRQELFGINKFAESEMRGFWVFVWEALQDMTLMILGV 179
Query: 179 CAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQ 238
CA VS+ VGI TEGWP G +DGLGI SILLVV VTA SDY+QSLQF+ LDKEKK + VQ
Sbjct: 180 CAFVSLIVGIATEGWPKGSHDGLGIAASILLVVFVTATSDYRQSLQFRDLDKEKKKITVQ 239
Query: 239 VTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRD 298
VTR+G+R+KLSIYDL+ GDIVHL+IGDQVPADG+ +SG+S+ IDESSL+GE+EPV +N
Sbjct: 240 VTRNGFRQKLSIYDLLPGDIVHLAIGDQVPADGLFLSGFSVVIDESSLTGESEPVMVNAQ 299
Query: 299 RPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIG 358
PFL+SGTKVQDGS KM++T+VGMRT+WG+LM TL+EGG+DETPLQVKLNGVAT+IGKIG
Sbjct: 300 NPFLMSGTKVQDGSCKMMITTVGMRTQWGKLMATLTEGGDDETPLQVKLNGVATIIGKIG 359
Query: 359 LVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVT 418
L FAV+TF VL + K WS +A++LL YFAIAVTIVVVAVPEGLPLAVT
Sbjct: 360 LFFAVVTFAVLVQGMFMRKLSTGTHWVWSGDEALELLEYFAIAVTIVVVAVPEGLPLAVT 419
Query: 419 LSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIK 478
LSLAFAMKK+MNDKALVRHL+ACETMGSA+ IC+DKTGTLTTNHM V K IC + +
Sbjct: 420 LSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSCICMNVQDVA 479
Query: 479 SGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGG 538
+ + L+ + ++ + +QSIF NTG EVV +K G+T +LGTPTE AILE GL LGG
Sbjct: 480 NKGSS--LQSEIPESAVKLLIQSIFNNTGGEVVVNKHGKTELLGTPTETAILELGLSLGG 537
Query: 539 DSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGK 598
R+ ++KVEPFNS KKRM V++ LP G R KGASEI+L CDK++N+ G+
Sbjct: 538 KFQEERKSYKVIKVEPFNSTKKRMGVVIELPEGGRMRAHTKGASEIVLAACDKVVNSSGE 597
Query: 599 AVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAE-SIPENNYTLIAVVGIKDP 657
VP+ EE K L IN F++EALRTLCLA+ DI+G + +IP + +T + +VGIKDP
Sbjct: 598 VVPLDEESIKYLNVTINEFANEALRTLCLAYMDIEGGFSPDDAIPASGFTCVGIVGIKDP 657
Query: 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEM 717
VRPGV+E+VE C AGITVRMVTGDNI+TAKAIA+ECGILTD G+AIEG FR KN +E+
Sbjct: 658 VRPGVKESVELCRRAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPVFREKNQEEL 717
Query: 718 QELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGT 777
ELIPK+QVMARSSP DK+ LV QLR F EVVAVTG+GTNDAPALHEADIGLAMGIAGT
Sbjct: 718 LELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAGT 777
Query: 778 EVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGS 837
EVAKE+ADVII+DDNF+TIVTVA+WGRSVYINIQKFVQFQLTVN+VALV+NF +AC+TGS
Sbjct: 778 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALVVNFSSACLTGS 837
Query: 838 APLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQ 897
APLTAVQLLWVNMIMDTLGALALATEPP++ LM+R P+GR +FIT MWRNI+GQ++YQ
Sbjct: 838 APLTAVQLLWVNMIMDTLGALALATEPPNDELMKRLPVGRRGNFITNAMWRNILGQAVYQ 897
Query: 898 IIVLGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSS 957
IV+ +L GK + L GP++TL+LNT IFN FVFCQVFNEI+SR+ME+I+VF+GI +
Sbjct: 898 FIVIWILQAKGKAMFGLDGPDSTLMLNTLIFNCFVFCQVFNEISSREMEEIDVFKGILDN 957
Query: 958 WVFIAVLVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPV 1014
+VF+ V+ ATV FQ+II+E LGTFA+T PL W+ S+ IG + MP LK IPV
Sbjct: 958 YVFVVVIGATVFFQIIIIEFLGTFASTTPLTITQWIFSIFIGFLGMPIAAGLKTIPV 1014
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into the endoplasmic reticulum. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2QMX9|ACA1_ORYSJ Calcium-transporting ATPase 1, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0586600 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1296 bits (3355), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 652/1020 (63%), Positives = 790/1020 (77%), Gaps = 5/1020 (0%)
Query: 1 MENYLKKNFD-VDPKRPSEEALMRWRSAVRVVKNPRRRFRMVADLAKRAEAERKRKKLQE 59
ME+YL++NF V K SEEAL RWR VVKNP+RRFR A+L KR EA+ + E
Sbjct: 1 MESYLEENFGGVKAKNSSEEALRRWRKLCGVVKNPKRRFRFTANLDKRGEAQAIKHANHE 60
Query: 60 KLRVALYVQKAALHFIDAGSRPIEYKLSQETLLAGYGIEPDELESIVRSHNSKAVESRGG 119
KLRVA+ V KAAL FI S EY + +E AG+ I DEL SIV H+SK + + GG
Sbjct: 61 KLRVAVLVSKAALQFIQGLSLRSEYVVPEEVKAAGFQICADELGSIVEGHDSKKLITHGG 120
Query: 120 VEGLAREVSVSLPDGV--ASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILM 177
V G+A +++ S DG+ A E + RQ+VYG N++ E RSFW+FVWEAL D TLIIL
Sbjct: 121 VTGIADKLATSPADGLSTAEESIKRRQDVYGLNKFTESEVRSFWVFVWEALQDTTLIILA 180
Query: 178 ICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIV 237
+CA VS+ VGI EGWP G +DGLGIV SILLVV VTA SDY+QSLQFK LDKEKK + V
Sbjct: 181 VCAFVSLVVGIAMEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKIQV 240
Query: 238 QVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINR 297
QVTR+G+R++LSIYDL+ GD+VHL+IGDQVPADG+ ISG+SL I+ESSL+GE+EPV +N
Sbjct: 241 QVTRNGFRQRLSIYDLLPGDVVHLAIGDQVPADGLFISGFSLLINESSLTGESEPVVVNE 300
Query: 298 DRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKI 357
D PFLLSGTKVQDGS KML+T+VGMRT+WG+LM TLSEGG+DETPLQVKLNGVAT+IGKI
Sbjct: 301 DNPFLLSGTKVQDGSCKMLITTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 358 GLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAV 417
GL FAV+TF+VL+ + +K + WS DA+++L +FAIAVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVITFIVLSQGLISKKYHEGLLLSWSGDDALEMLEHFAIAVTIVVVAVPEGLPLAV 420
Query: 418 TLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTI 477
TLSLAFAMKK+MNDKALVRHL+ACETMGSA+ IC+DKTGTLTTNHM V K IC K +
Sbjct: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKACICGNIKEV 480
Query: 478 KSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILG 537
+ N L + + V L+SIF NTG EVV D+DG+ ILGTPTE A+LEF L LG
Sbjct: 481 NNPKNASDLCSELPETVVKTLLESIFNNTGGEVVIDQDGKYQILGTPTETALLEFALSLG 540
Query: 538 GDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADG 597
G+ R+E+ IVK+EPFNS KKRM V++ LP GG R CKGASEI+L CDK ++ G
Sbjct: 541 GNFKAKRDETKIVKMEPFNSTKKRMCVVLKLP-GGGCRAHCKGASEIVLAACDKFMDETG 599
Query: 598 KAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDI-KGNHKAESIPENNYTLIAVVGIKD 656
VP+ + L +I F++EALRTLCL ++++ +G E IP YT I +VGIKD
Sbjct: 600 AVVPLDKTTADKLNGIIESFANEALRTLCLGYREMEEGFSVEEQIPLQGYTCIGIVGIKD 659
Query: 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQE 716
PVRPGVRE+V TC +AGI VRMVTGDNI+TAKAIA+ECGILT+ GLAIEG +FR K+ E
Sbjct: 660 PVRPGVRESVATCRSAGIMVRMVTGDNINTAKAIARECGILTEDGLAIEGPEFREKSLDE 719
Query: 717 MQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAG 776
+ +LIPK+QVMARSSP DK+ LV LR F EVVAVTG+GTNDAPALHEADIGLAMGIAG
Sbjct: 720 LLKLIPKIQVMARSSPLDKHTLVKHLRTTFNEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
Query: 777 TEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITG 836
TEVAKE+ADVII+DDNF+TIVTVA+WGRSVY+NIQKFVQFQLTVN+VAL++NF +AC TG
Sbjct: 780 TEVAKESADVIILDDNFSTIVTVAKWGRSVYVNIQKFVQFQLTVNVVALLVNFSSACFTG 839
Query: 837 SAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIY 896
+APLTAVQLLWVNMIMDTLGALALATEPP++ LM+R P+GR FIT MWRNI+GQS Y
Sbjct: 840 NAPLTAVQLLWVNMIMDTLGALALATEPPNDDLMKREPVGRTGKFITNVMWRNILGQSFY 899
Query: 897 QIIVLGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFS 956
Q IV+ L GK + L GP+A ++LNT IFNSFVFCQVFNEI+SR+MEKINV RGI
Sbjct: 900 QFIVMWYLQTQGKSMFGLDGPDAEVVLNTIIFNSFVFCQVFNEISSREMEKINVLRGILK 959
Query: 957 SWVFIAVLVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVGT 1016
++VF+ VL +TV FQ I+V+ LG FA T+PL W+ASV++G I MP ++K +PVG+
Sbjct: 960 NYVFLGVLTSTVVFQFIMVQFLGEFANTIPLTRLQWIASVLLGLIGMPISAIIKLLPVGS 1019
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O64806|ACA7_ARATH Putative calcium-transporting ATPase 7, plasma membrane-type OS=Arabidopsis thaliana GN=ACA7 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 1292 bits (3344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 648/1018 (63%), Positives = 790/1018 (77%), Gaps = 7/1018 (0%)
Query: 1 MENYLKKNFDVDPKRPSEEALMRWRSAVRVVKNPRRRFRMVADLAKRAEAERKRKKLQEK 60
ME+YL NFDV K SEE L +WR+ VVKNP+RRFR A+L+KR EA R+ QEK
Sbjct: 1 MESYLNSNFDVKAKHSSEEVLEKWRNLCSVVKNPKRRFRFTANLSKRYEAAAMRRTNQEK 60
Query: 61 LRVALYVQKAALHFIDAGSRPIEYKLSQETLLAGYGIEPDELESIVRSHNSKAVESRGGV 120
LR+A+ V KAA FI +G P +YK+ +E AG+ I DEL SIV H+ K ++ GGV
Sbjct: 61 LRIAVLVSKAAFQFI-SGVSPSDYKVPEEVKAAGFDICADELGSIVEGHDVKKLKFHGGV 119
Query: 121 EGLAREVSVSLPDGVAS---EEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILM 177
+GL+ ++ G+++ E++S RQ ++G N++AE RSFW+FVWEAL D+TL+IL
Sbjct: 120 DGLSGKLKACPNAGLSTGEPEQLSKRQELFGINKFAESELRSFWVFVWEALQDMTLMILG 179
Query: 178 ICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIV 237
+CA VS+ VGI TEGWP G +DGLGIV SILLVV VTA SDY+QSLQF+ LDKEKK + V
Sbjct: 180 VCAFVSLIVGIATEGWPQGSHDGLGIVASILLVVFVTATSDYRQSLQFRDLDKEKKKITV 239
Query: 238 QVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINR 297
QVTR+G+R+K+SIYDL+ GD+VHL+IGDQVPADG+ +SG+S+ IDESSL+GE+EPV +
Sbjct: 240 QVTRNGFRQKMSIYDLLPGDVVHLAIGDQVPADGLFLSGFSVVIDESSLTGESEPVMVTA 299
Query: 298 DRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKI 357
PFLLSGTKVQDGS KMLVT+VGMRT+WG+LM TLSEGG+DETPLQVKLNGVAT+IGKI
Sbjct: 300 QNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 359
Query: 358 GLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAV 417
GL FA++TF VL + K WS DA++LL YFAIAVTIVVVAVPEGLPLAV
Sbjct: 360 GLSFAIVTFAVLVQGMFMRKLSLGPHWWWSGDDALELLEYFAIAVTIVVVAVPEGLPLAV 419
Query: 418 TLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTI 477
TLSLAFAMKK+MNDKALVRHL+ACETMGSA+ IC+DKTGTLTTNHM V K IC + +
Sbjct: 420 TLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSCICMNVQDV 479
Query: 478 KSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILG 537
S + L+ + +A + LQ IF NTG EVV ++ G+T ILGTPTE AILE GL LG
Sbjct: 480 ASKSSS--LQSDIPEAALKLLLQLIFNNTGGEVVVNERGKTEILGTPTETAILELGLSLG 537
Query: 538 GDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADG 597
G R+ + ++KVEPFNS KKRM V++ LP G R KGASEI+L CDK+IN+ G
Sbjct: 538 GKFQEERQSNKVIKVEPFNSTKKRMGVVIELPEGGRIRAHTKGASEIVLAACDKVINSSG 597
Query: 598 KAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKA-ESIPENNYTLIAVVGIKD 656
+ VP+ +E K L I+ F++EALRTLCLA+ DI+ A E IPE +T I +VGIKD
Sbjct: 598 EVVPLDDESIKFLNVTIDEFANEALRTLCLAYMDIESGFSADEGIPEKGFTCIGIVGIKD 657
Query: 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQE 716
PVRPGVRE+VE C AGI VRMVTGDNI+TAKAIA+ECGILTD G+AIEG FR KN +E
Sbjct: 658 PVRPGVRESVELCRRAGIMVRMVTGDNINTAKAIARECGILTDDGIAIEGPVFREKNQEE 717
Query: 717 MQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAG 776
M ELIPK+QVMARSSP DK+ LV QLR F EVVAVTG+GTNDAPALHEADIGLAMGIAG
Sbjct: 718 MLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAG 777
Query: 777 TEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITG 836
TEVAKE ADVII+DDNF+TIVTVA+WGRSVYINIQKFVQFQLTVN+VAL++NF +AC+TG
Sbjct: 778 TEVAKEIADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 837
Query: 837 SAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIY 896
SAPLTAVQLLWVNMIMDTLGALALATEPP+ LM+R P+GR +FIT MWRNI+GQ++Y
Sbjct: 838 SAPLTAVQLLWVNMIMDTLGALALATEPPNNELMKRMPVGRRGNFITNAMWRNILGQAVY 897
Query: 897 QIIVLGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFS 956
Q I++ +L GK + L G ++TL+LNT IFN FVFCQVFNE++SR+ME+I+VF+GI
Sbjct: 898 QFIIIWILQAKGKSMFGLVGSDSTLVLNTLIFNCFVFCQVFNEVSSREMEEIDVFKGILD 957
Query: 957 SWVFIAVLVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPV 1014
++VF+ V+ ATV FQ+II+E LGTFA+T PL W S+ +G + MP LK IPV
Sbjct: 958 NYVFVVVIGATVFFQIIIIEFLGTFASTTPLTIVQWFFSIFVGFLGMPIAAGLKKIPV 1015
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q65X71|ACA6_ORYSJ Probable calcium-transporting ATPase 6, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os05g0495600 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1274 bits (3297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 643/1040 (61%), Positives = 799/1040 (76%), Gaps = 30/1040 (2%)
Query: 1 MENYLKKNFDVDPKRPSEEALMRWRSAV-RVVKNPRRRFRMVADLAKRAEAERKRKKLQE 59
+E+YL + FD+ K P EA RWR AV +V+N RRRF +D+ EA+R++ ++
Sbjct: 9 IESYLNEYFDIPAKNPPGEARRRWRRAVGLIVRNRRRRFGRFSDVDAIDEAQRRKILVRV 68
Query: 60 KLRVALYVQKAALHFIDAGSRPIEYKLSQETLLAGYGIEPDELESIVR-SHNSKAVESRG 118
K +Y L E + G+ I PDEL +I + + G
Sbjct: 69 K----------------------QYHLPPELIEEGFCISPDELAAIANMREDYTMLRMHG 106
Query: 119 GVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMI 178
G+ G++R++ SL DG +++ RQ +YG NR+AEKP RSFWMFVW+ALHDLTLIIL++
Sbjct: 107 GINGISRKIKASLEDGAKETDIATRQMLYGANRHAEKPPRSFWMFVWDALHDLTLIILVV 166
Query: 179 CAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQ 238
CA VSI VG+ T+GWP G+YDG GI+LSILLVV+VTA SDY+Q+ +F LD+EK+ + ++
Sbjct: 167 CALVSIVVGLATKGWPMGIYDGFGIILSILLVVLVTATSDYQQARKFMELDREKQKIYIR 226
Query: 239 VTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRD 298
VTRD K++ ++DLVVGDI+HLSIGD VPADG+ ISG L IDESSLSGE+EPV+I+ +
Sbjct: 227 VTRDKKTKEVLVHDLVVGDILHLSIGDVVPADGLFISGDCLMIDESSLSGESEPVNISEE 286
Query: 299 RPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIG 358
RPFL +G KV DG+ KMLVT+VG RTEWG++M TL+ G DETPLQVKLNGVAT+IG+IG
Sbjct: 287 RPFLHAGNKVVDGAAKMLVTAVGTRTEWGKIMGTLNGDGVDETPLQVKLNGVATIIGQIG 346
Query: 359 LVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVT 418
LVFAVLTFLVL RFL +K H + +WS+ DA+ ++NYFAIAVTI+VVAVPEGLPLAVT
Sbjct: 347 LVFAVLTFLVLLARFLADKGMHVGLLNWSANDALTIVNYFAIAVTIIVVAVPEGLPLAVT 406
Query: 419 LSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIK 478
LSLAFAMKKLM+DKALVRHL+ACETMGSASCICTDKTGTLTTNHM+V K+WI + K +
Sbjct: 407 LSLAFAMKKLMHDKALVRHLAACETMGSASCICTDKTGTLTTNHMIVDKVWI-GDVKFVG 465
Query: 479 SGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGG 538
N +L K ++S+ V I +Q IF NT SEVVK DG+ ILG TE A+LEFGL L
Sbjct: 466 DKKNSEL-KSTISERVMAILIQGIFVNTASEVVKGDDGKNTILGLATETALLEFGLSLEE 524
Query: 539 DSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGK 598
+ +KV+PFNSVKK+MSV + LPN GG R FCKGASEIIL C+ I N DG
Sbjct: 525 HLYDDYNKLTRIKVDPFNSVKKKMSVTIQLPN-GGIRTFCKGASEIILEQCNTIHNTDGN 583
Query: 599 AVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPV 658
VP+SE Q+ N+ N+IN F+SEALRTLC+AF+D+ + I ++ YTLIAV GIKDPV
Sbjct: 584 IVPLSEMQKHNVLNIINSFASEALRTLCIAFKDMDEFPNDQPISDDGYTLIAVFGIKDPV 643
Query: 659 RPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQ 718
RPGV++AV TC+AAGI VRMVTGDNI+TAKAIAKECGILT+ G+AIEG +K+ E++
Sbjct: 644 RPGVKDAVRTCMAAGIRVRMVTGDNINTAKAIAKECGILTEDGIAIEGQQLNNKSSDELK 703
Query: 719 ELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTE 778
EL+PK+QV+ARS P DKY LVT L+++++EVVAVTG+GTNDAPALHE+DIGLAMGI GTE
Sbjct: 704 ELLPKIQVIARSLPMDKYKLVTSLKSMYQEVVAVTGDGTNDAPALHESDIGLAMGITGTE 763
Query: 779 VAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSA 838
VAKE+ADVIIMDDNF TIV VARWGR+VY+NIQKFVQFQLTVNIVAL++NFV+ACI GSA
Sbjct: 764 VAKESADVIIMDDNFETIVNVARWGRAVYLNIQKFVQFQLTVNIVALIVNFVSACIIGSA 823
Query: 839 PLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQI 898
PLTAVQLLWVNMIMDTLGALALATEPP++ +M+RPP+ R +FIT MWRNI+GQ +YQ+
Sbjct: 824 PLTAVQLLWVNMIMDTLGALALATEPPNDEMMKRPPVRRGDNFITRIMWRNILGQGLYQL 883
Query: 899 IVLGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSW 958
+VL L GKK+L + GP + +NT IFNSFVFCQVFNEIN R+MEKINV +GIF +W
Sbjct: 884 LVLATLMVIGKKLLSIEGPQSDKTINTLIFNSFVFCQVFNEINCREMEKINVLQGIFRNW 943
Query: 959 VFIAVLVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVGTCT 1018
+F+ +L ATV FQVIIVE LGTFA TVPL+ +LWL SVVIG+ISM V+LKCIPV
Sbjct: 944 IFVGILTATVIFQVIIVEFLGTFANTVPLSGELWLLSVVIGSISMIISVILKCIPVE--F 1001
Query: 1019 SAANSKHHDGYEPLPTGPDL 1038
+ N+K H GYE +P GP++
Sbjct: 1002 NKTNTKPH-GYELIPEGPEI 1020
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1039 | ||||||
| 224114183 | 1038 | autoinhibited calcium ATPase [Populus tr | 0.999 | 1.0 | 0.781 | 0.0 | |
| 225449945 | 1036 | PREDICTED: putative calcium-transporting | 0.997 | 1.0 | 0.775 | 0.0 | |
| 225449943 | 1047 | PREDICTED: putative calcium-transporting | 0.997 | 0.989 | 0.766 | 0.0 | |
| 224075794 | 1047 | autoinhibited calcium ATPase [Populus tr | 0.999 | 0.991 | 0.752 | 0.0 | |
| 255565544 | 1037 | cation-transporting atpase plant, putati | 0.998 | 1.0 | 0.756 | 0.0 | |
| 449507923 | 1039 | PREDICTED: LOW QUALITY PROTEIN: calcium- | 0.995 | 0.995 | 0.743 | 0.0 | |
| 356542922 | 1038 | PREDICTED: putative calcium-transporting | 0.997 | 0.998 | 0.725 | 0.0 | |
| 356572014 | 1035 | PREDICTED: putative calcium-transporting | 0.994 | 0.998 | 0.712 | 0.0 | |
| 356504762 | 1037 | PREDICTED: putative calcium-transporting | 0.995 | 0.997 | 0.710 | 0.0 | |
| 225441900 | 1033 | PREDICTED: calcium-transporting ATPase 4 | 0.994 | 1.0 | 0.719 | 0.0 |
| >gi|224114183|ref|XP_002332421.1| autoinhibited calcium ATPase [Populus trichocarpa] gi|222832374|gb|EEE70851.1| autoinhibited calcium ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1695 bits (4390), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 812/1039 (78%), Positives = 929/1039 (89%), Gaps = 1/1039 (0%)
Query: 1 MENYLKKNFDVDPKRPSEEALMRWRSAVRVVKNPRRRFRMVADLAKRAEAERKRKKLQEK 60
ME YLK+NF VD KRPS+EAL RWRSAV VV+NPRRRFRMVADLAKRAEAE+KR+ LQEK
Sbjct: 1 MEKYLKENFVVDAKRPSDEALRRWRSAVSVVRNPRRRFRMVADLAKRAEAEKKRQNLQEK 60
Query: 61 LRVALYVQKAALHFIDAGSRPIEYKLSQETLLAGYGIEPDELESIVRSHNSKAVESRGGV 120
+R+ALYV+KAALHFI+A +R +E+KLS G+GIEPDEL +IVRS ++KA+ES GGV
Sbjct: 61 IRIALYVKKAALHFIEAANR-VEHKLSDNVRQTGFGIEPDELAAIVRSQDNKALESHGGV 119
Query: 121 EGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICA 180
EGLAREVSVSL DGV S ++S RQN+YG N+YAEKPARS WMFVW+ALHDLTLIILM CA
Sbjct: 120 EGLAREVSVSLNDGVVSSDISIRQNIYGPNKYAEKPARSLWMFVWDALHDLTLIILMACA 179
Query: 181 AVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVT 240
VS+GVGI TEGWP+G+YDG+GIVL ILLVV+VTA+SDY+QSLQFK LDKEKKN+ VQVT
Sbjct: 180 VVSVGVGIATEGWPNGMYDGVGIVLCILLVVMVTAISDYRQSLQFKVLDKEKKNVTVQVT 239
Query: 241 RDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDRP 300
R+G R+K+SI+DLVVGD+VHLSIGD VPADGILISG+SL++DESSLSGE+EPV+IN +P
Sbjct: 240 REGRRQKVSIFDLVVGDVVHLSIGDVVPADGILISGHSLSVDESSLSGESEPVNINEKKP 299
Query: 301 FLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLV 360
FLLSGTKVQDGSGKMLVT+VGMRTEWG+LMVTLSE GEDETPLQVKLNGVAT+IGKIGL
Sbjct: 300 FLLSGTKVQDGSGKMLVTAVGMRTEWGKLMVTLSEVGEDETPLQVKLNGVATIIGKIGLA 359
Query: 361 FAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLS 420
FAV+TFLVL RFLV KA +H+I WSS DA++LLN+FAIAVTI+VVAVPEGLPLAVTLS
Sbjct: 360 FAVMTFLVLMARFLVAKAHNHEITKWSSGDALQLLNFFAIAVTIIVVAVPEGLPLAVTLS 419
Query: 421 LAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSG 480
LAFAMK+LM D+ALVRHLSACETMGSA CICTDKTGTLTTNHMVV K+WIC + K+I++
Sbjct: 420 LAFAMKQLMKDRALVRHLSACETMGSACCICTDKTGTLTTNHMVVNKIWICEKTKSIQTN 479
Query: 481 DNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDS 540
DN+ LL SVS+ V I LQSIFQNTGSEV K KDG+TNILGTPTE AI+EFGL+LGGD
Sbjct: 480 DNKDLLMSSVSEDVHGILLQSIFQNTGSEVTKGKDGKTNILGTPTETAIVEFGLLLGGDF 539
Query: 541 TFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAV 600
H ES IVKVEPFNS KK+MSVLVSLP+N FR FCKGASEIIL MCDKI+ ADGK+V
Sbjct: 540 KTHHIESEIVKVEPFNSEKKKMSVLVSLPDNSRFRAFCKGASEIILKMCDKILTADGKSV 599
Query: 601 PISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRP 660
P+SE QR+N+T+VINGF+ EALRTLC AF+DI+ A+SIP+NNYTLIAVVGIKDPVRP
Sbjct: 600 PLSENQRQNITDVINGFACEALRTLCFAFKDIEKTSDADSIPDNNYTLIAVVGIKDPVRP 659
Query: 661 GVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQEL 720
GV+EAV+TCLAAGITVRMVTGDNI+TAKAIAKECGILTD GLAIEG DFR+K+PQE++E+
Sbjct: 660 GVKEAVKTCLAAGITVRMVTGDNINTAKAIAKECGILTDTGLAIEGPDFRTKSPQELEEI 719
Query: 721 IPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVA 780
IPKLQVMARSSP DK+ LVTQLRNVFKEVVAVTG+GTNDAPAL EADIGLAMGIAGTEVA
Sbjct: 720 IPKLQVMARSSPLDKHKLVTQLRNVFKEVVAVTGDGTNDAPALAEADIGLAMGIAGTEVA 779
Query: 781 KENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPL 840
KE+ADVI+MDDNF TIV VARWGR+VYINIQKFVQFQLTVN+VAL+INF++ACI+G+APL
Sbjct: 780 KESADVIVMDDNFKTIVNVARWGRAVYINIQKFVQFQLTVNVVALMINFISACISGNAPL 839
Query: 841 TAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIV 900
T VQLLWVN+IMDTLGALALATEPPH+GLM+RPPIGRNV IT TMWRNIIGQSIYQIIV
Sbjct: 840 TTVQLLWVNLIMDTLGALALATEPPHDGLMKRPPIGRNVSIITKTMWRNIIGQSIYQIIV 899
Query: 901 LGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVF 960
L +L F GK +LKLSG +AT ILNTFIFN+FV CQVFNEINSRDMEKINVF+GIFSSW+F
Sbjct: 900 LVILQFDGKHLLKLSGSDATKILNTFIFNTFVLCQVFNEINSRDMEKINVFKGIFSSWIF 959
Query: 961 IAVLVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVGTCTSA 1020
+AV+ +TV FQ++IVE LGTFA TVPL+W+LWLAS++IGA S+ V+LKCIPV T
Sbjct: 960 LAVMFSTVVFQIVIVEFLGTFANTVPLSWELWLASILIGAASLVIAVILKCIPVETKKDD 1019
Query: 1021 ANSKHHDGYEPLPTGPDLA 1039
+KHHDGYEPLP+GPDLA
Sbjct: 1020 NTAKHHDGYEPLPSGPDLA 1038
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225449945|ref|XP_002270669.1| PREDICTED: putative calcium-transporting ATPase 11, plasma membrane-type isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1669 bits (4321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 806/1039 (77%), Positives = 920/1039 (88%), Gaps = 3/1039 (0%)
Query: 1 MENYLKKNFDVDPKRPSEEALMRWRSAVRVVKNPRRRFRMVADLAKRAEAERKRKKLQEK 60
ME YL++NFDV+PKR SEEA RWRSAV VVKNPRRRFRMVADLAKR+E ERKR+K+QEK
Sbjct: 1 MEKYLRENFDVEPKRASEEARRRWRSAVSVVKNPRRRFRMVADLAKRSETERKRQKIQEK 60
Query: 61 LRVALYVQKAALHFIDAGSRPIEYKLSQETLLAGYGIEPDELESIVRSHNSKAVESRGGV 120
+RVALYVQKAALHFI+AG R IEY LS+E AGY IEPDEL SIVR+H+ K +E GG
Sbjct: 61 IRVALYVQKAALHFIEAGHR-IEYNLSEEVRQAGYEIEPDELASIVRAHDIKGLEFNGGA 119
Query: 121 EGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICA 180
EGLA +V VSL GV + EV +RQ++YG N+Y EKP+ +FWMF+WEAL DLTLIILM+CA
Sbjct: 120 EGLAGKVCVSLDTGVKTSEVHSRQSIYGLNQYVEKPSGTFWMFIWEALQDLTLIILMVCA 179
Query: 181 AVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVT 240
AVSIGVGI TEGWP G+YDGLGIVLSI LVV+VTA SDYKQSLQFK LDKEKKN+IVQVT
Sbjct: 180 AVSIGVGIATEGWPKGMYDGLGIVLSIFLVVMVTATSDYKQSLQFKDLDKEKKNIIVQVT 239
Query: 241 RDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDRP 300
RDGYR+K+SIYDLVVGDIVHLSIGDQVPADG+ ISG+SL+IDESSLSGE+EPV+IN+ RP
Sbjct: 240 RDGYRQKISIYDLVVGDIVHLSIGDQVPADGVFISGHSLSIDESSLSGESEPVNINKQRP 299
Query: 301 FLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLV 360
FLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVAT+IGKIGL
Sbjct: 300 FLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATIIGKIGLA 359
Query: 361 FAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLS 420
FAVLTFLVL RFL++KA H I WS DA+ +LNYFAIAVTI+VVAVPEGLPLAVTLS
Sbjct: 360 FAVLTFLVLMGRFLLQKALHSNITDWSFSDAVTILNYFAIAVTIIVVAVPEGLPLAVTLS 419
Query: 421 LAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSG 480
LAFAMKKLMN KALVRHLSACETMGSASCICTDKTGTLTTNHMVV K+WIC ++K I++
Sbjct: 420 LAFAMKKLMNAKALVRHLSACETMGSASCICTDKTGTLTTNHMVVNKIWICEKSKAIETN 479
Query: 481 DNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDS 540
D++ + + + + V++I LQSIFQNTGSEVVK KDG+ ++LGTPTE AILEFGL LGG+S
Sbjct: 480 DSKDVFQSLIPEKVYSILLQSIFQNTGSEVVKGKDGKVSVLGTPTETAILEFGLHLGGES 539
Query: 541 TFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAV 600
H +ES IVKVEPFNSVKK+MSVLVSLP GGFR FCKGASEI+L MCDKIIN +G+ V
Sbjct: 540 A-HYKESEIVKVEPFNSVKKKMSVLVSLPA-GGFRAFCKGASEIVLEMCDKIINTNGEFV 597
Query: 601 PISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRP 660
+S +QRKN+T+VINGF+ EALRTLCLAF+DI+ + K + IP +NYTLIAV+GIKDPVRP
Sbjct: 598 SLSADQRKNITDVINGFACEALRTLCLAFKDIENSSKDDDIPYSNYTLIAVLGIKDPVRP 657
Query: 661 GVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQEL 720
GV++AV TCLAAGITVRMVTGDNI+TAKAIAKECGILTD GLAIEG DFR+K+PQEM+EL
Sbjct: 658 GVKDAVRTCLAAGITVRMVTGDNINTAKAIAKECGILTDDGLAIEGPDFRNKSPQEMKEL 717
Query: 721 IPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVA 780
IPKLQVMARS P DK+ LV+QLRN FKEVVAVTG+GTNDAPALHEADIGLAMGIAGTEVA
Sbjct: 718 IPKLQVMARSLPLDKHTLVSQLRNSFKEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVA 777
Query: 781 KENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPL 840
KENADVIIMDDNF+TIV VARWGRSVYINIQKFVQFQLTVNIVAL+INFV+ACI+GSAPL
Sbjct: 778 KENADVIIMDDNFSTIVNVARWGRSVYINIQKFVQFQLTVNIVALMINFVSACISGSAPL 837
Query: 841 TAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIV 900
TAVQLLWVNMIMDTLGALALATE P +GLM+R P+GRN +FIT TMWRNIIGQSIYQ+ V
Sbjct: 838 TAVQLLWVNMIMDTLGALALATEAPTDGLMKRAPVGRNANFITRTMWRNIIGQSIYQLAV 897
Query: 901 LGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVF 960
L V TF GK++LKL+G +A+ ILNTFIFN+FVFCQVFNEINSRDMEKINVF+ +FS+W+F
Sbjct: 898 LLVFTFQGKRLLKLTGSDASKILNTFIFNAFVFCQVFNEINSRDMEKINVFQDMFSNWIF 957
Query: 961 IAVLVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVGTCTSA 1020
I ++V++V FQ I+VE LGTFA TVPL+W+LWL S++IGA+S+ V+LKCIPV
Sbjct: 958 IIIVVSSVTFQAIMVEFLGTFAGTVPLSWELWLLSILIGAVSLIIAVILKCIPVEPTKYT 1017
Query: 1021 ANSKHHDGYEPLPTGPDLA 1039
A +KHHDGYEPLP+GPD A
Sbjct: 1018 AIAKHHDGYEPLPSGPDRA 1036
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225449943|ref|XP_002270771.1| PREDICTED: putative calcium-transporting ATPase 11, plasma membrane-type isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1657 bits (4292), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 805/1050 (76%), Positives = 920/1050 (87%), Gaps = 14/1050 (1%)
Query: 1 MENYLKKNFDVDPKRPSEEALMRWRSAVRVVKNPRRRFRMVADLAKRAEAERKRKKLQEK 60
ME YL++NFDV+PKR SEEA RWRSAV VVKNPRRRFRMVADLAKR+E ERKR+K+QEK
Sbjct: 1 MEKYLRENFDVEPKRASEEARRRWRSAVSVVKNPRRRFRMVADLAKRSETERKRQKIQEK 60
Query: 61 LRVALYVQKAALHFID-----------AGSRPIEYKLSQETLLAGYGIEPDELESIVRSH 109
+RVALYVQKAALHFI+ +G R IEY LS+E AGY IEPDEL SIVR+H
Sbjct: 61 IRVALYVQKAALHFIEGMNSIESPKMNSGHR-IEYNLSEEVRQAGYEIEPDELASIVRAH 119
Query: 110 NSKAVESRGGVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALH 169
+ K +E GG EGLA +V VSL GV + EV +RQ++YG N+Y EKP+ +FWMF+WEAL
Sbjct: 120 DIKGLEFNGGAEGLAGKVCVSLDTGVKTSEVHSRQSIYGLNQYVEKPSGTFWMFIWEALQ 179
Query: 170 DLTLIILMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALD 229
DLTLIILM+CAAVSIGVGI TEGWP G+YDGLGIVLSI LVV+VTA SDYKQSLQFK LD
Sbjct: 180 DLTLIILMVCAAVSIGVGIATEGWPKGMYDGLGIVLSIFLVVMVTATSDYKQSLQFKDLD 239
Query: 230 KEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGE 289
KEKKN+IVQVTRDGYR+K+SIYDLVVGDIVHLSIGDQVPADG+ ISG+SL+IDESSLSGE
Sbjct: 240 KEKKNIIVQVTRDGYRQKISIYDLVVGDIVHLSIGDQVPADGVFISGHSLSIDESSLSGE 299
Query: 290 TEPVHINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNG 349
+EPV+IN+ RPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNG
Sbjct: 300 SEPVNINKQRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNG 359
Query: 350 VATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAV 409
VAT+IGKIGL FAVLTFLVL RFL++KA H I WS DA+ +LNYFAIAVTI+VVAV
Sbjct: 360 VATIIGKIGLAFAVLTFLVLMGRFLLQKALHSNITDWSFSDAVTILNYFAIAVTIIVVAV 419
Query: 410 PEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLW 469
PEGLPLAVTLSLAFAMKKLMN KALVRHLSACETMGSASCICTDKTGTLTTNHMVV K+W
Sbjct: 420 PEGLPLAVTLSLAFAMKKLMNAKALVRHLSACETMGSASCICTDKTGTLTTNHMVVNKIW 479
Query: 470 ICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAI 529
IC ++K I++ D++ + + + + V++I LQSIFQNTGSEVVK KDG+ ++LGTPTE AI
Sbjct: 480 ICEKSKAIETNDSKDVFQSLIPEKVYSILLQSIFQNTGSEVVKGKDGKVSVLGTPTETAI 539
Query: 530 LEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMC 589
LEFGL LGG+S H +ES IVKVEPFNSVKK+MSVLVSLP GGFR FCKGASEI+L MC
Sbjct: 540 LEFGLHLGGESA-HYKESEIVKVEPFNSVKKKMSVLVSLPA-GGFRAFCKGASEIVLEMC 597
Query: 590 DKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLI 649
DKIIN +G+ V +S +QRKN+T+VINGF+ EALRTLCLAF+DI+ + K + IP +NYTLI
Sbjct: 598 DKIINTNGEFVSLSADQRKNITDVINGFACEALRTLCLAFKDIENSSKDDDIPYSNYTLI 657
Query: 650 AVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDF 709
AV+GIKDPVRPGV++AV TCLAAGITVRMVTGDNI+TAKAIAKECGILTD GLAIEG DF
Sbjct: 658 AVLGIKDPVRPGVKDAVRTCLAAGITVRMVTGDNINTAKAIAKECGILTDDGLAIEGPDF 717
Query: 710 RSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG 769
R+K+PQEM+ELIPKLQVMARS P DK+ LV+QLRN FKEVVAVTG+GTNDAPALHEADIG
Sbjct: 718 RNKSPQEMKELIPKLQVMARSLPLDKHTLVSQLRNSFKEVVAVTGDGTNDAPALHEADIG 777
Query: 770 LAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINF 829
LAMGIAGTEVAKENADVIIMDDNF+TIV VARWGRSVYINIQKFVQFQLTVNIVAL+INF
Sbjct: 778 LAMGIAGTEVAKENADVIIMDDNFSTIVNVARWGRSVYINIQKFVQFQLTVNIVALMINF 837
Query: 830 VAACITGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRN 889
V+ACI+GSAPLTAVQLLWVNMIMDTLGALALATE P +GLM+R P+GRN +FIT TMWRN
Sbjct: 838 VSACISGSAPLTAVQLLWVNMIMDTLGALALATEAPTDGLMKRAPVGRNANFITRTMWRN 897
Query: 890 IIGQSIYQIIVLGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKIN 949
IIGQSIYQ+ VL V TF GK++LKL+G +A+ ILNTFIFN+FVFCQVFNEINSRDMEKIN
Sbjct: 898 IIGQSIYQLAVLLVFTFQGKRLLKLTGSDASKILNTFIFNAFVFCQVFNEINSRDMEKIN 957
Query: 950 VFRGIFSSWVFIAVLVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISMPFGVLL 1009
VF+ +FS+W+FI ++V++V FQ I+VE LGTFA TVPL+W+LWL S++IGA+S+ V+L
Sbjct: 958 VFQDMFSNWIFIIIVVSSVTFQAIMVEFLGTFAGTVPLSWELWLLSILIGAVSLIIAVIL 1017
Query: 1010 KCIPVGTCTSAANSKHHDGYEPLPTGPDLA 1039
KCIPV A +KHHDGYEPLP+GPD A
Sbjct: 1018 KCIPVEPTKYTAIAKHHDGYEPLPSGPDRA 1047
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224075794|ref|XP_002304770.1| autoinhibited calcium ATPase [Populus trichocarpa] gi|222842202|gb|EEE79749.1| autoinhibited calcium ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1626 bits (4210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 789/1048 (75%), Positives = 909/1048 (86%), Gaps = 10/1048 (0%)
Query: 1 MENYLKKNFDVDPKRPSEEALMRWRSAVRVVKNPRRRFRMVADLAKRAEAERKRKKLQEK 60
ME YLK+NF VD KRPSE+AL RWRSAV VV+NPRRRFRMVADLAKRAEAERKRK LQEK
Sbjct: 1 MEQYLKENFVVDAKRPSEQALRRWRSAVSVVRNPRRRFRMVADLAKRAEAERKRKNLQEK 60
Query: 61 LRVALYVQKAALHFIDAGSRPIEYKLSQETLLAGYGIEPDELESIVRSHNSKAVESRGGV 120
+R+ALYV KAALHFI+A ++ +E+KLS G+GI PDEL ++ RSH+ +ES GGV
Sbjct: 61 IRIALYVNKAALHFIEA-AKVVEHKLSDNVRQTGFGIGPDELAALARSHDINDLESHGGV 119
Query: 121 EGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICA 180
EGLAREVS SL DGV S ++S RQN+YGFNRYAEKPARSFWMFVW+ALHDLTL+ILM+CA
Sbjct: 120 EGLAREVSASLNDGVVSSDISLRQNIYGFNRYAEKPARSFWMFVWDALHDLTLVILMVCA 179
Query: 181 AVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVT 240
VSIGVGI T+GWP+G+YDG+GIV+ ILLVV+VTA++DYKQ+LQFK LDKEKKN+IVQVT
Sbjct: 180 VVSIGVGIATDGWPNGMYDGVGIVICILLVVMVTAITDYKQALQFKVLDKEKKNVIVQVT 239
Query: 241 RDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDRP 300
R+G R+K+SI+DLVVGD+VHLSIGD VPADGILISG+SL++DESSLSGE+E V IN+ RP
Sbjct: 240 REGIRQKVSIFDLVVGDVVHLSIGDLVPADGILISGHSLSVDESSLSGESELVDINKKRP 299
Query: 301 FLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLV 360
FLLSGTK+QDGSGKMLVT+VGMRTEWG LMV LSE +DETPLQVKLNGVAT+IGKIGL
Sbjct: 300 FLLSGTKIQDGSGKMLVTAVGMRTEWGTLMVHLSEVDQDETPLQVKLNGVATIIGKIGLA 359
Query: 361 FAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLS 420
FAV+TFLVL +RFL+ KA HH+I WSS DA+KLLN+F+I+VTI+VVAVPEGLPLAVTLS
Sbjct: 360 FAVITFLVLLVRFLLVKADHHEITKWSSSDALKLLNFFSISVTIIVVAVPEGLPLAVTLS 419
Query: 421 LAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSG 480
LAFAMKKLM+D+ALVRHLSACETMGS CICTDKTGTLTTNHMVV K+WIC E K+I++
Sbjct: 420 LAFAMKKLMHDRALVRHLSACETMGSVCCICTDKTGTLTTNHMVVNKIWICEETKSIQTN 479
Query: 481 DNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDS 540
N+ LL S S+ V I LQSIFQNTGSEV K KDGR NILGTPTE AILEFGLILGG+
Sbjct: 480 SNKDLLMSSFSENVHGILLQSIFQNTGSEVTKGKDGRDNILGTPTETAILEFGLILGGEF 539
Query: 541 TFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAV 600
+ ES IVKVEPFNS KK+MSVLVSLPNNGGFR FCKGASEIIL MCDK++ ADGKAV
Sbjct: 540 KTYHNESEIVKVEPFNSEKKKMSVLVSLPNNGGFRAFCKGASEIILKMCDKMLTADGKAV 599
Query: 601 PISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRP 660
P+SE+QR+ +T+VINGF+ EALRTLCLAF+D++ A S+P+NNYTLIAVVGIKDP+RP
Sbjct: 600 PLSEKQRQKITDVINGFACEALRTLCLAFKDMENTSGANSMPDNNYTLIAVVGIKDPIRP 659
Query: 661 GVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQEL 720
V+EAV+TCL AGITVRMVTGDNI+TAKAIA+ECGILTD GL IEG DFR K+PQE++E+
Sbjct: 660 EVKEAVKTCLDAGITVRMVTGDNINTAKAIARECGILTDYGLVIEGADFRCKSPQELEEI 719
Query: 721 IPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVA 780
IP LQVMARSSP+DK+ LVTQLR+VFKEVVAVTG+GTNDAPAL EADIGLAMGIAGTEVA
Sbjct: 720 IPNLQVMARSSPSDKHKLVTQLRSVFKEVVAVTGDGTNDAPALAEADIGLAMGIAGTEVA 779
Query: 781 KENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITG---- 836
KE+ADVI+MDDNF TIV VARWGRSVYINIQKFVQFQLTVN+ AL+INF++A
Sbjct: 780 KESADVIVMDDNFKTIVNVARWGRSVYINIQKFVQFQLTVNVAALMINFISAIRLSLNSP 839
Query: 837 -----SAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNII 891
PLT VQLLWVN+IMDTLGALALATEPPH+GLM+RPPIGRNV+ IT TMWRNII
Sbjct: 840 FQDACDEPLTTVQLLWVNLIMDTLGALALATEPPHDGLMKRPPIGRNVNIITKTMWRNII 899
Query: 892 GQSIYQIIVLGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVF 951
GQSIYQI VL +L GK +LKLS + T ILNTFIFN+FV CQVFNEINSRDMEKINVF
Sbjct: 900 GQSIYQISVLVILQLDGKHLLKLSDSDDTKILNTFIFNTFVLCQVFNEINSRDMEKINVF 959
Query: 952 RGIFSSWVFIAVLVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKC 1011
+GIFSSW+F+AV+ +TV FQ++IVE LGT+A TVPL W+LWLASV+IGA S+ V+LKC
Sbjct: 960 KGIFSSWIFLAVMFSTVTFQIVIVEFLGTYANTVPLRWELWLASVLIGAASLVISVILKC 1019
Query: 1012 IPVGTCTSAANSKHHDGYEPLPTGPDLA 1039
IPVGT +KHHDGYEPLP+GPD+A
Sbjct: 1020 IPVGTNKDDNTAKHHDGYEPLPSGPDMA 1047
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255565544|ref|XP_002523762.1| cation-transporting atpase plant, putative [Ricinus communis] gi|223536974|gb|EEF38611.1| cation-transporting atpase plant, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1614 bits (4180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 786/1039 (75%), Positives = 908/1039 (87%), Gaps = 2/1039 (0%)
Query: 1 MENYLKKNFDVDPKRPSEEALMRWRSAVRVVKNPRRRFRMVADLAKRAEAERKRKKLQEK 60
ME YLK+NFDV+ KRPSEEAL RWRSAV +VKNPRRRFRMVADLAKRAEAERKR KLQEK
Sbjct: 1 MEKYLKENFDVEGKRPSEEALRRWRSAVSIVKNPRRRFRMVADLAKRAEAERKRVKLQEK 60
Query: 61 LRVALYVQKAALHFIDAGSRPIEYKLSQETLLAGYGIEPDELESIVRSHNSKAVESRGGV 120
+RVALYVQKAALHFIDA +R +YKL+ AG+ +EPD L SIVR H+SK +++ GGV
Sbjct: 61 IRVALYVQKAALHFIDAVNRN-DYKLTDYVRQAGFEVEPDHLASIVRIHDSKGLKTHGGV 119
Query: 121 EGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICA 180
EGLAREV+VSL DG+ +VS RQ ++G N+YAEKP+RSFWMFVWEALHDLTLI+L++CA
Sbjct: 120 EGLAREVAVSLTDGIVPSDVSLRQKIFGLNQYAEKPSRSFWMFVWEALHDLTLIVLIVCA 179
Query: 181 AVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVT 240
+SIGVGI TEGWP G+YDGLGIVL ILLVVIVTA SDYKQSLQFK LDKEKKN++VQVT
Sbjct: 180 VISIGVGIATEGWPKGMYDGLGIVLCILLVVIVTASSDYKQSLQFKVLDKEKKNVLVQVT 239
Query: 241 RDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDRP 300
R+G R+K+SIYDLVVGDIVH SIGD VPADG+LISG+SL +DESSLSGE+EPV +++DRP
Sbjct: 240 REGCRQKVSIYDLVVGDIVHFSIGDIVPADGVLISGHSLCMDESSLSGESEPVDVSKDRP 299
Query: 301 FLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLV 360
FLLSGTKVQ+GSGKMLVT+VGMRTEWGRLMVTLSE GEDETPLQVKLNGVAT+IGKIGL
Sbjct: 300 FLLSGTKVQNGSGKMLVTAVGMRTEWGRLMVTLSETGEDETPLQVKLNGVATIIGKIGLA 359
Query: 361 FAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLS 420
FAV TFLV+ RFL+ KA+HH+I WS+ DAM++LN+FA+AVTI+VVAVPEGLPLAVTLS
Sbjct: 360 FAVTTFLVMMGRFLLAKARHHEITEWSASDAMQVLNFFAVAVTIIVVAVPEGLPLAVTLS 419
Query: 421 LAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSG 480
LAFAMKKLMND+ALVRHLSACETMGSASCICTDKTGTLTTNHMVV K+WIC+E K+I S
Sbjct: 420 LAFAMKKLMNDRALVRHLSACETMGSASCICTDKTGTLTTNHMVVNKIWICDETKSIGSN 479
Query: 481 DNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDS 540
+ + +L S++ V +I LQSIFQNT SEV K KDG+TNILGTPTE AILEFGL LGGD
Sbjct: 480 EYQDVLF-SMNKVVQDILLQSIFQNTASEVAKGKDGKTNILGTPTETAILEFGLQLGGDF 538
Query: 541 TFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAV 600
HR++S IVKVEPFNS KK+MSVLVSLPNN GFR F KGASEIIL MCDK++ DG+ +
Sbjct: 539 KVHRKDSDIVKVEPFNSDKKKMSVLVSLPNNRGFRAFSKGASEIILRMCDKLVGKDGETI 598
Query: 601 PISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRP 660
+SE QR +T+ IN F+ +ALRTLCLA++DI+ ++IPE+NYTLIAV+GIKDPVRP
Sbjct: 599 TLSEVQRNKITDFINDFACQALRTLCLAYKDIENLSNKDAIPEDNYTLIAVIGIKDPVRP 658
Query: 661 GVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQEL 720
GV+EAV+TCLAAGITVRMVTGDNI+TAKAIA+ECGILT G+AIEG DFR+K+ QEM+E+
Sbjct: 659 GVKEAVKTCLAAGITVRMVTGDNINTAKAIARECGILTGNGVAIEGPDFRNKSTQEMEEI 718
Query: 721 IPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVA 780
IPKLQVMARSSP+DK+ LVTQLRNVFKEVVAVTG+GTNDAPAL EADIGLAMGIAGTEVA
Sbjct: 719 IPKLQVMARSSPSDKHKLVTQLRNVFKEVVAVTGDGTNDAPALAEADIGLAMGIAGTEVA 778
Query: 781 KENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPL 840
KE+ADVI+MDDNFTTIV VARWGRSVYINIQKFVQFQLTVN+VAL+INF++AC +G APL
Sbjct: 779 KESADVIVMDDNFTTIVNVARWGRSVYINIQKFVQFQLTVNVVALMINFISACASGDAPL 838
Query: 841 TAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIV 900
T VQLLWVN+IMDTLGALALATEPPH+GLM+RPPIGRN +FIT MWRNIIGQSIYQI+V
Sbjct: 839 TTVQLLWVNLIMDTLGALALATEPPHDGLMKRPPIGRNRNFITKIMWRNIIGQSIYQIVV 898
Query: 901 LGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVF 960
L + F GK++LKL+G +AT +LNTFIFN+FVFCQVFNEINSRDMEKINVF +F SWVF
Sbjct: 899 LVLFQFYGKQLLKLTGSDATDVLNTFIFNTFVFCQVFNEINSRDMEKINVFWRVFDSWVF 958
Query: 961 IAVLVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVGTCTSA 1020
+ V+ +TV FQ++IVELLG FA TVPL+W LW+ASV+IGA S+ +LKCIPV
Sbjct: 959 LGVMFSTVAFQIVIVELLGAFADTVPLSWGLWMASVLIGAASLVVACVLKCIPVEISEGQ 1018
Query: 1021 ANSKHHDGYEPLPTGPDLA 1039
KHHDGYEPLP GPD A
Sbjct: 1019 EVGKHHDGYEPLPYGPDQA 1037
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449507923|ref|XP_004163168.1| PREDICTED: LOW QUALITY PROTEIN: calcium-transporting ATPase 4, plasma membrane-type-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1607 bits (4162), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 772/1038 (74%), Positives = 912/1038 (87%), Gaps = 4/1038 (0%)
Query: 1 MENYLKKNFDVDPKRPSEEALMRWRSAVRVVKNPRRRFRMVADLAKRAEAERKRKKLQEK 60
+ENYL+KNFD+D K PSEEA MRWRSAV +VKN RRRFRMVADL KRA+A KR+KLQEK
Sbjct: 5 IENYLRKNFDLDSKSPSEEAQMRWRSAVSIVKNRRRRFRMVADLEKRAKAGEKRRKLQEK 64
Query: 61 LRVALYVQKAALHFIDAGSRPIEYKLSQETLLAGYGIEPDELESIVRSHNSKAVESRGGV 120
+RVALYVQKAALHFIDAG R +Y+LS E AGYG+EPD L S+V++HN+K++E GGV
Sbjct: 65 IRVALYVQKAALHFIDAGKRG-DYRLSTEVREAGYGVEPDALASMVQTHNTKSLEHYGGV 123
Query: 121 EGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICA 180
GLARE++VSL DG+ + E+ +RQN+YG NRY EKP+R FWMFVWEALHDLTL+IL++ A
Sbjct: 124 RGLARELNVSLKDGIVTSEIPSRQNIYGINRYVEKPSRGFWMFVWEALHDLTLVILLVSA 183
Query: 181 AVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVT 240
VSIGVG TEGWP G+YDGLGI++SI LVVIVTAVSDY QSLQFK L+K+K N+I+QVT
Sbjct: 184 VVSIGVGNATEGWPKGMYDGLGIIMSIFLVVIVTAVSDYNQSLQFKDLEKQKXNIIIQVT 243
Query: 241 RDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDRP 300
RDG R+K+SIYDLVVGDIVHLSIGDQVPADGIL+SGYSL+IDESSLSGE+EPV+++ +RP
Sbjct: 244 RDGCRQKVSIYDLVVGDIVHLSIGDQVPADGILVSGYSLSIDESSLSGESEPVNVDDNRP 303
Query: 301 FLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLV 360
FLL+GTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGG+DETPLQVKLNGVAT+IGKIGLV
Sbjct: 304 FLLAGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGDDETPLQVKLNGVATIIGKIGLV 363
Query: 361 FAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLS 420
FAVLTF+VL R++V KA H+QI+HWSS DA LLNYFAIAV I+VVAVPEGLPLAVTLS
Sbjct: 364 FAVLTFIVLISRYIVFKALHNQIEHWSSKDASTLLNYFAIAVIIIVVAVPEGLPLAVTLS 423
Query: 421 LAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSG 480
LAFAMK+LM DKALVRHLSACETMGSA+CICTDKTGTLTTNHMVV K+WIC E +T K+
Sbjct: 424 LAFAMKRLMKDKALVRHLSACETMGSATCICTDKTGTLTTNHMVVDKMWICEETRTTKNS 483
Query: 481 DNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDS 540
D+E LK SV++ V+N+ +QSIFQNT SEVVK KDGR ILGTPTE A+LEFGL++GG
Sbjct: 484 DDETALKSSVNETVYNLLIQSIFQNTSSEVVKGKDGRNTILGTPTETALLEFGLLMGGAF 543
Query: 541 TFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAV 600
+E I+KVEPFNS +K+MSVLV+LP GGFR FCKGASEIIL+MCDK+++A+G+A+
Sbjct: 544 GTLNDEYKIIKVEPFNSNRKKMSVLVALP-TGGFRAFCKGASEIILSMCDKVLSANGEAL 602
Query: 601 PISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRP 660
P+S+E+R N++N+I F++ ALRTLC+A++DI+ + + IP++N+TLIAVVGIKDPVRP
Sbjct: 603 PLSDEKRINISNIIYSFANGALRTLCIAYKDIEVSSAPDKIPDSNFTLIAVVGIKDPVRP 662
Query: 661 GVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQEL 720
GV+EAV+ CLAAGITVRMVTGDNI+TA+AIAKECGILT+ GLAIEG +FR+K+ EM+ L
Sbjct: 663 GVKEAVQACLAAGITVRMVTGDNINTARAIAKECGILTEDGLAIEGPEFRNKSQDEMEML 722
Query: 721 IPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVA 780
IPKLQVMARSSP DK++LV QLR FKEVVAVTG+GTNDAPALHEADIGLAMGIAGTEVA
Sbjct: 723 IPKLQVMARSSPLDKHMLVGQLRKTFKEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVA 782
Query: 781 KENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPL 840
KENADV+IMDDNFTTIV VARWGR+VYINIQKFVQFQLTVN+VAL++NF++AC +GSAPL
Sbjct: 783 KENADVVIMDDNFTTIVNVARWGRAVYINIQKFVQFQLTVNVVALMLNFISACASGSAPL 842
Query: 841 TAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIV 900
TAVQ+LWVN+IMDTLGALALATEPP+EGLMQR PIGRNV+ IT MWRNIIGQSIYQI V
Sbjct: 843 TAVQMLWVNLIMDTLGALALATEPPNEGLMQRKPIGRNVNIITGIMWRNIIGQSIYQITV 902
Query: 901 LGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVF 960
L +L F GK++L L+G ++++IL+TFIFNSFVFCQVFNEINSRDMEKINV +GIF SWVF
Sbjct: 903 LLILRFEGKRLLNLTGSDSSIILDTFIFNSFVFCQVFNEINSRDMEKINVLKGIFGSWVF 962
Query: 961 IAVLVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVGTCTSA 1020
I V+ +TVGFQ+IIVE LGTFA TV L+ LW+AS+VIGA+S+P ++LKCIPV +
Sbjct: 963 IGVMASTVGFQIIIVEFLGTFAETVGLSLNLWIASIVIGALSLPIAMVLKCIPV--SNTK 1020
Query: 1021 ANSKHHDGYEPLPTGPDL 1038
S HDGYEPLPTGPD
Sbjct: 1021 TTSHFHDGYEPLPTGPDF 1038
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356542922|ref|XP_003539913.1| PREDICTED: putative calcium-transporting ATPase 11, plasma membrane-type-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1557 bits (4031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 755/1041 (72%), Positives = 899/1041 (86%), Gaps = 5/1041 (0%)
Query: 1 MENYLKKNFDVDPKRPSEEALMRWRSAVRVVKNPRRRFRMVADLAKRAEAERKRKKLQEK 60
ME YL++NF V PK PSE+AL+RWRSAV VVKNPRRRFRMVA+LA+RA+AE+KRKKLQEK
Sbjct: 1 MEKYLRENFSVQPKNPSEDALLRWRSAVSVVKNPRRRFRMVANLAQRADAEQKRKKLQEK 60
Query: 61 LRVALYVQKAALHFIDAGSRPIEYKLSQETLLAGYGIEPDELESIVRSHNSKAVESRGGV 120
+RVALYVQKAAL FI+AG+R LS+E AG+GIEPDEL SIVRSH++K +E GV
Sbjct: 61 IRVALYVQKAALQFINAGNRGGGSMLSKEIQEAGFGIEPDELASIVRSHDTKCLEHHEGV 120
Query: 121 EGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICA 180
EGLAR V VSL GV + +V +RQNVYGFNR+AE P RSFWMFVW+A+ DLTLIILM+C+
Sbjct: 121 EGLARAVRVSLQQGVNTLDVQHRQNVYGFNRHAENPPRSFWMFVWDAMQDLTLIILMVCS 180
Query: 181 AVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVT 240
VS+GVGI TEGWP G+YDG+GI+L ILLVV VT++ DYKQSLQFK LDKEKKN+ +QVT
Sbjct: 181 FVSVGVGILTEGWPKGMYDGVGIILCILLVVFVTSICDYKQSLQFKDLDKEKKNVSIQVT 240
Query: 241 RDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDRP 300
RD R+K+SI+DLVVGDIVHLSIGD VPADG+ SG+ L IDESSLSGE+E V++++++P
Sbjct: 241 RDSKRQKVSIHDLVVGDIVHLSIGDIVPADGLFTSGFGLLIDESSLSGESEAVNVDQEKP 300
Query: 301 FLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLV 360
FLLSGT VQDGS KMLVTSVG+RTEWGRLM TL+EGG+DETPLQVKLNGVAT+IGKIGL
Sbjct: 301 FLLSGTMVQDGSAKMLVTSVGVRTEWGRLMDTLNEGGDDETPLQVKLNGVATIIGKIGLC 360
Query: 361 FAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLS 420
FA++TF+VL RFL K HH+I WS DA LLN+FA AV I+VVAVPEGLPLAVTLS
Sbjct: 361 FAIVTFMVLTGRFLCGKIAHHEITKWSLNDASSLLNFFATAVIIIVVAVPEGLPLAVTLS 420
Query: 421 LAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSG 480
LAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVV K+WIC + K IK G
Sbjct: 421 LAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVDKIWICQQTKAIKIG 480
Query: 481 DNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDS 540
++E +LK S+S+ + ++ LQSIFQNTGSE+VK +DGR I+GTPTE A+LEFGL+LGGDS
Sbjct: 481 NSENVLKSSISEHISDLLLQSIFQNTGSEIVKGQDGRNKIMGTPTESALLEFGLLLGGDS 540
Query: 541 TFHREESAIVKVEPFNSVKKRMSVLVSLPN-NGGFRVFCKGASEIILNMCDKIINADGKA 599
F+ ++ IVKVEPFNS++K+MSVLV+LP+ +R FCKGASEI++ MC+K++NADGK
Sbjct: 541 KFYNDKYKIVKVEPFNSIRKKMSVLVALPDGTNKYRAFCKGASEIVVKMCEKVVNADGKV 600
Query: 600 VPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVR 659
V ++E+QR ++T VINGF+S+ALRTLC+AF+DI+G+ ++SIPE+ YTLIA++GIKDPVR
Sbjct: 601 VQLNEQQRNSVTEVINGFASQALRTLCIAFKDIEGSSGSDSIPEDKYTLIAIIGIKDPVR 660
Query: 660 PGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQE 719
PGV+EAV+TCL AGI VRMVTGDNI+TAKAIA+ECGILTD G+AIEG DFR+K+PQE+
Sbjct: 661 PGVKEAVKTCLEAGIVVRMVTGDNINTAKAIARECGILTD-GIAIEGPDFRNKSPQELMN 719
Query: 720 LIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEV 779
+IPK+QVMARS P DK+ LV LR+ F EVVAVTG+GTNDAPALHEADIGLAMGIAGTEV
Sbjct: 720 IIPKIQVMARSLPLDKHTLVKHLRDDFYEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 779
Query: 780 AKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAP 839
AKENADVI+MDDNF TIV V RWGR+VYINIQKFVQFQLTVN+VAL++NFV+AC++GSAP
Sbjct: 780 AKENADVIVMDDNFATIVNVTRWGRAVYINIQKFVQFQLTVNVVALMLNFVSACVSGSAP 839
Query: 840 LTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQII 899
LTAVQ+LWVNMIMDTLGALALATEPPH+GLM+ PP+GRN IT MWRNIIGQSIYQII
Sbjct: 840 LTAVQMLWVNMIMDTLGALALATEPPHDGLMKMPPVGRNAKIITRVMWRNIIGQSIYQII 899
Query: 900 VLGVLTFCGKKILKLSGP-NATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSW 958
VL VL F GK+ILKL+GP +ATL+LNT IFN+FVFCQVFNEINSRDMEKINV +G+ SSW
Sbjct: 900 VLLVLKFRGKQILKLNGPDDATLLLNTVIFNTFVFCQVFNEINSRDMEKINVLQGMLSSW 959
Query: 959 VFIAVLVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVGTCT 1018
VF+ V+ AT+GFQ IIV+ LG FA TVPL+ +LWL SV+IGA+S+ GV+LKCIPV +
Sbjct: 960 VFLMVMAATIGFQAIIVQYLGAFAQTVPLSQELWLTSVMIGAVSIVVGVVLKCIPVPSSN 1019
Query: 1019 SAANSKHHDGYEPLPTGPDLA 1039
A HHDGYE LP+GP+LA
Sbjct: 1020 YIAT--HHDGYEQLPSGPELA 1038
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356572014|ref|XP_003554165.1| PREDICTED: putative calcium-transporting ATPase 11, plasma membrane-type-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1543 bits (3996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 742/1041 (71%), Positives = 884/1041 (84%), Gaps = 8/1041 (0%)
Query: 1 MENYLKKNFDVDPKRPSEEALMRWRSAVRVVKNPRRRFRMVADLAKRAEAERKRKKLQEK 60
ME L KNF+++ K PS EAL RWRSAV VKN RRRFRMVADL KR EAE+ ++ ++EK
Sbjct: 1 MERTLLKNFELEHKNPSVEALRRWRSAVTFVKNHRRRFRMVADLDKRVEAEQIKQGIKEK 60
Query: 61 LRVALYVQKAALHFIDAGSRPIEYKLSQETLLAGYGIEPDELESIVRSHNSKAVESRGGV 120
R+ALYVQKAAL FIDAG+R +EYKLS E AG+GI PDE+ SIVR H++K + GGV
Sbjct: 61 FRIALYVQKAALQFIDAGNR-VEYKLSSEVRDAGFGIHPDEIASIVRGHDNKTLNDIGGV 119
Query: 121 EGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICA 180
E +AR++ VS+ GV E +++RQ +YGFNRY EKP+RSF MFVW+AL DLTLIILM+CA
Sbjct: 120 ESIARKLLVSVDGGVNEESINSRQQIYGFNRYTEKPSRSFLMFVWDALQDLTLIILMVCA 179
Query: 181 AVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVT 240
VSIG+GI TEGWP G YDG+GI+LSI LVVIVTAVSDYKQSLQF+ LDKEKK + VQV
Sbjct: 180 VVSIGIGIATEGWPKGTYDGVGIILSIFLVVIVTAVSDYKQSLQFRDLDKEKKKIFVQVN 239
Query: 241 RDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDRP 300
RDG R+K+SIYD+VVGD+VHLS GDQVPADGI ISGYSL IDESSLSGE+EPV+IN ++P
Sbjct: 240 RDGKRQKISIYDIVVGDVVHLSTGDQVPADGIFISGYSLLIDESSLSGESEPVNINEEKP 299
Query: 301 FLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLV 360
FLLSGTKVQDG GKMLVT+VGMRTEWG+LM TL++GGEDETPLQVKLNGVAT+IG+IGL
Sbjct: 300 FLLSGTKVQDGQGKMLVTTVGMRTEWGKLMETLNQGGEDETPLQVKLNGVATIIGQIGLT 359
Query: 361 FAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLS 420
FA+LTF+VL +RF+VEKA H + WSS DA KLL++FAIAVTI+VVAVPEGLPLAVTLS
Sbjct: 360 FAILTFVVLTVRFVVEKALHGEFASWSSDDAKKLLDFFAIAVTIIVVAVPEGLPLAVTLS 419
Query: 421 LAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSG 480
LAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTN MVVTK WIC ++ IK
Sbjct: 420 LAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNKMVVTKAWICEKSMEIKGN 479
Query: 481 DNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGG-- 538
++ LK S+ V NI LQ+IFQNT +EVVKDK+G+ ILGTPTE A+LEFG +LG
Sbjct: 480 ESADELKTCTSEGVLNILLQAIFQNTSAEVVKDKNGKDTILGTPTESALLEFGCLLGADF 539
Query: 539 DSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGK 598
D+ R E I++VEPFNSV+K+MSVLV LP +GG R FCKGASEIIL MCDKI++ +G+
Sbjct: 540 DAYAQRREYKILQVEPFNSVRKKMSVLVGLP-DGGVRAFCKGASEIILKMCDKIMDCNGE 598
Query: 599 AVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPV 658
V + E++ N++ VIN F+SEALRT+CLAF++I H+ +I ++ YT IA+VGIKDPV
Sbjct: 599 VVDLPEDRANNVSAVINAFASEALRTICLAFKEINETHEP-NISDSGYTFIALVGIKDPV 657
Query: 659 RPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQ 718
RPGV+EA++TC+AAGIT+RMVTGDNI+TAKAIAKECG+LT+GGLAIEG DFR +P++M+
Sbjct: 658 RPGVKEAIQTCIAAGITIRMVTGDNINTAKAIAKECGLLTEGGLAIEGPDFRDLSPEQMK 717
Query: 719 ELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTE 778
++IP++QVMARS P DK+ LVT LR +F EVVAVTG+GTNDAPAL EADIGLAMGIAGTE
Sbjct: 718 DVIPRIQVMARSLPLDKHRLVTNLRKLFGEVVAVTGDGTNDAPALCEADIGLAMGIAGTE 777
Query: 779 VAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSA 838
VAKENADVIIMDDNFTTIV V +WGR+VYINIQKFVQFQLTVN+VALVINF +ACITGSA
Sbjct: 778 VAKENADVIIMDDNFTTIVNVVKWGRAVYINIQKFVQFQLTVNVVALVINFFSACITGSA 837
Query: 839 PLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQI 898
PLTAVQLLWVN+IMDTLGALALATEPP++GL++RPP+ R +FIT MWRNIIGQSIYQ+
Sbjct: 838 PLTAVQLLWVNLIMDTLGALALATEPPNDGLLKRPPVARGANFITKPMWRNIIGQSIYQL 897
Query: 899 IVLGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSW 958
I+LG+L F GK++L LSG +AT +LNT IFNSFVFCQVFNEINSRD++KIN+FRG+F S
Sbjct: 898 IILGILNFDGKRLLGLSGSDATKVLNTLIFNSFVFCQVFNEINSRDIDKINIFRGMFDSR 957
Query: 959 VFIAVLVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVGTCT 1018
+F+A++ ATV FQV+IVE LGTFA+TVPLNW+ WL SVVIGA+SMP +LKCIPV T
Sbjct: 958 IFLAIIFATVAFQVVIVEFLGTFASTVPLNWQFWLLSVVIGAVSMPIAAILKCIPVERDT 1017
Query: 1019 SAANSKHHDGYEPLPTGPDLA 1039
S +HHDGYE LP+GP+LA
Sbjct: 1018 S---KQHHDGYEALPSGPELA 1035
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356504762|ref|XP_003521164.1| PREDICTED: putative calcium-transporting ATPase 11, plasma membrane-type-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1542 bits (3993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 740/1042 (71%), Positives = 881/1042 (84%), Gaps = 8/1042 (0%)
Query: 1 MENYLKKNFDVDPKRPSEEALMRWRSAVRVVKNPRRRFRMVADLAKRAEAERKRKKLQEK 60
ME L K+F++ K PS EAL RWRSAV +VKN RRRFRMVADL KR +AE+ ++ ++EK
Sbjct: 1 MEKTLLKDFELQHKNPSVEALRRWRSAVTLVKNHRRRFRMVADLDKRVQAEQIKQGIKEK 60
Query: 61 LRVALYVQKAALHFIDAGSRPIEYKLSQETLLAGYGIEPDELESIVRSHNSKAVESRGGV 120
+R+ALYVQKAAL FIDAG+R +EYKLS E +G+GI PDE+ SIVR H++K + GGV
Sbjct: 61 IRIALYVQKAALQFIDAGNR-VEYKLSSEARDSGFGIHPDEIASIVRGHDNKTLNDIGGV 119
Query: 121 EGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICA 180
E +AR++ VS+ GV+ E +++RQ +YGFNRY EKP+RSF MFVW+AL DLTLIILM+CA
Sbjct: 120 ESIARKLLVSVDGGVSEESINSRQQIYGFNRYTEKPSRSFLMFVWDALQDLTLIILMVCA 179
Query: 181 AVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVT 240
VSI +GI TEGWP G YDG+GI+LSI LVV+VTAVSDYKQSLQF+ LDKEKK + VQV
Sbjct: 180 VVSIVIGIATEGWPKGTYDGVGIILSIFLVVVVTAVSDYKQSLQFRDLDKEKKKIFVQVN 239
Query: 241 RDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDRP 300
RDG R+K+SIYD+VVGD+VHLS GDQVPADGI +SGYSL IDESSLSGE+EPV+I ++P
Sbjct: 240 RDGKRQKISIYDIVVGDVVHLSTGDQVPADGIFLSGYSLLIDESSLSGESEPVNITEEKP 299
Query: 301 FLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLV 360
FLLSGTKVQDG GKMLVT+VGMRTEWG+LM TL+EGGEDETPLQVKLNGVAT+IGKIGL
Sbjct: 300 FLLSGTKVQDGQGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIGLT 359
Query: 361 FAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLS 420
FA+LTF+VL +RF+VEKA H WSS DA KLL++FAIAVTI+VVAVPEGLPLAVTLS
Sbjct: 360 FAILTFVVLTVRFVVEKALHGDFASWSSDDAKKLLDFFAIAVTIIVVAVPEGLPLAVTLS 419
Query: 421 LAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSG 480
LAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTN MVVTK WIC +A IK
Sbjct: 420 LAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNKMVVTKAWICEKAMQIKGT 479
Query: 481 DNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKD-KDGRTNILGTPTERAILEFGLILGGD 539
++ LK S+ V NI LQ+IFQNT +EVVKD K+G+ ILGTPTE A+LEFG +L D
Sbjct: 480 ESANELKTCTSEGVINILLQAIFQNTSAEVVKDDKNGKDTILGTPTESALLEFGCLLSAD 539
Query: 540 --STFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADG 597
+ R E I+KVEPFNSV+K+MSVLV LPN GG R FCKGASEIIL MCDK I+ +G
Sbjct: 540 FDAYAQRREYKILKVEPFNSVRKKMSVLVGLPN-GGVRAFCKGASEIILKMCDKTIDCNG 598
Query: 598 KAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDP 657
+ V + E+ N+++VIN F+SEALRT+CLAF++I H+ SIP++ YTLIA+VGIKDP
Sbjct: 599 EVVDLPEDGANNVSDVINAFASEALRTICLAFKEINETHEPNSIPDSGYTLIALVGIKDP 658
Query: 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEM 717
VRPGV+EAV+TC+AAGIT+RMVTGDNI+TAKAIAKECG+LT+GGLAIEG DFR +P++M
Sbjct: 659 VRPGVKEAVQTCMAAGITIRMVTGDNINTAKAIAKECGLLTEGGLAIEGPDFRDLSPEQM 718
Query: 718 QELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGT 777
+++IP++QVMARS P DK+ LVT LR +F EVVAVTG+GTNDAPAL EADIGLAMGIAGT
Sbjct: 719 KDVIPRIQVMARSLPLDKHKLVTNLRKMFGEVVAVTGDGTNDAPALREADIGLAMGIAGT 778
Query: 778 EVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGS 837
EVAKENADVIIMDDNFTTIV V +WGR+VYINIQKFVQFQLTVN+VALVINF++ACITGS
Sbjct: 779 EVAKENADVIIMDDNFTTIVNVVKWGRAVYINIQKFVQFQLTVNVVALVINFISACITGS 838
Query: 838 APLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQ 897
APLTAVQLLWVN+IMDTLGALALATEPP++GL++RPP+ R +FIT MWRNIIGQSIYQ
Sbjct: 839 APLTAVQLLWVNLIMDTLGALALATEPPNDGLLKRPPVARGANFITKPMWRNIIGQSIYQ 898
Query: 898 IIVLGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSS 957
+I+LG+L F GK++L L G ++T ILNT IFNSFVFCQVFNEINSRD++KIN+FRG+F S
Sbjct: 899 LIILGILNFDGKRLLGLGGSDSTKILNTLIFNSFVFCQVFNEINSRDIDKINIFRGMFDS 958
Query: 958 WVFIAVLVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVGTC 1017
W+F+A++ AT FQV+IVE LGTFA+TVPLNW+ WL SVVIGA SMP +LKCIPV
Sbjct: 959 WIFMAIIFATAAFQVVIVEFLGTFASTVPLNWQFWLLSVVIGAFSMPIAAILKCIPV--- 1015
Query: 1018 TSAANSKHHDGYEPLPTGPDLA 1039
A+ +H DGYE LP+GP+LA
Sbjct: 1016 ERDASKQHRDGYEALPSGPELA 1037
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225441900|ref|XP_002284417.1| PREDICTED: calcium-transporting ATPase 4, plasma membrane-type isoform 1 [Vitis vinifera] gi|297739623|emb|CBI29805.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1536 bits (3976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 748/1039 (71%), Positives = 898/1039 (86%), Gaps = 6/1039 (0%)
Query: 1 MENYLKKNFDVDPKRPSEEALMRWRSAVRVVKNPRRRFRMVADLAKRAEAERKRKKLQEK 60
ME YLKK+FDV K SE AL RWRSAV +VKN RRRFR VA+L R+EAE+K+ K+QEK
Sbjct: 1 MERYLKKDFDVQSKHSSEAALRRWRSAVTIVKNRRRRFRDVANLHMRSEAEKKKLKIQEK 60
Query: 61 LRVALYVQKAALHFIDAGSRPIEYKLSQETLLAGYGIEPDELESIVRSHNSKAVESRGGV 120
+RVALYVQKAAL FIDAG R +++ LS+E AG+GI+PDEL SIVR H+ +++ GG+
Sbjct: 61 IRVALYVQKAALQFIDAGGR-VDHGLSEEAREAGFGIDPDELASIVRGHDIMGLKAHGGL 119
Query: 121 EGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICA 180
EGLAR+V VSL +GV S +++ RQN+YG NRY EKP+R+F MFVW+ALHDLTLIILMICA
Sbjct: 120 EGLARKVHVSLDEGVKSSDIAMRQNIYGLNRYTEKPSRTFLMFVWDALHDLTLIILMICA 179
Query: 181 AVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVT 240
+SIGVG+PTEGWP+G+Y G+GI++SI LVV+VTA+SDY+QSLQF+ LDKEKK + VQVT
Sbjct: 180 VISIGVGLPTEGWPEGMYSGVGILVSIFLVVLVTAISDYRQSLQFRDLDKEKKKIFVQVT 239
Query: 241 RDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDRP 300
RDGYR+K+SIYDLVVGDIVHLSIGDQVPADG+ ISGYSL IDES +SGE+EPVHI+ ++P
Sbjct: 240 RDGYRQKISIYDLVVGDIVHLSIGDQVPADGVFISGYSLLIDESGMSGESEPVHISEEKP 299
Query: 301 FLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLV 360
F LSGTKV DGSGKMLVT+VGMRTEWG+LM TL+EGG+DETPLQVKLNGVAT+IGKIGL
Sbjct: 300 FFLSGTKVTDGSGKMLVTTVGMRTEWGKLMETLTEGGDDETPLQVKLNGVATIIGKIGLA 359
Query: 361 FAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLS 420
FAVLTF+VL +RFLVEKA + WSS DA+ LLNYFAIAVTI+VVAVPEGLPLAVTLS
Sbjct: 360 FAVLTFVVLVVRFLVEKALRKEFTDWSSSDALTLLNYFAIAVTIIVVAVPEGLPLAVTLS 419
Query: 421 LAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSG 480
LAFAMKKLM +KALVRHLSACETMGSASCICTDKTGTLTTNHMVV K+WIC +A+ IK
Sbjct: 420 LAFAMKKLMKEKALVRHLSACETMGSASCICTDKTGTLTTNHMVVHKIWICGKAEEIKGS 479
Query: 481 DNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDS 540
++ +LK +S V +I LQ+IFQNT SEVVKDKDG+ ILGTPTE A+LEFGL+LGG+
Sbjct: 480 ESADVLKSEISGRVSSILLQAIFQNTSSEVVKDKDGKNTILGTPTESALLEFGLLLGGNF 539
Query: 541 TFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAV 600
R+E+ IV+VEPFNSVKK+MSVLV+LP +G R FCKGASEIIL+MC+KI+N DG+++
Sbjct: 540 DAQRKENKIVEVEPFNSVKKKMSVLVALP-DGRIRAFCKGASEIILSMCNKIVNYDGESI 598
Query: 601 PISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRP 660
P+SE Q +N+T++INGF+SEALRTLCLAF+D+ IP YTLI VVGIKDP RP
Sbjct: 599 PLSEVQERNITDIINGFASEALRTLCLAFKDVDDPSNENDIPTYGYTLIMVVGIKDPTRP 658
Query: 661 GVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQEL 720
GV++AV+TCLAAGI VRMVTGDNI+TAKAIAKECGILT+ GLAIEG +F S + +EM+E+
Sbjct: 659 GVKDAVQTCLAAGIAVRMVTGDNINTAKAIAKECGILTEDGLAIEGPEFHSMSLEEMREI 718
Query: 721 IPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVA 780
IP++QVMARS P+DK+ LVT LR ++ EVVAVTG+GTNDAPALHEADIGLAMGIAGTEVA
Sbjct: 719 IPRIQVMARSLPSDKHTLVTHLRKLYGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVA 778
Query: 781 KENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPL 840
KENADVIIMDDNF TIV VA+WGR+VYINIQKFVQFQLTVN+VALV+NFV+ACITGSAP
Sbjct: 779 KENADVIIMDDNFATIVNVAKWGRAVYINIQKFVQFQLTVNVVALVVNFVSACITGSAPF 838
Query: 841 TAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIV 900
TAVQLLWVN+IMDTLGALALATEPP++ LM+RPP+GR+V FIT TMWRNIIGQSIYQ+IV
Sbjct: 839 TAVQLLWVNLIMDTLGALALATEPPNDALMKRPPVGRSVSFITKTMWRNIIGQSIYQLIV 898
Query: 901 LGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVF 960
+GV++ GK++L+LSG +A+ I++TFIFN+FVFCQ+FNEINSRD+EKIN+FRG+F SW+F
Sbjct: 899 IGVISVYGKRLLRLSGSDASDIIDTFIFNTFVFCQLFNEINSRDIEKINIFRGMFDSWIF 958
Query: 961 IAVLVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVGTCTSA 1020
I V+V TV FQ+IIVELLGTFA+TVP +W+LW+ S++IGA+ MP V+LKCIPV T
Sbjct: 959 IIVMVCTVAFQIIIVELLGTFASTVPQSWQLWILSILIGAVGMPVAVVLKCIPVET---- 1014
Query: 1021 ANSKHHDGYEPLPTGPDLA 1039
+ K HD YE LP+GP+ A
Sbjct: 1015 GSFKQHDDYEALPSGPEQA 1033
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q2QY12 | ACA4_ORYSJ | 3, ., 6, ., 3, ., 8 | 0.6737 | 0.9932 | 0.9932 | yes | no |
| Q2RAS0 | ACA5_ORYSJ | 3, ., 6, ., 3, ., 8 | 0.6621 | 0.9720 | 0.9931 | yes | no |
| Q9M2L4 | ACA11_ARATH | 3, ., 6, ., 3, ., 8 | 0.7017 | 0.9826 | 0.9960 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| fgenesh4_pg.C_scaffold_220000011 | autoinhibited calcium ATPase (1038 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1039 | |||
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 0.0 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 1e-147 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-126 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-115 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 2e-98 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 8e-86 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 2e-73 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 3e-72 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 6e-59 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 3e-57 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 2e-48 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 1e-45 | |
| pfam00689 | 175 | pfam00689, Cation_ATPase_C, Cation transporting AT | 2e-44 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 2e-31 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 6e-29 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 1e-28 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 1e-24 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 2e-24 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 2e-23 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 3e-23 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 4e-23 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 1e-21 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 5e-21 | |
| pfam12515 | 47 | pfam12515, CaATP_NAI, Ca2+-ATPase N terminal autoi | 1e-20 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 2e-20 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 2e-20 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 1e-18 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 2e-18 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 4e-18 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 1e-15 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 1e-13 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 1e-13 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 1e-09 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 2e-08 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 3e-08 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 5e-08 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 5e-06 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 6e-05 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 5e-04 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.003 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 1222 bits (3163), Expect = 0.0
Identities = 478/971 (49%), Positives = 654/971 (67%), Gaps = 42/971 (4%)
Query: 58 QEKLRVALYVQKAALHFIDAGSRPIEYKLSQETLLAGYGIEPDELESIVRSHNSKAVESR 117
E +R ++ D G L+ + E
Sbjct: 1 MESVRRRTSIRDNFTDGFDVGVSI-LTDLTD-----------------IFKRAMPLYEKL 42
Query: 118 GGVEGLAREVSVSLPDGV--ASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLII 175
GG EG+A ++ L +GV +S + R+ VYG N EKP +SF VW AL D TLI+
Sbjct: 43 GGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLIL 102
Query: 176 LMICAAVSIGVGIP-----TEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDK 230
L + A VS+ +G+P G +G+ I++S++LVV+VTAV+DYK+ LQF+ L++
Sbjct: 103 LSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNR 162
Query: 231 EKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGET 290
EK + V R G +++SI+D+VVGDIV LS GD VPADG+ ISG SL IDESS++GE+
Sbjct: 163 EKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGES 222
Query: 291 EPVHINRDR-PFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNG 349
+P+ + PFLLSGT V +GSG+MLVT+VG+ + G+LM+ L + GED TPLQ KL+
Sbjct: 223 DPIKKGPVQDPFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQAGEDSTPLQEKLSE 282
Query: 350 VATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAV 409
+A +IGK G+ AVL FLVL+LR++ + + DA L++F IAVTIVVVAV
Sbjct: 283 LAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGD--GRDTEEDAQTFLDHFIIAVTIVVVAV 340
Query: 410 PEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLW 469
PEGLPLAVT++LA++MKK+M D LVRHL+ACETMGSA+ IC+DKTGTLT N M V + +
Sbjct: 341 PEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGY 400
Query: 470 ICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAI 529
I + ++ + +V V NI ++ I N+ SE V D+ G+ +G+ TE A+
Sbjct: 401 IGEQRFNVRD------VLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECAL 454
Query: 530 LEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMC 589
L+FGL+L D R E +VK+ PFNS +K MSV+V G +R F KGASEI+L C
Sbjct: 455 LDFGLLLLRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSG-GKYREFRKGASEIVLKPC 513
Query: 590 DKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAE-SIPENNYTL 648
K ++++G+A PIS++ + +VI +S+ALRT+CLA++D P TL
Sbjct: 514 RKRLDSNGEATPISDDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNKGLTL 573
Query: 649 IAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTD 708
I VVGIKDP+RPGVREAV+ C AGITVRMVTGDNI TAKAIA+ CGILT GGLA+EG +
Sbjct: 574 IGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKE 633
Query: 709 FRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADI 768
FRS +EM ++PKL+V+ARSSP DK +LV L+++ EVVAVTG+GTNDAPAL AD+
Sbjct: 634 FRSLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDM-GEVVAVTGDGTNDAPALKLADV 692
Query: 769 GLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVIN 828
G +MGI+GTEVAKE +D+I++DDNF +IV +WGR+VY NI+KF+QFQLTVN+VA+++
Sbjct: 693 GFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILT 752
Query: 829 FVAACITGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWR 888
FV +CI+ ++PLTAVQLLWVN+IMDTL ALALATEPP E L+ R PIGRN I+ +MW+
Sbjct: 753 FVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWK 812
Query: 889 NIIGQSIYQIIVLGVLTFCGKKILKLSGPNA-----TLILNTFIFNSFVFCQVFNEINSR 943
NI+GQ+ YQ++V +L F G I +SGP+ LNT +FN+FV Q+FNEIN+R
Sbjct: 813 NILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINAR 872
Query: 944 DMEKINVFRGIFSSWVFIAVLVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISM 1003
+ + NVF G+F + +F+ ++ T GFQVIIVE G+F +TV L+ + W+ V++G +S+
Sbjct: 873 KLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEFGGSFFSTVSLSIEQWIGCVLLGMLSL 932
Query: 1004 PFGVLLKCIPV 1014
FGVLL+ IPV
Sbjct: 933 IFGVLLRLIPV 943
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 631 bits (1630), Expect = 0.0
Identities = 306/918 (33%), Positives = 452/918 (49%), Gaps = 73/918 (7%)
Query: 126 EVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIG 185
E+ S G++ EEV R YG N E+ RS D +I+L++ A +S
Sbjct: 36 ELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAF 95
Query: 186 VGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYR 245
VG W D D + I+L +++ ++ V +Y+ +AL K+ + +V RDG
Sbjct: 96 VGD----WVDAGVDAIVILLVVVINALLGFVQEYRAEKALEAL-KKMSSPKAKVLRDGKF 150
Query: 246 KKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVH----------- 294
++ +LV GDIV L GD VPAD L+ L +DES+L+GE+ PV
Sbjct: 151 VEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDA 210
Query: 295 -INRDRP-FLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVAT 352
+ DR L SGT V G K +V + G TE+G++ L E +TPLQ KLN +
Sbjct: 211 PLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGK 270
Query: 353 VIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEG 412
+ + LV L F+V R LL F A+ + V AVPEG
Sbjct: 271 FLLVLALVLGALVFVVGLFRGGN-----------------GLLESFLTALALAVAAVPEG 313
Query: 413 LPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICN 472
LP VT++LA +++ D A+VR L+A ET+GS IC+DKTGTLT N M V K++I
Sbjct: 314 LPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYING 373
Query: 473 EAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEF 532
K I D S A+ L + N+ + G PTE A++EF
Sbjct: 374 GGKDIDDKDL------KDSPALLRFLLAAALCNSVTPEKNGWY----QAGDPTEGALVEF 423
Query: 533 GLILGGDSTFHREESA--IVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCD 590
LG E I+ PF+S +KRMSV+V G + +F KGA E+IL C
Sbjct: 424 AEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDE-GKYILFVKGAPEVILERCK 482
Query: 591 KIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAES--IPENNYTL 648
I G+ P++EE + L + +SE LR L +A++ + K + E++
Sbjct: 483 SI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVF 538
Query: 649 IAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG--GLAIEG 706
+ + GI+DP R V+EA+E AGI V M+TGD++ TA AIAKECGI + L I+G
Sbjct: 539 LGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDG 598
Query: 707 TDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEA 766
+ + + +E+ EL+ +L V AR SP K +V L+ VVA+TG+G NDAPAL A
Sbjct: 599 AELDALSDEELAELVEELSVFARVSPEQKARIVEALQKS-GHVVAMTGDGVNDAPALKAA 657
Query: 767 DIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALV 826
D+G+AMG GT+ AKE AD++++DDNF TIV GR VY+NI+KF+ + L+ N+ ++
Sbjct: 658 DVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVL 717
Query: 827 INFVAACI-TGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVT 885
+ + PLT +QLLW+N++ D+L ALAL E P +M+RPP G
Sbjct: 718 TLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRK 777
Query: 886 MWRNIIGQSIYQIIVLGVLTFCGKKILKLSGPNATLILN-------TFIFNSFVFCQVFN 938
++ I +L +LTF + L TL L+ T F V Q+
Sbjct: 778 IFWRFILIIGLLSAILFILTFL---LYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLL 834
Query: 939 EINSRDMEKINVFR-GIFSSWVFIAVLVATVGFQVIIVELLGTFA---TTVPLNWKLWLA 994
+ R +FS+ L+ + Q++I+ L PL+ WL
Sbjct: 835 TLAVRSR-GRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLSLFEWLI 893
Query: 995 SVVIGAISMPFGVLLKCI 1012
++ + + + V
Sbjct: 894 AIAVALLLLYIVVSELYK 911
|
Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 461 bits (1188), Expect = e-147
Identities = 284/876 (32%), Positives = 460/876 (52%), Gaps = 97/876 (11%)
Query: 136 ASEEVSNRQNVYGFNRYAEKPARSFWM-FVWEALHDLTLIILMICAAVSIGVGIPTEGWP 194
+S+E S+R+ +G+N + + S W F+ + + + +++L+ A +S+ +G
Sbjct: 26 SSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG------- 78
Query: 195 DGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLI---VQVTRDGYRKKLSIY 251
+ D + I L+IL+VV V V +Y+ +AL+K L+ + R+G + +
Sbjct: 79 -NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNK----LVPPECHLIREGKLEHVLAS 133
Query: 252 DLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVH-----INRDRPFLLS-- 304
LV GD+V LS+GD+VPAD ++ L+IDES+L+GET PV I L+
Sbjct: 134 TLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAER 193
Query: 305 ------GTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIG 358
GT V+ G GK +V G TE+G + + + +TPLQ ++ +G
Sbjct: 194 SNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQKSMD-------LLG 246
Query: 359 LVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVT 418
++++F V+ + LV Q K W L F I+V++ V A+PEGLP+ VT
Sbjct: 247 KQLSLVSFGVIGVICLVGWFQG---KDW--------LEMFTISVSLAVAAIPEGLPIIVT 295
Query: 419 LSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNE----- 473
++LA + ++ +A+VR L + ET+GS + IC+DKTGTLT NHM VTK+W +
Sbjct: 296 VTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTML 355
Query: 474 --------AKTIKSGDNEK-LLKPSVSDAVF--NIFLQSIFQNTGSEVVKDKDGRTNILG 522
+ I GD +VS + N+ + F+N +LG
Sbjct: 356 NAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEAD----------TLLG 405
Query: 523 TPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGAS 582
PT+ A++E + G D RE V PF+S +K M+V + F KGA
Sbjct: 406 NPTDVALIELLMKFGLDDL--RETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAY 463
Query: 583 EIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIP 642
E +L C DGK + ++++QR + +S LR + A K
Sbjct: 464 EQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEK--------- 514
Query: 643 ENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGL 702
T + +VGI DP RPGV+EAV T + G+ + M+TGD+ TA +IA+ G+ +
Sbjct: 515 -GQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQ 573
Query: 703 AIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPA 762
++ G + + Q++ +++PK+ V AR+SP K +V L+ +VVA+TG+G NDAPA
Sbjct: 574 SVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKR-GDVVAMTGDGVNDAPA 632
Query: 763 LHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNI 822
L ADIG+AMG GT+VAKE AD+I+ DD+F TI++ G+ ++ NI+ F+ FQL+ ++
Sbjct: 633 LKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSV 692
Query: 823 VALVINFVAACITGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFI 882
AL + +A + PL A+Q+LW+N++MD A +L EP + +M++PP RN +
Sbjct: 693 AALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKIL 752
Query: 883 TVTMWRNIIGQSIYQIIVLG-VLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEIN 941
T + + I+ +I IIV+G + F + ++ T T F FVF +FN +
Sbjct: 753 TKDLIKKILVSAI--IIVVGTLFVF----VREMQDGVITARDTTMTFTCFVFFDMFNALA 806
Query: 942 SRDMEKINVFR-GIFSSWVF-IAVLVATVGFQVIIV 975
R K +VF G FS+ +F AV + +G Q++++
Sbjct: 807 CRSQTK-SVFEIGFFSNRMFNYAVGGSIIG-QLLVI 840
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 405 bits (1043), Expect = e-126
Identities = 260/793 (32%), Positives = 391/793 (49%), Gaps = 95/793 (11%)
Query: 164 VWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSL 223
V E DL + IL++ A VS + EG ILL+++ A+ Q
Sbjct: 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEE--TVTAFVEPFVILLILVANAIVGVWQER 58
Query: 224 QF-KALD--KEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLT 280
KA++ KE ++ +V RDG + DLV GDIV L++GD+VPAD ++S +L
Sbjct: 59 NAEKAIEALKEYESEHAKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLR 118
Query: 281 IDESSLSGE-------TEPVHINRDR-----PFLLSGTKVQDGSGKMLVTSVGMRTEWGR 328
+D+S L+GE TE V R L SGT V G + +V GM TE G+
Sbjct: 119 VDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGK 178
Query: 329 LMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSS 388
+ + +++TPLQ KL+ ++ K+ + +L +++ F
Sbjct: 179 IRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFN---DPALG---GGW 232
Query: 389 IDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSAS 448
I + YF IAV + V A+PEGLP +T LA +K+ A+VR L + ET+G +
Sbjct: 233 I--QGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTT 290
Query: 449 CICTDKTGTLTTNHMVVTKLWICNEA------------------------KTIKSGDNEK 484
IC+DKTGTLTTN M V K+ + + + G +
Sbjct: 291 VICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAG 350
Query: 485 LLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHR 544
L + + A+ N S+ N V + +G TE A+ +G +T +
Sbjct: 351 LEELATIAALCND--SSLDFNERKGVYEK-------VGEATEAALKVLVEKMGLPATKNG 401
Query: 545 EESAIVKVEPFNSVK----------------KRMSVLVSLPNNGGFRVFCKGASEIILNM 588
S NSV K MSVL + G ++F KGA E +L
Sbjct: 402 VSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCK--PSTGNKLFVKGAPEGVLER 459
Query: 589 CDKIINADGKAVPISEEQRKNLTNVINGFSS-EALRTLCLAFQDIKGNHKAESIP----- 642
C I+N DG+AVP++++ + + +VI + +ALR L LAF+DI + + E +
Sbjct: 460 CTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDI-PDPREEDLLSDPAN 518
Query: 643 ----ENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILT 698
E++ T I VVG+ DP RP V +A+E C AGI V M+TGDN TA+AI + GI +
Sbjct: 519 FEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFS 578
Query: 699 DG----GLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTG 754
+ G +F P + + + +R P+ K LV L+ E+VA+TG
Sbjct: 579 PDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQE-QGEIVAMTG 637
Query: 755 NGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFV 814
+G NDAPAL +ADIG+AMG +GTEVAKE +D+++ DDNF TIV GR++Y N+++F+
Sbjct: 638 DGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFI 696
Query: 815 QFQLTVNIVALVINFVAACITGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPP 874
++ ++ NI +V F+ A + L VQLLWVN++ D L A AL PP + +M +PP
Sbjct: 697 RYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPP 756
Query: 875 IGRNVHFITVTMW 887
R +T W
Sbjct: 757 --RRPDEPLITGW 767
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 364 bits (937), Expect = e-115
Identities = 202/671 (30%), Positives = 307/671 (45%), Gaps = 146/671 (21%)
Query: 203 IVLSILLVVIVT-AVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHL 261
+++ +LLVV D +SL D+ V R+G+ K++ DLV GD+V +
Sbjct: 6 VLVFVLLVVKQKLKAEDILRSLS----DRLVNTRPATVLRNGW-KEIPAKDLVPGDVVLV 60
Query: 262 SIGDQVPADGILISGYSLTIDESSLSGETEPVH-----------INRDRPFLLSGTKVQD 310
G+ VPADG+L+SG S +DES+L+GE+ PV I D F +GT V
Sbjct: 61 KSGETVPADGVLLSG-SCFVDESNLTGESNPVLKTALKETQSGTITGDLVF--AGTYVFG 117
Query: 311 GSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIG-KIGLVFAVLTFLVL 369
G+ ++VT G+ T GR+ V + G E TPLQ K + + I L+ A+ FL L
Sbjct: 118 GTLIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENFIFILFLLLLALAVFLYL 177
Query: 370 ALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLM 429
+R D + A+ ++V+ VP LP AVT++LA +L
Sbjct: 178 FIRGW---------------DPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLA 222
Query: 430 NDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPS 489
LVR+L+A E +G +C+DKTGTLT N M + ++I
Sbjct: 223 KKGILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDG----------------- 265
Query: 490 VSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAI 549
+ S + D + G P E+A+L+ L G + +E I
Sbjct: 266 -------------GKEDNSSSLVACDN-NYLSGDPMEKALLKS-AELVGKADKGNKEYKI 310
Query: 550 VKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKN 609
+ V PF+SV KRMSV+V +G +F KGA E IL C N
Sbjct: 311 LDVFPFSSVLKRMSVIVE-TPDGSDLLFVKGAPEFILERC------------------NN 351
Query: 610 LTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETC 669
+ + LR L A +++ E++ + ++ +DP+RP +E +E
Sbjct: 352 YEEKYLELARQGLRVLAFASKEL----------EDDLEFLGLITFEDPLRPDAKETIEEL 401
Query: 670 LAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMAR 729
AAGI V M+TGDN+ TAKAIAKE GI V AR
Sbjct: 402 KAAGIKVVMITGDNVLTAKAIAKELGID----------------------------VFAR 433
Query: 730 SSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIM 789
SP K +V L+ +VA+TG+G NDAPAL +AD+G+AMG AK AD++++
Sbjct: 434 VSPEQKLQIVEALQK-KGHIVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLL 486
Query: 790 DDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAVQLLWVN 849
DD+ + IV + GR ++ NI+ + + + N++ + + + I
Sbjct: 487 DDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIVI--------------I 532
Query: 850 MIMDTLGALAL 860
+++ L ALAL
Sbjct: 533 LLLPMLAALAL 543
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 333 bits (855), Expect = 2e-98
Identities = 255/850 (30%), Positives = 404/850 (47%), Gaps = 109/850 (12%)
Query: 86 LSQETLLAGYGIEPDELESIVRSHNSKAVESRGGVEGLAREVSVSL-PDGVASEEVSNRQ 144
L +E + + + DELE + SK + + E LAR+ +L P E V
Sbjct: 9 LKKEVEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWV---- 64
Query: 145 NVYGFNRYAEKPARSFWMFVWEALHDLTLIILMIC-AAVSIGVGIPTEGWPDGVYDGLGI 203
++ + F M +W I ++C A I E D +Y LG+
Sbjct: 65 ------KFCRQLFGGFSMLLW--------IGAILCFLAYGIQASTEEEPQNDNLY--LGV 108
Query: 204 VLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQ---VTRDGYRKKLSIYDLVVGDIVH 260
VLS VVI+T Y Q + + + KN++ Q V RDG + ++ +VVGD+V
Sbjct: 109 VLS--AVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVE 166
Query: 261 LSIGDQVPADGILISGYSLTIDESSLSGETEP-------VHIN--RDRPFLLSGTKVQDG 311
+ GD++PAD +IS +D SSL+GE+EP H N R T +G
Sbjct: 167 VKGGDRIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEG 226
Query: 312 SGKMLVTSVGMRTEWGRLMVTLSEGGEDE-TPLQVKLNGVATVIGKIGLVFAVLTFLVLA 370
+ + +V + G RT GR+ +L+ G E+ TP+ +++ +I + + V +F +L+
Sbjct: 227 TARGIVVNTGDRTVMGRI-ASLASGLENGKTPIAIEIEHFIHIITGVAVFLGV-SFFILS 284
Query: 371 LRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMN 430
L I ++ ++A+ L + I+V VPEGL VT+ L K++
Sbjct: 285 L-----------ILGYTWLEAVIFL------IGIIVANVPEGLLATVTVCLTLTAKRMAR 327
Query: 431 DKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICN---EAKTIKSGDNEKLLK 487
LV++L A ET+GS S IC+DKTGTLT N M V +W N EA T + K
Sbjct: 328 KNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDK 387
Query: 488 PSVS----DAVFNIFLQSIFQNTGSEV-VKDKDGRTNILGTPTERAILEFGLILGGDSTF 542
S + + + +++F+ V + + + G +E A+L+ + G
Sbjct: 388 SSATWLALSRIAGLCNRAVFKAGQENVPILKRA----VAGDASESALLKCIELCLGSVME 443
Query: 543 HREESAIVKVEPFNSVKKRMSVLVSLPNNGGFR--VFCKGASEIILNMCDKIINADGKAV 600
RE + V PFNS K + + R + KGA E IL C I+ GK
Sbjct: 444 MRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSIL-IHGKEQ 502
Query: 601 PISEEQRKNLTNV---INGFSSEALRTLCLAFQD------IKGNHKAESIPENNYTLIAV 651
P+ EE ++ N + G L L D + + + P +N + +
Sbjct: 503 PLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGL 562
Query: 652 VGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIE------ 705
+ + DP R V +AV C +AGI V MVTGD+ TAKAIAK GI+++G +E
Sbjct: 563 ISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARL 622
Query: 706 ------------------GTDFRSKNPQEMQELIPKLQ--VMARSSPTDKYILVTQLRNV 745
G+D + +++ E++ V AR+SP K I+V +
Sbjct: 623 NIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ 682
Query: 746 FKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRS 805
+VAVTG+G ND+PAL +ADIG+AMGIAG++V+K+ AD+I++DDNF +IVT GR
Sbjct: 683 -GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRL 741
Query: 806 VYINIQKFVQFQLTVNIVALVINFVAACITG-SAPLTAVQLLWVNMIMDTLGALALATEP 864
++ N++K + + LT NI + F+ I PL + +L +++ D + A++LA E
Sbjct: 742 IFDNLKKSIAYTLTSNIPEIT-PFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEK 800
Query: 865 PHEGLMQRPP 874
+M+R P
Sbjct: 801 AESDIMKRQP 810
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 299 bits (766), Expect = 8e-86
Identities = 229/910 (25%), Positives = 376/910 (41%), Gaps = 158/910 (17%)
Query: 127 VSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGV 186
+ S+P+G+ +E +R G NR + + + ++L+I AA+S
Sbjct: 19 IGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFA- 77
Query: 187 GIPTEGWPDGVYDGLGIVLSILLV-VIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYR 245
W +G G++ +I+ + +++ + +YK +L K + + V R+G
Sbjct: 78 ---MHDWIEG-----GVISAIIALNILIGFIQEYKAEKTMDSL-KNLASPMAHVIRNGKS 128
Query: 246 KKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPV--------HINR 297
+ +DLV GDI L GD +PAD LI + DE+ L+GE+ PV
Sbjct: 129 DAIDSHDLVPGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEE 188
Query: 298 DRP------FLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGG-------EDETPLQ 344
D P S + V G K + + + +E G + L G +D+ +
Sbjct: 189 DTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKR 248
Query: 345 VKLN-----------------GVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWS 387
KLN V T + + AV+ F + + ++ A H
Sbjct: 249 RKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAH------- 301
Query: 388 SIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSA 447
D K + +AI + I ++ PE L +++++A + +VR L A E +G+
Sbjct: 302 KFDVDKEVAIYAICLAISII--PESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAV 359
Query: 448 SCICTDKTGTLTTNHMVVTKLWI----------CNEAKTIKSGDNEKLLKPSVSDAVFN- 496
+ IC+DKTGT+T M+ ++WI ++A G+ + + S + N
Sbjct: 360 NDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNE 419
Query: 497 IFLQSIFQNTGSEVVKDKDGRTNI-------------------------------LGTPT 525
Q I + E+ K+ D +I G PT
Sbjct: 420 AADQDILKEFKDEL-KEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDPT 478
Query: 526 ERAI--------LEFGLILGGDSTF------------HREESAIVKVE-----PFNSVKK 560
E AI L + G + H E+ + E PF+S K
Sbjct: 479 EIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIK 538
Query: 561 RMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADG-KAVPISEEQRKNLTNVINGFSS 619
RM+ + + + ++ KGA E I+ C DG K P+ + R+ + + ++
Sbjct: 539 RMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAA 598
Query: 620 EALRTLCLAFQDI------KGNHKAESIP----ENNYTLIAVVGIKDPVRPGVREAVETC 669
E LR L A + K E++ E++ + ++GI DP R AVE C
Sbjct: 599 EGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKC 658
Query: 670 LAAGITVRMVTGDNIHTAKAIAKECGILTDG----------GLAIEGTDFRSKNPQEMQE 719
AGI V M+TGD TAKAIA+E GI+ + + G+ F + + +E+ +
Sbjct: 659 HQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDD 718
Query: 720 LIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEV 779
L V+AR +P K ++ L K A+TG+G ND+P+L A++G+AMGI G++V
Sbjct: 719 LKALCLVIARCAPQTKVKMIEALHRR-KAFCAMTGDGVNDSPSLKMANVGIAMGINGSDV 777
Query: 780 AKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACI----- 834
AK+ +D+++ DDNF +I+ GR ++ NI KFV L VA I +
Sbjct: 778 AKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFV-LHLLAENVAEAILLIIGLAFRDEN 836
Query: 835 -TGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQ 893
PL+ V++LW MI A+ L E LM R P V II
Sbjct: 837 GKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQ---KELIIDM 893
Query: 894 SIYQIIVLGV 903
Y + G
Sbjct: 894 FAYGFFLGGS 903
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 258 bits (660), Expect = 2e-73
Identities = 182/711 (25%), Positives = 310/711 (43%), Gaps = 102/711 (14%)
Query: 134 GVASEEVSNRQNVYGFNRYAEK---PARSFWMFVWEALHDLTLIILMICAAVSIGVGIPT 190
G+ S E R YG N EK P F F W L ++ AA I + +
Sbjct: 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLS------WVMEAAAIIAIAL-- 52
Query: 191 EGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSI 250
E W D V I+ +LL + + + K +AL K+ +V RDG +++
Sbjct: 53 ENWVDFV----IILGLLLLNATIGFIEENKAGNAVEAL-KQSLAPKARVLRDGKWQEIPA 107
Query: 251 YDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPV--HINRDRPFLLSGTKV 308
+LV GD+V L IGD VPAD L G + +D+++L+GE+ PV D + SG+ V
Sbjct: 108 SELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTG-DIAY--SGSTV 164
Query: 309 QDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLV 368
+ G + +VT+ GM T +G+ + LQ L+ KIGL VL ++
Sbjct: 165 KQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILS-------KIGLFLIVLIGVL 217
Query: 369 LALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKL 428
+ + +V + A+ ++V +P +P +++++A +L
Sbjct: 218 VLIELVVLFFGRGE----------SFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAEL 267
Query: 429 MNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKP 488
KA+V L+A E + +C+DKTGTLT N + + +
Sbjct: 268 AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDE-------------ILPFFNGF 314
Query: 489 SVSDAVFNIFLQSIFQNTGSEVVKDKDG-RTNILGTPTERAILEFGLILGGDSTFHREES 547
D + L S +D+D T +LG+ + R+
Sbjct: 315 DKDDVLLYAALAS--------REEDQDAIDTAVLGSAKDLKEA-------------RDGY 353
Query: 548 AIVKVEPFNSVKKRMSVLVSLPNNGG-FRVFCKGASEIILNMCDKIINADGKAVPISEEQ 606
+++ PF+ V KR V P G F+V KGA ++IL++CD +E
Sbjct: 354 KVLEFVPFDPVDKRTEATVEDPETGKRFKV-TKGAPQVILDLCDN-----------KKEI 401
Query: 607 RKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAV 666
+ + ++ +S R L +A D +G + + ++ + DP R +E +
Sbjct: 402 EEKVEEKVDELASRGYRALGVARTDEEG----------RWHFLGLLPLFDPPRHDTKETI 451
Query: 667 ETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLA--IEGTDFRSKNPQEMQELIPKL 724
E G+ V+MVTGD++ AK A+ G+ T+ A + D R P + E++
Sbjct: 452 ERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGLGEMVEDA 511
Query: 725 QVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAG-TEVAKEN 783
A P KY +V L+ +V +TG+G NDAPAL +AD+G+A +AG T+ A+
Sbjct: 512 DGFAEVFPEHKYEIVEILQK-RGHLVGMTGDGVNDAPALKKADVGIA--VAGATDAARSA 568
Query: 784 ADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACI 834
AD+++ + + IV R ++ ++ +V +++ I + + I
Sbjct: 569 ADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILI 619
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 257 bits (658), Expect = 3e-72
Identities = 202/823 (24%), Positives = 359/823 (43%), Gaps = 103/823 (12%)
Query: 110 NSKAVESRGGVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALH 169
N+ ES+ G E L R++ G+ + EV+ R +G N+ E+ + A +
Sbjct: 10 NNLLKESQMGKETLLRKLG-VHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFN 68
Query: 170 DLTLIILMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALD 229
+ + IL + VS T+ V L ++ S LL I + ++ + + K +
Sbjct: 69 NPFIYILAMLMGVSYL----TDDLEATVIIALMVLASGLLGFIQESRAE-RAAYALKNMV 123
Query: 230 KEKKNLI--VQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLS 287
K ++ + +G ++ I LV GD++ L+ GD +PAD +IS L I++S+L+
Sbjct: 124 KNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALT 183
Query: 288 GETEPVH-------INRDRPF-----LLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSE 335
GE+ PV GT V G + +V + G T +G L + +E
Sbjct: 184 GESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE 243
Query: 336 GGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLL 395
T + V+ ++ + LV + ++ L W L
Sbjct: 244 RRGQ-TAFDKGVKSVSKLLIRFMLVMVPVVLMINGL----------MKGDW--------L 284
Query: 396 NYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKT 455
F A+ + V PE LP+ V+ +LA + K +V+ LSA + G+ +CTDKT
Sbjct: 285 EAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKT 344
Query: 456 GTLTTNHMVVTKLWICNEAKTIKSGD-NEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDK 514
GTLT + + + E SG+ +E++LK + +L S FQ
Sbjct: 345 GTLTQDKIEL-------EKHIDSSGETSERVLKMA--------WLNSYFQT--------- 380
Query: 515 DGRTNILGTPTERAILEFGLILGGDSTFHREESA-IVKVE--PFNSVKKRMSVLVSLPNN 571
G N+L + A+L D + R+ ++ KV+ PF+ ++R+SV+V
Sbjct: 381 -GWKNVL----DHAVLAK-----LDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAE 430
Query: 572 GGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQD 631
R+ CKGA E +L +C G V +SE ++ L ++ + + +R + +A +
Sbjct: 431 VT-RLICKGAVEEMLTVCTH-KRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKT 488
Query: 632 IKGNHKAES-IPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAI 690
+K + E + +G DP + +EA+ GI V+++TGDN I
Sbjct: 489 LKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARI 548
Query: 691 AKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVV 750
+E GI D + G D + +E+ + K + AR +P K ++ L+ V
Sbjct: 549 CQEVGI--DANDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKA-GHTV 605
Query: 751 AVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINI 810
G+G NDAPAL +AD+G+++ A ++AKE +D+I+++ + + GR+ + NI
Sbjct: 606 GFLGDGINDAPALRKADVGISVDTA-ADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNI 664
Query: 811 QKFVQFQLTVNIVALVINFVAACITGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLM 870
K+++ + N + VA+ P+ ++ LL N++ D L L + +
Sbjct: 665 LKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFL 723
Query: 871 QRPP------IGRNVHFITVTMWRNIIGQSIYQIIVLGVLTFC 907
++P +GR + I SI+ I TF
Sbjct: 724 KKPHQWEQKGMGRFMLCIGPV-------SSIFDI-----ATFL 754
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 218 bits (558), Expect = 6e-59
Identities = 194/744 (26%), Positives = 339/744 (45%), Gaps = 84/744 (11%)
Query: 130 SLPDGVASEEVSNRQNVYGFNRY-AEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGI 188
+ P+G+ EV + + +G N A+KP +W+ +W + I+L I A+S
Sbjct: 63 THPEGLNEAEVESAREQHGENELPAQKPL-PWWVHLWVCYRNPFNILLTILGAISYA--- 118
Query: 189 PTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLI--VQVTRDGYRK 246
TE L + +S LL I A S K + KA+ ++ + +
Sbjct: 119 -TEDLFAAGVIALMVAISTLLNFIQEARST-KAADALKAMVSNTATVLRVINDKGENGWL 176
Query: 247 KLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVH-------INRDR 299
++ I LV GDI+ L+ GD +PAD ++ L + ++SL+GE+ PV
Sbjct: 177 EIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSN 236
Query: 300 PF-----LLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVI 354
P GT V G+ + +V + G T +G+L +SE + Q ++ V+ ++
Sbjct: 237 PLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQGISRVSWLL 296
Query: 355 GKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLP 414
+ LV A + L I ++ D + A+++ V PE LP
Sbjct: 297 IRFMLVMAPVVLL---------------INGYTKGDWWEA---ALFALSVAVGLTPEMLP 338
Query: 415 LAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEA 474
+ VT +LA KL K +V+ L A + G+ +CTDKTGTLT + +V+ E
Sbjct: 339 MIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVL-------EN 391
Query: 475 KTIKSGDNEKLLKPSVSDAVF-NIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFG 533
T SG S+ V + +L S +Q G N+L + A+LE
Sbjct: 392 HTDISGKT--------SERVLHSAWLNSHYQT----------GLKNLL----DTAVLE-- 427
Query: 534 LILGGDSTFHREE-SAIVKVE--PFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCD 590
G D R S K++ PF+ ++RMSV+V+ ++ CKGA E ILN+C
Sbjct: 428 ---GVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTE-HHQLICKGALEEILNVCS 483
Query: 591 KIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAES-IPENNYTLI 649
++ + G+ VP+ + + + V + + + LR + +A + + E++ L
Sbjct: 484 QVRHN-GEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILE 542
Query: 650 AVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDF 709
+ DP + A++ A+G+TV+++TGD+ A + E G+ + G+D
Sbjct: 543 GYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAGE--VLIGSDI 600
Query: 710 RSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG 769
+ + E+ L + + AR +P K +VT L+ VV G+G NDAPAL ADIG
Sbjct: 601 ETLSDDELANLAERTTLFARLTPMHKERIVTLLKRE-GHVVGFMGDGINDAPALRAADIG 659
Query: 770 LAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINF 829
+++ ++A+E AD+I+++ + + GR + N+ K+++ + N +
Sbjct: 660 ISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVL 718
Query: 830 VAACITGSAPLTAVQLLWVNMIMD 853
VA+ P+ + LL N++ D
Sbjct: 719 VASAFLPFLPMLPLHLLIQNLLYD 742
|
Length = 902 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 196 bits (501), Expect = 3e-57
Identities = 88/241 (36%), Positives = 128/241 (53%), Gaps = 20/241 (8%)
Query: 203 IVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLS 262
I+L +L+ ++ A +Y+ KAL K V RDG +++ +LVVGDIV L
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 263 IGDQVPADGILISGYSLTIDESSLSGETEPVHINRDRPFLLSGTKVQDGSGKMLVTSVGM 322
GD+VPADG +I G SL +DES+L+GE+ PV +R + +GT V G K++VT+ G
Sbjct: 62 PGDRVPADGRIIEG-SLEVDESALTGESLPVEKSRG-DTVFAGTVVLSGELKVIVTATGE 119
Query: 323 RTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQ 382
TE G++ + E +TPLQ L+ +A ++ I L A+L FL+ R
Sbjct: 120 DTELGKIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILVFLIWFFRGG-------- 171
Query: 383 IKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACE 442
L A+ ++V A PE LPLAV L+LA +L LV++LSA E
Sbjct: 172 ----------DFLEALLRALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALE 221
Query: 443 T 443
T
Sbjct: 222 T 222
|
Length = 222 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 186 bits (475), Expect = 2e-48
Identities = 193/767 (25%), Positives = 346/767 (45%), Gaps = 112/767 (14%)
Query: 133 DGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSI--GVGIPT 190
G+ E+ + R YG N A + + + +A ++ + +LM+ AA+S +P
Sbjct: 44 QGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPL 103
Query: 191 EGWPDGVYDGLGIVLS-ILLVVIVTAVSDYKQSLQFKALDKEKKNLI---------VQVT 240
+ G+ I+L+ +LL ++ +++ + +AL K ++
Sbjct: 104 RRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEAL----KAMVRTTATVLRRGHAG 159
Query: 241 RDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPV------- 293
+ R+++ + +LV GDIVHLS GD +PAD LI L I ++ L+GE PV
Sbjct: 160 AEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGEALPVEKYDTLG 219
Query: 294 HINR--------------DRPFL-LSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGE 338
+ D P + GT V G+ +V + G RT +G L ++ G
Sbjct: 220 AVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSLAKSIV-GTR 278
Query: 339 DETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIK-HWSSIDAMKLLNY 397
+T +N V+ ++ + LV + L+ K W +A+
Sbjct: 279 AQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGF-----------TKGDWL--EAL----L 321
Query: 398 FAIAVTIVVVAVPEGLPLAVTLSLA---FAMKKLMNDKALVRHLSACETMGSASCICTDK 454
FA+AV V PE LP+ V+ +LA AM + K +V+ L+A + G+ +CTDK
Sbjct: 322 FALAVA--VGLTPEMLPMIVSSNLAKGAIAMAR---RKVVVKRLNAIQNFGAMDVLCTDK 376
Query: 455 TGTLTTNHMVVTKLWICNEAKTIKSG-DNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKD 513
TGTLT + +++ E SG +E++L+ A N F QS
Sbjct: 377 TGTLTQDRIIL-------EHHLDVSGRKDERVLQL----AWLNSFHQS------------ 413
Query: 514 KDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVE--PFNSVKKRMSVLVSLPNN 571
G N++ ++A++ F KV+ PF+ V++R+SV+V
Sbjct: 414 --GMKNLM----DQAVVAFAEGNPEIVKPAGYR----KVDELPFDFVRRRLSVVVE-DAQ 462
Query: 572 GGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQD 631
G + CKGA E +L + + + P+ E +R+ L + ++++ R L +A ++
Sbjct: 463 GQHLLICKGAVEEMLAVATHVRD-GDTVRPLDEARRERLLALAEAYNADGFRVLLVATRE 521
Query: 632 IKGNHKAESIP---ENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDN-IHTA 687
I G E + + + DP + A+ G+ V+++TGDN I TA
Sbjct: 522 IPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTA 581
Query: 688 KAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFK 747
K I +E G+ + G + GT+ + + + + + V A+ +P K ++ L+
Sbjct: 582 K-ICREVGL--EPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQAN-G 637
Query: 748 EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVY 807
V G+G NDAPAL +AD+G+++ +G ++AKE+AD+I+++ + + GR +
Sbjct: 638 HTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKGRETF 696
Query: 808 INIQKFVQFQLTVNIVALVINFVAACITGSAPLTAVQLLWVNMIMDT 854
NI K++ + N + VA+ P+ A+ LL N++ D
Sbjct: 697 GNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI 743
|
Length = 903 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 178 bits (454), Expect = 1e-45
Identities = 186/878 (21%), Positives = 331/878 (37%), Gaps = 179/878 (20%)
Query: 139 EVSNRQNVYGFNRYAEKPARSF-WMFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGV 197
+++ R+ YG N E P SF + E LH + S+ + + E +
Sbjct: 144 DIAQRKAKYGKNE-IEIPVPSFLELLKEEVLHPFYVF-----QVFSVILWLLDEYY---- 193
Query: 198 YDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGD 257
Y L IV + I +V ++ +Q + D K V V R+G ++ +LV GD
Sbjct: 194 YYSLCIVF-MSSTSISLSVYQIRKQMQ-RLRDMVHKPQSVIVIRNGKWVTIASDELVPGD 251
Query: 258 IVHLSIGDQ----VPADGILISGYSLTIDESSLSGETEPV----------------HINR 297
IV SI +P D +L+SG S ++ES L+GE+ PV
Sbjct: 252 IV--SIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYET 308
Query: 298 DRP-FLLSGTKV-------QDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNG 349
+ L GTK+ D +V G T G+L+ ++ P K
Sbjct: 309 SKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYP----KPRVFKFYK 364
Query: 350 VATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAV 409
+ V A++ F+ + + + +I ++ I+ + V
Sbjct: 365 DSFKFILFLAVLALIGFIYTIIELIKDGRPLGKI--------------ILRSLDIITIVV 410
Query: 410 PEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLW 469
P LP +++ + ++ +L G C DKTGTLT + + + +
Sbjct: 411 PPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQ 470
Query: 470 ICNEAKTIKSGDNEKLLKPSVSDAVFNI--FLQSIFQNTGSEVVKDKDGRTNILGTPTER 527
N++ LK D+ +++ T + K + ++G P ++
Sbjct: 471 G--------LSGNQEFLKIVTEDSSLKPSITHKAL--ATCHSLTKLEG---KLVGDPLDK 517
Query: 528 AILEF-GLIL--GGDSTFHREESA------------IVKVEPFNSVKKRMSVLVSLPNNG 572
+ E G L +S A I++ F+S +RMSV+VS +
Sbjct: 518 KMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDER 577
Query: 573 GFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDI 632
F KGA E I ++C + VP ++ V+ ++ E R L LA++++
Sbjct: 578 SPDAFVKGAPETIQSLCSP------ETVPSDYQE------VLKSYTREGYRVLALAYKEL 625
Query: 633 ------KGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHT 686
K + E+N T + + ++P++P +E ++ A I M+TGDN T
Sbjct: 626 PKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685
Query: 687 AKAIAKECG--------------------------------------------------- 695
A +A+ECG
Sbjct: 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVE 745
Query: 696 --ILTDGGLAIEGTDFR---SKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVV 750
+ + LA+ G F + +P+ + L+ V AR +P K LV L+ + V
Sbjct: 746 DLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKL-DYTV 804
Query: 751 AVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYIN- 809
+ G+G ND AL +AD+G+++ A VA A + + + V R GR +
Sbjct: 805 GMCGDGANDCGALKQADVGISLSEAEASVA---APFTSKLASISCVPNVIREGRCALVTS 861
Query: 810 IQKFVQFQLTVNIVALVINFVAACITGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGL 869
Q F L I ++ + + L Q L +++++ AL ++ P + L
Sbjct: 862 FQMFKYMALYSLIQFYSVSILY---LIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKL 918
Query: 870 M-QRPPIGRNVHFITVTMWRNIIGQSIYQIIVLGVLTF 906
+RPP +V + +++ Q + I+ L F
Sbjct: 919 SKERPPSN----LFSVYILTSVLIQFVLHILSQVYLVF 952
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|216063 pfam00689, Cation_ATPase_C, Cation transporting ATPase, C-terminus | Back alignment and domain information |
|---|
Score = 158 bits (401), Expect = 2e-44
Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 7/175 (4%)
Query: 839 PLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQ- 897
PLT +Q+LW+N++ D L ALAL EPP LM+RPP + + R I+ Q +
Sbjct: 3 PLTPIQILWINLVTDGLPALALGFEPPEPDLMKRPPRKPKEPLFSRKLLRRILLQGLLIA 62
Query: 898 IIVLGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSS 957
I+ L V L G + + + T FN+ V Q+FN +N+R + + G+FS+
Sbjct: 63 IVTLLVFFLG----LLGFGISESGLAQTMAFNTLVLSQLFNALNARSLRRSLFKIGLFSN 118
Query: 958 WVFIAVLVATVGFQVIIVEL--LGTFATTVPLNWKLWLASVVIGAISMPFGVLLK 1010
+ + ++ ++ Q++I+ + L T PL+ + WL + + + + L K
Sbjct: 119 KLLLLAVLLSLLLQLLIIYVPGLQAVFGTTPLSLEQWLIVLGLALVVLLVVELRK 173
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. This family represents 5 transmembrane helices. Length = 175 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 2e-31
Identities = 170/659 (25%), Positives = 269/659 (40%), Gaps = 136/659 (20%)
Query: 162 MFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIV------TA 215
MFV E LT + + G + ++I+L V A
Sbjct: 35 MFVVEVGSILTTFLTIFPDLFG----------GTGGSRLFNLAITIILWFTVLFANFAEA 84
Query: 216 VSDYKQSLQFKALDKEKKNLIVQVTR-DGYRKKLSIYDLVVGDIVHLSIGDQVPADGILI 274
V++ + Q +L K K I ++ R DG + + +L GDIV + G+ +P+DG +I
Sbjct: 85 VAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVI 144
Query: 275 SGYSLTIDESSLSGETEPV--HINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVT 332
G ++DES+++GE+ PV D + GT+V K+ +T+ T R M+
Sbjct: 145 EG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDR-MIA 202
Query: 333 LSEGGEDE-TPLQVKLNGVATVIGKIGLVFAVLTFLV-LALRFLVEKAQHHQIKHWSSID 390
L EG E + TP ++ L L L L FL+ A + +S
Sbjct: 203 LVEGAERQKTPNEIALT----------------ILLSGLTLIFLLAVATLYPFAIYSGGG 246
Query: 391 AMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCI 450
A + A+ V ++ + GL A+ ++ M ++ + A E G +
Sbjct: 247 AASVTVLVALLVCLIPTTI-GGLLSAIGIA---GMDRVTQFNVIATSGRAVEAAGDVDTL 302
Query: 451 CTDKTGTLTT-NHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSE 509
DKTGT+T N +E + E+L + L S+ T
Sbjct: 303 LLDKTGTITLGNRQ-------ASEFIPVPGVSEEELADAAQ--------LASLADET--- 344
Query: 510 VVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLP 569
P R+I+E LG + +S V PF + + RMS V LP
Sbjct: 345 --------------PEGRSIVELAKKLGIELREDDLQSHAEFV-PF-TAQTRMSG-VDLP 387
Query: 570 NNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAF 629
R KGA + I + + G +P E L
Sbjct: 388 GGREIR---KGAVDAIR----RYVRERGGHIP------------------EDLDAAVDEV 422
Query: 630 QDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKA 689
+ G + EN ++ V+ +KD V+PG++E GI M+TGDN TA A
Sbjct: 423 SRLGGTPLV--VVENG-RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAA 479
Query: 690 IAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEV 749
IA E G+ DF +A ++P DK L+ Q + + +
Sbjct: 480 IAAEAGV----------DDF-----------------IAEATPEDKLALIRQEQAEGR-L 511
Query: 750 VAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYI 808
VA+TG+GTNDAPAL +AD+G+AM +GT+ AKE A+++ +D N T ++ V G+ + I
Sbjct: 512 VAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLI 569
|
Length = 681 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 6e-29
Identities = 158/678 (23%), Positives = 275/678 (40%), Gaps = 131/678 (19%)
Query: 172 TLIILMICAAVSIGVGIPTEGWPDGVYDGL--GIV-LSILLVVIVTAVSDYKQSLQFKAL 228
+L+ I A + G +++ + GI+ +++L AV++ + Q +L
Sbjct: 42 SLLTTCITIAPASF---GMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSL 98
Query: 229 DKEKKNLIVQVTR-DGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLS 287
KK ++ R DG K+ L GDIV + GD +P DG +I G + ++DES+++
Sbjct: 99 KGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVA-SVDESAIT 157
Query: 288 GETEPV--HINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGE-DETPLQ 344
GE+ PV D + GT++ + T+ T R M+ L EG + +TP +
Sbjct: 158 GESAPVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDR-MIALVEGAQRRKTPNE 216
Query: 345 VKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTI 404
+ L + + L L FL+ A + + V +
Sbjct: 217 IALT---------------ILLIALTLVFLLVTATLWPFAAYGGNAIS-----VTVLVAL 256
Query: 405 VVVAVPE---GLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTN 461
+V +P GL A+ ++ M +++ + A E G + DKTGT+T
Sbjct: 257 LVCLIPTTIGGLLSAIGIA---GMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLG 313
Query: 462 HMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNIL 521
+ + + E + D + L + ++ +
Sbjct: 314 NRLAS------EFIPAQGVDEKTLADAAQLASLAD------------------------- 342
Query: 522 GTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGA 581
TP ++I+ LG +S F + + RMS ++L N R KGA
Sbjct: 343 DTPEGKSIVILAKQLG--IREDDVQSLHATFVEF-TAQTRMSG-INLDNGRMIR---KGA 395
Query: 582 SEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESI 641
+ I + + A+G +P +L ++ + + L + + N
Sbjct: 396 VDAI----KRHVEANGGHIP------TDLDQAVDQVARQGGTPLVV----CEDNR----- 436
Query: 642 PENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGG 701
+ V+ +KD V+ G++E GI M+TGDN TA AIA E G+ D
Sbjct: 437 ------IYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGV--DDF 488
Query: 702 LAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAP 761
+A E T P++ LI + Q + +VA+TG+GTNDAP
Sbjct: 489 IA-EAT------PEDKIALIRQEQAEGK-------------------LVAMTGDGTNDAP 522
Query: 762 ALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVN 821
AL +AD+G+AM +GT+ AKE A+++ +D + T ++ V G+ + I F + N
Sbjct: 523 ALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIA-N 580
Query: 822 IVALVINFVAACITGSAP 839
VA + A + P
Sbjct: 581 DVAKYFAIIPAIFAAAYP 598
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 1e-28
Identities = 62/184 (33%), Positives = 94/184 (51%), Gaps = 29/184 (15%)
Query: 645 NYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAI 704
+ L+ V+ + D +RP +EA+ A GI V M+TGDN TA+AIAKE GI
Sbjct: 525 DGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGI-------- 576
Query: 705 EGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALH 764
+V A P DK +V +L+ VA+ G+G NDAPAL
Sbjct: 577 -------------------DEVRAELLPEDKAEIVRELQAE-GRKVAMVGDGINDAPALA 616
Query: 765 EADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVA 824
AD+G+AMG +GT+VA E ADV++M D+ + + R+ I++ + + N +A
Sbjct: 617 AADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIA 675
Query: 825 LVIN 828
+ +
Sbjct: 676 IPLA 679
|
Length = 713 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 1e-24
Identities = 151/643 (23%), Positives = 270/643 (41%), Gaps = 127/643 (19%)
Query: 203 IVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQ-VTRDGYRKKLSIYDLVVGDIVHL 261
++L+++ A+++ + Q AL + + + + + +DG + + DL G IV +
Sbjct: 72 LLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIVRV 131
Query: 262 SIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDRPF--LLSGTKVQDGSGKMLVTS 319
+ G+Q+P DG +I G + T+DES+++GE+ PV F ++ GT V ++ +TS
Sbjct: 132 ATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEITS 190
Query: 320 VGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVF--AVLTFLVLALRFLVEK 377
+ +++ + +TP ++ L T++ + ++F +LT LA +FL
Sbjct: 191 EPGHSFLDKMIGLVEGATRKKTPNEIAL---FTLLMTLTIIFLVVILTMYPLA-KFL--- 243
Query: 378 AQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVP-EGLPLAVTLSLAFAMKKLMNDKALVR 436
+++ AM IA+ + ++ GL A+ ++ M ++ L +
Sbjct: 244 -------NFNLSIAM------LIALAVCLIPTTIGGLLSAIGIA---GMDRVTQFNILAK 287
Query: 437 HLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFN 496
+ ET G + + DKTGT+T + + +KS E+L+K + ++ +
Sbjct: 288 SGRSVETCGDVNVLILDKTGTITYGNRMAD------AFIPVKSSSFERLVKAAYESSIAD 341
Query: 497 IFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFN 556
+ G +VK + P E + PF
Sbjct: 342 DTPE------GRSIVKL--AYKQHIDLPQEVG----------------------EYIPF- 370
Query: 557 SVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVING 616
+ + RMS V R KGA ++ K + G +P +L ++ G
Sbjct: 371 TAETRMSG-VKFTT----REVYKGAPNSMV----KRVKEAGGHIP------VDLDALVKG 415
Query: 617 FSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITV 676
S + L + E+N ++ V+ +KD ++ G+ E GI
Sbjct: 416 VSKKGGTPLV--------------VLEDN-EILGVIYLKDVIKDGLVERFRELREMGIET 460
Query: 677 RMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736
M TGDN TA IAKE G+ + +A P DK
Sbjct: 461 VMCTGDNELTAATIAKEAGVD---------------------------RFVAECKPEDK- 492
Query: 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTI 796
I V + +VA+TG+GTNDAPAL EA++GLAM +GT AKE A++I +D N T +
Sbjct: 493 INVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKL 551
Query: 797 VTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAP 839
+ V G+ + + F + N +A + A + P
Sbjct: 552 MEVVLIGKQLLMTRGSLTTFSIA-NDIAKYFAILPAMFMAAMP 593
|
Length = 673 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 108 bits (273), Expect = 2e-24
Identities = 63/198 (31%), Positives = 101/198 (51%), Gaps = 35/198 (17%)
Query: 647 TLIAVVGIKDPVRPGVREAVETCLAAG-ITVRMVTGDNIHTAKAIAKECGILTDGGLAIE 705
L+ V+ ++D +RP +EA+ AG I + M+TGDN A+A+A E GI
Sbjct: 374 ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID-------- 425
Query: 706 GTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHE 765
+V A P DK +V +L+ VVA+ G+G NDAPAL
Sbjct: 426 -------------------EVHAELLPEDKLAIVKELQEE-GGVVAMVGDGINDAPALAA 465
Query: 766 ADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVAL 825
AD+G+AMG AG++VA E AD+++++D+ +++ T R I++ + + L N+VA+
Sbjct: 466 ADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAI 524
Query: 826 VINFVAACITGSAPLTAV 843
+ G PL +
Sbjct: 525 PLA-----AGGLLPLWLL 537
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 2e-23
Identities = 61/183 (33%), Positives = 93/183 (50%), Gaps = 29/183 (15%)
Query: 645 NYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAI 704
N L V+ + D ++P +E ++ GI M+TGDN TAKA+AKE GI
Sbjct: 402 NGELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIEN------ 455
Query: 705 EGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALH 764
V A P DK L+ +L+ K VVA+ G+G NDAPAL
Sbjct: 456 ---------------------VRAEVLPDDKAALIKKLQEKGK-VVAMVGDGINDAPALA 493
Query: 765 EADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVA 824
+AD+G+A+G AGT+VA E ADV+++ ++ + T R I++ + + N++A
Sbjct: 494 QADVGIAIG-AGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIA 552
Query: 825 LVI 827
+ I
Sbjct: 553 IPI 555
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 94.6 bits (236), Expect = 3e-23
Identities = 34/88 (38%), Positives = 44/88 (50%)
Query: 505 NTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSV 564
N ++ I+G PTE A+L F LG D R V PFNS +KRMS
Sbjct: 4 NDAKFGENEEKNGGEIIGDPTESALLVFAEKLGIDVEELRARYPRVAEIPFNSERKRMST 63
Query: 565 LVSLPNNGGFRVFCKGASEIILNMCDKI 592
+ L ++ G+R+F KGA E IL C I
Sbjct: 64 VHKLEDDDGYRLFVKGAPERILERCSTI 91
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 4e-23
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 19/231 (8%)
Query: 239 VTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRD 298
V DG +++ + ++ VGDIV + G+++P DG+++SG S ++DES L+GE+ PV
Sbjct: 216 VRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSS-SVDESMLTGESLPVEKKPG 274
Query: 299 RPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIG 358
+ +GT DGS + VT VG T R++ + E + P+Q + VA+ +
Sbjct: 275 DE-VFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVV 333
Query: 359 LVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVT 418
LV A LTF + W A+ ++V+A P L LA
Sbjct: 334 LVIAALTFAL-----------------WPLFGGGDWETALYRALAVLVIACPCALGLATP 376
Query: 419 LSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLW 469
++ + + L++ A E + + DKTGTLT VT +
Sbjct: 377 TAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVV 427
|
Length = 713 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 1e-21
Identities = 78/296 (26%), Positives = 134/296 (45%), Gaps = 32/296 (10%)
Query: 172 TLIILMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKE 231
L+ L AA ++G+ V +G ++ LL + + + S AL
Sbjct: 3 LLMALATIAAYAMGL----------VLEGALLLFLFLLGETLEERAKGRASDALSALLAL 52
Query: 232 KKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETE 291
+ + DG +++ + +L VGDIV + G+++P DG++ISG S +DES+L+GE+
Sbjct: 53 APSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISGES-EVDESALTGESM 111
Query: 292 PVHINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVA 351
PV + +GT DGS + VT +G + +++ + E + P+Q + +A
Sbjct: 112 PVEKKEGDE-VFAGTINGDGSLTIRVTKLGEDSTLAQIVELVEEAQSSKAPIQRLADRIA 170
Query: 352 TVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPE 411
+ L A+LTF+V + ++ Y A+AV +VVA P
Sbjct: 171 SYYVPAVLAIALLTFVVWLA-----------LGALGAL-------YRALAV--LVVACPC 210
Query: 412 GLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTK 467
L LA +++ A+ L++ A E + + DKTGTLTT V
Sbjct: 211 ALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVD 266
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 99.4 bits (248), Expect = 5e-21
Identities = 123/538 (22%), Positives = 197/538 (36%), Gaps = 144/538 (26%)
Query: 433 ALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSD 492
A VR + E +G I +DKTGTLT N M K I + + + ++ +
Sbjct: 345 ASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLGS 404
Query: 493 AVFNIFLQSIFQNTGSEVVKDKDGRTNI-LGTPTERAILEFGLIL---------GGDSTF 542
V N S+ + D + P + I EF L L D
Sbjct: 405 YVEN--ENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGP 462
Query: 543 HR--------EESAIVK----------------------------------VEPFNSVKK 560
+E+A+VK V FNS +K
Sbjct: 463 EEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRK 522
Query: 561 RMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSE 620
RMSV+V P +G ++ CKGA +I N ++EE +++L N ++SE
Sbjct: 523 RMSVIVRNP-DGRIKLLCKGADTVIFKRLSSGGNQ------VNEETKEHLEN----YASE 571
Query: 621 ALRTLCLAFQDI----------KGNHK--------------AESIPENNYTLIAVVGIKD 656
LRTLC+A++++ + N AESI E + L+ I+D
Sbjct: 572 GLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESI-EKDLILLGATAIED 630
Query: 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG---------------- 700
++ GV E +E AGI + ++TGD + TA I C +L+
Sbjct: 631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSDSLDATRS 690
Query: 701 -------------------------GLAIEGTD----FRSKNPQEMQELIPKLQ--VMAR 729
L I+G + +E +L K + + R
Sbjct: 691 VEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCR 750
Query: 730 SSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTE--VAKENADVI 787
SP+ K +V ++ + G+G ND + EAD+G+ GI+G E A +D
Sbjct: 751 VSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGV--GISGKEGMQAVMASDFA 808
Query: 788 IMDDNFTTIVTVARW-GRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAVQ 844
I F + + GR Y I K + + N++ +I F + G + T +
Sbjct: 809 I--GQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYE 864
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|204949 pfam12515, CaATP_NAI, Ca2+-ATPase N terminal autoinhibitory domain | Back alignment and domain information |
|---|
Score = 85.5 bits (212), Expect = 1e-20
Identities = 31/47 (65%), Positives = 33/47 (70%)
Query: 4 YLKKNFDVDPKRPSEEALMRWRSAVRVVKNPRRRFRMVADLAKRAEA 50
YL FD+ K SEEAL RWR AV +VKN RRRFR ADLAKR EA
Sbjct: 1 YLDDPFDIPAKNSSEEALRRWRQAVGLVKNARRRFRYTADLAKRCEA 47
|
This domain family is found in eukaryotes, and is approximately 50 amino acids in length. The family is found in association with pfam00689, pfam00122, pfam00702, pfam00690. There is a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important. This family is the N terminal autoinhibitory domain of an endosomal Ca2+-ATPase. Length = 47 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 95.9 bits (239), Expect = 2e-20
Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 34/201 (16%)
Query: 647 TLIAVVGIKDPVRPGVREAVETCLAAGIT-VRMVTGDNIHTAKAIAKECGILTDGGLAIE 705
T + + + D RP EA+ A GI V M+TGD A+ +A+E GI
Sbjct: 352 TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGI--------- 402
Query: 706 GTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHE 765
+V A P DK +V +LR + VA+ G+G NDAPAL
Sbjct: 403 ------------------DEVHAELLPEDKLEIVKELREKY-GPVAMVGDGINDAPALAA 443
Query: 766 ADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVAL 825
AD+G+AMG +G++VA E ADV++++D+ + + R R +++ V L + ++ +
Sbjct: 444 ADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLI 503
Query: 826 VINFVAACITGSAPLTAVQLL 846
++ + G PL L
Sbjct: 504 LLA-----LFGVLPLWLAVLG 519
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 95.9 bits (239), Expect = 2e-20
Identities = 70/296 (23%), Positives = 124/296 (41%), Gaps = 37/296 (12%)
Query: 175 ILMICAAV-SIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKK 233
+LM AA+ ++ +G EG L +LL I + +Y +AL K
Sbjct: 3 LLMALAALGAVAIGEYLEG-----------ALLLLLFSIGETLEEYASGRARRAL-KALM 50
Query: 234 NLI---VQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGET 290
L +V R G +++++ +L VGD+V + G++VP DG+++SG S T+DES+L+GE+
Sbjct: 51 ELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTS-TVDESALTGES 109
Query: 291 EPVHINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGV 350
PV + +G DG ++VT + + + +V L E + +
Sbjct: 110 VPVEKAPGDE-VFAGAINLDGVLTIVVTKLPADSTIAK-IVNLVEEAQSRKAKTQRF--- 164
Query: 351 ATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVP 410
+ + L + L + + A+ ++VVA P
Sbjct: 165 IDRFARYYTPVVLAIALAIWL---------------VPGLLKRWPFWVYRALVLLVVASP 209
Query: 411 EGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVT 466
L ++ + A+ L++ +A E + + DKTGTLTT V
Sbjct: 210 CALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVV 265
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 90.8 bits (226), Expect = 1e-18
Identities = 79/344 (22%), Positives = 147/344 (42%), Gaps = 38/344 (11%)
Query: 156 PARSFWMFVWEAL-----HDLTLIILMICAA------VSIGVGIPTEGWPDGVYDGLGIV 204
R F+ W+AL + TLI L A + + T +D ++
Sbjct: 1 AGRPFYKSAWKALRHKTPNMDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAML 60
Query: 205 LSILLV-VIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSI 263
++ +L+ + ++ + S L K + + +T DG +++ + L GDIV +
Sbjct: 61 ITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTDDGEIEEVPVELLQPGDIVRVLP 120
Query: 264 GDQVPADGILISGYSLTIDESSLSGETEPVHINRDRPFLLSGTKVQDGSGKMLVTSVGMR 323
G+++P DG +I G S +DES ++GE+ PV P +++GT GS + T+ G
Sbjct: 121 GEKIPVDGTVIEGES-EVDESLVTGESLPVPKKVGDP-VIAGTVNGTGSLVVRATATGED 178
Query: 324 TEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQI 383
T +++ + + + + P+Q + VA + + A++TF++
Sbjct: 179 TTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVI--------------- 223
Query: 384 KHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACET 443
W + + +AVT++++A P L LA +A A + L++ A E
Sbjct: 224 --WLIL-GADFVFALEVAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALER 280
Query: 444 MGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLK 487
+ + DKTGTLT VT + D ++LL
Sbjct: 281 AANIDTVVFDKTGTLTQGKPTVT------DVHVFGESDRDELLA 318
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 90.8 bits (226), Expect = 2e-18
Identities = 68/218 (31%), Positives = 102/218 (46%), Gaps = 43/218 (19%)
Query: 645 NYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAI 704
N ++ ++ ++D +R R+A+ A GI M+TGDN A AIA E GI
Sbjct: 556 NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI-------- 607
Query: 705 EGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALH 764
DFR A P DK VT+L +A+ G+G NDAPA+
Sbjct: 608 ---DFR-----------------AGLLPEDKVKAVTELNQ--HAPLAMVGDGINDAPAMK 645
Query: 765 EADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVA 824
A IG+AMG +GT+VA E AD + + + + R+ + NI++ + L + +
Sbjct: 646 AASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIF 704
Query: 825 LVINFVAACITGSAPLTAVQLLWVNMIMDTLGALALAT 862
LV + ITG LW+ ++ D+ GA AL T
Sbjct: 705 LVTTLLG--ITG---------LWLAVLADS-GATALVT 730
|
Length = 741 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 89.5 bits (223), Expect = 4e-18
Identities = 56/149 (37%), Positives = 83/149 (55%), Gaps = 29/149 (19%)
Query: 651 VVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFR 710
V+ +KD V+PG++E GI M+TGDN TA AIA E G+ D DF
Sbjct: 439 VIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV--D--------DF- 487
Query: 711 SKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGL 770
+A ++P DK L+ Q + + +VA+TG+GTNDAPAL +AD+G+
Sbjct: 488 ----------------LAEATPEDKLALIRQEQAEGR-LVAMTGDGTNDAPALAQADVGV 530
Query: 771 AMGIAGTEVAKENADVIIMDDNFTTIVTV 799
AM +GT+ AKE +++ +D N T ++ V
Sbjct: 531 AMN-SGTQAAKEAGNMVDLDSNPTKLIEV 558
|
Length = 679 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 72.2 bits (178), Expect = 1e-15
Identities = 21/69 (30%), Positives = 27/69 (39%)
Query: 115 ESRGGVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLI 174
VE + + L G+ E R YG N EK +S W D +I
Sbjct: 1 WHTLSVEEVLARLGTDLEKGLTEAEAEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVI 60
Query: 175 ILMICAAVS 183
IL+I A VS
Sbjct: 61 ILLIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 75.3 bits (185), Expect = 1e-13
Identities = 113/521 (21%), Positives = 198/521 (38%), Gaps = 154/521 (29%)
Query: 398 FAIAVTIVVVAVPEGLPLAVTL---SLAFAM--KKLMNDKA-----LVRHLSACETMGSA 447
F ++V + + +P L +++ L A+ M M D+A R L+ E +G
Sbjct: 394 FLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQI 453
Query: 448 SCICTDKTGTLTTNHM--VVTKLWICNEAKTIKSGDNE----------KLLKPSVSDAVF 495
+ +DKTGTLT N M +W + + N+ K+L+P + V
Sbjct: 454 KYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVD 513
Query: 496 NIFLQSIFQNTGSE-----------------------VVKDKDGRTNIL-----GTPTER 527
L+ +G + VV D T L +P E+
Sbjct: 514 PQLLE--LSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQ 571
Query: 528 AIL----EFGLILGGDSTFH--------REESAIVKVEPFNSVKKRMSVLVSLPNNGGFR 575
A++ +G +L ++ H R+ ++ + F+S +KRMSV++ P+ +
Sbjct: 572 ALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKT-VK 630
Query: 576 VFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGN 635
VF KGA + ++ D+ +N + + +L +SS LRTL + +++ +
Sbjct: 631 VFVKGADTSMFSVIDRSLNMN-----VIRATEAHLHT----YSSLGLRTLVVGMRELNDS 681
Query: 636 H-----------------------KAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAA 672
K S ENN T++ I+D ++ GV EA+E+ A
Sbjct: 682 EFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTA 741
Query: 673 GITVRMVTGDNIHTAKAIAKECGILTDG-------------------------------- 700
GI V ++TGD TA +I +LT+
Sbjct: 742 GIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVS 801
Query: 701 -----------------GLAIEGTDFRSKNPQEMQELIPKLQ------VMARSSPTDKYI 737
L I+GT E++E + +L + R +P K
Sbjct: 802 GISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAG 861
Query: 738 LVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTE 778
+V ++N ++ G+G ND + AD+G+ GI+G E
Sbjct: 862 IVALVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQE 900
|
Length = 1178 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 74.8 bits (184), Expect = 1e-13
Identities = 52/144 (36%), Positives = 71/144 (49%), Gaps = 33/144 (22%)
Query: 648 LIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGI--LTDGGLAIE 705
A++ I+DP+R A++ AG + M+TGDN TA AIAKE GI + G L
Sbjct: 641 AAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGVL--- 697
Query: 706 GTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHE 765
P E I +LQ R VA+ G+G NDAPAL +
Sbjct: 698 --------PDGKAEAIKRLQSQGRQ-------------------VAMVGDGINDAPALAQ 730
Query: 766 ADIGLAMGIAGTEVAKENADVIIM 789
AD+G+AMG G++VA E A + +M
Sbjct: 731 ADVGIAMG-GGSDVAIETAAITLM 753
|
Length = 834 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 61.9 bits (151), Expect = 1e-09
Identities = 63/230 (27%), Positives = 111/230 (48%), Gaps = 27/230 (11%)
Query: 241 RDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDRP 300
RDG R++++I DL GD++ ++ G ++PADG L+S ++ + DES+L+GE+ PV
Sbjct: 249 RDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA-SFDESALTGESIPVERATGEK 307
Query: 301 FLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLV 360
+ +G D + V S + R++ + E E P++ ++ + + ++
Sbjct: 308 -VPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIML 366
Query: 361 FAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGL----PLA 416
A+L LV L F A W + +T++++ P L P A
Sbjct: 367 VALLVILVPPLLF----AA-----PW--------QEWIYRGLTLLLIGCPCALVISTPAA 409
Query: 417 VTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVT 466
+T LA A ++ AL++ +A E +G + + DKTGTLT VT
Sbjct: 410 ITSGLAAAARR----GALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVT 455
|
Length = 741 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 2e-08
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 638 AESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGIL 697
A + + ++ ++ + DP+ PG REA++ AGI + ++TGDN TA AIA+ G+
Sbjct: 75 ATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLF 134
Query: 698 TDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGT 757
A P PK+ + L + V E V + G+G
Sbjct: 135 DALVSADLYGLVGVGKPD------PKI-----------FELALEELGVKPEEVLMVGDGV 177
Query: 758 NDAPALHEAD 767
ND PA A
Sbjct: 178 NDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 51.4 bits (124), Expect = 3e-08
Identities = 16/65 (24%), Positives = 27/65 (41%)
Query: 120 VEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMIC 179
+E + + L G++SEE + R YG N S + H+ + IL+
Sbjct: 9 LEEVLERLQTDLEKGLSSEEAARRLERYGPNELPPPKKTSPLLRFLRQFHNPLIYILLAA 68
Query: 180 AAVSI 184
A +S
Sbjct: 69 AVLSA 73
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 5e-08
Identities = 69/239 (28%), Positives = 104/239 (43%), Gaps = 41/239 (17%)
Query: 239 VTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEP------ 292
VT +G K + + D+ G ++ L+ GD+VP DG + G +DE+ L+GE P
Sbjct: 328 VTDEG-EKSVPLADVQPGMLLRLTTGDRVPVDGEITQG-EAWLDEAMLTGEPIPQQKGEG 385
Query: 293 --VHINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRL--MVTLSEGGEDETPLQVKLN 348
VH +GT VQDGS ++VG T R+ MV ++ + E
Sbjct: 386 DSVH---------AGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPE-------- 428
Query: 349 GVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNY-FAIAVTIVVV 407
+ + KI VF V +V+A LV A W + Y IA T++++
Sbjct: 429 -IGQLADKISAVF-VPVVVVIA---LVSAAI------WYFFGPAPQIVYTLVIATTVLII 477
Query: 408 AVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVT 466
A P L LA +S+ + + LVR A + + + DKTGTLT V
Sbjct: 478 ACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVV 536
|
Length = 834 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 50.2 bits (121), Expect = 5e-06
Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 21/156 (13%)
Query: 162 MFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIV------TA 215
MFV E +++ ++ A + G G + +++ L V A
Sbjct: 36 MFVVEVG---SILTTILTIAPLLFQS--------GGPAGFNLAITLWLWFTVLFANFAEA 84
Query: 216 VSDYKQSLQFKALDKEKKNLIVQ-VTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILI 274
+++ + Q +L KK+ + + G +++ +L GDIV + G+ +PADG +I
Sbjct: 85 LAEGRGKAQADSLRGAKKDTFARKLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVI 144
Query: 275 SGYSLTIDESSLSGETEPV--HINRDRPFLLSGTKV 308
G ++DES+++GE+ PV D + GT+V
Sbjct: 145 EG-VASVDESAITGESAPVIRESGGDFSSVTGGTRV 179
|
Length = 679 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 6e-05
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 721 IPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG-LAMGIAGT-E 778
IP +V A + P K ++ +L+ +++VV V GNG ND AL EAD+G + G E
Sbjct: 68 IPVERVFAGADPEMKAKIIRELKKRYEKVVMV-GNGANDILALREADLGICTIQQEGVPE 126
Query: 779 VAKENADVIIMD 790
ADV++ +
Sbjct: 127 RLLLTADVVLKE 138
|
Length = 152 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 5e-04
Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 2/116 (1%)
Query: 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEM 717
+ PGV+EA++ GI + + T + + +E G+ I P+E
Sbjct: 25 LYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEG 84
Query: 718 QELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPAL-HEADIGLAM 772
L + + +P DK + +L V E V + G+ ND +G+A+
Sbjct: 85 LFLGGGPFDIGKPNP-DKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 0.003
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 207 ILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDG--YRKKLSIYDLVVGDIVHLSIG 264
+ V+IVTA+ + + ++ + DKE N + +V + + DL VGDIV +
Sbjct: 57 LAFVLIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWK-DLRVGDIVKVKKD 115
Query: 265 DQVPADGILIS 275
+++PAD +L+S
Sbjct: 116 ERIPADLLLLS 126
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1039 | |||
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.92 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.88 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.87 | |
| PF12515 | 47 | CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory d | 99.56 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.54 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.47 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.2 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 99.08 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.02 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.97 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.97 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.93 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.92 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.91 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.9 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.89 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.85 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.84 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.82 | |
| PLN02887 | 580 | hydrolase family protein | 98.8 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.77 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.71 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.7 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.68 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.59 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.55 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.54 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.51 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.44 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.38 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.32 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.29 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.27 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.2 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.2 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.2 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.17 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.12 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.04 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.03 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.02 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.01 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.94 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.93 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.92 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.87 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.86 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.79 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.75 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.7 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.57 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.55 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.5 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.49 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.41 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.4 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.38 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.34 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.34 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 97.28 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.13 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.12 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 97.09 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.09 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.03 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.99 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.97 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.94 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.94 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.87 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 96.78 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 96.75 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.72 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.62 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.61 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.5 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.39 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.32 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.32 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.32 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.28 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.23 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.2 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 96.16 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.14 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.95 | |
| PLN02940 | 382 | riboflavin kinase | 95.94 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 95.93 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 95.92 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 95.9 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 95.84 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 95.77 | |
| PLN02580 | 384 | trehalose-phosphatase | 95.76 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.69 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 95.65 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 95.62 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.28 | |
| PLN02811 | 220 | hydrolase | 94.93 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 94.87 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 94.66 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 94.52 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 94.48 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 94.23 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 94.13 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 94.12 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 94.12 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 94.09 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 93.92 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 93.89 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 93.84 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 93.71 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 93.71 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 93.27 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 93.26 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 92.76 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 92.4 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 92.31 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 92.18 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 92.01 | |
| PLN03017 | 366 | trehalose-phosphatase | 91.98 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 91.8 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 91.71 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 91.34 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 90.98 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 90.85 | |
| PLN02423 | 245 | phosphomannomutase | 89.96 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 89.89 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 89.76 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 88.63 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 88.58 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 88.03 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 87.33 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 86.77 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 86.09 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 85.69 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 84.91 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 83.71 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 83.45 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 83.26 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 80.51 |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-236 Score=1995.28 Aligned_cols=993 Identities=58% Similarity=0.936 Sum_probs=945.9
Q ss_pred cccCCccCCCCCCCHHHHHhhHHHhhhhcCccccchhhHHhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCcc
Q 001638 4 YLKKNFDVDPKRPSEEALMRWRSAVRVVKNPRRRFRMVADLAKRAEAERKRKKLQEKLRVALYVQKAALHFIDAGSRPIE 83 (1039)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (1039)
++.++|..+.+|++.++++|||.|. .+++++|||||.+++++..+....|+ |.|.+..+++|+.+|+++..++ |
T Consensus 2 ~~~~~~~~~~~n~~~~~~~~~~~a~-~~~~~~~~~~~~~~l~~~~~~~~~r~----~~r~~~~~~~a~~~~~~~~~~~-e 75 (1034)
T KOG0204|consen 2 LLDKDFVVSMKNSSIEALQRWRLAY-IVLEASRRFRFGASLKKLRELMEPRR----KIRSAVLVSKAAALFIDAGSRT-E 75 (1034)
T ss_pred Ccccccccccccchhhhhhhhhhhh-hhcccchhhccccCHHHHHHHHHHHh----hhhhhhcccchhhhhhcccccc-c
Confidence 4567888888999999999999766 99999999999999999998777777 8999999999999999987653 4
Q ss_pred cccccccccCCcccCHhHHHhhhccCChhHHHHhCCHHHHHHHhCCCCCCCCCH--HHHHHHHhhcCCCccCCCCCCcHH
Q 001638 84 YKLSQETLLAGYGIEPDELESIVRSHNSKAVESRGGVEGLAREVSVSLPDGVAS--EEVSNRQNVYGFNRYAEKPARSFW 161 (1039)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~gv~~~~~~l~t~~~~GL~~--~~~~~r~~~~G~N~~~~~~~~s~~ 161 (1039)
|+. .+++|+|.++++.+|.+.|+++||++|+|+.|+||+..||+. +|..+|++.||.|.+|++++++||
T Consensus 76 ~~~---------~i~~e~l~~i~~~~~~~~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl 146 (1034)
T KOG0204|consen 76 YTL---------GIGAEELVKIVKEHDLKALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFL 146 (1034)
T ss_pred ccc---------ccCHHHHHHHhhccchhhhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHH
Confidence 433 688999999999999999999999999999999999999987 679999999999999999999999
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEe
Q 001638 162 MFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTR 241 (1039)
Q Consensus 162 ~~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR 241 (1039)
+|+||+++|.++++|++||++|+++|+++++++++||||++|++++++|++++|++||+|++||++|++++++.+++|+|
T Consensus 147 ~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR 226 (1034)
T KOG0204|consen 147 RFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIR 226 (1034)
T ss_pred HHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCceeEeccCCCCCCCccccCC-CCceeecccEEeeCCeEEEEEEe
Q 001638 242 DGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINR-DRPFLLSGTKVQDGSGKMLVTSV 320 (1039)
Q Consensus 242 ~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGEs~pv~k~~-~~~~l~sGt~v~~G~~~~~V~~v 320 (1039)
||++++|++.|||||||+.|+.||+|||||++++|++|.+|||+|||||++++|+. .+|||+|||++.+|+|+|+||+|
T Consensus 227 ~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaV 306 (1034)
T KOG0204|consen 227 GGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAV 306 (1034)
T ss_pred CCEEEEEEEeeeeeccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999986 89999999999999999999999
Q ss_pred ccchhhHHHHHHhccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--cccchhhhHHHHHHH
Q 001638 321 GMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQI--KHWSSIDAMKLLNYF 398 (1039)
Q Consensus 321 G~~T~~gki~~~~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~--~~w~~~~~~~~~~~~ 398 (1039)
|+||+||++|..+.++.+++||||.+|+++|..|+++++.+|++++++++++|+.+.+..++. ..|.......++++|
T Consensus 307 Gmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f 386 (1034)
T KOG0204|consen 307 GMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFF 386 (1034)
T ss_pred eecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHh
Confidence 999999999999999998999999999999999999999999999999999999988776554 466666788999999
Q ss_pred HHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccc
Q 001638 399 AIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIK 478 (1039)
Q Consensus 399 ~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 478 (1039)
+++++++|+|+|||||+|||++|||+++|||+|++|||+++||||||++++||+|||||||+|+|+|++.|++++.+..+
T Consensus 387 ~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~ 466 (1034)
T KOG0204|consen 387 IIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVN 466 (1034)
T ss_pred hheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeecccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998876432
Q ss_pred cCCcccccCCCCCHHHHHHHHHHHHhccCCceeecCCC--CccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCC
Q 001638 479 SGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDG--RTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFN 556 (1039)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~ 556 (1039)
... .+.+++...+++.++++.|++.++..++.+ ..++.|||||+|||.|+..+|++++..|++.++++++|||
T Consensus 467 ~~~-----~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FN 541 (1034)
T KOG0204|consen 467 SPK-----SSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFN 541 (1034)
T ss_pred Ccc-----cccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccC
Confidence 211 146889999999999999999999887766 7799999999999999999999999999999999999999
Q ss_pred CCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCC-
Q 001638 557 SVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGN- 635 (1039)
Q Consensus 557 s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~- 635 (1039)
|.||||+++++.++.+.| +|||||+|+||.+|++|++.+|+..+++++.++.+++.|+.||++||||+|+|||++...
T Consensus 542 S~kK~~gvvi~~~~~~~y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~ 620 (1034)
T KOG0204|consen 542 SVKKRMGVVIKLPDGGHY-VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGP 620 (1034)
T ss_pred cccceeeEEEEcCCCCeE-EEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCC
Confidence 999999999998873336 999999999999999999999999999999999999999999999999999999995433
Q ss_pred -----CCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCC--ceeeCcc
Q 001638 636 -----HKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGG--LAIEGTD 708 (1039)
Q Consensus 636 -----~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~--~vi~G~~ 708 (1039)
.++++.++.+++++|++||+||+||||++||+.|++|||+|+|+||||..||++||.+|||+++++ .+++|++
T Consensus 621 ~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~e 700 (1034)
T KOG0204|consen 621 DEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKE 700 (1034)
T ss_pred CCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchh
Confidence 123357789999999999999999999999999999999999999999999999999999999887 9999999
Q ss_pred cccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEe
Q 001638 709 FRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVII 788 (1039)
Q Consensus 709 ~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl 788 (1039)
|++++++|+++++++++|+||++|.||+.+|+.|+++ |++||+||||+||+||||+||||+||||.|||+|||+|||||
T Consensus 701 Fr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~-g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi 779 (1034)
T KOG0204|consen 701 FRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQ-GEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIII 779 (1034)
T ss_pred hhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhc-CcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEE
Confidence 9999999999999999999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred ecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHhhHHHHhHhccCCCCcc
Q 001638 789 MDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAVQLLWVNMIMDTLGALALATEPPHEG 868 (1039)
Q Consensus 789 ~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alala~e~p~~~ 868 (1039)
+||||++|+++++|||++|+||+||+|||||+|+++++++|++++..+.+||+++||||+|+|||+|+|||||||||+++
T Consensus 780 ~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~ 859 (1034)
T KOG0204|consen 780 LDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDE 859 (1034)
T ss_pred EcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCC--ccchhhHHHHHHHHHHHHHHHHHhcccc
Q 001638 869 LMQRPPIGRNVHFITVTMWRNIIGQSIYQIIVLGVLTFCGKKILKLSGPN--ATLILNTFIFNSFVFCQVFNEINSRDME 946 (1039)
Q Consensus 869 lm~~~P~~~~~~li~~~~~~~i~~~~i~q~~v~~~l~~~~~~~~~~~~~~--~~~~~~T~~f~~~v~~qv~n~~~~r~~~ 946 (1039)
+|+|+|++|++|||++.||+||++|++||+++++++.|.|..+|+.+++. .+..++|++||+|||||+||+||+|+++
T Consensus 860 Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~ 939 (1034)
T KOG0204|consen 860 LMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKID 939 (1034)
T ss_pred HhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchh
Confidence 99999999999999999999999999999999999999999999876654 3678899999999999999999999999
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHHHHhhhhhhhcccCCChHHHHHHHHHHHHHHHHHHHHhhhccCCcc
Q 001638 947 KINVFRGIFSSWVFIAVLVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVGTCT 1018 (1039)
Q Consensus 947 ~~~~f~~~~~n~~f~~~~~~~~~~q~~~v~~~~~~~~~~~l~~~~w~~~i~~~~~~~~~~~~~k~i~~~~~~ 1018 (1039)
+.|+|+|+++|++|++++.+|+++|+++++|+|.+|+++||+|.||++|+++|+++|++++++|++|++..|
T Consensus 940 ~~NvFkgi~~N~~F~~ii~~T~v~QviIveF~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~iP~~~~~ 1011 (1034)
T KOG0204|consen 940 ERNVFKGIFRNRLFCVIITITVVSQVIIVEFGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCIPVSSLP 1011 (1034)
T ss_pred HHhHHHHHhcCceEEEEeeeeeehhhhhhhhcCcceeeecccHHHHHHHHHHHHHHHHHHHHheeccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999888
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-161 Score=1381.42 Aligned_cols=879 Identities=32% Similarity=0.508 Sum_probs=760.4
Q ss_pred CHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCccc
Q 001638 119 GVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVY 198 (1039)
Q Consensus 119 gv~~~~~~l~t~~~~GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~ 198 (1039)
.|++.+..+.||+.+||+.+|+.+|++.||+|+++....+|+|+.+++||.|+...+|+.+|++|+++. .|-
T Consensus 8 ~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~--------~~~ 79 (972)
T KOG0202|consen 8 SVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA--------DFD 79 (972)
T ss_pred cHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH--------hcc
Confidence 688899999999999999999999999999999999999999999999999999999999999999987 355
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCc
Q 001638 199 DGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYS 278 (1039)
Q Consensus 199 d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~ 278 (1039)
|+++|.+++++++.+..+++|+.++....|.+. .+..++|+|+|+.+.++++||||||||.|+.||+||||.++++..+
T Consensus 80 e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l-~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~s 158 (972)
T KOG0202|consen 80 EPFVITLIIVINVTVGFVQEYNAEKALEALKEL-VPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKS 158 (972)
T ss_pred cceeeeeeeeeeeeeeeeeehhhHHHHHHHHhc-CCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEeeee
Confidence 788999999999999999999999999999864 5779999999999999999999999999999999999999999999
Q ss_pred eeEeccCCCCCCCccccC-------------CCCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCCCchHH
Q 001638 279 LTIDESSLSGETEPVHIN-------------RDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQV 345 (1039)
Q Consensus 279 l~VDES~LTGEs~pv~k~-------------~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~ 345 (1039)
|.||||+|||||.|+.|. .+.|++|+||.|..|.++++|++||.+|++|++...+++.++++||||+
T Consensus 159 l~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTPLqk 238 (972)
T KOG0202|consen 159 LRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTPLQK 238 (972)
T ss_pred eeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCcHHH
Confidence 999999999999999995 3467899999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHH
Q 001638 346 KLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHH-QIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFA 424 (1039)
Q Consensus 346 ~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~-~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~ 424 (1039)
++|.+.+.+.++..++++.+.++- +.++. .. ...+| +.....+|.+++++.|+|+|||||..+|++||.+
T Consensus 239 ~ld~~G~qLs~~is~i~v~v~~~n-ig~f~----~p~~~g~~----fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG 309 (972)
T KOG0202|consen 239 KLDEFGKQLSKVISFICVGVWLLN-IGHFL----DPVHGGSW----FKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALG 309 (972)
T ss_pred HHHHHHHHHHHHheehhhhHHHhh-hhhhc----cccccccc----hhchhhhhhHHHHHHHHhccCCCcchhhhhHHHh
Confidence 999999999865544443332221 12222 10 01123 3456789999999999999999999999999999
Q ss_pred HHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccc------c---CCcc----c---ccCC
Q 001638 425 MKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIK------S---GDNE----K---LLKP 488 (1039)
Q Consensus 425 ~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~------~---~~~~----~---~~~~ 488 (1039)
.+||+|++++||++.++||||.+++||+|||||||+|+|++.++|+.+...... . .... . ....
T Consensus 310 ~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~ 389 (972)
T KOG0202|consen 310 TRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDK 389 (972)
T ss_pred HHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCcccccc
Confidence 999999999999999999999999999999999999999999999876432111 0 0000 0 0001
Q ss_pred CCCHHHHHHHHHHHHhccCCceeecCCCCccccCCchHHHHHHHHHHhCCCccc---------------ccccccEEEEe
Q 001638 489 SVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTF---------------HREESAIVKVE 553 (1039)
Q Consensus 489 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~---------------~~~~~~il~~~ 553 (1039)
....+.+.-+++..+.|+.+.+..++.+.++..|.|||.||..++.++|+.-.. ....++.+.++
T Consensus 390 ~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~el 469 (972)
T KOG0202|consen 390 AGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAEL 469 (972)
T ss_pred ccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEe
Confidence 112233344445445555555554444667789999999999999999875433 12234567999
Q ss_pred cCCCCCCceEEEEEcCCC-CeEEEEEeCcHHHHHhhhhhhhccCC-ccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEe
Q 001638 554 PFNSVKKRMSVLVSLPNN-GGFRVFCKGASEIILNMCDKIINADG-KAVPISEEQRKNLTNVINGFSSEALRTLCLAFQD 631 (1039)
Q Consensus 554 pF~s~rkrmsvvv~~~~~-~~~~~~~KGa~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~ 631 (1039)
||+|+||+|+|.+..+.+ .++.+|+|||+|.|+++|++++..+| ...||++..|+.+.+...+|+++|||||++|+++
T Consensus 470 pFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~ 549 (972)
T KOG0202|consen 470 PFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKD 549 (972)
T ss_pred ecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccC
Confidence 999999999999987652 35899999999999999998887776 5589999999999999999999999999999998
Q ss_pred cCC-CC--------CcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCC-
Q 001638 632 IKG-NH--------KAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGG- 701 (1039)
Q Consensus 632 l~~-~~--------~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~- 701 (1039)
... .+ ......|.||+|+|++||.||||+|++++|+.|+++||+|+|+|||+..||.+||+++||..++.
T Consensus 550 ~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed 629 (972)
T KOG0202|consen 550 SPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDED 629 (972)
T ss_pred CcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcc
Confidence 764 21 12235689999999999999999999999999999999999999999999999999999998766
Q ss_pred ---ceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcH
Q 001638 702 ---LAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTE 778 (1039)
Q Consensus 702 ---~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~ 778 (1039)
.+++|++|+.++++|+++.+.+..||+|++|++|.++|+.||+. |++|||||||+||+||||.||||||||++||+
T Consensus 630 ~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~-geivAMTGDGVNDApALK~AdIGIAMG~~GTd 708 (972)
T KOG0202|consen 630 VSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSR-GEVVAMTGDGVNDAPALKKADIGIAMGISGTD 708 (972)
T ss_pred ccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhc-CCEEEecCCCccchhhhhhcccceeecCCccH
Confidence 89999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHhhHHHHh
Q 001638 779 VAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAVQLLWVNMIMDTLGAL 858 (1039)
Q Consensus 779 ~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~al 858 (1039)
+||++||+||.||||++|+.++++||.+|+||++|+.|+++.|+.++.+.|+++.+..+.||+|+|+||+|++||.+||.
T Consensus 709 VaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~ 788 (972)
T KOG0202|consen 709 VAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPAT 788 (972)
T ss_pred hhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHH---HHHHHhcc-c---------cccc----CCCC---
Q 001638 859 ALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIVL---GVLTFCGK-K---------ILKL----SGPN--- 918 (1039)
Q Consensus 859 ala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~i~q~~v~---~~l~~~~~-~---------~~~~----~~~~--- 918 (1039)
+|+.|||++|+|+|||++.++++++...+.+++..++|-.+.. +...+.+. . |..+ .+.+
T Consensus 789 aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~ 868 (972)
T KOG0202|consen 789 ALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAV 868 (972)
T ss_pred hcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhh
Confidence 9999999999999999999999999999988888887754322 11222210 0 0000 0000
Q ss_pred -ccchhhHHHHHHHHHHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHHH--HhhhhhhhcccCCChHHHHHH
Q 001638 919 -ATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVFIAVLVATVGFQVII--VELLGTFATTVPLNWKLWLAS 995 (1039)
Q Consensus 919 -~~~~~~T~~f~~~v~~qv~n~~~~r~~~~~~~f~~~~~n~~f~~~~~~~~~~q~~~--v~~~~~~~~~~~l~~~~w~~~ 995 (1039)
......||.|.+||+...||.+|||+.++.-+..++|.|+||+++++++++.|+++ ++++...|++.||++.+|++.
T Consensus 869 F~~~~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~l~~iFq~~~l~~~ew~~v 948 (972)
T KOG0202|consen 869 FEDMCPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPPLQRIFQTEPLSLAEWLLV 948 (972)
T ss_pred hcccccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheEEEechhhhhheecCCcHHHHHHH
Confidence 11123589999999999999999999876555669999999999999999998765 578999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccCC
Q 001638 996 VVIGAISMPFGVLLKCIPVGT 1016 (1039)
Q Consensus 996 i~~~~~~~~~~~~~k~i~~~~ 1016 (1039)
+.+.+..+++++++|++.+..
T Consensus 949 l~~s~~V~i~dEilK~~~R~~ 969 (972)
T KOG0202|consen 949 LAISSPVIIVDEILKFIARNY 969 (972)
T ss_pred HHHhhhhhhHHHHHHHHHHhc
Confidence 999999999999999998753
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-153 Score=1448.59 Aligned_cols=917 Identities=51% Similarity=0.839 Sum_probs=815.6
Q ss_pred cccccccCCcccCHhHHHhhhcc-CChhHHHHhCCHHHHHHHhCCCCCCCCC--HHHHHHHHhhcCCCccCCCCCCcHHH
Q 001638 86 LSQETLLAGYGIEPDELESIVRS-HNSKAVESRGGVEGLAREVSVSLPDGVA--SEEVSNRQNVYGFNRYAEKPARSFWM 162 (1039)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~~~~~-~~~~~l~~~~gv~~~~~~l~t~~~~GL~--~~~~~~r~~~~G~N~~~~~~~~s~~~ 162 (1039)
.++....+||.+..++++.+.+. ++.+.|+++||++++++.|++|.+.||+ ++|+++|+++||+|+++.++++++|+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~ 88 (941)
T TIGR01517 9 SIRDNFTDGFDVGVSILTDLTDIFKRAPIYEKLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQ 88 (941)
T ss_pred chhhccCCCCCCCHHHHHHhcCchhhHHHHHHhCCHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHH
Confidence 34555678999999999998866 5678899999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHhhHHHHHHHHHHHHHhhccCC-----CCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceE
Q 001638 163 FVWEALHDLTLIILMICAAVSIGVGIP-----TEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIV 237 (1039)
Q Consensus 163 ~~~~~~~~~~~~il~v~a~ls~~~~~~-----~~~~~~~~~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v 237 (1039)
+++++|+++++++|++++++|+++++. .++..+.|++++.|+++++++++++++++|+++++++++++..++.++
T Consensus 89 ~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~ 168 (941)
T TIGR01517 89 IVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKI 168 (941)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCce
Confidence 999999999999999999999998743 234456899999999999999999999999999999999876667899
Q ss_pred EEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCceeEeccCCCCCCCccccCCC-CceeecccEEeeCCeEEE
Q 001638 238 QVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRD-RPFLLSGTKVQDGSGKML 316 (1039)
Q Consensus 238 ~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGEs~pv~k~~~-~~~l~sGt~v~~G~~~~~ 316 (1039)
+|+|||++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.|+.|..+ ++++|+||.|.+|+++++
T Consensus 169 ~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~i 248 (941)
T TIGR01517 169 AVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRML 248 (941)
T ss_pred EEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEE
Confidence 9999999999999999999999999999999999999998889999999999999999754 468999999999999999
Q ss_pred EEEeccchhhHHHHHHhccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHH
Q 001638 317 VTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLN 396 (1039)
Q Consensus 317 V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 396 (1039)
|++||.+|++||+++++.+++ +++|+|++++++++.+.++++.+++++|+++++.++......+. ... ......+..
T Consensus 249 V~~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~ 325 (941)
T TIGR01517 249 VTAVGVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDG-RDT-EEDAQTFLD 325 (941)
T ss_pred EEEeCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc-ccc-chhhHHHHH
Confidence 999999999999999988754 67899999999999999998888888887765544332111000 000 011235677
Q ss_pred HHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccc
Q 001638 397 YFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKT 476 (1039)
Q Consensus 397 ~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~ 476 (1039)
.+..++++++++||||||+++|+++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|++++..+..++
T Consensus 326 ~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~ 405 (941)
T TIGR01517 326 HFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFN 405 (941)
T ss_pred HHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEe
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999987654332
Q ss_pred cccCCcccccCCCCCHHHHHHHHHHHHhccCCceeecCCCCccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCC
Q 001638 477 IKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFN 556 (1039)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~ 556 (1039)
... .....++...+++..++++|+......+..+..+..|||+|.|+++++.+.|.+....+..+++++.+||+
T Consensus 406 ~~~------~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~ 479 (941)
T TIGR01517 406 VRD------VLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFN 479 (941)
T ss_pred cCc------ccccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccC
Confidence 110 11112344555666777777665433232344567899999999999998887776667778889999999
Q ss_pred CCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCC
Q 001638 557 SVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNH 636 (1039)
Q Consensus 557 s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~ 636 (1039)
|++|||+++++.++ +++++++|||||.++++|+++++.+|...++++ .++.+.+.+++|+++|+|++++|||+++.++
T Consensus 480 s~~k~msvv~~~~~-~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~ 557 (941)
T TIGR01517 480 SERKFMSVVVKHSG-GKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEE 557 (941)
T ss_pred CCCCeEEEEEEeCC-CcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCccc
Confidence 99999999998766 678999999999999999998877888888887 7888999999999999999999999986543
Q ss_pred Cc-CCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHH
Q 001638 637 KA-ESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQ 715 (1039)
Q Consensus 637 ~~-~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~ 715 (1039)
.. .+..|+|++|+|+++++||+|||++++|+.|+++||+|+|+|||+..||.+||++|||.+++..+++|+++++++++
T Consensus 558 ~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~ 637 (941)
T TIGR01517 558 FPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYE 637 (941)
T ss_pred cccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHH
Confidence 22 22347899999999999999999999999999999999999999999999999999999888899999999999999
Q ss_pred HHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchH
Q 001638 716 EMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTT 795 (1039)
Q Consensus 716 ~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~ 795 (1039)
+++++++++.||||++|+||.++|+.||++ |++|+|||||+||+|||++||||||||++|+|+||++||++|+||||++
T Consensus 638 el~~~i~~~~Vfar~sPe~K~~iV~~lq~~-g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~ 716 (941)
T TIGR01517 638 EMDPILPKLRVLARSSPLDKQLLVLMLKDM-GEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFAS 716 (941)
T ss_pred HHHHHhccCeEEEECCHHHHHHHHHHHHHC-CCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHH
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHhhHHHHhHhccCCCCccccCCCCC
Q 001638 796 IVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPI 875 (1039)
Q Consensus 796 i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alala~e~p~~~lm~~~P~ 875 (1039)
|++++++||++|+||+|+++|++++|+..+++.+++.++++++|++++|+||+|+++|++|+++|++|+|++++|++||+
T Consensus 717 I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~ 796 (941)
T TIGR01517 717 IVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPI 796 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCC-----CccchhhHHHHHHHHHHHHHHHHHhcccccccc
Q 001638 876 GRNVHFITVTMWRNIIGQSIYQIIVLGVLTFCGKKILKLSGP-----NATLILNTFIFNSFVFCQVFNEINSRDMEKINV 950 (1039)
Q Consensus 876 ~~~~~li~~~~~~~i~~~~i~q~~v~~~l~~~~~~~~~~~~~-----~~~~~~~T~~f~~~v~~qv~n~~~~r~~~~~~~ 950 (1039)
+++++++++.||++++++++||+++.+++++.+..++...+. ......+|++|++|+++|+||.+|+|+....++
T Consensus 797 ~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~ 876 (941)
T TIGR01517 797 GRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNV 876 (941)
T ss_pred CCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccc
Confidence 999999999999999999999998888777766555544331 123467899999999999999999998765588
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHhhhhhhhcccCCChHHHHHHHHHHHHHHHHHHHHhhhcc
Q 001638 951 FRGIFSSWVFIAVLVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPV 1014 (1039)
Q Consensus 951 f~~~~~n~~f~~~~~~~~~~q~~~v~~~~~~~~~~~l~~~~w~~~i~~~~~~~~~~~~~k~i~~ 1014 (1039)
|+++++|++|+.++++++++|++++++++.+|++.||++.+|++|++++++.+++.++.|++|.
T Consensus 877 ~~~~~~n~~~~~~~~~~~~l~~~~~~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~ 940 (941)
T TIGR01517 877 FEGLFKNRIFVTIMGFTFGFQVIIVEFGGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLIPV 940 (941)
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999999999999999999999999985
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-143 Score=1361.32 Aligned_cols=864 Identities=25% Similarity=0.403 Sum_probs=736.1
Q ss_pred CHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCccc
Q 001638 119 GVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVY 198 (1039)
Q Consensus 119 gv~~~~~~l~t~~~~GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~ 198 (1039)
.++.+++.|+|+...||+++|+++|+++||+|+++.++++|+|..++++|.++++++|++++++|++++ .|+
T Consensus 11 ~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~--------~~~ 82 (1053)
T TIGR01523 11 IADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH--------DWI 82 (1053)
T ss_pred CHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh--------hHH
Confidence 678889999999989999999999999999999999999999999999999999999999999999876 689
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCc
Q 001638 199 DGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYS 278 (1039)
Q Consensus 199 d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~ 278 (1039)
+++.|++.+++..+++.+++|+.++..++|.+. .+.+++|+|||++++|+++||||||||.|++||+|||||+|+++++
T Consensus 83 ~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l-~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~ 161 (1053)
T TIGR01523 83 EGGVISAIIALNILIGFIQEYKAEKTMDSLKNL-ASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKN 161 (1053)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCc
Confidence 999999999999999999999999999999975 4568999999999999999999999999999999999999999999
Q ss_pred eeEeccCCCCCCCccccCC--------------CCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCC------
Q 001638 279 LTIDESSLSGETEPVHINR--------------DRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGE------ 338 (1039)
Q Consensus 279 l~VDES~LTGEs~pv~k~~--------------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~------ 338 (1039)
|.||||+|||||.|+.|.. ..+++|+||.|.+|+++++|++||++|+.|||.+++.+...
T Consensus 162 L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~~~~ 241 (1053)
T TIGR01523 162 FDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPE 241 (1053)
T ss_pred eEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhcccccc
Confidence 9999999999999999963 13679999999999999999999999999999998865321
Q ss_pred -----------------------------CCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchh
Q 001638 339 -----------------------------DETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSI 389 (1039)
Q Consensus 339 -----------------------------~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~ 389 (1039)
.+||||+++++++.++..+++++++++|++.... +
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~-------------~--- 305 (1053)
T TIGR01523 242 KDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFD-------------V--- 305 (1053)
T ss_pred ccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------------h---
Confidence 2599999999999998888777776665432100 0
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEE
Q 001638 390 DAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLW 469 (1039)
Q Consensus 390 ~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~ 469 (1039)
....+..+++++++++|||||+.++++++++++||+++|++||+++++|+||++|+||+|||||||+|+|+|+++|
T Consensus 306 ----~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~ 381 (1053)
T TIGR01523 306 ----DKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIW 381 (1053)
T ss_pred ----hHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEE
Confidence 1245667899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCc-ccccccC-----Cc------------------c---ccc-------------CCCCCHHHHHHHHHHHHhccCCc
Q 001638 470 ICNE-AKTIKSG-----DN------------------E---KLL-------------KPSVSDAVFNIFLQSIFQNTGSE 509 (1039)
Q Consensus 470 ~~~~-~~~~~~~-----~~------------------~---~~~-------------~~~~~~~~~~~l~~~~~~~~~~~ 509 (1039)
..+. .+..... .. . ... .....+.....++.....|+.+.
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~ 461 (1053)
T TIGR01523 382 IPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIAT 461 (1053)
T ss_pred EcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCe
Confidence 7641 1111100 00 0 000 00000112233444444555554
Q ss_pred eeec-CCCCccccCCchHHHHHHHHHHhCCCcc------cc-------------------cccccEEEEecCCCCCCceE
Q 001638 510 VVKD-KDGRTNILGTPTERAILEFGLILGGDST------FH-------------------REESAIVKVEPFNSVKKRMS 563 (1039)
Q Consensus 510 ~~~~-~~~~~~~~g~p~e~All~~a~~~g~~~~------~~-------------------~~~~~il~~~pF~s~rkrms 563 (1039)
...+ .++.+...|||+|.||+.++.+.|.+.. .. +.++++++.+||||+||||+
T Consensus 462 ~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~ms 541 (1053)
T TIGR01523 462 VFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMA 541 (1053)
T ss_pred eeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEE
Confidence 4322 2334456799999999999998887431 11 23578999999999999999
Q ss_pred EEEEcCCCCeEEEEEeCcHHHHHhhhhhhhccCC-ccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCC-----
Q 001638 564 VLVSLPNNGGFRVFCKGASEIILNMCDKIINADG-KAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHK----- 637 (1039)
Q Consensus 564 vvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~----- 637 (1039)
++++.++++.+++|+|||||.|+++|+++...+| +..+++++.++.+.+.+++|+++|+||+++|||+++..+.
T Consensus 542 vv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~ 621 (1053)
T TIGR01523 542 SIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQL 621 (1053)
T ss_pred EEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhh
Confidence 9998764245889999999999999998766555 5679999999999999999999999999999999865321
Q ss_pred -----cCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCC----------CCc
Q 001638 638 -----AESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTD----------GGL 702 (1039)
Q Consensus 638 -----~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~----------~~~ 702 (1039)
..+..|+|++|+|+++++||+|||++++|+.|+++||+|+|+|||+..||.+||++|||..+ ...
T Consensus 622 ~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~ 701 (1053)
T TIGR01523 622 KNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSM 701 (1053)
T ss_pred hccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccce
Confidence 11246889999999999999999999999999999999999999999999999999999754 357
Q ss_pred eeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHh
Q 001638 703 AIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKE 782 (1039)
Q Consensus 703 vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~ 782 (1039)
+++|.+++.++++++++.+.+..||||++|+||.++|+.+|+. |++|+|||||+||+|||++||||||||++|+++||+
T Consensus 702 vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~-g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~ 780 (1053)
T TIGR01523 702 VMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRR-KAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKD 780 (1053)
T ss_pred eeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhc-CCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHH
Confidence 9999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred ccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---C--CCchHHHHHHHHHHHhhHHHH
Q 001638 783 NADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACIT---G--SAPLTAVQLLWVNMIMDTLGA 857 (1039)
Q Consensus 783 ~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~---~--~~pl~~~qll~vnli~d~l~a 857 (1039)
+||++|+||||++|++++++||++|+||+|+++|+++.|+..+++.+++.++. | +.||+++|+||+|+++|.+|+
T Consensus 781 aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~pa 860 (1053)
T TIGR01523 781 ASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPA 860 (1053)
T ss_pred hcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888874 2 479999999999999999999
Q ss_pred hHhccCCCCccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH---hccc--c--cccC---CC--CccchhhH
Q 001638 858 LALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIVLGVLTF---CGKK--I--LKLS---GP--NATLILNT 925 (1039)
Q Consensus 858 lala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~i~q~~v~~~l~~---~~~~--~--~~~~---~~--~~~~~~~T 925 (1039)
++|++|||++++|+|||+.++++++++.+|+.++.++++++++.+..++ ++.. . ..++ +. ......+|
T Consensus 861 laL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t 940 (1053)
T TIGR01523 861 MGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARS 940 (1053)
T ss_pred HhhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhHH
Confidence 9999999999999999999999999999999999889887765544332 1100 0 0000 00 11235689
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccc----------------ccchhHHHHHHHHHHHHHHHHH--Hhhhhh-hhcccC
Q 001638 926 FIFNSFVFCQVFNEINSRDMEKINVFR----------------GIFSSWVFIAVLVATVGFQVII--VELLGT-FATTVP 986 (1039)
Q Consensus 926 ~~f~~~v~~qv~n~~~~r~~~~~~~f~----------------~~~~n~~f~~~~~~~~~~q~~~--v~~~~~-~~~~~~ 986 (1039)
+.|.+++++|++|.+|+|+.+ .++|+ +.++|+++++++++++++|+++ +|+++. +|++.|
T Consensus 941 ~~f~~l~~~~~~~~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~~f~~~~ 1019 (1053)
T TIGR01523 941 AAFATMTFCALILAVEVKDFD-NSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVINDDVFKHKP 1019 (1053)
T ss_pred HHHHHHHHHHHHHHHHHhcCc-hhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCC
Confidence 999999999999999999874 23332 4679999888888888887654 567875 999999
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhhhcc
Q 001638 987 LNWKLWLASVVIGAISMPFGVLLKCIPV 1014 (1039)
Q Consensus 987 l~~~~w~~~i~~~~~~~~~~~~~k~i~~ 1014 (1039)
+++ +|+++++++++.+++.++.|++..
T Consensus 1020 l~~-~w~~~~~~~~~~~~~~e~~K~~~r 1046 (1053)
T TIGR01523 1020 IGA-EWGLAAAATIAFFFGAEIWKCGKR 1046 (1053)
T ss_pred cch-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 997 899999999999999999998864
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-141 Score=1333.87 Aligned_cols=846 Identities=32% Similarity=0.515 Sum_probs=745.7
Q ss_pred CHHHHHHHhCCCCCCCCC-HHHHHHHHhhcCCCccCCCCCCcHHHHHHHHH-hhHHHHHHHHHHHHHhhccCCCCCCCCc
Q 001638 119 GVEGLAREVSVSLPDGVA-SEEVSNRQNVYGFNRYAEKPARSFWMFVWEAL-HDLTLIILMICAAVSIGVGIPTEGWPDG 196 (1039)
Q Consensus 119 gv~~~~~~l~t~~~~GL~-~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~-~~~~~~il~v~a~ls~~~~~~~~~~~~~ 196 (1039)
.++++++.|++|..+||+ ++|+++|+++||.|+++.++++++|++++++| +++++++|++++++|++++ .
T Consensus 8 ~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g--------~ 79 (884)
T TIGR01522 8 SVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG--------N 79 (884)
T ss_pred CHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc--------c
Confidence 788999999999999999 88999999999999999999999999999999 9999999999999999886 5
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEee
Q 001638 197 VYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISG 276 (1039)
Q Consensus 197 ~~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g 276 (1039)
|.+++.|++++++++.++.+++|+.++..+++.+. .+.+++|+|||++++|+++||||||+|.|++||+|||||++++|
T Consensus 80 ~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l-~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g 158 (884)
T TIGR01522 80 IDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKL-VPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEA 158 (884)
T ss_pred hhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEc
Confidence 88899998888888999999999999999998874 45689999999999999999999999999999999999999999
Q ss_pred CceeEeccCCCCCCCccccCCC-------------CceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCCCch
Q 001638 277 YSLTIDESSLSGETEPVHINRD-------------RPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPL 343 (1039)
Q Consensus 277 ~~l~VDES~LTGEs~pv~k~~~-------------~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tpl 343 (1039)
+++.||||+|||||.|+.|..+ ++++|+||.|.+|+++++|++||.+|++|++.+++++...+++|+
T Consensus 159 ~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~kt~l 238 (884)
T TIGR01522 159 VDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPL 238 (884)
T ss_pred CceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCCCcH
Confidence 8889999999999999999754 258999999999999999999999999999999999888889999
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHH
Q 001638 344 QVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAF 423 (1039)
Q Consensus 344 q~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~ 423 (1039)
|+.+++++.++..++++++++++++. ++.+ ..+...+..++++++++||||||+++|+++++
T Consensus 239 q~~l~~l~~~~~~~~~~~~~~~~~~~---~~~~---------------~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~ 300 (884)
T TIGR01522 239 QKSMDLLGKQLSLVSFGVIGVICLVG---WFQG---------------KDWLEMFTISVSLAVAAIPEGLPIIVTVTLAL 300 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HHhc---------------CCHHHHHHHHHHHHHHHccchHHHHHHHHHHH
Confidence 99999999998877665544433321 2110 12346788899999999999999999999999
Q ss_pred HHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccc-ccc---CCcc------cccCCCCCHH
Q 001638 424 AMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKT-IKS---GDNE------KLLKPSVSDA 493 (1039)
Q Consensus 424 ~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~-~~~---~~~~------~~~~~~~~~~ 493 (1039)
++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..+. ... .... .......++.
T Consensus 301 ~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (884)
T TIGR01522 301 GVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVA 380 (884)
T ss_pred HHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHH
Confidence 99999999999999999999999999999999999999999999987654211 000 0000 0000111223
Q ss_pred HHHHHHHHHHhccCCceeecCCCCccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEEcCCCCe
Q 001638 494 VFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGG 573 (1039)
Q Consensus 494 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~ 573 (1039)
..+++..+ +.|+++.... . .....|||+|.|+++++.+.|.+ ..+..++.++.+||+|+||||+++++...+++
T Consensus 381 ~~~~l~~~-~l~~~~~~~~-~--~~~~~g~p~e~All~~~~~~~~~--~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~ 454 (884)
T TIGR01522 381 VSRILEAG-NLCNNAKFRN-E--ADTLLGNPTDVALIELLMKFGLD--DLRETYIRVAEVPFSSERKWMAVKCVHRQDRS 454 (884)
T ss_pred HHHHHHHH-hhhCCCeecC-C--CCCcCCChHHHHHHHHHHHcCcH--hHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCe
Confidence 33344333 3344333211 1 12456899999999999887653 34456889999999999999999988654378
Q ss_pred EEEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeec
Q 001638 574 FRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVG 653 (1039)
Q Consensus 574 ~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~ 653 (1039)
+++++|||||.|+.+|++++..+|...+++++.++++.+.+++|+++|+|++++||+++ +.+++|+|+++
T Consensus 455 ~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~----------~~~l~~lGli~ 524 (884)
T TIGR01522 455 EMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE----------KGQLTFLGLVG 524 (884)
T ss_pred EEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC----------CCCeEEEEEEe
Confidence 89999999999999999998878888899999999999999999999999999999875 35799999999
Q ss_pred ccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChh
Q 001638 654 IKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPT 733 (1039)
Q Consensus 654 i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~ 733 (1039)
++||+|||++++|+.|+++||+++|+|||+..||.++|+++||......+++|++++.++++++++.+++..||||++|+
T Consensus 525 l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~ 604 (884)
T TIGR01522 525 INDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPE 604 (884)
T ss_pred ccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHH
Confidence 99999999999999999999999999999999999999999999877889999999999999999999999999999999
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHH
Q 001638 734 DKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKF 813 (1039)
Q Consensus 734 ~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~ 813 (1039)
||.++|+.+|+. |++|+|||||+||+|||++||||||||.+|+++++++||++++||||++|++++++||++|+||+|+
T Consensus 605 ~K~~iv~~lq~~-g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~ 683 (884)
T TIGR01522 605 HKMKIVKALQKR-GDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNF 683 (884)
T ss_pred HHHHHHHHHHHC-CCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999998899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHhhHHHHhHhccCCCCccccCCCCCCCCCCcchHHHHHHHHHH
Q 001638 814 VQFQLTVNIVALVINFVAACITGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQ 893 (1039)
Q Consensus 814 i~f~l~~Ni~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~ 893 (1039)
++|+++.|+..+.+.+++.++..+.||+++|+||+|+++|.+|+++|++|||++++|+|||++++++++++.||++++.+
T Consensus 684 i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~ 763 (884)
T TIGR01522 684 ITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVS 763 (884)
T ss_pred HHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHH
Confidence 99999999999999888899889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccccCCCCccchhhHHHHHHHHHHHHHHHHHhcccccccccc-ccchhHHHHHHHHHHHHHHH
Q 001638 894 SIYQIIVLGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFR-GIFSSWVFIAVLVATVGFQV 972 (1039)
Q Consensus 894 ~i~q~~v~~~l~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~qv~n~~~~r~~~~~~~f~-~~~~n~~f~~~~~~~~~~q~ 972 (1039)
+++++++.+++++.. +.. + .....++|++|++|++||+||.+|+|+. +.++|+ ++++|++|++++++++++|+
T Consensus 764 g~~~~~~~~~~~~~~--~~~--~-~~~~~~~t~~f~~~v~~q~~~~~~~r~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~ 837 (884)
T TIGR01522 764 AIIIVVGTLFVFVRE--MQD--G-VITARDTTMTFTCFVFFDMFNALACRSQ-TKSVFEIGFFSNRMFNYAVGGSIIGQL 837 (884)
T ss_pred HHHHHHHHHHHHHHH--HcC--C-cchhhHHHHHHHHHHHHHHHHHHHHccC-CccccccCcccCHHHHHHHHHHHHHHH
Confidence 999887765544321 111 1 1223568999999999999999999995 568887 78999999999999999998
Q ss_pred HHH--hhhhhhhcccCCChHHHHHHHHHHHHHHHHHHHHhhhcc
Q 001638 973 IIV--ELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPV 1014 (1039)
Q Consensus 973 ~~v--~~~~~~~~~~~l~~~~w~~~i~~~~~~~~~~~~~k~i~~ 1014 (1039)
+++ ++++.+|++.||++.+|++|++++++.+++.++.|++..
T Consensus 838 ~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~ 881 (884)
T TIGR01522 838 LVIYFPPLQSVFQTEALSIKDLLFLLLITSSVCIVDEIRKKVER 881 (884)
T ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 776 578999999999999999999999999999999998764
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-140 Score=1338.89 Aligned_cols=874 Identities=26% Similarity=0.393 Sum_probs=736.9
Q ss_pred CHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCC-----CC
Q 001638 119 GVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPTE-----GW 193 (1039)
Q Consensus 119 gv~~~~~~l~t~~~~GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~~~~~-----~~ 193 (1039)
.++++.+.|+|+..+||+++|+++|+++||+|+++.++++++|+.++++|.++++++|++++++++++..... +.
T Consensus 21 ~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~ 100 (997)
T TIGR01106 21 SLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQ 100 (997)
T ss_pred CHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 6788899999999999999999999999999999999999999999999999999999999999876532211 11
Q ss_pred CCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEE
Q 001638 194 PDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGIL 273 (1039)
Q Consensus 194 ~~~~~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgil 273 (1039)
...|++++.+++.+++..+++.+++++.++..+++.+. .+.+++|+|||++++|+++||||||+|.|++||+|||||++
T Consensus 101 ~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~-~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~i 179 (997)
T TIGR01106 101 NDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNM-VPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRI 179 (997)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEE
Confidence 24688888766666666666666666666666666653 45689999999999999999999999999999999999999
Q ss_pred EeeCceeEeccCCCCCCCccccCCCC---------ceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCCCchH
Q 001638 274 ISGYSLTIDESSLSGETEPVHINRDR---------PFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQ 344 (1039)
Q Consensus 274 l~g~~l~VDES~LTGEs~pv~k~~~~---------~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq 344 (1039)
++|++|.||||+|||||.|+.|..++ +++|+||.|.+|+++++|++||.+|+.|++.+.+.+.+.+++|+|
T Consensus 180 l~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~pl~ 259 (997)
T TIGR01106 180 ISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGKTPIA 259 (997)
T ss_pred EEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCCCcHH
Confidence 99998999999999999999997543 479999999999999999999999999999999988788899999
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHH
Q 001638 345 VKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFA 424 (1039)
Q Consensus 345 ~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~ 424 (1039)
+++++++..+..+++++++++++++.. .+ ..+...+..++++++++||||||++++++++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---------------~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~ 321 (997)
T TIGR01106 260 IEIEHFIHIITGVAVFLGVSFFILSLI---LG---------------YTWLEAVIFLIGIIVANVPEGLLATVTVCLTLT 321 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH---hc---------------CCHHHHHHHHHHHHhhcCCccchHHHHHHHHHH
Confidence 999999999988887777666554321 11 122356777899999999999999999999999
Q ss_pred HHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHHHHHHHh
Q 001638 425 MKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQ 504 (1039)
Q Consensus 425 ~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 504 (1039)
+++|+++|++||+++++|+||++|+||||||||||+|+|+|.++|+++..+....................+.+...++.
T Consensus 322 ~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~al 401 (997)
T TIGR01106 322 AKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGL 401 (997)
T ss_pred HHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999987765432111000000000111233344555566
Q ss_pred ccCCceeecCCC----CccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEEcC--CCCeEEEEE
Q 001638 505 NTGSEVVKDKDG----RTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLP--NNGGFRVFC 578 (1039)
Q Consensus 505 ~~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~--~~~~~~~~~ 578 (1039)
|+++....+.++ ..+..|||+|.||++++.+.+.+....++.+++++.+||||+||||+++++.. +++.+++|+
T Consensus 402 cn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~ 481 (997)
T TIGR01106 402 CNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVM 481 (997)
T ss_pred cCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEE
Confidence 665544322222 23567999999999999877766667778899999999999999999988643 225688999
Q ss_pred eCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCc---------CCCCCCCcEee
Q 001638 579 KGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKA---------ESIPENNYTLI 649 (1039)
Q Consensus 579 KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~---------~~~~e~~l~~l 649 (1039)
|||||.|+++|++++ .+|+..+++++.++.+.+.+++|+++|+||+++|||+++.++.. .+..|+|++|+
T Consensus 482 KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~fl 560 (997)
T TIGR01106 482 KGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFV 560 (997)
T ss_pred eCChHHHHHHhhHHh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEE
Confidence 999999999999886 57888999999999999999999999999999999998643211 11238899999
Q ss_pred eeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCC------------------------Cceee
Q 001638 650 AVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG------------------------GLAIE 705 (1039)
Q Consensus 650 G~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~------------------------~~vi~ 705 (1039)
|+++++||+|||++++|++|+++||+|+|+|||+..||.++|+++||..++ ..+++
T Consensus 561 Gli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~ 640 (997)
T TIGR01106 561 GLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVH 640 (997)
T ss_pred EEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEE
Confidence 999999999999999999999999999999999999999999999997542 26999
Q ss_pred CcccccCCHHHHHhhcccce--EEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhc
Q 001638 706 GTDFRSKNPQEMQELIPKLQ--VMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKEN 783 (1039)
Q Consensus 706 G~~~~~~~~~~~~~~~~~~~--v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~ 783 (1039)
|.+++.++++++++.++++. ||||++|+||.++|+.+|+. |++|+|+|||+||+|||++||||||||++|+|+||++
T Consensus 641 G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~a 719 (997)
T TIGR01106 641 GSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQA 719 (997)
T ss_pred hHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHh
Confidence 99999999999999998764 99999999999999999998 9999999999999999999999999998999999999
Q ss_pred cCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHhhHHHHhHhccC
Q 001638 784 ADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAVQLLWVNMIMDTLGALALATE 863 (1039)
Q Consensus 784 aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alala~e 863 (1039)
||++|+||||++|+++++|||++|+||+|+++|+++.|+..+++.++++++..++||+++|+||+|+++|++|+++|++|
T Consensus 720 ADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e 799 (997)
T TIGR01106 720 ADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYE 799 (997)
T ss_pred hceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCCCCC-CCCcchHHHHHHHH-HHHHHHHHHHHHHHHhcc--------ccccc---------CC---CC---
Q 001638 864 PPHEGLMQRPPIGR-NVHFITVTMWRNII-GQSIYQIIVLGVLTFCGK--------KILKL---------SG---PN--- 918 (1039)
Q Consensus 864 ~p~~~lm~~~P~~~-~~~li~~~~~~~i~-~~~i~q~~v~~~l~~~~~--------~~~~~---------~~---~~--- 918 (1039)
||++++|+|||+.+ .++++++.+|..++ ..+++|+++.++.++... .++.+ ++ ..
T Consensus 800 ~~~~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (997)
T TIGR01106 800 KAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQE 879 (997)
T ss_pred CCCcccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccc
Confidence 99999999999984 78999998876543 345566554443332211 11111 00 00
Q ss_pred --------ccchhhHHHHHHHHHHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHHH--HhhhhhhhcccCCC
Q 001638 919 --------ATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVFIAVLVATVGFQVII--VELLGTFATTVPLN 988 (1039)
Q Consensus 919 --------~~~~~~T~~f~~~v~~qv~n~~~~r~~~~~~~f~~~~~n~~f~~~~~~~~~~q~~~--v~~~~~~~~~~~l~ 988 (1039)
.....+|++|++++++|+||.+|||+. +.++|+..++|++++.++++.+++++++ +++++.+|++.|++
T Consensus 880 ~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~-~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~ 958 (997)
T TIGR01106 880 WTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTR-RNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLK 958 (997)
T ss_pred cchhcccchhhhhhHHHHHHHHHHHHHHHHHhccC-cccccccCCcCHHHHHHHHHHHHHHHHHHHhhhhHHHhccccCC
Confidence 001468999999999999999999995 6688875589999988888877777554 56789999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhcc
Q 001638 989 WKLWLASVVIGAISMPFGVLLKCIPV 1014 (1039)
Q Consensus 989 ~~~w~~~i~~~~~~~~~~~~~k~i~~ 1014 (1039)
+.+|+++++++++.+++.++.|++..
T Consensus 959 ~~~w~~~~~~~~~~~~~~~~~k~~~r 984 (997)
T TIGR01106 959 PTWWFCAFPYSLLIFVYDEIRKLIIR 984 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998774
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-138 Score=1300.07 Aligned_cols=842 Identities=36% Similarity=0.532 Sum_probs=735.8
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCcccchh
Q 001638 122 GLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVYDGL 201 (1039)
Q Consensus 122 ~~~~~l~t~~~~GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~d~~ 201 (1039)
.+...+.++...||+.+|+.+|++.||+|++++.+.+++|..++.+|.++++++|++++++|+.++....+. .+..
T Consensus 32 ~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~----~~~~ 107 (917)
T COG0474 32 ELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAG----VDAI 107 (917)
T ss_pred hHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC----ccee
Confidence 456677888899999999999999999999999999999999999999999999999999999987422110 4555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCceeE
Q 001638 202 GIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTI 281 (1039)
Q Consensus 202 ~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~V 281 (1039)
.|+..+++..++..+++|+.++..+++.+.. +.+++|+|||++++|+++||||||||.|++||+||||++++++++++|
T Consensus 108 ~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~-~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l~V 186 (917)
T COG0474 108 VILLVVVINALLGFVQEYRAEKALEALKKMS-SPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEV 186 (917)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecCceE
Confidence 6777777888888999999999998888755 679999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCCCccccC-------------CCCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCCCchHHHHh
Q 001638 282 DESSLSGETEPVHIN-------------RDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLN 348 (1039)
Q Consensus 282 DES~LTGEs~pv~k~-------------~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~ 348 (1039)
|||+|||||.|+.|. ..++++|+||.|.+|++.++|++||.+|+.|++...+......+||+|++++
T Consensus 187 dEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~l~ 266 (917)
T COG0474 187 DESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKLN 266 (917)
T ss_pred EcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHHHH
Confidence 999999999999996 4478999999999999999999999999999999999987688999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHh
Q 001638 349 GVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKL 428 (1039)
Q Consensus 349 ~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m 428 (1039)
++...+..++++.++++|++.. +.+ ...+...|..++++++.++|+|||+.++++++.++.+|
T Consensus 267 ~~~~~l~~~~l~~~~~~~~~~~---~~~--------------~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~m 329 (917)
T COG0474 267 KLGKFLLVLALVLGALVFVVGL---FRG--------------GNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRM 329 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---Hhc--------------CccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHH
Confidence 9999999988888777776541 110 01145788999999999999999999999999999999
Q ss_pred hccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHHHHHHHhccCC
Q 001638 429 MNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGS 508 (1039)
Q Consensus 429 ~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 508 (1039)
.+++++||+++++|+||++++||||||||||+|+|+|++++..+...+. + ......++... .++..+++|++.
T Consensus 330 ak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~---~---~~~~~~~~~~~-~~l~~~~lc~~~ 402 (917)
T COG0474 330 AKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDI---D---DKDLKDSPALL-RFLLAAALCNSV 402 (917)
T ss_pred HhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccc---c---ccccccchHHH-HHHHHHHhcCcc
Confidence 9999999999999999999999999999999999999999998511100 1 00111122222 334445566665
Q ss_pred ceeecCCCCccccCCchHHHHHHHHHHhCC--CcccccccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHH
Q 001638 509 EVVKDKDGRTNILGTPTERAILEFGLILGG--DSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIIL 586 (1039)
Q Consensus 509 ~~~~~~~~~~~~~g~p~e~All~~a~~~g~--~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il 586 (1039)
....+ + ++..|||+|.||++++.+.|. +....+.++++++.+||||+||||+++++..+ +++.+++|||||.|+
T Consensus 403 ~~~~~-~--~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~-~~~~~~~KGApe~il 478 (917)
T COG0474 403 TPEKN-G--WYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDE-GKYILFVKGAPEVIL 478 (917)
T ss_pred ccccc-C--ceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCC-CcEEEEEcCChHHHH
Confidence 54433 3 788999999999999999998 77777888899999999999999999999665 669999999999999
Q ss_pred hhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCcC--CCCCCCcEeeeeecccCCCCccHHH
Q 001638 587 NMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAE--SIPENNYTLIAVVGIKDPVRPGVRE 664 (1039)
Q Consensus 587 ~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~--~~~e~~l~~lG~v~i~D~lR~~v~~ 664 (1039)
++|++. |...+++++.++.+.+..++|+++|||++++|||.++..+... +..|+|++|+|+++|+||||+|+++
T Consensus 479 ~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~ 554 (917)
T COG0474 479 ERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKE 554 (917)
T ss_pred HHhccc----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHH
Confidence 999986 6778899999999999999999999999999999776554321 4689999999999999999999999
Q ss_pred HHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCC--ceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHH
Q 001638 665 AVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGG--LAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQL 742 (1039)
Q Consensus 665 aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~--~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l 742 (1039)
+|+.|++|||+|||+||||+.||++||++|||..+.. .+++|.+++.++++|+.+.+.++.||||+||+||.++|+.|
T Consensus 555 aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~l 634 (917)
T COG0474 555 AIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEAL 634 (917)
T ss_pred HHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999998774 59999999999999999999999999999999999999999
Q ss_pred hhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 001638 743 RNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNI 822 (1039)
Q Consensus 743 ~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni 822 (1039)
|+. |++|+|||||+||+||||+||||||||++|+|+||++||++++||||.+|+.+++|||++|.||+|+++|.++.|+
T Consensus 635 q~~-g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~ 713 (917)
T COG0474 635 QKS-GHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNV 713 (917)
T ss_pred HhC-CCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCC-CchHHHHHHHHHHHhhHHHHhHhccCCCCccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 001638 823 VALVINFVAACITGS-APLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIVL 901 (1039)
Q Consensus 823 ~~i~~~~~~~~~~~~-~pl~~~qll~vnli~d~l~alala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~i~q~~v~ 901 (1039)
..+++.+++.+++.+ .|++++|+||+|+++|++|+++|+.++|+.+.|++||++++++++++..+..++.+..++.+++
T Consensus 714 ~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~ 793 (917)
T COG0474 714 GEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAIL 793 (917)
T ss_pred HHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHH
Confidence 999999999888877 9999999999999999999999999999999999999999999999988888777777777776
Q ss_pred HHHHHhcccccccCC---CC-ccchhhHHHHHHHHHHHHHHHHHhcccccccccc-ccchhHHHHHHHHHHHHHHHHHH-
Q 001638 902 GVLTFCGKKILKLSG---PN-ATLILNTFIFNSFVFCQVFNEINSRDMEKINVFR-GIFSSWVFIAVLVATVGFQVIIV- 975 (1039)
Q Consensus 902 ~~l~~~~~~~~~~~~---~~-~~~~~~T~~f~~~v~~qv~n~~~~r~~~~~~~f~-~~~~n~~f~~~~~~~~~~q~~~v- 975 (1039)
.++.|....+..... .. ......|+.|++++++|.++.+++|.. +.++|. +++.|+.++++++++++++++++
T Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~ 872 (917)
T COG0474 794 FILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSR-GRPFLSSLLFSNKYLWLALLVIIILQLLIIF 872 (917)
T ss_pred HHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhhcccccCHHHHHHHHHHHHHHHHHHH
Confidence 665554433222111 11 145678999999999999999999986 345555 46799999999998888887765
Q ss_pred -hhhh-hhhcccCCChHHHHHHHHHHHHH
Q 001638 976 -ELLG-TFATTVPLNWKLWLASVVIGAIS 1002 (1039)
Q Consensus 976 -~~~~-~~~~~~~l~~~~w~~~i~~~~~~ 1002 (1039)
++.. ..|++.|+++.+|++++......
T Consensus 873 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 901 (917)
T COG0474 873 LPPLNLKIFQPTPLSLFEWLIAIAVALLL 901 (917)
T ss_pred hHHhHhhhccCCCCcHHHHHHHHHHHHHH
Confidence 3445 68899999999999988887444
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-135 Score=1271.34 Aligned_cols=829 Identities=23% Similarity=0.348 Sum_probs=702.4
Q ss_pred CHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhccCCC---CCCCC
Q 001638 119 GVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPT---EGWPD 195 (1039)
Q Consensus 119 gv~~~~~~l~t~~~~GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~~~~---~~~~~ 195 (1039)
..+.+.+.|+++ .+||+++|+++|+++||+|+++.++++++|..++++|+++++++|++++++|++++... .+...
T Consensus 31 ~~~~v~~~l~~~-~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~ 109 (903)
T PRK15122 31 SLEETLANLNTH-RQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEET 109 (903)
T ss_pred CHHHHHHHhCCC-CCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccc
Confidence 567778888998 47999999999999999999999999999999999999999999999999999886532 12224
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeC------CeEEEEEcCCcccCcEEEEcCCCcccc
Q 001638 196 GVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRD------GYRKKLSIYDLVVGDIVHLSIGDQVPA 269 (1039)
Q Consensus 196 ~~~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~------G~~~~I~~~dLvvGDIV~l~~Gd~VPa 269 (1039)
.|.+++.|++.+++..+++.+++|+.++..++|.+.. +..++|+|| |++++|+++||||||+|.|++||+|||
T Consensus 110 ~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~-~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPa 188 (903)
T PRK15122 110 DLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMV-RTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPA 188 (903)
T ss_pred cHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEee
Confidence 6899999999899999999999999999999998754 467999999 489999999999999999999999999
Q ss_pred cEEEEeeCceeEeccCCCCCCCccccCC----------------------CCceeecccEEeeCCeEEEEEEeccchhhH
Q 001638 270 DGILISGYSLTIDESSLSGETEPVHINR----------------------DRPFLLSGTKVQDGSGKMLVTSVGMRTEWG 327 (1039)
Q Consensus 270 Dgill~g~~l~VDES~LTGEs~pv~k~~----------------------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g 327 (1039)
||++++|++|.||||+|||||.|+.|.. .++++|+||.|.+|+++++|++||.+|++|
T Consensus 189 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~~g 268 (903)
T PRK15122 189 DVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFG 268 (903)
T ss_pred eEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccHhh
Confidence 9999999999999999999999999974 136899999999999999999999999999
Q ss_pred HHHHHhccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHh
Q 001638 328 RLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVV 407 (1039)
Q Consensus 328 ki~~~~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvv 407 (1039)
+|.+++.+ ...++|+|++++++++.+..+++.++.+++++.. +. ...+...+..+++++++
T Consensus 269 kI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~---~~---------------~~~~~~~l~~aisl~V~ 329 (903)
T PRK15122 269 SLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLING---FT---------------KGDWLEALLFALAVAVG 329 (903)
T ss_pred HHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhh---hc---------------cCCHHHHHHHHHHHHHH
Confidence 99999887 6678999999999999888877665554443321 11 01234677889999999
Q ss_pred hhcCchhHHHHHHHHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccC
Q 001638 408 AVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLK 487 (1039)
Q Consensus 408 avP~~Lplavtl~la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~ 487 (1039)
+||||||++++++++.++.+|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+.. .
T Consensus 330 ~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~-------~----- 397 (903)
T PRK15122 330 LTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR-------K----- 397 (903)
T ss_pred HccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC-------C-----
Confidence 9999999999999999999999999999999999999999999999999999999999997642211 0
Q ss_pred CCCCHHHHHHHHHHHHhccCCceeecCCCCccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEE
Q 001638 488 PSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVS 567 (1039)
Q Consensus 488 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~ 567 (1039)
.++.+ .. .+.|+.. ....|||+|.|+++++.+.+.+ ..+..++.++.+||+|.+|+|+++++
T Consensus 398 ---~~~~l---~~-a~l~s~~---------~~~~~~p~e~All~~a~~~~~~--~~~~~~~~~~~~pF~s~~k~ms~v~~ 459 (903)
T PRK15122 398 ---DERVL---QL-AWLNSFH---------QSGMKNLMDQAVVAFAEGNPEI--VKPAGYRKVDELPFDFVRRRLSVVVE 459 (903)
T ss_pred ---hHHHH---HH-HHHhCCC---------CCCCCChHHHHHHHHHHHcCch--hhhhcCceEEEeeeCCCcCEEEEEEE
Confidence 11222 21 2223211 0125899999999999876643 23456788999999999999999998
Q ss_pred cCCCCeEEEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCc---CCCCCC
Q 001638 568 LPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKA---ESIPEN 644 (1039)
Q Consensus 568 ~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~---~~~~e~ 644 (1039)
..+ +++++++|||||.++++|+++.. +|...+++++.++++.+.+++++++|+|++++|||+++.++.. .+..|+
T Consensus 460 ~~~-~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~ 537 (903)
T PRK15122 460 DAQ-GQHLLICKGAVEEMLAVATHVRD-GDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADER 537 (903)
T ss_pred cCC-CcEEEEECCcHHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCcccccccccccccc
Confidence 765 77889999999999999998764 6777899999999999999999999999999999988654311 123578
Q ss_pred CcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccc
Q 001638 645 NYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKL 724 (1039)
Q Consensus 645 ~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~ 724 (1039)
|++|+|+++++||+|||++++|++|+++||+|+|+||||+.||.+||+++||.. +.+++|.+++.++++|+.+.++++
T Consensus 538 ~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~~~ 615 (903)
T PRK15122 538 DLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVEER 615 (903)
T ss_pred CcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhhhC
Confidence 999999999999999999999999999999999999999999999999999953 468999999999999999999999
Q ss_pred eEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhH
Q 001638 725 QVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGR 804 (1039)
Q Consensus 725 ~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR 804 (1039)
.||||++|+||.++|+.||++ |++|+|||||+||+|||++|||||||| +|+|+||++||+||+||||++|+.++++||
T Consensus 616 ~VfAr~sPe~K~~iV~~Lq~~-G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~gR 693 (903)
T PRK15122 616 TVFAKLTPLQKSRVLKALQAN-GHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKGR 693 (903)
T ss_pred CEEEEeCHHHHHHHHHHHHhC-CCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHHHHH
Confidence 999999999999999999999 999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHhhHHHHhHhccCCCCccccCCCCCCCCCCcchH
Q 001638 805 SVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITV 884 (1039)
Q Consensus 805 ~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alala~e~p~~~lm~~~P~~~~~~li~~ 884 (1039)
++|+||+|+++|+++.|+..++..+++.++..+.|++|+|+||+|++||+ |+++|++|||++++| |||++++++++++
T Consensus 694 ~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal~~d~~~~~~m-~~P~~~~~~~~~~ 771 (903)
T PRK15122 694 ETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSLPWDKMDKEFL-RKPRKWDAKNIGR 771 (903)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhhcCCCCCHhhc-CCCCCCChhhhHH
Confidence 99999999999999999999888888777777799999999999999995 999999999999999 9999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCccchhhHHHHHHHHHHHHHHHHHhccccccccccccchhHHHHHHH
Q 001638 885 TMWRNIIGQSIYQIIVLGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVFIAVL 964 (1039)
Q Consensus 885 ~~~~~i~~~~i~q~~v~~~l~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~qv~n~~~~r~~~~~~~f~~~~~n~~f~~~~ 964 (1039)
.|+..-+..+++.+..+++ .++ .+...........+|..|.+++++|+||.+|+|+.+ .++| +|+..+..+
T Consensus 772 ~~~~~g~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~t~~f~~l~~~q~~~~~~~R~~~-~~~~----~~~~~~~~~ 842 (903)
T PRK15122 772 FMLWIGPTSSIFDITTFAL-MWF---VFAANSVEMQALFQSGWFIEGLLSQTLVVHMLRTQK-IPFI----QSTAALPVL 842 (903)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHH---HhccCcHhhhhhhHHHHHHHHHHHHHHHHHhhCcCC-CCcC----cchHHHHHH
Confidence 8886333333332222222 111 111110011113457889999999999999999863 2444 455544455
Q ss_pred HHHHHHHHH--HHhh--hhhhhcccCCChHHHHHHHHHHHHHHHHHHHHhhhccC
Q 001638 965 VATVGFQVI--IVEL--LGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVG 1015 (1039)
Q Consensus 965 ~~~~~~q~~--~v~~--~~~~~~~~~l~~~~w~~~i~~~~~~~~~~~~~k~i~~~ 1015 (1039)
++++++|++ ++++ ++.+|++.|+++.+|+++++++++.+++.++.|.+-.+
T Consensus 843 ~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~r 897 (903)
T PRK15122 843 LTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYCLVAQGMKRFYIR 897 (903)
T ss_pred HHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 555555544 3555 78999999999999999999999999999898865444
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-134 Score=1273.18 Aligned_cols=836 Identities=32% Similarity=0.482 Sum_probs=717.5
Q ss_pred HHHHHhhHHHHHHHHHHHHHhhccCCCCCC--CCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEe
Q 001638 164 VWEALHDLTLIILMICAAVSIGVGIPTEGW--PDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTR 241 (1039)
Q Consensus 164 ~~~~~~~~~~~il~v~a~ls~~~~~~~~~~--~~~~~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR 241 (1039)
++++|+++++++|++++++|++++...++. ...|++++.|++.+++...++.+++++.++..+++.+. .+.+++|+|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~-~~~~~~ViR 79 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEY-ESEHAKVLR 79 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCceEEEE
Confidence 478999999999999999999998765332 24799999999999999999999999999999999874 566899999
Q ss_pred CCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCceeEeccCCCCCCCccccCCC------------CceeecccEEe
Q 001638 242 DGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRD------------RPFLLSGTKVQ 309 (1039)
Q Consensus 242 ~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGEs~pv~k~~~------------~~~l~sGt~v~ 309 (1039)
||++++|+++||||||+|.|++||+|||||++++|++|.||||+|||||.|+.|..+ ++++|+||.|.
T Consensus 80 dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~ 159 (917)
T TIGR01116 80 DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVV 159 (917)
T ss_pred CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEe
Confidence 999999999999999999999999999999999998899999999999999999643 37899999999
Q ss_pred eCCeEEEEEEeccchhhHHHHHHhccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchh
Q 001638 310 DGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSI 389 (1039)
Q Consensus 310 ~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~ 389 (1039)
+|+++++|++||.+|+.||+.+++.+.+.++||+|+++++++..+..+.+++++++|+++...+.. ......|.
T Consensus 160 ~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~----~~~~~~~~-- 233 (917)
T TIGR01116 160 AGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFND----PALGGGWI-- 233 (917)
T ss_pred cceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----ccccchhH--
Confidence 999999999999999999999999988888999999999999999888777776666544322110 00001221
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEE
Q 001638 390 DAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLW 469 (1039)
Q Consensus 390 ~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~ 469 (1039)
..+..++..++++++++||||||+++++++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++
T Consensus 234 --~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~ 311 (917)
T TIGR01116 234 --QGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVV 311 (917)
T ss_pred --HHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEE
Confidence 234566778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCccc------ccccC---CcccccC-----CCCCHHHHHHHHHHHHhccCCceeecC-CCCccccCCchHHHHHHHHH
Q 001638 470 ICNEAK------TIKSG---DNEKLLK-----PSVSDAVFNIFLQSIFQNTGSEVVKDK-DGRTNILGTPTERAILEFGL 534 (1039)
Q Consensus 470 ~~~~~~------~~~~~---~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~g~p~e~All~~a~ 534 (1039)
..+... +.... +...... ....+...+.+......|+++....++ ++.....|||+|.||++++.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~ 391 (917)
T TIGR01116 312 ALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVE 391 (917)
T ss_pred ecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHH
Confidence 865321 00000 0000000 001122344455555666665543322 22334579999999999999
Q ss_pred HhCCCccc----------------ccccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhhccCCc
Q 001638 535 ILGGDSTF----------------HREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGK 598 (1039)
Q Consensus 535 ~~g~~~~~----------------~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~ 598 (1039)
+.|.+... .++.+++++.+||||+||||+++++.+ +++++|+|||||.|+++|++++..+|.
T Consensus 392 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~--~~~~~~~KGApe~il~~c~~~~~~~g~ 469 (917)
T TIGR01116 392 KMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS--TGNKLFVKGAPEGVLERCTHILNGDGR 469 (917)
T ss_pred HcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeC--CcEEEEEcCChHHHHHhccceecCCCC
Confidence 98876543 245678999999999999999999864 568899999999999999998887788
Q ss_pred cccCCHHHHHHHHHHHHHHhH-ccCcEEEEEEEecCCCCC--------cCCCCCCCcEeeeeecccCCCCccHHHHHHHH
Q 001638 599 AVPISEEQRKNLTNVINGFSS-EALRTLCLAFQDIKGNHK--------AESIPENNYTLIAVVGIKDPVRPGVREAVETC 669 (1039)
Q Consensus 599 ~~~l~~~~~~~~~~~i~~~a~-~glr~l~~A~k~l~~~~~--------~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l 669 (1039)
..|++++.++++.+.+++|++ +|+||+++|||+++.+.. ..+..|+|++|+|+++++||+||+++++|+.|
T Consensus 470 ~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l 549 (917)
T TIGR01116 470 AVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKC 549 (917)
T ss_pred eeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHH
Confidence 899999999999999999999 999999999999865321 11345889999999999999999999999999
Q ss_pred HHCCCEEEEECCCCHHHHHHHHHHcCCCCCCC----ceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhc
Q 001638 670 LAAGITVRMVTGDNIHTAKAIAKECGILTDGG----LAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNV 745 (1039)
Q Consensus 670 ~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~----~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~ 745 (1039)
+++||+++|+|||+..||.++|+++||..++. .+++|++++.+.++++.+...+..||||++|+||.++|+.+|+.
T Consensus 550 ~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~ 629 (917)
T TIGR01116 550 RTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQ 629 (917)
T ss_pred HHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999986543 57899999999999999999999999999999999999999988
Q ss_pred CCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 001638 746 FKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVAL 825 (1039)
Q Consensus 746 ~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i 825 (1039)
|++|+|+|||.||+|||++|||||||| +|++++|++||+++.||||++|+++++|||++|+||+|+++|+++.|+..+
T Consensus 630 -g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~ 707 (917)
T TIGR01116 630 -GEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEV 707 (917)
T ss_pred -CCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 999999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCchHHHHHHHHHHHhhHHHHhHhccCCCCccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 001638 826 VINFVAACITGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIVLGVLT 905 (1039)
Q Consensus 826 ~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~i~q~~v~~~l~ 905 (1039)
++.+++.++..+.||+++|++|+|+++|++|+++|+.|||++++|++||+.++++++++.+|+.++.++++|+++.++.+
T Consensus 708 ~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~ 787 (917)
T TIGR01116 708 VCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGF 787 (917)
T ss_pred HHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888899999999999999999999999999999999999999999999999999999999999987743333
Q ss_pred Hhccc---ccc--------cC---CC-----CccchhhHHHHHHHHHHHHHHHHHhcccccccccc-ccchhHHHHHHHH
Q 001638 906 FCGKK---ILK--------LS---GP-----NATLILNTFIFNSFVFCQVFNEINSRDMEKINVFR-GIFSSWVFIAVLV 965 (1039)
Q Consensus 906 ~~~~~---~~~--------~~---~~-----~~~~~~~T~~f~~~v~~qv~n~~~~r~~~~~~~f~-~~~~n~~f~~~~~ 965 (1039)
++... +.. ++ +. ......+|++|++|+++|+||.+|+|+. +.++|+ ++++|++|+++++
T Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~-~~~~~~~~~~~n~~~~~~~~ 866 (917)
T TIGR01116 788 VWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSE-DQSLLRMPPWVNKWLIGAIC 866 (917)
T ss_pred HHHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCC-cccccccCCccCHHHHHHHH
Confidence 22111 111 01 00 0124568999999999999999999996 567776 7889999999999
Q ss_pred HHHHHHHHH--HhhhhhhhcccCCChHHHHHHHHHHHHHHHHHHHHhhhc
Q 001638 966 ATVGFQVII--VELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIP 1013 (1039)
Q Consensus 966 ~~~~~q~~~--v~~~~~~~~~~~l~~~~w~~~i~~~~~~~~~~~~~k~i~ 1013 (1039)
+++++|+++ +++++.+|++.|+++.+|+++++++++.++++++.|++.
T Consensus 867 ~~~~l~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~ 916 (917)
T TIGR01116 867 LSMALHFLILYVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFS 916 (917)
T ss_pred HHHHHHHHHHHhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999887 788999999999999999999999999999999999874
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-133 Score=1254.39 Aligned_cols=819 Identities=24% Similarity=0.360 Sum_probs=686.6
Q ss_pred CHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCccc
Q 001638 119 GVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVY 198 (1039)
Q Consensus 119 gv~~~~~~l~t~~~~GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~ 198 (1039)
..+.+.+.|+++. +||+++|+++|+++||+|+++.++++++|+.++++|+++++++|++++++|++++ .|+
T Consensus 53 ~~~~v~~~l~~~~-~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~--------~~~ 123 (902)
T PRK10517 53 PEEELWKTFDTHP-EGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE--------DLF 123 (902)
T ss_pred CHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc--------cHH
Confidence 5777888899986 6999999999999999999999999999999999999999999999999999875 688
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeC------CeEEEEEcCCcccCcEEEEcCCCcccccEE
Q 001638 199 DGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRD------GYRKKLSIYDLVVGDIVHLSIGDQVPADGI 272 (1039)
Q Consensus 199 d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~------G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgi 272 (1039)
+++.|++.+++..+++.+++++.++..++|.+.. +.+++|+|| |++++|+++||||||+|.|++||+|||||+
T Consensus 124 ~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~-~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~ 202 (902)
T PRK10517 124 AAGVIALMVAISTLLNFIQEARSTKAADALKAMV-SNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLR 202 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEE
Confidence 8888888888888899999999999998888754 458999999 789999999999999999999999999999
Q ss_pred EEeeCceeEeccCCCCCCCccccCCCC------------ceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCC
Q 001638 273 LISGYSLTIDESSLSGETEPVHINRDR------------PFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDE 340 (1039)
Q Consensus 273 ll~g~~l~VDES~LTGEs~pv~k~~~~------------~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~ 340 (1039)
+++|++|.||||+|||||.|+.|..++ +++|+||.|.+|+++++|++||.+|++|+|.+++.+...++
T Consensus 203 li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~~~ 282 (902)
T PRK10517 203 ILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEP 282 (902)
T ss_pred EEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCCCC
Confidence 999999999999999999999997543 57999999999999999999999999999999999888899
Q ss_pred CchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHH
Q 001638 341 TPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLS 420 (1039)
Q Consensus 341 tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~ 420 (1039)
+|+|+.++++++++..++++++.+++++.. +.. ..+...+..++++++++||||||++++++
T Consensus 283 t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~---~~~---------------~~~~~~l~~alsv~V~~~Pe~LP~~vt~~ 344 (902)
T PRK10517 283 NAFQQGISRVSWLLIRFMLVMAPVVLLING---YTK---------------GDWWEAALFALSVAVGLTPEMLPMIVTST 344 (902)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhhhHHH---Hhc---------------CCHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 999999999999988887776665554421 110 12346778899999999999999999999
Q ss_pred HHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHHHH
Q 001638 421 LAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQ 500 (1039)
Q Consensus 421 la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 500 (1039)
++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|.+++..... . .++. +.
T Consensus 345 la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~~-------~--------~~~l----l~ 405 (902)
T PRK10517 345 LARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISGK-------T--------SERV----LH 405 (902)
T ss_pred HHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCCC-------C--------HHHH----HH
Confidence 999999999999999999999999999999999999999999999986421100 0 1112 22
Q ss_pred HHHhccCCceeecCCCCccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeC
Q 001638 501 SIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKG 580 (1039)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KG 580 (1039)
..+.|+... ...|||+|.|+++++...+ .......++.++.+||||++|||+++++..+ +.+++++||
T Consensus 406 ~a~l~~~~~---------~~~~~p~d~All~~a~~~~--~~~~~~~~~~~~~~pFds~~k~msvvv~~~~-~~~~~~~KG 473 (902)
T PRK10517 406 SAWLNSHYQ---------TGLKNLLDTAVLEGVDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENT-EHHQLICKG 473 (902)
T ss_pred HHHhcCCcC---------CCCCCHHHHHHHHHHHhcc--hhhhhhcCceEEEeeeCCCcceEEEEEEECC-CeEEEEEeC
Confidence 233333211 1258999999999886533 1223456788999999999999999988665 678899999
Q ss_pred cHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCcCC-CCCCCcEeeeeecccCCCC
Q 001638 581 ASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAES-IPENNYTLIAVVGIKDPVR 659 (1039)
Q Consensus 581 a~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~-~~e~~l~~lG~v~i~D~lR 659 (1039)
|||.++++|+++.. +|...+++++.++.+.+.+++++++|+|++++|||+++..+.+.+ ..|+|++|+|+++|+||+|
T Consensus 474 a~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R 552 (902)
T PRK10517 474 ALEEILNVCSQVRH-NGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPK 552 (902)
T ss_pred chHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcch
Confidence 99999999998754 566789999999999999999999999999999998865432211 2478999999999999999
Q ss_pred ccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHH
Q 001638 660 PGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILV 739 (1039)
Q Consensus 660 ~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V 739 (1039)
||++++|++|+++||+|+|+||||+.||.+||+++||. ++.+++|.+++.++++|+++.++++.||||++|+||.++|
T Consensus 553 ~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~--~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV 630 (902)
T PRK10517 553 ETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD--AGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIV 630 (902)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--ccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHH
Confidence 99999999999999999999999999999999999995 3579999999999999999999999999999999999999
Q ss_pred HHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHH
Q 001638 740 TQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLT 819 (1039)
Q Consensus 740 ~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~ 819 (1039)
+.||++ |++|+|||||+||+|||++|||||||| +|+|+||++||+||+||||++|++++++||++|+||+|+++|+++
T Consensus 631 ~~Lq~~-G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls 708 (902)
T PRK10517 631 TLLKRE-GHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTAS 708 (902)
T ss_pred HHHHHC-CCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999 999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHhhHHHHhHhccCCCCccccCCCCCCCCCCcchHHHHHHHHHHHHHHHH
Q 001638 820 VNIVALVINFVAACITGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQII 899 (1039)
Q Consensus 820 ~Ni~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~i~q~~ 899 (1039)
.|+..++..+++.++..+.||+|+|+||+|+++| +++++|++|||++++|++||+. +...+.+.|+..-+..+++.+.
T Consensus 709 ~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d~~~~~~m~~p~r~-~~~~~~~~~~~~g~~~~~~~~~ 786 (902)
T PRK10517 709 SNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQKPQRW-NPADLGRFMVFFGPISSIFDIL 786 (902)
T ss_pred hhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCCCCChhhhcCCCCC-CHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998888887776668999999999999999 7899999999999999999972 2233444443322222222222
Q ss_pred HHHHHHHhcccccccCCCCccchhhHHHHHHHHHHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHHH--Hh-
Q 001638 900 VLGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVFIAVLVATVGFQVII--VE- 976 (1039)
Q Consensus 900 v~~~l~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~qv~n~~~~r~~~~~~~f~~~~~n~~f~~~~~~~~~~q~~~--v~- 976 (1039)
.++++.+ .++..........+|..|.+++++|++|.+|+|+.+ . ++|+|+..+..++++++++++. ++
T Consensus 787 ~~~~~~~----~~~~~~~~~~~~~~~~~F~~~~~~q~~~~~~~R~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~p~ 857 (902)
T PRK10517 787 TFCLMWW----VFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTRR-I----PFIQSRAAWPLMIMTLIVMAVGIALPF 857 (902)
T ss_pred HHHHHHH----HccccchhhHhHHHHHHHHHHHHHHHHHHHhhccCC-C----CcccchHHHHHHHHHHHHHHHHHHhhH
Confidence 2221111 111110000012345569999999999999999863 2 3456666666666666665443 45
Q ss_pred -hhhhhhcccCCC--hHHHHHHHHHHHHHHHHHHHHhhhcc
Q 001638 977 -LLGTFATTVPLN--WKLWLASVVIGAISMPFGVLLKCIPV 1014 (1039)
Q Consensus 977 -~~~~~~~~~~l~--~~~w~~~i~~~~~~~~~~~~~k~i~~ 1014 (1039)
+++.+|++.||+ +..|+++++++++ ++.++.|.+-.
T Consensus 858 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~~~ 896 (902)
T PRK10517 858 SPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGFYS 896 (902)
T ss_pred HHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 578899999999 7888888877776 55677776543
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-133 Score=1251.84 Aligned_cols=819 Identities=24% Similarity=0.340 Sum_probs=691.7
Q ss_pred CHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCccc
Q 001638 119 GVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVY 198 (1039)
Q Consensus 119 gv~~~~~~l~t~~~~GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~ 198 (1039)
.++++.+.|+++. +||+++|+++|+++||+|+++.++++++|++++++|+++++++|+++++++++.+ .|+
T Consensus 19 ~~~~~~~~l~~~~-~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~--------~~~ 89 (867)
T TIGR01524 19 GKETLLRKLGVHE-TGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD--------DLE 89 (867)
T ss_pred CHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh--------hHH
Confidence 6788999999986 6999999999999999999999988999999999999999999999999999875 688
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEe------CCeEEEEEcCCcccCcEEEEcCCCcccccEE
Q 001638 199 DGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTR------DGYRKKLSIYDLVVGDIVHLSIGDQVPADGI 272 (1039)
Q Consensus 199 d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR------~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgi 272 (1039)
+++.|++.+++..+++.+++++.++..+++.+.. +..++|+| ||++++|+++||||||+|.|++||+|||||+
T Consensus 90 ~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~-~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ 168 (867)
T TIGR01524 90 ATVIIALMVLASGLLGFIQESRAERAAYALKNMV-KNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADAR 168 (867)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEE
Confidence 8999998888999999999999998888887754 46899999 9999999999999999999999999999999
Q ss_pred EEeeCceeEeccCCCCCCCccccCCCC------------ceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCC
Q 001638 273 LISGYSLTIDESSLSGETEPVHINRDR------------PFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDE 340 (1039)
Q Consensus 273 ll~g~~l~VDES~LTGEs~pv~k~~~~------------~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~ 340 (1039)
+++|++|.||||+|||||.|+.|..++ +++|+||.|.+|+++++|++||.+|++||+.+++.+ ..++
T Consensus 169 li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~-~~~~ 247 (867)
T TIGR01524 169 VISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE-RRGQ 247 (867)
T ss_pred EEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhC-CCCC
Confidence 999999999999999999999997643 579999999999999999999999999999999988 7778
Q ss_pred CchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHH
Q 001638 341 TPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLS 420 (1039)
Q Consensus 341 tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~ 420 (1039)
+|+|++++++++++..++++++.++++++.+ .. ..+...+..++++++++||||||++++++
T Consensus 248 t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~---~~---------------~~~~~~~~~al~l~v~~iP~~Lp~~vt~~ 309 (867)
T TIGR01524 248 TAFDKGVKSVSKLLIRFMLVMVPVVLMINGL---MK---------------GDWLEAFLFALAVAVGLTPEMLPMIVSSN 309 (867)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHheehHHH---hc---------------CCHHHHHHHHHHHHHHhCcchHHHHHHHH
Confidence 9999999999999988887777666554321 10 12346788899999999999999999999
Q ss_pred HHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHHHH
Q 001638 421 LAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQ 500 (1039)
Q Consensus 421 la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 500 (1039)
++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|++++..... . +++. + .
T Consensus 310 la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~-------~--------~~~~---l-~ 370 (867)
T TIGR01524 310 LAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGE-------T--------SERV---L-K 370 (867)
T ss_pred HHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCC-------C--------HHHH---H-H
Confidence 999999999999999999999999999999999999999999999987531110 0 1112 2 2
Q ss_pred HHHhccCCceeecCCCCccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeC
Q 001638 501 SIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKG 580 (1039)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KG 580 (1039)
.++.|+... ...+||+|.|+++++.... ....+..++.++.+||||++|||+++++..+ +.+++++||
T Consensus 371 ~a~l~~~~~---------~~~~~p~~~Al~~~~~~~~--~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~-~~~~~~~KG 438 (867)
T TIGR01524 371 MAWLNSYFQ---------TGWKNVLDHAVLAKLDESA--ARQTASRWKKVDEIPFDFDRRRLSVVVENRA-EVTRLICKG 438 (867)
T ss_pred HHHHhCCCC---------CCCCChHHHHHHHHHHhhc--hhhHhhcCceEEEeccCCCcCEEEEEEEcCC-ceEEEEEeC
Confidence 222333211 1246999999999987532 2233457888999999999999999998765 567899999
Q ss_pred cHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCcC-CCCCCCcEeeeeecccCCCC
Q 001638 581 ASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAE-SIPENNYTLIAVVGIKDPVR 659 (1039)
Q Consensus 581 a~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~-~~~e~~l~~lG~v~i~D~lR 659 (1039)
|||.++++|+++.. +|...+++++.++++++.+++|+++|+|++++|||+++.++.+. +..|++++|+|+++++||+|
T Consensus 439 a~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R 517 (867)
T TIGR01524 439 AVEEMLTVCTHKRF-GGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPK 517 (867)
T ss_pred cHHHHHHhchhhhc-CCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCc
Confidence 99999999998754 56777899999999999999999999999999999886543211 12478999999999999999
Q ss_pred ccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHH
Q 001638 660 PGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILV 739 (1039)
Q Consensus 660 ~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V 739 (1039)
||++++|++|+++||+|+|+||||..||++||+++||.. +.+++|.+++.++++|+.+.++++.||||++|+||.++|
T Consensus 518 ~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV 595 (867)
T TIGR01524 518 ESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRII 595 (867)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHH
Confidence 999999999999999999999999999999999999964 468999999999999999999999999999999999999
Q ss_pred HHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHH
Q 001638 740 TQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLT 819 (1039)
Q Consensus 740 ~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~ 819 (1039)
+.+|++ |++|+|||||+||+|||++|||||||| +|+|+||++||+||+||||++|+.++++||++|+||+|+++|+++
T Consensus 596 ~~lq~~-G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls 673 (867)
T TIGR01524 596 GLLKKA-GHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTAS 673 (867)
T ss_pred HHHHhC-CCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999 999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHhhHHHHhHhccCCCCccccCCCCCCCCCCcchHHHHHHHHHHHHHHHH
Q 001638 820 VNIVALVINFVAACITGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQII 899 (1039)
Q Consensus 820 ~Ni~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~i~q~~ 899 (1039)
.|+..++..+++.++..+.||+++|+||+|++|| +|+++|++|||++++|++||+ ++++.+.+.+ +..+++..+
T Consensus 674 ~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~~~~~~~~~m~~p~~-~~~~~~~~~~----~~~g~~~~~ 747 (867)
T TIGR01524 674 SNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKKPHQ-WEQKGMGRFM----LCIGPVSSI 747 (867)
T ss_pred hhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhcCCCCChHhhCCCCC-CChhhHHHHH----HHHHHHHHH
Confidence 9999998888888777779999999999999999 799999999999999987776 6665544443 334444332
Q ss_pred HHHHHHHhcccccccCCCCccchhhHHHHHHHHHHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHHHH--hh
Q 001638 900 VLGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVFIAVLVATVGFQVIIV--EL 977 (1039)
Q Consensus 900 v~~~l~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~qv~n~~~~r~~~~~~~f~~~~~n~~f~~~~~~~~~~q~~~v--~~ 977 (1039)
+.+..++.....+...+.......+|..|.+++++|++|.+|+|+.+. ++|+|+..+..+++++++|++++ ++
T Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~R~~~~-----~~~~n~~~~~~~~~~~~~~~~~~~~p~ 822 (867)
T TIGR01524 748 FDIATFLLMWFVFSANTVEEQALFQSGWFVVGLLSQTLVVHMIRTEKI-----PFIQSRAAAPVMIATLLVMALGIIIPF 822 (867)
T ss_pred HHHHHHHHHHHHhcccchhhhhHHHHHHHHHHHHHHHHHHHhhCcCCC-----CcCcchHHHHHHHHHHHHHHHHHHhch
Confidence 221111111111111111111234688899999999999999998632 34567888888888877776554 45
Q ss_pred --hhhhhcccCC--ChHHHHHHHHHHHHHHHHHHHHhhhccC
Q 001638 978 --LGTFATTVPL--NWKLWLASVVIGAISMPFGVLLKCIPVG 1015 (1039)
Q Consensus 978 --~~~~~~~~~l--~~~~w~~~i~~~~~~~~~~~~~k~i~~~ 1015 (1039)
++.+|++.|+ ++..|++++.++++ ++.++.|.+-.+
T Consensus 823 ~~~~~~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~~~~~ 862 (867)
T TIGR01524 823 SPLGHSIGLVSLPLSYFPWLIAILVGYM--ATMQLVKTFYIR 862 (867)
T ss_pred hhhhhhhccccCCccHHHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 4789999987 66788888877765 567788865444
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-120 Score=1125.33 Aligned_cols=744 Identities=23% Similarity=0.351 Sum_probs=624.1
Q ss_pred CCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCcccchhHHHHHHHHHHHH
Q 001638 134 GVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIV 213 (1039)
Q Consensus 134 GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~d~~~i~~~lllv~~v 213 (1039)
||+++|+++|+++||+|++++++ +++|..++++|+++++++|+++++++++++ .|++++.|++.+++...+
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~--------~~~~~~~i~~~~~i~~~i 71 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKK-VSPLLKFLGFFWNPLSWVMEAAAIIAIALE--------NWVDFVIILGLLLLNATI 71 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhhc--------chhhhhhhhhhhHHHHHH
Confidence 89999999999999999999844 567899999999999999999999999886 588888888888888888
Q ss_pred HHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCceeEeccCCCCCCCcc
Q 001638 214 TAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPV 293 (1039)
Q Consensus 214 ~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGEs~pv 293 (1039)
+.+++++.++..+++.+. .+.+++|+|||++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.|+
T Consensus 72 ~~~qe~~a~~~~~~L~~~-~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV 150 (755)
T TIGR01647 72 GFIEENKAGNAVEALKQS-LAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPV 150 (755)
T ss_pred HHHHHHHHHHHHHHHHhh-CCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccce
Confidence 999999999999888764 4668999999999999999999999999999999999999999998899999999999999
Q ss_pred ccCCCCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001638 294 HINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRF 373 (1039)
Q Consensus 294 ~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~ 373 (1039)
.|..+ +.+|+||.|.+|+++++|++||.+|++|+|.+++.+++.+++|+|+.+++++.++..+.+++++++++++...
T Consensus 151 ~K~~~-~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~- 228 (755)
T TIGR01647 151 TKKTG-DIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFG- 228 (755)
T ss_pred EeccC-CeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 99865 5699999999999999999999999999999999988888999999999999999888777776666543210
Q ss_pred HHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccccccccchhhhcccceeEEEec
Q 001638 374 LVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTD 453 (1039)
Q Consensus 374 ~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~D 453 (1039)
. ..++...+..++++++++|||+||+++|++++.++++|+|+|++||+++++|+||++|+||||
T Consensus 229 -~---------------~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~D 292 (755)
T TIGR01647 229 -R---------------GESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSD 292 (755)
T ss_pred -c---------------CCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEec
Confidence 1 012446788899999999999999999999999999999999999999999999999999999
Q ss_pred CcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHHHHHHHhccCCceeecCCCCccccCCchHHHHHHHH
Q 001638 454 KTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFG 533 (1039)
Q Consensus 454 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a 533 (1039)
||||||+|+|+|.+++..+..+ +++ +.+..+..++. ...+||+|.|+++++
T Consensus 293 KTGTLT~~~~~v~~~~~~~~~~---------------~~~--~~l~~a~~~~~------------~~~~~pi~~Ai~~~~ 343 (755)
T TIGR01647 293 KTGTLTLNKLSIDEILPFFNGF---------------DKD--DVLLYAALASR------------EEDQDAIDTAVLGSA 343 (755)
T ss_pred CCCccccCceEEEEEEecCCCC---------------CHH--HHHHHHHHhCC------------CCCCChHHHHHHHHH
Confidence 9999999999999998643210 111 12222222221 124699999999988
Q ss_pred HHhCCCcccccccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHH
Q 001638 534 LILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNV 613 (1039)
Q Consensus 534 ~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~ 613 (1039)
.+.+ ..+..+++++.+||+|.+|+|+++++.+++++.+.++||+||.++++|++. ++.++++++.
T Consensus 344 ~~~~----~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~~~~~~~ 408 (755)
T TIGR01647 344 KDLK----EARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-----------KEIEEKVEEK 408 (755)
T ss_pred HHhH----HHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-----------HHHHHHHHHH
Confidence 7543 234567889999999999999999886543667789999999999999742 3456678888
Q ss_pred HHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
Q 001638 614 INGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKE 693 (1039)
Q Consensus 614 i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~ 693 (1039)
+++++++|+|++++|||+ .|++++|+|+++++||+|||++++|++||++||+|+|+|||++.||++||++
T Consensus 409 ~~~~~~~G~rvl~vA~~~----------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~ 478 (755)
T TIGR01647 409 VDELASRGYRALGVARTD----------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARR 478 (755)
T ss_pred HHHHHhCCCEEEEEEEEc----------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH
Confidence 999999999999999983 2478999999999999999999999999999999999999999999999999
Q ss_pred cCCCCC---CCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcce
Q 001638 694 CGILTD---GGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGL 770 (1039)
Q Consensus 694 ~GI~~~---~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGI 770 (1039)
+||..+ .+.+.+|.+.+.++++++++.+.++.||||++|+||.++|+.+|++ |++|+|||||+||+|||++|||||
T Consensus 479 lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~-G~~VamvGDGvNDapAL~~AdVGI 557 (755)
T TIGR01647 479 LGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKR-GHLVGMTGDGVNDAPALKKADVGI 557 (755)
T ss_pred cCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhc-CCEEEEEcCCcccHHHHHhCCeeE
Confidence 999753 2345566677788999999999999999999999999999999999 999999999999999999999999
Q ss_pred eecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHH
Q 001638 771 AMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAVQLLWVNM 850 (1039)
Q Consensus 771 amgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~~~~pl~~~qll~vnl 850 (1039)
||| +|+|+||++||+||+||||++|++++++||++|+||+|+++|+++.|+..+++.+++.++.+ .||+|+|+||+|+
T Consensus 558 Am~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~-~~l~~~~il~~~l 635 (755)
T TIGR01647 558 AVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN-FYFPPIMVVIIAI 635 (755)
T ss_pred Eec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC-cchhHHHHHHHHH
Confidence 999 89999999999999999999999999999999999999999999999998887777766555 4699999999999
Q ss_pred HhhHHHHhHhccCCCCccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhccc---ccccCCC-CccchhhHH
Q 001638 851 IMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIVLGVLTFCGKK---ILKLSGP-NATLILNTF 926 (1039)
Q Consensus 851 i~d~l~alala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~i~q~~v~~~l~~~~~~---~~~~~~~-~~~~~~~T~ 926 (1039)
++|. +++++++|++++. ++| ++..++ .+++.++..+++..+..+.++++... +....+. ......+|+
T Consensus 636 ~~d~-~~~~l~~~~~~~~---~~p---~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 707 (755)
T TIGR01647 636 LNDG-TIMTIAYDNVKPS---KLP---QRWNLR-EVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHGNLQSL 707 (755)
T ss_pred HHhH-hHhhccCCCCCCC---CCC---CccchH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccccccHhhhHHH
Confidence 9996 6999999998752 333 333344 66666777777766654444332211 1111111 122357899
Q ss_pred HHHHHHHHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHH
Q 001638 927 IFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVFIAVLVATVGFQVI 973 (1039)
Q Consensus 927 ~f~~~v~~qv~n~~~~r~~~~~~~f~~~~~n~~f~~~~~~~~~~q~~ 973 (1039)
.|.++++.|.|+.+++|+.. ..|+. ..|++++..+++.+++..+
T Consensus 708 ~f~~~~~~~~~~~~~~r~~~--~~~~~-~p~~~l~~~~~~~~~~~~~ 751 (755)
T TIGR01647 708 IYLQVSISGQATIFVTRTHG--FFWSE-RPGKLLFIAFVIAQIIATF 751 (755)
T ss_pred HHHHHHHHHHHHHheeccCC--CCccc-CCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999853 23333 3555555555554444443
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-118 Score=1143.40 Aligned_cols=794 Identities=22% Similarity=0.322 Sum_probs=636.6
Q ss_pred CCCCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCcccchhHHHHHHHHHH
Q 001638 132 PDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVV 211 (1039)
Q Consensus 132 ~~GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~d~~~i~~~lllv~ 211 (1039)
..||+.+|+++|++.||.|+++.++ +++|+++++++.+|+++++++++++++.- +.|++++.|++.+++..
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~-~s~~~ll~~~~~~p~~i~~i~~~~l~~~~--------~~~~~~~~i~~i~~~~~ 207 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPV-PSFLELLKEEVLHPFYVFQVFSVILWLLD--------EYYYYSLCIVFMSSTSI 207 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhh--------hhHHHHHHHHHHHHHHH
Confidence 4699999999999999999999854 79999999999999999988886666542 25788888777777766
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEc--CCCcccccEEEEeeCceeEeccCCCCC
Q 001638 212 IVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLS--IGDQVPADGILISGYSLTIDESSLSGE 289 (1039)
Q Consensus 212 ~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~--~Gd~VPaDgill~g~~l~VDES~LTGE 289 (1039)
.++.+++++..++.+++.. .+..++|+|||++++|+++||||||||.|+ +||+|||||++++|+ +.||||+||||
T Consensus 208 ~~~~~~~~k~~~~L~~~~~--~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LTGE 284 (1054)
T TIGR01657 208 SLSVYQIRKQMQRLRDMVH--KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLTGE 284 (1054)
T ss_pred HHHHHHHHHHHHHHHHhhc--CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEecccccCC
Confidence 6666666665555555432 356899999999999999999999999999 999999999999995 69999999999
Q ss_pred CCccccCCC-----------------CceeecccEEee-------CCeEEEEEEeccchhhHHHHHHhccCCCCCCchHH
Q 001638 290 TEPVHINRD-----------------RPFLLSGTKVQD-------GSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQV 345 (1039)
Q Consensus 290 s~pv~k~~~-----------------~~~l~sGt~v~~-------G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~ 345 (1039)
|.|+.|.+. ++++|+||.|.+ |.+.++|++||.+|..|++.+++......++++++
T Consensus 285 S~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~ 364 (1054)
T TIGR01657 285 SVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYK 364 (1054)
T ss_pred ccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHH
Confidence 999999641 347999999985 78999999999999999999999887788899988
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHH
Q 001638 346 KLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAM 425 (1039)
Q Consensus 346 ~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~ 425 (1039)
.+.++...+..+ +++.+++++...+.. ...+...+..++++++++||+|||+++++++++++
T Consensus 365 ~~~~~~~~l~~~----a~i~~i~~~~~~~~~--------------~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~ 426 (1054)
T TIGR01657 365 DSFKFILFLAVL----ALIGFIYTIIELIKD--------------GRPLGKIILRSLDIITIVVPPALPAELSIGINNSL 426 (1054)
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHc--------------CCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHH
Confidence 877665544333 333333222111110 01345678889999999999999999999999999
Q ss_pred HHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHHHHHHHhc
Q 001638 426 KKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQN 505 (1039)
Q Consensus 426 ~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 505 (1039)
+||+|+|++||++.++|++|++|++|||||||||+|+|+|.+++..+...... . .... ........+...++.|
T Consensus 427 ~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~---~--~~~~-~~~~~~~~~~~~~a~C 500 (1054)
T TIGR01657 427 ARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFL---K--IVTE-DSSLKPSITHKALATC 500 (1054)
T ss_pred HHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccc---c--cccc-ccccCchHHHHHHHhC
Confidence 99999999999999999999999999999999999999999998754321100 0 0000 0001112234455666
Q ss_pred cCCceeecCCCCccccCCchHHHHHHHHHHh-CC--C--ccc----------ccccccEEEEecCCCCCCceEEEEEcCC
Q 001638 506 TGSEVVKDKDGRTNILGTPTERAILEFGLIL-GG--D--STF----------HREESAIVKVEPFNSVKKRMSVLVSLPN 570 (1039)
Q Consensus 506 ~~~~~~~~~~~~~~~~g~p~e~All~~a~~~-g~--~--~~~----------~~~~~~il~~~pF~s~rkrmsvvv~~~~ 570 (1039)
++..... + ...|||+|.|+++++... .. + ... ...++++++.+||+|++|||||+++.++
T Consensus 501 ~~~~~~~---~--~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~ 575 (1054)
T TIGR01657 501 HSLTKLE---G--KLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTND 575 (1054)
T ss_pred CeeEEEC---C--EEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcC
Confidence 6654321 2 567999999999975311 11 0 000 0246889999999999999999999765
Q ss_pred CCeEEEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCC------CcCCCCCC
Q 001638 571 NGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNH------KAESIPEN 644 (1039)
Q Consensus 571 ~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~------~~~~~~e~ 644 (1039)
++++++|+|||||.|+++|++. +.++.+.+.+++|+++|+||+++|||++++.+ .+.+..|+
T Consensus 576 ~~~~~~~~KGApE~Il~~c~~~------------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~ 643 (1054)
T TIGR01657 576 ERSPDAFVKGAPETIQSLCSPE------------TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVES 643 (1054)
T ss_pred CCeEEEEEECCHHHHHHHcCCc------------CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhc
Confidence 4678899999999999999841 12356788899999999999999999987422 12245789
Q ss_pred CcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCC------------------------
Q 001638 645 NYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG------------------------ 700 (1039)
Q Consensus 645 ~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~------------------------ 700 (1039)
||+|+|+++|+||+||+++++|+.|+++||+|+|+||||+.||.+||++|||..++
T Consensus 644 ~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~ 723 (1054)
T TIGR01657 644 NLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVI 723 (1054)
T ss_pred CceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEec
Confidence 99999999999999999999999999999999999999999999999999997533
Q ss_pred -----------------------------CceeeCccccc---CCHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCC
Q 001638 701 -----------------------------GLAIEGTDFRS---KNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKE 748 (1039)
Q Consensus 701 -----------------------------~~vi~G~~~~~---~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~ 748 (1039)
..+++|++++. +.++++.+++.++.||||++|+||.++|+.||+. |+
T Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~-g~ 802 (1054)
T TIGR01657 724 DSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKL-DY 802 (1054)
T ss_pred CccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhC-CC
Confidence 14677777755 4567899999999999999999999999999999 99
Q ss_pred EEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001638 749 VVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVIN 828 (1039)
Q Consensus 749 ~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~ 828 (1039)
+|+|||||+||+||||+|||||||| . +|+ ..+||+++.+|||++|+++|+|||+++.|+++.++|.+.+++...+..
T Consensus 803 ~V~m~GDG~ND~~ALK~AdVGIam~-~-~da-s~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~ 879 (1054)
T TIGR01657 803 TVGMCGDGANDCGALKQADVGISLS-E-AEA-SVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSV 879 (1054)
T ss_pred eEEEEeCChHHHHHHHhcCcceeec-c-ccc-eeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998 3 354 489999999999999999999999999999999999999998875543
Q ss_pred HHHHHHcCCCchHHHHHHHHHHHhhHHHHhHhccCCCCccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhc
Q 001638 829 FVAACITGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIVLGVLTFCG 908 (1039)
Q Consensus 829 ~~~~~~~~~~pl~~~qll~vnli~d~l~alala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~i~q~~v~~~l~~~~ 908 (1039)
++ ++...+||+++|+||+|+++|++++++++.++|.+++|++||. ++++++.++..+++|+++++++.++.++..
T Consensus 880 ~~--l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P~---~~l~~~~~~~si~~q~~i~~~~~~~~~~~~ 954 (1054)
T TIGR01657 880 SI--LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERPP---SNLFSVYILTSVLIQFVLHILSQVYLVFEL 954 (1054)
T ss_pred HH--HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCCC---ccccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 3334589999999999999999999999999999999999994 689999999999999999988776665543
Q ss_pred cc--ccc------cCCCCccchhhHHHHHHHHHHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHH----HHh
Q 001638 909 KK--ILK------LSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVFIAVLVATVGFQVI----IVE 976 (1039)
Q Consensus 909 ~~--~~~------~~~~~~~~~~~T~~f~~~v~~qv~n~~~~r~~~~~~~f~~~~~n~~f~~~~~~~~~~q~~----~v~ 976 (1039)
.. |+. .++.......+|++| .++.+|.++.+++++. ..++.+++++|+.|+..++++++++++ +++
T Consensus 955 ~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~-g~pf~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1054)
T TIGR01657 955 HAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSK-GPPFREPIYKNKPFVYLLITGLGLLLVLLLDPHP 1032 (1054)
T ss_pred hhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcC-CcchhhhHHHhHHHHHHHHHHHHHHHHhhhCCCH
Confidence 22 321 111112234579999 5555666666777775 344455889999888877777666552 246
Q ss_pred hhhhhhcccCCCh
Q 001638 977 LLGTFATTVPLNW 989 (1039)
Q Consensus 977 ~~~~~~~~~~l~~ 989 (1039)
+++.+|+++|++.
T Consensus 1033 ~l~~~~~~~~~~~ 1045 (1054)
T TIGR01657 1033 LLGKILQIVPLPQ 1045 (1054)
T ss_pred HHHhhheeeeCCH
Confidence 7899999999985
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-122 Score=1055.09 Aligned_cols=872 Identities=28% Similarity=0.415 Sum_probs=731.4
Q ss_pred CCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhccC---CC--CC
Q 001638 118 GGVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGI---PT--EG 192 (1039)
Q Consensus 118 ~gv~~~~~~l~t~~~~GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~~---~~--~~ 192 (1039)
..++++++++.+|..+||+.+++.+++++-|+|.+++|+..+-|..+.+|+.....++++++++++++... ++ +.
T Consensus 42 ~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~ 121 (1019)
T KOG0203|consen 42 LSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDP 121 (1019)
T ss_pred CCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCC
Confidence 37899999999999999999999999999999999999999999999999999999999999998865432 11 11
Q ss_pred CCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccc
Q 001638 193 WPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDK---EKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPA 269 (1039)
Q Consensus 193 ~~~~~~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~---~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPa 269 (1039)
..+..|-+..+ ..+++++.+-.|.|+.+-.+..+ ..-+..++|+|||..+.+..+||||||+|.++-||+|||
T Consensus 122 ~~~nly~giiL----~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPA 197 (1019)
T KOG0203|consen 122 SDDNLYLGIVL----AAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPA 197 (1019)
T ss_pred CCcceEEEEEE----EEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCcccc
Confidence 22344444322 23344555555555555444433 244678999999999999999999999999999999999
Q ss_pred cEEEEeeCceeEeccCCCCCCCccccC---------CCCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCC
Q 001638 270 DGILISGYSLTIDESSLSGETEPVHIN---------RDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDE 340 (1039)
Q Consensus 270 Dgill~g~~l~VDES~LTGEs~pv~k~---------~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~ 340 (1039)
|.+++++.++++|+|+|||||+|...+ +..|+-|.+|.+.+|.++++|.+||.+|..|+|..+...-+..+
T Consensus 198 DiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~~~ 277 (1019)
T KOG0203|consen 198 DIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLEDGK 277 (1019)
T ss_pred eeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccCCCCC
Confidence 999999999999999999999999876 23567899999999999999999999999999999988888899
Q ss_pred CchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHH
Q 001638 341 TPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLS 420 (1039)
Q Consensus 341 tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~ 420 (1039)
+|++...+++..++..+++.+++..|++.++. ...++.++...+.++++.+|+|||..+|..
T Consensus 278 t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~------------------gy~~l~avv~~i~iivAnvPeGL~~tvTv~ 339 (1019)
T KOG0203|consen 278 TPIAKEIEHFIHIITGVAIFLGISFFILALIL------------------GYEWLRAVVFLIGIIVANVPEGLLATVTVC 339 (1019)
T ss_pred CcchhhhhchHHHHHHHHHHHHHHHHHHHHhh------------------cchhHHHhhhhheeEEecCcCCccceehhh
Confidence 99999999999999888877777666543321 123456666788999999999999999999
Q ss_pred HHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHHHH
Q 001638 421 LAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQ 500 (1039)
Q Consensus 421 la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 500 (1039)
++...+||++++.+||++.+.|++|+.++||+|||||||+|+|+|.++|.++...+....++........++.....+..
T Consensus 340 LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r 419 (1019)
T KOG0203|consen 340 LTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSR 419 (1019)
T ss_pred HHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999876543222111111111122344455556
Q ss_pred HHHhccCCceeecCCC----CccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEEcCC--CCeE
Q 001638 501 SIFQNTGSEVVKDKDG----RTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPN--NGGF 574 (1039)
Q Consensus 501 ~~~~~~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~--~~~~ 574 (1039)
.++.|+.+.....+.+ +....|++.|.||++|+...-.+....|+.++.+...||||.+|+.-.+.+..+ +.++
T Consensus 420 ~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~ 499 (1019)
T KOG0203|consen 420 IATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRF 499 (1019)
T ss_pred HHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccc
Confidence 6666766655433333 336789999999999999877777888999999999999999999988876553 2467
Q ss_pred EEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCC---------CcCCCCCCC
Q 001638 575 RVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNH---------KAESIPENN 645 (1039)
Q Consensus 575 ~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~---------~~~~~~e~~ 645 (1039)
.+..|||||.++++|+.+. .+|+..|++++.++.+.+...++...|-|+++||++.++++. +....+..+
T Consensus 500 ~l~mKGape~il~~CSTi~-i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~n 578 (1019)
T KOG0203|consen 500 LLVMKGAPERILDRCSTIL-INGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDN 578 (1019)
T ss_pred eeeecCChHHHHhhcccee-ecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchh
Confidence 7889999999999999875 578899999999999999999999999999999999887543 222456789
Q ss_pred cEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCC------------------------CC
Q 001638 646 YTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTD------------------------GG 701 (1039)
Q Consensus 646 l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~------------------------~~ 701 (1039)
+.|+|++.+-||+|..+++|+..||.|||+|+|+|||++.||++||++.||..+ ..
T Consensus 579 l~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a 658 (1019)
T KOG0203|consen 579 LRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKA 658 (1019)
T ss_pred ccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccce
Confidence 999999999999999999999999999999999999999999999999998763 24
Q ss_pred ceeeCcccccCCHHHHHhhcccc--eEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHH
Q 001638 702 LAIEGTDFRSKNPQEMQELIPKL--QVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEV 779 (1039)
Q Consensus 702 ~vi~G~~~~~~~~~~~~~~~~~~--~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ 779 (1039)
.|+.|.++.+++++++++++.+. -||||.||+||+.+|+..|+. |.+|++||||+||+||||+||||||||++|+|+
T Consensus 659 ~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~-GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDv 737 (1019)
T KOG0203|consen 659 AVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV 737 (1019)
T ss_pred EEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhc-CcEEEEeCCCcCCChhhcccccceeeccccchH
Confidence 68999999999999999999655 399999999999999999999 999999999999999999999999999999999
Q ss_pred HHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHhhHHHHhH
Q 001638 780 AKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAVQLLWVNMIMDTLGALA 859 (1039)
Q Consensus 780 ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~ala 859 (1039)
+|++||+||+||||++|+..+++||-+|+|.||.|.|.|+.|+..+...+++.+++.|.|+.++++|.+.+..|..||++
T Consensus 738 sKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiS 817 (1019)
T KOG0203|consen 738 SKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAIS 817 (1019)
T ss_pred HHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhh
Confidence 99999999999999999999999999999999999999999999999988888888999999999999999999999999
Q ss_pred hccCCCCccccCCCCCC-CCCCcchHHHHHHHHHH-HHHHHHHHHHHHHhcc---ccc-----cc------------CCC
Q 001638 860 LATEPPHEGLMQRPPIG-RNVHFITVTMWRNIIGQ-SIYQIIVLGVLTFCGK---KIL-----KL------------SGP 917 (1039)
Q Consensus 860 la~e~p~~~lm~~~P~~-~~~~li~~~~~~~i~~~-~i~q~~v~~~l~~~~~---~~~-----~~------------~~~ 917 (1039)
||+|+|+.|+|+|+|+. +++.++|+++...-.+| ++.|++..++-+|... .++ ++ ..+
T Consensus 818 LAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~Ds 897 (1019)
T KOG0203|consen 818 LAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDS 897 (1019)
T ss_pred HhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhh
Confidence 99999999999999998 88899998876444443 5667665554443211 111 11 000
Q ss_pred C-----------ccchhhHHHHHHHHHHHHHHHHHhccccccccccccchhHHHHHHHHHHHHH--HHHHHhhhhhhhcc
Q 001638 918 N-----------ATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVFIAVLVATVGF--QVIIVELLGTFATT 984 (1039)
Q Consensus 918 ~-----------~~~~~~T~~f~~~v~~qv~n~~~~r~~~~~~~f~~~~~n~~f~~~~~~~~~~--q~~~v~~~~~~~~~ 984 (1039)
+ -+...+|..|.++|.+|+++.+.|.+. +-++|..-++||++++.++..+.+ ++.+++.....+++
T Consensus 898 yGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTR-RnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~ 976 (1019)
T KOG0203|consen 898 YGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTR-RNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGM 976 (1019)
T ss_pred ccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcc-hhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhcc
Confidence 0 123457889999999999999998876 567888779999988777765444 44456667789999
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHhhhcc
Q 001638 985 VPLNWKLWLASVVIGAISMPFGVLLKCIPV 1014 (1039)
Q Consensus 985 ~~l~~~~w~~~i~~~~~~~~~~~~~k~i~~ 1014 (1039)
.|+.|.+|+..+..+++.++.+++.|++-+
T Consensus 977 ~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR 1006 (1019)
T KOG0203|consen 977 YPLKFQWWLVAFPFGILIFVYDEVRKLFIR 1006 (1019)
T ss_pred CCCCcEEEEecccceeeeeeHHHHHhHhhh
Confidence 999999999999999999999999998755
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-108 Score=1050.54 Aligned_cols=829 Identities=22% Similarity=0.303 Sum_probs=639.2
Q ss_pred cCCCccCCCCCCcHH----HHHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 001638 147 YGFNRYAEKPARSFW----MFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQS 222 (1039)
Q Consensus 147 ~G~N~~~~~~~~s~~----~~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~d~~~i~~~lllv~~v~a~~~~~~~ 222 (1039)
|..|.+...+ +++| ..+|+||+++.+++|++++++++++.+...+ ..+.++++++++.++++.++.++
T Consensus 1 ~~~N~i~tsk-Y~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~-------~~t~~~pL~~v~~~~~~~~~~ed 72 (1057)
T TIGR01652 1 FCSNKISTTK-YTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTY-------RGTSIVPLAFVLIVTAIKEAIED 72 (1057)
T ss_pred CCCCcccCcc-CcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCC-------ccHhHHhHHHHHHHHHHHHHHHH
Confidence 5678887666 4444 6789999999999999999999998775432 23456788888889999999999
Q ss_pred HHHHHHhcccCCceEEEEeC-CeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCc----eeEeccCCCCCCCccccCC
Q 001638 223 LQFKALDKEKKNLIVQVTRD-GYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYS----LTIDESSLSGETEPVHINR 297 (1039)
Q Consensus 223 ~~~~~l~~~~~~~~v~ViR~-G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~----l~VDES~LTGEs~pv~k~~ 297 (1039)
.++++.++..++..++|+|+ |++++++++||+|||+|.|++||+|||||+++++++ ++||||+|||||.|+.|..
T Consensus 73 ~~r~~~d~~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~ 152 (1057)
T TIGR01652 73 IRRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQA 152 (1057)
T ss_pred HHHHHhHHHHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeec
Confidence 99999999888899999997 899999999999999999999999999999999755 8999999999999998752
Q ss_pred -----------------------------------------------CCceeecccEEee-CCeEEEEEEeccchhhHHH
Q 001638 298 -----------------------------------------------DRPFLLSGTKVQD-GSGKMLVTSVGMRTEWGRL 329 (1039)
Q Consensus 298 -----------------------------------------------~~~~l~sGt~v~~-G~~~~~V~~vG~~T~~gki 329 (1039)
.++++++||.+.+ |++.++|++||.+|.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~--- 229 (1057)
T TIGR01652 153 LEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKL--- 229 (1057)
T ss_pred chhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhh---
Confidence 1257899999999 9999999999999955
Q ss_pred HHHhccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchh-------hhHHHHHHHHHHH
Q 001638 330 MVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSI-------DAMKLLNYFAIAV 402 (1039)
Q Consensus 330 ~~~~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~-------~~~~~~~~~~~ai 402 (1039)
+.+......++++++++++++...+..+.++++++++++... ... ......|+.. ....++..|..++
T Consensus 230 ~~n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~---~~~--~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~ 304 (1057)
T TIGR01652 230 MRNATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGI---WND--AHGKDLWYIRLDVSERNAAANGFFSFLTFL 304 (1057)
T ss_pred hhcCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHh---eec--ccCCCccceecCcccccchhHHHHHHHHHH
Confidence 455566677889999999999888776666555554443211 110 0011134321 1123444667788
Q ss_pred HHHHhhhcCchhHHHHHHHHHHH------HHhhcc----ccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcC
Q 001638 403 TIVVVAVPEGLPLAVTLSLAFAM------KKLMND----KALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICN 472 (1039)
Q Consensus 403 ~ilvvavP~~Lplavtl~la~~~------~~m~~~----~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~ 472 (1039)
.++..++|++||..++++++.++ .+|.++ +++||+++++|+||++++||+|||||||+|+|+++++++++
T Consensus 305 ~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g 384 (1057)
T TIGR01652 305 ILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAG 384 (1057)
T ss_pred HHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECC
Confidence 89999999999999999999998 788875 49999999999999999999999999999999999999987
Q ss_pred cccccccCC-------ccc-----------c-----------cC----CCCCHHHHHHHHHHHHhccCCceeecCCC---
Q 001638 473 EAKTIKSGD-------NEK-----------L-----------LK----PSVSDAVFNIFLQSIFQNTGSEVVKDKDG--- 516 (1039)
Q Consensus 473 ~~~~~~~~~-------~~~-----------~-----------~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--- 516 (1039)
..|.....+ ... . .. ..-..+....+..+++.|++..+..++++
T Consensus 385 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~ 464 (1057)
T TIGR01652 385 VSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEE 464 (1057)
T ss_pred EEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCc
Confidence 655321100 000 0 00 00001123344556677777655431222
Q ss_pred CccccCCchHHHHHHHHHHhCCCccc--------------ccccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcH
Q 001638 517 RTNILGTPTERAILEFGLILGGDSTF--------------HREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGAS 582 (1039)
Q Consensus 517 ~~~~~g~p~e~All~~a~~~g~~~~~--------------~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~ 582 (1039)
..+..|||+|.||+++|...|+.+.. ...++++++++||+|+||||||+++.++ +++.+|+||||
T Consensus 465 ~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~-~~~~l~~KGA~ 543 (1057)
T TIGR01652 465 ITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPD-GRIKLLCKGAD 543 (1057)
T ss_pred eEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCC-CeEEEEEeCcH
Confidence 23567999999999999999876542 2246899999999999999999999877 78999999999
Q ss_pred HHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCc-----------------------C
Q 001638 583 EIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKA-----------------------E 639 (1039)
Q Consensus 583 e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~-----------------------~ 639 (1039)
|.|+++|+.. +++.++.+.+.+++|+.+|+||+++|||.+++++.. .
T Consensus 544 e~il~~~~~~----------~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~ 613 (1057)
T TIGR01652 544 TVIFKRLSSG----------GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVA 613 (1057)
T ss_pred HHHHHHhhcc----------chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Confidence 9999999741 234567888999999999999999999999754210 1
Q ss_pred CCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCC------------------
Q 001638 640 SIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGG------------------ 701 (1039)
Q Consensus 640 ~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~------------------ 701 (1039)
+..|+|++|+|++|++||+||||+++|+.|++|||+|||+|||+.+||.+||++|||.+++.
T Consensus 614 ~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~ 693 (1057)
T TIGR01652 614 ESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEA 693 (1057)
T ss_pred HHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHH
Confidence 24689999999999999999999999999999999999999999999999999999986532
Q ss_pred -----------------------ceeeCcccccCCHH----HHHhhcccc--eEEEecChhhHHHHHHHHhhcCCCEEEE
Q 001638 702 -----------------------LAIEGTDFRSKNPQ----EMQELIPKL--QVMARSSPTDKYILVTQLRNVFKEVVAV 752 (1039)
Q Consensus 702 -----------------------~vi~G~~~~~~~~~----~~~~~~~~~--~v~ar~sP~~K~~~V~~l~~~~g~~V~~ 752 (1039)
++++|++++.+.++ ++.+++..+ .|+||++|+||.++|+.+|+..|++|+|
T Consensus 694 ~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~ 773 (1057)
T TIGR01652 694 AIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLA 773 (1057)
T ss_pred HHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEE
Confidence 36778877755443 345555554 4999999999999999999866899999
Q ss_pred EcCCccCHHHhhhCCcceeecCCCcH--HHHhccCEEeecCCchHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001638 753 TGNGTNDAPALHEADIGLAMGIAGTE--VAKENADVIIMDDNFTTIVTVA-RWGRSVYINIQKFVQFQLTVNIVALVINF 829 (1039)
Q Consensus 753 ~GDG~ND~~aL~~AdVGIamgi~gt~--~ak~~aDivl~dd~f~~i~~~i-~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~ 829 (1039)
+|||+||+|||++||||| |+.|+| .|+++||++|.+ |..+.+++ .+||++|+|++++++|++++|++.+++.+
T Consensus 774 iGDG~ND~~mlk~AdVGI--gi~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~ 849 (1057)
T TIGR01652 774 IGDGANDVSMIQEADVGV--GISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQF 849 (1057)
T ss_pred EeCCCccHHHHhhcCeee--EecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 557888 499999999985 99999987 88999999999999999999999999999
Q ss_pred HHHHHcCC---CchHHHHHHHHHHHhhHHHHhHhcc--CCCCccccCCCCC----CCCCCcchHHHHHHHHHHHHHHHHH
Q 001638 830 VAACITGS---APLTAVQLLWVNMIMDTLGALALAT--EPPHEGLMQRPPI----GRNVHFITVTMWRNIIGQSIYQIIV 900 (1039)
Q Consensus 830 ~~~~~~~~---~pl~~~qll~vnli~d~l~alala~--e~p~~~lm~~~P~----~~~~~li~~~~~~~i~~~~i~q~~v 900 (1039)
++.+++++ +|++++|++|+|+++|++|++++|. +++++++|.++|+ ++++++++...+..++..++||+++
T Consensus 850 ~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~i 929 (1057)
T TIGR01652 850 WYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLV 929 (1057)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 99887654 5789999999999999999999975 6778889999997 6677788877776677899999988
Q ss_pred HHHHHHhcccccc--cCCCCc-cchhhHHHHHHHHHHHHHHH-HHhccccccccccccchhHHHHHHHHHHHHHHH----
Q 001638 901 LGVLTFCGKKILK--LSGPNA-TLILNTFIFNSFVFCQVFNE-INSRDMEKINVFRGIFSSWVFIAVLVATVGFQV---- 972 (1039)
Q Consensus 901 ~~~l~~~~~~~~~--~~~~~~-~~~~~T~~f~~~v~~qv~n~-~~~r~~~~~~~f~~~~~n~~f~~~~~~~~~~q~---- 972 (1039)
++++.+.....-. .+|... .....+++|.++++...+.. +.++.++ ++.++.+.+++++.+
T Consensus 930 i~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wt-----------~~~~~~~~~S~~~~~~~~~ 998 (1057)
T TIGR01652 930 IFFFPMFAYILGDFVSSGSLDDFSSVGVIVFTALVVIVNLKIALEINRWN-----------WISLITIWGSILVWLIFVI 998 (1057)
T ss_pred HHHHHHHHHcCCccccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhHhH-----------HHHHHHHHHHHHHHHHHHH
Confidence 8776554322111 122211 23345666666665443322 2222221 111111222222222
Q ss_pred HHHhh------hhhhhcccCCChHHHHHHHHHHHHHHHHHHHHhhhccCCcc
Q 001638 973 IIVEL------LGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVGTCT 1018 (1039)
Q Consensus 973 ~~v~~------~~~~~~~~~l~~~~w~~~i~~~~~~~~~~~~~k~i~~~~~~ 1018 (1039)
++..+ .+.+. ..--++.+|+.++++.++++++..+.|.+.....|
T Consensus 999 ~~~~~~~~~~~~~~~~-~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P 1049 (1057)
T TIGR01652 999 VYSSIFPSPAFYKAAP-RVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRP 1049 (1057)
T ss_pred HHHhhcccccHHHHHH-HHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 21111 11122 12246889999999999999999999999887777
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-100 Score=970.84 Aligned_cols=835 Identities=20% Similarity=0.268 Sum_probs=626.0
Q ss_pred hcCCCccCCCCCCcHHHH----HHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 001638 146 VYGFNRYAEKPARSFWMF----VWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQ 221 (1039)
Q Consensus 146 ~~G~N~~~~~~~~s~~~~----~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~d~~~i~~~lllv~~v~a~~~~~~ 221 (1039)
.|..|.+...+ +++|.| +|+||+.+.++++++++++++++.+...+ ..+.+++++++++++++.++.+
T Consensus 86 ~f~~N~i~TsK-Yt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~-------~~t~~~PL~~vl~v~~ike~~E 157 (1178)
T PLN03190 86 EFAGNSIRTAK-YSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFG-------RGASILPLAFVLLVTAVKDAYE 157 (1178)
T ss_pred cCCCCeeeccc-cccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCC-------cchHHHHHHHHHHHHHHHHHHH
Confidence 68899998765 666665 58999999999999999999988775543 2456789999999999999999
Q ss_pred HHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCc----eeEeccCCCCCCCccccCC
Q 001638 222 SLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYS----LTIDESSLSGETEPVHINR 297 (1039)
Q Consensus 222 ~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~----l~VDES~LTGEs~pv~k~~ 297 (1039)
+.++++.++..++..++|+|+|.++++++.||+|||+|.|++||+|||||+++++++ ++||||+|||||.|+.|..
T Consensus 158 d~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~ 237 (1178)
T PLN03190 158 DWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYA 237 (1178)
T ss_pred HHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecc
Confidence 999999999999999999999999999999999999999999999999999998543 7999999999999998751
Q ss_pred --------------------------------------------CCceeecccEEeeC-CeEEEEEEeccchhhHHHHHH
Q 001638 298 --------------------------------------------DRPFLLSGTKVQDG-SGKMLVTSVGMRTEWGRLMVT 332 (1039)
Q Consensus 298 --------------------------------------------~~~~l~sGt~v~~G-~~~~~V~~vG~~T~~gki~~~ 332 (1039)
.++++++||.+.+. ++.|+|++||++| |++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dT---K~~~N 314 (1178)
T PLN03190 238 KQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRET---KAMLN 314 (1178)
T ss_pred cchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhh---hHhhc
Confidence 13456777777764 6999999999999 67777
Q ss_pred hccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchh--------------h-hHHHHHH
Q 001638 333 LSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSI--------------D-AMKLLNY 397 (1039)
Q Consensus 333 ~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~--------------~-~~~~~~~ 397 (1039)
......+.+++++++|++...+..+.+++++++.++... |.........+..|+.. . .......
T Consensus 315 ~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~-~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (1178)
T PLN03190 315 NSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAV-WLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFT 393 (1178)
T ss_pred CCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh-hhccccccccccccccccccccccccccccchhhHHHHHH
Confidence 777778899999999999887776666555554443211 11100000001112210 0 0111222
Q ss_pred HHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccc----------cccccchhhhcccceeEEEecCcCccccCceEEEE
Q 001638 398 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDK----------ALVRHLSACETMGSASCICTDKTGTLTTNHMVVTK 467 (1039)
Q Consensus 398 ~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~----------ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~ 467 (1039)
|...+.++-..+|++|++.+.+.....+..|.+|. +.||+.+.+|+||++++||+|||||||+|+|++++
T Consensus 394 f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~ 473 (1178)
T PLN03190 394 FLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQC 473 (1178)
T ss_pred HHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEE
Confidence 33445566688999999999999977777777665 78999999999999999999999999999999999
Q ss_pred EEEcCcccccccCC-------------cc-----cccC----------CCCC---HHHHHHHHHHHHhccCCceee--cC
Q 001638 468 LWICNEAKTIKSGD-------------NE-----KLLK----------PSVS---DAVFNIFLQSIFQNTGSEVVK--DK 514 (1039)
Q Consensus 468 ~~~~~~~~~~~~~~-------------~~-----~~~~----------~~~~---~~~~~~l~~~~~~~~~~~~~~--~~ 514 (1039)
+++++..|+..... .. .... .... ......++.+++.||+..+.. +.
T Consensus 474 ~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~ 553 (1178)
T PLN03190 474 ASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDT 553 (1178)
T ss_pred EEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCC
Confidence 99987655321000 00 0000 0000 012234556677777765532 11
Q ss_pred -CC----CccccCCchHHHHHHHHHHhCC------------CcccccccccEEEEecCCCCCCceEEEEEcCCCCeEEEE
Q 001638 515 -DG----RTNILGTPTERAILEFGLILGG------------DSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVF 577 (1039)
Q Consensus 515 -~~----~~~~~g~p~e~All~~a~~~g~------------~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~ 577 (1039)
++ ..+..+||+|.||+.+|.++|+ +....+.+|++++++||+|+||||||+++.++ +.+.+|
T Consensus 554 ~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~-~~~~l~ 632 (1178)
T PLN03190 554 SDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPD-KTVKVF 632 (1178)
T ss_pred CCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCC-CcEEEE
Confidence 11 1256669999999999999997 44445678999999999999999999999876 789999
Q ss_pred EeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCc-------------------
Q 001638 578 CKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKA------------------- 638 (1039)
Q Consensus 578 ~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~------------------- 638 (1039)
+|||||.|+++|++.. +++.++.+.+.+++|+++|||||++|||++++++.+
T Consensus 633 ~KGA~e~il~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~ 703 (1178)
T PLN03190 633 VKGADTSMFSVIDRSL---------NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAAL 703 (1178)
T ss_pred EecCcHHHHHhhcccc---------cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHH
Confidence 9999999999998542 234567788999999999999999999999653211
Q ss_pred ----CCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCC--------------
Q 001638 639 ----ESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG-------------- 700 (1039)
Q Consensus 639 ----~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~-------------- 700 (1039)
.+..|+||+++|+++++||+|++++++|+.|++|||+|||+|||+.+||.+||++|||.+++
T Consensus 704 l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~ 783 (1178)
T PLN03190 704 LRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESC 783 (1178)
T ss_pred HHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhH
Confidence 13468999999999999999999999999999999999999999999999999999997542
Q ss_pred -----------------------------------CceeeCcccccCCH----HHHHhhcccce--EEEecChhhHHHHH
Q 001638 701 -----------------------------------GLAIEGTDFRSKNP----QEMQELIPKLQ--VMARSSPTDKYILV 739 (1039)
Q Consensus 701 -----------------------------------~~vi~G~~~~~~~~----~~~~~~~~~~~--v~ar~sP~~K~~~V 739 (1039)
.++++|.++..+.+ +++.+++.++. |+||++|+||.++|
T Consensus 784 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV 863 (1178)
T PLN03190 784 RKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIV 863 (1178)
T ss_pred HHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHH
Confidence 14667777766654 45666666554 79999999999999
Q ss_pred HHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcH--HHHhccCEEeecCCchHHHHHH-HHhHHHHHHHHHHHHH
Q 001638 740 TQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTE--VAKENADVIIMDDNFTTIVTVA-RWGRSVYINIQKFVQF 816 (1039)
Q Consensus 740 ~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~--~ak~~aDivl~dd~f~~i~~~i-~~gR~~~~nI~k~i~f 816 (1039)
+.+|+..+++|+|+|||+||+|||++||||| |++|+| .|+.+||+.|.+ |..+.+++ .|||+.|.|+.+.++|
T Consensus 864 ~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI--GIsG~EG~qA~~aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i~y 939 (1178)
T PLN03190 864 ALVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQEGRQAVMASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMILY 939 (1178)
T ss_pred HHHHhcCCcEEEEECCCcchHHHHHhcCeee--eecCchhHHHHHhhccchhh--hHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 9999875689999999999999999999999 888999 699999999986 99999985 6899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCc---hHHHHHHHHHHHhhHHHHhHhc-c--CCCCccccCCCCC---CCCCCcchHHHH
Q 001638 817 QLTVNIVALVINFVAACITGSAP---LTAVQLLWVNMIMDTLGALALA-T--EPPHEGLMQRPPI---GRNVHFITVTMW 887 (1039)
Q Consensus 817 ~l~~Ni~~i~~~~~~~~~~~~~p---l~~~qll~vnli~d~l~alala-~--e~p~~~lm~~~P~---~~~~~li~~~~~ 887 (1039)
.+++|++..+++|++++++++++ ++.+-+..+|++++++|.++++ . +-|.+.+++.|-. +++...++...+
T Consensus 940 ~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F 1019 (1178)
T PLN03190 940 NFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLF 1019 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHH
Confidence 99999999999999999987765 4677899999999999999986 2 4455555555543 455667776666
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccccCCCCccchhhHHHHHHHHHHHHHH-HHHhccccccccccccchhHHHHHHHHH
Q 001638 888 RNIIGQSIYQIIVLGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFN-EINSRDMEKINVFRGIFSSWVFIAVLVA 966 (1039)
Q Consensus 888 ~~i~~~~i~q~~v~~~l~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~qv~n-~~~~r~~~~~~~f~~~~~n~~f~~~~~~ 966 (1039)
..|+..|+||+++++++.++...-...++ ....++.+.+.|+..-+. .+.+++++..++ ..+++.+++
T Consensus 1020 ~~w~~~~i~qs~iiff~~~~~~~~~~~~~----~~~~~~~~~~~v~~vnl~i~~~~~~wt~~~~-------~~i~~Si~~ 1088 (1178)
T PLN03190 1020 WLTMIDTLWQSAVVFFVPLFAYWASTIDG----SSIGDLWTLAVVILVNLHLAMDIIRWNWITH-------AAIWGSIVA 1088 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcCc----eeEhHhhhhHHHHHHHHHHHHHHhhhhHHHH-------HHHHHHHHH
Confidence 66777899999988877654211001111 112233333333322111 222333221111 011122222
Q ss_pred HHHHHHHHH--hh---hhhhhcccCCChHHHHHHHHHHHHHHHHHHHHhhhccCCcc
Q 001638 967 TVGFQVIIV--EL---LGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVGTCT 1018 (1039)
Q Consensus 967 ~~~~q~~~v--~~---~~~~~~~~~l~~~~w~~~i~~~~~~~~~~~~~k~i~~~~~~ 1018 (1039)
.+++.+++. ++ .+.++.+ --++.+|+..+++.+++++++.++|++.....|
T Consensus 1089 ~~i~~~~~~~~~~~~~~~~~~~~-~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P 1144 (1178)
T PLN03190 1089 TFICVIVIDAIPTLPGYWAIFHI-AKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTP 1144 (1178)
T ss_pred HHHHHHHHHhcccchhHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 222222221 10 1122221 236889999999999999999999998876666
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-93 Score=853.27 Aligned_cols=575 Identities=24% Similarity=0.362 Sum_probs=458.3
Q ss_pred HHHhhHHHHHHHHHHHHHhhccCCCC-----CCCCcccchhHHHHHHHHHHHHHHHHH----HHHHHHHHHHhcccCCce
Q 001638 166 EALHDLTLIILMICAAVSIGVGIPTE-----GWPDGVYDGLGIVLSILLVVIVTAVSD----YKQSLQFKALDKEKKNLI 236 (1039)
Q Consensus 166 ~~~~~~~~~il~v~a~ls~~~~~~~~-----~~~~~~~d~~~i~~~lllv~~v~a~~~----~~~~~~~~~l~~~~~~~~ 236 (1039)
.++++|..++|+++++++++++...+ +| .+++++.|++.+++.++++.+.+ ++.+++.+.|.+...+.+
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~--~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~ 105 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESV--SRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMK 105 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccc--cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcce
Confidence 56789999999999999998876422 22 23567778777888888887774 555555666666544435
Q ss_pred EE-EEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCceeEeccCCCCCCCccccCCC---CceeecccEEeeCC
Q 001638 237 VQ-VTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRD---RPFLLSGTKVQDGS 312 (1039)
Q Consensus 237 v~-ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGEs~pv~k~~~---~~~l~sGt~v~~G~ 312 (1039)
++ |.|||++++|++++|+|||+|.+++||+|||||++++|+. .||||+|||||.|+.|..+ ++ +|+||.|.+|+
T Consensus 106 a~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~-V~aGT~v~~G~ 183 (673)
T PRK14010 106 ARRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDN-VIGGTSVASDW 183 (673)
T ss_pred EEEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCe-eecCceeecce
Confidence 65 7799999999999999999999999999999999999976 9999999999999999876 56 99999999999
Q ss_pred eEEEEEEeccchhhHHHHHHhccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhH
Q 001638 313 GKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAM 392 (1039)
Q Consensus 313 ~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~ 392 (1039)
++++|+++|.+|++||+.+++++++.++||+|..+..+...+.. .+++++++... ... + .
T Consensus 184 ~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~i-----i~l~~~~~~~~--~~~--------~-----~ 243 (673)
T PRK14010 184 LEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTI-----IFLVVILTMYP--LAK--------F-----L 243 (673)
T ss_pred EEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhH-----HHHHHHHHHHH--HHh--------h-----c
Confidence 99999999999999999999999898999999776655433321 11222211110 000 0 0
Q ss_pred HHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcC
Q 001638 393 KLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICN 472 (1039)
Q Consensus 393 ~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~ 472 (1039)
.+...+...++++|.+|||+||.+++++++.++++|+|+|+++|+++++|+||++|+||||||||||+|++.+.++...+
T Consensus 244 ~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~ 323 (673)
T PRK14010 244 NFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVK 323 (673)
T ss_pred cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCC
Confidence 11234567788888899999999999999999999999999999999999999999999999999999887776654211
Q ss_pred cccccccCCcccccCCCCCHHHHHHHHHHHHhccCCceeecCCCCccccCCchHHHHHHHHHHhCCCcccccccccEEEE
Q 001638 473 EAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKV 552 (1039)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~ 552 (1039)
.. +. .+++ .....|+.. ..||+++|+++++.+.+.+.... ..+.
T Consensus 324 ~~----------------~~--~~ll-~~a~~~~~~------------s~~P~~~AIv~~a~~~~~~~~~~-----~~~~ 367 (673)
T PRK14010 324 SS----------------SF--ERLV-KAAYESSIA------------DDTPEGRSIVKLAYKQHIDLPQE-----VGEY 367 (673)
T ss_pred Cc----------------cH--HHHH-HHHHHhcCC------------CCChHHHHHHHHHHHcCCCchhh-----hcce
Confidence 10 11 1222 222222221 13899999999998776543221 1235
Q ss_pred ecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEec
Q 001638 553 EPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDI 632 (1039)
Q Consensus 553 ~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l 632 (1039)
+||++++|+|++.++ ++ .+.||++|.++++|+. +|...+. .+.+.+++++++|+|+++++
T Consensus 368 ~pF~~~~k~~gv~~~----g~--~i~kGa~~~il~~~~~----~g~~~~~------~~~~~~~~~a~~G~~~l~v~---- 427 (673)
T PRK14010 368 IPFTAETRMSGVKFT----TR--EVYKGAPNSMVKRVKE----AGGHIPV------DLDALVKGVSKKGGTPLVVL---- 427 (673)
T ss_pred eccccccceeEEEEC----CE--EEEECCHHHHHHHhhh----cCCCCch------HHHHHHHHHHhCCCeEEEEE----
Confidence 899999999998753 22 4569999999999984 2222221 25566778999999999887
Q ss_pred CCCCCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccC
Q 001638 633 KGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSK 712 (1039)
Q Consensus 633 ~~~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~ 712 (1039)
.|++++|+++++||+|||++++|++||++||+++|+||||+.||++||+++||..
T Consensus 428 -----------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~-------------- 482 (673)
T PRK14010 428 -----------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR-------------- 482 (673)
T ss_pred -----------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce--------------
Confidence 3678999999999999999999999999999999999999999999999999975
Q ss_pred CHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCC
Q 001638 713 NPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDN 792 (1039)
Q Consensus 713 ~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~ 792 (1039)
++||++|+||.++|+.+|++ |++|+|||||+||+|||++|||||||| +|||+||++||+|++|||
T Consensus 483 -------------v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ 547 (673)
T PRK14010 483 -------------FVAECKPEDKINVIREEQAK-GHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSN 547 (673)
T ss_pred -------------EEcCCCHHHHHHHHHHHHhC-CCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCC
Confidence 99999999999999999999 999999999999999999999999999 999999999999999999
Q ss_pred chHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------------CCCchHHHH-HHHHH-HHhhHHHHh
Q 001638 793 FTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACIT------------GSAPLTAVQ-LLWVN-MIMDTLGAL 858 (1039)
Q Consensus 793 f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~------------~~~pl~~~q-ll~vn-li~d~l~al 858 (1039)
|++|++++++||++|.|++|++.|.++.|+..++..+.+.+.. ..+|-+++- -+.+| +|.-.|..|
T Consensus 548 ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (673)
T PRK14010 548 PTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFMAAMPAMNHLNIMHLHSPESAVLSALIFNALIIVLLIPI 627 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHHHHhcccchhhccccCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988776555443332 246666653 23344 344444455
Q ss_pred Hh
Q 001638 859 AL 860 (1039)
Q Consensus 859 al 860 (1039)
||
T Consensus 628 ~~ 629 (673)
T PRK14010 628 AM 629 (673)
T ss_pred Hh
Confidence 55
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-91 Score=839.41 Aligned_cols=581 Identities=24% Similarity=0.328 Sum_probs=464.2
Q ss_pred HHHHhhHHHHHHHHHHHHHhhccCCCC------CCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEE
Q 001638 165 WEALHDLTLIILMICAAVSIGVGIPTE------GWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQ 238 (1039)
Q Consensus 165 ~~~~~~~~~~il~v~a~ls~~~~~~~~------~~~~~~~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ 238 (1039)
..+|+|+++++|++++++++++++... .+..+|..++.+++.+++..+++++.+++.+++.+.|.+...+..++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 468899999999999999999875421 12234444445555555555666678888888888888766556799
Q ss_pred EEeCCe-EEEEEcCCcccCcEEEEcCCCcccccEEEEeeCceeEeccCCCCCCCccccCCCC--ceeecccEEeeCCeEE
Q 001638 239 VTRDGY-RKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDR--PFLLSGTKVQDGSGKM 315 (1039)
Q Consensus 239 ViR~G~-~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGEs~pv~k~~~~--~~l~sGt~v~~G~~~~ 315 (1039)
|+|||+ +++|++++|++||+|.+++||+|||||++++|.. .||||+|||||.|+.|..++ +.+|+||.|.+|++++
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~a-~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i 186 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVI 186 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEccE-EEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEE
Confidence 999988 8999999999999999999999999999999975 99999999999999998653 3599999999999999
Q ss_pred EEEEeccchhhHHHHHHhccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHH
Q 001638 316 LVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLL 395 (1039)
Q Consensus 316 ~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~ 395 (1039)
+|+++|.+|++||+.+++++++.++||+|..++.+...+..+.+++++..+. +.++.+ ..
T Consensus 187 ~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~---~~~~~g---------------~~-- 246 (679)
T PRK01122 187 RITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPP---FAAYSG---------------GA-- 246 (679)
T ss_pred EEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHH---HHHHhC---------------ch--
Confidence 9999999999999999999999999999988887766554332222111111 111100 01
Q ss_pred HHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCccc
Q 001638 396 NYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAK 475 (1039)
Q Consensus 396 ~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~ 475 (1039)
..+..++++++++|||+|+.+++++...++++|+|+|+++|+++++|+||++|+||||||||||+|+|++++++..+..
T Consensus 247 ~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~- 325 (679)
T PRK01122 247 LSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV- 325 (679)
T ss_pred HHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC-
Confidence 1467789999999999999999999999999999999999999999999999999999999999999999998753221
Q ss_pred ccccCCcccccCCCCCHHHHHHHHHHHHhccCCceeecCCCCccccCCchHHHHHHHHHH-hCCCcccccccccEEEEec
Q 001638 476 TIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLI-LGGDSTFHREESAIVKVEP 554 (1039)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~-~g~~~~~~~~~~~il~~~p 554 (1039)
+++ .++..++.++... .||..+|+++++.+ .+.+ ..+..++..+.+|
T Consensus 326 ---------------~~~---~ll~~a~~~s~~s------------~hP~~~AIv~~a~~~~~~~--~~~~~~~~~~~~p 373 (679)
T PRK01122 326 ---------------TEE---ELADAAQLSSLAD------------ETPEGRSIVVLAKQRFNLR--ERDLQSLHATFVP 373 (679)
T ss_pred ---------------CHH---HHHHHHHHhcCCC------------CCchHHHHHHHHHhhcCCC--chhhccccceeEe
Confidence 111 1223333333221 26888999999876 3432 2222356778899
Q ss_pred CCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCC
Q 001638 555 FNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKG 634 (1039)
Q Consensus 555 F~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~ 634 (1039)
|++++|+|++.++ + +.++||++|.+++.|+. +|... .+++.+.+++++++|+|++++|+
T Consensus 374 F~s~~~~~gv~~~----g--~~~~kGa~e~il~~~~~----~g~~~------~~~~~~~~~~~a~~G~~~l~va~----- 432 (679)
T PRK01122 374 FSAQTRMSGVDLD----G--REIRKGAVDAIRRYVES----NGGHF------PAELDAAVDEVARKGGTPLVVAE----- 432 (679)
T ss_pred ecCcCceEEEEEC----C--EEEEECCHHHHHHHHHh----cCCcC------hHHHHHHHHHHHhCCCcEEEEEE-----
Confidence 9999998887542 3 47899999999999964 22221 24567788899999999999993
Q ss_pred CCCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCH
Q 001638 635 NHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNP 714 (1039)
Q Consensus 635 ~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~ 714 (1039)
|++++|+++++||+|||++++|++||++||+++|+||||+.||++||+++||.+
T Consensus 433 ----------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~---------------- 486 (679)
T PRK01122 433 ----------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD---------------- 486 (679)
T ss_pred ----------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE----------------
Confidence 578999999999999999999999999999999999999999999999999975
Q ss_pred HHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCch
Q 001638 715 QEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFT 794 (1039)
Q Consensus 715 ~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~ 794 (1039)
++||++|+||.++|+.+|++ |++|+|||||+||+|||++|||||||| +|||+||++||+|++||||+
T Consensus 487 -----------v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s 553 (679)
T PRK01122 487 -----------FLAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPT 553 (679)
T ss_pred -----------EEccCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHH
Confidence 99999999999999999999 999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHc---------CCCchHHHH-HHHHH-HHhhHHHHhH
Q 001638 795 TIVTVARWGRSVYINIQKFVQFQLTVNIV----ALVINFVAACIT---------GSAPLTAVQ-LLWVN-MIMDTLGALA 859 (1039)
Q Consensus 795 ~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~----~i~~~~~~~~~~---------~~~pl~~~q-ll~vn-li~d~l~ala 859 (1039)
+|+++++|||+..-.--....|++. |-+ +++.+++.+.+- ..+|-+++- -+.+| +|.-.|..||
T Consensus 554 ~Iv~av~~GR~~~~tr~~~~~f~~~-n~~~~~~~i~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (679)
T PRK01122 554 KLIEVVEIGKQLLMTRGALTTFSIA-NDVAKYFAIIPAMFAATYPQLNALNIMHLHSPQSAILSALIFNALIIVALIPLA 632 (679)
T ss_pred HHHHHHHHHHHHHhhhHhhhhhhHH-HHHHHHHHHHHHHHHhhCccccccccccCCChHHHHHHHHHHHHHHHHHhHHHH
Confidence 9999999999999776677888877 444 333333333321 245666553 23344 3444444555
Q ss_pred h
Q 001638 860 L 860 (1039)
Q Consensus 860 l 860 (1039)
|
T Consensus 633 ~ 633 (679)
T PRK01122 633 L 633 (679)
T ss_pred h
Confidence 5
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-87 Score=803.67 Aligned_cols=546 Identities=24% Similarity=0.350 Sum_probs=451.2
Q ss_pred HHHHhhHHHHHHHHHHHHHhhccCCC--C---CCCCcccch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCce
Q 001638 165 WEALHDLTLIILMICAAVSIGVGIPT--E---GWPDGVYDG---LGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLI 236 (1039)
Q Consensus 165 ~~~~~~~~~~il~v~a~ls~~~~~~~--~---~~~~~~~d~---~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~ 236 (1039)
..||+|+.+++|++++++|+++++.. . +...+||++ +.+++.+++..+++++.+++.++++++|.+...+..
T Consensus 27 ~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~ 106 (675)
T TIGR01497 27 KAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTF 106 (675)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 36789999999999999999987631 1 122358875 334555666677778899999999999988766667
Q ss_pred EEEEe-CCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCceeEeccCCCCCCCccccCCCCc--eeecccEEeeCCe
Q 001638 237 VQVTR-DGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDRP--FLLSGTKVQDGSG 313 (1039)
Q Consensus 237 v~ViR-~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGEs~pv~k~~~~~--~l~sGt~v~~G~~ 313 (1039)
++|+| ||++++|++++|+|||+|.+++||+|||||++++|+ +.||||+|||||.|+.|+.++. .+++||.|.+|++
T Consensus 107 a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~ 185 (675)
T TIGR01497 107 AKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-ASVDESAITGESAPVIKESGGDFASVTGGTRILSDWL 185 (675)
T ss_pred EEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-EEEEcccccCCCCceeecCCCCcceeecCcEEEeeEE
Confidence 88885 899999999999999999999999999999999996 5999999999999999987653 4999999999999
Q ss_pred EEEEEEeccchhhHHHHHHhccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHH
Q 001638 314 KMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMK 393 (1039)
Q Consensus 314 ~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~ 393 (1039)
+++|+++|.+|++|++.+++++++.++||+|..++.+...+..+.+++ ++.++. ... |.. .
T Consensus 186 ~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~---~~~~~~----~~~--------~~~---~- 246 (675)
T TIGR01497 186 VVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLV---TATLWP----FAA--------YGG---N- 246 (675)
T ss_pred EEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHH---HHHHHH----HHH--------hcC---h-
Confidence 999999999999999999999988999999988887765544322211 111111 100 110 0
Q ss_pred HHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCc
Q 001638 394 LLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNE 473 (1039)
Q Consensus 394 ~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~ 473 (1039)
...+..++++++++|||+|+...+.....+++||+++|+++|+++++|+||++|+||||||||||+|+|++++++..+.
T Consensus 247 -~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~ 325 (675)
T TIGR01497 247 -AISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG 325 (675)
T ss_pred -hHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCC
Confidence 1135667899999999988888877777899999999999999999999999999999999999999999999875321
Q ss_pred ccccccCCcccccCCCCCHHHHHHHHHHHHhccCCceeecCCCCccccCCchHHHHHHHHHHhCCCcccccccccEEEEe
Q 001638 474 AKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVE 553 (1039)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~ 553 (1039)
. +++ .++..++.++.. ..||.++|+++++.+.|.+... ..++..+..
T Consensus 326 ~----------------~~~---~ll~~aa~~~~~------------s~hP~a~Aiv~~a~~~~~~~~~--~~~~~~~~~ 372 (675)
T TIGR01497 326 V----------------DEK---TLADAAQLASLA------------DDTPEGKSIVILAKQLGIREDD--VQSLHATFV 372 (675)
T ss_pred C----------------cHH---HHHHHHHHhcCC------------CCCcHHHHHHHHHHHcCCCccc--cccccceEE
Confidence 1 111 122223333221 1379999999999887654332 233556789
Q ss_pred cCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecC
Q 001638 554 PFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIK 633 (1039)
Q Consensus 554 pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~ 633 (1039)
||++.+|+|++.+. + + +.++||++|.+++.|+. +|...+ +.+.+.+++++++|+|++++|+
T Consensus 373 pf~~~~~~sg~~~~--~-g--~~~~kGa~e~i~~~~~~----~g~~~~------~~~~~~~~~~a~~G~r~l~va~---- 433 (675)
T TIGR01497 373 EFTAQTRMSGINLD--N-G--RMIRKGAVDAIKRHVEA----NGGHIP------TDLDQAVDQVARQGGTPLVVCE---- 433 (675)
T ss_pred EEcCCCcEEEEEEe--C-C--eEEEECCHHHHHHHHHh----cCCCCc------HHHHHHHHHHHhCCCeEEEEEE----
Confidence 99999888876543 2 3 46899999999998863 222211 3467778899999999999995
Q ss_pred CCCCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCC
Q 001638 634 GNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKN 713 (1039)
Q Consensus 634 ~~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~ 713 (1039)
+.+++|+++++||+|||++++|++|+++|++++|+|||+..+|.++|+++||.+
T Consensus 434 -----------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~--------------- 487 (675)
T TIGR01497 434 -----------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD--------------- 487 (675)
T ss_pred -----------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE---------------
Confidence 358999999999999999999999999999999999999999999999999976
Q ss_pred HHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCc
Q 001638 714 PQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNF 793 (1039)
Q Consensus 714 ~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f 793 (1039)
++||++|+||.++|+.+|++ |+.|+|+|||+||+|||++|||||||| +|+++||++||++++||||
T Consensus 488 ------------v~a~~~PedK~~~v~~lq~~-g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~ 553 (675)
T TIGR01497 488 ------------FIAEATPEDKIALIRQEQAE-GKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDP 553 (675)
T ss_pred ------------EEcCCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCH
Confidence 99999999999999999999 999999999999999999999999999 9999999999999999999
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 001638 794 TTIVTVARWGRSVYINIQKFVQFQLTVNIV 823 (1039)
Q Consensus 794 ~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~ 823 (1039)
++|+++++|||+++-+......|.+..++.
T Consensus 554 s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~ 583 (675)
T TIGR01497 554 TKLIEVVHIGKQLLITRGALTTFSIANDVA 583 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHHheeeecccHH
Confidence 999999999999999999999999987654
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-86 Score=773.56 Aligned_cols=776 Identities=22% Similarity=0.344 Sum_probs=576.0
Q ss_pred CCCCCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCcccchhHHHHHHHHH
Q 001638 131 LPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLV 210 (1039)
Q Consensus 131 ~~~GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~d~~~i~~~lllv 210 (1039)
..+||+..++..|+..||.|.+..+. ++.+.++.++.-+|+...-.++.++...-. .+|.+..|++.-+.-
T Consensus 157 ~~~gL~~~~~~~r~~iyG~N~i~l~i-k~i~~iLv~EvL~PfYlFQ~fSv~lW~~d~--------Y~~YA~cI~iisv~S 227 (1140)
T KOG0208|consen 157 VSNGLERQEIIDRRIIYGRNVISLPI-KSISQILVKEVLNPFYLFQAFSVALWLADS--------YYYYAFCIVIISVYS 227 (1140)
T ss_pred ccCCccHHHHHhHHhhcCCceeeeec-ccHHHHHHHhccchHHHHHhHHhhhhhccc--------chhhhhHHHHHHHHH
Confidence 36899999999999999999998765 789999988888888776655554443321 233334443333333
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcC-CCcccccEEEEeeCceeEeccCCCCC
Q 001638 211 VIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSI-GDQVPADGILISGYSLTIDESSLSGE 289 (1039)
Q Consensus 211 ~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~-Gd~VPaDgill~g~~l~VDES~LTGE 289 (1039)
++.+.+..-+++++.+++.+ ....|+|+|||.+++|.++|||||||+.+.+ |-..|||++|++|++ .||||+||||
T Consensus 228 i~~sv~e~r~qs~rlr~mv~--~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~c-ivNEsmLTGE 304 (1140)
T KOG0208|consen 228 IVLSVYETRKQSIRLRSMVK--FTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGDC-IVNESMLTGE 304 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhc--CCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCcE-EeecccccCC
Confidence 34444444455555555543 2358999999999999999999999999998 899999999999976 7999999999
Q ss_pred CCccccCC------------------CCceeecccEEee------CCeEEEEEEeccchhhHHHHHHhccCCCCCCchHH
Q 001638 290 TEPVHINR------------------DRPFLLSGTKVQD------GSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQV 345 (1039)
Q Consensus 290 s~pv~k~~------------------~~~~l~sGt~v~~------G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~ 345 (1039)
|.|+.|.+ ..+++|.||++.+ |.+.+.|+.||-+|..|++.+++-.++ +++++.
T Consensus 305 SVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPk--P~~fkf 382 (1140)
T KOG0208|consen 305 SVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPK--PVNFKF 382 (1140)
T ss_pred cccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCC--CcccHH
Confidence 99999973 2457999999985 778999999999999999999998743 344444
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHH
Q 001638 346 KLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAM 425 (1039)
Q Consensus 346 ~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~ 425 (1039)
..|.+ .+.....++|++.|+...+.+... ..++-..++.++-++.+.+|.+||.++++...++.
T Consensus 383 yrds~--~fi~~l~~ia~~gfiy~~i~l~~~--------------g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~ 446 (1140)
T KOG0208|consen 383 YRDSF--KFILFLVIIALIGFIYTAIVLNLL--------------GVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQ 446 (1140)
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHhHhHHHc--------------CCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHH
Confidence 33433 222233344445554433322211 12234567789999999999999999999999999
Q ss_pred HHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccc------cCCcccc---cCCCCCHHHHH
Q 001638 426 KKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIK------SGDNEKL---LKPSVSDAVFN 496 (1039)
Q Consensus 426 ~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~------~~~~~~~---~~~~~~~~~~~ 496 (1039)
+|+.|+|+.+-+++.+...|+++++|||||||||++.+.+..+..-....... ..+.... +...-+.....
T Consensus 447 ~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 526 (1140)
T KOG0208|consen 447 SRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMG 526 (1140)
T ss_pred HHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchH
Confidence 99999999999999999999999999999999999999998887633210000 0000000 00000000123
Q ss_pred HHHHHHHhccCCceeecCCCCccccCCchHHHHHHHHHHh--------------C------CCc-----cccc----ccc
Q 001638 497 IFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLIL--------------G------GDS-----TFHR----EES 547 (1039)
Q Consensus 497 ~l~~~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~--------------g------~~~-----~~~~----~~~ 547 (1039)
.+..+++.||+-.... ....|+|.|.-+.+.-... + ++. .... +++
T Consensus 527 ~~~~a~atCHSL~~v~-----g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~ 601 (1140)
T KOG0208|consen 527 NLVAAMATCHSLTLVD-----GTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEI 601 (1140)
T ss_pred HHHHHHhhhceeEEeC-----CeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcce
Confidence 4556667777543322 1456677665555431100 0 000 0000 157
Q ss_pred cEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEE
Q 001638 548 AIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCL 627 (1039)
Q Consensus 548 ~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~ 627 (1039)
.+++.+||+|+-+||||+++.+++.+..+|+|||||.|.+.|+. + ...+.+++.++.|+.+|+|++|+
T Consensus 602 si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p------~------tvP~dy~evl~~Yt~~GfRVIAl 669 (1140)
T KOG0208|consen 602 SIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP------E------TVPADYQEVLKEYTHQGFRVIAL 669 (1140)
T ss_pred EEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc------c------cCCccHHHHHHHHHhCCeEEEEE
Confidence 79999999999999999999998789999999999999999974 1 22356889999999999999999
Q ss_pred EEEecCCCC------CcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCC-
Q 001638 628 AFQDIKGNH------KAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG- 700 (1039)
Q Consensus 628 A~k~l~~~~------~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~- 700 (1039)
|+|+++... -..+..|.|++|+|++.|++++|++++.+|++|++|.||++|+||||..||..+||+||+..+.
T Consensus 670 A~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~ 749 (1140)
T KOG0208|consen 670 ASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQV 749 (1140)
T ss_pred ecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCC
Confidence 999998762 2346789999999999999999999999999999999999999999999999999999998631
Q ss_pred ------------------------------------------------------CceeeCcccccC---CHHHHHhhccc
Q 001638 701 ------------------------------------------------------GLAIEGTDFRSK---NPQEMQELIPK 723 (1039)
Q Consensus 701 ------------------------------------------------------~~vi~G~~~~~~---~~~~~~~~~~~ 723 (1039)
..+++|+.|+-+ .++.+++++.+
T Consensus 750 ~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~ 829 (1140)
T KOG0208|consen 750 KVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLK 829 (1140)
T ss_pred eEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhc
Confidence 246667776544 35678888899
Q ss_pred ceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHh
Q 001638 724 LQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWG 803 (1039)
Q Consensus 724 ~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~g 803 (1039)
..||||++|.||.++|+.||+. |..|+|+|||+||+.|||+||+||+.+. ..|.-+|.+.-.-.+.+.++++|++|
T Consensus 830 ~~VfARMsP~qK~~Lie~lQkl-~y~VgfCGDGANDCgALKaAdvGISLSe---aEASvAApFTSk~~~I~cVp~vIrEG 905 (1140)
T KOG0208|consen 830 GTVFARMSPDQKAELIEALQKL-GYKVGFCGDGANDCGALKAADVGISLSE---AEASVAAPFTSKTPSISCVPDVIREG 905 (1140)
T ss_pred CeEEeecCchhHHHHHHHHHhc-CcEEEecCCCcchhhhhhhcccCcchhh---hhHhhcCccccCCCchhhHhHHHhhh
Confidence 9999999999999999999999 9999999999999999999999998872 23666788888878999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCchHHHHHHHHHHHhhHHHHhHhccCCCCccccCCCCCCCCCCc
Q 001638 804 RSVYINIQKFVQFQLTVNIVALVINFVAACIT--GSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHF 881 (1039)
Q Consensus 804 R~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~--~~~pl~~~qll~vnli~d~l~alala~e~p~~~lm~~~P~~~~~~l 881 (1039)
|+..-.--..++|...|.++ +|++.++. -..-++..|.|++.++..+..|++++.-+|.+.+-+.|| +..+
T Consensus 906 RaALVTSf~~FkYMalYs~i----qFisv~~LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP---~~~L 978 (1140)
T KOG0208|consen 906 RAALVTSFACFKYMALYSAI----QFISVVFLYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRP---PTNL 978 (1140)
T ss_pred hhhhhhhHHHHHHHHHHHHH----HHHhhheeeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCC---Cccc
Confidence 99998877777777666554 45544433 457889999999999999999999998888888888777 4468
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhc--ccccccCCC----CccchhhHHHHHHHHHHHHHHHHHhcccccccccc-cc
Q 001638 882 ITVTMWRNIIGQSIYQIIVLGVLTFCG--KKILKLSGP----NATLILNTFIFNSFVFCQVFNEINSRDMEKINVFR-GI 954 (1039)
Q Consensus 882 i~~~~~~~i~~~~i~q~~v~~~l~~~~--~~~~~~~~~----~~~~~~~T~~f~~~v~~qv~n~~~~r~~~~~~~f~-~~ 954 (1039)
+++......++|.++..++.+.+.+.+ ..|+.-+.. +......|.+|..-.|.-+++.+- ..+-+.|+ .+
T Consensus 979 ~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~pp~~~~~~nt~s~~~T~lF~vS~fqYi~~a~v---~S~g~pfr~pl 1055 (1140)
T KOG0208|consen 979 LSKKILVPLLLQIVLICLVQWILTLIVEPQPWYEPPNPQVDDNTQSSDNTSLFFVSSFQYIFIALV---LSKGSPFRRPL 1055 (1140)
T ss_pred cccchhhhhHHHHHHHHHHHHhhheeeccccceecCCCCcCcccccceeeEeeehhHHHHHHhhee---eccCCcccCch
Confidence 888888888888777666666555543 234432111 122334555665444444555443 33344454 67
Q ss_pred chhHHHHHHHHHH
Q 001638 955 FSSWVFIAVLVAT 967 (1039)
Q Consensus 955 ~~n~~f~~~~~~~ 967 (1039)
|+|+.|...+...
T Consensus 1056 ~~n~~f~~~i~~i 1068 (1140)
T KOG0208|consen 1056 WKNVLFKVFITVI 1068 (1140)
T ss_pred hcCceeeeehhhH
Confidence 8998887554433
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-87 Score=743.06 Aligned_cols=635 Identities=25% Similarity=0.423 Sum_probs=518.2
Q ss_pred CCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCcc
Q 001638 118 GGVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGV 197 (1039)
Q Consensus 118 ~gv~~~~~~l~t~~~~GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~ 197 (1039)
+.++.+-+.|..... ||+++|+++|+++||.|++.+++...+.+|+ .-+.+|..+..-.+|++.+++.- ..|.+..|
T Consensus 21 ~p~eeVfeeL~~t~~-GLt~~E~~eRlk~fG~NkleEkken~~lKFl-~Fm~~PlswVMEaAAimA~~Lan-g~~~~~DW 97 (942)
T KOG0205|consen 21 IPIEEVFEELLCTRE-GLTSDEVEERLKIFGPNKLEEKKESKFLKFL-GFMWNPLSWVMEAAAIMAIGLAN-GGGRPPDW 97 (942)
T ss_pred CchhhhHHHHhcCCC-CCchHHHHHHHHhhCchhhhhhhhhHHHHHH-HHHhchHHHHHHHHHHHHHHHhc-CCCCCcch
Confidence 577888877776644 9999999999999999999988766666654 44567777888888887766532 24456689
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeC
Q 001638 198 YDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGY 277 (1039)
Q Consensus 198 ~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~ 277 (1039)
.|.+.|...+++...++.+++|+.-.....|.+.. ..+.+|+|||+|.++.+++||||||+.++.||+|||||++++|+
T Consensus 98 ~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~L-A~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD 176 (942)
T KOG0205|consen 98 QDFVGICCLLLINSTISFIEENNAGNAAAALMAGL-APKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLLEGD 176 (942)
T ss_pred hhhhhhheeeeecceeeeeeccccchHHHHHHhcc-CcccEEeecCeeeeeeccccccCceeeeccCCEecCccceecCC
Confidence 99999888888888888888888888777777654 45899999999999999999999999999999999999999999
Q ss_pred ceeEeccCCCCCCCccccCCCCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCCCchHHHHhHHHHHHHHH
Q 001638 278 SLTIDESSLSGETEPVHINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKI 357 (1039)
Q Consensus 278 ~l~VDES~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a~~i~~i 357 (1039)
-|+||+|.|||||.|+.|++++. +||||.|.+|++.|+|++||.+|..||-..++.. ......+|+-++.+.+++...
T Consensus 177 ~LkiDQSAlTGESLpvtKh~gd~-vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ci~s 254 (942)
T KOG0205|consen 177 PLKIDQSALTGESLPVTKHPGDE-VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNFCICS 254 (942)
T ss_pred ccccchhhhcCCccccccCCCCc-eecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhhhhHHHHH
Confidence 99999999999999999999888 9999999999999999999999999999999887 677788999998888765432
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhh-hcCchhHHHHHHHHHHHHHhhccccccc
Q 001638 358 GLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVA-VPEGLPLAVTLSLAFAMKKLMNDKALVR 436 (1039)
Q Consensus 358 ~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvva-vP~~Lplavtl~la~~~~~m~~~~ilvr 436 (1039)
.. +. .++.+.+.|.... ...+.....+.++++. +|.|||..++.+++.+..+++++|++++
T Consensus 255 i~-~g--~lie~~vmy~~q~---------------R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItk 316 (942)
T KOG0205|consen 255 IA-LG--MLIEITVMYPIQH---------------RLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 316 (942)
T ss_pred HH-HH--HHHHHHhhhhhhh---------------hhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHH
Confidence 21 11 1122222222211 1112223334455555 9999999999999999999999999999
Q ss_pred cchhhhcccceeEEEecCcCccccCceEEEE--EEEcCcccccccCCcccccCCCCCHHHHHHHHHHHHhccCCceeecC
Q 001638 437 HLSACETMGSASCICTDKTGTLTTNHMVVTK--LWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDK 514 (1039)
Q Consensus 437 ~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 514 (1039)
+++|+|.|+.++++|+|||||||.|+++|.+ +.+.-. .++.+.+-+ . +|..+. .++
T Consensus 317 rmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~---------------gv~~D~~~L--~-A~rAsr---~en- 374 (942)
T KOG0205|consen 317 RMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVK---------------GVDKDDVLL--T-AARASR---KEN- 374 (942)
T ss_pred HHHHHHHhhCceEEeecCcCceeecceecCcCcceeeec---------------CCChHHHHH--H-HHHHhh---hcC-
Confidence 9999999999999999999999999999987 311111 122222211 1 111111 111
Q ss_pred CCCccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhhc
Q 001638 515 DGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIIN 594 (1039)
Q Consensus 515 ~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~ 594 (1039)
-+..|.|++.... ++.+.+..++.++..|||+..||.+..+.+++ |..+-.+|||||.|++.|..
T Consensus 375 -------~DAID~A~v~~L~----dPKeara~ikevhF~PFnPV~Krta~ty~d~d-G~~~r~sKGAPeqil~l~~~--- 439 (942)
T KOG0205|consen 375 -------QDAIDAAIVGMLA----DPKEARAGIKEVHFLPFNPVDKRTALTYIDPD-GNWHRVSKGAPEQILKLCNE--- 439 (942)
T ss_pred -------hhhHHHHHHHhhc----CHHHHhhCceEEeeccCCccccceEEEEECCC-CCEEEecCCChHHHHHHhhc---
Confidence 2568888876533 35778899999999999999999999999988 99999999999999999973
Q ss_pred cCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCC
Q 001638 595 ADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGI 674 (1039)
Q Consensus 595 ~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi 674 (1039)
+.+.++++.+.+++||++|+|.+++||+..++... +.......|+|+.-+-||+|.+..++|++...-|+
T Consensus 440 --------~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~--~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv 509 (942)
T KOG0205|consen 440 --------DHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTK--ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGV 509 (942)
T ss_pred --------cCcchHHHHHHHHHHHHhcchhhhhhhhccccccc--cCCCCCcccccccccCCCCccchHHHHHHHHhccc
Confidence 34566789999999999999999999998776432 23456678999999999999999999999999999
Q ss_pred EEEEECCCCHHHHHHHHHHcCCCCC--CCceeeCccc-ccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEE
Q 001638 675 TVRMVTGDNIHTAKAIAKECGILTD--GGLAIEGTDF-RSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVA 751 (1039)
Q Consensus 675 ~v~m~TGD~~~ta~~iA~~~GI~~~--~~~vi~G~~~-~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~ 751 (1039)
+|.|+|||...-++..++++|+-++ ++..+-|.+- .++...++++.+.+..-||.+.|++|+++|+.||++ |+.++
T Consensus 510 ~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r-~hi~g 588 (942)
T KOG0205|consen 510 NVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQER-KHIVG 588 (942)
T ss_pred eeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhc-Cceec
Confidence 9999999999999999999998663 1112222221 223335677777888889999999999999999999 99999
Q ss_pred EEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 001638 752 VTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVAL 825 (1039)
Q Consensus 752 ~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i 825 (1039)
|+|||+||+|+||.||+|||+. .+||+|+.+||+|++...++.|+.++..+|.+|.+++.+..|.++..+-.+
T Consensus 589 mtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv 661 (942)
T KOG0205|consen 589 MTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 661 (942)
T ss_pred ccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHH
Confidence 9999999999999999999999 999999999999999999999999999999999999999999887665543
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-86 Score=810.34 Aligned_cols=838 Identities=23% Similarity=0.311 Sum_probs=626.3
Q ss_pred HHhhcCCCccCCCCCCcHH----HHHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCcccchhHHHHHHHHHHHHHHHHH
Q 001638 143 RQNVYGFNRYAEKPARSFW----MFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSD 218 (1039)
Q Consensus 143 r~~~~G~N~~~~~~~~s~~----~~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~d~~~i~~~lllv~~v~a~~~ 218 (1039)
++..|-.|++...+ ++++ +.+++||++..++++++.+++++++ +.+. ++ .+.++++++|+.+++++|
T Consensus 28 ~~~~~~~N~i~TtK-Yt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~~----~~---~~~~~pl~~vl~~t~iKd 98 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTK-YTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSPF----NP---YTTLVPLLFVLGITAIKD 98 (1151)
T ss_pred hhccccCCeeEEEe-ccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-cccc----Cc---cceeeceeeeehHHHHHH
Confidence 44488889988655 4333 3579999999999999999999988 4332 22 244678889999999999
Q ss_pred HHHHHHHHHHhcccCCceEEEEeCCe-EEEEEcCCcccCcEEEEcCCCcccccEEEEeeCc----eeEeccCCCCCCCcc
Q 001638 219 YKQSLQFKALDKEKKNLIVQVTRDGY-RKKLSIYDLVVGDIVHLSIGDQVPADGILISGYS----LTIDESSLSGETEPV 293 (1039)
Q Consensus 219 ~~~~~~~~~l~~~~~~~~v~ViR~G~-~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~----l~VDES~LTGEs~pv 293 (1039)
..++.++++.+++.|+.+++|.|++. ..+..|++|+|||+|.+..+|.+|||.++++++. |+|++++|+||++.+
T Consensus 99 ~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK 178 (1151)
T KOG0206|consen 99 AIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLK 178 (1151)
T ss_pred HHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccc
Confidence 99999999999999999999999644 8999999999999999999999999999999874 899999999999987
Q ss_pred ccC----------------------------------------------CCCceeecccEEeeCC-eEEEEEEeccchhh
Q 001638 294 HIN----------------------------------------------RDRPFLLSGTKVQDGS-GKMLVTSVGMRTEW 326 (1039)
Q Consensus 294 ~k~----------------------------------------------~~~~~l~sGt~v~~G~-~~~~V~~vG~~T~~ 326 (1039)
.|. ..+++++.|+++.+.. +.+.|+.+|++|
T Consensus 179 ~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dt-- 256 (1151)
T KOG0206|consen 179 VKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDT-- 256 (1151)
T ss_pred eeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcc--
Confidence 664 0123578888888754 789999999999
Q ss_pred HHHHHHhccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchh---hhHHHHHHHHHHHH
Q 001638 327 GRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSI---DAMKLLNYFAIAVT 403 (1039)
Q Consensus 327 gki~~~~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~---~~~~~~~~~~~ai~ 403 (1039)
|++.+...+..+++++++.+|.....+..+.++++++..+...+ ............|+.. ........|..++.
T Consensus 257 -K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~i 333 (1151)
T KOG0206|consen 257 -KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAI--WTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFII 333 (1151)
T ss_pred -hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhhe--eeeecccccCchhhhcCchHHHHHHHHHHHHHh
Confidence 77888878888999999999887655544433333322222111 1111101111223222 11233455667777
Q ss_pred HHHhhhcCchhHHHHHHHHHHHHHhh----------ccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCc
Q 001638 404 IVVVAVPEGLPLAVTLSLAFAMKKLM----------NDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNE 473 (1039)
Q Consensus 404 ilvvavP~~Lplavtl~la~~~~~m~----------~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~ 473 (1039)
++...+|.+|...+.+.-.+.+.-+. ...+.+|+.+..|.||++++|++|||||||+|.|++.++.++|.
T Consensus 334 l~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~ 413 (1151)
T KOG0206|consen 334 LYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGT 413 (1151)
T ss_pred hhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCc
Confidence 88889999999988888777664332 34678999999999999999999999999999999999999987
Q ss_pred ccccccCCcc------c---------------------ccCC-CCCHHHHHHHHHHHHhccCCceeecCC--CCccccCC
Q 001638 474 AKTIKSGDNE------K---------------------LLKP-SVSDAVFNIFLQSIFQNTGSEVVKDKD--GRTNILGT 523 (1039)
Q Consensus 474 ~~~~~~~~~~------~---------------------~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~g~ 523 (1039)
.|.....+.. . .... .........+..++++|++..+..+.+ ...+...|
T Consensus 414 ~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~S 493 (1151)
T KOG0206|consen 414 SYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAES 493 (1151)
T ss_pred ccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCC
Confidence 7643321100 0 0000 012233445667778888876655333 24588899
Q ss_pred chHHHHHHHHHHhCCCcccc------------cccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhh
Q 001638 524 PTERAILEFGLILGGDSTFH------------REESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDK 591 (1039)
Q Consensus 524 p~e~All~~a~~~g~~~~~~------------~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~ 591 (1039)
|+|.|+++.|+.+|..+... .+.|+++++++|+|.||||||+|+.++ |++.+|||||+..|.++++.
T Consensus 494 PDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~-g~i~LycKGADsvI~erL~~ 572 (1151)
T KOG0206|consen 494 PDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPD-GRILLYCKGADSVIFERLSK 572 (1151)
T ss_pred CcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCC-CcEEEEEcCcchhhHhhhhh
Confidence 99999999999999876432 357999999999999999999999998 89999999999999999985
Q ss_pred hhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCc-----------------------CCCCCCCcEe
Q 001638 592 IINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKA-----------------------ESIPENNYTL 648 (1039)
Q Consensus 592 ~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~-----------------------~~~~e~~l~~ 648 (1039)
-.++.+++..+++++||.+||||||+|||++++++.+ .+.+|+||++
T Consensus 573 ----------~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~L 642 (1151)
T KOG0206|consen 573 ----------NGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLIL 642 (1151)
T ss_pred ----------cchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchh
Confidence 1345667788899999999999999999999876511 1467999999
Q ss_pred eeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCC----------------------------
Q 001638 649 IAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG---------------------------- 700 (1039)
Q Consensus 649 lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~---------------------------- 700 (1039)
+|.+++||++++||+++|+.|++||||+||+|||..+||.+||..|++..++
T Consensus 643 LGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~ 722 (1151)
T KOG0206|consen 643 LGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLL 722 (1151)
T ss_pred hcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998742
Q ss_pred -------------------CceeeCcccccCCHHH----HHhhc--ccceEEEecChhhHHHHHHHHhhcCCCEEEEEcC
Q 001638 701 -------------------GLAIEGTDFRSKNPQE----MQELI--PKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGN 755 (1039)
Q Consensus 701 -------------------~~vi~G~~~~~~~~~~----~~~~~--~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GD 755 (1039)
.++++|+.+....+++ +.++. ++..++||+||.||..+|+..++..+.+++++||
T Consensus 723 ~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGD 802 (1151)
T KOG0206|consen 723 RKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGD 802 (1151)
T ss_pred HhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeC
Confidence 2456666655443332 22332 4557999999999999999998776899999999
Q ss_pred CccCHHHhhhCCcceeecCCCcHH--HHhccCEEeecCCchHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001638 756 GTNDAPALHEADIGLAMGIAGTEV--AKENADVIIMDDNFTTIVTV-ARWGRSVYINIQKFVQFQLTVNIVALVINFVAA 832 (1039)
Q Consensus 756 G~ND~~aL~~AdVGIamgi~gt~~--ak~~aDivl~dd~f~~i~~~-i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~ 832 (1039)
|.||.+|+++||||| ||+|.|. |..+||+.+.+ |.-+-++ +.|||+.|.|+.+++.|.+++|+...++.|++.
T Consensus 803 GANDVsMIQ~AhVGV--GIsG~EGmQAvmsSD~AIaq--FrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~ 878 (1151)
T KOG0206|consen 803 GANDVSMIQEAHVGV--GISGQEGMQAVMSSDFAIAQ--FRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQ 878 (1151)
T ss_pred CCccchheeeCCcCe--eeccchhhhhhhcccchHHH--HHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999 6677775 88999999997 7778876 588999999999999999999999999999999
Q ss_pred HHcCC---CchHHHHHHHHHHHhhHHHHhHhcc---CCCCccccCCCCC---CCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 001638 833 CITGS---APLTAVQLLWVNMIMDTLGALALAT---EPPHEGLMQRPPI---GRNVHFITVTMWRNIIGQSIYQIIVLGV 903 (1039)
Q Consensus 833 ~~~~~---~pl~~~qll~vnli~d~l~alala~---e~p~~~lm~~~P~---~~~~~li~~~~~~~i~~~~i~q~~v~~~ 903 (1039)
+++|+ ..+..+++..+|++++++|.++++. |.+.+.+|+.|-. +++..+++...++.++..++||.+++++
T Consensus 879 f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff 958 (1151)
T KOG0206|consen 879 FFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFF 958 (1151)
T ss_pred hcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeee
Confidence 98864 5678899999999999999999983 4444445555432 4455566655555567789999998887
Q ss_pred HHHhccc--ccccCCCCcc-chhhHHHHHHHHHHHHH-HHHHhccccccccccccchhHHH-HHHHHHHHHHHHHHHh--
Q 001638 904 LTFCGKK--ILKLSGPNAT-LILNTFIFNSFVFCQVF-NEINSRDMEKINVFRGIFSSWVF-IAVLVATVGFQVIIVE-- 976 (1039)
Q Consensus 904 l~~~~~~--~~~~~~~~~~-~~~~T~~f~~~v~~qv~-n~~~~r~~~~~~~f~~~~~n~~f-~~~~~~~~~~q~~~v~-- 976 (1039)
+.+.... .+..+|.+.+ ....+.+|++.|+.-.+ -.+....|+ |-|+++ |+.+++-+++.+++-.
T Consensus 959 ~~~~~~~~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~iaL~~~ywT--------~i~~i~i~gSi~~~f~f~~iy~~~~ 1030 (1151)
T KOG0206|consen 959 LPYLVFEEQAVTSNGLTADYWTLGTTVFTIIVIVVNLKIALETSYWT--------WINHIVIWGSILLWFVFLFIYSELT 1030 (1151)
T ss_pred eeHhhheeeeeccCCCcCChhhccceEEEEEEEEEEeeeeeeehhee--------HHHHHHHHHHHHHHHHHHHHHhccc
Confidence 6554321 2222333221 22233344443331100 111111111 122222 2333333333333211
Q ss_pred --------hhhhhhcccCCChHHHHHHHHHHHHHHHHHHHHhhhccCCcc
Q 001638 977 --------LLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVGTCT 1018 (1039)
Q Consensus 977 --------~~~~~~~~~~l~~~~w~~~i~~~~~~~~~~~~~k~i~~~~~~ 1018 (1039)
+.+ ++...--++.+|+.+++..+++++++++.|.+....+|
T Consensus 1031 ~~~~~~~~~~~-~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~P 1079 (1151)
T KOG0206|consen 1031 PAISTPDPFYG-VAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFP 1079 (1151)
T ss_pred cccCCCccHHH-HHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCC
Confidence 111 12222357889999999999999999999999988777
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-83 Score=714.71 Aligned_cols=805 Identities=22% Similarity=0.305 Sum_probs=609.4
Q ss_pred HHhhcCCCccCCCCCC--cHHH-HHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCcccchhHHHHHHHHHHHHHHHHHH
Q 001638 143 RQNVYGFNRYAEKPAR--SFWM-FVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDY 219 (1039)
Q Consensus 143 r~~~~G~N~~~~~~~~--s~~~-~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~d~~~i~~~lllv~~v~a~~~~ 219 (1039)
++++|-+|.+...+-. +|.. .+++||+.+.+.++++.+..+++..+.. |.. .+.+.++.++.+++.+.+.
T Consensus 75 ~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~i-g~l------~ty~~pl~fvl~itl~kea 147 (1051)
T KOG0210|consen 75 RRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKI-GYL------STYWGPLGFVLTITLIKEA 147 (1051)
T ss_pred ccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchhee-cch------hhhhHHHHHHHHHHHHHHH
Confidence 5557888887765432 4444 4589999999999998888887765432 222 2234455666667777777
Q ss_pred HHHHHHHHHhcccCCceEEEE-eCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeC----ceeEeccCCCCCCCccc
Q 001638 220 KQSLQFKALDKEKKNLIVQVT-RDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGY----SLTIDESSLSGETEPVH 294 (1039)
Q Consensus 220 ~~~~~~~~l~~~~~~~~v~Vi-R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~----~l~VDES~LTGEs~pv~ 294 (1039)
.++.+++.-++..|+...+++ |+|-... ++++|+|||+|.++.+++||||.+++.++ ++.|-+-.|+||++.+-
T Consensus 148 vdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 148 VDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 777777777777777767666 7776555 99999999999999999999999999864 37899999999998653
Q ss_pred cC----------------------------------------------CCCceeecccEEeeCCeEEEEEEeccchhhHH
Q 001638 295 IN----------------------------------------------RDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGR 328 (1039)
Q Consensus 295 k~----------------------------------------------~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gk 328 (1039)
|- .-++.++++|.|.+|.+.++|++||.+| +
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dt---R 303 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDT---R 303 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccH---H
Confidence 31 1145799999999999999999999999 5
Q ss_pred HHHHhccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhh
Q 001638 329 LMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVA 408 (1039)
Q Consensus 329 i~~~~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvva 408 (1039)
-+.+...++.+-.-++..+|.+.+++....++++++.... . +-...|+ .+++..+.++-..
T Consensus 304 svMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~------~-----g~~~~wy--------i~~~RfllLFS~I 364 (1051)
T KOG0210|consen 304 SVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAM------K-----GFGSDWY--------IYIIRFLLLFSSI 364 (1051)
T ss_pred HHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHh------h-----cCCCchH--------HHHHHHHHHHhhh
Confidence 5556666677777888999999988776655554432211 1 1124454 3444555556666
Q ss_pred hcCchhHHHHHHHHHHHHHhhcc----ccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCccccccc-----
Q 001638 409 VPEGLPLAVTLSLAFAMKKLMND----KALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKS----- 479 (1039)
Q Consensus 409 vP~~Lplavtl~la~~~~~m~~~----~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~----- 479 (1039)
+|..|-.-+.++...-.+.+.+| |.+||.....|+||++.++.+|||||||+|+|.+++++.+.-.++.+.
T Consensus 365 IPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~ 444 (1051)
T KOG0210|consen 365 IPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVS 444 (1051)
T ss_pred ceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHH
Confidence 89999999999988888888876 678999999999999999999999999999999999998754432110
Q ss_pred ---------CCcc-----cccCCCCCHHHHHHHHHHHHhccCCceeecCCC-CccccCCchHHHHHHHHHHhCCCcccc-
Q 001638 480 ---------GDNE-----KLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDG-RTNILGTPTERAILEFGLILGGDSTFH- 543 (1039)
Q Consensus 480 ---------~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~g~p~e~All~~a~~~g~~~~~~- 543 (1039)
++.. .......+..+ .-+.++++.||+..++.+++| ..++..||+|.||++|-+..|......
T Consensus 445 ~~i~s~~~~~~~~~~~~~~~~k~~~s~rv-~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd 523 (1051)
T KOG0210|consen 445 QHIQSLYTPGRNKGKGALSRVKKDMSARV-RNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRD 523 (1051)
T ss_pred HHHHHhhCCCcccccccchhhcCcccHHH-HHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecc
Confidence 0000 00011223333 334566777888777766654 568999999999999998888654332
Q ss_pred ------------cccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHH
Q 001638 544 ------------REESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLT 611 (1039)
Q Consensus 544 ------------~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~ 611 (1039)
..+|+|++++||+|+.|||+++|+++.++++..|.|||+..+-..-. .-+.++
T Consensus 524 ~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq---------------~NdWle 588 (1051)
T KOG0210|consen 524 RHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQ---------------YNDWLE 588 (1051)
T ss_pred cceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccc---------------cchhhh
Confidence 23799999999999999999999999779999999999877643321 113567
Q ss_pred HHHHHHhHccCcEEEEEEEecCCCCCcC------------------------CCCCCCcEeeeeecccCCCCccHHHHHH
Q 001638 612 NVINGFSSEALRTLCLAFQDIKGNHKAE------------------------SIPENNYTLIAVVGIKDPVRPGVREAVE 667 (1039)
Q Consensus 612 ~~i~~~a~~glr~l~~A~k~l~~~~~~~------------------------~~~e~~l~~lG~v~i~D~lR~~v~~aI~ 667 (1039)
+...+||.+||||+.+|.|.+++++.+. ..+|+|+.++|+.|.||+++++|+.+++
T Consensus 589 EE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLE 668 (1051)
T KOG0210|consen 589 EECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLE 668 (1051)
T ss_pred hhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHH
Confidence 7788999999999999999998764110 2568999999999999999999999999
Q ss_pred HHHHCCCEEEEECCCCHHHHHHHHHHcCCCCC----------------------------CCceeeCccccc---CCHHH
Q 001638 668 TCLAAGITVRMVTGDNIHTAKAIAKECGILTD----------------------------GGLAIEGTDFRS---KNPQE 716 (1039)
Q Consensus 668 ~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~----------------------------~~~vi~G~~~~~---~~~~~ 716 (1039)
.||+|||+|||+|||..+||..||+..++.+. ..++++|+.+.- .-++|
T Consensus 669 lLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~E 748 (1051)
T KOG0210|consen 669 LLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDE 748 (1051)
T ss_pred HHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHH
Confidence 99999999999999999999999999999863 247888887653 34577
Q ss_pred HHhhccc--ceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHH--HHhccCEEeecCC
Q 001638 717 MQELIPK--LQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEV--AKENADVIIMDDN 792 (1039)
Q Consensus 717 ~~~~~~~--~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~--ak~~aDivl~dd~ 792 (1039)
+.++..+ ..|+|||+|+||+++++.+|++.|..|+++|||.||+.|+++||+|| ||.|.|. |.-+||+.|.+
T Consensus 749 f~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~Gi--GI~gkEGkQASLAADfSItq-- 824 (1051)
T KOG0210|consen 749 FIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGI--GIVGKEGKQASLAADFSITQ-- 824 (1051)
T ss_pred HHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccce--eeecccccccchhccccHHH--
Confidence 7776654 46999999999999999999988999999999999999999999999 6667764 78889999986
Q ss_pred chHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHH---HHHHHHHhhHHHHhHhccCCC-Cc
Q 001638 793 FTTIVTVA-RWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAVQ---LLWVNMIMDTLGALALATEPP-HE 867 (1039)
Q Consensus 793 f~~i~~~i-~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~~~~pl~~~q---ll~vnli~d~l~alala~e~p-~~ 867 (1039)
|+.+-+++ -+||+.|+|-.+.-||.+...++...++.++++.+.+.|..-.| |.-+..+++.+|.++|..+.- ++
T Consensus 825 F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~ 904 (1051)
T KOG0210|consen 825 FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSE 904 (1051)
T ss_pred HHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccH
Confidence 99999986 45999999999999999999999999999999888888877776 455788899999999876432 22
Q ss_pred c-ccCCCC------CCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCccchhhHHHHHHHHHHHHHH-H
Q 001638 868 G-LMQRPP------IGRNVHFITVTMWRNIIGQSIYQIIVLGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFN-E 939 (1039)
Q Consensus 868 ~-lm~~~P------~~~~~~li~~~~~~~i~~~~i~q~~v~~~l~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~qv~n-~ 939 (1039)
. .+..|. .+|.-+.-+... |...++||..++.+..+.- +. +.....-++.|.++++-.+.. +
T Consensus 905 ~~a~~yPELYKeL~kgr~lSYKtF~i---wvLISiYQG~vim~g~~~l---~~----~ef~~ivaisFtaLi~tELiMVa 974 (1051)
T KOG0210|consen 905 SLAVLYPELYKELTKGRSLSYKTFFI---WVLISIYQGSVIMYGALLL---FD----TEFIHIVAISFTALILTELIMVA 974 (1051)
T ss_pred HHHhhhHHHHHHHhcCCccchhhhhh---hhhHHHHcccHHHHHHHHH---hh----hhheEeeeeeeHHHHHHHHHHHh
Confidence 2 233332 233333333333 3445899988876643221 11 111223455676666654321 2
Q ss_pred HHhccccccccccccchhHHHHHHHHHHHHHHHHHHhhhhhhhcccC-CChHHHHHHHHHHHHHHHHHHHHhhhccCCcc
Q 001638 940 INSRDMEKINVFRGIFSSWVFIAVLVATVGFQVIIVELLGTFATTVP-LNWKLWLASVVIGAISMPFGVLLKCIPVGTCT 1018 (1039)
Q Consensus 940 ~~~r~~~~~~~f~~~~~n~~f~~~~~~~~~~q~~~v~~~~~~~~~~~-l~~~~w~~~i~~~~~~~~~~~~~k~i~~~~~~ 1018 (1039)
+..++ .+|+.+..-++++.++++.+.|++.+|.... ++|.+.+...++.+++.++.++.|.+..+..|
T Consensus 975 Ltv~t-----------w~~~m~vae~lsL~~Yivsl~~l~~yfd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sP 1043 (1051)
T KOG0210|consen 975 LTVRT-----------WHWLMVVAELLSLALYIVSLAFLHEYFDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSP 1043 (1051)
T ss_pred hhhhh-----------hhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 22232 2356667777888888888899988877543 56777777778888899999999999998877
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-80 Score=738.96 Aligned_cols=545 Identities=28% Similarity=0.385 Sum_probs=430.7
Q ss_pred CcHHHHHHHHHhhHH---HHHHHHHHHHHhhccCCCCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--c
Q 001638 158 RSFWMFVWEALHDLT---LIILMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKE--K 232 (1039)
Q Consensus 158 ~s~~~~~~~~~~~~~---~~il~v~a~ls~~~~~~~~~~~~~~~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~--~ 232 (1039)
.+|++-.|+.++... ..+..++++.+++++....-+. .||+..++++.++++. ..+.++-+.+..+.+.+. .
T Consensus 132 ~~f~~~a~~~l~~~~~~md~Lv~la~~~A~~~s~~~~~~~-~yf~~aa~ii~l~~~G--~~LE~~a~~ra~~ai~~L~~l 208 (713)
T COG2217 132 WPFYRGAWRALRRGRLNMDTLVALATIGAYAYSLYATLFP-VYFEEAAMLIFLFLLG--RYLEARAKGRARRAIRALLDL 208 (713)
T ss_pred HHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHcc
Confidence 344555566666542 1222233333344443211111 5677766665444432 223333333333333332 3
Q ss_pred CCceEEEEe-CCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCceeEeccCCCCCCCccccCCCCceeecccEEeeC
Q 001638 233 KNLIVQVTR-DGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDRPFLLSGTKVQDG 311 (1039)
Q Consensus 233 ~~~~v~ViR-~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGEs~pv~k~~~~~~l~sGt~v~~G 311 (1039)
.+..+++++ ||++++|+++||++||+|.++|||+||+||++++|++ .||||++||||.|+.|..++. +++||.+.+|
T Consensus 209 ~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~s-~vDeS~iTGEs~PV~k~~Gd~-V~aGtiN~~G 286 (713)
T COG2217 209 APKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSS-SVDESMLTGESLPVEKKPGDE-VFAGTVNLDG 286 (713)
T ss_pred CCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCcE-EeecchhhCCCCCEecCCCCE-EeeeEEECCc
Confidence 456776666 5669999999999999999999999999999999999 899999999999999998877 9999999999
Q ss_pred CeEEEEEEeccchhhHHHHHHhccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhh
Q 001638 312 SGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDA 391 (1039)
Q Consensus 312 ~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~ 391 (1039)
..++.|+++|.+|.+++|.+++++++..++|.|+..|+++.++.+..+++++++|++|.+. . .
T Consensus 287 ~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~---~--------~------ 349 (713)
T COG2217 287 SLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLF---G--------G------ 349 (713)
T ss_pred cEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHh---c--------C------
Confidence 9999999999999999999999999999999999999999999999999999988865321 1 0
Q ss_pred HHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEc
Q 001638 392 MKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWIC 471 (1039)
Q Consensus 392 ~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~ 471 (1039)
..+..++..++++++++|||+|.+++|+++..++.+.+++|+|+|+.+++|+++++|+++||||||||+|+|+|+++...
T Consensus 350 ~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~ 429 (713)
T COG2217 350 GDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVAL 429 (713)
T ss_pred CcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecC
Confidence 12335788999999999999999999999999999999999999999999999999999999999999999999998764
Q ss_pred CcccccccCCcccccCCCCCHHHHHHHHHHHHhccCCceeecCCCCccccCCchHHHHHHHHHHhCCCcccccccccEEE
Q 001638 472 NEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVK 551 (1039)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~ 551 (1039)
+.. .++.+. .+.+.. ..+.||..+|+++++...+.... +...
T Consensus 430 ~~~----------------e~~~L~---laAalE-------------~~S~HPiA~AIv~~a~~~~~~~~------~~~~ 471 (713)
T COG2217 430 DGD----------------EDELLA---LAAALE-------------QHSEHPLAKAIVKAAAERGLPDV------EDFE 471 (713)
T ss_pred CCC----------------HHHHHH---HHHHHH-------------hcCCChHHHHHHHHHHhcCCCCc------ccee
Confidence 320 122222 222221 23459999999998887762111 1122
Q ss_pred EecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEe
Q 001638 552 VEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQD 631 (1039)
Q Consensus 552 ~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~ 631 (1039)
.+| . .++--+.+ | ..+.-|.+..+.+ .+.. .+. ..+..+.+.++|..++.++
T Consensus 472 ~i~----G--~Gv~~~v~--g--~~v~vG~~~~~~~--------~~~~--~~~-----~~~~~~~~~~~G~t~v~va--- 523 (713)
T COG2217 472 EIP----G--RGVEAEVD--G--ERVLVGNARLLGE--------EGID--LPL-----LSERIEALESEGKTVVFVA--- 523 (713)
T ss_pred eec----c--CcEEEEEC--C--EEEEEcCHHHHhh--------cCCC--ccc-----hhhhHHHHHhcCCeEEEEE---
Confidence 222 1 12211112 2 2344577655432 1111 111 3455677888898888887
Q ss_pred cCCCCCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCccccc
Q 001638 632 IKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRS 711 (1039)
Q Consensus 632 l~~~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~ 711 (1039)
.|..++|+++++|++||+++++|++||+.|+++.|+||||..+|++||+++||..
T Consensus 524 ------------~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~------------- 578 (713)
T COG2217 524 ------------VDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE------------- 578 (713)
T ss_pred ------------ECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh-------------
Confidence 4558999999999999999999999999999999999999999999999999976
Q ss_pred CCHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecC
Q 001638 712 KNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDD 791 (1039)
Q Consensus 712 ~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd 791 (1039)
++|.+.|+||.++|+.||++ |++|+|+|||+||+|||++|||||||| +|+|+|+|+||++|++|
T Consensus 579 --------------v~AellPedK~~~V~~l~~~-g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~~ 642 (713)
T COG2217 579 --------------VRAELLPEDKAEIVRELQAE-GRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRD 642 (713)
T ss_pred --------------heccCCcHHHHHHHHHHHhc-CCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEecC
Confidence 99999999999999999998 999999999999999999999999999 79999999999999999
Q ss_pred CchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001638 792 NFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVA 831 (1039)
Q Consensus 792 ~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~ 831 (1039)
++..++.+++.+|+++++|++|+.|.|.||+++++++..+
T Consensus 643 dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 643 DLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999988766
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-76 Score=731.94 Aligned_cols=520 Identities=25% Similarity=0.348 Sum_probs=425.1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEee
Q 001638 197 VYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISG 276 (1039)
Q Consensus 197 ~~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g 276 (1039)
|.++..+++.+++.-.+..+.+++.++..++|.+ ..+..++|+|||++++|++++|+|||+|.+++||+|||||++++|
T Consensus 206 ~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~-l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 206 TAEAAMVLLLFLIGERLEGYAASRARRGVSALMA-LVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 5555544444444444444444444445555554 346689999999999999999999999999999999999999999
Q ss_pred CceeEeccCCCCCCCccccCCCCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCCCchHHHHhHHHHHHHH
Q 001638 277 YSLTIDESSLSGETEPVHINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGK 356 (1039)
Q Consensus 277 ~~l~VDES~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a~~i~~ 356 (1039)
+. .||||+|||||.|+.|..++. +|+||.+.+|.++++|+++|.+|.+|+|.+++++++.+++|+|+.+|+++.++++
T Consensus 285 ~~-~vdes~lTGEs~Pv~k~~Gd~-V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~ 362 (741)
T PRK11033 285 FA-SFDESALTGESIPVERATGEK-VPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTP 362 (741)
T ss_pred cE-EeecccccCCCCCEecCCCCe-eccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHH
Confidence 76 899999999999999988765 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccccccc
Q 001638 357 IGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVR 436 (1039)
Q Consensus 357 i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ilvr 436 (1039)
+++++++++|+++.+.+ + . .+...+..++++++++|||+|.+++|+++..++.+++|+|+++|
T Consensus 363 ~v~~~a~~~~~~~~~~~--~-------~--------~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik 425 (741)
T PRK11033 363 AIMLVALLVILVPPLLF--A-------A--------PWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIK 425 (741)
T ss_pred HHHHHHHHHHHHHHHHc--c-------C--------CHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEc
Confidence 99999998888753211 0 1 12345778899999999999999999999999999999999999
Q ss_pred cchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHHHHHHHhccCCceeecCCC
Q 001638 437 HLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDG 516 (1039)
Q Consensus 437 ~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 516 (1039)
+++++|+|+++|+||||||||||+|+|+|++++..+.. +++ +++..+....
T Consensus 426 ~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~----------------~~~--~~l~~aa~~e----------- 476 (741)
T PRK11033 426 GGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGI----------------SES--ELLALAAAVE----------- 476 (741)
T ss_pred CcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCC----------------CHH--HHHHHHHHHh-----------
Confidence 99999999999999999999999999999998753321 111 1111111111
Q ss_pred CccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEE-EEEc-CCCCeEEEEEeCcHHHHHhhhhhhhc
Q 001638 517 RTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSV-LVSL-PNNGGFRVFCKGASEIILNMCDKIIN 594 (1039)
Q Consensus 517 ~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsv-vv~~-~~~~~~~~~~KGa~e~il~~c~~~~~ 594 (1039)
..+.||.++|+++++.+.+.+ +||.++++.+.- -++. -+ |.. +.-|+++.+.+
T Consensus 477 --~~s~hPia~Ai~~~a~~~~~~-------------~~~~~~~~~~~g~Gv~~~~~-g~~--~~ig~~~~~~~------- 531 (741)
T PRK11033 477 --QGSTHPLAQAIVREAQVRGLA-------------IPEAESQRALAGSGIEGQVN-GER--VLICAPGKLPP------- 531 (741)
T ss_pred --cCCCCHHHHHHHHHHHhcCCC-------------CCCCcceEEEeeEEEEEEEC-CEE--EEEecchhhhh-------
Confidence 123599999999998876543 466666666531 1221 11 222 23477765532
Q ss_pred cCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCC
Q 001638 595 ADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGI 674 (1039)
Q Consensus 595 ~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi 674 (1039)
++ +.+.+.++.+..+|++++++|+ |.+++|+++++|++|||++++|++|+++|+
T Consensus 532 -------~~----~~~~~~~~~~~~~g~~~v~va~---------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi 585 (741)
T PRK11033 532 -------LA----DAFAGQINELESAGKTVVLVLR---------------NDDVLGLIALQDTLRADARQAISELKALGI 585 (741)
T ss_pred -------cc----HHHHHHHHHHHhCCCEEEEEEE---------------CCEEEEEEEEecCCchhHHHHHHHHHHCCC
Confidence 12 2344456788999999999994 568999999999999999999999999999
Q ss_pred EEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEc
Q 001638 675 TVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTG 754 (1039)
Q Consensus 675 ~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~G 754 (1039)
+++|+|||+..+|+++|+++||. .+++.+|+||..+|+.+|+. +.|+|+|
T Consensus 586 ~~~llTGd~~~~a~~ia~~lgi~----------------------------~~~~~~p~~K~~~v~~l~~~--~~v~mvG 635 (741)
T PRK11033 586 KGVMLTGDNPRAAAAIAGELGID----------------------------FRAGLLPEDKVKAVTELNQH--APLAMVG 635 (741)
T ss_pred EEEEEcCCCHHHHHHHHHHcCCC----------------------------eecCCCHHHHHHHHHHHhcC--CCEEEEE
Confidence 99999999999999999999994 56788999999999999965 5799999
Q ss_pred CCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001638 755 NGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACI 834 (1039)
Q Consensus 755 DG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~ 834 (1039)
||.||+|||++|||||||| +|+++++++||+++++|++..++.++++||++++||++|+.|.+.+|++++++++++.+
T Consensus 636 DgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~g~~- 713 (741)
T PRK11033 636 DGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLLGIT- 713 (741)
T ss_pred CCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-
Confidence 9999999999999999999 89999999999999999999999999999999999999999999999999888765421
Q ss_pred cCCCchHHHHHHHHHHHhhHHHHh
Q 001638 835 TGSAPLTAVQLLWVNMIMDTLGAL 858 (1039)
Q Consensus 835 ~~~~pl~~~qll~vnli~d~l~al 858 (1039)
| +|+..+.+.+.++
T Consensus 714 ----~------~~~a~~~~~~ss~ 727 (741)
T PRK11033 714 ----G------LWLAVLADSGATA 727 (741)
T ss_pred ----H------HHHHHHHHcChHH
Confidence 1 4666666655444
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-76 Score=707.56 Aligned_cols=492 Identities=38% Similarity=0.590 Sum_probs=430.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-cCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCceeEecc
Q 001638 206 SILLVVIVTAVSDYKQSLQFKALDKE-KKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDES 284 (1039)
Q Consensus 206 ~lllv~~v~a~~~~~~~~~~~~l~~~-~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDES 284 (1039)
++++..++..+.+++.++..+++.+. .++..++|+|+| +++|++++|+|||+|.+++||+|||||++++|+ +.||||
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~-~~vdes 82 (499)
T TIGR01494 5 LVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGS-CFVDES 82 (499)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEcc-EEEEcc
Confidence 34556677778888888888888763 567799999999 999999999999999999999999999999995 589999
Q ss_pred CCCCCCCccccCCCCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCCCchHHHHhHHH-HHHHHHHHHHHH
Q 001638 285 SLSGETEPVHINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVA-TVIGKIGLVFAV 363 (1039)
Q Consensus 285 ~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a-~~i~~i~l~~a~ 363 (1039)
+|||||.|+.|.+++. +++||.+.+|++++.|+.+|.+|..+++...+.++...++|+|++.++++ .++..+.+++++
T Consensus 83 ~LTGEs~pv~k~~g~~-v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~ 161 (499)
T TIGR01494 83 NLTGESVPVLKTAGDA-VFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIAL 161 (499)
T ss_pred cccCCCCCeeeccCCc-cccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987765 99999999999999999999999999999999887777899999999999 777777777777
Q ss_pred HHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccccccccchhhhc
Q 001638 364 LTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACET 443 (1039)
Q Consensus 364 l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ilvr~~~a~E~ 443 (1039)
++++++...+. . ...+...+..++++++++|||+||++++++++.+..+|+++|+++|+++++|+
T Consensus 162 ~~~~~~~~~~~------------~---~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~ 226 (499)
T TIGR01494 162 AVFLFWAIGLW------------D---PNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEE 226 (499)
T ss_pred HHHHHHHHHHc------------c---cccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhh
Confidence 66665432210 0 00234678889999999999999999999999999999999999999999999
Q ss_pred ccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHHHHHHHhccCCceeecCCCCccccCC
Q 001638 444 MGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGT 523 (1039)
Q Consensus 444 Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~ 523 (1039)
||+++++|||||||||+|+|+|.+++..+. .+.++|
T Consensus 227 l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~--------------------------------------------~~~s~h 262 (499)
T TIGR01494 227 LGKVDYICSDKTGTLTKNEMSFKKVSVLGG--------------------------------------------EYLSGH 262 (499)
T ss_pred ccCCcEEEeeCCCccccCceEEEEEEecCC--------------------------------------------CcCCCC
Confidence 999999999999999999999999875321 023469
Q ss_pred chHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhhccCCccccCC
Q 001638 524 PTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPIS 603 (1039)
Q Consensus 524 p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~ 603 (1039)
|.|.|+++++... .++..||++.+|+|+++++.++ + .++||+++.+++.|.+
T Consensus 263 p~~~ai~~~~~~~------------~~~~~~f~~~~~~~~~~~~~~~-~---~~~~G~~~~i~~~~~~------------ 314 (499)
T TIGR01494 263 PDERALVKSAKWK------------ILNVFEFSSVRKRMSVIVRGPD-G---TYVKGAPEFVLSRVKD------------ 314 (499)
T ss_pred hHHHHHHHHhhhc------------CcceeccCCCCceEEEEEecCC-c---EEEeCCHHHHHHhhHH------------
Confidence 9999999988642 1357899999999999998643 3 4789999999998863
Q ss_pred HHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCC
Q 001638 604 EEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDN 683 (1039)
Q Consensus 604 ~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~ 683 (1039)
+.+.++.++.+|+|++++|++. +++|+++++|++|++++++|+.|+++|++++|+|||+
T Consensus 315 ------~~~~~~~~~~~g~~~~~~a~~~---------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~ 373 (499)
T TIGR01494 315 ------LEEKVKELAQSGLRVLAVASKE---------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDN 373 (499)
T ss_pred ------HHHHHHHHHhCCCEEEEEEECC---------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCC
Confidence 1223446788999999999642 6999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHh
Q 001638 684 IHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPAL 763 (1039)
Q Consensus 684 ~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL 763 (1039)
..+|..+|+++|| +++++|++|.++|+.+|+. |+.|+|+|||.||+|||
T Consensus 374 ~~~a~~ia~~lgi------------------------------~~~~~p~~K~~~v~~l~~~-g~~v~~vGDg~nD~~al 422 (499)
T TIGR01494 374 VLTAKAIAKELGI------------------------------FARVTPEEKAALVEALQKK-GRVVAMTGDGVNDAPAL 422 (499)
T ss_pred HHHHHHHHHHcCc------------------------------eeccCHHHHHHHHHHHHHC-CCEEEEECCChhhHHHH
Confidence 9999999999996 5789999999999999998 89999999999999999
Q ss_pred hhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHH
Q 001638 764 HEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAV 843 (1039)
Q Consensus 764 ~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~~~~pl~~~ 843 (1039)
++|||||||| |+++||++|++|++..++.++++||+++++|++++.|.+++|++.+++++++.+
T Consensus 423 ~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~---------- 486 (499)
T TIGR01494 423 KKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAV---------- 486 (499)
T ss_pred HhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------
Confidence 9999999997 799999999999999999999999999999999999999999998888776442
Q ss_pred HHHHHHHHhhHHHHhH
Q 001638 844 QLLWVNMIMDTLGALA 859 (1039)
Q Consensus 844 qll~vnli~d~l~ala 859 (1039)
+|+++|+.++++
T Consensus 487 ----~~~~~~~~~~~~ 498 (499)
T TIGR01494 487 ----LNLVPPGLAALA 498 (499)
T ss_pred ----HHHHhcchhhhc
Confidence 888888877664
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-74 Score=696.22 Aligned_cols=524 Identities=27% Similarity=0.382 Sum_probs=433.3
Q ss_pred HHHHHHHhhccCCCCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeCC-eEEEEEcCCccc
Q 001638 177 MICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDG-YRKKLSIYDLVV 255 (1039)
Q Consensus 177 ~v~a~ls~~~~~~~~~~~~~~~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G-~~~~I~~~dLvv 255 (1039)
.++++++++.+ .|.++..+++.+++..++....+++.++..+++.+ ..+..++|+||| ++++|+.++|+|
T Consensus 6 ~~~~~~~~~~~--------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~-~~~~~~~v~r~~g~~~~i~~~~l~~ 76 (556)
T TIGR01525 6 ALATIAAYAMG--------LVLEGALLLFLFLLGETLEERAKGRASDALSALLA-LAPSTARVLQGDGSEEEVPVEELQV 76 (556)
T ss_pred HHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEECCCeEEEEEHHHCCC
Confidence 34445555554 46666666666666666666666666666666654 345689999995 999999999999
Q ss_pred CcEEEEcCCCcccccEEEEeeCceeEeccCCCCCCCccccCCCCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhcc
Q 001638 256 GDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSE 335 (1039)
Q Consensus 256 GDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~ 335 (1039)
||+|.+++||+|||||++++|+. .||||+|||||.|+.|..++ .+|+||.+.+|+++++|+++|.+|+.|++.+.+.+
T Consensus 77 GDiv~v~~G~~iP~Dg~vi~g~~-~vdes~lTGEs~pv~k~~g~-~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~ 154 (556)
T TIGR01525 77 GDIVIVRPGERIPVDGVVISGES-EVDESALTGESMPVEKKEGD-EVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEE 154 (556)
T ss_pred CCEEEECCCCEeccceEEEecce-EEeehhccCCCCCEecCCcC-EEeeceEECCceEEEEEEEecccCHHHHHHHHHHH
Confidence 99999999999999999999985 89999999999999998765 49999999999999999999999999999999998
Q ss_pred CCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhH
Q 001638 336 GGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPL 415 (1039)
Q Consensus 336 ~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lpl 415 (1039)
...+++|+|+.+++++.++.++++++++++|++++.. . .+ ..+..++++++++|||+||+
T Consensus 155 ~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~---~--------~~---------~~~~~~~~vlv~~~P~al~l 214 (556)
T TIGR01525 155 AQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLAL---G--------AL---------GALYRALAVLVVACPCALGL 214 (556)
T ss_pred HhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---c--------cc---------hHHHHHHHHHhhccccchhe
Confidence 8889999999999999999999998888888765321 0 00 46778999999999999999
Q ss_pred HHHHHHHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHH
Q 001638 416 AVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVF 495 (1039)
Q Consensus 416 avtl~la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (1039)
++|++++.++++|.++|+++|+++++|+||++|++|||||||||+|+|+|.+++..+... . -.++.+
T Consensus 215 ~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-----~--------~~~~~l 281 (556)
T TIGR01525 215 ATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-----I--------SEEELL 281 (556)
T ss_pred hhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC-----c--------cHHHHH
Confidence 999999999999999999999999999999999999999999999999999987643320 0 011222
Q ss_pred HHHHHHHHhccCCceeecCCCCccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEEcCCCCeEE
Q 001638 496 NIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFR 575 (1039)
Q Consensus 496 ~~l~~~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~ 575 (1039)
.+ +.... ....||++.|+++++.+.+.+... +| +. ...++ .++.
T Consensus 282 ~~---a~~~e-------------~~~~hp~~~Ai~~~~~~~~~~~~~-----------~~--~~------~~~~~-~gi~ 325 (556)
T TIGR01525 282 AL---AAALE-------------QSSSHPLARAIVRYAKKRGLELPK-----------QE--DV------EEVPG-KGVE 325 (556)
T ss_pred HH---HHHHh-------------ccCCChHHHHHHHHHHhcCCCccc-----------cc--Ce------eEecC-CeEE
Confidence 21 11111 123589999999999887654321 11 00 01123 4566
Q ss_pred EEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeeccc
Q 001638 576 VFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIK 655 (1039)
Q Consensus 576 ~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i~ 655 (1039)
.++||+++..+..|+.. ..++.. ....++.++.++.+|+|++.++ .|.+++|.+.++
T Consensus 326 ~~~~g~~~~~lg~~~~~-~~~~~~-------~~~~~~~~~~~~~~g~~~~~v~---------------~~~~~~g~i~~~ 382 (556)
T TIGR01525 326 ATVDGQEEVRIGNPRLL-ELAAEP-------ISASPDLLNEGESQGKTVVFVA---------------VDGELLGVIALR 382 (556)
T ss_pred EEECCeeEEEEecHHHH-hhcCCC-------chhhHHHHHHHhhCCcEEEEEE---------------ECCEEEEEEEec
Confidence 67777767777777643 111111 1122345667889999999998 356899999999
Q ss_pred CCCCccHHHHHHHHHHCC-CEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhh
Q 001638 656 DPVRPGVREAVETCLAAG-ITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTD 734 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aG-i~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 734 (1039)
|++|||++++++.|+++| +++.|+|||+..++.++++++|+.. +|+++.|++
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~---------------------------~f~~~~p~~ 435 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE---------------------------VHAELLPED 435 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe---------------------------eeccCCHHH
Confidence 999999999999999999 9999999999999999999999965 899999999
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHH
Q 001638 735 KYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFV 814 (1039)
Q Consensus 735 K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i 814 (1039)
|.++++.+++. ++.|+|+|||.||++|+++||||++|| ++++.+++.||+++.+|+++.+..++++||++++||++++
T Consensus 436 K~~~v~~l~~~-~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl 513 (556)
T TIGR01525 436 KLAIVKELQEE-GGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNL 513 (556)
T ss_pred HHHHHHHHHHc-CCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988 889999999999999999999999999 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 001638 815 QFQLTVNIVALVINFVAA 832 (1039)
Q Consensus 815 ~f~l~~Ni~~i~~~~~~~ 832 (1039)
.|++++|++++++++.+.
T Consensus 514 ~~a~~~N~~~i~~a~~g~ 531 (556)
T TIGR01525 514 AWALGYNLVAIPLAAGGL 531 (556)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999988776543
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-75 Score=681.86 Aligned_cols=525 Identities=24% Similarity=0.356 Sum_probs=430.5
Q ss_pred CCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------cCCceEEEEeCCe-EEEEEcCCcccCcEEEEcCCCc
Q 001638 194 PDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKE------KKNLIVQVTRDGY-RKKLSIYDLVVGDIVHLSIGDQ 266 (1039)
Q Consensus 194 ~~~~~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~------~~~~~v~ViR~G~-~~~I~~~dLvvGDIV~l~~Gd~ 266 (1039)
+..+||...|++.++.+. +|.+.+...+..+. ..+.++.++.+|+ .++|+++.+++||+|.+.||++
T Consensus 337 ~~tfFdt~~MLi~fi~lg------r~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~k 410 (951)
T KOG0207|consen 337 PPTFFDTSPMLITFITLG------RWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEK 410 (951)
T ss_pred cchhccccHHHHHHHHHH------HHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCc
Confidence 456888877776555433 66665554443321 3466888898886 8999999999999999999999
Q ss_pred ccccEEEEeeCceeEeccCCCCCCCccccCCCCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCCCchHHH
Q 001638 267 VPADGILISGYSLTIDESSLSGETEPVHINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVK 346 (1039)
Q Consensus 267 VPaDgill~g~~l~VDES~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~ 346 (1039)
||+||++++|++ +||||++|||+.||.|..+++ +.+||.+.+|...+.++.+|.+|.+++|.+++++++..++|+|+.
T Consensus 411 iPvDG~Vv~Gss-~VDEs~iTGEs~PV~Kk~gs~-ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~ 488 (951)
T KOG0207|consen 411 IPVDGVVVDGSS-EVDESLITGESMPVPKKKGST-VIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQL 488 (951)
T ss_pred cccccEEEeCce-eechhhccCCceecccCCCCe-eeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHH
Confidence 999999999998 999999999999999998877 999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHH
Q 001638 347 LNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMK 426 (1039)
Q Consensus 347 l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~ 426 (1039)
+|+++.++++..+++++.+|++|.+.... .......| ...+..+|..+++++++||||+|.||+|++...+..
T Consensus 489 aDkia~yFvP~Vi~lS~~t~~~w~~~g~~---~~~~~~~~----~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatg 561 (951)
T KOG0207|consen 489 ADKIAGYFVPVVIVLSLATFVVWILIGKI---VFKYPRSF----FDAFSHAFQLAISVLVIACPCALGLATPTAVMVATG 561 (951)
T ss_pred HHHhhhcCCchhhHHHHHHHHHHHHHccc---cccCcchh----hHHHHHHHHhhheEEEEECchhhhcCCceEEEEEec
Confidence 99999999999999999999988654321 11111112 245677889999999999999999999999999999
Q ss_pred HhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHHHHHHHhcc
Q 001638 427 KLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNT 506 (1039)
Q Consensus 427 ~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 506 (1039)
..+++|+|+|..+++|++.+++++.||||||||+|+++|+++....+. ++.+..-.+..+.-
T Consensus 562 vgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~---------------~~~~e~l~~v~a~E--- 623 (951)
T KOG0207|consen 562 VGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP---------------ISLKEALALVAAME--- 623 (951)
T ss_pred hhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc---------------ccHHHHHHHHHHHh---
Confidence 999999999999999999999999999999999999999998775542 12221111111111
Q ss_pred CCceeecCCCCccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHH
Q 001638 507 GSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIIL 586 (1039)
Q Consensus 507 ~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il 586 (1039)
..+.||..+|+++||+..... ...........|..+.+...+ ...+ .. .+-|.-+.+.
T Consensus 624 ------------s~SeHPig~AIv~yak~~~~~----~~~~~~~~~~~~pg~g~~~~~--~~~~-~~---i~iGN~~~~~ 681 (951)
T KOG0207|consen 624 ------------SGSEHPIGKAIVDYAKEKLVE----PNPEGVLSFEYFPGEGIYVTV--TVDG-NE---VLIGNKEWMS 681 (951)
T ss_pred ------------cCCcCchHHHHHHHHHhcccc----cCccccceeecccCCCcccce--EEee-eE---EeechHHHHH
Confidence 112489999999999977611 111122233334443333122 2222 12 3346555443
Q ss_pred hhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeecccCCCCccHHHHH
Q 001638 587 NMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAV 666 (1039)
Q Consensus 587 ~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI 666 (1039)
.+|...+ +.+++..++....|..+.+++ -|.+++|+++++|++|||+..+|
T Consensus 682 --------r~~~~~~------~~i~~~~~~~e~~g~tvv~v~---------------vn~~l~gv~~l~D~vr~~a~~av 732 (951)
T KOG0207|consen 682 --------RNGCSIP------DDILDALTESERKGQTVVYVA---------------VNGQLVGVFALEDQVRPDAALAV 732 (951)
T ss_pred --------hcCCCCc------hhHHHhhhhHhhcCceEEEEE---------------ECCEEEEEEEeccccchhHHHHH
Confidence 2332221 236667777788999999888 46789999999999999999999
Q ss_pred HHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhcC
Q 001638 667 ETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVF 746 (1039)
Q Consensus 667 ~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~ 746 (1039)
+.||+.|+++.|+||||..+|+++|+++||.. |+|.+.|+||.+.|+.+|++
T Consensus 733 ~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~---------------------------V~aev~P~~K~~~Ik~lq~~- 784 (951)
T KOG0207|consen 733 AELKSMGIKVVMLTGDNDAAARSVAQQVGIDN---------------------------VYAEVLPEQKAEKIKEIQKN- 784 (951)
T ss_pred HHHHhcCceEEEEcCCCHHHHHHHHHhhCcce---------------------------EEeccCchhhHHHHHHHHhc-
Confidence 99999999999999999999999999999876 99999999999999999999
Q ss_pred CCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 001638 747 KEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALV 826 (1039)
Q Consensus 747 g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~ 826 (1039)
+++|+|+|||+||+|||.+|||||||| .|+++|.|+||+||+.+|+..++.++..+|++..|||.|+.|+++||+++++
T Consensus 785 ~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~Ip 863 (951)
T KOG0207|consen 785 GGPVAMVGDGINDAPALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIP 863 (951)
T ss_pred CCcEEEEeCCCCccHHHHhhccceeec-cccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhh
Confidence 899999999999999999999999999 8899999999999999999999999999999999999999999999999998
Q ss_pred HHHHH
Q 001638 827 INFVA 831 (1039)
Q Consensus 827 ~~~~~ 831 (1039)
++...
T Consensus 864 IAagv 868 (951)
T KOG0207|consen 864 IAAGV 868 (951)
T ss_pred hheec
Confidence 87543
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-73 Score=681.63 Aligned_cols=498 Identities=27% Similarity=0.393 Sum_probs=406.4
Q ss_pred CcccchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcccCCceEEEEeC-CeEEEEEcCCcccCcEEEEcCCCcccccEE
Q 001638 195 DGVYDGLGIVLSILLVV-IVTAVSDYKQSLQFKALDKEKKNLIVQVTRD-GYRKKLSIYDLVVGDIVHLSIGDQVPADGI 272 (1039)
Q Consensus 195 ~~~~d~~~i~~~lllv~-~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~-G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgi 272 (1039)
++||++.+++++++++. ++.....++.++..++|.+ ..+..++|+|+ |++++|++++|+|||+|.+++||+|||||+
T Consensus 51 ~~~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~-~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~ 129 (562)
T TIGR01511 51 HTFFDASAMLITFILLGRWLEMLAKGRASDALSKLAK-LQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGT 129 (562)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceE
Confidence 47889888766555443 3333333444444444544 34567888885 777999999999999999999999999999
Q ss_pred EEeeCceeEeccCCCCCCCccccCCCCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCCCchHHHHhHHHH
Q 001638 273 LISGYSLTIDESSLSGETEPVHINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVAT 352 (1039)
Q Consensus 273 ll~g~~l~VDES~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a~ 352 (1039)
+++|++ .||||+|||||.|+.|..++. +|+||.+.+|+++++|+++|.+|.+|++.+++.+++.+++|+|+.+++++.
T Consensus 130 v~~g~~-~vdes~lTGEs~pv~k~~gd~-V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~ 207 (562)
T TIGR01511 130 VIEGES-EVDESLVTGESLPVPKKVGDP-VIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAG 207 (562)
T ss_pred EEECce-EEehHhhcCCCCcEEcCCCCE-EEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHH
Confidence 999987 899999999999999998766 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccc
Q 001638 353 VIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDK 432 (1039)
Q Consensus 353 ~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ 432 (1039)
++.+++++++++++++|. ..+..++++++++|||+|++++|+++..++.+++++|
T Consensus 208 ~~~~~v~~~a~~~~~~~~-------------------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~g 262 (562)
T TIGR01511 208 YFVPVVIAIALITFVIWL-------------------------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNG 262 (562)
T ss_pred HHHHHHHHHHHHHHHHHH-------------------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCC
Confidence 999988888877776532 2466789999999999999999999999999999999
Q ss_pred cccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHHHHHHHhccCCceee
Q 001638 433 ALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVK 512 (1039)
Q Consensus 433 ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 512 (1039)
+++|+++++|+|+++|+||||||||||+|+|+|.++...+... .++.+.+ +....
T Consensus 263 Ilik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~---------------~~~~l~~---aa~~e------- 317 (562)
T TIGR01511 263 VLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDRD---------------RTELLAL---AAALE------- 317 (562)
T ss_pred eEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCCC---------------HHHHHHH---HHHHh-------
Confidence 9999999999999999999999999999999999986543210 1222222 11111
Q ss_pred cCCCCccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhh
Q 001638 513 DKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKI 592 (1039)
Q Consensus 513 ~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~ 592 (1039)
..+.||.++|+++++.+.+.+... .+-...+| .+.+... .+ + .-+..|+++.+.+
T Consensus 318 ------~~s~HPia~Ai~~~~~~~~~~~~~----~~~~~~~~----g~Gi~~~--~~--g--~~~~iG~~~~~~~----- 372 (562)
T TIGR01511 318 ------AGSEHPLAKAIVSYAKEKGITLVE----VSDFKAIP----GIGVEGT--VE--G--TKIQLGNEKLLGE----- 372 (562)
T ss_pred ------ccCCChHHHHHHHHHHhcCCCcCC----CCCeEEEC----CceEEEE--EC--C--EEEEEECHHHHHh-----
Confidence 112489999999999877654221 11111111 1222221 12 2 1234566655421
Q ss_pred hccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHC
Q 001638 593 INADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAA 672 (1039)
Q Consensus 593 ~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~a 672 (1039)
+|. .++ .+.++|.+++.++ .|.+++|+++++|++|||++++|++|++.
T Consensus 373 ---~~~--~~~------------~~~~~g~~~~~~~---------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~ 420 (562)
T TIGR01511 373 ---NAI--KID------------GKAEQGSTSVLVA---------------VNGELAGVFALEDQLRPEAKEVIQALKRR 420 (562)
T ss_pred ---CCC--CCC------------hhhhCCCEEEEEE---------------ECCEEEEEEEecccccHHHHHHHHHHHHc
Confidence 111 111 1346788888877 56789999999999999999999999999
Q ss_pred CCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEE
Q 001638 673 GITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAV 752 (1039)
Q Consensus 673 Gi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~ 752 (1039)
|+++.|+|||+..+++++++++||. +++++.|++|.++++.++++ ++.|+|
T Consensus 421 Gi~v~ilSgd~~~~a~~ia~~lgi~----------------------------~~~~~~p~~K~~~v~~l~~~-~~~v~~ 471 (562)
T TIGR01511 421 GIEPVMLTGDNRKTAKAVAKELGIN----------------------------VRAEVLPDDKAALIKELQEK-GRVVAM 471 (562)
T ss_pred CCeEEEEcCCCHHHHHHHHHHcCCc----------------------------EEccCChHHHHHHHHHHHHc-CCEEEE
Confidence 9999999999999999999999993 67888999999999999998 899999
Q ss_pred EcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001638 753 TGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAA 832 (1039)
Q Consensus 753 ~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~ 832 (1039)
+|||.||+||+++||+||+|| .|++.+++.||++++++++..+..++++||+++++|++|+.|++++|++.+++++.+.
T Consensus 472 VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~~ 550 (562)
T TIGR01511 472 VGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVL 550 (562)
T ss_pred EeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999 8999999999999999999999999999999999999999999999999888776443
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-73 Score=679.12 Aligned_cols=504 Identities=26% Similarity=0.369 Sum_probs=416.9
Q ss_pred HHHHHHHHhhccCCCCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCccc
Q 001638 176 LMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVV 255 (1039)
Q Consensus 176 l~v~a~ls~~~~~~~~~~~~~~~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvv 255 (1039)
+.++++++++.+ .|+|+..+++.+++..+++.+.+++.++..+++.+ ..+.+++|+|||++++|++++|+|
T Consensus 5 ~~~a~~~~~~~~--------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~-~~~~~~~v~r~g~~~~i~~~~l~~ 75 (536)
T TIGR01512 5 MALAALGAVAIG--------EYLEGALLLLLFSIGETLEEYASGRARRALKALME-LAPDTARVLRGGSLEEVAVEELKV 75 (536)
T ss_pred HHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEECCEEEEEEHHHCCC
Confidence 445666666665 58898777776666666666666666666666665 346789999999999999999999
Q ss_pred CcEEEEcCCCcccccEEEEeeCceeEeccCCCCCCCccccCCCCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhcc
Q 001638 256 GDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSE 335 (1039)
Q Consensus 256 GDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~ 335 (1039)
||+|.+++||+|||||++++|+. .||||+|||||.|+.|..++ .+|+||.+.+|+++++|++||.+|++|++.+++.+
T Consensus 76 GDiv~v~~G~~iP~Dg~ii~g~~-~vdes~lTGEs~pv~k~~g~-~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~ 153 (536)
T TIGR01512 76 GDVVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKAPGD-EVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEE 153 (536)
T ss_pred CCEEEEcCCCEeecceEEEeCcE-EEEecccCCCCCcEEeCCCC-EEEeeeEECCceEEEEEEEeccccHHHHHHHHHHH
Confidence 99999999999999999999976 89999999999999998765 49999999999999999999999999999999998
Q ss_pred CCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhH
Q 001638 336 GGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPL 415 (1039)
Q Consensus 336 ~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lpl 415 (1039)
...+++|+|+.+++++.++.++.+++++++++++.. .. .| ...+..++++++++|||+||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--------~~--------~~~~~~~~svlv~~~P~aL~l 214 (536)
T TIGR01512 154 AQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGL---LK--------RW--------PFWVYRALVLLVVASPCALVI 214 (536)
T ss_pred HhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hc--------cc--------HHHHHHHHHHHhhcCcccccc
Confidence 888999999999999999999988888776665421 10 11 125777899999999999999
Q ss_pred HHHHHHHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHH
Q 001638 416 AVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVF 495 (1039)
Q Consensus 416 avtl~la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (1039)
++|++++.++++|.++|+++|+++++|++|++|++|||||||||+|+|+|.+++.. +.+
T Consensus 215 a~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---------------------~~l 273 (536)
T TIGR01512 215 SAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA---------------------EVL 273 (536)
T ss_pred chHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH---------------------HHH
Confidence 99999999999999999999999999999999999999999999999999987431 112
Q ss_pred HHHHHHHHhccCCceeecCCCCccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEEcCCCCeEE
Q 001638 496 NIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFR 575 (1039)
Q Consensus 496 ~~l~~~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~ 575 (1039)
. .+.... ....||.+.|+++++.+.+ . ......+|- + ++.....+ ..
T Consensus 274 ~---~a~~~e-------------~~~~hp~~~Ai~~~~~~~~-~-------~~~~~~~~g----~--gi~~~~~g-~~-- 320 (536)
T TIGR01512 274 R---LAAAAE-------------QASSHPLARAIVDYARKRE-N-------VESVEEVPG----E--GVRAVVDG-GE-- 320 (536)
T ss_pred H---HHHHHh-------------ccCCCcHHHHHHHHHHhcC-C-------CcceEEecC----C--eEEEEECC-eE--
Confidence 1 111111 1235899999999987654 1 111122221 1 11111122 22
Q ss_pred EEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeeccc
Q 001638 576 VFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIK 655 (1039)
Q Consensus 576 ~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i~ 655 (1039)
+..|+++.+.+. + + ..+..+|.+++.++ .|..++|.+.++
T Consensus 321 -~~ig~~~~~~~~--------~----~------------~~~~~~~~~~~~v~---------------~~~~~~g~i~~~ 360 (536)
T TIGR01512 321 -VRIGNPRSLEAA--------V----G------------ARPESAGKTIVHVA---------------RDGTYLGYILLS 360 (536)
T ss_pred -EEEcCHHHHhhc--------C----C------------cchhhCCCeEEEEE---------------ECCEEEEEEEEe
Confidence 234766543211 1 0 03455677776665 467899999999
Q ss_pred CCCCccHHHHHHHHHHCCC-EEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhh
Q 001638 656 DPVRPGVREAVETCLAAGI-TVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTD 734 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi-~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 734 (1039)
|++|||++++++.|+++|+ ++.|+|||+..+++++++++||.. +|+++.|++
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~---------------------------~f~~~~p~~ 413 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE---------------------------VHAELLPED 413 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh---------------------------hhhccCcHH
Confidence 9999999999999999999 999999999999999999999976 788999999
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHH
Q 001638 735 KYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFV 814 (1039)
Q Consensus 735 K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i 814 (1039)
|..+++.+++. ++.|+|+|||.||+||+++||+|++||.+|++.++++||+++++|++..+.+++++||++++||++|+
T Consensus 414 K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl 492 (536)
T TIGR01512 414 KLEIVKELREK-YGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNV 492 (536)
T ss_pred HHHHHHHHHhc-CCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998 89999999999999999999999999977899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 001638 815 QFQLTVNIVALVINFVA 831 (1039)
Q Consensus 815 ~f~l~~Ni~~i~~~~~~ 831 (1039)
.|++.+|++++++++++
T Consensus 493 ~~a~~~n~~~i~~a~~G 509 (536)
T TIGR01512 493 VIALGIILLLILLALFG 509 (536)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999887764
|
. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-71 Score=701.01 Aligned_cols=510 Identities=25% Similarity=0.353 Sum_probs=415.6
Q ss_pred CcccchhHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEE
Q 001638 195 DGVYDGLGIVLSILLV-VIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGIL 273 (1039)
Q Consensus 195 ~~~~d~~~i~~~lllv-~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgil 273 (1039)
+.|||..++++.++++ -++......+..+..++|.+ ..+..++|+|||++++|+.++|+|||+|.+++||+|||||++
T Consensus 283 ~~~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~-l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v 361 (834)
T PRK10671 283 HLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLD-LTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEI 361 (834)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEE
Confidence 3488876665544332 22333333333333334433 346689999999999999999999999999999999999999
Q ss_pred EeeCceeEeccCCCCCCCccccCCCCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCCCchHHHHhHHHHH
Q 001638 274 ISGYSLTIDESSLSGETEPVHINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATV 353 (1039)
Q Consensus 274 l~g~~l~VDES~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a~~ 353 (1039)
++|+. .||||+|||||.|+.|..++. +|+||.+.+|.++++|+++|.+|.+|+|.+++++++..++|+|+..++++.+
T Consensus 362 ~~g~~-~vdeS~lTGEs~pv~k~~gd~-V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~ 439 (834)
T PRK10671 362 TQGEA-WLDEAMLTGEPIPQQKGEGDS-VHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAV 439 (834)
T ss_pred EEceE-EEeehhhcCCCCCEecCCCCE-EEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHH
Confidence 99975 899999999999999988765 9999999999999999999999999999999999888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhcccc
Q 001638 354 IGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKA 433 (1039)
Q Consensus 354 i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~i 433 (1039)
+.++.++++++++++|.+ .+ .+ ..+...+..++++++++|||+|++++|+++..++.+++++|+
T Consensus 440 ~v~~v~~~a~~~~~~~~~---~~--------~~-----~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gi 503 (834)
T PRK10671 440 FVPVVVVIALVSAAIWYF---FG--------PA-----PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGV 503 (834)
T ss_pred HHHHHHHHHHHHHHHHHH---hC--------Cc-----hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCe
Confidence 999999888888776532 11 00 123456778999999999999999999999999999999999
Q ss_pred ccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHHHHHHHhccCCceeec
Q 001638 434 LVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKD 513 (1039)
Q Consensus 434 lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 513 (1039)
|+|+++++|+|+++|++|||||||||+|+|+|.+++..+.. ++. +.+..+.+.++.
T Consensus 504 lvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~----------------~~~--~~l~~a~~~e~~------ 559 (834)
T PRK10671 504 LVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV----------------DEA--QALRLAAALEQG------ 559 (834)
T ss_pred EEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC----------------CHH--HHHHHHHHHhCC------
Confidence 99999999999999999999999999999999987643321 111 122222222221
Q ss_pred CCCCccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhh
Q 001638 514 KDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKII 593 (1039)
Q Consensus 514 ~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~ 593 (1039)
+.||.++|+++++...... ...+|.....+ ++-...+ |. .+++|+++.+...
T Consensus 560 -------s~hp~a~Ai~~~~~~~~~~-----------~~~~~~~~~g~-Gv~~~~~--g~--~~~~G~~~~~~~~----- 611 (834)
T PRK10671 560 -------SSHPLARAILDKAGDMTLP-----------QVNGFRTLRGL-GVSGEAE--GH--ALLLGNQALLNEQ----- 611 (834)
T ss_pred -------CCCHHHHHHHHHHhhCCCC-----------CcccceEecce-EEEEEEC--CE--EEEEeCHHHHHHc-----
Confidence 3589999999987633211 01122222211 2211122 32 3466998866321
Q ss_pred ccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCC
Q 001638 594 NADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAG 673 (1039)
Q Consensus 594 ~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aG 673 (1039)
+ ++ ++.+.+.++.++++|.+++.+++ |..++|++++.|++||++++++++|++.|
T Consensus 612 ---~----~~---~~~~~~~~~~~~~~g~~~v~va~---------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~g 666 (834)
T PRK10671 612 ---Q----VD---TKALEAEITAQASQGATPVLLAV---------------DGKAAALLAIRDPLRSDSVAALQRLHKAG 666 (834)
T ss_pred ---C----CC---hHHHHHHHHHHHhCCCeEEEEEE---------------CCEEEEEEEccCcchhhHHHHHHHHHHCC
Confidence 1 11 12355667788899999999984 45789999999999999999999999999
Q ss_pred CEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEE
Q 001638 674 ITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVT 753 (1039)
Q Consensus 674 i~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~ 753 (1039)
+++.|+|||+..+++++++++||.. +++++.|++|.+.++.++++ ++.|+|+
T Consensus 667 i~v~~~Tgd~~~~a~~ia~~lgi~~---------------------------~~~~~~p~~K~~~i~~l~~~-~~~v~~v 718 (834)
T PRK10671 667 YRLVMLTGDNPTTANAIAKEAGIDE---------------------------VIAGVLPDGKAEAIKRLQSQ-GRQVAMV 718 (834)
T ss_pred CeEEEEcCCCHHHHHHHHHHcCCCE---------------------------EEeCCCHHHHHHHHHHHhhc-CCEEEEE
Confidence 9999999999999999999999975 89999999999999999998 8999999
Q ss_pred cCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001638 754 GNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINF 829 (1039)
Q Consensus 754 GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~ 829 (1039)
|||.||+||+++||+||+|| +|++.++++||+++++|++..|..++++||+++.||++|+.|.+.||++++++++
T Consensus 719 GDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 719 GDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred eCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 8999999999999999999999999999999999999999999999999998775
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-69 Score=617.36 Aligned_cols=816 Identities=21% Similarity=0.276 Sum_probs=556.6
Q ss_pred CCCCHH-HHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCcccchhHHHHHHHHHH
Q 001638 133 DGVASE-EVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVV 211 (1039)
Q Consensus 133 ~GL~~~-~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~d~~~i~~~lllv~ 211 (1039)
.|...+ +++.-.++||.|++..+. ++|..++.|.-..|+..+..+|..+... .+-||.++.. ++.++
T Consensus 161 ~G~~~~~~i~~a~~~~G~N~fdi~v-PtF~eLFkE~A~aPfFVFQVFcvgLWCL--------DeyWYySlFt---LfMli 228 (1160)
T KOG0209|consen 161 TGHEEESEIKLAKHKYGKNKFDIVV-PTFSELFKEHAVAPFFVFQVFCVGLWCL--------DEYWYYSLFT---LFMLI 228 (1160)
T ss_pred cCcchHHHHHHHHHHhcCCccccCC-ccHHHHHHHhccCceeeHhHHhHHHHHh--------HHHHHHHHHH---HHHHH
Confidence 566643 455555679999998765 5799999998888887777777776553 2357765433 33344
Q ss_pred HHHHHHHHHHHHHHHHHhccc-CCceEEEEeCCeEEEEEcCCcccCcEEEEcC---CCcccccEEEEeeCceeEeccCCC
Q 001638 212 IVTAVSDYKQSLQFKALDKEK-KNLIVQVTRDGYRKKLSIYDLVVGDIVHLSI---GDQVPADGILISGYSLTIDESSLS 287 (1039)
Q Consensus 212 ~v~a~~~~~~~~~~~~l~~~~-~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~---Gd~VPaDgill~g~~l~VDES~LT 287 (1039)
.+.+..-+++.+......+.. ++..+.|+|+++|+.+..+||+|||+|.+.. ...||||.+++.|++ .|||++||
T Consensus 229 ~fE~tlV~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gsc-iVnEaMLt 307 (1160)
T KOG0209|consen 229 AFEATLVKQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGSC-IVNEAMLT 307 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecce-eechhhhc
Confidence 455555566666666665543 3568999999999999999999999999987 458999999999976 79999999
Q ss_pred CCCCccccC----------------CCCceeecccEEe-------------eCCeEEEEEEeccchhhHHHHHHhccCCC
Q 001638 288 GETEPVHIN----------------RDRPFLLSGTKVQ-------------DGSGKMLVTSVGMRTEWGRLMVTLSEGGE 338 (1039)
Q Consensus 288 GEs~pv~k~----------------~~~~~l~sGt~v~-------------~G~~~~~V~~vG~~T~~gki~~~~~~~~~ 338 (1039)
|||.|.-|. .+..++|.||+++ +|-+.+.|+.||.+|..|++++.+--..+
T Consensus 308 GESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~ae 387 (1160)
T KOG0209|consen 308 GESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAE 387 (1160)
T ss_pred CCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecce
Confidence 999998875 1345799999997 57789999999999999999998876555
Q ss_pred CCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHH
Q 001638 339 DETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVT 418 (1039)
Q Consensus 339 ~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavt 418 (1039)
+-|.-. ...++ +++.+++|.+....|.+....... ...-.+.|.-.+-|+...+|.-||+-++
T Consensus 388 rvTaNn-----~Etf~----FILFLlVFAiaAa~Yvwv~Gskd~--------~RsrYKL~LeC~LIlTSVvPpELPmELS 450 (1160)
T KOG0209|consen 388 RVTANN-----RETFI----FILFLLVFAIAAAGYVWVEGSKDP--------TRSRYKLFLECTLILTSVVPPELPMELS 450 (1160)
T ss_pred eeeecc-----HHHHH----HHHHHHHHHHHhhheEEEecccCc--------chhhhheeeeeeEEEeccCCCCCchhhh
Confidence 444322 22221 112223333322222211111110 0111233445566677789999999999
Q ss_pred HHHHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHH
Q 001638 419 LSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIF 498 (1039)
Q Consensus 419 l~la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 498 (1039)
++.-.+...+.|.++.+..+-.+.-.|++|..|||||||||+..|.|.++--.... .......+..+.+.+..
T Consensus 451 mAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~------~~~~~~~s~~p~~t~~v- 523 (1160)
T KOG0209|consen 451 MAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSAD------EGALTPASKAPNETVLV- 523 (1160)
T ss_pred HHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCC------cccccchhhCCchHHHH-
Confidence 99999999999999999999999999999999999999999999999987432211 11111122233334333
Q ss_pred HHHHHhccCCceeecCCCCccccCCchHHHHHHHHHHh-C-CCccccc----ccccEEEEecCCCCCCceEEEEEcCCC-
Q 001638 499 LQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLIL-G-GDSTFHR----EESAIVKVEPFNSVKKRMSVLVSLPNN- 571 (1039)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~-g-~~~~~~~----~~~~il~~~pF~s~rkrmsvvv~~~~~- 571 (1039)
++.||+-....+ ...|||.|+|.+++.... . .+....+ ...+|.+.+.|+|.-|||+++....+.
T Consensus 524 ---lAscHsLv~le~-----~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g 595 (1160)
T KOG0209|consen 524 ---LASCHSLVLLED-----KLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPG 595 (1160)
T ss_pred ---HHHHHHHHHhcC-----cccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCC
Confidence 333443222111 278999999999865211 1 1111111 247789999999999999999876531
Q ss_pred --CeEEEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCC------CCcCCCCC
Q 001638 572 --GGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGN------HKAESIPE 643 (1039)
Q Consensus 572 --~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~------~~~~~~~e 643 (1039)
-++.+.+|||||.|-.+-+. ..+.+.+...+++++|.||||++||++..- +.+.+..|
T Consensus 596 ~s~k~~~aVKGAPEvi~~ml~d--------------vP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vE 661 (1160)
T KOG0209|consen 596 SSEKYFVAVKGAPEVIQEMLRD--------------VPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVE 661 (1160)
T ss_pred CceEEEEEecCCHHHHHHHHHh--------------CchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhh
Confidence 36889999999999876553 235677888999999999999999999732 13446789
Q ss_pred CCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCC-----------------------
Q 001638 644 NNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG----------------------- 700 (1039)
Q Consensus 644 ~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~----------------------- 700 (1039)
+||+|.|.+.|.-|+|+|++++|+.+++.+.+|+|+||||+.||.++|+++||....
T Consensus 662 sdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t 741 (1160)
T KOG0209|consen 662 SDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGT 741 (1160)
T ss_pred hcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCc
Confidence 999999999999999999999999999999999999999999999999999997521
Q ss_pred ------------------CceeeCcccccCCH-HHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHH
Q 001638 701 ------------------GLAIEGTDFRSKNP-QEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAP 761 (1039)
Q Consensus 701 ------------------~~vi~G~~~~~~~~-~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~ 761 (1039)
+++++|..+..+.. +.+.++++.+.||||+.|.||..++..|++. |++++|+|||+||+.
T Consensus 742 ~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~-Gy~TLMCGDGTNDVG 820 (1160)
T KOG0209|consen 742 IVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKL-GYVTLMCGDGTNDVG 820 (1160)
T ss_pred eeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhc-CeEEEEecCCCcchh
Confidence 34666666665543 4678889999999999999999999999999 999999999999999
Q ss_pred HhhhCCcceeecCCCcHHHHh-----------------------------------------------------------
Q 001638 762 ALHEADIGLAMGIAGTEVAKE----------------------------------------------------------- 782 (1039)
Q Consensus 762 aL~~AdVGIamgi~gt~~ak~----------------------------------------------------------- 782 (1039)
|||+||||||.= ++++..+.
T Consensus 821 ALK~AhVGVALL-~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~ 899 (1160)
T KOG0209|consen 821 ALKQAHVGVALL-NNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDK 899 (1160)
T ss_pred hhhhcccceehh-cCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcc
Confidence 999999999975 33331100
Q ss_pred ------------ccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHH
Q 001638 783 ------------NADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAVQLLWVNM 850 (1039)
Q Consensus 783 ------------~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~~~~pl~~~qll~vnl 850 (1039)
+|.+.----+.++|-++|+.||+..-+.-|.... |.-|.... ....+.+..-..-+...|...--+
T Consensus 900 ~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctLVtTlQMfKI-LALN~Lis-AYslSvlyldGVKfgD~QaTisGl 977 (1160)
T KOG0209|consen 900 GDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTLVTTLQMFKI-LALNCLIS-AYSLSVLYLDGVKFGDTQATISGL 977 (1160)
T ss_pred cCccccccccccccccccccchHHHHHHHHHhcchhHHHHHHHHHH-HHHHHHHH-HHHHHHhhhcCceecchhHhHHHH
Confidence 0111111125778889999999998875444332 22232211 112223333445666677655444
Q ss_pred HhhHHHHhHhccCCCCccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhccccc------ccCCCCccchhh
Q 001638 851 IMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIVLGVLTFCGKKIL------KLSGPNATLILN 924 (1039)
Q Consensus 851 i~d~l~alala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~i~q~~v~~~l~~~~~~~~------~~~~~~~~~~~~ 924 (1039)
++ ...-+.+....|-+.+-++.|. .+++|.-....+++|-..++..++++.-.....- .++....+...+
T Consensus 978 Ll-a~cFlfISrskPLetLSkeRP~---~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~PsllN 1053 (1160)
T KOG0209|consen 978 LL-AACFLFISRSKPLETLSKERPL---PNIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLLN 1053 (1160)
T ss_pred HH-HHHHhheecCCchhhHhhcCCC---CCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhhh
Confidence 43 2345666678888888887774 4577766666666665555554444322111100 001111233455
Q ss_pred HHHHHHHHHHHHHH-HHHhccccccccccccchhHHHHHHHHHHHHHHHHHH-h---hhhhhhcccCCChHHH----HHH
Q 001638 925 TFIFNSFVFCQVFN-EINSRDMEKINVFRGIFSSWVFIAVLVATVGFQVIIV-E---LLGTFATTVPLNWKLW----LAS 995 (1039)
Q Consensus 925 T~~f~~~v~~qv~n-~~~~r~~~~~~~f~~~~~n~~f~~~~~~~~~~q~~~v-~---~~~~~~~~~~l~~~~w----~~~ 995 (1039)
|.+|..-...|+.. ++|.+ ..++-+.+..|+.+++.+++...+-+.++ . =+...|..++++-.+- .+.
T Consensus 1054 t~vyiisl~~QvsTFAVNY~---G~PF~Esl~eNK~l~y~ll~~~~~~~~l~tg~~peLn~~~~lV~mp~~fk~~ll~~l 1130 (1160)
T KOG0209|consen 1054 TTVYIISLAQQVSTFAVNYQ---GRPFRESLRENKGLLYGLLGSAGVIIALATGSSPELNEKFELVDMPQDFKIKLLAVL 1130 (1160)
T ss_pred hHHHHHHHHHHHHHhhhhcc---CcchhhhhhhccchHHHHHHHHHHHHHHHhccChhHHhheeeecccHHHHHHHHHHH
Confidence 55555444455542 34443 33455578888877766665544333332 2 2566777777763322 223
Q ss_pred HHHHHHHHHHHHHHhhhccCCcc
Q 001638 996 VVIGAISMPFGVLLKCIPVGTCT 1018 (1039)
Q Consensus 996 i~~~~~~~~~~~~~k~i~~~~~~ 1018 (1039)
++--+++++++.+.|++-...+|
T Consensus 1131 ~lD~v~c~~~er~~~f~f~~~k~ 1153 (1160)
T KOG0209|consen 1131 VLDFVLCYLVERVLKFFFGDHKP 1153 (1160)
T ss_pred HHHHHHHHHHHHHHHHHccCCCc
Confidence 33445678888888876555555
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-59 Score=515.27 Aligned_cols=540 Identities=28% Similarity=0.391 Sum_probs=407.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCceEEEEeC-CeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCceeEeccCCCCC
Q 001638 211 VIVTAVSDYKQSLQFKALDKEKKNLIVQVTRD-GYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGE 289 (1039)
Q Consensus 211 ~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~-G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGE 289 (1039)
-+.+++.|.+-+.|...|.+.+.....+++++ |..+.|++.+|..||+|.++.||.||+||.+++|.. +||||.+|||
T Consensus 80 NfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAITGE 158 (681)
T COG2216 80 NFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGE 158 (681)
T ss_pred HHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhccCC
Confidence 34445566666667777776666667777776 899999999999999999999999999999999987 9999999999
Q ss_pred CCccccCCCCce--eecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHH
Q 001638 290 TEPVHINRDRPF--LLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFL 367 (1039)
Q Consensus 290 s~pv~k~~~~~~--l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~i 367 (1039)
|.||-|..++.+ +-.||.|.+.+.+.++++.-.+|.+-|+..+++.++.++||-+--++-+-. ++.+..+..+
T Consensus 159 SaPViresGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~-----~LTliFL~~~ 233 (681)
T COG2216 159 SAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLS-----GLTLIFLLAV 233 (681)
T ss_pred CcceeeccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHH-----HHHHHHHHHH
Confidence 999999876432 899999999999999999999999999999999999999997765553322 2211111111
Q ss_pred HHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccccccccchhhhcccce
Q 001638 368 VLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSA 447 (1039)
Q Consensus 368 v~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ilvr~~~a~E~Lg~v 447 (1039)
+ ..|....+... .. -.+..-++++|..+|-...-.++-.=..+|.|+.+.|++.++..|+|..|.+
T Consensus 234 ~--Tl~p~a~y~~g--------~~----~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDv 299 (681)
T COG2216 234 A--TLYPFAIYSGG--------GA----ASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDV 299 (681)
T ss_pred H--hhhhHHHHcCC--------CC----cCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCc
Confidence 1 11111111110 00 1133456788888998877777666677899999999999999999999999
Q ss_pred eEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHHHHHHHhccCCceeecCCCCccccCCchHH
Q 001638 448 SCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTER 527 (1039)
Q Consensus 448 ~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~p~e~ 527 (1039)
|++..|||||+|.|+-.-.+++..+.. +++ -+..+....+-. + ..|.-+
T Consensus 300 dtliLDKTGTIT~GnR~A~~f~p~~gv----------------~~~---~la~aa~lsSl~----D--------eTpEGr 348 (681)
T COG2216 300 DTLLLDKTGTITLGNRQASEFIPVPGV----------------SEE---ELADAAQLASLA----D--------ETPEGR 348 (681)
T ss_pred cEEEecccCceeecchhhhheecCCCC----------------CHH---HHHHHHHHhhhc----c--------CCCCcc
Confidence 999999999999988777666654432 111 122222222211 1 146667
Q ss_pred HHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhhccCCccccCCHHHH
Q 001638 528 AILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQR 607 (1039)
Q Consensus 528 All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~ 607 (1039)
.+++.|++++.+........ .....||+.+.|++++-. ++ + +-.-|||.+.+....+. .+|. . .
T Consensus 349 SIV~LA~~~~~~~~~~~~~~-~~~fvpFtA~TRmSGvd~--~~-~--~~irKGA~dai~~~v~~---~~g~-~------p 412 (681)
T COG2216 349 SIVELAKKLGIELREDDLQS-HAEFVPFTAQTRMSGVDL--PG-G--REIRKGAVDAIRRYVRE---RGGH-I------P 412 (681)
T ss_pred cHHHHHHHhccCCCcccccc-cceeeecceecccccccC--CC-C--ceeecccHHHHHHHHHh---cCCC-C------C
Confidence 89999999886544332221 346789999988777643 22 2 56789999999876542 2221 1 2
Q ss_pred HHHHHHHHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHH
Q 001638 608 KNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTA 687 (1039)
Q Consensus 608 ~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta 687 (1039)
+.+....++-++.|=..++++ .|-.++|++.++|-++||.+|-+.+||+.||+.+|+||||+.||
T Consensus 413 ~~l~~~~~~vs~~GGTPL~V~---------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TA 477 (681)
T COG2216 413 EDLDAAVDEVSRLGGTPLVVV---------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTA 477 (681)
T ss_pred HHHHHHHHHHHhcCCCceEEE---------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHH
Confidence 456777888899999999988 56789999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCC
Q 001638 688 KAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEAD 767 (1039)
Q Consensus 688 ~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~Ad 767 (1039)
.+||++.|+++ ..|.++|+||.++++.-|.. |+.|+|||||+||+|||.+||
T Consensus 478 a~IA~EAGVDd---------------------------fiAeatPEdK~~~I~~eQ~~-grlVAMtGDGTNDAPALAqAd 529 (681)
T COG2216 478 AAIAAEAGVDD---------------------------FIAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQAD 529 (681)
T ss_pred HHHHHHhCchh---------------------------hhhcCChHHHHHHHHHHHhc-CcEEEEcCCCCCcchhhhhcc
Confidence 99999999987 88999999999999999999 999999999999999999999
Q ss_pred cceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHH--------Hc
Q 001638 768 IGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTV----NIVALVINFVAAC--------IT 835 (1039)
Q Consensus 768 VGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~----Ni~~i~~~~~~~~--------~~ 835 (1039)
||+||. +||.+|||++.+|=+|.|...+.++++.|++..-.=-....|.+.- -++.++..|.... ..
T Consensus 530 Vg~AMN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLiTRGaLTTFSIANDvAKYFaIiPA~F~~~~P~l~~lNiM~ 608 (681)
T COG2216 530 VGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLITRGALTTFSIANDVAKYFAIIPAMFAAAYPQLGALNIMH 608 (681)
T ss_pred hhhhhc-cccHHHHHhhcccccCCCccceehHhhhhhhheeecccceeeehhhHHHHHHHHHHHHHHhhcccccceeecc
Confidence 999999 9999999999999999999999999999998764322333333332 2233333333322 11
Q ss_pred CCCchHHHH-HHHHH-HHhhHHHHhHhc
Q 001638 836 GSAPLTAVQ-LLWVN-MIMDTLGALALA 861 (1039)
Q Consensus 836 ~~~pl~~~q-ll~vn-li~d~l~alala 861 (1039)
..+|-+++- -+.+| +|.-.|..|||-
T Consensus 609 L~sP~SAilSAlIfNAlIIv~LIPLAlk 636 (681)
T COG2216 609 LHSPQSAILSALIFNALIIVALIPLALK 636 (681)
T ss_pred cCCcHHHHHHHHHHHHHHHHHhHHHHhc
Confidence 357777764 23444 344444555553
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-33 Score=302.11 Aligned_cols=225 Identities=36% Similarity=0.570 Sum_probs=188.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCceeEe
Q 001638 203 IVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTID 282 (1039)
Q Consensus 203 i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VD 282 (1039)
+++.+++..++..+.+++.++..+++.+...+..++|+|||++++++++||+|||+|.|++||++||||++++...+.||
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~vd 81 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAYVD 81 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccccccc
Confidence 34455666677778888888888888776555559999999999999999999999999999999999999994456999
Q ss_pred ccCCCCCCCccccCC----CCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCCCchHHHHhHHHHHHHHHH
Q 001638 283 ESSLSGETEPVHINR----DRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIG 358 (1039)
Q Consensus 283 ES~LTGEs~pv~k~~----~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a~~i~~i~ 358 (1039)
||.+|||+.|+.|.. .++++|+||.+.+|++.++|++||.+|..|++.+...+...+++++++.+++++.++.++.
T Consensus 82 ~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (230)
T PF00122_consen 82 ESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIII 161 (230)
T ss_dssp CHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcc
Confidence 999999999999981 4677999999999999999999999999999999998888888999999999999998887
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccccccccc
Q 001638 359 LVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHL 438 (1039)
Q Consensus 359 l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ilvr~~ 438 (1039)
+++++++++++... . ....+...+..++++++++||++||+++++++.+++++|.++|+++|++
T Consensus 162 ~~~~~~~~~~~~~~--------~--------~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~ 225 (230)
T PF00122_consen 162 LAIAILVFIIWFFN--------D--------SGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNL 225 (230)
T ss_dssp HHHHHHHHHHCHTG--------S--------TTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESST
T ss_pred cccchhhhccceec--------c--------cccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCc
Confidence 77776655433211 0 1123346778889999999999999999999999999999999999999
Q ss_pred hhhhc
Q 001638 439 SACET 443 (1039)
Q Consensus 439 ~a~E~ 443 (1039)
+++|+
T Consensus 226 ~a~E~ 230 (230)
T PF00122_consen 226 SALEA 230 (230)
T ss_dssp THHHH
T ss_pred ccccC
Confidence 99995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.6e-25 Score=227.26 Aligned_cols=176 Identities=31% Similarity=0.498 Sum_probs=142.1
Q ss_pred CCchHHHHHHHHHHHhhHHHHhHhccCCCCccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccccccCC
Q 001638 837 SAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIVLGVLTFCGKKILKLSG 916 (1039)
Q Consensus 837 ~~pl~~~qll~vnli~d~l~alala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~i~q~~v~~~l~~~~~~~~~~~~ 916 (1039)
|.|++++|+||+|+++|++|+++++.|||++++|+|||++++++++++.+|+.++.++++++++.+..++.+...++.+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 57999999999999999999999999999999999999999999999999999999999999888877776655444321
Q ss_pred C---CccchhhHHHHHHHHHHHHHHHHHhccccc-cccccccchhHHHHHHHHHHHHHHHHHHh--hhhhhhcccCCChH
Q 001638 917 P---NATLILNTFIFNSFVFCQVFNEINSRDMEK-INVFRGIFSSWVFIAVLVATVGFQVIIVE--LLGTFATTVPLNWK 990 (1039)
Q Consensus 917 ~---~~~~~~~T~~f~~~v~~qv~n~~~~r~~~~-~~~f~~~~~n~~f~~~~~~~~~~q~~~v~--~~~~~~~~~~l~~~ 990 (1039)
. ......+|+.|++++++|++|.+++|+.++ ...|+++++|+.+++++++++++|+++++ +++.+|++.++++.
T Consensus 81 ~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l~~~ 160 (182)
T PF00689_consen 81 ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPLPLW 160 (182)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----THH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCCCHH
Confidence 1 012358999999999999999999999642 22335888999999999999999988765 48999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh
Q 001638 991 LWLASVVIGAISMPFGVLLKCI 1012 (1039)
Q Consensus 991 ~w~~~i~~~~~~~~~~~~~k~i 1012 (1039)
+|+++++++++.++++++.|++
T Consensus 161 ~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 161 QWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HHHCHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999999999999975
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.2e-23 Score=217.18 Aligned_cols=97 Identities=43% Similarity=0.689 Sum_probs=91.2
Q ss_pred CcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccc
Q 001638 645 NYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKL 724 (1039)
Q Consensus 645 ~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~ 724 (1039)
+..++|.+.+.|++||+++++++.|+++|++++|+|||+..++.++|+++||.. .
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------~ 169 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------S 169 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS-------------------------E
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc-------------------------c
Confidence 789999999999999999999999999999999999999999999999999943 2
Q ss_pred eEEEec--ChhhH--HHHHHHHhhcCCCEEEEEcCCccCHHHhhhCC
Q 001638 725 QVMARS--SPTDK--YILVTQLRNVFKEVVAVTGNGTNDAPALHEAD 767 (1039)
Q Consensus 725 ~v~ar~--sP~~K--~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~Ad 767 (1039)
.|++++ +|++| .++++.|+.. ++.|+|+|||.||++|+++||
T Consensus 170 ~v~a~~~~kP~~k~~~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 170 IVFARVIGKPEPKIFLRIIKELQVK-PGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp EEEESHETTTHHHHHHHHHHHHTCT-GGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccccccchhHHHHHHHHhcC-CCEEEEEccCHHHHHHHHhCc
Confidence 399999 99999 9999999966 568999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.3e-19 Score=198.25 Aligned_cols=290 Identities=13% Similarity=0.191 Sum_probs=220.7
Q ss_pred CcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCC---------------CC-------
Q 001638 580 GASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGN---------------HK------- 637 (1039)
Q Consensus 580 Ga~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~---------------~~------- 637 (1039)
|-...+...|+++||+. ...|++...|++.++...+-...| .|+++|||+..-. ++
T Consensus 698 g~ad~~~eACTdfWdGa-di~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWDGA-DIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcCCc-eeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 55678899999999854 578999999999999998887777 5899999975211 00
Q ss_pred --------------------cC-----------CCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHH
Q 001638 638 --------------------AE-----------SIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHT 686 (1039)
Q Consensus 638 --------------------~~-----------~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~t 686 (1039)
++ ...-.+.+|.|++....+.|++....|+.|.++-|+.+.+|-+++..
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 00 01135778999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCceeeCcccc---------------------------------------------------cCCH-
Q 001638 687 AKAIAKECGILTDGGLAIEGTDFR---------------------------------------------------SKNP- 714 (1039)
Q Consensus 687 a~~iA~~~GI~~~~~~vi~G~~~~---------------------------------------------------~~~~- 714 (1039)
.+-.|.++||...++..++-.+-. .++.
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 999999999987543222211100 0000
Q ss_pred ------------------------HHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHH--HhhhCCc
Q 001638 715 ------------------------QEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAP--ALHEADI 768 (1039)
Q Consensus 715 ------------------------~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~--aL~~AdV 768 (1039)
++++++..-+..|..++|+.-.++++.+|++ |++++++|...|-.. .+-+|||
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~-GEVtcclGS~aN~rNSciflkadI 1014 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQEN-GEVTCCLGSCANARNSCIFLKADI 1014 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHc-CcEEEEeccccccccceEEEccce
Confidence 2233333334589999999999999999999 999999999998544 5688999
Q ss_pred ceeecC------------CCcHH--HH----------------hccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHH
Q 001638 769 GLAMGI------------AGTEV--AK----------------ENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQL 818 (1039)
Q Consensus 769 GIamgi------------~gt~~--ak----------------~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l 818 (1039)
+||+.. -++.. |. -+.|+.+-+...-+|.++|+.+|.....+|+.+.|.+
T Consensus 1015 SialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiL 1094 (1354)
T KOG4383|consen 1015 SIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFIL 1094 (1354)
T ss_pred eEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 999731 01111 11 1245555555667888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHhhHHHHhH-hccCCCCccccCC
Q 001638 819 TVNIVALVINFVAACITGSAPLTAVQLLWVNMIMDTLGALA-LATEPPHEGLMQR 872 (1039)
Q Consensus 819 ~~Ni~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~ala-la~e~p~~~lm~~ 872 (1039)
...+...++.|++.++..+..++..|++|...+--++..+. |-+.+|...+|-+
T Consensus 1095 q~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~hkSii~m 1149 (1354)
T KOG4383|consen 1095 QAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEHKSIIIM 1149 (1354)
T ss_pred HHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHHHHhcCCCccceEEe
Confidence 99999999999999999999999999999998865554444 4455666655544
|
|
| >PF12515 CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory domain; InterPro: IPR024750 This entry represents the N-terminal autoinhibitory calmodulin-binding domain characteristic of certain calcium-transporting ATPases [] | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.5e-15 Score=115.23 Aligned_cols=46 Identities=65% Similarity=0.998 Sum_probs=43.7
Q ss_pred cccCCccCCCCCCCHHHHHhhHHHhhhhcCccccchhhHHhhhHHH
Q 001638 4 YLKKNFDVDPKRPSEEALMRWRSAVRVVKNPRRRFRMVADLAKRAE 49 (1039)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 (1039)
|+.++|++++||+|+|+++|||+|+++|+||+|||||++||+|+++
T Consensus 1 yl~~~Fdi~~Kn~s~e~l~rWR~a~~lv~N~~RRFR~~~dL~k~~e 46 (47)
T PF12515_consen 1 YLDDNFDIPAKNSSEEALRRWRQAVGLVKNARRRFRYTADLKKREE 46 (47)
T ss_pred CCccccCCCCCCCCHHHHHHHHHHhHHhccccceeeecccHhhHhc
Confidence 5789999999999999999999999999999999999999998874
|
This domain binds calmodulin in a calcium-dependent fashion and has a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important.; GO: 0005516 calmodulin binding |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.2e-14 Score=132.61 Aligned_cols=72 Identities=44% Similarity=0.721 Sum_probs=64.0
Q ss_pred cccCCchHHHHHHHHHHhC--CCcccccccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhh
Q 001638 519 NILGTPTERAILEFGLILG--GDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKI 592 (1039)
Q Consensus 519 ~~~g~p~e~All~~a~~~g--~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~ 592 (1039)
...|+|+|.||+.|+..+| .+....+..+++++++||||+||||+++++ .+ +.+.+|+|||||.||++|+++
T Consensus 18 ~~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~-~~~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 18 EIIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-ND-GKYILYVKGAPEVILDRCTHI 91 (91)
T ss_pred cccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CC-CEEEEEcCCChHHHHHhcCCC
Confidence 4899999999999999994 567788899999999999999999999998 33 457779999999999999863
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.7e-13 Score=125.71 Aligned_cols=126 Identities=24% Similarity=0.355 Sum_probs=107.3
Q ss_pred cEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccce
Q 001638 646 YTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQ 725 (1039)
Q Consensus 646 l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~ 725 (1039)
....+.++---.+=++++++|++|++. ++|.+.|||...+....|+-.||..+ +
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------r 72 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------R 72 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee-------------------------e
Confidence 345666777777889999999999999 99999999999999999999999763 3
Q ss_pred EEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceee-cC-CCcHHHHhccCEEeecCCchHHHHHH
Q 001638 726 VMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAM-GI-AGTEVAKENADVIIMDDNFTTIVTVA 800 (1039)
Q Consensus 726 v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIam-gi-~gt~~ak~~aDivl~dd~f~~i~~~i 800 (1039)
||+...|+.|.++++.|++. ++.|.|+|||.||.+||++||+||.. +. ...+-+.++||+++-+ ...++++.
T Consensus 73 v~a~a~~e~K~~ii~eLkk~-~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl~ 146 (152)
T COG4087 73 VFAGADPEMKAKIIRELKKR-YEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDLL 146 (152)
T ss_pred eecccCHHHHHHHHHHhcCC-CcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHHh
Confidence 99999999999999999988 89999999999999999999999875 31 3344577999999975 55555543
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.9e-11 Score=103.65 Aligned_cols=67 Identities=30% Similarity=0.523 Sum_probs=64.1
Q ss_pred hCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHH
Q 001638 117 RGGVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVS 183 (1039)
Q Consensus 117 ~~gv~~~~~~l~t~~~~GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls 183 (1039)
..+++++++.|+|+...||+.+|+++|+++||+|+++.++++++|+.++++|.++++++|++++++|
T Consensus 3 ~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 3 QLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp TSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 3578999999999999999999999999999999999999999999999999999999999999986
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.5e-10 Score=97.10 Aligned_cols=62 Identities=29% Similarity=0.402 Sum_probs=58.3
Q ss_pred HhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhcc
Q 001638 126 EVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVG 187 (1039)
Q Consensus 126 ~l~t~~~~GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~ 187 (1039)
.|+++...||+.+|+++|+++||.|+++.++++++|..++++|.++++++|++++++|++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 46788888999999999999999999999988999999999999999999999999999765
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.4e-09 Score=118.61 Aligned_cols=67 Identities=24% Similarity=0.264 Sum_probs=57.2
Q ss_pred hHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHH
Q 001638 734 DKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 734 ~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~ 801 (1039)
.|..-++.+.+.+| +.|+++|||.||.+||+.|++|+||| ++.+.+|+.||+|..+++-.++..+++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHH
Confidence 56666666655544 45888899999999999999999999 999999999999998888888888875
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.97 E-value=6.1e-09 Score=114.97 Aligned_cols=144 Identities=25% Similarity=0.347 Sum_probs=106.2
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCC-----CCceeeC-ccc----------------------
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTD-----GGLAIEG-TDF---------------------- 709 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~-----~~~vi~G-~~~---------------------- 709 (1039)
+.+.++++++++++.|+++.++||++...++.+.+++|+... +..+... +.+
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~ 100 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQG 100 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccC
Confidence 899999999999999999999999999999999999999751 1000000 000
Q ss_pred -------------------------------------c----------cCCH---HHHH----hhcc-cceEEEecCh--
Q 001638 710 -------------------------------------R----------SKNP---QEMQ----ELIP-KLQVMARSSP-- 732 (1039)
Q Consensus 710 -------------------------------------~----------~~~~---~~~~----~~~~-~~~v~ar~sP-- 732 (1039)
. .... ++.. +... ....+.+..+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~ 180 (264)
T COG0561 101 IALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPIS 180 (264)
T ss_pred ceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCce
Confidence 0 0000 1111 1111 1223333333
Q ss_pred -------hhHHHHHHHHhhcCCC---EEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHH
Q 001638 733 -------TDKYILVTQLRNVFKE---VVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARW 802 (1039)
Q Consensus 733 -------~~K~~~V~~l~~~~g~---~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~ 802 (1039)
.+|...++.+.+..|- .|+++||+.||.+||+.|+.|+||| ++.+.+|+.||++...++-.+|..++++
T Consensus 181 lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 181 LDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred EEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 3799888888775453 4888899999999999999999999 9999999999988888899999998864
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.8e-09 Score=119.99 Aligned_cols=129 Identities=22% Similarity=0.317 Sum_probs=100.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCC--c-eeeCcccccCCHHHHHhhcccceEEE-ecCh
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGG--L-AIEGTDFRSKNPQEMQELIPKLQVMA-RSSP 732 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~--~-vi~G~~~~~~~~~~~~~~~~~~~v~a-r~sP 732 (1039)
++.||+.+.++.|+++|+++.++||.....+..+.+++|+..-.. . +.+|.--. .+.. -+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg--------------~v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTG--------------NVLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEe--------------EecCccCCc
Confidence 579999999999999999999999999888999999999854110 0 00110000 0000 0234
Q ss_pred hhHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHH
Q 001638 733 TDKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 733 ~~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~ 801 (1039)
+.|.+.++.+.++.| +.+.++|||.||.+|++.|++|||| ++.+..++.||+++...++..+..++-
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 678988888876544 5688889999999999999999999 789999999999999889998887653
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.93 E-value=5e-09 Score=110.57 Aligned_cols=128 Identities=15% Similarity=0.094 Sum_probs=94.5
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCC--ceeeC-cccccCCHHHHHhhcccceEEEecChh
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGG--LAIEG-TDFRSKNPQEMQELIPKLQVMARSSPT 733 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~--~vi~G-~~~~~~~~~~~~~~~~~~~v~ar~sP~ 733 (1039)
+++|++++.|+.+++.| ++.++||-....+..+++++|+..--. ..+++ ..+ ... .. ..+.
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~------------tG~-~~--~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRV------------VGY-QL--RQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCee------------ECe-ee--cCcc
Confidence 57999999999999986 999999999999999999999964211 11111 000 000 11 3577
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHh
Q 001638 734 DKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWG 803 (1039)
Q Consensus 734 ~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~g 803 (1039)
+|...++.+++. |..+.++|||.||.||++.||+|+++. +.+..+++||=.-.-.+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~-~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhh-CCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 899999999877 767888999999999999999999996 6666555554333334677777776543
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.92 E-value=7.6e-09 Score=110.59 Aligned_cols=142 Identities=25% Similarity=0.337 Sum_probs=100.6
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCC-----CCceeeCcc-c--ccCC---------------
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTD-----GGLAIEGTD-F--RSKN--------------- 713 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~-----~~~vi~G~~-~--~~~~--------------- 713 (1039)
.+.|++.++|++|++.|+++.++||++...++.+++.+++..+ +..+....+ . ....
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4889999999999999999999999999999999999998642 222222110 0 0000
Q ss_pred --------------------HHHHHhhccc--ceE-----EEe--cChhhHHHHHHHHhhcCC---CEEEEEcCCccCHH
Q 001638 714 --------------------PQEMQELIPK--LQV-----MAR--SSPTDKYILVTQLRNVFK---EVVAVTGNGTNDAP 761 (1039)
Q Consensus 714 --------------------~~~~~~~~~~--~~v-----~ar--~sP~~K~~~V~~l~~~~g---~~V~~~GDG~ND~~ 761 (1039)
.+++.+.+.+ ..+ +.. ....+|...++.+.+.+| +.++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0111111111 111 111 223588888888876544 35889999999999
Q ss_pred HhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHH
Q 001638 762 ALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTV 799 (1039)
Q Consensus 762 aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~ 799 (1039)
|++.|++|+||+ ++.+.+|+.||++..+++-.++.++
T Consensus 178 ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 999999999999 9999999999999987666666554
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=9.9e-09 Score=113.84 Aligned_cols=144 Identities=14% Similarity=0.146 Sum_probs=100.5
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCC-----CCcee--eCcccc--cCC--------------
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTD-----GGLAI--EGTDFR--SKN-------------- 713 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~-----~~~vi--~G~~~~--~~~-------------- 713 (1039)
.+.+.++++|++++++|+++.+.||++...++.+.+++|+... +..+. .|..+. .++
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 5889999999999999999999999999999999999998631 11111 010000 000
Q ss_pred -----------------------------------------------------HHHHH-------hhcc-cceE------
Q 001638 714 -----------------------------------------------------PQEMQ-------ELIP-KLQV------ 726 (1039)
Q Consensus 714 -----------------------------------------------------~~~~~-------~~~~-~~~v------ 726 (1039)
++++. +.+. ...+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 00000 0000 0111
Q ss_pred EEecCh--hhHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCE--EeecCCchHHHHH
Q 001638 727 MARSSP--TDKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADV--IIMDDNFTTIVTV 799 (1039)
Q Consensus 727 ~ar~sP--~~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDi--vl~dd~f~~i~~~ 799 (1039)
+...+| -.|..-++.+.+.+| +.|+++|||.||.+||+.|+.|+||| ++.+.+|+.||. +..+++-.++..+
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~ 257 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHY 257 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHH
Confidence 011222 257777777766544 45888899999999999999999999 999999999996 6667788888887
Q ss_pred HH
Q 001638 800 AR 801 (1039)
Q Consensus 800 i~ 801 (1039)
++
T Consensus 258 l~ 259 (272)
T PRK15126 258 LT 259 (272)
T ss_pred HH
Confidence 75
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=1e-08 Score=110.62 Aligned_cols=143 Identities=24% Similarity=0.291 Sum_probs=102.4
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCC-----CCceee---Cccccc--C---------------
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTD-----GGLAIE---GTDFRS--K--------------- 712 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~-----~~~vi~---G~~~~~--~--------------- 712 (1039)
+.|.+.++|+++++.|+++.++||++...+..+++++|+..+ +..+.. +..+.. +
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFP 100 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhcc
Confidence 788999999999999999999999999999999999998642 122221 111000 0
Q ss_pred ------------------------CHHHHHhhcc----cceE-----EEecChh--hHHHHHHHHhhcCC---CEEEEEc
Q 001638 713 ------------------------NPQEMQELIP----KLQV-----MARSSPT--DKYILVTQLRNVFK---EVVAVTG 754 (1039)
Q Consensus 713 ------------------------~~~~~~~~~~----~~~v-----~ar~sP~--~K~~~V~~l~~~~g---~~V~~~G 754 (1039)
..+++.+.+. ...+ +....|. .|..-++.+.+++| +.++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~G 180 (230)
T PRK01158 101 EASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIG 180 (230)
T ss_pred ccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEC
Confidence 0011111111 1111 1122232 47777777766544 4588889
Q ss_pred CCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHH
Q 001638 755 NGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 755 DG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~ 801 (1039)
|+.||.+|++.|++|+||| ++.+.+|+.||++..+++=.++..+++
T Consensus 181 D~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 181 DSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 9999999999999999999 999999999999998888888888775
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.6e-08 Score=111.80 Aligned_cols=67 Identities=21% Similarity=0.197 Sum_probs=55.5
Q ss_pred hHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccC--EEeecCCchHHHHHHH
Q 001638 734 DKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENAD--VIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 734 ~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aD--ivl~dd~f~~i~~~i~ 801 (1039)
+|..-++.+.+.+| +.|+++|||.||.+||+.|+.|+||| ++.+.+|+.|| .|+.+++=.++..+++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 46666666655444 45888899999999999999999999 99999999988 6777777888888775
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.85 E-value=9.9e-09 Score=109.93 Aligned_cols=128 Identities=21% Similarity=0.264 Sum_probs=95.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCcee--eCcccccCCHHHHHhhcccceEEEe-cChh
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAI--EGTDFRSKNPQEMQELIPKLQVMAR-SSPT 733 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi--~G~~~~~~~~~~~~~~~~~~~v~ar-~sP~ 733 (1039)
+++|++++.++.|+++|+++.++||.....+..+.+.+|+..-....+ .+..+. ..+.+. ..+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~ 151 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLT-------------GLVEGPIVDAS 151 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEE-------------EEecCcccCCc
Confidence 579999999999999999999999999999999999999965111000 000000 000111 1233
Q ss_pred hHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHH
Q 001638 734 DKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTV 799 (1039)
Q Consensus 734 ~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~ 799 (1039)
.|..+++.+.+..+ +.+.++||+.||.++++.|+++++++ +.+..+++||++|.+++|..+..+
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 47777776655423 34778899999999999999999885 678899999999999999888754
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.8e-08 Score=109.49 Aligned_cols=144 Identities=27% Similarity=0.333 Sum_probs=102.2
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCC-----CCce-e-eCccc-------------------
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTD-----GGLA-I-EGTDF------------------- 709 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~-----~~~v-i-~G~~~------------------- 709 (1039)
..+.|++.+++++++++|+++.+.||++...+..+..++++..+ +..+ . .|+.+
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 44779999999999999999999999999999999999998731 1111 0 00000
Q ss_pred --------------ccCC--------------------------------------H-------HHHHhhcccceEEEec
Q 001638 710 --------------RSKN--------------------------------------P-------QEMQELIPKLQVMARS 730 (1039)
Q Consensus 710 --------------~~~~--------------------------------------~-------~~~~~~~~~~~v~ar~ 730 (1039)
.... . +++.+..+....+.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 0000 0 1122222221122222
Q ss_pred ---------ChhhHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHH
Q 001638 731 ---------SPTDKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVT 798 (1039)
Q Consensus 731 ---------sP~~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~ 798 (1039)
...+|...++.+.+.+| +.++++||+.||.+||+.|+.|+||| ++++..|+.||++..+.+=.++.+
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHHH
Confidence 23589998888876544 56788899999999999999999999 999999999999998776688776
Q ss_pred HH
Q 001638 799 VA 800 (1039)
Q Consensus 799 ~i 800 (1039)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 54
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.7e-08 Score=106.90 Aligned_cols=144 Identities=24% Similarity=0.302 Sum_probs=100.6
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCC-----CCceeeCcc----c-ccCCH------------
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTD-----GGLAIEGTD----F-RSKNP------------ 714 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~-----~~~vi~G~~----~-~~~~~------------ 714 (1039)
.+.+.+++++++++++|+++.++||++...+..+++++|+... +..+..... + ..+.+
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 4778999999999999999999999999999999999996431 111211110 0 00000
Q ss_pred ------------------------HHHHhhccc----ceE-----EEecCh--hhHHHHHHHHhhcCC---CEEEEEcCC
Q 001638 715 ------------------------QEMQELIPK----LQV-----MARSSP--TDKYILVTQLRNVFK---EVVAVTGNG 756 (1039)
Q Consensus 715 ------------------------~~~~~~~~~----~~v-----~ar~sP--~~K~~~V~~l~~~~g---~~V~~~GDG 756 (1039)
++..+...+ ..+ +....| .+|...++.+.+++| +.++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 111111111 001 111222 378888888776544 468899999
Q ss_pred ccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchH----HHHHHH
Q 001638 757 TNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTT----IVTVAR 801 (1039)
Q Consensus 757 ~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~----i~~~i~ 801 (1039)
.||.+|++.|++|+||| ++.+.+|+.||+|..+++-.+ +..+++
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999 999999999999988777777 555553
|
catalyze the same reaction as SPP. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.80 E-value=4.7e-08 Score=117.61 Aligned_cols=67 Identities=28% Similarity=0.343 Sum_probs=55.0
Q ss_pred hHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHH
Q 001638 734 DKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 734 ~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~ 801 (1039)
+|..-++.+.+.+| +.|+++|||.||.+||+.|+.||||| ||.+.+|+.||+|..+++=.+|..+++
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 34444444444433 35788899999999999999999999 999999999999998888889988875
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.77 E-value=3.5e-08 Score=104.71 Aligned_cols=121 Identities=24% Similarity=0.242 Sum_probs=89.6
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEE-ecChhh
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMA-RSSPTD 734 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~a-r~sP~~ 734 (1039)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+...-...++-.+ ..++. .+.. .+..+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d-G~ltG----------~v~g~~~~~~~ 144 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD-GKLTG----------RVVGPICDGEG 144 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC-CEEec----------eeeeeecCcch
Confidence 67899999999999999999999999999999999999999863222221111 00000 1333 345578
Q ss_pred HHHHHHHHhhcCCC---EEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEee
Q 001638 735 KYILVTQLRNVFKE---VVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIM 789 (1039)
Q Consensus 735 K~~~V~~l~~~~g~---~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~ 789 (1039)
|...++.+.+..|. .+.++|||.||.|||+.|+.+++.+ +.+..+..|+..+.
T Consensus 145 K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~ 200 (212)
T COG0560 145 KAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIW 200 (212)
T ss_pred HHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcC
Confidence 99988777664343 4777799999999999999999885 55555666665554
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.71 E-value=5e-08 Score=99.53 Aligned_cols=101 Identities=16% Similarity=0.159 Sum_probs=80.4
Q ss_pred HHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEec--ChhhHHHHHHH
Q 001638 664 EAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARS--SPTDKYILVTQ 741 (1039)
Q Consensus 664 ~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~--sP~~K~~~V~~ 741 (1039)
.+|+.|+++|+++.++|+.+...+..+.+.+|+.. .|... .|+.-..+++.
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~---------------------------~f~~~kpkp~~~~~~~~~ 93 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR---------------------------FHEGIKKKTEPYAQMLEE 93 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------EEecCCCCHHHHHHHHHH
Confidence 58999999999999999999999999999999964 33222 23333333333
Q ss_pred HhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCc
Q 001638 742 LRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNF 793 (1039)
Q Consensus 742 l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f 793 (1039)
++-. .+.++++||+.||.+|++.|++++||+ ++.+..|+.|++|..+++=
T Consensus 94 l~~~-~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~ 143 (169)
T TIGR02726 94 MNIS-DAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGG 143 (169)
T ss_pred cCcC-HHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCC
Confidence 3322 356899999999999999999999999 9999999999999865443
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.6e-07 Score=104.03 Aligned_cols=67 Identities=28% Similarity=0.353 Sum_probs=56.2
Q ss_pred hHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHH
Q 001638 734 DKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 734 ~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~ 801 (1039)
+|...++.+.++.| +.++++||+.||.+|++.|++|+||| ++.+..|+.||++..+++-.++..+++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 46666665554434 45888899999999999999999999 899999999999999888888988875
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.68 E-value=9.5e-08 Score=96.50 Aligned_cols=98 Identities=20% Similarity=0.320 Sum_probs=80.4
Q ss_pred HHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHhh
Q 001638 665 AVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRN 744 (1039)
Q Consensus 665 aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~ 744 (1039)
+++.|+++|+++.++||++...+..+.+++|+.. .+... ..|...++.+.+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------~~~~~--~~k~~~~~~~~~ 86 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------LYQGQ--SNKLIAFSDILE 86 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE---------------------------EEecc--cchHHHHHHHHH
Confidence 9999999999999999999999999999999864 22221 345555555543
Q ss_pred cCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCC
Q 001638 745 VFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDN 792 (1039)
Q Consensus 745 ~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~ 792 (1039)
+.| +.++|+||+.||.+|++.|+++++|. ++.+..+..||+++..+.
T Consensus 87 ~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 87 KLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAG 136 (154)
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCC
Confidence 322 56899999999999999999999999 888899999999997554
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.59 E-value=3.7e-07 Score=100.35 Aligned_cols=142 Identities=27% Similarity=0.363 Sum_probs=98.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCC-----CCceee--Ccccc--cC---------------
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTD-----GGLAIE--GTDFR--SK--------------- 712 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~-----~~~vi~--G~~~~--~~--------------- 712 (1039)
++.+++.++|++++++|+++.++||++...+..+.+++|+..+ +..+.. |+.+. .+
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~~~~~ 95 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKKH 95 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHHHHHc
Confidence 5788999999999999999999999999999999999998631 111110 00000 00
Q ss_pred ------------------------------------------------------CH---HHHHhhcc------cceE---
Q 001638 713 ------------------------------------------------------NP---QEMQELIP------KLQV--- 726 (1039)
Q Consensus 713 ------------------------------------------------------~~---~~~~~~~~------~~~v--- 726 (1039)
.+ +++.+.+. .+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 175 (256)
T TIGR00099 96 GLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVSVVSS 175 (256)
T ss_pred CcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEEEEEe
Confidence 00 01111111 1111
Q ss_pred ---EEecCh--hhHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHH
Q 001638 727 ---MARSSP--TDKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVT 798 (1039)
Q Consensus 727 ---~ar~sP--~~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~ 798 (1039)
+-...| ..|..-++.+.+..| +.++++||+.||.+|++.|+.|+||| ++.+.+|+.||+++.+++-.++..
T Consensus 176 ~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~ 254 (256)
T TIGR00099 176 GPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVAL 254 (256)
T ss_pred cCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhh
Confidence 111222 257777777766533 46888999999999999999999999 999999999999998877777665
Q ss_pred H
Q 001638 799 V 799 (1039)
Q Consensus 799 ~ 799 (1039)
+
T Consensus 255 ~ 255 (256)
T TIGR00099 255 A 255 (256)
T ss_pred h
Confidence 4
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.55 E-value=6.4e-07 Score=98.46 Aligned_cols=143 Identities=17% Similarity=0.154 Sum_probs=95.8
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC-----CCCceeeCcc--------c--ccCCHHHHHhh--
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILT-----DGGLAIEGTD--------F--RSKNPQEMQEL-- 720 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~-----~~~~vi~G~~--------~--~~~~~~~~~~~-- 720 (1039)
..+.++++|++|+++|++++++||+....+..+.+++|+.. ++..+..... + ..+..+.+.++
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 44568999999999999999999999999999999999853 2223332111 0 00111100000
Q ss_pred ---------------------------------------------------------cc--cceEE-----EecC--hhh
Q 001638 721 ---------------------------------------------------------IP--KLQVM-----ARSS--PTD 734 (1039)
Q Consensus 721 ---------------------------------------------------------~~--~~~v~-----ar~s--P~~ 734 (1039)
+. .+.+. -... -..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 00 00000 0011 135
Q ss_pred HHHHHHHHhhcCC-----CEEEEEcCCccCHHHhhhCCcceeecCCCc---HHHHhc--c-CEEeecCCchHHHHHHH
Q 001638 735 KYILVTQLRNVFK-----EVVAVTGNGTNDAPALHEADIGLAMGIAGT---EVAKEN--A-DVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 735 K~~~V~~l~~~~g-----~~V~~~GDG~ND~~aL~~AdVGIamgi~gt---~~ak~~--a-Divl~dd~f~~i~~~i~ 801 (1039)
|...++.+.+.+| +.++++||+.||.+||+.|+.|+||| ++. +..|+. | ++|..+++-.++..+++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 6666666655433 45889999999999999999999999 887 467876 4 58877888888888775
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=2.9e-07 Score=95.72 Aligned_cols=108 Identities=19% Similarity=0.274 Sum_probs=85.5
Q ss_pred HHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHh
Q 001638 664 EAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLR 743 (1039)
Q Consensus 664 ~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~ 743 (1039)
.+++.|+++|+++.++||.+...+..+++++|+.. +|. ..++|...++.+.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~---------------------------~f~--g~~~k~~~l~~~~ 105 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH---------------------------LYQ--GQSNKLIAFSDLL 105 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------eec--CCCcHHHHHHHHH
Confidence 69999999999999999999999999999999864 332 2345666666654
Q ss_pred hcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecC----CchHHHHHHH
Q 001638 744 NVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDD----NFTTIVTVAR 801 (1039)
Q Consensus 744 ~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd----~f~~i~~~i~ 801 (1039)
+..| +.++|+||+.||.+|++.|+++++++ ++.+..+..||+++-.. .+..+.+.+.
T Consensus 106 ~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~ 169 (183)
T PRK09484 106 EKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLL 169 (183)
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHH
Confidence 4434 46899999999999999999999998 88888899999999532 2445555443
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.51 E-value=7.8e-07 Score=98.64 Aligned_cols=143 Identities=11% Similarity=0.073 Sum_probs=94.2
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC------CCCceeeCcc--------c-c-cCCHHHHHhhc
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILT------DGGLAIEGTD--------F-R-SKNPQEMQELI 721 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~------~~~~vi~G~~--------~-~-~~~~~~~~~~~ 721 (1039)
+-+.++++|++|+++|+++++.||+....+..+++++|+.. ++..+..... . . .++.+.+.+++
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 45779999999999999999999999999999999999852 2233332111 0 0 01111100000
Q ss_pred --------------------------------------cc--ceEEE----------------------------ecCh-
Q 001638 722 --------------------------------------PK--LQVMA----------------------------RSSP- 732 (1039)
Q Consensus 722 --------------------------------------~~--~~v~a----------------------------r~sP- 732 (1039)
.. ..+.. ...|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~~ 184 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLDA 184 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEecC
Confidence 00 00111 1122
Q ss_pred -hhHHHHHHHHhhcCC------CEEEEEcCCccCHHHhhhCCcceeecCCCc-HH-----HHhccCEEeecCCchHHHHH
Q 001638 733 -TDKYILVTQLRNVFK------EVVAVTGNGTNDAPALHEADIGLAMGIAGT-EV-----AKENADVIIMDDNFTTIVTV 799 (1039)
Q Consensus 733 -~~K~~~V~~l~~~~g------~~V~~~GDG~ND~~aL~~AdVGIamgi~gt-~~-----ak~~aDivl~dd~f~~i~~~ 799 (1039)
.+|..-++.+.+++| +.|+++|||.||.+||+.|++|+||| ++. +. .+..+|++.....-.++..+
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~-~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~ 263 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK-GLNREGVHLQDDDPARVYRTQREGPEGWREG 263 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec-CCCCCCcccccccCCceEeccCCCcHHHHHH
Confidence 356666666654323 46888899999999999999999999 444 32 34578998888777888887
Q ss_pred HH
Q 001638 800 AR 801 (1039)
Q Consensus 800 i~ 801 (1039)
++
T Consensus 264 l~ 265 (271)
T PRK03669 264 LD 265 (271)
T ss_pred HH
Confidence 75
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.1e-06 Score=93.03 Aligned_cols=124 Identities=19% Similarity=0.234 Sum_probs=90.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCC--ceeeCcccccCCHHHHHhhcccceEEE--ecCh
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGG--LAIEGTDFRSKNPQEMQELIPKLQVMA--RSSP 732 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~--~vi~G~~~~~~~~~~~~~~~~~~~v~a--r~sP 732 (1039)
++.||+++.++.|+++ +++.++|+.....+..+.+++|+..--. ....+... +.. -..|
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~----------------i~~~~~~~p 130 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGM----------------ITGYDLRQP 130 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCe----------------EECcccccc
Confidence 3589999999999999 9999999999999999999999863111 11110000 000 1246
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHH
Q 001638 733 TDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVA 800 (1039)
Q Consensus 733 ~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i 800 (1039)
..|...++.++.. ++.+.|+|||.||.+|.+.|++|+..+ .+.+.....++..+. +++..+...+
T Consensus 131 ~~k~~~l~~~~~~-~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~-~~~~el~~~l 195 (205)
T PRK13582 131 DGKRQAVKALKSL-GYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAV-HTYDELLAAI 195 (205)
T ss_pred chHHHHHHHHHHh-CCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCccccc-CCHHHHHHHH
Confidence 7888888988877 788999999999999999999999887 444444455666332 2466666554
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.3e-06 Score=91.89 Aligned_cols=118 Identities=19% Similarity=0.195 Sum_probs=82.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
+++|++.+.++.|+++|+++.++|+-....+..+++.+|+..--...+...+-.... +. .+....|..|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~--------p~--~~~~~~~~~k~ 149 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQ--------PD--GIVRVTFDNKG 149 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEe--------cc--eeeEEccccHH
Confidence 579999999999999999999999999999999999999754111111110000000 11 11123466787
Q ss_pred HHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccC
Q 001638 737 ILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENAD 785 (1039)
Q Consensus 737 ~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aD 785 (1039)
..++.+.+..| +.+.++||+.||.+|++.|+++++++ .+....+.++|
T Consensus 150 ~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 150 EAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred HHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 77777654423 45888999999999999999999997 44444555555
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.32 E-value=5e-06 Score=92.33 Aligned_cols=144 Identities=17% Similarity=0.157 Sum_probs=96.2
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCC-----CCceeeCcc----------------cc--cC
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTD-----GGLAIEGTD----------------FR--SK 712 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~-----~~~vi~G~~----------------~~--~~ 712 (1039)
..+.++++++|+.|++.|++++++||+....+..+++++|+..+ +..+..... +. .+
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPFQPDGERLKGDYWVIELGP 99 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccccCCccccccCCceEEEcCC
Confidence 35678899999999999999999999999999999999998642 223322110 00 00
Q ss_pred CHHHHHh-------------------------------------h----cccceEE-E----------------------
Q 001638 713 NPQEMQE-------------------------------------L----IPKLQVM-A---------------------- 728 (1039)
Q Consensus 713 ~~~~~~~-------------------------------------~----~~~~~v~-a---------------------- 728 (1039)
+.+.+.+ . +... ++ .
T Consensus 100 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~ 178 (273)
T PRK00192 100 PYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEP-FLWNGSEAAKERFEEALKRLGLKVTR 178 (273)
T ss_pred CHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCc-eeecCchHHHHHHHHHHHHcCCEEEE
Confidence 1100000 0 0000 11 0
Q ss_pred -----ecC-hhhHHHHHHHHhhcC---C-CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHH----hcc-CEEe--ecC
Q 001638 729 -----RSS-PTDKYILVTQLRNVF---K-EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAK----ENA-DVII--MDD 791 (1039)
Q Consensus 729 -----r~s-P~~K~~~V~~l~~~~---g-~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak----~~a-Divl--~dd 791 (1039)
... +..|...++.+.+.. . +.|+++||+.||.+|++.|++|+||+ ||.+.+| ..| +.+. ...
T Consensus 179 ~~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~ 257 (273)
T PRK00192 179 GGRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAP 257 (273)
T ss_pred CCeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCC
Confidence 011 115666666665432 3 77999999999999999999999999 9999999 666 6776 344
Q ss_pred CchHHHHHHH
Q 001638 792 NFTTIVTVAR 801 (1039)
Q Consensus 792 ~f~~i~~~i~ 801 (1039)
+=.++..+++
T Consensus 258 ~~~Gv~~~l~ 267 (273)
T PRK00192 258 GPEGWAEAIN 267 (273)
T ss_pred CcHHHHHHHH
Confidence 5667777764
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.29 E-value=0.00012 Score=87.02 Aligned_cols=99 Identities=19% Similarity=0.233 Sum_probs=75.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
|++|++.+.+++++++|+++.++|+-+...++.+++.+|+.+ .++.+++. .++.|+.|.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd---~Vigsd~~------------------~~~kg~~K~ 130 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD---GVFASDGT------------------TNLKGAAKA 130 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC---EEEeCCCc------------------cccCCchHH
Confidence 578999999999999999999999999999999999999832 33333221 135677777
Q ss_pred HHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHH
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEV 779 (1039)
Q Consensus 737 ~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ 779 (1039)
+.++..... ++ +.++||+.||.|+++.|+-.++++ .+...
T Consensus 131 ~~l~~~l~~-~~-~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~l 170 (479)
T PRK08238 131 AALVEAFGE-RG-FDYAGNSAADLPVWAAARRAIVVG-ASPGV 170 (479)
T ss_pred HHHHHHhCc-cC-eeEecCCHHHHHHHHhCCCeEEEC-CCHHH
Confidence 655533222 22 567799999999999999999998 44443
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.27 E-value=2.7e-06 Score=82.70 Aligned_cols=118 Identities=19% Similarity=0.293 Sum_probs=95.2
Q ss_pred HHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHh
Q 001638 664 EAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLR 743 (1039)
Q Consensus 664 ~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~ 743 (1039)
-.|+.+.++||++-++||++...++.=|+++||.. ++-. -.+|....+.|.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~---------------------------~~qG--~~dK~~a~~~L~ 92 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH---------------------------LYQG--ISDKLAAFEELL 92 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------eeec--hHhHHHHHHHHH
Confidence 47999999999999999999999999999999975 4433 457888887776
Q ss_pred hcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCC----chHHHHHHHHhHHHHHHHH
Q 001638 744 NVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDN----FTTIVTVARWGRSVYINIQ 811 (1039)
Q Consensus 744 ~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~----f~~i~~~i~~gR~~~~nI~ 811 (1039)
++.+ +.|+++||..||.|+|+..+.++|.. ++.+..++.||+|+.... +..+.++|..++.-++-..
T Consensus 93 ~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~~~ 166 (170)
T COG1778 93 KKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDEAL 166 (170)
T ss_pred HHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHHHH
Confidence 6533 56899999999999999999999998 888999999999987543 4455556665655555433
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.20 E-value=2.8e-06 Score=85.18 Aligned_cols=104 Identities=23% Similarity=0.365 Sum_probs=76.6
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCC--cee----eCcccccCCHHHHHhhcccceEEEecC
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGG--LAI----EGTDFRSKNPQEMQELIPKLQVMARSS 731 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~--~vi----~G~~~~~~~~~~~~~~~~~~~v~ar~s 731 (1039)
+-||+++.+..|++.|.+|.++||--..-+..+|.++||...+. ..+ +|+-.. . ++ --.-+.
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~g-f--d~---------~~ptsd 156 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLG-F--DT---------NEPTSD 156 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccc-c--cc---------CCcccc
Confidence 57999999999999999999999999999999999999976321 000 011000 0 00 001123
Q ss_pred hhhHHHHHHHHhhcC-CCEEEEEcCCccCHHHhhhCCcceeec
Q 001638 732 PTDKYILVTQLRNVF-KEVVAVTGNGTNDAPALHEADIGLAMG 773 (1039)
Q Consensus 732 P~~K~~~V~~l~~~~-g~~V~~~GDG~ND~~aL~~AdVGIamg 773 (1039)
...|.+.++.+++.. -..++|+|||.||.+|+..||-=|+.|
T Consensus 157 sggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 157 SGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred CCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 457999999988753 358999999999999999988777655
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.20 E-value=9.9e-06 Score=86.55 Aligned_cols=133 Identities=15% Similarity=0.113 Sum_probs=88.4
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCC---CCceeeCcccccCCHHHHHhhcccceEE---Ee
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTD---GGLAIEGTDFRSKNPQEMQELIPKLQVM---AR 729 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~---~~~vi~G~~~~~~~~~~~~~~~~~~~v~---ar 729 (1039)
-+++||+++.++.|++.|+++.++||.....+..+.+.++.... +....+|..+.... +.-..+ ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~--------p~~~~~~~~~~ 140 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDW--------PHPCDGTCQNQ 140 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeC--------CCCCccccccC
Confidence 46899999999999999999999999999999999988754321 11223333222110 000000 01
Q ss_pred cChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHh--ccCEEeecCCchHHHHHHH
Q 001638 730 SSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKE--NADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 730 ~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~--~aDivl~dd~f~~i~~~i~ 801 (1039)
| ...|..+++.++.. .+.+.|+|||.||.+|++.||+++|-+ .-.+-.++ .+.+.+ ++|..+...++
T Consensus 141 c-g~~K~~~l~~~~~~-~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 141 C-GCCKPSLIRKLSEP-NDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred C-CCCHHHHHHHHhhc-CCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 1 35799999998876 677889999999999999999988754 21121121 122222 46888777664
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.3e-05 Score=86.16 Aligned_cols=128 Identities=21% Similarity=0.292 Sum_probs=84.3
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEe------cC
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMAR------SS 731 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar------~s 731 (1039)
++|++++.++.|+++|+++.++||.....+..+++.+|+.... ++. ..+.. . .+-.+.+. +.
T Consensus 85 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~--~~~-~~~~~-~--------~~g~~~g~~~~~~~~~ 152 (224)
T PLN02954 85 LSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPEN--IFA-NQILF-G--------DSGEYAGFDENEPTSR 152 (224)
T ss_pred CCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhh--EEE-eEEEE-c--------CCCcEECccCCCcccC
Confidence 6899999999999999999999999999999999999996311 110 00000 0 00000000 11
Q ss_pred hhhHHHHHHHHhhcCC-CEEEEEcCCccCHHHhhh--CCcceeecCCC-cHHHHhccCEEeecCCchHHHHH
Q 001638 732 PTDKYILVTQLRNVFK-EVVAVTGNGTNDAPALHE--ADIGLAMGIAG-TEVAKENADVIIMDDNFTTIVTV 799 (1039)
Q Consensus 732 P~~K~~~V~~l~~~~g-~~V~~~GDG~ND~~aL~~--AdVGIamgi~g-t~~ak~~aDivl~dd~f~~i~~~ 799 (1039)
...|...++.+.+..| +.+.++||+.||..|.+. ++++++.|... .+.....+|+++. ++..+...
T Consensus 153 ~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~~ 222 (224)
T PLN02954 153 SGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIEV 222 (224)
T ss_pred CccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHHh
Confidence 2357777777765423 468889999999999877 56666665221 2334556899985 46666543
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.2e-05 Score=87.39 Aligned_cols=67 Identities=16% Similarity=0.188 Sum_probs=55.8
Q ss_pred hHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccC----EEeecCCchHHHHHHH
Q 001638 734 DKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENAD----VIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 734 ~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aD----ivl~dd~f~~i~~~i~ 801 (1039)
.|...++.+.+++| ..++++||+.||.+|++.|+.|++|+ ++.+..|+.|| ++...++=.++.++++
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 67787887766544 24778899999999999999999999 99999999999 7766666677888775
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.12 E-value=5.9e-06 Score=86.26 Aligned_cols=92 Identities=25% Similarity=0.278 Sum_probs=69.8
Q ss_pred ccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChh-h--HH
Q 001638 660 PGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPT-D--KY 736 (1039)
Q Consensus 660 ~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~-~--K~ 736 (1039)
|++.+.++.++++|++++++||+....++.+|+.+|+.... ++....+..- +....++.++. + |.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~~~~~~~~~----------~~~~~~~~~~~~~~~K~ 159 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VIGNELFDNG----------GGIFTGRITGSNCGGKA 159 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EEEEEEECTT----------CCEEEEEEEEEEESHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EEEEeeeecc----------cceeeeeECCCCCCcHH
Confidence 78889999999999999999999999999999999997522 1111111000 12245566655 4 99
Q ss_pred HHHHHH------hhcCCCEEEEEcCCccCHHHhh
Q 001638 737 ILVTQL------RNVFKEVVAVTGNGTNDAPALH 764 (1039)
Q Consensus 737 ~~V~~l------~~~~g~~V~~~GDG~ND~~aL~ 764 (1039)
..++.+ +.. ...+.++|||.||.||||
T Consensus 160 ~~l~~~~~~~~~~~~-~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 160 EALKELYIRDEEDID-PDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHTHT-CCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHhhcCCC-CCeEEEEECCHHHHHHhC
Confidence 999999 333 678999999999999986
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=2.9e-05 Score=83.42 Aligned_cols=128 Identities=23% Similarity=0.363 Sum_probs=88.7
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhH
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK 735 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 735 (1039)
.++.||+.+.++.|++.|+++.++||........+.+..|+...-..++.+.+... ..-.|+--
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~kp~~~~~ 155 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPN----------------KKPDPAPL 155 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCC----------------CCcChHHH
Confidence 35789999999999999999999999999999999999998653333333222110 01122222
Q ss_pred HHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCc-ceee--cCC-CcHHHHhccCEEeecCCchHHHHHHHH
Q 001638 736 YILVTQLRNVFKEVVAVTGNGTNDAPALHEADI-GLAM--GIA-GTEVAKENADVIIMDDNFTTIVTVARW 802 (1039)
Q Consensus 736 ~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdV-GIam--gi~-gt~~ak~~aDivl~dd~f~~i~~~i~~ 802 (1039)
..+++.++.. .+.+.++||+.||..+.+.|++ +|.+ |.. ..+.....+|+++ +++..+...+.+
T Consensus 156 ~~~~~~~~~~-~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 156 LLACEKLGLD-PEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred HHHHHHcCCC-hhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 3344444443 4568899999999999999998 4443 321 2344556788888 468888887654
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.03 E-value=3.7e-05 Score=84.18 Aligned_cols=146 Identities=15% Similarity=0.171 Sum_probs=96.8
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCC-------CceeeCc-ccccC--------------
Q 001638 655 KDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG-------GLAIEGT-DFRSK-------------- 712 (1039)
Q Consensus 655 ~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~-------~~vi~G~-~~~~~-------------- 712 (1039)
..+..|...++++++++.|+.++.+||+....++.+.+++++..+. ..+..+. .....
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 4567799999999999999999999999999999999999986542 1122111 00000
Q ss_pred ----------------------------CHHH----H---Hhhcc----cceE-EE-----ecCh--hhHHHHHHHHhhc
Q 001638 713 ----------------------------NPQE----M---QELIP----KLQV-MA-----RSSP--TDKYILVTQLRNV 745 (1039)
Q Consensus 713 ----------------------------~~~~----~---~~~~~----~~~v-~a-----r~sP--~~K~~~V~~l~~~ 745 (1039)
..+. + .+.+. ++.+ .+ ...| ..|...++.+.+.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 0000 1 11111 1111 11 1223 4788888888765
Q ss_pred CC---CEEEEEcCCccCHHHhhh-CCcceeecCCCcHHHHhccC-------EEeecCCchHHHHHHH
Q 001638 746 FK---EVVAVTGNGTNDAPALHE-ADIGLAMGIAGTEVAKENAD-------VIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 746 ~g---~~V~~~GDG~ND~~aL~~-AdVGIamgi~gt~~ak~~aD-------ivl~dd~f~~i~~~i~ 801 (1039)
+| +.|+++||+.||.+|++. ++.|++|+ ++.+..|+.++ ++-....-+++.++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 44 568888999999999998 67999999 99998886543 4433334566666654
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.7e-05 Score=83.72 Aligned_cols=107 Identities=17% Similarity=0.149 Sum_probs=77.0
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCC--ceeeCcccccCCHHHHHhhcccceEE-EecC
Q 001638 655 KDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGG--LAIEGTDFRSKNPQEMQELIPKLQVM-ARSS 731 (1039)
Q Consensus 655 ~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~--~vi~G~~~~~~~~~~~~~~~~~~~v~-ar~s 731 (1039)
..+++|++.+.++.+++.|+++.++||.....+..+++.+|+..--+ ........ .+ .+ +. -.+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~--~~--------g~--~~~~~~~ 152 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGI--YT--------GN--IDGNNCK 152 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCE--Ee--------CC--ccCCCCC
Confidence 34689999999999999999999999999999999999999964100 11100000 00 00 00 1234
Q ss_pred hhhHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcceeec
Q 001638 732 PTDKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMG 773 (1039)
Q Consensus 732 P~~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGIamg 773 (1039)
++.|...++.+.+..+ +.+.++||+.+|.||++.|+.++++.
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 6788888877654323 25788899999999999999999876
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.01 E-value=3.7e-05 Score=82.51 Aligned_cols=128 Identities=23% Similarity=0.357 Sum_probs=97.4
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhh
Q 001638 655 KDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTD 734 (1039)
Q Consensus 655 ~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 734 (1039)
...+-|+++++++.|+++|++..++|+++...+..+.+..|+...-..++.+.+... ..-.|..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~----------------~KP~P~~ 150 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPP----------------PKPDPEP 150 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCC----------------CCcCHHH
Confidence 346789999999999999999999999999999999999999875444444333221 1124555
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCC---cceeecCC-CcHHHHhccCEEeecCCchHHHHHHH
Q 001638 735 KYILVTQLRNVFKEVVAVTGNGTNDAPALHEAD---IGLAMGIA-GTEVAKENADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 735 K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~Ad---VGIamgi~-gt~~ak~~aDivl~dd~f~~i~~~i~ 801 (1039)
...+.+.+.-. .+.++||||..+|..|-++|+ ||+..|.+ +.+.....+|+++.+ +..+...+.
T Consensus 151 l~~~~~~~~~~-~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~--~~el~~~l~ 218 (220)
T COG0546 151 LLLLLEKLGLD-PEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDS--LAELLALLA 218 (220)
T ss_pred HHHHHHHhCCC-hhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECC--HHHHHHHHh
Confidence 55666666544 457999999999999999998 78888853 456677789999964 777766543
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.94 E-value=1.8e-05 Score=81.57 Aligned_cols=101 Identities=23% Similarity=0.219 Sum_probs=69.7
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHH
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYI 737 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~ 737 (1039)
++|++.+.++.+++.|+++.++||.....++.+++.+|+..--...+...+-.... .+...-..+.+..|..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~--------g~~~~~~~~~~~~K~~ 145 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLT--------GPIEGQVNPEGECKGK 145 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEe--------CccCCcccCCcchHHH
Confidence 58999999999999999999999999999999999999864111111000000000 0000001245678999
Q ss_pred HHHHHhhcCC---CEEEEEcCCccCHHHhhhC
Q 001638 738 LVTQLRNVFK---EVVAVTGNGTNDAPALHEA 766 (1039)
Q Consensus 738 ~V~~l~~~~g---~~V~~~GDG~ND~~aL~~A 766 (1039)
.++.+++..| +.+.++|||.||.+|++.|
T Consensus 146 ~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 146 VLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 9988765422 4588889999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.93 E-value=4.4e-05 Score=81.87 Aligned_cols=131 Identities=18% Similarity=0.164 Sum_probs=84.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCC----CceeeCcccccCCHHHHHhhcccceEE---Ee
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG----GLAIEGTDFRSKNPQEMQELIPKLQVM---AR 729 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~----~~vi~G~~~~~~~~~~~~~~~~~~~v~---ar 729 (1039)
+++||+.+.++.|++.|+++.++||-....+..+.+.+ +.... ....+|....... +..... .+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~k--------p~p~~~~~~~~ 144 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITW--------PHPCDEHCQNH 144 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEec--------cCCcccccccc
Confidence 57999999999999999999999999999999999988 64311 1112222211000 000000 00
Q ss_pred cChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHh--ccCEEeecCCchHHHHHHH
Q 001638 730 SSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKE--NADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 730 ~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~--~aDivl~dd~f~~i~~~i~ 801 (1039)
+ ...|...++.++.. +..+.++|||.||.+|.+.||+.++-+ .-.+.+++ .+.+.+ ++|..+...++
T Consensus 145 ~-~~~K~~~l~~~~~~-~~~~i~iGDs~~Di~aa~~Ag~~~a~~-~l~~~~~~~~~~~~~~--~~f~ei~~~l~ 213 (219)
T PRK09552 145 C-GCCKPSLIRKLSDT-NDFHIVIGDSITDLEAAKQADKVFARD-FLITKCEELGIPYTPF--ETFHDVQTELK 213 (219)
T ss_pred C-CCchHHHHHHhccC-CCCEEEEeCCHHHHHHHHHCCcceeHH-HHHHHHHHcCCCcccc--CCHHHHHHHHH
Confidence 1 13488888888776 566889999999999999999977632 11122222 233333 45777776653
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.92 E-value=4e-05 Score=79.66 Aligned_cols=115 Identities=13% Similarity=0.077 Sum_probs=77.4
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEe-cChhh
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMAR-SSPTD 734 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar-~sP~~ 734 (1039)
-+++|++.+.++.|++.|+++.++|+.+...+..+.+..|+...-..+++.+...+- ...+.-...++.++.. .....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~-~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDN-DGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECC-CCcEEEecCCCCccCcCCCCCC
Confidence 368999999999999999999999999999999999999986532233332221110 0000000011111111 11235
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCccee
Q 001638 735 KYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLA 771 (1039)
Q Consensus 735 K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIa 771 (1039)
|..+++.++++..+.+.++|||.||.+|.++||+-+|
T Consensus 150 K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 150 KGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred HHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 8889999876424568888999999999999988765
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.87 E-value=3.4e-05 Score=74.88 Aligned_cols=113 Identities=19% Similarity=0.149 Sum_probs=75.1
Q ss_pred cccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecCh
Q 001638 653 GIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSP 732 (1039)
Q Consensus 653 ~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP 732 (1039)
.-..++++++.+.++.|+++|++++++||.....+....+.+|+......++......................+.+-.|
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNP 99 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCH
Confidence 45568899999999999999999999999999999999999998543222222111110000000000111123334555
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhC
Q 001638 733 TDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEA 766 (1039)
Q Consensus 733 ~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~A 766 (1039)
+.+..+.+.+... .+.+.++||+.+|.+|++.+
T Consensus 100 ~~~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~ 132 (139)
T cd01427 100 DKLLAALKLLGVD-PEEVLMVGDSLNDIEMAKAA 132 (139)
T ss_pred HHHHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHc
Confidence 5666666666554 56788999999999999984
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.86 E-value=6.6e-05 Score=80.78 Aligned_cols=44 Identities=18% Similarity=0.173 Sum_probs=39.3
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC
Q 001638 655 KDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILT 698 (1039)
Q Consensus 655 ~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~ 698 (1039)
.+..-++++++|++|+++|++++++||+....+..+.+++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 34556789999999999999999999999999999999999853
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.79 E-value=9.2e-05 Score=78.42 Aligned_cols=125 Identities=18% Similarity=0.230 Sum_probs=84.5
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.||+.+.++.|+++|+++.++|+.+...+..+-+..|+...-..++...+.. ..+-.|+-=.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~----------------~~KP~~~~~~ 138 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVP----------------RPKPAPDIVR 138 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCC----------------CCCCChHHHH
Confidence 678999999999999999999999999999999999999864222222222110 0111222223
Q ss_pred HHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcce---eecC-CCcHHHHhccCEEeecCCchHHHHHH
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGL---AMGI-AGTEVAKENADVIIMDDNFTTIVTVA 800 (1039)
Q Consensus 737 ~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGI---amgi-~gt~~ak~~aDivl~dd~f~~i~~~i 800 (1039)
.+++.++-. .+.++|+||+.+|..+-++|++.. .-|. +..+..++.+|+++. ++..+..++
T Consensus 139 ~~~~~~~~~-~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~--~~~~l~~~~ 203 (205)
T TIGR01454 139 EALRLLDVP-PEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLR--KPQSLLALC 203 (205)
T ss_pred HHHHHcCCC-hhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeC--CHHHHHHHh
Confidence 333333323 466899999999999999999753 3341 223346778999884 466666554
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00022 Score=83.63 Aligned_cols=143 Identities=17% Similarity=0.131 Sum_probs=92.4
Q ss_pred CCccHHHHH-HHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCC-------CceeeCccccc------------------
Q 001638 658 VRPGVREAV-ETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG-------GLAIEGTDFRS------------------ 711 (1039)
Q Consensus 658 lR~~v~~aI-~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~-------~~vi~G~~~~~------------------ 711 (1039)
+.+...+++ +++++.|+.+++.||+....++.+.++.++..+. ..+..+.....
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~ 108 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVV 108 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHH
Confidence 343445555 8899999999999999999999999999987652 11111111100
Q ss_pred -----C--------------------CH-------HHHHhhcc----cceE------EEecCh--hhHHHHHHHHhhcC-
Q 001638 712 -----K--------------------NP-------QEMQELIP----KLQV------MARSSP--TDKYILVTQLRNVF- 746 (1039)
Q Consensus 712 -----~--------------------~~-------~~~~~~~~----~~~v------~ar~sP--~~K~~~V~~l~~~~- 746 (1039)
. .+ +++.+.+. .+.+ +-...| ..|...++.|.+++
T Consensus 109 ~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 109 EETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred HHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 0 00 01111111 1111 112333 35888888887764
Q ss_pred --C---CEEEEEcCCccCHHHhhhCC-cceeecCCCcHHHHhcc--------CEEeec-CCchHHHHHHH
Q 001638 747 --K---EVVAVTGNGTNDAPALHEAD-IGLAMGIAGTEVAKENA--------DVIIMD-DNFTTIVTVAR 801 (1039)
Q Consensus 747 --g---~~V~~~GDG~ND~~aL~~Ad-VGIamgi~gt~~ak~~a--------Divl~d-d~f~~i~~~i~ 801 (1039)
| +.++++||+.||.+||+.|+ .||+|| ++.+..|+.+ +++..+ .+-.+|..+++
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 2 46788899999999999999 699999 9999888743 555443 34556666654
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00033 Score=75.14 Aligned_cols=39 Identities=18% Similarity=0.181 Sum_probs=36.2
Q ss_pred CccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC
Q 001638 659 RPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGIL 697 (1039)
Q Consensus 659 R~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~ 697 (1039)
-+.++++++.++++|+++.++||++...++.+.+++|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 344899999999999999999999999999999999986
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00051 Score=75.88 Aligned_cols=137 Identities=13% Similarity=0.194 Sum_probs=86.5
Q ss_pred CCCccHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHcCCC--CCCC-cee--eCcc-cccCCH---------------
Q 001638 657 PVRPGVREAVETCLA-AGITVRMVTGDNIHTAKAIAKECGIL--TDGG-LAI--EGTD-FRSKNP--------------- 714 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~-aGi~v~m~TGD~~~ta~~iA~~~GI~--~~~~-~vi--~G~~-~~~~~~--------------- 714 (1039)
.+-++++++++.|++ .|++++++||++...+..+.+.+++. ..++ .+. .|.. ...+..
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 445899999999998 79999999999999999988877642 1111 111 0100 000110
Q ss_pred -------------------------HHHHh-------hcccceE-----EEecCh--hhHHHHHHHHhhcCC---CEEEE
Q 001638 715 -------------------------QEMQE-------LIPKLQV-----MARSSP--TDKYILVTQLRNVFK---EVVAV 752 (1039)
Q Consensus 715 -------------------------~~~~~-------~~~~~~v-----~ar~sP--~~K~~~V~~l~~~~g---~~V~~ 752 (1039)
+.+.+ ..+...+ +....| .+|...++.+.+..| ..+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 11111 1111111 112223 478888887766544 46888
Q ss_pred EcCCccCHHHhhhC----CcceeecCCCcHHHHhccCEEeecCCchHHHHHH
Q 001638 753 TGNGTNDAPALHEA----DIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVA 800 (1039)
Q Consensus 753 ~GDG~ND~~aL~~A----dVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i 800 (1039)
+||+.||.+|++.+ +.||+|| ++. ..|++.|.+ ...+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~~--~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLAG--VPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCCC--HHHHHHHH
Confidence 89999999999999 9999999 654 457887764 55555444
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00035 Score=77.48 Aligned_cols=126 Identities=17% Similarity=0.266 Sum_probs=82.0
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhH
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK 735 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 735 (1039)
.++.|++.++++.|+++|+++.++|+.+...+..+.+..|+....+.++.+.+... ..-.|+-=
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~----------------~Kp~p~~~ 163 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQ----------------KKPDPAAL 163 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCC----------------CCCCcHHH
Confidence 46799999999999999999999999999999999999998543222333222100 01111111
Q ss_pred HHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCc---ceeecCC-CcHHHHhccCEEeecCCchHHHHHH
Q 001638 736 YILVTQLRNVFKEVVAVTGNGTNDAPALHEADI---GLAMGIA-GTEVAKENADVIIMDDNFTTIVTVA 800 (1039)
Q Consensus 736 ~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdV---GIamgi~-gt~~ak~~aDivl~dd~f~~i~~~i 800 (1039)
..+.+.+.-. .+.+.++||+.||..+.+.|++ ++..|-. ..+..+..+|+++. ++..+..++
T Consensus 164 ~~~~~~~g~~-~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~ 229 (272)
T PRK13223 164 LFVMKMAGVP-PSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGC 229 (272)
T ss_pred HHHHHHhCCC-hhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHH
Confidence 2223333222 3568899999999999999997 3333322 22234567999884 476665543
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00043 Score=73.82 Aligned_cols=124 Identities=20% Similarity=0.213 Sum_probs=84.3
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHH
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYI 737 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~ 737 (1039)
+.||+.+.++.|+++|+++.++|+.....+..+-+..|+...-..++.+.+... ....|+--..
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~----------------~Kp~p~~~~~ 146 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEH----------------AKPDPEPVLK 146 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCC----------------CCCCcHHHHH
Confidence 689999999999999999999999999999999999999753233333222110 1122333333
Q ss_pred HHHHHhhcCCCEEEEEcCCccCHHHhhhCCc---ceeecCCCcH-HHHhccCEEeecCCchHHHHHH
Q 001638 738 LVTQLRNVFKEVVAVTGNGTNDAPALHEADI---GLAMGIAGTE-VAKENADVIIMDDNFTTIVTVA 800 (1039)
Q Consensus 738 ~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdV---GIamgi~gt~-~ak~~aDivl~dd~f~~i~~~i 800 (1039)
+.+.+.-. ...++++||+.+|..+-++|++ |+.-|....+ .....+|+++. ++..+..++
T Consensus 147 ~~~~~~~~-~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 147 ALELLGAK-PEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred HHHHcCCC-HHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 44444333 3568899999999999999997 4444422222 34456888875 577777654
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00049 Score=73.13 Aligned_cols=123 Identities=17% Similarity=0.235 Sum_probs=80.4
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.||+.+.++.|+++|+++.++|+.+...+..+.+..|+...-..++.+.+... .+-.|+-=.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~Kp~p~~~~ 148 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQ----------------RKPHPDPLL 148 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCC----------------CCCChHHHH
Confidence 4799999999999999999999999999999999999998653333333222110 011122112
Q ss_pred HHHHHHhhcCCCEEEEEcCCccCHHHhhhCCccee-e--cCCC-cHHHHhccCEEeecCCchHHHH
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLA-M--GIAG-TEVAKENADVIIMDDNFTTIVT 798 (1039)
Q Consensus 737 ~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIa-m--gi~g-t~~ak~~aDivl~dd~f~~i~~ 798 (1039)
...+.+.-. .+.++++||+.+|..+.++|++-.. + |-.. .+.....+|+++. ++..+..
T Consensus 149 ~~~~~~~~~-~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~--~~~~l~~ 211 (213)
T TIGR01449 149 LAAERLGVA-PQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD--SLNELPP 211 (213)
T ss_pred HHHHHcCCC-hhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC--CHHHHHh
Confidence 223333222 3568899999999999999997543 2 3111 1233456888875 3665543
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.001 Score=72.94 Aligned_cols=43 Identities=7% Similarity=0.008 Sum_probs=39.1
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILT 698 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~ 698 (1039)
+..-+.++++|++|+++||.|++.||........+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3456779999999999999999999999999999999999864
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00068 Score=73.23 Aligned_cols=127 Identities=17% Similarity=0.185 Sum_probs=86.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.||+.+.++.|++.|+++.++|+.+...+..+-+..|+...-..++.+.+.. ...-.|+-=.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~----------------~~KP~p~~~~ 158 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLA----------------ERKPHPLPLL 158 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCC----------------CCCCCHHHHH
Confidence 468999999999999999999999999999888889899865333333333211 0112333333
Q ss_pred HHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcce---eecCC-Cc-HHHHhccCEEeecCCchHHHHHHHH
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGL---AMGIA-GT-EVAKENADVIIMDDNFTTIVTVARW 802 (1039)
Q Consensus 737 ~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGI---amgi~-gt-~~ak~~aDivl~dd~f~~i~~~i~~ 802 (1039)
.+++.+.-. .+.+.|+||+.||..+-+.|++.. .-|.. .. +.....+|+++. ++..+.+.+.|
T Consensus 159 ~~~~~l~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~~~~ 226 (229)
T PRK13226 159 VAAERIGVA-PTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE--QPQLLWNPATW 226 (229)
T ss_pred HHHHHhCCC-hhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC--CHHHHHHHhcC
Confidence 444444433 466899999999999999998753 23321 11 223456899885 47777766554
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0018 Score=71.01 Aligned_cols=138 Identities=12% Similarity=0.167 Sum_probs=83.3
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCc-ccccCCHHHHHhhcccceEEEecChhh
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGT-DFRSKNPQEMQELIPKLQVMARSSPTD 734 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~-~~~~~~~~~~~~~~~~~~v~ar~sP~~ 734 (1039)
-++|||+.+.++.|+++|+++.++||-....+..+.+++|+..+...++.-. .+.. +..+.- .+.-.+ ....
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~--dGvltG-~~~P~i----~~~~ 192 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDE--DGVLKG-FKGPLI----HTFN 192 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECC--CCeEeC-CCCCcc----cccc
Confidence 4579999999999999999999999999999999999999864332221100 0000 000000 000001 1134
Q ss_pred HHHHHHH-HhhcC-----CCEEEEEcCCccCHHHhhhC---CcceeecC-CC-----cHHHHhccCEEeecCCchHHHHH
Q 001638 735 KYILVTQ-LRNVF-----KEVVAVTGNGTNDAPALHEA---DIGLAMGI-AG-----TEVAKENADVIIMDDNFTTIVTV 799 (1039)
Q Consensus 735 K~~~V~~-l~~~~-----g~~V~~~GDG~ND~~aL~~A---dVGIamgi-~g-----t~~ak~~aDivl~dd~f~~i~~~ 799 (1039)
|.+.+.. ..+.+ ...+.++|||.||++|..-. .--+..|- +. .+.-+++-||||.+|.=-.++..
T Consensus 193 K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t~~v~~~ 272 (277)
T TIGR01544 193 KNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDETLEVANS 272 (277)
T ss_pred cHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCCchHHHH
Confidence 5554432 22211 25678889999999996543 11222231 11 12356788999999987777665
Q ss_pred H
Q 001638 800 A 800 (1039)
Q Consensus 800 i 800 (1039)
|
T Consensus 273 i 273 (277)
T TIGR01544 273 I 273 (277)
T ss_pred H
Confidence 4
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00063 Score=73.01 Aligned_cols=120 Identities=17% Similarity=0.229 Sum_probs=79.5
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.||+.++++.|++.|+++.++|+........+.++.||..--..++.+.+.. ..+-.|+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~Kp~~~--- 152 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLP----------------YSKPHPE--- 152 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCC----------------CCCCCHH---
Confidence 578999999999999999999999999999999999999876444444333211 0111222
Q ss_pred HHHHHHhhc--CCCEEEEEcCCccCHHHhhhCCcceee---cCCCcHHHHhccCEEeecCCchHHH
Q 001638 737 ILVTQLRNV--FKEVVAVTGNGTNDAPALHEADIGLAM---GIAGTEVAKENADVIIMDDNFTTIV 797 (1039)
Q Consensus 737 ~~V~~l~~~--~g~~V~~~GDG~ND~~aL~~AdVGIam---gi~gt~~ak~~aDivl~dd~f~~i~ 797 (1039)
-+...+++. ..+.++++||..||..+-++|++.... +..+.+.-...+|+++. +|..+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~--~~~dl~ 216 (222)
T PRK10826 153 VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE--SLTELT 216 (222)
T ss_pred HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc--CHHHHh
Confidence 222223322 025688999999999999999975433 21122222335787774 365554
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0009 Score=81.01 Aligned_cols=39 Identities=10% Similarity=0.120 Sum_probs=36.1
Q ss_pred CccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC
Q 001638 659 RPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGIL 697 (1039)
Q Consensus 659 R~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~ 697 (1039)
-+.++++|++++++|+.+++.||+....+..+++++|+.
T Consensus 435 ~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 435 YSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 356899999999999999999999999999999999974
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0013 Score=71.81 Aligned_cols=53 Identities=21% Similarity=0.259 Sum_probs=42.1
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcC----CccCHHHhhhC-CcceeecCCCcHHHHhccCEE
Q 001638 733 TDKYILVTQLRNVFKEVVAVTGN----GTNDAPALHEA-DIGLAMGIAGTEVAKENADVI 787 (1039)
Q Consensus 733 ~~K~~~V~~l~~~~g~~V~~~GD----G~ND~~aL~~A-dVGIamgi~gt~~ak~~aDiv 787 (1039)
-+|..-++.|.+. .+.|+++|| |.||.+||+.| -.|++++ ++.+..|..+.++
T Consensus 187 vsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~ 244 (247)
T PTZ00174 187 WDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELF 244 (247)
T ss_pred CcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHh
Confidence 3677777777766 567888899 99999999976 5778778 8888888776654
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0031 Score=69.88 Aligned_cols=122 Identities=14% Similarity=0.180 Sum_probs=81.9
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.||+.+.++.|+++|+++.++|+.+...+..+-+.+|+...-..++.+.+.. ..|+-=.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~~-------------------~k~~~~~ 202 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPIL-------------------SKRRALS 202 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCCC-------------------CCHHHHH
Confidence 468999999999999999999999999999999999999965333333332210 0121111
Q ss_pred HHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcce---eecCCCc-HHHHhccCEEeecCCchHHHHHH
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGL---AMGIAGT-EVAKENADVIIMDDNFTTIVTVA 800 (1039)
Q Consensus 737 ~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGI---amgi~gt-~~ak~~aDivl~dd~f~~i~~~i 800 (1039)
.+++.+.-. .+.++|+||+.+|..+-++|++-. .-|.... +.....+|+++. ++..+..++
T Consensus 203 ~~l~~~~~~-p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~--~~~eL~~~~ 267 (273)
T PRK13225 203 QLVAREGWQ-PAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE--TPSDLLQAV 267 (273)
T ss_pred HHHHHhCcC-hhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC--CHHHHHHHH
Confidence 222222222 356889999999999999999743 2331211 123456899884 577777654
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0022 Score=67.82 Aligned_cols=116 Identities=22% Similarity=0.344 Sum_probs=76.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCC--CCCCC-ceee-Cccc-cc--------------------
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGI--LTDGG-LAIE-GTDF-RS-------------------- 711 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI--~~~~~-~vi~-G~~~-~~-------------------- 711 (1039)
++.+++.+++++|++.|+++.++||+....+..+.++++. ...++ .+.. +... ..
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELK 96 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhhhhcCceee
Confidence 4779999999999999999999999999999999988542 11211 1111 1000 00
Q ss_pred -C-------------------------CH---HHH----Hhhc---ccceEEE------ecCh--hhHHHHHHHHhhcCC
Q 001638 712 -K-------------------------NP---QEM----QELI---PKLQVMA------RSSP--TDKYILVTQLRNVFK 747 (1039)
Q Consensus 712 -~-------------------------~~---~~~----~~~~---~~~~v~a------r~sP--~~K~~~V~~l~~~~g 747 (1039)
. .+ .++ .... ....+.. ...| .+|...++.+.++.+
T Consensus 97 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~ 176 (204)
T TIGR01484 97 SLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN 176 (204)
T ss_pred eeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC
Confidence 0 00 000 0000 1122221 1223 589998888876644
Q ss_pred ---CEEEEEcCCccCHHHhhhCCcceee
Q 001638 748 ---EVVAVTGNGTNDAPALHEADIGLAM 772 (1039)
Q Consensus 748 ---~~V~~~GDG~ND~~aL~~AdVGIam 772 (1039)
+.++++||+.||.+|++.|++|+||
T Consensus 177 ~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 177 GKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 4588999999999999999999998
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0026 Score=69.57 Aligned_cols=120 Identities=15% Similarity=0.114 Sum_probs=83.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+...-..++.+.+... ..-.|+-=.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~----------------~KP~p~~~~ 171 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEH----------------AKPHPDPYL 171 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCC----------------CCCChHHHH
Confidence 4689999999999999999999999999999999999999765455555554321 122333333
Q ss_pred HHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcc---eeecCCCcHHHHhccCEEeecCCchH
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG---LAMGIAGTEVAKENADVIIMDDNFTT 795 (1039)
Q Consensus 737 ~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVG---Iamgi~gt~~ak~~aDivl~dd~f~~ 795 (1039)
...+.+.-. .+.+.|+||..+|..+-++|++- +.-|....+.....+|+++.+ +..
T Consensus 172 ~a~~~~~~~-~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~--~~e 230 (248)
T PLN02770 172 KALEVLKVS-KDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD--YED 230 (248)
T ss_pred HHHHHhCCC-hhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc--chh
Confidence 344444433 45688999999999999999974 322311122234568888864 444
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.003 Score=67.25 Aligned_cols=107 Identities=13% Similarity=0.088 Sum_probs=74.9
Q ss_pred CCCccHHHHHH-HHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhH
Q 001638 657 PVRPGVREAVE-TCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK 735 (1039)
Q Consensus 657 ~lR~~v~~aI~-~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 735 (1039)
.++|++.+.++ .++++|++++++|+-....++.+|+..|+..... ++ |.+++.... .. ..-..|.-++|
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~-~i-~t~le~~~g-------g~-~~g~~c~g~~K 163 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN-LI-ASQIERGNG-------GW-VLPLRCLGHEK 163 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc-EE-EEEeEEeCC-------ce-EcCccCCChHH
Confidence 36999999995 7898999999999999999999999966643222 22 222221100 00 01124667889
Q ss_pred HHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeec
Q 001638 736 YILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMG 773 (1039)
Q Consensus 736 ~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamg 773 (1039)
...++..-....+...+=||+.||.|||+.||..++++
T Consensus 164 v~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 164 VAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred HHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 88777553211234446699999999999999999886
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0029 Score=67.74 Aligned_cols=126 Identities=22% Similarity=0.289 Sum_probs=82.4
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC--CCCCceeeCcccccCCHHHHHhhcccceEEEecChh
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGIL--TDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPT 733 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~--~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~ 733 (1039)
.++.||+.+.++.|++.|+++.++|+-....+..+.+.+|+. ..-..++.+.+... .+-.|+
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~----------------~KP~p~ 149 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAA----------------GRPAPD 149 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCC----------------CCCCHH
Confidence 368999999999999999999999999999999999999987 43334444433210 111222
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeec-CCCc----HHHHhccCEEeecCCchHHHHH
Q 001638 734 DKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMG-IAGT----EVAKENADVIIMDDNFTTIVTV 799 (1039)
Q Consensus 734 ~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamg-i~gt----~~ak~~aDivl~dd~f~~i~~~ 799 (1039)
-=....+.+.-...+.++|+||+.+|..+-+.|++..+++ ..|. +.....+|+++. ++..+..+
T Consensus 150 ~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~--~~~~l~~~ 218 (220)
T TIGR03351 150 LILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLD--SVADLPAL 218 (220)
T ss_pred HHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeec--CHHHHHHh
Confidence 2122222222110256899999999999999999986322 1222 122345787774 46665543
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.003 Score=69.27 Aligned_cols=96 Identities=19% Similarity=0.176 Sum_probs=66.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCC-CceeeCcccccCCHHHHHhhcccceEEEecChhhH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG-GLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK 735 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~-~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 735 (1039)
++.||+.+.++.|+++|+++.++|+.....+..+-+.+|+.... +.++.+.+... .+-.|+-=
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~----------------~KP~p~~~ 162 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPA----------------GRPAPWMA 162 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCC----------------CCCCHHHH
Confidence 36799999999999999999999999999999999999987532 33444333210 11122222
Q ss_pred HHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCc
Q 001638 736 YILVTQLRNVFKEVVAVTGNGTNDAPALHEADI 768 (1039)
Q Consensus 736 ~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdV 768 (1039)
....+.+.-...+.++|+||..+|..+-+.|++
T Consensus 163 ~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi 195 (253)
T TIGR01422 163 LKNAIELGVYDVAACVKVGDTVPDIEEGRNAGM 195 (253)
T ss_pred HHHHHHcCCCCchheEEECCcHHHHHHHHHCCC
Confidence 223333321002458899999999999999996
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0037 Score=68.86 Aligned_cols=122 Identities=16% Similarity=0.188 Sum_probs=82.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.||+.+.++.|+++|+++.++|+.....+..+-+.+|+...-..++.+.+... ..-.|+-=.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~----------------~KP~Pe~~~ 172 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYR----------------GKPDPEMFM 172 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCC----------------CCCCHHHHH
Confidence 4689999999999999999999999999999999999999765555665554321 111222222
Q ss_pred HHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcce-eecCCCcHHHHhccCEEeecCCchHHH
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGL-AMGIAGTEVAKENADVIIMDDNFTTIV 797 (1039)
Q Consensus 737 ~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGI-amgi~gt~~ak~~aDivl~dd~f~~i~ 797 (1039)
..++.+.-. .+.++|+||..+|..+-+.|++-. ++...+.......+|+++.+ +..+.
T Consensus 173 ~a~~~l~~~-p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~--~~el~ 231 (260)
T PLN03243 173 YAAERLGFI-PERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR--LDDLS 231 (260)
T ss_pred HHHHHhCCC-hHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC--HHHHH
Confidence 333333333 356888999999999999999732 22112222233357887653 55543
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0022 Score=67.51 Aligned_cols=94 Identities=16% Similarity=0.074 Sum_probs=68.8
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhh
Q 001638 655 KDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTD 734 (1039)
Q Consensus 655 ~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 734 (1039)
.+++.++++++++.|++.|+++.++||.....+..+-+.+|+...-..++.+.+. ..+-.|+-
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~-----------------~~KP~p~~ 166 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDC-----------------PPKPNPEP 166 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCC-----------------CCCcCHHH
Confidence 3456778899999999999999999999999999999999997643344443331 11334544
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCccCHHHhhhC
Q 001638 735 KYILVTQLRNVFKEVVAVTGNGTNDAPALHEA 766 (1039)
Q Consensus 735 K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~A 766 (1039)
-....+.+.-. .+.++|+||+.+|..+-++|
T Consensus 167 ~~~~~~~~~~~-~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 167 LILAAKALGVE-ACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHhCcC-cccEEEEeCCHHHHHHHHhC
Confidence 44555555444 45688999999999887654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0052 Score=65.47 Aligned_cols=106 Identities=13% Similarity=0.105 Sum_probs=74.8
Q ss_pred CCCccHHHHH-HHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhH
Q 001638 657 PVRPGVREAV-ETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK 735 (1039)
Q Consensus 657 ~lR~~v~~aI-~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 735 (1039)
+++|++.+.+ +.+++.|+++.++|+-....++.+++.+|+.... .++ |.+++.. ......-..|.-+.|
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-~~i-~t~l~~~--------~tg~~~g~~c~g~~K 164 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-NLI-ASQMQRR--------YGGWVLTLRCLGHEK 164 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-ceE-EEEEEEE--------EccEECCccCCChHH
Confidence 3589999999 6788999999999999999999999999963211 122 2222110 000001123667899
Q ss_pred HHHHHHH-hhcCCCEEEEEcCCccCHHHhhhCCcceeec
Q 001638 736 YILVTQL-RNVFKEVVAVTGNGTNDAPALHEADIGLAMG 773 (1039)
Q Consensus 736 ~~~V~~l-~~~~g~~V~~~GDG~ND~~aL~~AdVGIamg 773 (1039)
...++.. ... .....+=||+.||.|||+.|+-+++++
T Consensus 165 ~~~l~~~~~~~-~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 165 VAQLERKIGTP-LRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred HHHHHHHhCCC-cceEEEecCCcccHHHHHhCCCCEEEC
Confidence 8877765 322 344446699999999999999999886
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0054 Score=67.86 Aligned_cols=123 Identities=13% Similarity=0.142 Sum_probs=81.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCC-CceeeCcccccCCHHHHHhhcccceEEEecChhhH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG-GLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK 735 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~-~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 735 (1039)
++-||+.+.++.|++.|+++.++||.....+..+-+..|+..-. +.++.+.+.. ...|. .
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~------------------~~KP~-p 161 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVP------------------AGRPY-P 161 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCC------------------CCCCC-h
Confidence 46799999999999999999999999999988888887765421 2333332211 11221 1
Q ss_pred HHHHHHHhhcC---CCEEEEEcCCccCHHHhhhCCc---ceeecCCC------------------------cHHHHhccC
Q 001638 736 YILVTQLRNVF---KEVVAVTGNGTNDAPALHEADI---GLAMGIAG------------------------TEVAKENAD 785 (1039)
Q Consensus 736 ~~~V~~l~~~~---g~~V~~~GDG~ND~~aL~~AdV---GIamgi~g------------------------t~~ak~~aD 785 (1039)
.-+.+.+++.. .+.++|+||+.+|..+-+.|++ |+.-|... .+.....+|
T Consensus 162 ~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~ 241 (267)
T PRK13478 162 WMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAH 241 (267)
T ss_pred HHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCC
Confidence 22333333331 2468999999999999999996 55555210 123345688
Q ss_pred EEeecCCchHHHHHH
Q 001638 786 VIIMDDNFTTIVTVA 800 (1039)
Q Consensus 786 ivl~dd~f~~i~~~i 800 (1039)
+++. ++..+...+
T Consensus 242 ~vi~--~~~~l~~~l 254 (267)
T PRK13478 242 YVID--TIADLPAVI 254 (267)
T ss_pred eehh--hHHHHHHHH
Confidence 8885 477776655
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.014 Score=73.87 Aligned_cols=170 Identities=19% Similarity=0.262 Sum_probs=101.3
Q ss_pred HHHHHHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeecc--cCCCCccHHHHHHHHHH-CCCEEEEECCCCHHH
Q 001638 610 LTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGI--KDPVRPGVREAVETCLA-AGITVRMVTGDNIHT 686 (1039)
Q Consensus 610 ~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i--~D~lR~~v~~aI~~l~~-aGi~v~m~TGD~~~t 686 (1039)
++.....|.+...|.+++- -|.|++....- ...+.+++.+++++|.+ .|+.|+++||+....
T Consensus 480 ~~~~~~~y~~~~~rLi~~D---------------~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~ 544 (726)
T PRK14501 480 AEEIIARYRAASRRLLLLD---------------YDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDT 544 (726)
T ss_pred HHHHHHHHHhccceEEEEe---------------cCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHH
Confidence 3445555655556666654 34455543211 12367899999999999 699999999999999
Q ss_pred HHHHHHHcCC--CCCCCcee--eCcccccC---C--------------------------------------H-------
Q 001638 687 AKAIAKECGI--LTDGGLAI--EGTDFRSK---N--------------------------------------P------- 714 (1039)
Q Consensus 687 a~~iA~~~GI--~~~~~~vi--~G~~~~~~---~--------------------------------------~------- 714 (1039)
.+......++ ..+++..+ .|.+.... . +
T Consensus 545 l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a 624 (726)
T PRK14501 545 LERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARA 624 (726)
T ss_pred HHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHH
Confidence 9887665553 11211111 11111000 0 0
Q ss_pred HHHH----hhccc--ceEE-------EecChhhHHHHHHHHhhcC-CCEEEEEcCCccCHHHhhhC---CcceeecCCCc
Q 001638 715 QEMQ----ELIPK--LQVM-------ARSSPTDKYILVTQLRNVF-KEVVAVTGNGTNDAPALHEA---DIGLAMGIAGT 777 (1039)
Q Consensus 715 ~~~~----~~~~~--~~v~-------ar~sP~~K~~~V~~l~~~~-g~~V~~~GDG~ND~~aL~~A---dVGIamgi~gt 777 (1039)
+++. +.+.. +.+. .+..--+|...++.+.+.. ...|+++||+.||.+|++.+ ..+++|| ++
T Consensus 625 ~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~- 702 (726)
T PRK14501 625 NELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVG-PG- 702 (726)
T ss_pred HHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEEC-CC-
Confidence 0111 11111 1111 1122247888888877642 25799999999999999986 5889998 53
Q ss_pred HHHHhccCEEeecCCchHHHHHHH
Q 001638 778 EVAKENADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 778 ~~ak~~aDivl~dd~f~~i~~~i~ 801 (1039)
+.+|++.|.+ -..+..+++
T Consensus 703 ---~s~A~~~l~~--~~eV~~~L~ 721 (726)
T PRK14501 703 ---ESRARYRLPS--QREVRELLR 721 (726)
T ss_pred ---CCcceEeCCC--HHHHHHHHH
Confidence 5678898875 355555543
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.003 Score=69.07 Aligned_cols=46 Identities=26% Similarity=0.331 Sum_probs=36.0
Q ss_pred hhHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHH
Q 001638 733 TDKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEV 779 (1039)
Q Consensus 733 ~~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ 779 (1039)
..|...|+.|+++.+ +.|.+.||+.||.+||..++-||.+| ++.+.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHH
Confidence 478898988877643 34566799999999999999999999 77776
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0075 Score=72.17 Aligned_cols=123 Identities=12% Similarity=0.118 Sum_probs=83.9
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.||+.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+.+.. ....|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~-----------------~~~kP~--- 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQIN-----------------SLNKSD--- 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCC-----------------CCCCcH---
Confidence 578999999999999999999999999999999999999976434444444321 112232
Q ss_pred HHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcc-eeecC-CCcHHHHhccCEEeecCCchHHHHHHH
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG-LAMGI-AGTEVAKENADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 737 ~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVG-Iamgi-~gt~~ak~~aDivl~dd~f~~i~~~i~ 801 (1039)
-+...+++...+.+.++||+.+|..+-+.|++- |.+.- .+.+.....+|+++. ++..+..++.
T Consensus 390 ~~~~al~~l~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~ 454 (459)
T PRK06698 390 LVKSILNKYDIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGILS 454 (459)
T ss_pred HHHHHHHhcCcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHHH
Confidence 122223322135689999999999999999973 33320 222222345888875 4777766553
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0046 Score=66.77 Aligned_cols=87 Identities=20% Similarity=0.199 Sum_probs=63.3
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCC----CHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChh
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGD----NIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPT 733 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD----~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~ 733 (1039)
+.+++++.++.++++|+++.++|+. ...+++.+.+.+|+......++.|++... ..|
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~------------------~Kp- 175 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQ------------------YQY- 175 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCC------------------CCC-
Confidence 3455999999999999999999998 77899999999999753333443333210 112
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCc
Q 001638 734 DKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADI 768 (1039)
Q Consensus 734 ~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdV 768 (1039)
+|. ..+++. + .+.|+||..||..+-++|++
T Consensus 176 ~~~---~~l~~~-~-i~i~vGDs~~DI~aAk~AGi 205 (237)
T TIGR01672 176 TKT---QWIQDK-N-IRIHYGDSDNDITAAKEAGA 205 (237)
T ss_pred CHH---HHHHhC-C-CeEEEeCCHHHHHHHHHCCC
Confidence 233 234444 4 47899999999999999986
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0095 Score=63.76 Aligned_cols=115 Identities=15% Similarity=0.179 Sum_probs=73.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.||+.+.++.|+++|+++.++|+.....+...-+..|+.. ...++.+.+.. ...-.|+-=.
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~-~~~i~~~~~~~----------------~~KP~p~~~~ 145 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA-PEVFVTAERVK----------------RGKPEPDAYL 145 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC-ccEEEEHHHhc----------------CCCCCcHHHH
Confidence 468999999999999999999999998877777767778743 22333332211 0111222222
Q ss_pred HHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcc-eeecCCCc-HHHHhccCEEeec
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG-LAMGIAGT-EVAKENADVIIMD 790 (1039)
Q Consensus 737 ~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVG-Iamgi~gt-~~ak~~aDivl~d 790 (1039)
...+.+.-. .+.++|+||..+|..+-+.|++- |++. .+. ......+|+++.+
T Consensus 146 ~~~~~~g~~-p~~~l~igDs~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 146 LGAQLLGLA-PQECVVVEDAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHcCCC-cccEEEEecchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEecc
Confidence 333333333 46789999999999999999973 4443 222 2233457777653
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.012 Score=59.59 Aligned_cols=103 Identities=20% Similarity=0.293 Sum_probs=68.2
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHH---HHHHHc---C--CCCCCCceee-CcccccCCHHHHHhhcccce
Q 001638 655 KDPVRPGVREAVETCLAAGITVRMVTGDNIHTAK---AIAKEC---G--ILTDGGLAIE-GTDFRSKNPQEMQELIPKLQ 725 (1039)
Q Consensus 655 ~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~---~iA~~~---G--I~~~~~~vi~-G~~~~~~~~~~~~~~~~~~~ 725 (1039)
+|.+.|++++++++++++|+++.++||++...+. ....++ | +.. +..+.. |..+..... .
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~-g~li~~~g~~~~~~~~----------e 93 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH-GPVLLSPDRLFAALHR----------E 93 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC-ceEEEcCCcchhhhhc----------c
Confidence 5788999999999999999999999999998884 555552 3 321 122222 211111000 1
Q ss_pred EEEecChh-hHHHHHHHHhhcC----CCEEEEEcCCccCHHHhhhCCcc
Q 001638 726 VMARSSPT-DKYILVTQLRNVF----KEVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 726 v~ar~sP~-~K~~~V~~l~~~~----g~~V~~~GDG~ND~~aL~~AdVG 769 (1039)
+.. ..|+ .|...++.+++.+ ...++..|++.+|+.+-++++|-
T Consensus 94 ~i~-~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 94 VIS-KKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ccc-CCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 222 2343 4888888877632 46788889999999999877554
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.014 Score=60.03 Aligned_cols=107 Identities=14% Similarity=0.010 Sum_probs=63.6
Q ss_pred CCcEeeeeecccC----CCCccHHHHHHHHHHCCCEEEEECCCCHH--------HHHHHHHHcCCCCCCCceee----Cc
Q 001638 644 NNYTLIAVVGIKD----PVRPGVREAVETCLAAGITVRMVTGDNIH--------TAKAIAKECGILTDGGLAIE----GT 707 (1039)
Q Consensus 644 ~~l~~lG~v~i~D----~lR~~v~~aI~~l~~aGi~v~m~TGD~~~--------ta~~iA~~~GI~~~~~~vi~----G~ 707 (1039)
.|.|+.|-..+.+ ++-||++++++.|++.|+++.++|+.... .+....+..|+.. .... ++
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~---~~~~~~~~~~ 87 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDD---IYLCPHKHGD 87 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCE---EEECcCCCCC
Confidence 4555555544443 26899999999999999999999987641 2233344556533 1100 00
Q ss_pred ccccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcce
Q 001638 708 DFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGL 770 (1039)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGI 770 (1039)
+.. ..+-.|+-=...++.+.-. .+.+.|+||..+|..+-++|++-.
T Consensus 88 ~~~----------------~~KP~p~~~~~~~~~l~~~-p~~~i~IGD~~~Di~aA~~aGi~~ 133 (173)
T PRK06769 88 GCE----------------CRKPSTGMLLQAAEKHGLD-LTQCAVIGDRWTDIVAAAKVNATT 133 (173)
T ss_pred CCC----------------CCCCCHHHHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHCCCeE
Confidence 000 0111222223333333322 356899999999999999999743
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.018 Score=59.61 Aligned_cols=142 Identities=22% Similarity=0.284 Sum_probs=92.6
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCccccc--CCHHHHHhhcccc-----------
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRS--KNPQEMQELIPKL----------- 724 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~--~~~~~~~~~~~~~----------- 724 (1039)
+-||+.++++.+++. ....++|-.-.+-++++|..+|+...+ .--+--++++ ..+++..+++..+
T Consensus 84 lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~-~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 84 LVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGE-LHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred cCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccc-cccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 579999999999876 566777778889999999999996421 1111111111 1111111211111
Q ss_pred -----eEEEecChhh---------------HHHHHHHHhhcC--CCEEEEEcCCccCHHHhhhCC-c-ceeecCCCcHHH
Q 001638 725 -----QVMARSSPTD---------------KYILVTQLRNVF--KEVVAVTGNGTNDAPALHEAD-I-GLAMGIAGTEVA 780 (1039)
Q Consensus 725 -----~v~ar~sP~~---------------K~~~V~~l~~~~--g~~V~~~GDG~ND~~aL~~Ad-V-GIamgi~gt~~a 780 (1039)
.+|.|..|.+ |.++++.+-+.. ....+++||++.|..||+.+. - |+|+.-||.+-|
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYa 241 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYA 241 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCccc
Confidence 1455555554 444444443321 234688999999999999885 2 477777899999
Q ss_pred HhccCEEeecCCchHHHHHHH
Q 001638 781 KENADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 781 k~~aDivl~dd~f~~i~~~i~ 801 (1039)
...||+.+...+..+...+|.
T Consensus 242 l~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 242 LKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred ccccceEEeccchhhhhHHHH
Confidence 999999999888887777764
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.011 Score=62.02 Aligned_cols=94 Identities=13% Similarity=0.170 Sum_probs=66.4
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhh--
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTD-- 734 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~-- 734 (1039)
++.||+.++++.|+++|+++.++|+-+...+..+.+.+|+...-+.++...+.. ...|..
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~------------------~~KP~~~~ 153 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVR------------------AYKPAPQV 153 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcC------------------CCCCCHHH
Confidence 468999999999999999999999999999999999999864333333332211 122321
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcc
Q 001638 735 KYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 735 K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVG 769 (1039)
=..+.+.+.-. .+.++++||+.+|..+-++|++-
T Consensus 154 ~~~~~~~~~~~-p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 154 YQLALEALGVP-PDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred HHHHHHHhCCC-hhhEEEEeCCHHHHHHHHHCCCc
Confidence 12223333322 35688999999999999988764
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.019 Score=56.03 Aligned_cols=92 Identities=20% Similarity=0.170 Sum_probs=62.4
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCC--------HHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEE
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDN--------IHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVM 727 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~--------~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ 727 (1039)
-++.|++.++++.|+++|+++.++|+.. .....++.+.+|+... .....+ . .
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~-~------------------~ 83 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID-VLYACP-H------------------C 83 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE-EEEECC-C------------------C
Confidence 3678999999999999999999999998 7788889999988531 011111 0 0
Q ss_pred EecChhhHHHHHHHHh-hcCCCEEEEEcC-CccCHHHhhhCCc
Q 001638 728 ARSSPTDKYILVTQLR-NVFKEVVAVTGN-GTNDAPALHEADI 768 (1039)
Q Consensus 728 ar~sP~~K~~~V~~l~-~~~g~~V~~~GD-G~ND~~aL~~AdV 768 (1039)
.+-.|+-=..+.+.++ -. .+.++|+|| ..+|..+-+.|++
T Consensus 84 ~KP~~~~~~~~~~~~~~~~-~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 84 RKPKPGMFLEALKRFNEID-PEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred CCCChHHHHHHHHHcCCCC-hhheEEEcCCCcccHHHHHHCCC
Confidence 0111222123333332 22 367899999 5999999998875
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.018 Score=66.28 Aligned_cols=120 Identities=18% Similarity=0.213 Sum_probs=81.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.||+.+.++.|+++|+++.++|+.+...+..+-+..||..--+.++.+.+... ..-.|+-=.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~----------------~KP~Peifl 279 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYR----------------GKPDPEMFI 279 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCC----------------CCCCHHHHH
Confidence 3679999999999999999999999999999999999999764444555444211 111222223
Q ss_pred HHHHHHhhcCCCEEEEEcCCccCHHHhhhCCccee-ecCCCcHHH-HhccCEEeecCCchHH
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLA-MGIAGTEVA-KENADVIIMDDNFTTI 796 (1039)
Q Consensus 737 ~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIa-mgi~gt~~a-k~~aDivl~dd~f~~i 796 (1039)
...+.+.-. .+.++|+||..+|+.|-+.|++-.. +. .+.+.. ...+|+++.+ +..+
T Consensus 280 ~A~~~lgl~-Peecl~IGDS~~DIeAAk~AGm~~IgV~-~~~~~~~l~~Ad~iI~s--~~EL 337 (381)
T PLN02575 280 YAAQLLNFI-PERCIVFGNSNQTVEAAHDARMKCVAVA-SKHPIYELGAADLVVRR--LDEL 337 (381)
T ss_pred HHHHHcCCC-cccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCChhHhcCCCEEECC--HHHH
Confidence 333444333 4678899999999999999997322 22 222222 2358888743 5544
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.011 Score=63.93 Aligned_cols=86 Identities=19% Similarity=0.239 Sum_probs=62.7
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCC----HHHHHHHHHHcCCC--CCCCceeeCcccccCCHHHHHhhcccceEEEecC
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDN----IHTAKAIAKECGIL--TDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSS 731 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~----~~ta~~iA~~~GI~--~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~s 731 (1039)
+.|++++.++.+++.|+++.++||+. ..+++.+.+..|+. .....++.|.+. .
T Consensus 115 p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~---------------------~ 173 (237)
T PRK11009 115 PKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP---------------------G 173 (237)
T ss_pred chHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------C
Confidence 67889999999999999999999964 67999999999993 322222222210 1
Q ss_pred hhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcc
Q 001638 732 PTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 732 P~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVG 769 (1039)
..+|.. .+++. + +++++||..+|..+-++|++-
T Consensus 174 K~~K~~---~l~~~-~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 174 QYTKTQ---WLKKK-N-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred CCCHHH---HHHhc-C-CeEEEcCCHHHHHHHHHcCCc
Confidence 134544 34444 4 478899999999999999873
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.012 Score=62.92 Aligned_cols=93 Identities=16% Similarity=0.165 Sum_probs=66.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecCh--hh
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSP--TD 734 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP--~~ 734 (1039)
++.||+.++++.|+++|+++.++|+-+...+....+.+|+...-+.++.+.+.. +..| +-
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~------------------~~KP~~~~ 155 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEG------------------VEKPHPKI 155 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCC------------------CCCCCHHH
Confidence 478999999999999999999999999888888889999865333333333321 1223 21
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCc-cCHHHhhhCCc
Q 001638 735 KYILVTQLRNVFKEVVAVTGNGT-NDAPALHEADI 768 (1039)
Q Consensus 735 K~~~V~~l~~~~g~~V~~~GDG~-ND~~aL~~AdV 768 (1039)
=....+.+.-. .+.+.++||.. +|..+-++|++
T Consensus 156 ~~~~~~~~~~~-~~~~~~igDs~~~di~~A~~aG~ 189 (221)
T TIGR02253 156 FYAALKRLGVK-PEEAVMVGDRLDKDIKGAKNLGM 189 (221)
T ss_pred HHHHHHHcCCC-hhhEEEECCChHHHHHHHHHCCC
Confidence 12222333222 35688999998 99999999987
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.016 Score=59.74 Aligned_cols=94 Identities=17% Similarity=0.184 Sum_probs=63.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.|++.+.++.|+++|+++.++|+-.... ..+..++|+...-..++.+.+.. ...-+|+-=.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~----------------~~KP~~~~~~ 147 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVG----------------RGKPDPDIYL 147 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCC----------------CCCCCHHHHH
Confidence 578999999999999999999999988877 66666688865333344333211 0111222223
Q ss_pred HHHHHHhhcCCCEEEEEcCCccCHHHhhhCCc
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADI 768 (1039)
Q Consensus 737 ~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdV 768 (1039)
.+.+.+.-. ...+.++||...|..+-+++++
T Consensus 148 ~~~~~~~~~-~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 148 LALKKLGLK-PEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHcCCC-cceEEEEcCCHHHHHHHHHcCC
Confidence 333333333 4678899999999999888876
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.0083 Score=62.07 Aligned_cols=94 Identities=11% Similarity=0.174 Sum_probs=60.9
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.||+.++++.|+++|+++.++|+... +..+.+.+|+...-..++++.+.. ..+-.|+-=.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~----------------~~kp~p~~~~ 148 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIK----------------KGKPDPEIFL 148 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcC----------------CCCCChHHHH
Confidence 5689999999999999999999997532 456778888865333444333321 0111222112
Q ss_pred HHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcc
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 737 ~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVG 769 (1039)
...+.+.-. .+.+.|+||+.+|..+-+.|++-
T Consensus 149 ~~~~~~~~~-~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 149 AAAEGLGVS-PSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHcCCC-HHHeEEEecCHHHHHHHHHcCCE
Confidence 222222222 24588899999999999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.015 Score=65.34 Aligned_cols=108 Identities=13% Similarity=-0.023 Sum_probs=75.2
Q ss_pred ccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC-CCCceeeCcccccCCHHHHHhhcccceEEEecCh
Q 001638 654 IKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILT-DGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSP 732 (1039)
Q Consensus 654 i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~-~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP 732 (1039)
..+++.|++.++++.|++.|+++.++||.....+..+.+.+|+.. .-.. +.|.+. ....+... --.+-.|
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~-i~~~~~-------~~~~~~~~-~~~kp~p 254 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDD-LIGRPP-------DMHFQREQ-GDKRPDD 254 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhh-hhCCcc-------hhhhcccC-CCCCCcH
Confidence 568999999999999999999999999999999999999999864 2111 112110 00000000 0013446
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcce
Q 001638 733 TDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGL 770 (1039)
Q Consensus 733 ~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGI 770 (1039)
+-+...++.+.....+.++|+||..+|+.+-+.|++-.
T Consensus 255 ~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 255 VVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred HHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 66666666553311367999999999999999998754
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.018 Score=67.15 Aligned_cols=116 Identities=14% Similarity=0.126 Sum_probs=73.9
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH-HcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAK-ECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK 735 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~-~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 735 (1039)
++.||+.+.++.|++.|+++.++|+.....+...-+ ..|+...-+.++.+.+.. ...-.|+-=
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~----------------~~KP~p~~~ 156 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVE----------------KGKPSPDIF 156 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcC----------------CCCCCHHHH
Confidence 367999999999999999999999999888877665 678765434444443321 011122222
Q ss_pred HHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcce-eecC-CCcHHHHhccCEEee
Q 001638 736 YILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGL-AMGI-AGTEVAKENADVIIM 789 (1039)
Q Consensus 736 ~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGI-amgi-~gt~~ak~~aDivl~ 789 (1039)
...++.+.-. .+.+.|+||+.+|..+-+.|++.. .+.- ...+.....+|.++.
T Consensus 157 ~~a~~~lgv~-p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~ 211 (382)
T PLN02940 157 LEAAKRLNVE-PSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVIN 211 (382)
T ss_pred HHHHHHcCCC-hhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeC
Confidence 2333333323 456888999999999999999753 2221 122223345666654
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.021 Score=60.97 Aligned_cols=119 Identities=14% Similarity=0.103 Sum_probs=76.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhh--
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTD-- 734 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~-- 734 (1039)
++.||+.+.++.|++. +++.++|+-....+..+.+++|+..--+.++.+.+.. ...|..
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~------------------~~KP~~~~ 157 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAG------------------IQKPDKEI 157 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccC------------------CCCCCHHH
Confidence 4689999999999999 9999999999999999999999965333333332211 112321
Q ss_pred HHHHHHHH-hhcCCCEEEEEcCCc-cCHHHhhhCCc---ceeecCCCcHHHHhccCEEeecCCchHHHH
Q 001638 735 KYILVTQL-RNVFKEVVAVTGNGT-NDAPALHEADI---GLAMGIAGTEVAKENADVIIMDDNFTTIVT 798 (1039)
Q Consensus 735 K~~~V~~l-~~~~g~~V~~~GDG~-ND~~aL~~AdV---GIamgi~gt~~ak~~aDivl~dd~f~~i~~ 798 (1039)
=...++.+ .-. .+.++++||+. +|..+-+.+++ ++..| ...+.....+|+++. ++..+..
T Consensus 158 ~~~~~~~~~~~~-~~~~v~igD~~~~di~~A~~~G~~~i~~~~~-~~~~~~~~~~~~~~~--~~~el~~ 222 (224)
T TIGR02254 158 FNYALERMPKFS-KEEVLMIGDSLTADIKGGQNAGLDTCWMNPD-MHPNPDDIIPTYEIR--SLEELYE 222 (224)
T ss_pred HHHHHHHhcCCC-chheEEECCCcHHHHHHHHHCCCcEEEECCC-CCCCCCCCCCceEEC--CHHHHHh
Confidence 12333333 222 35688999998 89999999996 33323 122122235677764 4665554
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.05 Score=56.37 Aligned_cols=126 Identities=15% Similarity=0.093 Sum_probs=69.7
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCH---------------HHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcc
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNI---------------HTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIP 722 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~---------------~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~ 722 (1039)
+.||+.++++.|++.|+++.++|..+. .....+-+..|+.-+ .++.......
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~--~i~~~~~~~~----------- 96 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD--GIYYCPHHPE----------- 96 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc--eEEECCCCCC-----------
Confidence 589999999999999999999998763 112223344555211 1111000000
Q ss_pred cceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecC-CCc--H-HHHhcc--CEEeecCCchHH
Q 001638 723 KLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGI-AGT--E-VAKENA--DVIIMDDNFTTI 796 (1039)
Q Consensus 723 ~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi-~gt--~-~ak~~a--Divl~dd~f~~i 796 (1039)
...-..+-.|+--....+.+.-. .+.++|+||+.+|..+-+.|++. +++. .|. + .....+ |+++. ++..+
T Consensus 97 ~~~~~~KP~p~~~~~~~~~l~~~-~~~~~~VgDs~~Di~~A~~aG~~-~i~v~~g~~~~~~~~~~~~~~~ii~--~l~el 172 (181)
T PRK08942 97 DGCDCRKPKPGMLLSIAERLNID-LAGSPMVGDSLRDLQAAAAAGVT-PVLVRTGKGVTTLAEGAAPGTWVLD--SLADL 172 (181)
T ss_pred CCCcCCCCCHHHHHHHHHHcCCC-hhhEEEEeCCHHHHHHHHHCCCe-EEEEcCCCCchhhhcccCCCceeec--CHHHH
Confidence 00000112233333344444333 46788999999999999999973 2221 222 1 122335 77774 47666
Q ss_pred HHHH
Q 001638 797 VTVA 800 (1039)
Q Consensus 797 ~~~i 800 (1039)
..++
T Consensus 173 ~~~l 176 (181)
T PRK08942 173 PQAL 176 (181)
T ss_pred HHHH
Confidence 6654
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.022 Score=57.35 Aligned_cols=100 Identities=20% Similarity=0.202 Sum_probs=72.6
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcC----CCCC----CC--ceeeCcccccCCHHHHHhhcccceE
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECG----ILTD----GG--LAIEGTDFRSKNPQEMQELIPKLQV 726 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~G----I~~~----~~--~vi~G~~~~~~~~~~~~~~~~~~~v 726 (1039)
.++|+.++.++.+++.+++++++|+-...-...+-...+ |... ++ .-.+|.-.- +
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i---------------~ 137 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSI---------------K 137 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceee---------------e
Confidence 369999999999999999999999988888888777666 3210 00 011111110 1
Q ss_pred EEecC--hhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceee
Q 001638 727 MARSS--PTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAM 772 (1039)
Q Consensus 727 ~ar~s--P~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIam 772 (1039)
....+ --+|...|+.+++. .+.+.++|||+.|..|-+.+|+=+|-
T Consensus 138 ~~~ds~fG~dK~~vI~~l~e~-~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 138 YTDDSQFGHDKSSVIHELSEP-NESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred cCCccccCCCcchhHHHhhcC-CceEEEecCCcccccHhhhhhhHhhH
Confidence 11111 24899999999998 78899999999999999999988753
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.014 Score=60.36 Aligned_cols=92 Identities=15% Similarity=0.207 Sum_probs=61.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhH-
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK- 735 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K- 735 (1039)
++.||+.+.++.|+++|+++.++|+. ..+..+-+.+|+..--..++.+.+.. +..|...
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~------------------~~kp~~~~ 147 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVK------------------EGKPHPET 147 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCC------------------CCCCChHH
Confidence 57999999999999999999999987 66777888889864322333222211 1223211
Q ss_pred -HHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcc
Q 001638 736 -YILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 736 -~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVG 769 (1039)
....+.+.-. .+.+.++||+.+|..+-+.|++.
T Consensus 148 ~~~~~~~~~~~-~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 148 FLLAAELLGVS-PNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred HHHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCe
Confidence 1222222222 35578899999999999999874
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.031 Score=60.16 Aligned_cols=95 Identities=13% Similarity=0.033 Sum_probs=66.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecCh--hh
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSP--TD 734 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP--~~ 734 (1039)
++.||+.+.++.|+++|+++.++|+-+...+...-+..|+..--..++.+.++. +..| +-
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~------------------~~KP~p~~ 154 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFG------------------YPKEDQRL 154 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCC------------------CCCCCHHH
Confidence 568999999999999999999999999888888888888865333333332221 1122 11
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcce
Q 001638 735 KYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGL 770 (1039)
Q Consensus 735 K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGI 770 (1039)
=....+.+.-. .+.++++||..+|..+-+.|++..
T Consensus 155 ~~~~~~~~~~~-p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 155 WQAVAEHTGLK-AERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred HHHHHHHcCCC-hHHEEEEcCCHHHHHHHHHcCCeE
Confidence 11222223222 356889999999999999999863
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.1 Score=60.19 Aligned_cols=63 Identities=16% Similarity=0.142 Sum_probs=46.4
Q ss_pred hhHHHHHHHHhhcCC-----C-EEEEEcCCccCHHHhhh-----CCcceeecCCCcHHHHhccCEEeecCCchHHHHHH
Q 001638 733 TDKYILVTQLRNVFK-----E-VVAVTGNGTNDAPALHE-----ADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVA 800 (1039)
Q Consensus 733 ~~K~~~V~~l~~~~g-----~-~V~~~GDG~ND~~aL~~-----AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i 800 (1039)
-+|...|+.+.+..| . .++++||+.||..||+. +++||+|| +|... ..|++.|.+ -..+...+
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~~--t~A~y~L~d--p~eV~~~L 373 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPKE--SNAFYSLRD--PSEVMEFL 373 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCCC--ccceEEcCC--HHHHHHHH
Confidence 389988888876644 1 25899999999999996 68999999 65542 257888764 55555554
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.02 Score=58.03 Aligned_cols=97 Identities=24% Similarity=0.277 Sum_probs=68.6
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhH
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK 735 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 735 (1039)
.++.|++.+.++.|++.|++++++|+..........+.+|+...-+.++...+.... .-.|+-=
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~----------------Kp~~~~~ 139 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSR----------------KPDPDAY 139 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSS----------------TTSHHHH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhh----------------hhHHHHH
Confidence 346899999999999999999999999999999999999987433344333332211 0112222
Q ss_pred HHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcc
Q 001638 736 YILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 736 ~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVG 769 (1039)
..+++.+.-. .+.+.++||+..|..+-++|++-
T Consensus 140 ~~~~~~~~~~-p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 140 RRALEKLGIP-PEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHTSS-GGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHcCCC-cceEEEEeCCHHHHHHHHHcCCe
Confidence 2333334333 46688999999999999988764
|
... |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.043 Score=56.40 Aligned_cols=114 Identities=15% Similarity=0.133 Sum_probs=73.0
Q ss_pred CcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCC-CHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhccc
Q 001638 645 NYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGD-NIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPK 723 (1039)
Q Consensus 645 ~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD-~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~ 723 (1039)
+.......+-+-++.||+.+.++.|+++|+++.++|+- ....+..+-..+|+...+... .+...+..
T Consensus 33 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~------------~~~~~Fd~ 100 (174)
T TIGR01685 33 NSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTV------------PMHSLFDD 100 (174)
T ss_pred CCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcc------------cHHHhcee
Confidence 33455566666788999999999999999999999976 899999999999986211000 00000100
Q ss_pred ceEEEecChhhH--HHHHHHHhhcC-----CCEEEEEcCCccCHHHhhhCCccee
Q 001638 724 LQVMARSSPTDK--YILVTQLRNVF-----KEVVAVTGNGTNDAPALHEADIGLA 771 (1039)
Q Consensus 724 ~~v~ar~sP~~K--~~~V~~l~~~~-----g~~V~~~GDG~ND~~aL~~AdVGIa 771 (1039)
+ +.+...+..| ..+.+.+.+.. .+.++|+||...|+.+-++|++-..
T Consensus 101 i-v~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i 154 (174)
T TIGR01685 101 R-IEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSC 154 (174)
T ss_pred e-eeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEE
Confidence 0 1111111112 23344443321 3568999999999999999987553
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.041 Score=58.96 Aligned_cols=122 Identities=13% Similarity=0.129 Sum_probs=76.6
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.||+.+.++.|+ +|+++.++|......+...-+.+|+...-+.++.+.+.. ...|. ..
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~------------------~~KP~-p~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVG------------------VAKPD-VA 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccC------------------CCCCC-HH
Confidence 36899999999999 689999999999988888888889865323333322211 11232 11
Q ss_pred HHHHHHhhcC---CCEEEEEcCCc-cCHHHhhhCCcc-eeecCCCcH-HHHhccCEEeecCCchHHHHHH
Q 001638 737 ILVTQLRNVF---KEVVAVTGNGT-NDAPALHEADIG-LAMGIAGTE-VAKENADVIIMDDNFTTIVTVA 800 (1039)
Q Consensus 737 ~~V~~l~~~~---g~~V~~~GDG~-ND~~aL~~AdVG-Iamgi~gt~-~ak~~aDivl~dd~f~~i~~~i 800 (1039)
-+...+++.. .+.+.++||+. +|..+-+.|++- |.....+.+ .....+|+++. ++..+..++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~--~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVS--SLSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEEC--CHHHHHHHH
Confidence 2222333220 24689999998 799999999974 333211211 11124788774 477766554
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.055 Score=60.51 Aligned_cols=116 Identities=19% Similarity=0.195 Sum_probs=71.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCC--ceeeCcccccCCHHHHHhhcccceEEEecChhh
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGG--LAIEGTDFRSKNPQEMQELIPKLQVMARSSPTD 734 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~--~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 734 (1039)
++.||+.+.++.|++.|+++.++|+-+......+-+..+...-.. .++.+.+.. ...-.|+-
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~----------------~~KP~p~~ 207 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVP----------------KKKPDPDI 207 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccC----------------CCCCCHHH
Confidence 478999999999999999999999998888877766553221100 111222210 01112222
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCc--HHHHhccCEEee
Q 001638 735 KYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGT--EVAKENADVIIM 789 (1039)
Q Consensus 735 K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt--~~ak~~aDivl~ 789 (1039)
=..+.+.+.-. .+.++|+||+.+|..+-++|++....-..|. ......+|+++.
T Consensus 208 ~~~a~~~~~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~ 263 (286)
T PLN02779 208 YNLAAETLGVD-PSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD 263 (286)
T ss_pred HHHHHHHhCcC-hHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC
Confidence 22333333333 3568899999999999999997554322322 111235788874
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.065 Score=57.39 Aligned_cols=96 Identities=15% Similarity=0.208 Sum_probs=58.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHH-HHHHcCCCCCCCceeeCc--ccccCCHHHHHhhcccceEEEecChh
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKA-IAKECGILTDGGLAIEGT--DFRSKNPQEMQELIPKLQVMARSSPT 733 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~-iA~~~GI~~~~~~vi~G~--~~~~~~~~~~~~~~~~~~v~ar~sP~ 733 (1039)
++.||+.+.++.|+++|+++.++||-....... ..+..|+......++.+. +.. ...-.|+
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~----------------~~KP~p~ 141 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVK----------------QGKPAPD 141 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhcc----------------CCCCCcH
Confidence 468999999999999999999999987654432 222234432222233332 110 0011222
Q ss_pred hHHHHHHHHh---hcCCCEEEEEcCCccCHHHhhhCCcc
Q 001638 734 DKYILVTQLR---NVFKEVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 734 ~K~~~V~~l~---~~~g~~V~~~GDG~ND~~aL~~AdVG 769 (1039)
-=...++.+. -. .+.+.|+||+..|+.+-+.|++-
T Consensus 142 ~~~~a~~~~~~~~~~-~~~~v~IgDs~~di~aA~~aG~~ 179 (220)
T PLN02811 142 IFLAAARRFEDGPVD-PGKVLVFEDAPSGVEAAKNAGMS 179 (220)
T ss_pred HHHHHHHHhCCCCCC-ccceEEEeccHhhHHHHHHCCCe
Confidence 2223333332 11 35689999999999999999974
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.064 Score=53.74 Aligned_cols=90 Identities=16% Similarity=0.189 Sum_probs=57.3
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHH
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYI 737 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~ 737 (1039)
..||+.+.++.|++.|+++.++|+-....+....+.. +......++...+ +...-.|+-=..
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~-----------------~~~Kp~~~~~~~ 126 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDE-----------------FGAKPEPEIFLA 126 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCC-----------------CCCCcCHHHHHH
Confidence 4589999999999999999999999999988887775 4322112211111 111112222122
Q ss_pred HHHHHhhcCCCEEEEEcCCccCHHHhhhCC
Q 001638 738 LVTQLRNVFKEVVAVTGNGTNDAPALHEAD 767 (1039)
Q Consensus 738 ~V~~l~~~~g~~V~~~GDG~ND~~aL~~Ad 767 (1039)
+.+.+.-. . .++++||..+|..+-++|+
T Consensus 127 ~~~~~~~~-~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 127 ALESLGLP-P-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHcCCC-C-CEEEEeCCHHHHHHHHHcc
Confidence 22223222 3 6899999999999887764
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.077 Score=55.90 Aligned_cols=92 Identities=14% Similarity=0.202 Sum_probs=59.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++-||+.++++.|+++|+++.++|+-... .....+.+|+...-+.++...+.. ...|. ..
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~------------------~~KP~-~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVG------------------AEKPD-PK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccC------------------CCCCC-HH
Confidence 46899999999999999999999986654 467778888854322222222211 01222 11
Q ss_pred HHHHHHhhc--CCCEEEEEcCCc-cCHHHhhhCCc
Q 001638 737 ILVTQLRNV--FKEVVAVTGNGT-NDAPALHEADI 768 (1039)
Q Consensus 737 ~~V~~l~~~--~g~~V~~~GDG~-ND~~aL~~AdV 768 (1039)
-+...+++. ..+.++++||+. +|..+-++|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 222223332 035689999997 89998888865
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.093 Score=53.88 Aligned_cols=85 Identities=24% Similarity=0.274 Sum_probs=60.4
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCC-HHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhh
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDN-IHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTD 734 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~-~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 734 (1039)
..+-|++.++++.|++.|+++.++|+.+ ...+..+.+.+|+.. ......|..
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~---------------------------~~~~~KP~p 94 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV---------------------------LPHAVKPPG 94 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE---------------------------EcCCCCCCh
Confidence 3578999999999999999999999988 677888888888742 111122321
Q ss_pred HHHHHHHHhhc--CCCEEEEEcCCc-cCHHHhhhCCc
Q 001638 735 KYILVTQLRNV--FKEVVAVTGNGT-NDAPALHEADI 768 (1039)
Q Consensus 735 K~~~V~~l~~~--~g~~V~~~GDG~-ND~~aL~~AdV 768 (1039)
. .+...+++. ..+.++|+||.. .|..+-+.|++
T Consensus 95 ~-~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi 130 (170)
T TIGR01668 95 C-AFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGS 130 (170)
T ss_pred H-HHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCC
Confidence 1 222223322 035589999998 79999999987
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.23 Score=51.58 Aligned_cols=37 Identities=14% Similarity=0.144 Sum_probs=33.9
Q ss_pred cHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC
Q 001638 661 GVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGIL 697 (1039)
Q Consensus 661 ~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~ 697 (1039)
.+.+.+.+|+++|++|+.+|.-....-...-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678899999999999999999999999999999987
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=94.23 E-value=0.18 Score=52.00 Aligned_cols=27 Identities=22% Similarity=0.246 Sum_probs=24.5
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCH
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNI 684 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~ 684 (1039)
+.||+.++++.|+++|+++.++|.-+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 578999999999999999999998663
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=94.13 E-value=0.31 Score=62.39 Aligned_cols=50 Identities=16% Similarity=0.135 Sum_probs=37.3
Q ss_pred CcEeeeeecccCCCCccHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHc
Q 001638 645 NYTLIAVVGIKDPVRPGVREAVETC-LAAGITVRMVTGDNIHTAKAIAKEC 694 (1039)
Q Consensus 645 ~l~~lG~v~i~D~lR~~v~~aI~~l-~~aGi~v~m~TGD~~~ta~~iA~~~ 694 (1039)
|.|++-.....-.+-|++.+++++| ++.|+.|.++||+...+....-..+
T Consensus 604 DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 604 DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 4455433322335668999999996 7889999999999999998877543
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.11 Score=55.95 Aligned_cols=112 Identities=16% Similarity=0.193 Sum_probs=73.6
Q ss_pred CCCccHHHHHHHH--HHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcc-cceEEEecCh-
Q 001638 657 PVRPGVREAVETC--LAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIP-KLQVMARSSP- 732 (1039)
Q Consensus 657 ~lR~~v~~aI~~l--~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~-~~~v~ar~sP- 732 (1039)
|+.|+.+++++.| ++.|+.+.++|--|..--..|-+.-|+...-..+.+.+..-+-.. ...+-+ ...-+.+|.|
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G--~l~v~pyh~h~C~~C~~N 148 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADG--RLRVRPYHSHGCSLCPPN 148 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCc--eEEEeCccCCCCCcCCCc
Confidence 6789999999999 568999999999999999999999998754333333322111000 000000 0012335554
Q ss_pred hhHHHHHHHHhhc---CC---CEEEEEcCCccCHHHh---hhCCcce
Q 001638 733 TDKYILVTQLRNV---FK---EVVAVTGNGTNDAPAL---HEADIGL 770 (1039)
Q Consensus 733 ~~K~~~V~~l~~~---~g---~~V~~~GDG~ND~~aL---~~AdVGI 770 (1039)
.-|..+++.+++. .| ..|.++|||.||-... +.+|+-.
T Consensus 149 mCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~ 195 (234)
T PF06888_consen 149 MCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVF 195 (234)
T ss_pred cchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEe
Confidence 4799999888654 13 6899999999997643 3455544
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.066 Score=53.62 Aligned_cols=92 Identities=14% Similarity=0.006 Sum_probs=64.9
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCC-CceeeCcccccCCHHHHHhhcccceEEEecChhhH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG-GLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK 735 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~-~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 735 (1039)
++|||+.+.++.|+ .++++.++|.-+...+..+-+.+|+...- ..++.+.+... ..|.
T Consensus 45 ~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~------------------~KP~-- 103 (148)
T smart00577 45 KKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVF------------------VKGK-- 103 (148)
T ss_pred EECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccc------------------cCCe--
Confidence 57999999999999 57999999999999999999999885321 33344333211 1121
Q ss_pred HHHHHHHhhc--CCCEEEEEcCCccCHHHhhhCCccee
Q 001638 736 YILVTQLRNV--FKEVVAVTGNGTNDAPALHEADIGLA 771 (1039)
Q Consensus 736 ~~~V~~l~~~--~g~~V~~~GDG~ND~~aL~~AdVGIa 771 (1039)
+.+.++.. ..+.+.++||..+|..+-++|.|-|.
T Consensus 104 --~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 104 --YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred --EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 33333322 14678899999999998888866553
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.36 Score=48.36 Aligned_cols=110 Identities=17% Similarity=0.251 Sum_probs=77.8
Q ss_pred HHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
Q 001638 614 INGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKE 693 (1039)
Q Consensus 614 i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~ 693 (1039)
.+.+..+|++++.+- ++ -|+++.= ....-|++++-++.++.+|+++.++|.-++..+...+..
T Consensus 20 ~~~L~~~Gikgvi~D---lD------------NTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~ 82 (175)
T COG2179 20 PDILKAHGIKGVILD---LD------------NTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEK 82 (175)
T ss_pred HHHHHHcCCcEEEEe---cc------------Cceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhh
Confidence 456788999998764 22 2333221 234678999999999999999999999999999999999
Q ss_pred cCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhc--CCCEEEEEcCCc-cCHHHhhhCCc
Q 001638 694 CGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNV--FKEVVAVTGNGT-NDAPALHEADI 768 (1039)
Q Consensus 694 ~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~--~g~~V~~~GDG~-ND~~aL~~AdV 768 (1039)
+|+.- ++--..|-.+ .+-+++++. ..+.|+|+||.. .|+-+=+.|++
T Consensus 83 l~v~f---------------------------i~~A~KP~~~-~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 83 LGVPF---------------------------IYRAKKPFGR-AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred cCCce---------------------------eecccCccHH-HHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 99975 3333345443 455555554 146799999984 47766555543
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.33 Score=52.86 Aligned_cols=94 Identities=16% Similarity=0.189 Sum_probs=60.1
Q ss_pred eeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHH--HHHHHcCCCC-CCCceeeCcccccCCHHHHHhhcccceE
Q 001638 650 AVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAK--AIAKECGILT-DGGLAIEGTDFRSKNPQEMQELIPKLQV 726 (1039)
Q Consensus 650 G~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~--~iA~~~GI~~-~~~~vi~G~~~~~~~~~~~~~~~~~~~v 726 (1039)
|.+.-.+.+-|++.++++.|+++|+++.++|.-....+. ...+++|+.. ....+++..+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~----------------- 79 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEI----------------- 79 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHH-----------------
Confidence 344445678999999999999999999999986654444 5668889864 22222221110
Q ss_pred EEecChhhHHHHHHHHhhc--CCCEEEEEcCCccCHHHhhhCC
Q 001638 727 MARSSPTDKYILVTQLRNV--FKEVVAVTGNGTNDAPALHEAD 767 (1039)
Q Consensus 727 ~ar~sP~~K~~~V~~l~~~--~g~~V~~~GDG~ND~~aL~~Ad 767 (1039)
...-+.+.+++. .+..+.++||+.+|...+..++
T Consensus 80 -------~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 80 -------AVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred -------HHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 011122222221 1456899999999998886443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.31 Score=53.63 Aligned_cols=87 Identities=11% Similarity=0.134 Sum_probs=60.0
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEECCCCHH---HHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecC
Q 001638 655 KDPVRPGVREAVETCLAAGITVRMVTGDNIH---TAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSS 731 (1039)
Q Consensus 655 ~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~---ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~s 731 (1039)
..++-||+.+.++.+++.|+++.++|+.... .+...-+..|+...... .++.|-.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d----------------------~lllr~~ 173 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE----------------------HLLLKKD 173 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc----------------------eEEeCCC
Confidence 3457899999999999999999999998743 34455667888541100 1333322
Q ss_pred hhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhh
Q 001638 732 PTDKYILVTQLRNVFKEVVAVTGNGTNDAPALH 764 (1039)
Q Consensus 732 P~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~ 764 (1039)
...|..-.+.+.+. -++++++||-.+|.....
T Consensus 174 ~~~K~~rr~~I~~~-y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 174 KSSKESRRQKVQKD-YEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCcHHHHHHHHhc-CCEEEEECCCHHHhhhhh
Confidence 33455555566555 578999999999986543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=93.84 E-value=0.12 Score=51.63 Aligned_cols=96 Identities=24% Similarity=0.291 Sum_probs=58.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCH---------------HHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhc
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNI---------------HTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELI 721 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~---------------~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~ 721 (1039)
++.||+.++++.|+++|+++.++|..+. ..+..+.+.+|+... .. ..+......
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~-~~~~~~~~~--------- 95 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD-GV-LFCPHHPAD--------- 95 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee-EE-EECCCCCCC---------
Confidence 4689999999999999999999998762 455667778887521 00 000000000
Q ss_pred ccceEEEecChhhHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcc
Q 001638 722 PKLQVMARSSPTDKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 722 ~~~~v~ar~sP~~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVG 769 (1039)
.... ..| +.++.+...+..| +.+.|+||...|..+-+.|++-
T Consensus 96 ---~~~~-~KP--~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 96 ---NCSC-RKP--KPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred ---CCCC-CCC--CHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 0000 123 2223333222213 5689999999999999988764
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=93.71 E-value=0.099 Score=48.72 Aligned_cols=89 Identities=22% Similarity=0.235 Sum_probs=55.4
Q ss_pred eeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHH---HHcCCCCCCCceeeCcccccCCHHHHHhhcccceE
Q 001638 650 AVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIA---KECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQV 726 (1039)
Q Consensus 650 G~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA---~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v 726 (1039)
|++...+.+=||+.++++.|+++|++++++|.....+...++ +.+|+..+.+. +
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~-----------------------i 63 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDE-----------------------I 63 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGG-----------------------E
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCE-----------------------E
Confidence 556667888999999999999999999999998755544444 66888653222 2
Q ss_pred EEecChhhHHHHHHHHhh-cCCCEEEEEcCCccCHHHhhhCC
Q 001638 727 MARSSPTDKYILVTQLRN-VFKEVVAVTGNGTNDAPALHEAD 767 (1039)
Q Consensus 727 ~ar~sP~~K~~~V~~l~~-~~g~~V~~~GDG~ND~~aL~~Ad 767 (1039)
+. |. ....+.|++ ..+..|.++|.. .....++.++
T Consensus 64 ~t---s~--~~~~~~l~~~~~~~~v~vlG~~-~l~~~l~~~G 99 (101)
T PF13344_consen 64 IT---SG--MAAAEYLKEHKGGKKVYVLGSD-GLREELREAG 99 (101)
T ss_dssp EE---HH--HHHHHHHHHHTTSSEEEEES-H-HHHHHHHHTT
T ss_pred EC---hH--HHHHHHHHhcCCCCEEEEEcCH-HHHHHHHHcC
Confidence 22 11 123344444 336788888865 5555666554
|
... |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=93.71 E-value=0.17 Score=66.52 Aligned_cols=135 Identities=13% Similarity=0.153 Sum_probs=85.0
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC-CCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGIL-TDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~-~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
+-||+.+.++.|+++|+++.++|+-....+..+-+..|+. ..-+.++.+.+... ..-.|+-=.
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~----------------~KP~Pe~~~ 225 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFEN----------------LKPAPDIFL 225 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECccccc----------------CCCCHHHHH
Confidence 5799999999999999999999999999999998999985 22233444433211 111222222
Q ss_pred HHHHHHhhcCCCEEEEEcCCccCHHHhhhCCc---ceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHH
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADI---GLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYIN 809 (1039)
Q Consensus 737 ~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdV---GIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~n 809 (1039)
...+.+.-. .+.+.++||..+|+.+-+.|++ ++.-+....+.....+|+++.+-.--++..++..|-..+.|
T Consensus 226 ~a~~~lgv~-p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~~~~~~~ 300 (1057)
T PLN02919 226 AAAKILGVP-TSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILTGGSDATPN 300 (1057)
T ss_pred HHHHHcCcC-cccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHhcCCCCCCC
Confidence 333333333 4568889999999999999986 33223222233455788888653222344455444444443
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=93.27 E-value=0.32 Score=52.11 Aligned_cols=89 Identities=15% Similarity=0.099 Sum_probs=58.2
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEECCCCHHH---HHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecC
Q 001638 655 KDPVRPGVREAVETCLAAGITVRMVTGDNIHT---AKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSS 731 (1039)
Q Consensus 655 ~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~t---a~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~s 731 (1039)
+-|.-|++.++++.+++.|++|+++||+.... +..--++.|+..-..+++-+.+-.. ...
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~~d~~-----------------~~~ 180 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDSN-----------------KTV 180 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCCCCCC-----------------chH
Confidence 35788999999999999999999999999765 3333345677642233332211000 001
Q ss_pred hhhHHHHHHHHhhcCCCEEEEEcCCccCH
Q 001638 732 PTDKYILVTQLRNVFKEVVAVTGNGTNDA 760 (1039)
Q Consensus 732 P~~K~~~V~~l~~~~g~~V~~~GDG~ND~ 760 (1039)
-+-|...-+.+.+..-++++.+||-.+|.
T Consensus 181 ~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 181 VTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred hHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 11266666666655247899999999987
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.26 E-value=0.22 Score=57.09 Aligned_cols=98 Identities=23% Similarity=0.172 Sum_probs=60.2
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCC---------------CHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhh
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGD---------------NIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQEL 720 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD---------------~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~ 720 (1039)
-++.|++.++++.|+++|+++.++|+- ....+..+.+..|+.. ....+.. ... .+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f-d~i~i~~-~~~--sd------ 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF-DEVLICP-HFP--ED------ 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce-eeEEEeC-CcC--cc------
Confidence 357999999999999999999999983 2344666777777742 1111110 000 00
Q ss_pred cccceEEEecChhhHHHHHHHHhhcC---CCEEEEEcCCccCHHHhhhCCcce
Q 001638 721 IPKLQVMARSSPTDKYILVTQLRNVF---KEVVAVTGNGTNDAPALHEADIGL 770 (1039)
Q Consensus 721 ~~~~~v~ar~sP~~K~~~V~~l~~~~---g~~V~~~GDG~ND~~aL~~AdVGI 770 (1039)
+ ..+| .| |..++..+.++. ...+.|+||+.+|..+-+.|++-.
T Consensus 99 --~--~~~r-KP--~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~ 144 (354)
T PRK05446 99 --N--CSCR-KP--KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKG 144 (354)
T ss_pred --c--CCCC-CC--CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeE
Confidence 0 0011 22 233343332221 367899999999999999998753
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=92.76 E-value=0.19 Score=51.17 Aligned_cols=97 Identities=20% Similarity=0.135 Sum_probs=59.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCC---------------CHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhc
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGD---------------NIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELI 721 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD---------------~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~ 721 (1039)
++-||+.++++.|+++|+++.++|.- ....+..+.+.+|+.- ..++-+..+.. +
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f--d~ii~~~~~~~--~------- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF--DDVLICPHFPD--D------- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce--eEEEECCCCCC--C-------
Confidence 45789999999999999999999984 2456677778888841 11111100000 0
Q ss_pred ccceEEEecChhhHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcce
Q 001638 722 PKLQVMARSSPTDKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGL 770 (1039)
Q Consensus 722 ~~~~v~ar~sP~~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGI 770 (1039)
.+.. ..| |..++..+.+..+ +.+.|+||+.+|..+-+.|++-.
T Consensus 98 ---~~~~-~KP--~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~ 143 (161)
T TIGR01261 98 ---NCDC-RKP--KIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRG 143 (161)
T ss_pred ---CCCC-CCC--CHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeE
Confidence 0001 122 2233333322212 45889999999999999998754
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=92.40 E-value=0.34 Score=49.56 Aligned_cols=92 Identities=11% Similarity=0.083 Sum_probs=57.0
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHH------------HHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccce
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIH------------TAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQ 725 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~------------ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~ 725 (1039)
+-||+.++++.|+++|+++.++|.-+.. .+..+.+.+|+.. ..++.+.+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~~---------------- 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHAG---------------- 104 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCCC----------------
Confidence 4599999999999999999999975542 4566778888843 122222110
Q ss_pred EEEecChhh--HHHHHHHHh--hcCCCEEEEEcCCc--------cCHHHhhhCCcce
Q 001638 726 VMARSSPTD--KYILVTQLR--NVFKEVVAVTGNGT--------NDAPALHEADIGL 770 (1039)
Q Consensus 726 v~ar~sP~~--K~~~V~~l~--~~~g~~V~~~GDG~--------ND~~aL~~AdVGI 770 (1039)
..| .|.. =..+.+.+. -. .+.+.|+||.. +|..+-++|++-.
T Consensus 105 -~~~-KP~p~~~~~~~~~~~~~~~-~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 -LYR-KPMTGMWEYLQSQYNSPIK-MTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred -CCC-CCccHHHHHHHHHcCCCCC-chhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 001 2211 112222222 11 25689999986 6999888887654
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=92.31 E-value=0.15 Score=54.10 Aligned_cols=97 Identities=14% Similarity=0.123 Sum_probs=55.5
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHH--HHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChh
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHT--AKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPT 733 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~t--a~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~ 733 (1039)
-++.|++.+.++.|+++|+++.++|...... ........|+...-+.++...+.. ...-.|+
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~----------------~~KP~p~ 156 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEG----------------LRKPDPR 156 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecC----------------CCCCCHH
Confidence 3578999999999999999999999875433 222222334432111111111100 0011122
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcc
Q 001638 734 DKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 734 ~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVG 769 (1039)
-=....+.+.-. .+.++|+||...|..+-++|++-
T Consensus 157 ~~~~~~~~~g~~-~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 157 IYQLMLERLGVA-PEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred HHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHcCCE
Confidence 212222333322 35577889999999999999874
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=92.18 E-value=0.45 Score=50.97 Aligned_cols=97 Identities=13% Similarity=0.167 Sum_probs=62.9
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcC---CCCCCCceeeCcccccCCHHHHHhhcccceEEEecCh
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECG---ILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSP 732 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~G---I~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP 732 (1039)
-++.||+.+++++|+++|+++.++|..+....+.+-+..+ +..- +...+. ..+...-.|
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~-----------------f~~~fd-~~~g~KP~p 155 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY-----------------FSGYFD-TTVGLKTEA 155 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh-----------------cceEEE-eCcccCCCH
Confidence 4689999999999999999999999998887777665542 2110 000111 001111222
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCccee
Q 001638 733 TDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLA 771 (1039)
Q Consensus 733 ~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIa 771 (1039)
+-=..+.+.+.-. .+.++++||...|+.+-++|++-..
T Consensus 156 ~~y~~i~~~lgv~-p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 156 QSYVKIAGQLGSP-PREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred HHHHHHHHHhCcC-hhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 2223333444333 3568999999999999999998543
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=92.01 E-value=0.37 Score=46.95 Aligned_cols=39 Identities=15% Similarity=0.196 Sum_probs=35.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCC-CHHHHHHHHHHcC
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGD-NIHTAKAIAKECG 695 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD-~~~ta~~iA~~~G 695 (1039)
++.||+.+.++.|+++|+++.++|+. ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 7887877777776
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=91.98 E-value=2 Score=49.31 Aligned_cols=47 Identities=21% Similarity=0.209 Sum_probs=37.9
Q ss_pred CCcEeeeeecccC--CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHH
Q 001638 644 NNYTLIAVVGIKD--PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIA 691 (1039)
Q Consensus 644 ~~l~~lG~v~i~D--~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA 691 (1039)
-|.||+-++.-.| .+-++..++|++|. .|+.|.++||+.......+.
T Consensus 118 ~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 118 YDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred cCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 3567766665333 47799999999999 78999999999999999874
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=91.80 E-value=0.27 Score=53.58 Aligned_cols=71 Identities=15% Similarity=0.100 Sum_probs=51.9
Q ss_pred EEEecChhhHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhC--------CcceeecCCCcHHHHhccCEEeecCCch
Q 001638 726 VMARSSPTDKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEA--------DIGLAMGIAGTEVAKENADVIIMDDNFT 794 (1039)
Q Consensus 726 v~ar~sP~~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~A--------dVGIamgi~gt~~ak~~aDivl~dd~f~ 794 (1039)
+-.+..+.+|...++.+.+..+ ..++++||+.||.+|++.+ ..|++|+ .| ..+..|++++. +..
T Consensus 159 ~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~--~~~ 233 (244)
T TIGR00685 159 VELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLT--GPQ 233 (244)
T ss_pred EEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCC--CHH
Confidence 3445567789998888766534 4689999999999999999 4788885 33 24567899886 466
Q ss_pred HHHHHHH
Q 001638 795 TIVTVAR 801 (1039)
Q Consensus 795 ~i~~~i~ 801 (1039)
.+...++
T Consensus 234 ~v~~~L~ 240 (244)
T TIGR00685 234 QVLEFLG 240 (244)
T ss_pred HHHHHHH
Confidence 6665553
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.71 E-value=0.2 Score=53.59 Aligned_cols=95 Identities=12% Similarity=0.132 Sum_probs=62.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCC-CceeeCcccccCCHHHHHhhcccceEEEecChhhH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG-GLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK 735 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~-~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 735 (1039)
++.||+.++++.| ++++.++|+.....+...-+.+|+...- ..++++.+... .+-.|+-=
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~----------------~KP~p~~~ 148 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQR----------------WKPDPALM 148 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCC----------------CCCChHHH
Confidence 3568999999998 4999999999988888888888886532 13333332110 01122222
Q ss_pred HHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCccee
Q 001638 736 YILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLA 771 (1039)
Q Consensus 736 ~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIa 771 (1039)
....+.+.-. .+.++|+||..+|..+-++|++...
T Consensus 149 ~~a~~~~~~~-p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 149 FHAAEAMNVN-VENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred HHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 2223333222 3568899999999999999997664
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=91.34 E-value=0.75 Score=46.92 Aligned_cols=83 Identities=18% Similarity=0.145 Sum_probs=62.2
Q ss_pred cCCCCccHHHHHHHHHHCCC--EEEEECCC-------CHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccce
Q 001638 655 KDPVRPGVREAVETCLAAGI--TVRMVTGD-------NIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQ 725 (1039)
Q Consensus 655 ~D~lR~~v~~aI~~l~~aGi--~v~m~TGD-------~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~ 725 (1039)
++.+-|+..+.+++|++.+. +|.++|-- +...|+++++.+||.-
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpv--------------------------- 109 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPV--------------------------- 109 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcE---------------------------
Confidence 57788999999999999987 49999987 4899999999999852
Q ss_pred E-EEecChhhHHHHHHHHhhc----CCCEEEEEcCCc-cCHHHhh
Q 001638 726 V-MARSSPTDKYILVTQLRNV----FKEVVAVTGNGT-NDAPALH 764 (1039)
Q Consensus 726 v-~ar~sP~~K~~~V~~l~~~----~g~~V~~~GDG~-ND~~aL~ 764 (1039)
+ +....|.-..++.+.++.+ ..+.++|+||-. -|.-+=.
T Consensus 110 l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN 154 (168)
T PF09419_consen 110 LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGN 154 (168)
T ss_pred EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhh
Confidence 2 2234686666777777643 145699999973 3554433
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=90.98 E-value=0.58 Score=53.25 Aligned_cols=91 Identities=9% Similarity=0.061 Sum_probs=68.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH----cCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecCh
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKE----CGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSP 732 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~----~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP 732 (1039)
++.+++.++++.|+++|+++.++|.-+...|..+-+. +|+...- ......+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f-------------------------~~~~~~~ 85 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF-------------------------DARSINW 85 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe-------------------------eEEEEec
Confidence 4578999999999999999999999999999999888 7775311 1112223
Q ss_pred hhHHHHHHHHhhcC---CCEEEEEcCCccCHHHhhhCCcceee
Q 001638 733 TDKYILVTQLRNVF---KEVVAVTGNGTNDAPALHEADIGLAM 772 (1039)
Q Consensus 733 ~~K~~~V~~l~~~~---g~~V~~~GDG~ND~~aL~~AdVGIam 772 (1039)
..|...++.+.+.. ...++|+||...|..+.+.+...+.+
T Consensus 86 ~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 86 GPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred CchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 44555555543332 36788999999999999998887644
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.85 E-value=0.52 Score=49.51 Aligned_cols=94 Identities=12% Similarity=0.068 Sum_probs=56.6
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChh--
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKE-CGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPT-- 733 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~-~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~-- 733 (1039)
++.||+.++++.|+++|+++.++|.-+.......-.. .|+...-+.++...+.. ...|.
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~------------------~~KP~p~ 145 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLG------------------MRKPEAR 145 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccC------------------CCCCCHH
Confidence 4689999999999999999999999876654433222 23322111122111110 11221
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcc
Q 001638 734 DKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 734 ~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVG 769 (1039)
-=....+.+.-. .+.+.++||...|..+-++|++-
T Consensus 146 ~~~~~~~~~~~~-p~~~l~vgD~~~di~aA~~aG~~ 180 (199)
T PRK09456 146 IYQHVLQAEGFS-AADAVFFDDNADNIEAANALGIT 180 (199)
T ss_pred HHHHHHHHcCCC-hhHeEEeCCCHHHHHHHHHcCCE
Confidence 112223333322 35688999999999999988874
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=89.96 E-value=2.1 Score=46.67 Aligned_cols=33 Identities=18% Similarity=0.298 Sum_probs=28.3
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHH
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKA 689 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~ 689 (1039)
.++.+...++|++|++. ++++++||+.......
T Consensus 23 ~~i~~~~~~ai~~l~~~-i~fviaTGR~~~~~~~ 55 (245)
T PLN02423 23 KEATPEMLEFMKELRKV-VTVGVVGGSDLSKISE 55 (245)
T ss_pred CcCCHHHHHHHHHHHhC-CEEEEECCcCHHHHHH
Confidence 35788999999999987 9999999998776644
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=89.89 E-value=0.73 Score=52.19 Aligned_cols=48 Identities=19% Similarity=0.265 Sum_probs=38.2
Q ss_pred eecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHH---HHcCCCC
Q 001638 651 VVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIA---KECGILT 698 (1039)
Q Consensus 651 ~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA---~~~GI~~ 698 (1039)
++.-.+.+=|++.++++.|++.|++++++|+....+...++ +++|+..
T Consensus 38 tl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~ 88 (311)
T PLN02645 38 VIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNV 88 (311)
T ss_pred CeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 33334556699999999999999999999999977766666 5678754
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=89.76 E-value=1.2 Score=44.83 Aligned_cols=106 Identities=21% Similarity=0.265 Sum_probs=70.9
Q ss_pred eecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHH---HHc-----CCCCCCCceeeCcc--cccCCHHHHHhh
Q 001638 651 VVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIA---KEC-----GILTDGGLAIEGTD--FRSKNPQEMQEL 720 (1039)
Q Consensus 651 ~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA---~~~-----GI~~~~~~vi~G~~--~~~~~~~~~~~~ 720 (1039)
++|- |-.++++.+.++.+++.|+++..+|+++.--+...- .+. ++. .+.++.-++ +..+..
T Consensus 22 ~~G~-d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP--~Gpv~~sP~~l~~al~r------ 92 (157)
T PF08235_consen 22 ILGK-DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLP--DGPVLLSPDSLFSALHR------ 92 (157)
T ss_pred ccCc-hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCC--CCCEEECCcchhhhhhc------
Confidence 3443 789999999999999999999999999976654432 222 332 222222211 100110
Q ss_pred cccceEEEecChhhHHHHHHHHhhc----CCCEEEEEcCCccCHHHhhhCCcc
Q 001638 721 IPKLQVMARSSPTDKYILVTQLRNV----FKEVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 721 ~~~~~v~ar~sP~~K~~~V~~l~~~----~g~~V~~~GDG~ND~~aL~~AdVG 769 (1039)
.+..+-.-+.|...++.++.. ....++..|...+|+.+-++++|-
T Consensus 93 ----Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 ----EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ----cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 145555567898889888865 246788889999999999877654
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.63 E-value=0.64 Score=48.57 Aligned_cols=121 Identities=18% Similarity=0.225 Sum_probs=71.7
Q ss_pred CCCccHHHHHHHHHHCCC-EEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcc--cceEEEecCh-
Q 001638 657 PVRPGVREAVETCLAAGI-TVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIP--KLQVMARSSP- 732 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi-~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~--~~~v~ar~sP- 732 (1039)
|.-|+..++|+.+++.|- .++++|--|.--...+-+..||..--..+.+.+..-+.+.. + .+.+ .-.-+.+|-|
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~-L-~v~pyH~~hsC~~CPsN 161 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGR-L-LVRPYHTQHSCNLCPSN 161 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCc-E-EeecCCCCCccCcCchh
Confidence 678999999999999996 99999999998888888888875411011111100000000 0 0000 0012233322
Q ss_pred hhHHHHHHHHhhcC------CCEEEEEcCCccCH-HHhhhCCcceeecCCCcHH
Q 001638 733 TDKYILVTQLRNVF------KEVVAVTGNGTNDA-PALHEADIGLAMGIAGTEV 779 (1039)
Q Consensus 733 ~~K~~~V~~l~~~~------g~~V~~~GDG~ND~-~aL~~AdVGIamgi~gt~~ 779 (1039)
.-|..++..++... -+.+..+|||.||. |+++...--+||--.|-+.
T Consensus 162 mCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 162 MCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPL 215 (256)
T ss_pred hhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCch
Confidence 24666666654320 13788999999995 5666666666776555554
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=88.58 E-value=0.89 Score=47.00 Aligned_cols=92 Identities=10% Similarity=-0.030 Sum_probs=62.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEe---cChh
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMAR---SSPT 733 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar---~sP~ 733 (1039)
++.+++.++++.|+ .++.++|.-+...+..+.+.+|+...-+.++.+.+.. .+ ..|.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~-----------------~~~~~~KP~ 143 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTAN-----------------PDYLLPKPS 143 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeeccc-----------------CccCCCCCC
Confidence 36789999999998 4789999999999999999999865323333332211 11 1332
Q ss_pred --hHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcc
Q 001638 734 --DKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 734 --~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVG 769 (1039)
-=...++.+... .+.++|+||...|..+-++|++-
T Consensus 144 p~~~~~~~~~~~~~-~~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 144 PQAYEKALREAGVD-PERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred HHHHHHHHHHhCCC-ccceEEEeCCHHHHHHHHHcCCE
Confidence 222333334333 45688999999999998888764
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.03 E-value=0.97 Score=46.76 Aligned_cols=92 Identities=14% Similarity=0.100 Sum_probs=60.8
Q ss_pred CccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHH
Q 001638 659 RPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYIL 738 (1039)
Q Consensus 659 R~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~ 738 (1039)
-|+ .+.++.+++. ++..++|+.....+..+-+..|+...-+.++...+... .+-.|+-=...
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~----------------~KP~p~~~~~~ 151 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQH----------------HKPAPDTFLRC 151 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccC----------------CCCChHHHHHH
Confidence 454 5889999875 89999999999999999999998653334444333210 11122222223
Q ss_pred HHHHhhcCCCEEEEEcCCccCHHHhhhCCcc
Q 001638 739 VTQLRNVFKEVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 739 V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVG 769 (1039)
.+.+.-. ...+.++||..+|+.+-++|++-
T Consensus 152 ~~~~~~~-~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 152 AQLMGVQ-PTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHcCCC-HHHeEEEeccHhhHHHHHHCCCE
Confidence 3333322 24577889999999999999874
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=87.33 E-value=7.3 Score=46.94 Aligned_cols=98 Identities=13% Similarity=0.024 Sum_probs=62.1
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCCCCceeeCcccccCCHHHHHhhcccceEEEe------c
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKE-CGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMAR------S 730 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~-~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar------~ 730 (1039)
+++++.+. ++++|.+ +++|+-...-++.+|++ +|++. + -|.+++... +-..-++ |
T Consensus 111 l~~~a~~~---~~~~g~~-vvVSASp~~~Vepfa~~~LGid~----V-IgTeLev~~---------~G~~TG~i~g~~~c 172 (497)
T PLN02177 111 VHPETWRV---FNSFGKR-YIITASPRIMVEPFVKTFLGADK----V-LGTELEVSK---------SGRATGFMKKPGVL 172 (497)
T ss_pred cCHHHHHH---HHhCCCE-EEEECCcHHHHHHHHHHcCCCCE----E-EecccEECc---------CCEEeeeecCCCCC
Confidence 56665554 4567754 99999999999999988 89874 1 111111000 0001111 3
Q ss_pred ChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecC
Q 001638 731 SPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGI 774 (1039)
Q Consensus 731 sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi 774 (1039)
.-++|.+-++......-.. .+-||+.||.|||+.||-+.+++.
T Consensus 173 ~Ge~Kv~rl~~~~g~~~~~-~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 173 VGDHKRDAVLKEFGDALPD-LGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred ccHHHHHHHHHHhCCCCce-EEEECCccHHHHHHhCCccEEeCC
Confidence 4466887776433210123 456999999999999999999984
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.77 E-value=3 Score=43.34 Aligned_cols=52 Identities=21% Similarity=0.335 Sum_probs=44.0
Q ss_pred EeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH---cCCCC
Q 001638 647 TLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKE---CGILT 698 (1039)
Q Consensus 647 ~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~---~GI~~ 698 (1039)
.+-|.+.++|..-|++.||++.|+.++.+|+.+|.-..+.-+.+.++ ||+.-
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v 67 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDV 67 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCc
Confidence 45699999999999999999999999999999998877776666654 67653
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=86.09 E-value=1.8 Score=45.21 Aligned_cols=93 Identities=12% Similarity=0.062 Sum_probs=55.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.||+.++++.|++.+ +..++|.-+..+....-+.+|+..-.. ..+ ...+.++... .|.
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~-----------------~~f-~~i~~~~~~~-~kp 133 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFP-----------------GAF-SEVLMCGHDE-SKE 133 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCC-----------------Ccc-cEEEEeccCc-ccH
Confidence 36899999999999985 566667655444444555666642100 000 0002222222 133
Q ss_pred HHHHHHhhcCC-CEEEEEcCCccCHHHhhhC--Ccc
Q 001638 737 ILVTQLRNVFK-EVVAVTGNGTNDAPALHEA--DIG 769 (1039)
Q Consensus 737 ~~V~~l~~~~g-~~V~~~GDG~ND~~aL~~A--dVG 769 (1039)
.++....++.| +.++++||..+|..+-++| ++-
T Consensus 134 ~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~ 169 (197)
T PHA02597 134 KLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLP 169 (197)
T ss_pred HHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCc
Confidence 44443333324 4578999999999999999 884
|
2 hypothetical protein; Provisional |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.69 E-value=1.5 Score=47.05 Aligned_cols=98 Identities=18% Similarity=0.221 Sum_probs=74.4
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhH
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK 735 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 735 (1039)
.++.||+.+.++.|++.|+.+.+.|+-....+..+.+..|+...-..++++.+... ..-.|+-=
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~----------------~KP~Pd~y 148 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVAR----------------GKPAPDIY 148 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhc----------------CCCCCHHH
Confidence 46799999999999999999999999999999999999999876555555554321 12334444
Q ss_pred HHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcce
Q 001638 736 YILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGL 770 (1039)
Q Consensus 736 ~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGI 770 (1039)
+.-.+.|.-. ...+.++.|..|.+.|-++|+.-+
T Consensus 149 L~Aa~~Lgv~-P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 149 LLAAERLGVD-PEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred HHHHHHcCCC-hHHeEEEecchhHHHHHHHCCCEE
Confidence 4445554333 456778899999999999998643
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=84.91 E-value=1.9 Score=47.70 Aligned_cols=53 Identities=9% Similarity=0.106 Sum_probs=45.4
Q ss_pred CC-ccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccc
Q 001638 658 VR-PGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFR 710 (1039)
Q Consensus 658 lR-~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~ 710 (1039)
+| |++.+++++|+++|+++.++|+-....+...-+++|+...-+.++.+.+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~ 199 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKA 199 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccc
Confidence 67 999999999999999999999999999999999999986545566555543
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=83.71 E-value=11 Score=42.04 Aligned_cols=46 Identities=20% Similarity=0.226 Sum_probs=34.5
Q ss_pred cccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHH---HHHHHcCCCC
Q 001638 653 GIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAK---AIAKECGILT 698 (1039)
Q Consensus 653 ~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~---~iA~~~GI~~ 698 (1039)
.-.+.+=|++.+++++|++.|++++++|+....+.. .--+++|+..
T Consensus 14 ~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~ 62 (279)
T TIGR01452 14 WLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG 62 (279)
T ss_pred EcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 335667789999999999999999999996543332 3335678754
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=83.45 E-value=2.6 Score=46.07 Aligned_cols=48 Identities=21% Similarity=0.322 Sum_probs=40.8
Q ss_pred eeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHc---CCC
Q 001638 650 AVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKEC---GIL 697 (1039)
Q Consensus 650 G~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~---GI~ 697 (1039)
|++.-.+.+-|++.++++.|+++|++++++|+....+...+++++ |+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 455556778899999999999999999999999998888887774 664
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=83.26 E-value=1.8 Score=46.71 Aligned_cols=90 Identities=18% Similarity=0.175 Sum_probs=58.7
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHH---HHHHHHHHcCCCCCCCceeeCccc-ccCCHHHHHhhcccceEEEecC
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIH---TAKAIAKECGILTDGGLAIEGTDF-RSKNPQEMQELIPKLQVMARSS 731 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~---ta~~iA~~~GI~~~~~~vi~G~~~-~~~~~~~~~~~~~~~~v~ar~s 731 (1039)
+|.=|++.+.++.+++.|++|..+||++.. .+..=-++.|+.....+++.+..- .. ...
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~-----------------~~~ 176 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSK-----------------KSA 176 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS--------------------
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhcccccccccc-----------------ccc
Confidence 355688999999999999999999998744 333334566765433443333221 00 001
Q ss_pred hhhHHHHHHHHhhcCCCEEEEEcCCccCHHH
Q 001638 732 PTDKYILVTQLRNVFKEVVAVTGNGTNDAPA 762 (1039)
Q Consensus 732 P~~K~~~V~~l~~~~g~~V~~~GDG~ND~~a 762 (1039)
.+.|...-+.+++..-++++.+||..+|...
T Consensus 177 ~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 177 VEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ---SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred cccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 2347777777777623789999999999865
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=80.51 E-value=3.7 Score=45.55 Aligned_cols=52 Identities=17% Similarity=0.105 Sum_probs=43.0
Q ss_pred CC-ccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCccc
Q 001638 658 VR-PGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDF 709 (1039)
Q Consensus 658 lR-~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~ 709 (1039)
+| |++.+++++|+++|+++.++|+.+...+..+.+.+|+...-..++.+.+.
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i 200 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRK 200 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCc
Confidence 46 89999999999999999999988888889999999997644445544443
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1039 | ||||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 1e-79 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 4e-79 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 4e-79 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 3e-78 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 2e-72 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 9e-71 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 6e-70 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 2e-66 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 1e-38 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 8e-37 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 3e-15 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 3e-15 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 1e-14 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 1e-14 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 1e-14 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 1e-13 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 1e-13 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 1e-12 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 4e-07 | ||
| 2hc8_A | 113 | Structure Of The A. Fulgidus Copa A-Domain Length = | 8e-05 | ||
| 3gwi_A | 170 | Crystal Structure Of Mg-Atpase Nucleotide Binding D | 1e-04 |
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
| >pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113 | Back alignment and structure |
|
| >pdb|3GWI|A Chain A, Crystal Structure Of Mg-Atpase Nucleotide Binding Domain Length = 170 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1039 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 0.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 0.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 0.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 0.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 1e-173 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 8e-31 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 1e-30 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 8e-30 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 5e-28 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 6e-13 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 5e-28 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-12 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 6e-28 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 6e-13 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 3e-27 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-11 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 2e-10 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 3e-07 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 9e-07 | |
| 2l1w_B | 26 | Vacuolar calcium ATPase BCA1 peptide; calmodulin, | 2e-04 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 8e-04 | |
| 3lvg_D | 190 | LCB, clathrin light chain B; SELF assembly, coated | 8e-04 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 658 bits (1701), Expect = 0.0
Identities = 238/989 (24%), Positives = 401/989 (40%), Gaps = 123/989 (12%)
Query: 120 VEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMIC 179
V L ++ S G+++ + G N ++ L ++ +
Sbjct: 58 VAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVA 117
Query: 180 AAVSI---GVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEK---- 232
AA+ + + L + ++ VV+VT Y Q +FK+
Sbjct: 118 AAICLIAFAIQASEGDLTTDDNLYLALA--LIAVVVVTGCFGYYQ--EFKS---TNIIAS 170
Query: 233 -KNLI---VQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSG 288
KNL+ V RDG + +++ LVVGD+V + GD+VPAD ++ +D SSL+G
Sbjct: 171 FKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGRKVDNSSLTG 230
Query: 289 ETEPVH----INRDRPF-----LLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGED 339
E+EP + P T +G+ + LV + G RT GR+ S +
Sbjct: 231 ESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENE 290
Query: 340 ETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFA 399
+TP+ +++ +I + ++F F+V L
Sbjct: 291 KTPIAIEIEHFVDIIAGLAILFGATFFIVAMCI------------------GYTFLRAMV 332
Query: 400 IAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLT 459
+ IVV VPEGL VT+ L+ K+L + +V++L A ET+GS S IC+DKTGTLT
Sbjct: 333 FFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLT 392
Query: 460 TNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKD---- 515
N M V+ LW N + + +++ S + + + + +D
Sbjct: 393 QNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPV 452
Query: 516 GRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPN--NGG 573
+ ++G +E A+L+F + G++ +RE V PFNS K + +L + +
Sbjct: 453 PKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPR 512
Query: 574 FRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIK 633
+ KGA E +L C I+ G+ +P+ E+ R+ R L +
Sbjct: 513 HVLVMKGAPERVLERCSSILI-KGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLS 571
Query: 634 GNHKAES---------IPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNI 684
P + + +V + DP R V +AV C AGI V MVTGD+
Sbjct: 572 EKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHP 631
Query: 685 HTAKAIAKECGILTDGG------------------------LAIEGTDFRSKNPQEMQEL 720
TAKAIA GI+++G I G + +P E+ E
Sbjct: 632 ITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEA 691
Query: 721 IPKLQ--VMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTE 778
+ V AR+SP K ++V + +VAVTG+G ND+PAL +ADIG+AMGIAG++
Sbjct: 692 LRTHPEMVFARTSPQQKLVIVESCQR-LGAIVAVTGDGVNDSPALKKADIGVAMGIAGSD 750
Query: 779 VAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSA 838
AK AD+I++DDNF +IVT GR ++ N++K + + LT NI L + ++
Sbjct: 751 AAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPL 810
Query: 839 PLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPP--IGRNVHFITVTMWRNIIGQSIY 896
PL + +L++ + D +++LA E +M P R+ +
Sbjct: 811 PLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAI 870
Query: 897 Q-IIVLG----VLTFCGKKILKLSGPNATLILN--------------------------T 925
Q + G L G + T
Sbjct: 871 QSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCYT 930
Query: 926 FIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVFIAVLVATVGFQVIIVEL--LGTFAT 983
F S CQ+ + + + +G F + + + +V V + +
Sbjct: 931 VFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMPNIFN 990
Query: 984 TVPLNWKLWLASVVIGAISMPFGVLLKCI 1012
+P+ ++ WL + G + + + K
Sbjct: 991 FMPIRFQWWLVPMPFGLLIFVYDEIRKLG 1019
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 658 bits (1700), Expect = 0.0
Identities = 243/991 (24%), Positives = 403/991 (40%), Gaps = 128/991 (12%)
Query: 120 VEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMIC 179
++ L + L G+ + G N P W+ L I+L I
Sbjct: 53 LDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIG 112
Query: 180 AAVSI---GVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEK---- 232
A + G+ TE P LG+V + VVIVT Y Q + K+ +
Sbjct: 113 AILCFLAYGIQAATEDEPANDNLYLGVV--LSTVVIVTGCFSYYQ--EAKS---SRIMDS 165
Query: 233 -KNLI---VQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSG 288
KN++ V RDG + ++ +V GD+V + GD++PAD +IS + +D SSL+G
Sbjct: 166 FKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGCKVDNSSLTG 225
Query: 289 ETEPVH----INRDRPF-----LLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGED 339
E+EP + + P T +G+ + +V G RT GR+ S
Sbjct: 226 ESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVG 285
Query: 340 ETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFA 399
TP+ +++ +I + + V F++ + L
Sbjct: 286 RTPIAIEIEHFIHIITGVAVFLGVSFFILSLIL------------------GYSWLEAVI 327
Query: 400 IAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLT 459
+ I+V VPEGL VT+ L K++ LV++L A ET+GS S IC+DKTGTLT
Sbjct: 328 FLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLT 387
Query: 460 TNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDG--- 516
N M V +W N+ + +N+ + A ++ + + +D
Sbjct: 388 QNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNVPI 447
Query: 517 -RTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPN--NGG 573
+ ++ G +E A+L+ + G R+ + + PFNS K +
Sbjct: 448 LKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESR 507
Query: 574 FRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIK 633
+ + KGA E IL+ C I+ +G P+ E+ ++ N R L +
Sbjct: 508 YLLVMKGAPERILDRCSTIL-LNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALP 566
Query: 634 GNHKAESI---------PENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNI 684
+ E P + + ++ + DP R V +AV C +AGI V MVTGD+
Sbjct: 567 EDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHP 626
Query: 685 HTAKAIAKECGILTDGG------------------------LAIEGTDFRSKNPQEMQEL 720
TAKAIAK GI+++G + G+D + + + + ++
Sbjct: 627 ITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDI 686
Query: 721 IPKLQ--VMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTE 778
+ V AR+SP K I+V + +VAVTG+G ND+PAL +ADIG+AMGI+G++
Sbjct: 687 LHYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGISGSD 745
Query: 779 VAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSA 838
V+K+ AD+I++DDNF +IVT GR ++ N++K + + LT NI + V
Sbjct: 746 VSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPL 805
Query: 839 PLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNV---HFITVTMWRNIIGQSI 895
PL V +L +++ D + A++LA E +M+R P RN + + GQ
Sbjct: 806 PLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQP--RNPKTDKLVNERLISMAYGQIG 863
Query: 896 YQIIVLGVLTF------CGKKILKLSGPNATLILN------------------------- 924
+ G ++ G + L G
Sbjct: 864 MIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTC 923
Query: 925 -TFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVFIAVLVATVGFQVIIVEL--LGTF 981
T F S V Q + I + + ++F+ + + I L +
Sbjct: 924 HTSFFISIVVVQWADLIICKT-RRNSIFQQGMKNKILIFGLFEETALAAFLSYCPGTDVA 982
Query: 982 ATTVPLNWKLWLASVVIGAISMPFGVLLKCI 1012
PL W + I + + + I
Sbjct: 983 LRMYPLKPSWWFCAFPYSLIIFLYDEMRRFI 1013
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 646 bits (1668), Expect = 0.0
Identities = 263/997 (26%), Positives = 435/997 (43%), Gaps = 122/997 (12%)
Query: 120 VEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMIC 179
E VS G+ ++V YG N + +S W V E DL + IL++
Sbjct: 10 TEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLA 69
Query: 180 AAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEK-----KN 234
A +S + EG V ILL++I A+ Q + A E K
Sbjct: 70 ACISFVLAWFEEGEETITAFVEPFV--ILLILIANAIVGVWQ--ERNA---ENAIEALKE 122
Query: 235 LI---VQVTRDGYRKKLSI--YDLVVGDIVHLSIGDQVPADG--ILISGYSLTIDESSLS 287
+V R + I D+V GDIV +++GD+VPAD + I +L +D+S L+
Sbjct: 123 YEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILT 182
Query: 288 GETEPVH-----------INRDRPFLL-SGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSE 335
GE+ V +N+D+ +L SGT + G +V + G+ TE G++ ++
Sbjct: 183 GESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAA 242
Query: 336 GGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLL 395
+D+TPLQ KL+ + K+ + V +L+ F I+ +
Sbjct: 243 TEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIR--------GAI 294
Query: 396 NYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKT 455
YF IAV + V A+PEGLP +T LA +++ A+VR L + ET+G S IC+DKT
Sbjct: 295 YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKT 354
Query: 456 GTLTTNHMVVTKLWICNEAKTIKSG------------------DNEKLLKPSVSDAVFNI 497
GTLTTN M V K++I ++ N+K ++ D + +
Sbjct: 355 GTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVEL 414
Query: 498 FLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVE---- 553
N S + G +G TE A+ + +T R S + +
Sbjct: 415 ATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNS 474
Query: 554 ------------PFNSVKKRMSVLVSLPNN----GGFRVFCKGASEIILNMCDKIINADG 597
F+ +K MSV S + G ++F KGA E +++ C+ +
Sbjct: 475 VIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVR-VGT 533
Query: 598 KAVPISEEQRKNLTNVINGFSS--EALRTLCLAFQDIKGNHKAESIP--------ENNYT 647
VP++ ++ + +VI + + + LR L LA +D + + E + T
Sbjct: 534 TRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLT 593
Query: 648 LIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG----GLA 703
+ VVG+ DP R V +++ C AGI V M+TGDN TA AI + GI + A
Sbjct: 594 FVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRA 653
Query: 704 IEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPAL 763
G +F E +E + AR P+ K +V L++ + E+ A+TG+G NDAPAL
Sbjct: 654 YTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQS-YDEITAMTGDGVNDAPAL 712
Query: 764 HEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIV 823
+A+IG+AMG +GT VAK +++++ DDNF+TIV GR++Y N+++F+++ ++ N+
Sbjct: 713 KKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVG 771
Query: 824 ALVINFVAACITGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFIT 883
+V F+ A + L VQLLWVN++ D L A AL PP +M RPP I+
Sbjct: 772 EVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLIS 831
Query: 884 VTMWRNIIGQSIYQ-IIVLGVLTF---------------------CGKKILKLSGPNATL 921
++ + Y +G + C + G + +
Sbjct: 832 GWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEI 891
Query: 922 ILN----TFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVFIAVLVATVGFQVIIVEL 977
T + V ++ N +NS + + + + + + ++ +I+ +
Sbjct: 892 FEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYV 951
Query: 978 --LGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCI 1012
L L+ WL + I + +LK I
Sbjct: 952 DPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFI 988
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 550 bits (1420), Expect = 0.0
Identities = 175/890 (19%), Positives = 356/890 (40%), Gaps = 88/890 (9%)
Query: 132 PDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPTE 191
+G+ ++E +R ++G N+ EK F + + ++ + A ++I +
Sbjct: 30 REGLTTQEGEDRIQIFGPNKLEEKKESKLLKF-LGFMWNPLSWVMEMAAIMAIALANGDG 88
Query: 192 GWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNL--IVQVTRDGYRKKLS 249
PD D +GI+ +++ ++ + + A L +V RDG +
Sbjct: 89 RPPD-WQDFVGIICLLVINSTISFIEENNAG---NAAAALMAGLAPKTKVLRDGKWSEQE 144
Query: 250 IYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDRPFLLSGTKVQ 309
LV GDIV + +GD +PAD L+ G L +D+S+L+GE+ PV + + + SG+ +
Sbjct: 145 AAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKHPGQ-EVFSGSTCK 203
Query: 310 DGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATV-IGKIGLVFAVLTFLV 368
G + +V + G+ T +G+ L + Q L + I I + + ++
Sbjct: 204 QGEIEAVVIATGVHTFFGK-AAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVM 262
Query: 369 LALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKL 428
++ K + + +++ +P +P +++++A +L
Sbjct: 263 YPIQ------------------RRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 304
Query: 429 MNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKP 488
A+ + ++A E M +C+DKTGTLT N + V K + K + + +++L
Sbjct: 305 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGV---EKDQVLLF 361
Query: 489 SVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESA 548
+ + S +N +D + A++ D R
Sbjct: 362 A--------AMASRVEN------QD----------AIDAAMVGM----LADPKEARAGIR 393
Query: 549 IVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRK 608
V PFN V KR ++ +G + KGA E IL + S + K
Sbjct: 394 EVHFLPFNPVDKRTALTYIDG-SGNWHRVSKGAPEQILELA-----------KASNDLSK 441
Query: 609 NLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVET 668
+ ++I+ ++ LR+L +A Q + K P + + ++ + DP R E +
Sbjct: 442 KVLSIIDKYAERGLRSLAVARQVVPEKTKES--PGAPWEFVGLLPLFDPPRHDSAETIRR 499
Query: 669 CLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLA---IEGTDFRSKNPQEMQELIPKLQ 725
L G+ V+M+TGD + K + G+ T+ + + + ++ELI K
Sbjct: 500 ALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKAD 559
Query: 726 VMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENAD 785
A P KY +V +L+ K +V +TG+G NDAPAL +ADIG+A+ T+ A+ +D
Sbjct: 560 GFAGVFPEHKYEIVKKLQER-KHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASD 617
Query: 786 VIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAVQL 845
+++ + + I++ R+++ ++ + + +++ I +V F+ + +A +
Sbjct: 618 IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI-RIVFGFMLIALIWEFDFSAFMV 676
Query: 846 LWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIVLGVL- 904
L + ++ D + ++ + P + + +I +I
Sbjct: 677 LIIAILND-GTIMTISKDRVKP--SPTPDSWKLKEIFATGVVLGGYQ-AIMTVIFFWAAH 732
Query: 905 --TFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVFIA 962
F S + L ++ +R + F + + IA
Sbjct: 733 KTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTR--SRSWSFVERPGALLMIA 790
Query: 963 VLVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCI 1012
L+A + +I V FA + W + ++ + K
Sbjct: 791 FLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFA 840
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 529 bits (1366), Expect = e-173
Identities = 177/894 (19%), Positives = 356/894 (39%), Gaps = 108/894 (12%)
Query: 129 VSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGI 188
G+ SEEV R+ YG N+ E+ F F ++ A ++ G+
Sbjct: 82 TDTRVGLTSEEVVQRRRKYGLNQMKEEKENHFLKF-LGFFVGPIQFVMEGAAVLAAGLE- 139
Query: 189 PTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQ--VTRDGYRK 246
W D I +LL +V V +++ +D+ KK L ++ V RDG K
Sbjct: 140 ---DWVDFG----VICGLLLLNAVVGFVQEFQAG---SIVDELKKTLALKAVVLRDGTLK 189
Query: 247 KLSIYDLVVGDIVHLSIGDQVPADGILISGYS-LTIDESSLSGETEPVHINRDRPFLLSG 305
++ ++V GDI+ + G +PADG +++ + L +D+S+L+GE+ V ++ + +
Sbjct: 190 EIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTGESLAVDKHKG-DQVFAS 248
Query: 306 TKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLT 365
+ V+ G +++T+ G T GR ++ LNG+ T++ + + ++
Sbjct: 249 SAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIV 308
Query: 366 FLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAM 425
++ R + ++ + I ++ VP GLP VT ++A
Sbjct: 309 WVSSFYR------------------SNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGA 350
Query: 426 KKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKL 485
L KA+V+ LSA E++ +C+DKTGTLT N + + + D E L
Sbjct: 351 AYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGV------DPEDL 404
Query: 486 LKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHRE 545
+ + L + + K D ++A L+ L +
Sbjct: 405 MLTA--------CLAASRKK------KGID--------AIDKAFLKS-LKYYPRAKSVLS 441
Query: 546 ESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEE 605
+ +++ PF+ V K++ +V P G KGA +L ++ PI EE
Sbjct: 442 KYKVLQFHPFDPVSKKVVAVVESP-QGERITCVKGAPLFVLKTVEED-------HPIPEE 493
Query: 606 QRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREA 665
+ N + F++ R+L +A + E ++ ++ ++ DP R +
Sbjct: 494 VDQAYKNKVAEFATRGFRSLGVARKRG----------EGSWEILGIMPCMDPPRHDTYKT 543
Query: 666 VETCLAAGITVRMVTGDNIHTAKAIAKECGILTD--GGLAIEGTDFRSKNPQEMQELIPK 723
V G++++M+TGD + A+ +++ G+ T+ + E+ + +
Sbjct: 544 VCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEA 603
Query: 724 LQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKEN 783
A P KY +V L+ +VA+TG+G NDAP+L +AD G+A+ ++ A+
Sbjct: 604 ADGFAEVFPQHKYNVVEILQQR-GYLVAMTGDGVNDAPSLKKADTGIAVE-GSSDAARSA 661
Query: 784 ADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAV 843
AD++ + I+ + R ++ + +V +++ ++I L I + L
Sbjct: 662 ADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSI-HLEIFLGLWIAILNRSLNIE 720
Query: 844 QLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIVLGV 903
++++ + D + LA+A + N+ + + +VL V
Sbjct: 721 LVVFIAIFAD-VATLAIAYDNAPYSQTPVKW---NLPKLWGMS--------VLLGVVLAV 768
Query: 904 LTFCGKKILKLSGPNATLILN-----TFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSW 958
T+ + G N ++ N +F + + +R + I S
Sbjct: 769 GTWITVTTMYAQGENGGIVQNFGNMDEVLFLQISLTENWLIFITR--ANGPFWSSIPSWQ 826
Query: 959 VFIAVLVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCI 1012
+ A+ + + + G F + + + + + I
Sbjct: 827 LSGAIFLVDIL--ATCFTIWGWFEHS-DTSIVAVVRIWIFSFGIFCIMGGVYYI 877
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 8e-31
Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 30/163 (18%)
Query: 648 LIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGT 707
+ V+ + D +RP REA+ A GI M+TGDN AK +A+E G+
Sbjct: 135 VSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGL----------- 183
Query: 708 DFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEAD 767
D A P +K V +++ K V A+ G+G NDAPAL +AD
Sbjct: 184 D----------------DYFAEVLPHEKAEKVKEVQQ--KYVTAMVGDGVNDAPALAQAD 225
Query: 768 IGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINI 810
+G+A+G AGT+VA E AD++++ ++ + + R Y
Sbjct: 226 VGIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKF 267
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 1e-30
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 29/163 (17%)
Query: 648 LIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGT 707
IA I D RP +++ +E G+ + +++GD K ++KE I
Sbjct: 127 PIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNI----------- 175
Query: 708 DFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEAD 767
+ + SP DK ++ +L+ V + G+G NDA AL AD
Sbjct: 176 Q----------------EYYSNLSPEDKVRIIEKLKQNGN-KVLMIGDGVNDAAALALAD 218
Query: 768 IGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINI 810
+ +AMG G +++K AD+I++ ++ T++ + + + + I
Sbjct: 219 VSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAI 260
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 8e-30
Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 30/163 (18%)
Query: 648 LIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGT 707
+ ++ + D ++ + AV+ GI V M+TGDN +A+AI++E +
Sbjct: 154 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL----------- 202
Query: 708 DFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEAD 767
D V+A P K V +L+ KEVVA G+G NDAPAL +AD
Sbjct: 203 D----------------LVIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQAD 244
Query: 768 IGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINI 810
+G+A+G +G++VA E+ D++++ D+ +V + R I
Sbjct: 245 LGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 286
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 5e-28
Identities = 52/163 (31%), Positives = 83/163 (50%), Gaps = 29/163 (17%)
Query: 648 LIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGT 707
+A++ ++DP++ E + +GI + M+TGD+ TA+A+A GI
Sbjct: 545 TVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGI--K-------- 594
Query: 708 DFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEAD 767
+V+A P DK +V++L++ +VA+ G+G NDAPAL +AD
Sbjct: 595 -----------------KVVAEIMPEDKSRIVSELKDKGL-IVAMAGDGVNDAPALAKAD 636
Query: 768 IGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINI 810
IG+AMG GT+VA E+A V ++ + I R S NI
Sbjct: 637 IGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNI 678
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 72.2 bits (178), Expect = 6e-13
Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 34/238 (14%)
Query: 239 VTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRD 298
+ DG +++S+ ++ VGD++ + G+++P DG + G S +DES ++GE PV
Sbjct: 230 IKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRS-FVDESMVTGEPIPVAKEAS 288
Query: 299 RPFLLSGTKVQDGSGKMLVTSVGMRTEWGRL--MVTLSEGGEDETPLQ-----VKLNGVA 351
++ T Q GS M VG T R+ MV+ ++ P+Q V V
Sbjct: 289 AK-VIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRS--RAPIQRLADTVSGWFVP 345
Query: 352 TVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNY-FAIAVTIVVVAVP 410
VI AVL+F+V W+ + L+Y AV+++++A P
Sbjct: 346 AVIL-----VAVLSFIV-----------------WALLGPQPALSYGLIAAVSVLIIACP 383
Query: 411 EGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKL 468
L LA +S+ + K L+++ A E M + + DKTGTLT H +T++
Sbjct: 384 CALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRI 441
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 119 bits (302), Expect = 5e-28
Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 30/163 (18%)
Query: 648 LIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGT 707
+ ++ + D ++ + AV+ GI V M+TGDN +A+AI++E +
Sbjct: 448 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL----------- 496
Query: 708 DFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEAD 767
D V+A P K V +L+ KEVVA G+G NDAPAL +AD
Sbjct: 497 D----------------LVIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQAD 538
Query: 768 IGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINI 810
+G+A+G +G++VA E+ D++++ D+ +V + R I
Sbjct: 539 LGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 580
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 70.2 bits (173), Expect = 2e-12
Identities = 70/256 (27%), Positives = 108/256 (42%), Gaps = 40/256 (15%)
Query: 239 VTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRD 298
V RDG + + ++ VGDIV + G+++P DG+++ G S +DES +SGE PV ++
Sbjct: 137 VIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKG 195
Query: 299 RPFLLSGTKVQDGSGKMLVTSVGMRTEWGRL--MVTLSEGGEDETPLQ-----VKLNGVA 351
+ T G K+ T VG T ++ +V + + P+Q V +
Sbjct: 196 DE-VFGATINNTGVLKIRATRVGGETLLAQIVKLV--EDAMGSKPPIQRLADKVVAYFIP 252
Query: 352 TVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPE 411
TV+ A+ F+ W I LL F + ++VVA P
Sbjct: 253 TVLL-----VAISAFIY-----------------WYFIAHAPLLFAFTTLIAVLVVACPC 290
Query: 412 GLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWIC 471
LA +L M K L+++ A E + + DKTGTLT VT L
Sbjct: 291 AFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPL 350
Query: 472 NEAKTIKSGDNEKLLK 487
N GD +LL+
Sbjct: 351 N-------GDERELLR 359
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 6e-28
Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 30/163 (18%)
Query: 648 LIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGT 707
+ ++ + D ++ + AV+ GI V M+TGDN +A+AI++E +
Sbjct: 526 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL----------- 574
Query: 708 DFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEAD 767
D V+A P K V +L+ KEVVA G+G NDAPAL +AD
Sbjct: 575 D----------------LVIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQAD 616
Query: 768 IGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINI 810
+G+A+G +G++VA E+ D++++ D+ +V + R I
Sbjct: 617 LGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 658
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 72.2 bits (178), Expect = 6e-13
Identities = 71/258 (27%), Positives = 109/258 (42%), Gaps = 40/258 (15%)
Query: 237 VQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHIN 296
V RDG + + ++ VGDIV + G+++P DG+++ G S +DES +SGE PV +
Sbjct: 213 AVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKS 271
Query: 297 RDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRL--MVTLSEGGEDETPLQ-----VKLNG 349
+ + T G K+ T VG T ++ +V + G + P+Q V
Sbjct: 272 KGDE-VFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGS--KPPIQRLADKVVAYF 328
Query: 350 VATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAV 409
+ TV+ A+ F+ W I LL F + ++VVA
Sbjct: 329 IPTVLL-----VAISAFIY-----------------WYFIAHAPLLFAFTTLIAVLVVAC 366
Query: 410 PEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLW 469
P LA +L M K L+++ A E + + DKTGTLT VT L
Sbjct: 367 PCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLV 426
Query: 470 ICNEAKTIKSGDNEKLLK 487
N GD +LL+
Sbjct: 427 PLN-------GDERELLR 437
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 3e-27
Identities = 32/142 (22%), Positives = 64/142 (45%), Gaps = 9/142 (6%)
Query: 521 LGTPTERAILEFGLILGGDSTFHREESAIVKVE--PFNSVKKRMSVLVSLPNNGGFRVFC 578
L + A+LE S K++ PF+ ++RMSV+V+ N ++ C
Sbjct: 32 LKNLLDTAVLEGTDEES----ARSLASRWQKIDEIPFDFERRRMSVVVAE-NTEHHQLVC 86
Query: 579 KGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKA 638
KGA + ILN+C ++ + +G+ VP+ + + + V + + + LR + +A + +
Sbjct: 87 KGALQEILNVCSQVRH-NGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGD 145
Query: 639 ESIP-ENNYTLIAVVGIKDPVR 659
E++ L + D
Sbjct: 146 YQRADESDLILEGYIAFLDHHH 167
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 68.3 bits (166), Expect = 1e-11
Identities = 85/565 (15%), Positives = 167/565 (29%), Gaps = 192/565 (33%)
Query: 490 VSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPT--ERAILEFGLILGGDSTFHREES 547
V D +SI E + I+ + + F +L ++
Sbjct: 38 VQD-----MPKSILS---KEEIDH------IIMSKDAVSGTLRLFWTLL-------SKQE 76
Query: 548 AIVK--VEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEE 605
+V+ VE ++ L+S + + S + E
Sbjct: 77 EMVQKFVE--EVLRINYKFLMS-----PIKTEQRQPSMMTRMY---------------IE 114
Query: 606 QRKNLTNVINGFSS------EALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVR 659
QR L N F+ + L A +++ P N + + G+
Sbjct: 115 QRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELR--------PAKN---VLIDGVL---- 159
Query: 660 PGVRE---AVETCLAAGITVRMVTGDNIH--TAKAIAKECGILT---------DGGLAIE 705
G + A++ CL+ + +M I K +L D
Sbjct: 160 -GSGKTWVALDVCLSYKVQCKM--DFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWT-S 215
Query: 706 GTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNV--------F----------- 746
+D S + + +L+ + +S P + +LV L NV F
Sbjct: 216 RSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV--LLNVQNAKAWNAFNLSCKILLTTR 273
Query: 747 -KEVVAVTGNGTNDAPALHEADIGL-----------AMGIAGTEVAKENADV------II 788
K+V T +L + L + ++ +E II
Sbjct: 274 FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSII 333
Query: 789 ---MDDNFTTIVTVARWGRSVYINIQKFVQ-FQLTVNI----------VALVINFVA-AC 833
+ D +A W ++N K + ++N+ L + F A
Sbjct: 334 AESIRDG------LATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV-FPPSAH 386
Query: 834 ITGSAPLTAVQLLWVNM-------IMDTLGALALATEPPHEG----------LMQRPPIG 876
I P + L+W ++ +++ L +L + P E L +
Sbjct: 387 I----PTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENE 442
Query: 877 RNVHFITVTMWRNIIGQSIYQIIVLGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQV 936
+H R+I+ Y I TF ++ L+ + ++
Sbjct: 443 YALH-------RSIVDH--YNIP----KTFDSDDLIPPY-------LDQYFYSHIGH--- 479
Query: 937 FNEINSRDMEKINVFRGIFSSWVFI 961
+ N E++ +FR +F + F+
Sbjct: 480 -HLKNIEHPERMTLFRMVFLDFRFL 503
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 62.9 bits (152), Expect = 5e-10
Identities = 90/656 (13%), Positives = 157/656 (23%), Gaps = 254/656 (38%)
Query: 1 MENYLKKNFD-------VDPKRPSEEALMRWRSAVRVVKNPRRRFRMVADLAKRAEAERK 53
+E L+ N+ + ++PS M + + N + F AK
Sbjct: 83 VEEVLRINYKFLMSPIKTEQRQPSMMTRM-YIEQRDRLYNDNQVF------AKY---NVS 132
Query: 54 RKKLQEKLRVALYVQKAA----LHFIDAGSRPIEYKLSQETLLAGYGIEPDELESIVRSH 109
R + KLR AL + A + G + G G
Sbjct: 133 RLQPYLKLRQALLELRPAKNVLID----G-------------VLGSG------------- 162
Query: 110 NSKAVESRGGVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWM------- 162
K +A +V S +V Q F FW+
Sbjct: 163 --KTW--------VALDV-------CLSYKV---QCKMDFK--------IFWLNLKNCNS 194
Query: 163 --FVWEALHDLTLII-LMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDY 219
V E L L I + I + L LL Y
Sbjct: 195 PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLR------IHSIQAELRRLL-----KSKPY 243
Query: 220 KQSL----------QFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIV-HLSIGDQVP 268
+ L + A + K L+ TR + D + H+S+
Sbjct: 244 ENCLLVLLNVQNAKAWNAFNLSCKILL--TTRF-----KQVTDFLSAATTTHISLDHHSM 296
Query: 269 ------ADGILISGYSLTIDESSLSGETEPVHINRDRPFLLS--GTKVQDGSGKMLVTSV 320
+L+ L L E + P LS ++D
Sbjct: 297 TLTPDEVKSLLLK--YLDCRPQDLPREVLTTN-----PRRLSIIAESIRD---------- 339
Query: 321 GMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGL----------------VF--- 361
W V + + T+I + L VF
Sbjct: 340 -GLATWDNW-------------KHVNCDKLTTII-ESSLNVLEPAEYRKMFDRLSVFPPS 384
Query: 362 -----AVLTFLVLALRFLVEKAQHHQIKHW---SSIDAM----KLLNYFAIAVTIVVVAV 409
+L+ + W D M KL Y +
Sbjct: 385 AHIPTILLSLI------------------WFDVIKSDVMVVVNKLHKYSLVE-------- 418
Query: 410 PEGLPLAVTL-SLAFAMK-KLMNDKALVRHLSACETMGSASCICTDKTGTLTTN------ 461
+ +++ S+ +K KL N+ AL H S + +D +
Sbjct: 419 KQPKESTISIPSIYLELKVKLENEYAL--HRSIVDHYNIPKTFDSDDLIPPYLDQYFYSH 476
Query: 462 ---HMVVTKL---------------WICNEAKTIKSGDNEKLLKPSVSD-AVFNIFLQSI 502
H+ + ++ E K ++ + I
Sbjct: 477 IGHHLKNIEHPERMTLFRMVFLDFRFL--EQKIRHDSTAWNASGSILNTLQQLKFYKPYI 534
Query: 503 FQNTG--SEVVKD-----KDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVK 551
N +V N++ + +L L+ ++ F + +
Sbjct: 535 CDNDPKYERLVNAILDFLPKIEENLICSK-YTDLLRIALMAEDEAIFEEAHKQVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.8 bits (105), Expect = 2e-04
Identities = 49/340 (14%), Positives = 102/340 (30%), Gaps = 96/340 (28%)
Query: 216 VSDYKQSLQFKALDKEKKNLIVQVTRDG--YR-------KKLSIYDLVVGDIVHL----- 261
V D +S+ +E ++I+ R K+ + V +++ +
Sbjct: 38 VQDMPKSI-LS--KEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFL 94
Query: 262 --SIGDQVPADGILISGYSLTIDESSLSGETEPV---HINRDRPFL-----LSGTKVQDG 311
I + ++ Y D L + + +++R +P+L L +++
Sbjct: 95 MSPIKTEQRQPSMMTRMYIEQRDR--LYNDNQVFAKYNVSRLQPYLKLRQALL--ELRPA 150
Query: 312 SGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLAL 371
V G+ G GK + V L
Sbjct: 151 KN---VLIDGV-------------LG----------------SGK-----TWVALDVC-L 172
Query: 372 RFLVEKAQHHQIKHWSSI-------DAMKLLNYFAIAVTIVVVAVPEG---LPLAVTLSL 421
+ V+ +I W ++ +++L + + + + L + S+
Sbjct: 173 SYKVQCKMDFKI-FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH-SI 230
Query: 422 AFAMKKLMNDK----AL-----VRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICN 472
+++L+ K L V++ A SC K LTT VT
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFN-LSC----KI-LLTTRFKQVTDFLSAA 284
Query: 473 EAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVK 512
I + L P ++ +L Q+ EV+
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT 324
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 57.9 bits (141), Expect = 2e-10
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 239 VTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRD 298
V RDG + + ++ VGDIV + G+++P DG+++ G S +DES +SGE PV ++
Sbjct: 16 VIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKG 74
Query: 299 RPFLLSGTKVQDGSGKMLVTSVGMRT 324
+ T G K+ T VG T
Sbjct: 75 DE-VFGATINNTGVLKIRATRVGGET 99
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 51.7 bits (124), Expect = 3e-07
Identities = 27/207 (13%), Positives = 61/207 (29%), Gaps = 41/207 (19%)
Query: 605 EQRKNLTN-VING---FSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRP 660
+ L + V++ E + + F + + K E + + V +R
Sbjct: 33 PEWMALKDGVLSKTLSIK-EGVGRM---FGLLPSSLKEE--------ITSFVLEDAKIRE 80
Query: 661 GVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGIL----------TDGGLAIEGTDFR 710
G RE V I +++G + + + + I+
Sbjct: 81 GFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPH-- 138
Query: 711 SKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGL 770
+ K ++ +L + ++ + G+ D A +D+
Sbjct: 139 -----------SCKGTCSNQCGCCKPSVIHELSEPNQYIIMI-GDSVTDVEAAKLSDLCF 186
Query: 771 AMGIAGTEVAKENADVIIMDDNFTTIV 797
A E ++N + + D F I
Sbjct: 187 ARDYLLNECREQNLNHLPYQD-FYEIR 212
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 9e-07
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 246 KKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDRPFLLSG 305
+++ + + GDI+ + G + P DG +I G+S +DES ++GE PV +++G
Sbjct: 35 EQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEAMPVAKKPGST-VIAG 92
Query: 306 TKVQDGSGKMLVTSVGMRT 324
+ Q+GS + T VG T
Sbjct: 93 SINQNGSLLICATHVGADT 111
|
| >2l1w_B Vacuolar calcium ATPase BCA1 peptide; calmodulin, calmodulin complex, soybean calmodulin, vacuolar ATPase, metal binding protein; NMR {Glycine max} Length = 26 | Back alignment and structure |
|---|
Score = 38.6 bits (89), Expect = 2e-04
Identities = 15/25 (60%), Positives = 20/25 (80%)
Query: 20 ALMRWRSAVRVVKNPRRRFRMVADL 44
A RWRS+V +VKN RRFRM+++L
Sbjct: 1 ARQRWRSSVSIVKNRARRFRMISNL 25
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 8e-04
Identities = 26/153 (16%), Positives = 42/153 (27%), Gaps = 35/153 (22%)
Query: 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGI---------LTDGGLA--IE 705
P+ G E V V +G + + + L +
Sbjct: 75 PLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDALNGLVT 134
Query: 706 GT--DFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPAL 763
G SK + + L L + + V G+G ND
Sbjct: 135 GHMMFSHSKG-EMLLVLQRLLNISK------------------TNTLVV-GDGANDLSMF 174
Query: 764 HEADIGLAMGIAGTEVAKENADVIIMDDNFTTI 796
A I +A EV K++A I + + I
Sbjct: 175 KHAHIKIAFN--AKEVLKQHATHCINEPDLALI 205
|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
Score = 40.5 bits (94), Expect = 8e-04
Identities = 13/95 (13%), Positives = 35/95 (36%), Gaps = 26/95 (27%)
Query: 13 PKRPSEE--ALMRWRSAVRVVKNPRRRFRMVADLAKRAEAERKRK-KLQEKLRVAL---Y 66
R ++E ++ +WR +R R L + A + + + +EK + L
Sbjct: 77 ADRLTQEPESIRKWRE--------EQRKR----LQELDAASKVMEQEWREKAKKDLEEWN 124
Query: 67 VQKAALHFIDAGSRPIEYKLSQETLLAGYGIEPDE 101
+++ ++ +++ + +PD
Sbjct: 125 QRQSEQ--VEKNKI--NNRIADKAFYQ----QPDA 151
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1039 | ||||
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 6e-40 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 6e-19 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 1e-17 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 4e-36 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 1e-32 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 1e-31 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 4e-23 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 6e-23 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 5e-16 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 4e-14 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 3e-09 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 8e-08 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 3e-06 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 1e-05 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 0.002 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 0.003 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 0.003 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 0.004 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 0.004 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 152 bits (385), Expect = 6e-40
Identities = 57/281 (20%), Positives = 105/281 (37%), Gaps = 37/281 (13%)
Query: 761 PALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTV 820
P A I + + +AK+NA V ++ +V GR++Y N+++F+++ ++
Sbjct: 193 PEGLPAVITTCLALGTRRMAKKNAIV-------RSLPSVETLGRAIYNNMKQFIRYLISS 245
Query: 821 NIVALVINFVAACITGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVH 880
N+ +V F+ A + L VQLLWVN++ D L A AL PP +M RPP
Sbjct: 246 NVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEP 305
Query: 881 FITVTMWRNIIGQSIYQIIVLGVLTFCGKKILKLSGPNATL------------------- 921
I+ ++ + Y V + GP T
Sbjct: 306 LISGWLFFRYMAIGGYVGAAT-VGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGL 364
Query: 922 --------ILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVFIAVLVATVGFQVI 973
T + V ++ N +NS + + + + + + ++ +
Sbjct: 365 DCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFL 424
Query: 974 IVEL--LGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCI 1012
I+ + L L+ WL + I + +LK I
Sbjct: 425 ILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFI 465
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 89.0 bits (220), Expect = 6e-19
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 10/137 (7%)
Query: 338 EDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNY 397
+D+TPLQ KL+ + K+ + V +L+ F I+ + Y
Sbjct: 129 QDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGA--------IYY 180
Query: 398 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDK--T 455
F IAV + V A+PEGLP +T LA +++ A+VR L + ET+G A +
Sbjct: 181 FKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIR 240
Query: 456 GTLTTNHMVVTKLWICN 472
+++N V +++
Sbjct: 241 YLISSNVGEVVCIFLTA 257
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 84.7 bits (209), Expect = 1e-17
Identities = 31/158 (19%), Positives = 57/158 (36%), Gaps = 15/158 (9%)
Query: 119 GVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMI 178
E VS G+ ++V YG N + +S W V E DL + IL++
Sbjct: 8 STEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLL 67
Query: 179 CAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQ 238
A +S + EG V+ +L+++ V +++ A++ K+
Sbjct: 68 AACISFVLAWFEEGEETITAFVEPFVI-LLILIANAIVGVWQERNAENAIEALKEYEPAA 126
Query: 239 VT--RDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILI 274
+ ++KL G+Q+ LI
Sbjct: 127 TEQDKTPLQQKL------------DEFGEQLSKVISLI 152
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 132 bits (332), Expect = 4e-36
Identities = 62/161 (38%), Positives = 89/161 (55%), Gaps = 6/161 (3%)
Query: 647 TLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG----GL 702
T DP R V +++ C AGI V M+TGDN TA AI + GI +
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 69
Query: 703 AIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPA 762
A G +F E +E + AR P+ K +V L++ + E+ A+TG+G NDAPA
Sbjct: 70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQS-YDEITAMTGDGVNDAPA 128
Query: 763 LHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWG 803
L +A+IG+AMG +GT VAK +++++ DDNF+TIV G
Sbjct: 129 LKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 123 bits (310), Expect = 1e-32
Identities = 34/212 (16%), Positives = 69/212 (32%), Gaps = 15/212 (7%)
Query: 463 MVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDG----RT 518
M V +W N+ + +++ + + + ++ +
Sbjct: 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKR 61
Query: 519 NILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLP-NNGGFRVF 577
+ G +E A+L+ + G R+ + V FNS K + N +
Sbjct: 62 DTAGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLV 121
Query: 578 CKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDI----- 632
KGA E IL+ C I+ GK +P+ +E + N R L ++
Sbjct: 122 MKGAPERILDRCSSILV-QGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKF 180
Query: 633 ----KGNHKAESIPENNYTLIAVVGIKDPVRP 660
K + + P + ++ + D
Sbjct: 181 PRGFKFDTDELNFPTEKLCFVGLMSMIDHHHH 212
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 125 bits (315), Expect = 1e-31
Identities = 46/384 (11%), Positives = 90/384 (23%), Gaps = 63/384 (16%)
Query: 430 NDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKS-GDNEKLLKP 488
+ + L +G S I + + +KS G N
Sbjct: 22 SALTVYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNW--- 78
Query: 489 SVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESA 548
+ VF+I L L A + + A
Sbjct: 79 DMLFIVFSIHL---------------IDILKKLSHDEIEAFMYQDEPVELKLQNISTNLA 123
Query: 549 IVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRK 608
+ + + N + + A+ + +S+
Sbjct: 124 DCFNLNEQLPLQFLDNVKV-GKNNIYAALEEFATTE---------------LHVSDATLF 167
Query: 609 NLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPV--RPGVREAV 666
+L + + E + L + E + + + V+ +
Sbjct: 168 SLKGALWTLAQEVYQEWYLGSKLY---EDVEKKIARTTFKTGYIYQEIILRPVDEVKVLL 224
Query: 667 ETCLAAGITVRMVTGDNIHTAKAIAKECGIL-------------TDGGLAIEGTDFRSKN 713
AG + + TG + G+L +
Sbjct: 225 NDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGK 284
Query: 714 PQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEAD---IGL 770
P + YI V K+ V + G+ D + + IG
Sbjct: 285 PN--PFSYIAALYGNNRDKYESYINKQDN-IVNKDDVFIVGDSLADLLSAQKIGATFIGT 341
Query: 771 AMGIAGTEVAKE----NADVIIMD 790
G+ G + A E +AD +I
Sbjct: 342 LTGLKGKDAAGELEAHHADYVINH 365
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 94.0 bits (233), Expect = 4e-23
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 30/155 (19%)
Query: 647 TLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEG 706
T G D ++ + AV+ GI V M+TGDN +A+A
Sbjct: 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEA----------------- 53
Query: 707 TDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEA 766
+ + V+A P K V +L+ KEVVA G+G NDAPAL +A
Sbjct: 54 ----------ISRELNLDLVIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQA 101
Query: 767 DIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVAR 801
D+G+A+G +G++VA E+ D++++ D+ +V +
Sbjct: 102 DLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 96.9 bits (240), Expect = 6e-23
Identities = 45/240 (18%), Positives = 83/240 (34%), Gaps = 49/240 (20%)
Query: 463 MVVTKLWICNEAKTIKSGDNE------------------KLLKPSVSDAVFNIFLQSIFQ 504
M V K++I ++ NE K ++ D + +
Sbjct: 1 MSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALC 60
Query: 505 NTGSEVVKDKDGRTNILGTPTERAILEFGLILG----------------GDSTFHREESA 548
N S + G +G TE A+ + ++ R+
Sbjct: 61 NDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMK 120
Query: 549 IVKVEPFNSVKKRMSVLVSLPNN----GGFRVFCKGASEIILNMCDKIINADGKAVPISE 604
F+ +K MSV S + G ++F KGA E +++ C+ + VP++
Sbjct: 121 KEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTG 179
Query: 605 EQRKNLTNVIN--GFSSEALRTLCLAFQDIKGNHKAESI--------PENNYTLIAVVGI 654
++ + +VI G + LR L LA +D + + E + T + VVG+
Sbjct: 180 PVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 76.2 bits (186), Expect = 5e-16
Identities = 20/156 (12%), Positives = 45/156 (28%), Gaps = 5/156 (3%)
Query: 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQE 716
+R G RE V I +++G + + +
Sbjct: 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDR---IYCNHASFDNDYIH 131
Query: 717 MQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAG 776
+ + K ++ + + + + + G+ D A +D+ A
Sbjct: 132 IDWPHSCKGTCSNQCGCCKPSVIHE-LSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLL 190
Query: 777 TEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQK 812
E ++N + + D F I + V +Q
Sbjct: 191 NECREQNLNHLPYQD-FYEIRKEIENVKEVQEWLQN 225
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 67.4 bits (164), Expect = 4e-14
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 16/110 (14%)
Query: 237 VQVTRDGYR--KKLSIYDLVVGDIVHLSIGDQVPADGILISGY--SLTIDESSLSGETEP 292
+V R + +++ D+V GDIV +++GD+VPAD ++S +L +D+S L+GE+
Sbjct: 3 GKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVS 62
Query: 293 VH------------INRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLM 330
V + L SGT + G +V + G+ TE G++
Sbjct: 63 VIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIR 112
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.1 bits (134), Expect = 3e-09
Identities = 27/165 (16%), Positives = 50/165 (30%), Gaps = 6/165 (3%)
Query: 627 LAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHT 686
+ F+ A P + + PG+RE V + V +++G
Sbjct: 52 VPFKAALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSI 111
Query: 687 AKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVF 746
+ +A + I A + E L+ + +
Sbjct: 112 VEHVASKLNIPATNVFANR---LKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHF- 167
Query: 747 KEVVAVTGNGTNDAPALHEADIGLAMG-IAGTEVAKENADVIIMD 790
+ + + G+G D A AD + G + K+NA I D
Sbjct: 168 -KKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD 211
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 51.7 bits (122), Expect = 8e-08
Identities = 25/141 (17%), Positives = 48/141 (34%), Gaps = 9/141 (6%)
Query: 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQE 716
G E ++ G V +V+G I ++ G+ + D + E
Sbjct: 75 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVE 134
Query: 717 MQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAG 776
+ + + + ++ VAV G+G ND +A + +A
Sbjct: 135 GE------VLKENAKGEILEKIAKIEGINLEDTVAV-GDGANDISMFKKAGLKIAFC--A 185
Query: 777 TEVAKENADVIIMDDNFTTIV 797
+ KE AD+ I + I+
Sbjct: 186 KPILKEKADICIEKRDLREIL 206
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 47.3 bits (111), Expect = 3e-06
Identities = 32/207 (15%), Positives = 60/207 (28%), Gaps = 60/207 (28%)
Query: 655 KDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGI------------------ 696
+ EA+ + GI + +VTG+ + A+A + G
Sbjct: 17 NRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 76
Query: 697 -------------------LTDGGLAIEGTDFRSK--------NPQEMQELIPKLQVMAR 729
+ + D R+ N + ++E+I +L +
Sbjct: 77 IFLASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLV 136
Query: 730 SSPTDKYILVTQLRNVFKEV--------------VAVTGNGTNDAPALHEADIGLAMGIA 775
+ + I V + VA G+G ND A +A+ A
Sbjct: 137 AVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQA 196
Query: 776 GTEVAKENADVIIMDDNFTTIVTVARW 802
++ KENAD + +
Sbjct: 197 -PKILKENADYVTKKEYGEGGAEAIYH 222
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 45.2 bits (106), Expect = 1e-05
Identities = 11/46 (23%), Positives = 15/46 (32%), Gaps = 1/46 (2%)
Query: 746 FKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDD 791
V G+ ND L EA G+ A V +E +
Sbjct: 144 LYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAVHT 188
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 38.9 bits (89), Expect = 0.002
Identities = 11/53 (20%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Query: 736 YILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVII 788
IL+ + + + G+ ND P D +G + +N II
Sbjct: 185 KILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKK-AQNVSSII 236
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 38.8 bits (89), Expect = 0.003
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 747 KEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDN 792
+E AV G+ ND L A G+AMG A E K AD + + ++
Sbjct: 230 EETAAV-GDSLNDKSMLEAAGKGVAMGNA-REDIKSIADAVTLTND 273
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 38.4 bits (88), Expect = 0.003
Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Query: 728 ARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVI 787
R + + + + E + G+ ND + A +G+A+ A KE A+ +
Sbjct: 194 KRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNA-IPSVKEVANFV 252
Query: 788 IMDDN 792
+
Sbjct: 253 TKSNL 257
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 37.7 bits (86), Expect = 0.004
Identities = 25/214 (11%), Positives = 59/214 (27%), Gaps = 68/214 (31%)
Query: 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKE-----------CGILTDGGLAIE- 705
+ E++ + G+TV +++G+ I A+ GI+ D +I+
Sbjct: 21 ISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKK 80
Query: 706 ---------------------------------GTDFRSKNPQEMQELIPKLQVMARSSP 732
G D ++ +++ + S
Sbjct: 81 FFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSG 140
Query: 733 TDKYI------------LVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVA 780
++ + ++ ++ + + V G+ ND P A T+
Sbjct: 141 YSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANA-TDNI 199
Query: 781 KENADVIIMDDNFTTIVTVARWGRSVYINIQKFV 814
K +D + G + + F
Sbjct: 200 KAVSDFVSDYSY----------GEEIGQIFKHFE 223
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 38.1 bits (87), Expect = 0.004
Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 744 NVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDN 792
N+ + V V G+ ND L A+ A T+ AK +A ++ +
Sbjct: 220 NISNDQVLVVGDAENDIAMLSNFKYSFAVANA-TDSAKSHAKCVLPVSH 267
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1039 | |||
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 100.0 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.98 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.97 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.94 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.93 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.9 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.84 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.24 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.21 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.1 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.1 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.09 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.02 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.0 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.99 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.94 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.93 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.93 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.81 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.68 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.66 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.65 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.54 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.94 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.73 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.6 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.51 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.45 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.44 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.29 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 96.84 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.84 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.6 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.32 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.22 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.11 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 95.84 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.8 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 95.76 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 94.92 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 94.39 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 94.29 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 94.25 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 94.22 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 94.08 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 93.65 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 93.2 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 92.93 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 91.66 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 91.32 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 88.54 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 88.42 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 87.27 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 85.83 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 83.15 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=0 Score=402.49 Aligned_cols=431 Identities=23% Similarity=0.314 Sum_probs=335.0
Q ss_pred CCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--C
Q ss_conf 89889998818998999999999999721299856889998199999999856799999999999764157777889--8
Q 001638 118 GGVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPTEGWP--D 195 (1039)
Q Consensus 118 ggv~g~~~~l~t~~~~Gl~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~i~a~isl~~~~~~~~~~--~ 195 (1039)
.+++++++.|+||+++||+++|+++|++.||+|++++++++|+|.+++++|+|+++++|++++++|++++....++. .
T Consensus 7 ~~~e~v~~~l~td~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~ 86 (472)
T d1wpga4 7 KSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEETIT 86 (472)
T ss_dssp SCHHHHHHHHTCCTTTCBCHHHHHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTTSTTS
T ss_pred CCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCH
T ss_conf 99999999969693559699999999980499879999999999999999838999999999999999998732653202
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCCCCCCCEEEECCCCCCCCCEEEEE
Q ss_conf 64313678999999999999999999999999731039945999969969998737754483999758980011189995
Q 001638 196 GVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILIS 275 (1039)
Q Consensus 196 ~~~~~~~i~~~illv~~vta~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgiii~ 275 (1039)
.|+|++.|++.+++...++.+++++.++...++.+....
T Consensus 87 ~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~----------------------------------------- 125 (472)
T d1wpga4 87 AFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPA----------------------------------------- 125 (472)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCC-----------------------------------------
T ss_pred HHHHHHHHHHEEEEEEEEEEEEECHHHHHHHHHHHHCCC-----------------------------------------
T ss_conf 376766631124465257767750177788877521222-----------------------------------------
Q ss_pred ECCEEEECCCCCCCCCCCCCCCCCCEEECCCEEEECCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 07326866677789974224899961221517852875899988413114678988730589888803787867999999
Q 001638 276 GYSLTIDESSLSGETEPVHINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIG 355 (1039)
Q Consensus 276 g~~l~VDES~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~ 355 (1039)
....+++|++.++++.+..++
T Consensus 126 -----------------------------------------------------------~~~~~~~P~d~~l~~~g~~i~ 146 (472)
T d1wpga4 126 -----------------------------------------------------------ATEQDKTPLQQKLDEFGEQLS 146 (472)
T ss_dssp -----------------------------------------------------------CCCCCCCHHHHHHHHHHHHHH
T ss_pred -----------------------------------------------------------CCCCCCCHHHHHHHHHHHHHH
T ss_conf -----------------------------------------------------------356658648889999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 9999999999999999999984300-245554203467899999999998886504751499999999999996012111
Q 001638 356 KIGLVFAVLTFLVLALRFLVEKAQH-HQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKAL 434 (1039)
Q Consensus 356 ~~~l~~a~l~~iv~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~aitilvvaiP~~Lplavtl~la~~~~~l~~~~il 434 (1039)
..+..++...+...+ ++... .....| ...+++.|..+++++|+++|||||+++|++++++++||+++|++
T Consensus 147 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~----~~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rmak~~~l 217 (472)
T d1wpga4 147 KVISLICVAVWLINI-----GHFNDPVHGGSW----IRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAI 217 (472)
T ss_dssp HHHHHHHHHHHHHCC-----TTSSSCCSSSCS----SSCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEE
T ss_pred HHHHHHHHHHHHHHH-----HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 999978799999999-----999999861046----89999999999999998675168999999999999999863660
Q ss_pred CCCCHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECC
Q ss_conf 25660111036606999347674434943999999737421114699634558889889999999999851597243338
Q 001638 435 VRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDK 514 (1039)
Q Consensus 435 vr~~~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~ 514 (1039)
||++++||++|+.+++|+|||-..|
T Consensus 218 Vr~L~avE~~g~~~~~~~~k~i~~~------------------------------------------------------- 242 (472)
T d1wpga4 218 VRSLPSVETLGRAIYNNMKQFIRYL------------------------------------------------------- 242 (472)
T ss_dssp ESCTTHHHHHTHHHHHHHHHHHHHH-------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-------------------------------------------------------
T ss_conf 6658999999999888867764013-------------------------------------------------------
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHC
Q ss_conf 99711048901899999999939994101235607898348999970289997489980799991847899953233121
Q 001638 515 DGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIIN 594 (1039)
Q Consensus 515 ~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~krmsviv~~~~~~~~~~~~KGa~e~Il~~C~~~~~ 594 (1039)
T Consensus 243 -------------------------------------------------------------------------------- 242 (472)
T d1wpga4 243 -------------------------------------------------------------------------------- 242 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 59940139999999999999999470371778999756899876788888927622301359999117999999997899
Q 001638 595 ADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGI 674 (1039)
Q Consensus 595 ~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~lAyk~i~~~~~~~~~~e~~l~llG~i~i~D~lr~~v~~aI~~l~~aGI 674 (1039)
T Consensus 243 -------------------------------------------------------------------------------- 242 (472)
T d1wpga4 243 -------------------------------------------------------------------------------- 242 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred EEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 79998789999999999991997799711317322348988998432651499962941199999998520898999993
Q 001638 675 TVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTG 754 (1039)
Q Consensus 675 ~v~miTGD~~~ta~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~l~~~~g~vVa~iG 754 (1039)
T Consensus 243 -------------------------------------------------------------------------------- 242 (472)
T d1wpga4 243 -------------------------------------------------------------------------------- 242 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCCCCHHHHHHCCCCEEECCCCCHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99569887620892353068872888841488860499038999999968998989999999999999999999999997
Q 001638 755 NGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACI 834 (1039)
Q Consensus 755 DG~NDa~aL~~AdVGIamgi~gt~vak~~aDivl~~~~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~ 834 (1039)
++.|+..+...+++.++
T Consensus 243 ---------------------------------------------------------------l~~n~~~v~~~~~~~~l 259 (472)
T d1wpga4 243 ---------------------------------------------------------------ISSNVGEVVCIFLTAAL 259 (472)
T ss_dssp ---------------------------------------------------------------HHHHHHHHHHHHHHHHS
T ss_pred ---------------------------------------------------------------HHHHHHHHHHHHHHHHC
T ss_conf ---------------------------------------------------------------34369999999999973
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 09995579999999977668978570569998665478999988776417879999998999999999997710001146
Q 001638 835 TGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIVLGVLTFCGKKILKL 914 (1039)
Q Consensus 835 ~~~~pl~~vqllwinli~d~l~alaLa~e~p~~~lm~r~P~~~~~~li~~~m~~~i~~~~i~q~~v~~~l~~~~~~~~~~ 914 (1039)
..+.|++++|+||+|+++|++|+++|++|||++++|+|||++++++++++.||++++.++++..+..+.+.+....+...
T Consensus 260 ~~p~pl~~~qILwinli~d~lpaiaL~~ep~d~~iM~~~Pr~~~~~li~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~ 339 (472)
T d1wpga4 260 GLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAED 339 (472)
T ss_dssp CCCCSCCHHHHHHHHHTTTHHHHHHHTTCCCCSGGGGSCCCCTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHHTTTSSS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99864237999999987588899999638885443049999997566499999999999999999999999999997237
Q ss_pred C---------------C-------C----CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 8---------------9-------9----832202478999999999999977514654332124513499999999999
Q 001638 915 S---------------G-------P----NATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVFIAVLVATV 968 (1039)
Q Consensus 915 ~---------------~-------~----~~~~~~~t~~f~~~v~~qifn~~n~r~~~~~~~f~~~~~n~~f~~~~~~~~ 968 (1039)
. . . ......+|+.|++++++|+||.+++|+.++..+.+++++|++++.++++.+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~rs~~~s~~~~~~~~N~~l~~av~i~~ 419 (472)
T d1wpga4 340 GPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSM 419 (472)
T ss_dssp SCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHH
T ss_conf 99876787767764067765446520345567678999999999999999999825775422257631699999999999
Q ss_pred HHHHHH--HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 999998--72432301355789688999999998889999988560047
Q 001638 969 GFQVII--VELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVG 1015 (1039)
Q Consensus 969 ~~q~~~--v~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~i~~~ 1015 (1039)
++|+++ +++++.+|++.||++.+|+++++++++.++++++.|++..+
T Consensus 420 ~l~~~i~yiP~l~~vf~~~pL~~~~w~i~l~~~~~~~~~~El~K~~~R~ 468 (472)
T d1wpga4 420 SLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARN 468 (472)
T ss_dssp HHHHHHHHSTTTHHHHTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999999866778888065889999999999999999999999998310
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.98 E-value=3.5e-32 Score=250.97 Aligned_cols=150 Identities=41% Similarity=0.618 Sum_probs=142.5
Q ss_pred ECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCC----CEEECCCCCCCCHHHHHHHCCCCEEE
Q ss_conf 01359999117999999997899799987899999999999919977997----11317322348988998432651499
Q 001638 652 VGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGG----LAIEGTDFRSKNPQEMQELIPKLQVM 727 (1039)
Q Consensus 652 i~i~D~lr~~v~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~~----~vi~g~~~~~~~~~~~~~~~~~~~V~ 727 (1039)
+..-||+||+++++|+.|+++||+++|+|||+..||+++|++|||..++. ..++|.++......++.+..++..+|
T Consensus 15 ~~~~Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 94 (168)
T d1wpga2 15 TNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCF 94 (168)
T ss_dssp CCCECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEE
T ss_pred EEECCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 87348896539999999998849899989999799999999849988764111000346300001278876655322300
Q ss_pred EECCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHCCCEEEECCCCHHHHHHHHHH
Q ss_conf 9629411999999985208989999939956988762089235306887288884148886049903899999996
Q 001638 728 ARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWG 803 (1039)
Q Consensus 728 ar~sP~~K~~lV~~l~~~~g~vVa~iGDG~NDa~aL~~AdVGIamgi~gt~vak~~aDivl~~~~f~~i~~~i~~g 803 (1039)
+|++|+||..+|+.+|+. |++|+|+|||.||+|||++|||||+|+ +|+++|+++||+++++++|++|+.+|+||
T Consensus 95 ar~~p~~K~~lv~~l~~~-g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 95 ARVEPSHKSKIVEYLQSY-DEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp ESCCHHHHHHHHHHHHHT-TCCEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHC-CCCEEEEECCCCCHHHHHHCCEEEEEC-CCCHHHHHHCCEEECCCCHHHHHHHHHCC
T ss_conf 000114788899998740-454047706778889998598888865-51199998489999159989999999749
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.97 E-value=1.1e-29 Score=232.37 Aligned_cols=199 Identities=16% Similarity=0.250 Sum_probs=162.2
Q ss_pred CEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCC----CCCCCCCCHHHHHHHHHHHHC
Q ss_conf 4399999973742111469963455888988999999999985159724333899----711048901899999999939
Q 001638 462 HMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDG----RTNILGTPTERAILEFGLILG 537 (1039)
Q Consensus 462 ~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~g 537 (1039)
-|+|+++|.+++.++....+.............+..+..++++|+.+....+..+ .....|+|||.||+.++.+.|
T Consensus 1 ~MTV~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~ 80 (214)
T d1q3ia_ 1 MMTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSC 80 (214)
T ss_dssp CCEEEEEEETTEEEECCCC------CCCCCSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHH
T ss_pred CEEEEEEEECCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 95999999999999767777677764445898999999999970877444677777655664166859999999999959
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCEEEEEECCC-CCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 994101235607898348999970289997489-9807999918478999532331215994013999999999999999
Q 001638 538 GDSTFHREESAIVKVEPFNSVKKRMSVLVSLPN-NGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVING 616 (1039)
Q Consensus 538 ~~~~~~~~~~~il~~~pF~s~~krmsviv~~~~-~~~~~~~~KGa~e~Il~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~ 616 (1039)
.+....+..+++++.+||||+||||+++++.++ ++.+++|+|||||.||++|++++. +|...+++++.++.+.+.+++
T Consensus 81 ~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~-~g~~~~l~~~~~~~i~~~~~~ 159 (214)
T d1q3ia_ 81 GSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILV-QGKEIPLDKEMQDAFQNAYLE 159 (214)
T ss_dssp SCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHCCEEEEEEECCCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHEEE-CCCEEECHHHHHHHHHHHHHH
T ss_conf 8999998638286468557888778999972678874347852788999986343534-895300238899999999999
Q ss_pred HHHCCCCEEEEEEEECCCCC---------CCCCCCCCCCEEEEEECCCCCCCCC
Q ss_conf 94703717789997568998---------7678888892762230135999911
Q 001638 617 FSSEALRTLCLAFQDIKGNH---------KAESIPENNYTLIAVVGIKDPVRPG 661 (1039)
Q Consensus 617 ~a~~glr~l~lAyk~i~~~~---------~~~~~~e~~l~llG~i~i~D~lr~~ 661 (1039)
||++|+|||++|||+++.++ .+.+..++||+|+|++||.||||+.
T Consensus 160 ~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 160 LGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp HHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred HHHCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEEEECCCCC
T ss_conf 740876899999986583225554545701454221798998999988089899
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.94 E-value=1.4e-34 Score=268.71 Aligned_cols=322 Identities=13% Similarity=0.055 Sum_probs=222.7
Q ss_pred CCCHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCC
Q ss_conf 56601110366069993476744349439999997374211146996345588898899999999998515972433389
Q 001638 436 RHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKD 515 (1039)
Q Consensus 436 r~~~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~ 515 (1039)
+-+.+.|+||..+++|+|||||+|.|+|++..+......... ....+..+ ..++....+++. +.
T Consensus 28 ~ll~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~--------k~~g~n~~-~dl~~~~~~~~~-~~------ 91 (380)
T d1qyia_ 28 ELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKL--------KSLGLNSN-WDMLFIVFSIHL-ID------ 91 (380)
T ss_dssp HHHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHH--------HHTTCCCH-HHHHHHHHHHHH-HH------
T ss_pred HHHHCHHHCCCCEEEECCCCCCHHHHHHEEEEECCHHHHHHH--------HHCCCCHH-HHHHHHHHHHHH-HH------
T ss_conf 876120112564045337655100433111330532466766--------62688806-999999999999-98------
Q ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHCC
Q ss_conf 97110489018999999999399941012356078983489999702899974899807999918478999532331215
Q 001638 516 GRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINA 595 (1039)
Q Consensus 516 ~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~krmsviv~~~~~~~~~~~~KGa~e~Il~~C~~~~~~ 595 (1039)
.....+.+++.+++......+......++.+......||++.+|+|++.....+ ..+....||+++.+
T Consensus 92 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~-~~~~~~~~~a~~~~---------- 159 (380)
T d1qyia_ 92 -ILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKN-NIYAALEEFATTEL---------- 159 (380)
T ss_dssp -HHTTSCHHHHHHHHHCSSCHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHH-HHHHHHHHHHHHHT----------
T ss_pred -HHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC-CHHHHHHHCCHHHC----------
T ss_conf -774348985778987775436408999875365556775148888765324553-14475552137652----------
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCC--CHHHHHHHHHHCC
Q ss_conf 99401399999999999999994703717789997568998767888889276223013599991--1799999999789
Q 001638 596 DGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRP--GVREAVETCLAAG 673 (1039)
Q Consensus 596 ~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~lAyk~i~~~~~~~~~~e~~l~llG~i~i~D~lr~--~v~~aI~~l~~aG 673 (1039)
.+++..+..+...+.+++.+++|++++||+.++..+. ....+....|+++.++|+|| +++++++.|+++|
T Consensus 160 -----~~~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~~---~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aG 231 (380)
T d1qyia_ 160 -----HVSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEK---KIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAG 231 (380)
T ss_dssp -----TCSCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHHC---SCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTT
T ss_pred -----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC---CCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf -----8758889999868999999999998772202233455---33156675423013565334363999999999879
Q ss_pred CEEEEECCCCHHHHHHHHHHCCCCCC--CCCEEECCCCCCC-------------CHHHHHHHCCCCEEEEECCHHHHHHH
Q ss_conf 97999878999999999999199779--9711317322348-------------98899843265149996294119999
Q 001638 674 ITVRMVTGDNIHTAKAIAKECGILTD--GGLAIEGTDFRSK-------------NPQEMQELIPKLQVMARSSPTDKYIL 738 (1039)
Q Consensus 674 I~v~miTGD~~~ta~aiA~~~GI~~~--~~~vi~g~~~~~~-------------~~~~~~~~~~~~~V~ar~sP~~K~~l 738 (1039)
+++.|+|||+..+|+++++++||... ...++++.+.... .++.+ ....+++|++|.+|..+
T Consensus 232 i~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~----~~~~~~~~~~~~~k~~i 307 (380)
T d1qyia_ 232 FELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSY----IAALYGNNRDKYESYIN 307 (380)
T ss_dssp CEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHH----HHHHHCCCGGGHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCHHHH----HHHHHHCCCCHHHHHHH
T ss_conf 95999889979999999998199534785058744133311220331102369986999----99999808877889999
Q ss_pred HHHHHHCCCCEEEEECCCCCCHHHHHHCC---CCEEECCCCCHHHHH----CCCEEEECCCCHHHHHHH
Q ss_conf 99985208989999939956988762089---235306887288884----148886049903899999
Q 001638 739 VTQLRNVFKEVVAVTGNGTNDAPALHEAD---IGLAMGIAGTEVAKE----NADVIIMDDNFTTIVTVA 800 (1039)
Q Consensus 739 V~~l~~~~g~vVa~iGDG~NDa~aL~~Ad---VGIamgi~gt~vak~----~aDivl~~~~f~~i~~~i 800 (1039)
++.++.. ++.|+|||||.||+||++.|| ||++||+.|++.+++ .||+++. ++..+..++
T Consensus 308 v~~~~~~-~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~--~~~el~~il 373 (380)
T d1qyia_ 308 KQDNIVN-KDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVIN--HLGELRGVL 373 (380)
T ss_dssp CCTTCSC-TTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEES--SGGGHHHHH
T ss_pred HHHHCCC-CCEEEEECCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCCCEEEC--CHHHHHHHH
T ss_conf 9973899-88699988998999999987998899945888864377897679999988--999999999
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.93 E-value=3.6e-26 Score=206.52 Aligned_cols=127 Identities=37% Similarity=0.578 Sum_probs=119.1
Q ss_pred CCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCC
Q ss_conf 92762230135999911799999999789979998789999999999991997799711317322348988998432651
Q 001638 645 NYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKL 724 (1039)
Q Consensus 645 ~l~llG~i~i~D~lr~~v~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~~~ 724 (1039)
|.+..+.++++|++||+++++|+.|+++||+++|+|||+..+|.++|++|||..
T Consensus 9 d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~-------------------------- 62 (135)
T d2b8ea1 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL-------------------------- 62 (135)
T ss_dssp ECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE--------------------------
T ss_pred CCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHH--------------------------
T ss_conf 891479973688998119999999998599799975863355567776542221--------------------------
Q ss_pred EEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHCCCEEEECCCCHHHHHHHH
Q ss_conf 49996294119999999852089899999399569887620892353068872888841488860499038999999
Q 001638 725 QVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 725 ~V~ar~sP~~K~~lV~~l~~~~g~vVa~iGDG~NDa~aL~~AdVGIamgi~gt~vak~~aDivl~~~~f~~i~~~i~ 801 (1039)
++++++|++|..+|+.+|+. ++|+|+|||.||+|||++||+||+|+ ++++.++++||+++++++|++|+.+|+
T Consensus 63 -v~~~~~p~~k~~~v~~~q~~--~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 63 -VIAEVLPHQKSEEVKKLQAK--EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp -EECSCCHHHHHHHHHHHTTT--SCEEEEECSSSSHHHHHHSSEEEEEC-CC--------SEEESSCCTHHHHHHHC
T ss_pred -HCCCCCHHHHHHHHHHHHCC--CEEEEEECCCCCHHHHHHCCEEEECC-CCCHHHHHHCCEEEECCCHHHHHHHHC
T ss_conf -01211026799999999859--97899967877578897478624537-658789984999997899889999859
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.90 E-value=6.2e-23 Score=182.63 Aligned_cols=161 Identities=22% Similarity=0.257 Sum_probs=131.9
Q ss_pred HHHHHHHHHHHHCCCCCEEEC-CCCCCCCCCCCHHHHHHHHHHHHCCCCCCC----------------CCCCCEEEEECC
Q ss_conf 999999999985159724333-899711048901899999999939994101----------------235607898348
Q 001638 493 AVFNIFLQSIFQNTGSEVVKD-KDGRTNILGTPTERAILEFGLILGGDSTFH----------------REESAIVKVEPF 555 (1039)
Q Consensus 493 ~~~~~l~~~i~~n~~~~~~~~-~~~~~~~~g~p~e~All~~a~~~g~~~~~~----------------~~~~~il~~~pF 555 (1039)
+.++.++.+.++|+.+....+ .++.....|+|||.||+.++.+.|.+.... +..+++++.+||
T Consensus 48 ~~l~~ll~~~~LCn~a~l~~~~~~~~~~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF 127 (239)
T d1wpga3 48 DGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEF 127 (239)
T ss_dssp HHHHHHHHHHHHSCSCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHCCCHHHHHHHCEEEEEEEE
T ss_conf 99999999988427887053078975998689980799999999399757863243033320111455653707888600
Q ss_pred CCCCCCEEEEEECCCC----CEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH--HHCCCCEEEEEE
Q ss_conf 9999702899974899----8079999184789995323312159940139999999999999999--470371778999
Q 001638 556 NSVKKRMSVLVSLPNN----GGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGF--SSEALRTLCLAF 629 (1039)
Q Consensus 556 ~s~~krmsviv~~~~~----~~~~~~~KGa~e~Il~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~--a~~glr~l~lAy 629 (1039)
||+||||+++++.+++ +.+.+|+|||||.||++|+.++. +|...|++++.++.+.+.++++ |++|||||++||
T Consensus 128 ~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~ 206 (239)
T d1wpga3 128 SRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALAT 206 (239)
T ss_dssp ETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEE
T ss_pred CCCCCEEEEEEECCCCCCCCCEEEEEEECCHHHHHHHCCCEEC-CCCEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf 6566278999874899866631599984874999973623443-992630999999999999999867537888999999
Q ss_pred EECCCCCCCC--------CCCCCCCEEEEEECC
Q ss_conf 7568998767--------888889276223013
Q 001638 630 QDIKGNHKAE--------SIPENNYTLIAVVGI 654 (1039)
Q Consensus 630 k~i~~~~~~~--------~~~e~~l~llG~i~i 654 (1039)
|+++..+... ...|+||+|+|++||
T Consensus 207 k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 207 RDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp ESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred EECCCCCCCCCCCCHHHHHHHCCCCEEEEEECC
T ss_conf 987844011332341668876179999999879
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.84 E-value=7.4e-21 Score=167.29 Aligned_cols=98 Identities=33% Similarity=0.544 Sum_probs=88.9
Q ss_pred EEEEEECCEE--EEEECCCCCCCCEEEECCCCCCCCCEEEEEEC--CEEEECCCCCCCCCCCCCCC------------CC
Q ss_conf 5999969969--99873775448399975898001118999507--32686667778997422489------------99
Q 001638 236 IVQVTRDGYR--KKLSIYDLVVGDIVHLSIGDQVPADGILISGY--SLTIDESSLSGETEPVHINR------------DR 299 (1039)
Q Consensus 236 ~v~V~R~G~~--~~I~~~dLvvGDIV~l~~Gd~VPaDgiii~g~--~l~VDES~LTGEs~pv~k~~------------~~ 299 (1039)
.++|+|+|++ ++|++.||||||||.|++||+|||||+++++. ++.||||+|||||.|+.|.. ..
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred CEEEEECCCCEEEEEEHHHCCCCCEEEECCCCEEEECEEEEEEECCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCC
T ss_conf 26999999845999869998899899999999995156999961262689872000346898741366226543443333
Q ss_pred CEEECCCEEEECCEEEEEEEECCCHHHHHHHHHH
Q ss_conf 6122151785287589998841311467898873
Q 001638 300 PFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTL 333 (1039)
Q Consensus 300 ~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~ 333 (1039)
|++|+||.|.+|+++++|++||.+|++|+|++++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred CEEEECCEEEEEEEEEEEEEECCCCHHHHHHHHC
T ss_conf 4477416898456999999996003889999759
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.24 E-value=1.1e-10 Score=92.20 Aligned_cols=77 Identities=18% Similarity=0.138 Sum_probs=62.8
Q ss_pred EEECCHHHHHHHHHHHHHCCC---CEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHCCCEEEECCCCHHHHHHHHHH
Q ss_conf 996294119999999852089---89999939956988762089235306887288884148886049903899999996
Q 001638 727 MARSSPTDKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWG 803 (1039)
Q Consensus 727 ~ar~sP~~K~~lV~~l~~~~g---~vVa~iGDG~NDa~aL~~AdVGIamgi~gt~vak~~aDivl~~~~f~~i~~~i~~g 803 (1039)
-.......|...++.+.++.| +.++++|||.||.+|++.|++||||+ ++++.+|++||+++.+++..++..++.+.
T Consensus 145 ei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav~-na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 145 HVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp EEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHCCCCCCCCCCHHHEEEEECCCCHHHHHHHCCEEEEEC-CCCHHHHHHCCEEECCCCCCHHHHHHHHH
T ss_conf 99407767613320112110013324256626730799999789079988-98799998579998999847899999999
Q ss_pred H
Q ss_conf 8
Q 001638 804 R 804 (1039)
Q Consensus 804 R 804 (1039)
.
T Consensus 224 l 224 (230)
T d1wr8a_ 224 L 224 (230)
T ss_dssp H
T ss_pred H
T ss_conf 9
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.21 E-value=3.3e-10 Score=88.62 Aligned_cols=72 Identities=18% Similarity=0.223 Sum_probs=60.7
Q ss_pred CCHHHHHHHHHHHHHCCC---CEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHCCCEEEECCCCHHHHHHHHH
Q ss_conf 294119999999852089---8999993995698876208923530688728888414888604990389999999
Q 001638 730 SSPTDKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARW 802 (1039)
Q Consensus 730 ~sP~~K~~lV~~l~~~~g---~vVa~iGDG~NDa~aL~~AdVGIamgi~gt~vak~~aDivl~~~~f~~i~~~i~~ 802 (1039)
....+|...++.+.+..| +-|+++|||.||.+|++.|++||||+ ++.+.+|+.||++...++..+|..+++.
T Consensus 147 ~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~-na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 147 NRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp ETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHCCCHHHEEEECCCCCHHHHHHHCCEEEEEC-CCCHHHHHHCCEEECCCCCCHHHHHHHH
T ss_conf 87652278999876651002302256448843599999779089988-9759999849999898984889999998
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.10 E-value=8.7e-10 Score=85.46 Aligned_cols=73 Identities=25% Similarity=0.323 Sum_probs=61.8
Q ss_pred ECCHH--HHHHHHHHHHHCCC---CEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHCCCEEEECCCCHHHHHHHHH
Q ss_conf 62941--19999999852089---8999993995698876208923530688728888414888604990389999999
Q 001638 729 RSSPT--DKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARW 802 (1039)
Q Consensus 729 r~sP~--~K~~lV~~l~~~~g---~vVa~iGDG~NDa~aL~~AdVGIamgi~gt~vak~~aDivl~~~~f~~i~~~i~~ 802 (1039)
...|. +|...++.+.+..| +.|+++|||.||.+||+.|+.|+||+ ++++.+|+.||++..+++-.+|..++++
T Consensus 206 di~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~-na~~~~k~~A~~v~~~~~~~Gv~~~l~~ 283 (285)
T d1nrwa_ 206 ELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 283 (285)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCEEEEEC-CCCHHHHHHCCEECCCCCCCHHHHHHHH
T ss_conf 99555402366898877650557204999929788899998489189968-9989999858988278875589999998
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.10 E-value=4.7e-10 Score=87.46 Aligned_cols=72 Identities=25% Similarity=0.242 Sum_probs=60.9
Q ss_pred ECCH--HHHHHHHHHHHHCCC---CEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHCCCEEEECCCCHHHHHHHH
Q ss_conf 6294--119999999852089---899999399569887620892353068872888841488860499038999999
Q 001638 729 RSSP--TDKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 729 r~sP--~~K~~lV~~l~~~~g---~vVa~iGDG~NDa~aL~~AdVGIamgi~gt~vak~~aDivl~~~~f~~i~~~i~ 801 (1039)
..+| .+|..-++.+.++.| +-|.++|||.||.|||+.|+.|+||+ ++.+.+|+.|++++.+++-.++..+++
T Consensus 183 di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~-Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 183 DLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp EEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEECCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCEEEEEC-CCCHHHHHHCCEECCCCCCCHHHHHHH
T ss_conf 88458657778888776650214241899908844199998589189958-998999984788818898459999999
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.09 E-value=3e-10 Score=88.86 Aligned_cols=68 Identities=21% Similarity=0.253 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHCCC---CEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHCCCEEEECCCCHHHHHHHH
Q ss_conf 119999999852089---899999399569887620892353068872888841488860499038999999
Q 001638 733 TDKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 733 ~~K~~lV~~l~~~~g---~vVa~iGDG~NDa~aL~~AdVGIamgi~gt~vak~~aDivl~~~~f~~i~~~i~ 801 (1039)
.+|...++.+.+..+ ..++++|||.||.+||+.|+.|+||+ ++.+..|+.|++++..++-.++..+++
T Consensus 196 ~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~-na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 196 VNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CCCCCCCCEEHHHCCCCHHCEEEEECCHHHHHHHHHCCCEEEEC-CCCHHHHHHCCEECCCCCCCHHHHHHH
T ss_conf 87654200001100114201799918676799998589189967-987999985898838898583999999
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.02 E-value=2.9e-09 Score=81.65 Aligned_cols=70 Identities=21% Similarity=0.303 Sum_probs=55.8
Q ss_pred CHHHHHHHHHHHHHCCC---CEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHCCCEEEECC-CCHHHHHHHH
Q ss_conf 94119999999852089---89999939956988762089235306887288884148886049-9038999999
Q 001638 731 SPTDKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDD-NFTTIVTVAR 801 (1039)
Q Consensus 731 sP~~K~~lV~~l~~~~g---~vVa~iGDG~NDa~aL~~AdVGIamgi~gt~vak~~aDivl~~~-~f~~i~~~i~ 801 (1039)
.-..|...++.+.+..+ +.|+++|||.||.+||+.|+.|+||+ ++.+.+|+.||+++..+ +-.++..+++
T Consensus 204 ~~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~-na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 204 LGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCEEEEC-CCCHHHHHHCCEEECCCCCCCHHHHHHH
T ss_conf 7650577888776641002020799648763699998589189968-9989999848999998488869999999
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.00 E-value=3.9e-09 Score=80.70 Aligned_cols=71 Identities=28% Similarity=0.365 Sum_probs=59.8
Q ss_pred CCH--HHHHHHHHHHHHCCC---CEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHCCCEEEECCCCHHHHHHHH
Q ss_conf 294--119999999852089---899999399569887620892353068872888841488860499038999999
Q 001638 730 SSP--TDKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 730 ~sP--~~K~~lV~~l~~~~g---~vVa~iGDG~NDa~aL~~AdVGIamgi~gt~vak~~aDivl~~~~f~~i~~~i~ 801 (1039)
.+| .+|...++.+.+..| .-|+++|||.||.|||+.|++|+||+ ++.+.+|+.||+++.+++-.++..+++
T Consensus 184 i~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~-na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 184 IVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp EECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCEEEEC-CCCHHHHHHCCEECCCCCCCHHHHHHH
T ss_conf 5587775167899998860368220899808844099998689089948-998999985898858887538999999
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.99 E-value=7.3e-10 Score=86.03 Aligned_cols=69 Identities=28% Similarity=0.319 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHCCC---CEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHCCCEEEECCCCHHHHHHHHH
Q ss_conf 119999999852089---8999993995698876208923530688728888414888604990389999999
Q 001638 733 TDKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARW 802 (1039)
Q Consensus 733 ~~K~~lV~~l~~~~g---~vVa~iGDG~NDa~aL~~AdVGIamgi~gt~vak~~aDivl~~~~f~~i~~~i~~ 802 (1039)
.+|...++.+.+++| +.++++|||.||.+||+.|+.|+||+ +|++.+|+.||++..+++-.++..+++.
T Consensus 185 ~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~-na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 185 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHCCEEEEEC-CCCHHHHHHCCEEECCCCCCHHHHHHHH
T ss_conf 99999999998732235755167658855599998489089958-9989999847978088875689999998
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.94 E-value=2.4e-09 Score=82.27 Aligned_cols=132 Identities=20% Similarity=0.276 Sum_probs=91.4
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCHHHHH
Q ss_conf 99911799999999789979998789999999999991997799711317322348988998432651499962941199
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lr~~v~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~ 736 (1039)
+++|++.+.++.|++.|+++.++||.....+..+++.+||.... ++ +.++....+........ ......+..|.
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~--v~-an~~~~~~~G~~~g~~~---~~p~~~~~~K~ 155 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VF-ANRLKFYFNGEYAGFDE---TQPTAESGGKG 155 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EE-EECEEECTTSCEEEECT---TSGGGSTTHHH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCC--EE-EEEEEEEEHHCCCCCEE---EEEEECCCHHH
T ss_conf 04777999999997379979998999358888889870996100--36-65532220000036422---24652422089
Q ss_pred HHHHHHHHCCC-CEEEEECCCCCCHHHHHHCCCCEEECC-CCCHHHHHCCCEEEECCCCHHH
Q ss_conf 99999852089-899999399569887620892353068-8728888414888604990389
Q 001638 737 ILVTQLRNVFK-EVVAVTGNGTNDAPALHEADIGLAMGI-AGTEVAKENADVIIMDDNFTTI 796 (1039)
Q Consensus 737 ~lV~~l~~~~g-~vVa~iGDG~NDa~aL~~AdVGIamgi-~gt~vak~~aDivl~~~~f~~i 796 (1039)
.+++.+++..+ +.+.++|||.||.+|++.|++++|++- ...+..++.+|+++.+ |..+
T Consensus 156 ~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~--f~el 215 (217)
T d1nnla_ 156 KVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD--FVEL 215 (217)
T ss_dssp HHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC--GGGG
T ss_pred HHHHHHHHCCCCCCCEEEEECHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCEECC--HHHH
T ss_conf 99999986348666389971786599898689219979877789999868998689--8884
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.93 E-value=4.6e-09 Score=80.12 Aligned_cols=101 Identities=17% Similarity=0.200 Sum_probs=84.2
Q ss_pred HHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHH
Q ss_conf 99999997899799987899999999999919977997113173223489889984326514999629411999999985
Q 001638 664 EAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLR 743 (1039)
Q Consensus 664 ~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~l~ 743 (1039)
.+|+.++..|+.+.++||+....+...++++++.. ++... .+|...++.+.
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~---------------------------~~~~~--~~K~~~l~~~~ 89 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL---------------------------FFLGK--LEKETACFDLM 89 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------EEESC--SCHHHHHHHHH
T ss_pred HHHHHHHHHCEEEEEECCCCHHHHHHHHHHHCCCC---------------------------CCCCC--CCHHHHHHHHH
T ss_conf 88878765217899966984467899876321220---------------------------11013--63888999999
Q ss_pred HCCC---CEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHCCCEEEECCCCH
Q ss_conf 2089---89999939956988762089235306887288884148886049903
Q 001638 744 NVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFT 794 (1039)
Q Consensus 744 ~~~g---~vVa~iGDG~NDa~aL~~AdVGIamgi~gt~vak~~aDivl~~~~f~ 794 (1039)
++.+ +.|+++||+.||.|||+.|++|+||+ ++.+.+|+.||+|+..+.=.
T Consensus 90 ~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~-nA~~~vk~~A~~Vt~~~GG~ 142 (177)
T d1k1ea_ 90 KQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGK 142 (177)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTT
T ss_pred HHHCCCCCEEEEECCCCCHHHHHHHCCEEEECC-CCCHHHHHHCCEEECCCCCC
T ss_conf 986677522577058840789996689289848-86499998589991788997
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.93 E-value=2.2e-09 Score=82.53 Aligned_cols=146 Identities=13% Similarity=0.056 Sum_probs=105.2
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCC---CCEEECCCCCCCCHHHHHHHCCCCEEEEECCHH
Q ss_conf 99911799999999789979998789999999999991997799---711317322348988998432651499962941
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG---GLAIEGTDFRSKNPQEMQELIPKLQVMARSSPT 733 (1039)
Q Consensus 657 ~lr~~v~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~---~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~ 733 (1039)
+++|++.+.++.|++.|+++.++|+.....+..+.+++|+...- ....++...... .........+..+|.
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~------~~~~~~~~~~~~k~~ 148 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHID------WPHSCKGTCSNQCGC 148 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEE------CTTCCCTTCCSCCSS
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEC------CCCCCCCCCCCCCHH
T ss_conf 42499999999998542531157753066699999980995014543479828810220------101354325567899
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCEEECCCCCHHH-HHCCCEEEECCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 19999999852089899999399569887620892353068872888-8414888604990389999999689989899
Q 001638 734 DKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVA-KENADVIIMDDNFTTIVTVARWGRSVYINIQ 811 (1039)
Q Consensus 734 ~K~~lV~~l~~~~g~vVa~iGDG~NDa~aL~~AdVGIamgi~gt~va-k~~aDivl~~~~f~~i~~~i~~gR~~~~nI~ 811 (1039)
.|..+++.++.. ++.|.++||+.||.+|+++||+++|++ ...+.+ ++..++.. -++|..|...++.-..+.+.|+
T Consensus 149 ~~~~~~~~~~~~-~~~~i~iGDs~~Dl~~a~~A~~~~a~~-~~~~~~~~~~~~~~~-~~d~~~i~~~l~~~~~~~~~~~ 224 (226)
T d2feaa1 149 CKPSVIHELSEP-NQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLP-YQDFYEIRKEIENVKEVQEWLQ 224 (226)
T ss_dssp CHHHHHHHHCCT-TCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEEC-CSSHHHHHHHHHTSHHHHHHHT
T ss_pred HHHHHHHHHCCC-CCEEEEEECCHHHHHHHHHCCEEEEEC-CHHHHHHHCCCCEEE-CCCHHHHHHHHHHHHHHHHHHH
T ss_conf 999999984678-863899807631399999889978706-467999982998362-4999999999999878999854
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.81 E-value=3.1e-08 Score=74.01 Aligned_cols=130 Identities=16% Similarity=0.121 Sum_probs=95.2
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCHHHHH
Q ss_conf 99911799999999789979998789999999999991997799711317322348988998432651499962941199
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lr~~v~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~ 736 (1039)
+..++....++.+ +.+.+...+++.............++........+.... ..........+..+.
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------------~~~~~~~~~~~~~~~ 135 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDS------------DRVVGYQLRQKDPKR 135 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTT------------SCEEEEECCSSSHHH
T ss_pred CCCCHHHHHHHHH-HCCCEEEEECCCCHHHHHHHHHHHCCCHHHCCEEEEECC------------CCCCCCCCCCHHHHH
T ss_conf 5562488999886-047468885167138888999984783333110256214------------445432112014578
Q ss_pred HHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHCCCEEEECCCCHHHHHHHHH
Q ss_conf 999998520898999993995698876208923530688728888414888604990389999999
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARW 802 (1039)
Q Consensus 737 ~lV~~l~~~~g~vVa~iGDG~NDa~aL~~AdVGIamgi~gt~vak~~aDivl~~~~f~~i~~~i~~ 802 (1039)
..++.++.. .+.|+++|||.||.+||+.|++||||+ +..++.++++|++..+ ++..++..+..
T Consensus 136 ~~~~~~~i~-~~eviaiGDg~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~~-~~~d~~~~~~~ 198 (206)
T d1rkua_ 136 QSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAVH-TYEDLKREFLK 198 (206)
T ss_dssp HHHHHHHHT-TCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEEC-SHHHHHHHHHH
T ss_pred HHHHHHCCC-CCCEEEECCCCCCHHHHHHCCCCEEEC-CCHHHHHHCCCCEEEC-CHHHHHHHHHH
T ss_conf 899986425-652188438732799998589409978-9779998678955626-88999999999
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.68 E-value=6.9e-08 Score=71.45 Aligned_cols=54 Identities=20% Similarity=0.177 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHH----CCCCEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHCCCEE
Q ss_conf 119999999852----0898999993995698876208923530688728888414888
Q 001638 733 TDKYILVTQLRN----VFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVI 787 (1039)
Q Consensus 733 ~~K~~lV~~l~~----~~g~vVa~iGDG~NDa~aL~~AdVGIamgi~gt~vak~~aDiv 787 (1039)
..|..-++.+.+ ...+.++++|||.||.+||+.|+.|++|| ++++..++.+|.+
T Consensus 178 ~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~~-Na~~~~~~~~~~i 235 (243)
T d1wzca1 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVG-SLKHKKAQNVSSI 235 (243)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEES-SCCCTTCEEESCH
T ss_pred HCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCCEEEEC-CCCHHHHHHHHHH
T ss_conf 100779999999835999141999849885899998499389927-9986887023188
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.66 E-value=4.8e-08 Score=72.63 Aligned_cols=131 Identities=18% Similarity=0.197 Sum_probs=91.6
Q ss_pred CCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEE--CCH
Q ss_conf 599991179999999978997999878999999999999199779971131732234898899843265149996--294
Q 001638 655 KDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMAR--SSP 732 (1039)
Q Consensus 655 ~D~lr~~v~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar--~sP 732 (1039)
..++.+++.+.++.++..|..+.++||.....+....++.++.......+...+... ...... ..+
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~ 140 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKL------------TGDVEGEVLKE 140 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEE------------EEEEECSSCST
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCC------------CCCCCCCCCCC
T ss_conf 000135599999999974987876326542222302220320466654421101222------------12333211112
Q ss_pred HHHHHHHHHH----HHCCCCEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHCCCEEEECCCCHHHHHHH
Q ss_conf 1199999998----5208989999939956988762089235306887288884148886049903899999
Q 001638 733 TDKYILVTQL----RNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVA 800 (1039)
Q Consensus 733 ~~K~~lV~~l----~~~~g~vVa~iGDG~NDa~aL~~AdVGIamgi~gt~vak~~aDivl~~~~f~~i~~~i 800 (1039)
..|...+..+ +-. .+.+.++|||.||.+|++.|++|+|| ++.+..++.||+++..+++..|...+
T Consensus 141 ~~~~~~~~~~~~~~~~~-~~~~i~iGDs~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 141 NAKGEILEKIAKIEGIN-LEDTVAVGDGANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp THHHHHHHHHHHHHTCC-GGGEEEEESSGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred CCCCCHHHHHHHHHCCC-CCCEEEECCCCCHHHHHHHCCCCEEE--CCCHHHHHHCCEEECCCCHHHHHHHH
T ss_conf 34541033578884666-55417863784749999988987899--98999997499999179999999986
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.65 E-value=1.6e-07 Score=68.70 Aligned_cols=72 Identities=13% Similarity=0.079 Sum_probs=57.4
Q ss_pred CCHHHHHHHHHHHHHCCC---CEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHCCC-------EEEECCCCHHHHHH
Q ss_conf 294119999999852089---89999939956988762089235306887288884148-------88604990389999
Q 001638 730 SSPTDKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENAD-------VIIMDDNFTTIVTV 799 (1039)
Q Consensus 730 ~sP~~K~~lV~~l~~~~g---~vVa~iGDG~NDa~aL~~AdVGIamgi~gt~vak~~aD-------ivl~~~~f~~i~~~ 799 (1039)
....+|...++.+.+..| +.+.++|||.||.+||+.|+.|++|+ ++.+..|+.|| ++-..++..+|..+
T Consensus 158 ~~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~-na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~ 236 (244)
T d1s2oa1 158 PQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEA 236 (244)
T ss_dssp ETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHH
T ss_pred ECCCCHHHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHCCCEEEEC-CCCHHHHHHHHCCCCCCEEECCCCCCCHHHHH
T ss_conf 67641557788887741577303799758887799996189189967-99999999863236665377189971489999
Q ss_pred HHH
Q ss_conf 999
Q 001638 800 ARW 802 (1039)
Q Consensus 800 i~~ 802 (1039)
+++
T Consensus 237 l~~ 239 (244)
T d1s2oa1 237 IAH 239 (244)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 998
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.54 E-value=1.6e-06 Score=61.37 Aligned_cols=43 Identities=21% Similarity=0.202 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHC------CCCEEEEECCCCCCHHHHHHCCCCEEECCCC
Q ss_conf 1199999998520------8989999939956988762089235306887
Q 001638 733 TDKYILVTQLRNV------FKEVVAVTGNGTNDAPALHEADIGLAMGIAG 776 (1039)
Q Consensus 733 ~~K~~lV~~l~~~------~g~vVa~iGDG~NDa~aL~~AdVGIamgi~g 776 (1039)
..|..-++.+.+. ..+.++++|||.||.+||+.|++||+|. ++
T Consensus 183 ~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~~vaV~-n~ 231 (232)
T d1xvia_ 183 AGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVK-GL 231 (232)
T ss_dssp CCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECC-CC
T ss_pred CHHHHHHHHHHHHHHHCCCCHHCEEEECCCHHHHHHHHHCCEEEEEE-CC
T ss_conf 51789999999999975989521999849786899998199089971-89
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.94 E-value=3.5e-06 Score=58.84 Aligned_cols=56 Identities=16% Similarity=0.243 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECC----CCCCHHHHHHCC-CCEEECCCCCHHHHHCCCEEE
Q ss_conf 411999999985208989999939----956988762089-235306887288884148886
Q 001638 732 PTDKYILVTQLRNVFKEVVAVTGN----GTNDAPALHEAD-IGLAMGIAGTEVAKENADVII 788 (1039)
Q Consensus 732 P~~K~~lV~~l~~~~g~vVa~iGD----G~NDa~aL~~Ad-VGIamgi~gt~vak~~aDivl 788 (1039)
--+|...++.|.+...+-|.++|| |.||.+||+.|. .|+||+ ++.|.+|..+|+++
T Consensus 183 ~vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~~~~k~~~~~~~ 243 (244)
T d2fuea1 183 GWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFF 243 (244)
T ss_dssp TCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHC
T ss_pred HCCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHHCCCCCEEECC-CHHHHHHHHHHHCC
T ss_conf 20278999999669844599986889999972999971798589918-98999999998619
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.73 E-value=7.8e-05 Score=48.90 Aligned_cols=62 Identities=16% Similarity=0.331 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHCCCEEEECCCCHHHHHHH
Q ss_conf 411999999985208989999939956988762089235306887288884148886049903899999
Q 001638 732 PTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVA 800 (1039)
Q Consensus 732 P~~K~~lV~~l~~~~g~vVa~iGDG~NDa~aL~~AdVGIamgi~gt~vak~~aDivl~~~~f~~i~~~i 800 (1039)
-.+|...++.|.+. .+ ++++||+.||.+||+.|+-|++|+ .|. ++.+|++.+.+ ...+..++
T Consensus 157 g~~Kg~al~~l~~~-~~-~i~~GDs~ND~~Mf~~~~~~~av~-~g~--~~~~A~~~~~~--~~ev~~~l 218 (229)
T d1u02a_ 157 GVNKGSAIRSVRGE-RP-AIIAGDDATDEAAFEANDDALTIK-VGE--GETHAKFHVAD--YIEMRKIL 218 (229)
T ss_dssp TCCHHHHHHHHHTT-SC-EEEEESSHHHHHHHHTTTTSEEEE-ESS--SCCCCSEEESS--HHHHHHHH
T ss_pred CCCHHHHHHHHHCC-CC-CEEECCCCCHHHHHHCCCCEEEEE-ECC--CCCCCEEECCC--HHHHHHHH
T ss_conf 89889999997440-44-566438887099996028828999-689--87667287599--99999999
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.60 E-value=0.00054 Score=42.65 Aligned_cols=138 Identities=11% Similarity=0.120 Sum_probs=81.4
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEE-CCCCCCCCHHHHHHHCCCCEEEEECCHHH
Q ss_conf 99991179999999978997999878999999999999199779971131-73223489889984326514999629411
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIE-GTDFRSKNPQEMQELIPKLQVMARSSPTD 734 (1039)
Q Consensus 656 D~lr~~v~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~~~vi~-g~~~~~~~~~~~~~~~~~~~V~ar~sP~~ 734 (1039)
-++|||+++.++.|++.|+.+.++||--.....+++++.|+..++..++. .-+|..- .+..-+..- + .....
T Consensus 134 i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~---~~~~~~~~~-~---i~~~~ 206 (291)
T d2bdua1 134 VMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDEN---GVLKGFKGE-L---IHVFN 206 (291)
T ss_dssp CCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTT---SBEEEECSS-C---CCTTC
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEECC---EEEEECCCC-C---CCCCC
T ss_conf 8766389999999997497089985873999999999829986574699657997088---268603478-6---43456
Q ss_pred HHHHHH----HHHHC-CCCEEEEECCCCCCHHHHHH---CCCCEEECC-CCC-----HHHHHCCCEEEECCCCHHHHHHH
Q ss_conf 999999----98520-89899999399569887620---892353068-872-----88884148886049903899999
Q 001638 735 KYILVT----QLRNV-FKEVVAVTGNGTNDAPALHE---ADIGLAMGI-AGT-----EVAKENADVIIMDDNFTTIVTVA 800 (1039)
Q Consensus 735 K~~lV~----~l~~~-~g~vVa~iGDG~NDa~aL~~---AdVGIamgi-~gt-----~vak~~aDivl~~~~f~~i~~~i 800 (1039)
|...+. ..+.. ....|.++|||.||.+|.+. ++..++.|- +.. +--.++-|+|+.+|.-..++..+
T Consensus 207 K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~v~~~i 286 (291)
T d2bdua1 207 KHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSI 286 (291)
T ss_dssp HHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCHHHHHH
T ss_pred CCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHH
T ss_conf 86315445998853278676899967776899983885446324543137669987999876079788568784689999
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.51 E-value=0.00017 Score=46.40 Aligned_cols=126 Identities=17% Similarity=0.199 Sum_probs=84.0
Q ss_pred CCCCHHHHHHHHHHCC-CEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCHHHHH
Q ss_conf 9911799999999789-979998789999999999991997799711317322348988998432651499962941199
Q 001638 658 VRPGVREAVETCLAAG-ITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 658 lr~~v~~aI~~l~~aG-I~v~miTGD~~~ta~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~ 736 (1039)
+-||+.+.++.|++.| +++.++|+.....+..+.+..|+...-..++.+.+.... .-.|..-.
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~----------------k~~p~~~~ 155 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDR----------------NELPHIAL 155 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSG----------------GGHHHHHH
T ss_pred ECCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC----------------CCHHHHHH
T ss_conf 06852888765411231122355788500000123320122222222222334434----------------54157788
Q ss_pred HHHHHHHHC--CCCEEEEECCCCCCHHHHHHCCC---CEEECCCCCH-HHHHCCCEEEECCCCHHHHHHHH
Q ss_conf 999998520--89899999399569887620892---3530688728-88841488860499038999999
Q 001638 737 ILVTQLRNV--FKEVVAVTGNGTNDAPALHEADI---GLAMGIAGTE-VAKENADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 737 ~lV~~l~~~--~g~vVa~iGDG~NDa~aL~~AdV---GIamgi~gt~-vak~~aDivl~~~~f~~i~~~i~ 801 (1039)
..++.+... ..+.+.|+||+.+|..|-+.|++ +++.|....+ ..+..+|+++. +++.+..++.
T Consensus 156 ~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~--~~~el~~~l~ 224 (228)
T d2hcfa1 156 ERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETDEVLA 224 (228)
T ss_dssp HHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHHHHHH
T ss_pred HHHHHHCCCCCCHHHHEEECCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEEC--CHHHHHHHHH
T ss_conf 87653002487766802324872789999984997999807999988996589999989--9999999999
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.45 E-value=0.0004 Score=43.64 Aligned_cols=126 Identities=18% Similarity=0.199 Sum_probs=86.3
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCC-CCEEECCCCCCCCHHHHHHHCCCCEEEEECCHHHH
Q ss_conf 99911799999999789979998789999999999991997799-71131732234898899843265149996294119
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG-GLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK 735 (1039)
Q Consensus 657 ~lr~~v~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K 735 (1039)
++.|++.+.++.|++.|+++.++|+.+...+..+-+..|+..-. +.++.+.+.. .....|..-
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~----------------~~KP~p~~~ 162 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVP----------------AGRPYPWMC 162 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSS----------------CCTTSSHHH
T ss_pred CCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC----------------CCCCCHHHH
T ss_conf 3177579999998850244110179835668888998764012233445554322----------------234581778
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCC-EEECCCCC------H---------------------HHHHCCCEE
Q ss_conf 9999998520898999993995698876208923-53068872------8---------------------888414888
Q 001638 736 YILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG-LAMGIAGT------E---------------------VAKENADVI 787 (1039)
Q Consensus 736 ~~lV~~l~~~~g~vVa~iGDG~NDa~aL~~AdVG-Iamgi~gt------~---------------------vak~~aDiv 787 (1039)
....+.+.-...+.+.|+||..+|..+=+.|++- |++. .|. + ..+..+|++
T Consensus 163 ~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~v 241 (257)
T d1swva_ 163 YKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVI-LGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFT 241 (257)
T ss_dssp HHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEEC-TTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCEEEEEC-CCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 999999589876518999687340899998799899981-3777789898998627999999999999999974799899
Q ss_pred EECCCCHHHHHHHH
Q ss_conf 60499038999999
Q 001638 788 IMDDNFTTIVTVAR 801 (1039)
Q Consensus 788 l~~~~f~~i~~~i~ 801 (1039)
+- ++..+..+|.
T Consensus 242 i~--~l~eL~~ii~ 253 (257)
T d1swva_ 242 IE--TMQELESVME 253 (257)
T ss_dssp ES--SGGGHHHHHH
T ss_pred EC--CHHHHHHHHH
T ss_conf 87--9999999999
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.44 E-value=0.00029 Score=44.68 Aligned_cols=120 Identities=17% Similarity=0.198 Sum_probs=82.3
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCHHHHH
Q ss_conf 99911799999999789979998789999999999991997799711317322348988998432651499962941199
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lr~~v~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~ 736 (1039)
++.|++.++++.|+++|+++.++|+.+...+..+.+..|+...-..++.+.+... +...|+--.
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~~----------------~Kp~~~~~~ 151 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPY----------------SKPHPQVYL 151 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSC----------------CTTSTHHHH
T ss_pred CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----------------CHHHHHHHH
T ss_conf 4563279998875403455221332100011122222233322222223232221----------------014578999
Q ss_pred HHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCEEECCCCC----HHHHHCCCEEEECCCCHHH
Q ss_conf 99999852089899999399569887620892353068872----8888414888604990389
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGT----EVAKENADVIIMDDNFTTI 796 (1039)
Q Consensus 737 ~lV~~l~~~~g~vVa~iGDG~NDa~aL~~AdVGIamgi~gt----~vak~~aDivl~~~~f~~i 796 (1039)
...+.+.-. .+.++++||+.+|..|-+.|++... ++.+. +.....+|+++.+ +..+
T Consensus 152 ~~~~~l~~~-~~~~l~igD~~~di~aA~~~G~~~i-~v~~~~~~~~~~~~~a~~~i~~--l~el 211 (218)
T d1te2a_ 152 DCAAKLGVD-PLTCVALEDSVNGMIASKAARMRSI-VVPAPEAQNDPRFVLANVKLSS--LTEL 211 (218)
T ss_dssp HHHHHHTSC-GGGEEEEESSHHHHHHHHHTTCEEE-ECCCTTTTTCGGGGGSSEECSC--GGGC
T ss_pred HHHHHCCCC-CHHCEEEEECHHHHHHHHHCCCEEE-EECCCCCCCCHHHCCCCEEECC--HHHC
T ss_conf 999972999-5130899609899999998399799-9899877666223589999899--2669
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.29 E-value=0.00025 Score=45.15 Aligned_cols=125 Identities=23% Similarity=0.347 Sum_probs=84.8
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCHHHHH
Q ss_conf 99911799999999789979998789999999999991997799711317322348988998432651499962941199
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lr~~v~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~ 736 (1039)
.+.|++.+.++.|++.|+++.++|+.....+..+.+++|+...-..++...+... ....|+--.
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~----------------~kp~p~~~~ 158 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPE----------------IKPHPAPFY 158 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSS----------------CTTSSHHHH
T ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCC----------------CCCCCHHHH
T ss_conf 1688999999998506874202134528899999986496342143112333454----------------432101357
Q ss_pred HHHHHHHHCCCCEEEEECCCCCCHHHHHHCCC---CEEECCC-CCHHHHHCCCEEEECCCCHHHHHHH
Q ss_conf 99999852089899999399569887620892---3530688-7288884148886049903899999
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADI---GLAMGIA-GTEVAKENADVIIMDDNFTTIVTVA 800 (1039)
Q Consensus 737 ~lV~~l~~~~g~vVa~iGDG~NDa~aL~~AdV---GIamgi~-gt~vak~~aDivl~~~~f~~i~~~i 800 (1039)
.+.+.++-. .+.+.|+||..+|..+-+.|++ ++..|-. ..+.....+|+++. ++..+..++
T Consensus 159 ~~~~~~~~~-~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~--~l~dL~~ii 223 (224)
T d2hsza1 159 YLCGKFGLY-PKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILKIT 223 (224)
T ss_dssp HHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGGGT
T ss_pred HHHHHHHHH-HHCCCHHCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCCCEEEC--CHHHHHHHH
T ss_conf 899886431-10020211769899999990995999917999834066669999989--999998863
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.84 E-value=0.00065 Score=42.09 Aligned_cols=51 Identities=18% Similarity=0.250 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECC----CCCCHHHHHHCC-CCEEECCCCCHHHHHCC
Q ss_conf 411999999985208989999939----956988762089-23530688728888414
Q 001638 732 PTDKYILVTQLRNVFKEVVAVTGN----GTNDAPALHEAD-IGLAMGIAGTEVAKENA 784 (1039)
Q Consensus 732 P~~K~~lV~~l~~~~g~vVa~iGD----G~NDa~aL~~Ad-VGIamgi~gt~vak~~a 784 (1039)
-.+|...++.|.+...+-|+++|| |.||.+||+.|+ .|++++ +..| .++.+
T Consensus 183 ~vsKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~-~~~~-~~~~~ 238 (243)
T d2amya1 183 GWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APED-TRRIC 238 (243)
T ss_dssp TCSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHH-HHHHH
T ss_pred CCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHCCCCCEEEEC-CHHH-HHHHH
T ss_conf 16789999998489936299986899999976999971597299907-9999-99999
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.84 E-value=0.005 Score=35.56 Aligned_cols=125 Identities=12% Similarity=0.121 Sum_probs=80.6
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCHHHHH
Q ss_conf 99911799999999789979998789999999999991997799711317322348988998432651499962941199
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lr~~v~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~ 736 (1039)
++.|++.++++.|+ +|+++.++|+........+.+.+|+...-..++...+.. .....|+-=.
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~----------------~~KP~~~~~~ 162 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAG----------------FFKPHPRIFE 162 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHT----------------BCTTSHHHHH
T ss_pred CCCCCHHHHHHHHH-CCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCC----------------CCCHHHHHHH
T ss_conf 51006999998764-037603662132211011101233221002233332222----------------3221357788
Q ss_pred HHHHHHHHCCCCEEEEECCC-CCCHHHHHHCCCCEEE-CC-CCCHHHHHCCCEEEECCCCHHHHHHHH
Q ss_conf 99999852089899999399-5698876208923530-68-872888841488860499038999999
Q 001638 737 ILVTQLRNVFKEVVAVTGNG-TNDAPALHEADIGLAM-GI-AGTEVAKENADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 737 ~lV~~l~~~~g~vVa~iGDG-~NDa~aL~~AdVGIam-gi-~gt~vak~~aDivl~~~~f~~i~~~i~ 801 (1039)
...+.+.-. ...+.++||. .+|..+-+.|++.... .- .......+.+|+++. ++..+..+++
T Consensus 163 ~~~~~l~~~-p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~ 227 (230)
T d1x42a1 163 LALKKAGVK-GEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVS--DLREVIKIVD 227 (230)
T ss_dssp HHHHHHTCC-GGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEES--STTHHHHHHH
T ss_pred HHHHHHCCC-CCCCCEEECCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEC--CHHHHHHHHH
T ss_conf 777640664-3126456217486799999859989998899987010458999988--9999999999
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.60 E-value=0.0022 Score=38.12 Aligned_cols=121 Identities=14% Similarity=0.090 Sum_probs=79.3
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCHHHHH
Q ss_conf 99911799999999789979998789999999999991997799711317322348988998432651499962941199
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lr~~v~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~ 736 (1039)
++.+++.+.++.++..+ ++.++|+.....++.+....|+...-..++.+.+. ....|.-..
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~~------------------~~~~p~~~~ 144 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPE------------------APHKADVIH 144 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSS------------------CCSHHHHHH
T ss_pred CCHHHHHHHHHHHHCCC-CHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC------------------CCCCCCCCC
T ss_conf 21068999875420134-10000233210115778750123320000222322------------------222333211
Q ss_pred HHHHHHHHCCCCEEEEECCCCCCHHHHHHCCC---CEEECCCCCH-HHHHCCCEEEECCCCHHHHHH
Q ss_conf 99999852089899999399569887620892---3530688728-888414888604990389999
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADI---GLAMGIAGTE-VAKENADVIIMDDNFTTIVTV 799 (1039)
Q Consensus 737 ~lV~~l~~~~g~vVa~iGDG~NDa~aL~~AdV---GIamgi~gt~-vak~~aDivl~~~~f~~i~~~ 799 (1039)
...+.++-. .+.+.|+||+.+|..|-+.|++ ++.-|....+ .....+|+++- ++..+...
T Consensus 145 ~~~~~~~~~-~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~--~l~el~~~ 208 (210)
T d2ah5a1 145 QALQTHQLA-PEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAH--KPLEVLAY 208 (210)
T ss_dssp HHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEES--STTHHHHH
T ss_pred HHHHHHHCC-CCCCEEECCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEEC--CHHHHHHH
T ss_conf 012332012-00164654777899999985993999857989977897689999989--99999998
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.32 E-value=0.0085 Score=33.81 Aligned_cols=117 Identities=16% Similarity=0.104 Sum_probs=77.1
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEC-CCCCCCCHHHHHHHCCCCEEEEECCHHH
Q ss_conf 999911799999999789979998789999999999991997799711317-3223489889984326514999629411
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEG-TDFRSKNPQEMQELIPKLQVMARSSPTD 734 (1039)
Q Consensus 656 D~lr~~v~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~~~vi~g-~~~~~~~~~~~~~~~~~~~V~ar~sP~~ 734 (1039)
-.+.|++.+.++.|++.|+++.++|+......+.....+|+..-....... .+. ......|+-
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~----------------~~~KP~p~~ 189 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTK----------------IGHKVESES 189 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGG----------------GCCTTCHHH
T ss_pred CCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCHHHHHCCEEECCC----------------CCCCCCCHH
T ss_conf 6668878999999864247544458984889999999728404332023330245----------------335778088
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCEEE----CCCCCHHHHHCCCEEEE
Q ss_conf 99999998520898999993995698876208923530----68872888841488860
Q 001638 735 KYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAM----GIAGTEVAKENADVIIM 789 (1039)
Q Consensus 735 K~~lV~~l~~~~g~vVa~iGDG~NDa~aL~~AdVGIam----gi~gt~vak~~aDivl~ 789 (1039)
=....+.+.-. .+.++|+||..+|+.+-++|++.... |..........++.++.
T Consensus 190 ~~~~~~~~~~~-p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~ 247 (253)
T d1zs9a1 190 YRKIADSIGCS-TNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 247 (253)
T ss_dssp HHHHHHHHTSC-GGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred HHHHHHHHCCC-CCCEEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCCEEC
T ss_conf 89999994899-67489994799999999985997999968998998634457881799
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.22 E-value=0.03 Score=29.76 Aligned_cols=135 Identities=15% Similarity=0.126 Sum_probs=73.2
Q ss_pred CCCCHHHHHHHHHHCCCEEEEECCCCHHHH---------------HHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCC
Q ss_conf 991179999999978997999878999999---------------99999919977997113173223489889984326
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTA---------------KAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIP 722 (1039)
Q Consensus 658 lr~~v~~aI~~l~~aGI~v~miTGD~~~ta---------------~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~ 722 (1039)
+-|++.++++.|+++|+++.++|....... .......|+.... ..+....-...... ..
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~cp~~p~~~~~~-----~~ 101 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDG-IYYCPHHPQGSVEE-----FR 101 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSE-EEEECCBTTCSSGG-----GB
T ss_pred ECCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-EEECCCCCCCCCCC-----CC
T ss_conf 8878999999986618416666422023556667876540101244555540134454-05655333466553-----33
Q ss_pred CCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCC--EEE--CCCCCHHHHHCCCEEEECCCCHHHHH
Q ss_conf 51499962941199999998520898999993995698876208923--530--68872888841488860499038999
Q 001638 723 KLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG--LAM--GIAGTEVAKENADVIIMDDNFTTIVT 798 (1039)
Q Consensus 723 ~~~V~ar~sP~~K~~lV~~l~~~~g~vVa~iGDG~NDa~aL~~AdVG--Iam--gi~gt~vak~~aDivl~~~~f~~i~~ 798 (1039)
....+..-.|.--....+.+.-. .+.+.|+||..+|..|=+.|+++ +.+ |..-.+.....||+++. ++..++.
T Consensus 102 ~~~~~rKP~p~m~~~~~~~~~i~-~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~--~l~dl~~ 178 (182)
T d2gmwa1 102 QVCDCRKPHPGMLLSARDYLHID-MAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN--SLADLPQ 178 (182)
T ss_dssp SCCSSSTTSCHHHHHHHHHHTBC-GGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES--CGGGHHH
T ss_pred CCCCCCCCCCCCCCCHHHHCCCC-CCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEC--CHHHHHH
T ss_conf 45555687432231012211655-34451227989999999982888479989997777210247988989--9999999
Q ss_pred HHH
Q ss_conf 999
Q 001638 799 VAR 801 (1039)
Q Consensus 799 ~i~ 801 (1039)
.++
T Consensus 179 ~ik 181 (182)
T d2gmwa1 179 AIK 181 (182)
T ss_dssp HHH
T ss_pred HHC
T ss_conf 963
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.11 E-value=0.0026 Score=37.63 Aligned_cols=119 Identities=18% Similarity=0.141 Sum_probs=74.7
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCHHHHH
Q ss_conf 99911799999999789979998789999999999991997799711317322348988998432651499962941199
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lr~~v~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~ 736 (1039)
++.|++.++++.|++.|+++.++|+... .+..+-+..|+...-..++...+.. .....|+--.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~~~~----------------~~Kp~~~~~~ 144 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGF----------------VRKPSPEAAT 144 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGGGCC----------------CCTTSSHHHH
T ss_pred CCCCHHHHHHHCCCCCCCCHHHHCCCCH-HHHHHHHHCCCCCCCCCCCCCCCCC----------------CCCHHHHHHH
T ss_conf 4563477654211022220022113510-3344333101221222222222344----------------3202578889
Q ss_pred HHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCEE-ECCCCCHHHHHCCCEEEECCCCHHHHHHH
Q ss_conf 99999852089899999399569887620892353-06887288884148886049903899999
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLA-MGIAGTEVAKENADVIIMDDNFTTIVTVA 800 (1039)
Q Consensus 737 ~lV~~l~~~~g~vVa~iGDG~NDa~aL~~AdVGIa-mgi~gt~vak~~aDivl~~~~f~~i~~~i 800 (1039)
.+.+.+.-. .+.+.|+||+.+|..+-+.|++... +. .+.. .+|..+. ++..+..++
T Consensus 145 ~~~~~~~~~-p~~~l~VgD~~~Di~~A~~~G~~~i~v~-~~~~----~~~~~~~--~~~dl~~l~ 201 (204)
T d2go7a1 145 YLLDKYQLN-SDNTYYIGDRTLDVEFAQNSGIQSINFL-ESTY----EGNHRIQ--ALADISRIF 201 (204)
T ss_dssp HHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEESS-CCSC----TTEEECS--STTHHHHHT
T ss_pred HHHHHHCCC-CCEEEEEECCHHHHHHHHHCCCEEEEEC-CCCC----CCCEECC--CHHHHHHHH
T ss_conf 999982999-7518999479899999998699699984-7999----9580048--998999986
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.84 E-value=0.026 Score=30.28 Aligned_cols=125 Identities=10% Similarity=0.124 Sum_probs=80.1
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCHHHHH
Q ss_conf 99911799999999789979998789999999999991997799711317322348988998432651499962941199
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lr~~v~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~ 736 (1039)
++.|++.+.++.|++ |+++.++|+.+.......-+.+|+...-..++.+.+... +.-+|+-=.
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~----------------~KP~p~~~~ 171 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKE----------------EKPAPSIFY 171 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSS----------------CTTCHHHHH
T ss_pred CCCCCHHHHHHHHHC-CCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC----------------CHHHHHHHH
T ss_conf 658348999998411-460688622320012333320222222222232222221----------------003332478
Q ss_pred HHHHHHHHCCCCEEEEECCCC-CCHHHHHHCCCCEEECCCCCH----HHHHCCCEEEECCCCHHHHHHHH
Q ss_conf 999998520898999993995-698876208923530688728----88841488860499038999999
Q 001638 737 ILVTQLRNVFKEVVAVTGNGT-NDAPALHEADIGLAMGIAGTE----VAKENADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 737 ~lV~~l~~~~g~vVa~iGDG~-NDa~aL~~AdVGIamgi~gt~----vak~~aDivl~~~~f~~i~~~i~ 801 (1039)
.+.+.+.-. .+.+.|+||.. +|..+-+.|++.-+..+++.. .....+|+++. ++..+..+++
T Consensus 172 ~~~~~~~~~-~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~--~l~eL~~ll~ 238 (247)
T d2gfha1 172 HCCDLLGVQ-PGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALLQ 238 (247)
T ss_dssp HHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHHH
T ss_pred HHHHHHHCC-HHHCCEECCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEC--CHHHHHHHHH
T ss_conf 899996028-775242035718679999983994999977998876433579998989--9999999999
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.80 E-value=0.018 Score=31.36 Aligned_cols=109 Identities=15% Similarity=0.104 Sum_probs=71.5
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCHHHHH
Q ss_conf 99911799999999789979998789999999999991997799711317322348988998432651499962941199
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lr~~v~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~ 736 (1039)
++.||+++.++.+++.|+++.++|+.+.... .+.+..|+...-..++.+.+... ....|+--.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~~~~~~~~----------------~KP~p~~~~ 141 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVVTSSSGFK----------------RKPNPESML 141 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEECGGGCCC----------------CTTSCHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCCCCCHH-HHHHHHCCCCCCCCCCCCCCCCC----------------CCCCHHHHH
T ss_conf 0244268888877764212233455762101-34554202212222122222345----------------688899999
Q ss_pred HHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHCCCE
Q ss_conf 99999852089899999399569887620892353068872888841488
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADV 786 (1039)
Q Consensus 737 ~lV~~l~~~~g~vVa~iGDG~NDa~aL~~AdVGIamgi~gt~vak~~aDi 786 (1039)
...+.+. -+.+.++||..+|..+-++|++-... .++.+..++..|+
T Consensus 142 ~~~~~~~---~~~~l~vgDs~~Di~aA~~aG~~~i~-v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 142 YLREKYQ---ISSGLVIGDRPIDIEAGQAAGLDTHL-FTSIVNLRQVLDI 187 (187)
T ss_dssp HHHHHTT---CSSEEEEESSHHHHHHHHHTTCEEEE-CSCHHHHHHHHTC
T ss_pred HHHHHCC---CCCEEEEECCHHHHHHHHHCCCEEEE-ECCCCCHHHHCCC
T ss_conf 9999849---99769990799999999985997999-9998874753579
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=95.76 E-value=0.0015 Score=39.46 Aligned_cols=121 Identities=11% Similarity=0.200 Sum_probs=79.6
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCHHHHH
Q ss_conf 99911799999999789979998789999999999991997799711317322348988998432651499962941199
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lr~~v~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~ 736 (1039)
++.|++.+.++.|+ +++++.++|+.....+..+.++.|+...-..++.+.+.. .....|+--.
T Consensus 82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~----------------~~KP~p~~~~ 144 (207)
T d2hdoa1 82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTP----------------KRKPDPLPLL 144 (207)
T ss_dssp EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSS----------------CCTTSSHHHH
T ss_pred CCCCCHHHHHHHHC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----------------CCHHHHHHHC
T ss_conf 34640344433201-455420002321111111112222222222222222222----------------2103444300
Q ss_pred HHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCEEE---CCCCCHHHHHCCCEEEECCCCHHHHH
Q ss_conf 999998520898999993995698876208923530---68872888841488860499038999
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAM---GIAGTEVAKENADVIIMDDNFTTIVT 798 (1039)
Q Consensus 737 ~lV~~l~~~~g~vVa~iGDG~NDa~aL~~AdVGIam---gi~gt~vak~~aDivl~~~~f~~i~~ 798 (1039)
...+.++-. .+.+.|+||+.+|..+-++|++.... | .......+.+|.++- ++..|.+
T Consensus 145 ~~~~~~~~~-~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~i~--~l~dll~ 205 (207)
T d2hdoa1 145 TALEKVNVA-PQNALFIGDSVSDEQTAQAANVDFGLAVWG-MDPNADHQKVAHRFQ--KPLDILE 205 (207)
T ss_dssp HHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEEGGG-CCTTGGGSCCSEEES--SGGGGGG
T ss_pred CCCCCEEEE-CCCEEEECCCHHHHHHHHHCCCEEEEEECC-CCCHHHHHHCCCEEC--CHHHHHH
T ss_conf 234210451-134068547787899999849929999358-897567653292748--9999985
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.92 E-value=0.057 Score=27.70 Aligned_cols=90 Identities=9% Similarity=-0.018 Sum_probs=60.5
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCC-HHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCHHHH
Q ss_conf 999117999999997899799987899-9999999999199779971131732234898899843265149996294119
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDN-IHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK 735 (1039)
Q Consensus 657 ~lr~~v~~aI~~l~~aGI~v~miTGD~-~~ta~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K 735 (1039)
++.|++.+.++.|++.|+++.++|+-+ ...++..-+..++...... +.....|..+
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~-----------------------~~~~~kp~~~ 102 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQ-----------------------REIYPGSKVT 102 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSE-----------------------EEESSSCHHH
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCHHCCCCCCCCEE-----------------------EECCCCCCHH
T ss_conf 60557999999999789948997356621010000000233332102-----------------------3226689769
Q ss_pred --HHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCE
Q ss_conf --99999985208989999939956988762089235
Q 001638 736 --YILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGL 770 (1039)
Q Consensus 736 --~~lV~~l~~~~g~vVa~iGDG~NDa~aL~~AdVGI 770 (1039)
..+.+.+.-. .+.+.|+||..+|..+-++|++-.
T Consensus 103 ~~~~~~~~~~~~-~~~~l~igD~~~di~aA~~aG~~~ 138 (164)
T d1u7pa_ 103 HFERLHHKTGVP-FSQMVFFDDENRNIIDVGRLGVTC 138 (164)
T ss_dssp HHHHHHHHHCCC-GGGEEEEESCHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHCCC-HHHEEEECCCHHHHHHHHHCCCEE
T ss_conf 999999996888-699798748787899999869979
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=94.39 E-value=0.015 Score=32.08 Aligned_cols=100 Identities=14% Similarity=0.119 Sum_probs=60.9
Q ss_pred CCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHH--CCCCEEEEE---
Q ss_conf 599991179999999978997999878999999999999199779971131732234898899843--265149996---
Q 001638 655 KDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQEL--IPKLQVMAR--- 729 (1039)
Q Consensus 655 ~D~lr~~v~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~--~~~~~V~ar--- 729 (1039)
++++.|++.+.++.++++|.++.++|+.+......+.+.++.. ....... ......+.+
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~----------------~~~~~~~~~~~~~~~~~~~~~ 97 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMT----------------RKWVEDIAGVPLVMQCQREQG 97 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHH----------------HHHHHHTTCCCCSEEEECCTT
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHH----------------HHHHHHCCCCCEEEEECCCCC
T ss_conf 0844878999999998444808999268578899999999997----------------501333579867986325555
Q ss_pred ---CCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCE
Q ss_conf ---29411999999985208989999939956988762089235
Q 001638 730 ---SSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGL 770 (1039)
Q Consensus 730 ---~sP~~K~~lV~~l~~~~g~vVa~iGDG~NDa~aL~~AdVGI 770 (1039)
..+.-|..+...+.....++++|+||...|+.|.+++++-.
T Consensus 98 ~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~ 141 (149)
T d1ltqa1 98 DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVEC 141 (149)
T ss_dssp CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred CCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCE
T ss_conf 66770487899999732577755999869789999999879968
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=94.29 E-value=0.12 Score=25.42 Aligned_cols=107 Identities=16% Similarity=0.264 Sum_probs=70.4
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCC
Q ss_conf 48901899999999939994101235607898348999970289997489980799991847899953233121599401
Q 001638 521 LGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAV 600 (1039)
Q Consensus 521 ~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~krmsviv~~~~~~~~~~~~KGa~e~Il~~C~~~~~~~g~~~ 600 (1039)
+.||..+|++++|++.+.... ......-....+|....+..++.+ . + ..+..|.+..+...... .|.
T Consensus 29 SeHPlakAIv~~Ak~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~--~--g--~~v~~G~~~~~~~~~~~----~g~-- 95 (136)
T d2a29a1 29 DETPEGRSIVILAKQRFNLRE-RDVQSLHATFVPFTAQSRMSGINI--D--N--RMIRKGSVDAIRRHVEA----NGG-- 95 (136)
T ss_dssp CCSHHHHHHHHHHHHHHCCCC-CCTTTTTCEEEEEETTTTEEEEEE--T--T--EEEEEECHHHHHHHHHH----HTC--
T ss_pred CCCHHHHHHHHHHHHHCCCCC-CCCCCCCCCCCCCCCCCCEEEEEE--C--C--EEEEECHHHHHHHHHHH----CCC--
T ss_conf 786689999999998558775-531101244445432342588987--8--9--79996678999999997----189--
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 39999999999999999470371778999756899876788888927622301359999
Q 001638 601 PISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVR 659 (1039)
Q Consensus 601 ~l~~~~~~~~~~~i~~~a~~glr~l~lAyk~i~~~~~~~~~~e~~l~llG~i~i~D~lr 659 (1039)
.++ ..+.+.++.++.+|..++.+| .|..++|++++.|+++
T Consensus 96 ~~~----~~~~~~~~~~~~~G~Tvv~Va---------------~d~~~~G~i~l~D~iK 135 (136)
T d2a29a1 96 HFP----TDVDQKVDQVARQGATPLVVV---------------EGSRVLGVIALKDIVK 135 (136)
T ss_dssp CCC----HHHHHHHHHHHHTTSEEEEEE---------------ETTEEEEEEEEEESSC
T ss_pred CCC----HHHHHHHHHHHHCCCEEEEEE---------------ECCEEEEEEEEEEECC
T ss_conf 880----999999999997798599999---------------9999999999983058
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=94.25 E-value=0.055 Score=27.82 Aligned_cols=124 Identities=8% Similarity=0.055 Sum_probs=82.9
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCHHHHH
Q ss_conf 99911799999999789979998789999999999991997799711317322348988998432651499962941199
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lr~~v~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~ 736 (1039)
.+.+++.+.++.+++.|+++.++|+-+...........|+....+.++...+.. .....|+-=.
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~----------------~~KP~p~~~~ 156 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQ----------------VYKPDNRVYE 156 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGT----------------CCTTSHHHHH
T ss_pred CCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCEEEEEEEE----------------CCCCHHHHHH
T ss_conf 212010789998875178577642117999999874114455321002221000----------------1450778899
Q ss_pred HHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCEEECC---CCCHHHHHCCCEEEECCCCHHHHHH
Q ss_conf 99999852089899999399569887620892353068---8728888414888604990389999
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGI---AGTEVAKENADVIIMDDNFTTIVTV 799 (1039)
Q Consensus 737 ~lV~~l~~~~g~vVa~iGDG~NDa~aL~~AdVGIamgi---~gt~vak~~aDivl~~~~f~~i~~~ 799 (1039)
...+.+.-. .+.++|+||..+|.-+=++|++--+.-. ...+.....+|+++. ++..+..+
T Consensus 157 ~~~~~~g~~-p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~--~l~el~~l 219 (220)
T d1zrna_ 157 LAEQALGLD-RSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVEL 219 (220)
T ss_dssp HHHHHHTSC-GGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHTT
T ss_pred HHHHHHCCC-CCEEEEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEC--CHHHHHHH
T ss_conf 999981778-7148998048376999998699799981799876433689999989--99999854
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=94.22 E-value=0.11 Score=25.52 Aligned_cols=72 Identities=15% Similarity=0.205 Sum_probs=41.5
Q ss_pred EEECCHH--HHHHHHHHHHHCCCCEEEEECCCC-CCHHHHHHCCC-CEEEC--CCCCHHHHHC---CCEEEECCCCHHHH
Q ss_conf 9962941--199999998520898999993995-69887620892-35306--8872888841---48886049903899
Q 001638 727 MARSSPT--DKYILVTQLRNVFKEVVAVTGNGT-NDAPALHEADI-GLAMG--IAGTEVAKEN---ADVIIMDDNFTTIV 797 (1039)
Q Consensus 727 ~ar~sP~--~K~~lV~~l~~~~g~vVa~iGDG~-NDa~aL~~AdV-GIamg--i~gt~vak~~---aDivl~~~~f~~i~ 797 (1039)
+....|. --....+.+.-. .+.++|+||.. +|..+-+.|++ ++.+. ....+....+ .|+++. ++..+.
T Consensus 181 ~~~~KP~p~~~~~a~~~l~~~-~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~--~l~eL~ 257 (261)
T d1vjra_ 181 LIAGKPNPLVVDVISEKFGVP-KERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFK--NLGELA 257 (261)
T ss_dssp EECSTTSTHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEES--SHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHCCC-CHHCCEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCEEEC--CHHHHH
T ss_conf 366799578888887664047-22110316871678999998799699989899987788636899989988--999999
Q ss_pred HHHH
Q ss_conf 9999
Q 001638 798 TVAR 801 (1039)
Q Consensus 798 ~~i~ 801 (1039)
.+++
T Consensus 258 ~~l~ 261 (261)
T d1vjra_ 258 KAVQ 261 (261)
T ss_dssp HHHC
T ss_pred HHHC
T ss_conf 9769
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.08 E-value=0.13 Score=25.13 Aligned_cols=139 Identities=19% Similarity=0.239 Sum_probs=92.2
Q ss_pred CCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCC--CH------------------HHH
Q ss_conf 9911799999999789979998789999999999991997799711317322348--98------------------899
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSK--NP------------------QEM 717 (1039)
Q Consensus 658 lr~~v~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~~~vi~g~~~~~~--~~------------------~~~ 717 (1039)
+-||+.++++.+++. ....++|-.-.+-.+++|+..|+.. ..--+-.+++.. .. +++
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~--e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel 158 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRG--ELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEEL 158 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCS--EEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred ECCCHHHHHHHHHHH-CCCEEEECCHHHHHHHHHHHCCCCC--EEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 268889999999864-8847985358999999985358874--0100234431247871779999887653037537788
Q ss_pred H-------------HHCCCCEEEEECCHHHHHHHHHHHHHCCC-CEEEEECCCCCCHHHHHHCCC--CEEECCCCCHHHH
Q ss_conf 8-------------43265149996294119999999852089-899999399569887620892--3530688728888
Q 001638 718 Q-------------ELIPKLQVMARSSPTDKYILVTQLRNVFK-EVVAVTGNGTNDAPALHEADI--GLAMGIAGTEVAK 781 (1039)
Q Consensus 718 ~-------------~~~~~~~V~ar~sP~~K~~lV~~l~~~~g-~vVa~iGDG~NDa~aL~~AdV--GIamgi~gt~vak 781 (1039)
. +++..+...+ -..|..+++..-...+ ...+++||++.|..||+.|.= |+|+.-+|.+-+-
T Consensus 159 ~e~~d~~f~~~e~~~i~e~Vk~VG---gg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal 235 (308)
T d1y8aa1 159 FRKLDELFSRSEVRKIVESVKAVG---AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYAL 235 (308)
T ss_dssp HHHHHHHHHSHHHHHHHHTCBCCC---HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHCCCC---CCHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf 999998713115766876402147---85167899863361269864123675332789999744798368856862444
Q ss_pred HCCCEEEECCCCHHHHHHHHH
Q ss_conf 414888604990389999999
Q 001638 782 ENADVIIMDDNFTTIVTVARW 802 (1039)
Q Consensus 782 ~~aDivl~~~~f~~i~~~i~~ 802 (1039)
..||+.+...+-..+..++..
T Consensus 236 ~eA~VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 236 KHADVVIISPTAMSEAKVIEL 256 (308)
T ss_dssp TTCSEEEECSSTHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHH
T ss_conf 534468966633578899999
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=93.65 E-value=0.082 Score=26.55 Aligned_cols=113 Identities=9% Similarity=0.111 Sum_probs=71.3
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCHHHH
Q ss_conf 99991179999999978997999878999999999999199779971131732234898899843265149996294119
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK 735 (1039)
Q Consensus 656 D~lr~~v~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K 735 (1039)
.++-|++.+.++.|++.|+++.++|+... +.......|+...-..++.+.+... ..-.|+-=
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~i~~~~~~~~----------------~KP~~~~~ 151 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFDAIADPAEVAA----------------SKPAPDIF 151 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCSEECCTTTSSS----------------CTTSTHHH
T ss_pred CCCCCCCEECCCCCCCCCCCEEEEEECCH--HHHHHHHHCCCCCCCCCCCCCCCCC----------------CCCCHHHH
T ss_conf 20258740102212224442489963231--3578876356643331111111111----------------23575888
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCC-CEEECCCCCHHHHHCCCEEEEC
Q ss_conf 999999852089899999399569887620892-3530688728888414888604
Q 001638 736 YILVTQLRNVFKEVVAVTGNGTNDAPALHEADI-GLAMGIAGTEVAKENADVIIMD 790 (1039)
Q Consensus 736 ~~lV~~l~~~~g~vVa~iGDG~NDa~aL~~AdV-GIamgi~gt~vak~~aDivl~~ 790 (1039)
....+.+.-. .+.+.|+||..+|..+-+.|++ .|.++ . ......++.++.+
T Consensus 152 ~~~l~~~~i~-~~~~l~VgD~~~di~~A~~aG~~~i~v~-~--~~~~~~~~~~~~~ 203 (221)
T d1o08a_ 152 IAAAHAVGVA-PSESIGLEDSQAGIQAIKDSGALPIGVG-R--PEDLGDDIVIVPD 203 (221)
T ss_dssp HHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEES-C--HHHHCSSSEEESS
T ss_pred HHHHHHCCCC-CCEEEEEECCHHHHHHHHHCCCEEEEEC-C--HHHCCCCCEECCC
T ss_conf 8889873988-7407999669888999998699899999-8--1124656477588
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=93.20 E-value=0.04 Score=28.86 Aligned_cols=86 Identities=16% Similarity=0.200 Sum_probs=60.7
Q ss_pred CCCCHHHHHHHHHHCCCEEEEECCCC----HHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEEC--C
Q ss_conf 99117999999997899799987899----99999999991997799711317322348988998432651499962--9
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDN----IHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARS--S 731 (1039)
Q Consensus 658 lr~~v~~aI~~l~~aGI~v~miTGD~----~~ta~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~--s 731 (1039)
+.|++.+.++.+++.|++|..+||+. ..|++.+.+.+|+...... ..++.+. .
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~---------------------~vll~~~~~~ 145 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMN---------------------PVIFAGDKPG 145 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBC---------------------CCEECCCCTT
T ss_pred CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCC---------------------CEEEECCCCC
T ss_conf 6624999999999759749999388456579999999987198745666---------------------3476179998
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCC
Q ss_conf 41199999998520898999993995698876208923
Q 001638 732 PTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 732 P~~K~~lV~~l~~~~g~vVa~iGDG~NDa~aL~~AdVG 769 (1039)
...|...++ ++ .++++.||..+|..+-++|++-
T Consensus 146 K~~rr~~Ik---~y--~I~l~~GD~l~Df~aA~eagi~ 178 (209)
T d2b82a1 146 QNTKSQWLQ---DK--NIRIFYGDSDNDITAARDVGAR 178 (209)
T ss_dssp CCCSHHHHH---HT--TEEEEEESSHHHHHHHHHTTCE
T ss_pred CHHHHHHHH---HC--CEEEEECCCHHHHHHHHHCCCC
T ss_conf 237999999---74--9689965988887679875998
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=92.93 E-value=0.028 Score=30.04 Aligned_cols=60 Identities=13% Similarity=0.102 Sum_probs=34.3
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCCCC-CHHHHHHCCC-CEEEC--CCCCH---HHHHCCCEEEEC
Q ss_conf 29411999999985208989999939956-9887620892-35306--88728---888414888604
Q 001638 730 SSPTDKYILVTQLRNVFKEVVAVTGNGTN-DAPALHEADI-GLAMG--IAGTE---VAKENADVIIMD 790 (1039)
Q Consensus 730 ~sP~~K~~lV~~l~~~~g~vVa~iGDG~N-Da~aL~~AdV-GIamg--i~gt~---vak~~aDivl~~ 790 (1039)
-.|+--..+.+.+.-. .+.+.|+||+.+ |..+-++|++ ++.+. +...+ .++..+|+++-+
T Consensus 181 P~~~~~~~~~~~~gi~-~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~s 247 (253)
T d1yv9a1 181 PKAIIMERAIAHLGVE-KEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDS 247 (253)
T ss_dssp TSHHHHHHHHHHHCSC-GGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESS
T ss_pred CCHHHHHHHHHHHCCC-CCCEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCEEECC
T ss_conf 3126787899984888-442378437827799999987998999898999978897368999789799
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=91.66 E-value=0.12 Score=25.35 Aligned_cols=107 Identities=13% Similarity=0.153 Sum_probs=66.7
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECC----CCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCH
Q ss_conf 9991179999999978997999878----999999999999199779971131732234898899843265149996294
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTG----DNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSP 732 (1039)
Q Consensus 657 ~lr~~v~~aI~~l~~aGI~v~miTG----D~~~ta~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP 732 (1039)
.+.|++.+.++.++++|+++.++|+ ......+......|+..--+.++.+.+.. ...-.|
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~----------------~~KP~p 160 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVG----------------MIKPEP 160 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHS----------------CCTTCH
T ss_pred CCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHCEEEEHHHCC----------------CCCCCH
T ss_conf 8880099999999865994577520111118999999987468075511100054413----------------779982
Q ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCC-CEEECCCCCHHHH
Q ss_conf 119999999852089899999399569887620892-3530688728888
Q 001638 733 TDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADI-GLAMGIAGTEVAK 781 (1039)
Q Consensus 733 ~~K~~lV~~l~~~~g~vVa~iGDG~NDa~aL~~AdV-GIamgi~gt~vak 781 (1039)
+--....+.++-. .+.+.|+||...|..+-++|++ +|-+. ++.+...
T Consensus 161 ~~~~~~~~~~~v~-p~~~l~IgD~~~Di~~A~~aG~~ti~V~-~~~~~~~ 208 (222)
T d1cr6a1 161 QIYNFLLDTLKAK-PNEVVFLDDFGSNLKPARDMGMVTILVH-NTASALR 208 (222)
T ss_dssp HHHHHHHHHHTSC-TTSEEEEESSSTTTHHHHHHTCEEEECC-SSSHHHH
T ss_pred HHHHHHHHHHCCC-CCEEEEEECCHHHHHHHHHCCCEEEEEC-CCCHHHH
T ss_conf 7777888872898-6328999779887999998599899989-9404899
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=91.32 E-value=0.19 Score=23.88 Aligned_cols=62 Identities=15% Similarity=0.193 Sum_probs=34.6
Q ss_pred EEECCHHHHHHHHHHHHHCCCCEEEEECCCCC-CHHHHHHCCC-CEEE--CCCCCHHHHH----CCCEEEEC
Q ss_conf 99629411999999985208989999939956-9887620892-3530--6887288884----14888604
Q 001638 727 MARSSPTDKYILVTQLRNVFKEVVAVTGNGTN-DAPALHEADI-GLAM--GIAGTEVAKE----NADVIIMD 790 (1039)
Q Consensus 727 ~ar~sP~~K~~lV~~l~~~~g~vVa~iGDG~N-Da~aL~~AdV-GIam--gi~gt~vak~----~aDivl~~ 790 (1039)
....+|+--....+.+.-. .+.++|+||+.+ |..+-++|++ +|.+ |. .++...+ .+|+++.+
T Consensus 174 ~~KP~p~~~~~a~~~lgi~-p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~-~~~~~l~~~~~~pd~i~~s 243 (250)
T d2c4na1 174 VGKPSPWIIRAALNKMQAH-SEETVIVGDNLRTDILAGFQAGLETILVLSGV-SSLDDIDSMPFRPSWIYPS 243 (250)
T ss_dssp CSTTSTHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCEEEEESSSS-CCGGGGSSCSSCCSEEESS
T ss_pred CCCCHHHHHHHHHHHHCCC-CHHEEEECCCHHHHHHHHHHCCCCEEEECCCC-CCHHHHHHCCCCCCEEECC
T ss_conf 1342046676666663278-03457846872779999998799899989999-9988997378999999899
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=88.54 E-value=0.47 Score=20.95 Aligned_cols=135 Identities=18% Similarity=0.148 Sum_probs=61.7
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCC--------HHHHHH-------HHHHCCCCCCCCCEEECCCCCCCCHHHHHHHC
Q ss_conf 999117999999997899799987899--------999999-------99991997799711317322348988998432
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDN--------IHTAKA-------IAKECGILTDGGLAIEGTDFRSKNPQEMQELI 721 (1039)
Q Consensus 657 ~lr~~v~~aI~~l~~aGI~v~miTGD~--------~~ta~a-------iA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~ 721 (1039)
.+-|++.++++.|+++|+++.++|.-. .....+ .-.+.|+..+. +.......... ....
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~--~~~~~~~~~~~----~~~~ 121 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDM--VLACAYHEAGV----GPLA 121 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSE--EEEECCCTTCC----STTC
T ss_pred EECCCHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE--EEEECCCCCCC----CCCC
T ss_conf 76344899999998629757986165432144542434444336777776641355325--88742464456----6421
Q ss_pred CCCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCC-EEECCCCCHHHHHCCCEEEEC-CCCHHHHHH
Q ss_conf 651499962941199999998520898999993995698876208923-530688728888414888604-990389999
Q 001638 722 PKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG-LAMGIAGTEVAKENADVIIMD-DNFTTIVTV 799 (1039)
Q Consensus 722 ~~~~V~ar~sP~~K~~lV~~l~~~~g~vVa~iGDG~NDa~aL~~AdVG-Iamgi~gt~vak~~aDivl~~-~~f~~i~~~ 799 (1039)
..-..+..-.|.--....+.+.-. .+.+.|+||..+|..+=+.|++. +.+. .|.... ..+..+.+ .++..+..+
T Consensus 122 ~~~~~~rKP~p~ml~~a~~~~~i~-~~~~~~VGD~~~Di~aA~~AGi~~i~v~-~g~~~~--~~~~~~~~~~~~~e~~dl 197 (209)
T d2o2xa1 122 IPDHPMRKPNPGMLVEAGKRLALD-LQRSLIVGDKLADMQAGKRAGLAQGWLV-DGEAAV--QPGFAIRPLRDSSELGDL 197 (209)
T ss_dssp CSSCTTSTTSCHHHHHHHHHHTCC-GGGCEEEESSHHHHHHHHHTTCSEEEEE-TCCCEE--ETTEEEEEESSHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCC-CCCEEEECCCHHHHHHHHHCCCCEEEEE-CCCCCC--CCCCCCCCCCCHHHHHHH
T ss_conf 236640243201566767773899-4126895797889999998799489994-899765--677554676305278799
Q ss_pred HH
Q ss_conf 99
Q 001638 800 AR 801 (1039)
Q Consensus 800 i~ 801 (1039)
+.
T Consensus 198 l~ 199 (209)
T d2o2xa1 198 LA 199 (209)
T ss_dssp HH
T ss_pred HH
T ss_conf 99
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=88.42 E-value=0.48 Score=20.89 Aligned_cols=125 Identities=11% Similarity=0.119 Sum_probs=80.2
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCHHHH
Q ss_conf 99991179999999978997999878999999999999199779971131732234898899843265149996294119
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK 735 (1039)
Q Consensus 656 D~lr~~v~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K 735 (1039)
.++.|++.++++.++ ++.+.++|..+...+...-...|+....+.++.+.+... ..-.|+-=
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~~----------------~KP~p~~f 153 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRV----------------FKPHPDSY 153 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTC----------------CTTSHHHH
T ss_pred CCCCHHHHHHHHHHH--HHCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC----------------CCCCHHHH
T ss_conf 663102367888875--301267741524778888753022222222232222234----------------68638999
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCEE-ECCCCCHH-------------------------HHHCCCEEEE
Q ss_conf 999999852089899999399569887620892353-06887288-------------------------8841488860
Q 001638 736 YILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLA-MGIAGTEV-------------------------AKENADVIIM 789 (1039)
Q Consensus 736 ~~lV~~l~~~~g~vVa~iGDG~NDa~aL~~AdVGIa-mgi~gt~v-------------------------ak~~aDivl~ 789 (1039)
...++.+.-. .+-+.++||..+|.-+=++|++.-. +.-.+.+. .....|+++.
T Consensus 154 ~~a~~~lg~~-p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~ 232 (245)
T d1qq5a_ 154 ALVEEVLGVT-PAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVP 232 (245)
T ss_dssp HHHHHHHCCC-GGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEES
T ss_pred HHHHHHHCCC-HHHEEEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEC
T ss_conf 9999991978-433899938999999999869929998478865422122444345401211000035542589999989
Q ss_pred CCCCHHHHHHHH
Q ss_conf 499038999999
Q 001638 790 DDNFTTIVTVAR 801 (1039)
Q Consensus 790 ~~~f~~i~~~i~ 801 (1039)
++..++.+++
T Consensus 233 --~l~el~~lv~ 242 (245)
T d1qq5a_ 233 --ALGDLPRLVR 242 (245)
T ss_dssp --SGGGHHHHHH
T ss_pred --CHHHHHHHHH
T ss_conf --9999999998
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=87.27 E-value=0.43 Score=21.24 Aligned_cols=64 Identities=14% Similarity=0.154 Sum_probs=39.2
Q ss_pred EEEECCHHHHHHHHHHHHHCCCCEEEEECCCCC-CHHHHHHCCC-CEEEC--CCCCHHHHHC---CCEEEEC
Q ss_conf 999629411999999985208989999939956-9887620892-35306--8872888841---4888604
Q 001638 726 VMARSSPTDKYILVTQLRNVFKEVVAVTGNGTN-DAPALHEADI-GLAMG--IAGTEVAKEN---ADVIIMD 790 (1039)
Q Consensus 726 V~ar~sP~~K~~lV~~l~~~~g~vVa~iGDG~N-Da~aL~~AdV-GIamg--i~gt~vak~~---aDivl~~ 790 (1039)
.++.-+|+--....+.+.-. .+.++|+||..+ |..+-++|++ ++.+. ....+...+. .|+++.+
T Consensus 177 ~~gKP~p~~~~~al~~l~i~-~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~s 247 (253)
T d1wvia_ 177 IIGKPEAVIMNKALDRLGVK-RHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSS 247 (253)
T ss_dssp ECSTTSHHHHHHHHHHHTSC-GGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESC
T ss_pred EECCCCCCCCEEHHHHCCCC-CCCEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCEEECC
T ss_conf 84167742001100110345-451699827807779999987997999898999978886368999889899
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.83 E-value=0.23 Score=23.19 Aligned_cols=100 Identities=12% Similarity=0.135 Sum_probs=57.6
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHH----HHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCH
Q ss_conf 9991179999999978997999878999999----999999199779971131732234898899843265149996294
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTA----KAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSP 732 (1039)
Q Consensus 657 ~lr~~v~~aI~~l~~aGI~v~miTGD~~~ta----~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP 732 (1039)
.+.|++.+.++.|++.|+++.++|+...... ...-...++......++...+.. ....+|
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~----------------~~KP~~ 162 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVG----------------MVKPEP 162 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHT----------------CCTTCH
T ss_pred CCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCEEEECCCCC----------------CCHHHH
T ss_conf 7880199999999863486334543412408999998765257386663899512233----------------430477
Q ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCC-CEEEC
Q ss_conf 119999999852089899999399569887620892-35306
Q 001638 733 TDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADI-GLAMG 773 (1039)
Q Consensus 733 ~~K~~lV~~l~~~~g~vVa~iGDG~NDa~aL~~AdV-GIamg 773 (1039)
+--....+.+.-. .+-+.|+||...|..+-++|++ +|.+.
T Consensus 163 ~~~~~~~~~~~~~-p~e~l~VgD~~~Di~~A~~~G~~ti~v~ 203 (225)
T d1zd3a1 163 QIYKFLLDTLKAS-PSEVVFLDDIGANLKPARDLGMVTILVQ 203 (225)
T ss_dssp HHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred HHHHHHHHHCCCC-CCCEEEEECCHHHHHHHHHCCCEEEEEC
T ss_conf 8888776301568-6510588168887999998699899989
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=83.15 E-value=0.84 Score=19.08 Aligned_cols=122 Identities=12% Similarity=0.150 Sum_probs=74.0
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCC-EEECCCCCCCCHHHHHHHCCCCEEEEECCHH--
Q ss_conf 9991179999999978997999878999999999999199779971-1317322348988998432651499962941--
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGL-AIEGTDFRSKNPQEMQELIPKLQVMARSSPT-- 733 (1039)
Q Consensus 657 ~lr~~v~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~~~-vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~-- 733 (1039)
.+.|++.+.++.++ .+..++|+-....+..+-..+|+...... +..+.+.. ..+..|.
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~~~~KP~~~ 145 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLG----------------ADRVKPKPD 145 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHC----------------TTCCTTSSH
T ss_pred CHHHHHHHHHHHCC---CCCEEEEECCHHHHHHHHCCCCCCCCCCEEECCCCCCC----------------CCCCCCCHH
T ss_conf 11345788765103---23225641204555554302344433210001232112----------------443445889
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCC-EEECCCCC--------HHHHHCCCEEEECCCCHHHHHHHH
Q ss_conf 199999998520898999993995698876208923-53068872--------888841488860499038999999
Q 001638 734 DKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG-LAMGIAGT--------EVAKENADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 734 ~K~~lV~~l~~~~g~vVa~iGDG~NDa~aL~~AdVG-Iamgi~gt--------~vak~~aDivl~~~~f~~i~~~i~ 801 (1039)
-=....+.+.-. .+.+.|+||..+|..+=+.|++- |.+. .|. +....-+|+++.+ +..+..++.
T Consensus 146 ~~~~~~~~l~~~-p~~~l~vgDs~~dv~aA~~aG~~~i~v~-~~~~~~~~~~~~l~~~~ad~vi~~--l~eL~~ll~ 218 (222)
T d2fdra1 146 IFLHGAAQFGVS-PDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVISR--MQDLPAVIA 218 (222)
T ss_dssp HHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEESC--GGGHHHHHH
T ss_pred HHHHHHHHHCCC-CCEEEEECCCHHHHHHHHHCCCEEEEEC-CCCCCCCCHHHHHHHCCCCEEECC--HHHHHHHHH
T ss_conf 998778750898-7328997587878999998499899983-698787531778976799999999--999999999
|