Citrus Sinensis ID: 001669

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030----

METGGGEDCCVKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQIGTHSFTFDHVYGSTGSPSSAMFDECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGYQTGIIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVRDLLDPPCLNKPDTANGHTGKVTVPGKPPIQIRETSNGVITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPIVNRDPMSTEMLKMRQQLEFLQAELCARGGGSSSDEVQVLKERIAWLEAANEDLCRELHEYRSRCTDVEQRETDAQDGSPCPLKSDGLKRSLNSIEQTDYQMGENITGDSREIDEVAKEWEHTLLQNSMDKELNELNRRLEEKESEMKLVGGSDTAALKQHFGKKIAELEDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDLKKKQENQVQLLKQKQKSDEAAKRLQDEIQFIKAQKVQLQHRIKQEAEQFRQWKASREKELLQLRKEGRRNEYERHKLQALNQRQKLVLQRKTEEAAMATKRLKELLESRKSSARENSAVTNGNLTNGQSNEKSFQRWLDHELEVMVNVHEVRFDYEKQSQVRAALAEELAVLKQVDEFASKGLSPPRGKNGFARVSSMSPNARMARISSLENMLSISSNSLVAMASQLSEAEERDRLFTNRGRWNQLRSMADAKNLLQYMFNSLADARCQLWEKDIEIKEMKEQLKELVGLLRQSEVRRKEVEEELKLREQAVAITLARSASGNLHNSLEHFADDTSGPPSPMSVPAQKQLKYTPGIANGSIRESAAFINQNRKRVPLGQLSMKKLAALGQGGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRHSDETIVRAKPRPRALPHAG

cccccccccccEEEEEccccccHHHHcccccEEEEEccccEEEEccccccccEEcccccccHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccccccccccccHHHHHHHHHHHHccccccEEEEEEEEEEEEccccccccccccccccccccccccccccccccccEEEccccccEEEccccEEEcccHHHHHHHHHHccccccHHcccccccccccccEEEEEEEEEccccccccccccccccccccEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHcccccccccEEEEEccccccHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHccccccccccccccHHHHHccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccHHHccccccEEccccccccccHHHHHHHcccccccccccccccccccc

ccccccccccEEEEEEEccccHHHHHccccEEEEEEccccEEEEcccEEEEEEEEccccccHHHHHHHHcHHHHHHHHcccEEEEEEEccccccHHHHHcEcccccccEcHHHHHHHHHHHHHHcccccEEEEEEEEEEEEEccEEEEcccccccccccccccccccccccccccccEEEEcccEEEEcccccEEcccHHHHHHHHHHHHHHHHHHHHHccccHHHcEEEEEEEEEEHHHcEEEEEEEEEEEEcccccEEEEEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccHHHcHHHHHHHHccccccEEEEEEEEccEHHHHHHHHHHHHHHHcccccEEEEccEEEccHHHHHHcHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHccHHccccccccccHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHcEHHEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccccccHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHccccccccccccccccHHHcccccccccccccccHHHHHHcccccccccccHHHHHHHcccccEEEEEcccccEEEEEEEEcccccHHHHHHHccccHHHccccccHHccccc

metgggedccVKVAVHvrpligderaqgckdcvavvpgkpqvqigthsftfdhvygstgspssamfdecIAPLVDGLFQGYNATVLAygqtgsgktytmgtgfkdgyqtgiIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVrdlldppclnkpdtanghtgkvtvpgkppiqiretsngvitlAGSTEVSVSSLKEMAACLEQgslsratgstnmnnqssrsHAIFTITLEQMrklspvslgdsspnesmnEEYLCAKLHLVDlagserakrtgsdglrfkegvhINRGLLALGNVISalgddkkrkegvhvpyrdskLTRLLQdslggnsrtVMIACispadinaEETLNTLKYANRarniqnkpivnrdpmSTEMLKMRQQLEFLQAELcargggsssdEVQVLKERIAWLEAANEDLCRELHEYRSrctdveqretdaqdgspcplksdglkrslNSIEQTdyqmgenitgdsREIDEVAKEWEHTLLQNSMDKELNELNRRLEEkesemklvggsdtAALKQHFGKKIAELEDEKRTVQKERDHLLTEIENlasnsdgqtqkLQDVHAHKLKSLEAQILDLKKKQENQVQLLKQKQKSDEAAKRLQDEIQFIKAQKVQLQHRIKQEAEQFRQWKASREKELLQLRKEGRRNEYERHKLQALNQRQKLVLQRKTEEAAMATKRLKELLESRKssarensavtngnltngqsnEKSFQRWLDHELEVMVNVHEVRFDYEKQSQVRAALAEELAVLKQVDEfaskglspprgkngfarvssmspnarMARISSLENMLSISSNSLVAMASQLSEAEERDRLFTNRGRWNQLRSMADAKNLLQYMFNSLADARCQLWEKDIEIKEMKEQLKELVGLLRQSEVRRKEVEEELKLREQAVAITLARsasgnlhnslehfaddtsgppspmsvpaqkqlkytpgiangsiRESAAFINqnrkrvplgqlSMKKLAALGQGGKLWRWKRSHHQWLLQFKwkwqkpwrlsewirhsdetivrakprpralphag

metgggedccvKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQIGTHSFTFDHVYGSTGSPSSAMFDECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGYQTGIIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVRDLLDPPCLNkpdtanghtgkvtvpgkppiqiretsngvitLAGSTEVSVSSLKEMAACLEQGSLsratgstnmnnqssrSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSerakrtgsdglrfkegvhINRGLLALGNVISalgddkkrkegvhvpyrdskltrllqdslggnsRTVMIACISPADINAEETLNTLKYanrarniqnkpivnrdpMSTEMLKMRQQLEFLQAELCARGGGSSSDEVQVLKERIAWLEAANEDLCRELHEYRSRCTDVEqretdaqdgspcplksdglkRSLNSIEQtdyqmgenitgDSREIDEVAKEWEHtllqnsmdkELNELNRRLEEKesemklvggsdtaALKQHFGKKiaeledekrTVQKERDHLLTEIEnlasnsdgqtqKLQDVHAHKLKSLEAQILDLKKKQENQVQLLKQKQKSDEAAKRLQDEIQFIKAQKVQLQHRIKQEAEQFRQWKASREKELLQLRKEGrrneyerhklqalnqrqklvLQRKTEEAAMATKRLKELlesrkssarensavtngnltngqsnEKSFQRWLDHELEVMVNVHEVRFDYEKQSQVRAALAEELAVLKQVDefaskglspprgkngfarvssmspnARMARISSLENMLSISSNSLVAMASQLSEAEERDRLFTNRGRWNQLRSMADAKNLLQYMFNSLADARCQLWEKDIEIKEMKEQLKELvgllrqsevrrKEVEEELKLREQAVAITLARSASGNLHNSLEHFADDTSGPPSPMSVPAQKQLKYTPGIANGSIRESAAFINQNRKRVPLGQLSMKKLAALGQGGKLWRWKRSHHQWLLQFkwkwqkpwrlsewirhsdetivrakprpralphag

METGGGEDCCVKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQIGTHSFTFDHVYGSTGSPSSAMFDECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGYQTGIIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVRDLLDPPCLNKPDTANGHTGKVTVPGKPPIQIRETSNGVITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPIVNRDPMSTEMLKMRQQLEFLQAELCARGGGSSSDEVQVLKERIAWLEAANEDLCRELHEYRSRCTDVEQRETDAQDGSPCPLKSDGLKRSLNSIEQTDYQMGENITGDSREIDEVAKEWEHTLLQNSMDkelnelnrrleekeSEMKLVGGSDTAALKQHFGKKIAELEDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDLKKKQENQVQLLKQKQKSDEAAKRLQDEIQFIKAQKVQLQHRIKQEAEQFRQWKASREKELLQLRKEGRRNEYERHKLQALNQRQKLVLQRKTEEAAMATKRLKELLESRKSSARENSAVTNGNLTNGQSNEKSFQRWLDHELEVMVNVHEVRFDYEKQSQVRaalaeelaVLKQVDEFASKGLSPPRGKNGFARVSSMSPNARMARISSLENMLSISSNSLVAMASQLSEAEERDRLFTNRGRWNQLRSMADAKNLLQYMFNSLADARCQLWEKDIEIKEMKEQLKELVGLLRQSevrrkeveeelklreQAVAITLARSASGNLHNSLEHFADDTSGPPSPMSVPAQKQLKYTPGIANGSIRESAAFINQNRKRVPLGQLSMKKLAALGQGGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRHSDETIVRAKPRPRALPHAG

*******DCCVKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQIGTHSFTFDHVYGSTGSPSSAMFDECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGYQTGIIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVRDLLDPPCL*****************************VITL*****************************************IFTIT************************YLCAKLHLVDLAG**********GLRFKEGVHINRGLLALGNVISALGDD*****GVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNI*********************LEFLQAELCAR********VQVLKERIAWLEAANEDLCRELHEYRS*****************************************************************************************************************************************************************************************FI******************************************************************************************************FQRWLDHELEVMVNVHEVRFDYEKQSQVRAALAEELAVLKQV**************************************************************FTNRGRWNQLRSMADAKNLLQYMFNSLADARCQLWEKDIEIKEMKEQLKELVGLL*********************AI**************************************************AAFINQNRKRVPLGQLSMKKLAALGQGGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRHSDETI**************

***********KVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQIGTHSFTFDHVYGSTGSPSSAMFDECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGYQTGIIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVRDLLDPPCLNKPDTAN*************IQIRETSNGVITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRK******************YLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPIVNRDPMSTEMLKMRQQLE****************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************SMADAKNLLQYMFN**************************************************************************************************************************************RWKRSHHQWLLQFKWKWQKPWRLSE***********************

********CCVKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQIGTHSFTFDHVYGSTGSPSSAMFDECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGYQTGIIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVRDLLDPPCLNKPDTANGHTGKVTVPGKPPIQIRETSNGVITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLS************MNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPIVNRDPMSTEMLKMRQQLEFLQAELCA*********VQVLKERIAWLEAANEDLCRELHEYRSRC***************CPLKSDGLKRSLNSIEQTDYQMGENITGDSREIDEVAKEWEHTLLQNSMDKELNELNRRLEEKESEMKLVGGSDTAALKQHFGKKIAELEDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDLKKKQEN****************RLQDEIQFIKA*********KQEAEQFRQWKASREKELLQLRKEGRRNEYERHKLQALNQRQKLVLQRKTEEAAMATKRLKELLE**********AVTNGNLTNGQSNEKSFQRWLDHELEVMVNVHEVRFDYEKQSQVRAALAEELAVLKQVDEFASKGLSPPRGKNGFARVSSMSPNARMARISSLENMLSISSNSLVAMASQLSEAEERDRLFTNRGRWNQLRSMADAKNLLQYMFNSLADARCQLWEKDIEIKEMKEQLKELVGLLRQSEVRRKEVEEELKLREQAVAITLARSASGNLHNSLEHFADDTSGPPSPMSVPAQKQLKYTPGIANGSIRESAAFINQNRKRVPLGQLSMKKLAALGQGGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRHSDETIVRAKPR********

********CCVKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQIGTHSFTFDHVYGSTGSPSSAMFDECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGYQTGIIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVRDLLDPP********************PPIQIRETSNGVITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAG***********LRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPIVNRDPMSTEMLKMRQQLEFLQAELCARGGGSSSDEVQVLKERIAWLEAANEDLCRELHEYRSRCTDVEQRETDAQDGSPCPLKSDGLKRS**SI*************DSREIDEVAKEWEHTLLQNSMDKELNELNRRLEEKESEMKLVGGSDTAALKQHFGKKIAELEDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDLKKKQENQVQLLKQKQKSDEAAKRLQDEIQFIKAQKVQLQHRIKQEAEQFRQWKASREKELLQLRKEGRRNEYERHKLQALNQRQKLVLQRKTEEAAMATKRLKELLESRKSSA***************SNEKSFQRWLDHELEVMVNVHEVRFDYEKQSQVRAALAEELAVLKQVDE*********************************ENMLSISSNSLVA**SQLSEAEERDRLFTNRGRWNQLRSMADAKNLLQYMFNSLADARCQLWEKDIEIKEMKEQLKELVGLLRQSEVRRKEVEEELKLREQAVAITLAR************************SVPAQKQLKYTPGIANGSIRESAAFINQNRKRVPLGQLSMKKLAALGQGGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRHS******************

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METGGGEDCCVKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQIGTHSFTFDHVYGSTGSPSSAMFDECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGYQTGIIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVRDLLDPPCLNKPDTANGHTGKVTVPGKPPIQIRETSNGVITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPIVNRDPMSTEMLKMRQQLEFLQAELCARGGGSSSDExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxETDAQDGSPCPLKSDGLKRSLNSIEQTDYQMGENITGDSREIDEVAKEWEHTLLxxxxxxxxxxxxxxxxxxxxxxxxxxxxDTAALxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxSDGQTQKLQDVHAHKxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxFRQWKASREKELLQLRKEGRRNEYERHKLQALNQRQKLVxxxxxxxxxxxxxxxxxxxxxRKSSARENSAVTNGNLTNGQSNEKSFQRWLDHELEVMVNVHEVRFDYEKQSQVRAALAEELAVLKQVDEFASKGLSPPRGKNGFARVSSMSPNARMARISSLENMLSISSNSLVAMASQLSEAEERDRLFTNRGRWNQLRSMADAKNLLQYMFNSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxVAITLARSASGNLHNSLEHFADDTSGPPSPMSVPAQKQLKYTPGIANGSIRESAAFINQNRKRVPLGQLSMKKLAALGQGGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRHSDETIVRAKPRPRALPHAG

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		1034	2.2.26 [Sep-21-2011]
O95239		1232	Chromosome-associated kin	yes	no	0.810	0.680	0.379	1e-147
P33174		1231	Chromosome-associated kin	yes	no	0.821	0.689	0.359	1e-144
Q2VIQ3		1234	Chromosome-associated kin	no	no	0.812	0.680	0.372	1e-140
Q91784		1226	Chromosome-associated kin	N/A	no	0.788	0.664	0.368	1e-140
Q90640		1225	Chromosome-associated kin	yes	no	0.771	0.651	0.374	1e-139
O75037		1637	Kinesin-like protein KIF2	no	no	0.371	0.234	0.501	1e-104
Q9QXL1		1668	Kinesin-like protein KIF2	no	no	0.372	0.230	0.494	1e-103
Q9QXL2		1672	Kinesin-like protein KIF2	no	no	0.362	0.224	0.5	1e-100
Q7Z4S6		1674	Kinesin-like protein KIF2	no	no	0.366	0.226	0.497	1e-99
Q86VH2		1401	Kinesin-like protein KIF2	no	no	0.374	0.276	0.437	1e-90

>sp\|O95239\|KIF4A_HUMAN Chromosome-associated kinesin KIF4A OS=Homo sapiens GN=KIF4A PE=1 SV=3	Back alignment and function desciption

 Score =  523 bits (1347), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 363/957 (37%), Positives = 529/957 (55%), Gaps = 119/957 (12%)

Query: 11  VKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQIGT-HSFTFDHVYGSTGSPSSAMFDEC 69
           V+VA+  RPL+  E ++GC+ C++ VPG+PQV +GT  SFT+D V+  + +    +F+  
Sbjct: 10  VRVALRCRPLVPKEISEGCQMCLSFVPGEPQVVVGTDKSFTYDFVFDPS-TEQEEVFNTA 68

Query: 70  IAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGF----KDGYQTGIIPLVMNVLFSKIET 125
           +APL+ G+F+GYNATVLAYGQTGSGKTY+MG  +    ++    G+IP V+ +LF +I+ 
Sbjct: 69  VAPLIKGVFKGYNATVLAYGQTGSGKTYSMGGAYTAEQENEPTVGVIPRVIQLLFKEIDK 128

Query: 126 LKDQTEFQLHVSFIEILKEEVRDLLDPPCLNKPDTANGHTGKVTVPGKPPIQIRETSNGV 185
            K   EF L VS++EI  EE+ DLL P                    K  I IRE     
Sbjct: 129 -KSDFEFTLKVSYLEIYNEEILDLLCPS-----------------REKAQINIREDPKEG 170

Query: 186 ITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVS 245
           I + G TE +V    +  +CLEQG+ SR   ST MN+QSSRSHAIFTI+LEQ +K     
Sbjct: 171 IKIVGLTEKTVLVALDTVSCLEQGNNSRTVASTAMNSQSSRSHAIFTISLEQRKK----- 225

Query: 246 LGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISAL 305
              S  N S       +KLHLVDLAGSER K+T ++G R KEG++INRGLL LGNVISAL
Sbjct: 226 ---SDKNSSFR-----SKLHLVDLAGSERQKKTKAEGDRLKEGININRGLLCLGNVISAL 277

Query: 306 GDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRAR 365
           GDDKK   G  VPYRDSKLTRLLQDSLGGNS T+MIAC+SPAD N EETLNTL+YA+RAR
Sbjct: 278 GDDKK---GGFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNLEETLNTLRYADRAR 334

Query: 366 NIQNKPIVNRDPMSTEMLKMRQQL------------------------EFLQA------- 394
            I+NKPIVN DP + E+  ++QQ+                        E LQ+       
Sbjct: 335 KIKNKPIVNIDPQTAELNHLKQQVQQLQVLLLQAHGGTLPGSITVEPSENLQSLMEKNQS 394

Query: 395 -----ELCARGGGSSSDEVQVLKERIAWLEAANEDLCRELHEYRSRCT----------DV 439
                E  +RG   ++ +   + ERI   E ANE +  +L E R               +
Sbjct: 395 LVEENEKLSRGLSEAAGQTAQMLERIILTEQANEKMNAKLEELRQHAACKLDLQKLVETL 454

Query: 440 EQRETDAQDGSPCPLK------SD----GLKRSLNSIEQTDYQMGENITGDSREIDEVAK 489
           E +E        C L+      SD     +  ++++  + + Q+ E     SR  D  A 
Sbjct: 455 EDQELKENVEIICNLQQLITQLSDETVACMAAAIDTAVEQEAQV-ETSPETSRSSD--AF 511

Query: 490 EWEHTLLQNSMDKELNELNRRLEEKESEMKLVGGSDT--AALKQHFGKKIAELEDEKRTV 547
             +H L Q  M KEL ELN+ L  KE+  + +  +D+    ++  +   I ELE E   +
Sbjct: 512 TTQHALRQAQMSKELVELNKALALKEALARKMTQNDSQLQPIQYQYQDNIKELELEVINL 571

Query: 548 QKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDLKKKQENQVQLLKQKQKS 607
           QKE++ L+ E++   +  D    KL +    +L+ LE QI DLKKK   Q +LLK K+ +
Sbjct: 572 QKEKEELVLELQ--TAKKDANQAKLSERRRKRLQELEGQIADLKKKLNEQSKLLKLKEST 629

Query: 608 DEAAKRLQDEIQFIKAQKVQLQHRIKQEAEQFRQWKASREKELLQLRKEGRRNEYERHKL 667
           +    +L  EI+ +K Q+VQL  ++K++AE+FRQWK  ++KE++QL++  R+ +YE  KL
Sbjct: 630 ERTVSKLNQEIRMMKNQRVQLMRQMKEDAEKFRQWKQKKDKEVIQLKERDRKRQYELLKL 689

Query: 668 QALNQRQKLVLQRKTEEAAMATKRLKELLESRKSSARENSAVTNGNLTNGQSNEKSFQRW 727
           +   Q+Q  VL+RKTEEAA A KRLK+ L+ ++  A +     +  +    +  K+   W
Sbjct: 690 ERNFQKQSNVLRRKTEEAAAANKRLKDALQKQREVADKRKETQSRGMEGTAARVKN---W 746

Query: 728 LDHELEVMVNVHEVRFDYEKQSQVRAALAEELAVLKQVDEFASKGLSPP----RGKNGFA 783
           L +E+EVMV+  E +       + R  LA+++A LK+  E    G +PP    R      
Sbjct: 747 LGNEIEVMVSTEEAKRHLNDLLEDRKILAQDVAQLKEKKE---SGENPPPKLRRRTFSLT 803

Query: 784 RVS---SMSPNARMARISSLENMLSISSNSLVAMASQLSEAEERDRLFTNRGRWNQLRSM 840
            V    S S ++   +I SLE  +   S  +  +  +L +AE  DR    + RW  + ++
Sbjct: 804 EVRGQVSESEDSITKQIESLETEMEFRSAQIADLQQKLLDAESEDR---PKQRWENIATI 860

Query: 841 ADAKNLLQYMFNSLADARCQLWEKDIEIKEMKEQLKELVGLLRQSEVRRKEVEEELK 897
            +AK  L+Y+   L  ++ Q+ + +  +K+ K    ++  +L +      E+E EL+
Sbjct: 861 LEAKCALKYLIGELVSSKIQVSKLESSLKQSKTSCADMQKMLFEERNHFAEIETELQ 917

Motor protein that translocates PRC1 to the plus ends of interdigitating spindle microtubules during the metaphase to anaphase transition, an essential step for the formation of an organized central spindle midzone and midbody and for successful cytokinesis. May play a role in mitotic chromosomal positioning and bipolar spindle stabilization.
Homo sapiens (taxid: 9606)

>sp\|P33174\|KIF4_MOUSE Chromosome-associated kinesin KIF4 OS=Mus musculus GN=Kif4 PE=2 SV=3	Back alignment and function description

>sp\|Q2VIQ3\|KIF4B_HUMAN Chromosome-associated kinesin KIF4B OS=Homo sapiens GN=KIF4B PE=2 SV=2	Back alignment and function description

>sp\|Q91784\|KIF4_XENLA Chromosome-associated kinesin KIF4 OS=Xenopus laevis GN=kif4 PE=2 SV=1	Back alignment and function description

>sp\|Q90640\|KIF4_CHICK Chromosome-associated kinesin KIF4 OS=Gallus gallus GN=KIF4 PE=2 SV=1	Back alignment and function description

>sp\|O75037\|KI21B_HUMAN Kinesin-like protein KIF21B OS=Homo sapiens GN=KIF21B PE=1 SV=2	Back alignment and function description

>sp\|Q9QXL1\|KI21B_MOUSE Kinesin-like protein KIF21B OS=Mus musculus GN=Kif21b PE=1 SV=2	Back alignment and function description

>sp\|Q9QXL2\|KI21A_MOUSE Kinesin-like protein KIF21A OS=Mus musculus GN=Kif21a PE=1 SV=2	Back alignment and function description

>sp\|Q7Z4S6\|KI21A_HUMAN Kinesin-like protein KIF21A OS=Homo sapiens GN=KIF21A PE=1 SV=2	Back alignment and function description

>sp\|Q86VH2\|KIF27_HUMAN Kinesin-like protein KIF27 OS=Homo sapiens GN=KIF27 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1034
255538224		1067	Kinesin heavy chain, putative [Ricinus c	0.995	0.964	0.899	0.0
224067254		1055	predicted protein [Populus trichocarpa]	0.990	0.970	0.874	0.0
359492582		1071	PREDICTED: chromosome-associated kinesin	0.991	0.957	0.862	0.0
302142281		1077	unnamed protein product [Vitis vinifera]	0.991	0.951	0.859	0.0
147790676		1094	hypothetical protein VITISV_001140 [Viti	0.991	0.936	0.844	0.0
449447023		1050	PREDICTED: chromosome-associated kinesin	0.991	0.976	0.835	0.0
356510469		1027	PREDICTED: chromosome-associated kinesin	0.985	0.992	0.827	0.0
359480793		1031	PREDICTED: chromosome-associated kinesin	0.988	0.991	0.818	0.0
356553972		1030	PREDICTED: chromosome-associated kinesin	0.990	0.994	0.831	0.0
296082375		1032	unnamed protein product [Vitis vinifera]	0.988	0.990	0.818	0.0

>gi\|255538224\|ref\|XP_002510177.1\| Kinesin heavy chain, putative [Ricinus communis] gi\|223550878\|gb\|EEF52364.1\| Kinesin heavy chain, putative [Ricinus communis]	Back alignment and taxonomy information

 Score = 1919 bits (4970), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 926/1030 (89%), Positives = 972/1030 (94%), Gaps = 1/1030 (0%)

Query: 3    TGGGEDCCVKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQIGTHSFTFDHVYGSTGSPS 62
            +   EDCCVKVAVHVRPLIGDERAQGC+DCV VV GKPQVQIGTHSFTFDHVYGS+ SP+
Sbjct: 21   SAAAEDCCVKVAVHVRPLIGDERAQGCQDCVTVVSGKPQVQIGTHSFTFDHVYGSSSSPA 80

Query: 63   SAMFDECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGYQTGIIPLVMNVLFSK 122
            SAMF+EC+APLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDG QTGIIP VMNVL+SK
Sbjct: 81   SAMFEECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGCQTGIIPQVMNVLYSK 140

Query: 123  IETLKDQTEFQLHVSFIEILKEEVRDLLDPPCLNKPDTANGHTGKVTVPGKPPIQIRETS 182
            IETLK QTEFQLHVSFIEILKEEVRDLLDP  LNKPDTANGHTGKV VPGKPPIQIRETS
Sbjct: 141  IETLKHQTEFQLHVSFIEILKEEVRDLLDPTSLNKPDTANGHTGKVNVPGKPPIQIRETS 200

Query: 183  NGVITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLS 242
            NGVITLAGSTEVSVS+LKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKL+
Sbjct: 201  NGVITLAGSTEVSVSTLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLN 260

Query: 243  PVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVI 302
            PV  GDSSPNE MNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHIN+GLLALGNVI
Sbjct: 261  PVFPGDSSPNEGMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVI 320

Query: 303  SALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYAN 362
            SALGD+KKRKEGVHVPYRDSKLTRLLQDSLGGNS+TVMIACISPADINAEETLNTLKYAN
Sbjct: 321  SALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEETLNTLKYAN 380

Query: 363  RARNIQNKPIVNRDPMSTEMLKMRQQLEFLQAELCARGGGSSSDEVQVLKERIAWLEAAN 422
            RARNIQNKP+VNRDPMS+EML+MRQQLE+LQAELCARGGGSSSDEVQVLKERIAWLEAAN
Sbjct: 381  RARNIQNKPVVNRDPMSSEMLRMRQQLEYLQAELCARGGGSSSDEVQVLKERIAWLEAAN 440

Query: 423  EDLCRELHEYRSRCTDVEQRETDAQDGSPCPLKSDGLKRSLNSIEQTDYQMGENITGDSR 482
            EDLCRELHEYRSRCT VEQRETDAQDGS C +K+DGLKRSL SIE TDYQMGE ++GDSR
Sbjct: 441  EDLCRELHEYRSRCTAVEQRETDAQDGSTCYVKTDGLKRSLQSIESTDYQMGETMSGDSR 500

Query: 483  EIDE-VAKEWEHTLLQNSMDKELNELNRRLEEKESEMKLVGGSDTAALKQHFGKKIAELE 541
            EIDE VAKEWEHTLLQN+MDKEL+ELNRRLEEKESEMKL GG D AALKQHFGKKI ELE
Sbjct: 501  EIDEEVAKEWEHTLLQNTMDKELHELNRRLEEKESEMKLFGGVDPAALKQHFGKKIMELE 560

Query: 542  DEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDLKKKQENQVQLL 601
            DEKRTVQ+ERD LL EIEN++++SDGQTQK+QD+HA KLK+LEAQILDLKKKQENQVQLL
Sbjct: 561  DEKRTVQQERDRLLAEIENISASSDGQTQKMQDIHAQKLKALEAQILDLKKKQENQVQLL 620

Query: 602  KQKQKSDEAAKRLQDEIQFIKAQKVQLQHRIKQEAEQFRQWKASREKELLQLRKEGRRNE 661
            KQKQKSDEAAKRLQDEIQ IKAQKVQLQHRIKQEAEQFRQWKASREKELLQLRKEGRRNE
Sbjct: 621  KQKQKSDEAAKRLQDEIQSIKAQKVQLQHRIKQEAEQFRQWKASREKELLQLRKEGRRNE 680

Query: 662  YERHKLQALNQRQKLVLQRKTEEAAMATKRLKELLESRKSSARENSAVTNGNLTNGQSNE 721
            YERHKLQALNQRQK+VLQRKTEEAAMATKRLKELLE+RKSSARENSA+ NGN TNGQSNE
Sbjct: 681  YERHKLQALNQRQKMVLQRKTEEAAMATKRLKELLEARKSSARENSAIANGNGTNGQSNE 740

Query: 722  KSFQRWLDHELEVMVNVHEVRFDYEKQSQVRAALAEELAVLKQVDEFASKGLSPPRGKNG 781
            KS QRW+DHELEVMVNVHEVRF+YEKQSQVRAALAEELAVLKQV EF SKGLSPPRGKNG
Sbjct: 741  KSLQRWVDHELEVMVNVHEVRFEYEKQSQVRAALAEELAVLKQVGEFTSKGLSPPRGKNG 800

Query: 782  FARVSSMSPNARMARISSLENMLSISSNSLVAMASQLSEAEERDRLFTNRGRWNQLRSMA 841
            FAR SSMSPNARMARISSLENMLSI+SNSLVAMASQLSEAEER+R FTNRGRWNQLRSM 
Sbjct: 801  FARASSMSPNARMARISSLENMLSITSNSLVAMASQLSEAEERERGFTNRGRWNQLRSMG 860

Query: 842  DAKNLLQYMFNSLADARCQLWEKDIEIKEMKEQLKELVGLLRQSEVRRKEVEEELKLREQ 901
            DAKNLLQYMFNSL DARCQ+WEK++EIKEMKEQ KELV LLRQSE RRKEVE+ELKLREQ
Sbjct: 861  DAKNLLQYMFNSLGDARCQIWEKEMEIKEMKEQFKELVSLLRQSEARRKEVEKELKLREQ 920

Query: 902  AVAITLARSASGNLHNSLEHFADDTSGPPSPMSVPAQKQLKYTPGIANGSIRESAAFINQ 961
            AVAI LA SASGN   SL+HFADD SGP SPMSVPAQKQLKYTPGIANGS+RESAAFI+Q
Sbjct: 921  AVAIALATSASGNSPISLKHFADDMSGPLSPMSVPAQKQLKYTPGIANGSVRESAAFIDQ 980

Query: 962  NRKRVPLGQLSMKKLAALGQGGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRHSDETIV 1021
             RK VPLG LSM+KL   GQGGKLWRWKRSHHQWLLQFKWKWQKPWRLSE IRHSDETI+
Sbjct: 981  TRKMVPLGHLSMRKLVVAGQGGKLWRWKRSHHQWLLQFKWKWQKPWRLSEMIRHSDETIM 1040

Query: 1022 RAKPRPRALP 1031
            RAK RP ALP
Sbjct: 1041 RAKHRPHALP 1050

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224067254\|ref\|XP_002302432.1\| predicted protein [Populus trichocarpa] gi\|222844158\|gb\|EEE81705.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|359492582\|ref\|XP_002282968.2\| PREDICTED: chromosome-associated kinesin KIF4A-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|302142281\|emb\|CBI19484.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|147790676\|emb\|CAN61020.1\| hypothetical protein VITISV_001140 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|449447023\|ref\|XP_004141269.1\| PREDICTED: chromosome-associated kinesin KIF4A-like [Cucumis sativus] gi\|449523834\|ref\|XP_004168928.1\| PREDICTED: chromosome-associated kinesin KIF4A-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356510469\|ref\|XP_003523960.1\| PREDICTED: chromosome-associated kinesin KIF4-like [Glycine max]	Back alignment and taxonomy information

>gi\|359480793\|ref\|XP_002278379.2\| PREDICTED: chromosome-associated kinesin KIF4-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356553972\|ref\|XP_003545324.1\| PREDICTED: chromosome-associated kinesin KIF4A-like [Glycine max]	Back alignment and taxonomy information

>gi\|296082375\|emb\|CBI21380.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1034
TAIR\|locus:2160912		1035	FRA1 "FRAGILE FIBER 1" [Arabid	0.984	0.983	0.773	0.0
TAIR\|locus:2074855		1051	KICP-02 [Arabidopsis thaliana	0.960	0.944	0.630	0.0
TAIR\|locus:2173537		1294	AT5G60930 [Arabidopsis thalian	0.705	0.563	0.435	4.6e-144
UNIPROTKB\|O95239		1232	KIF4A "Chromosome-associated k	0.661	0.555	0.329	1.1e-114
MGI\|MGI:108389		1231	Kif4 "kinesin family member 4"	0.457	0.384	0.375	2.2e-111
UNIPROTKB\|K7GQ60		1210	KIF4A "Uncharacterized protein	0.459	0.392	0.373	2.1e-110
UNIPROTKB\|F1RTL0		1234	KIF4A "Uncharacterized protein	0.459	0.384	0.373	2.7e-110
UNIPROTKB\|Q2VIQ3		1234	KIF4B "Chromosome-associated k	0.448	0.376	0.378	4.3e-110
UNIPROTKB\|F1PDX5		1234	KIF4A "Uncharacterized protein	0.457	0.383	0.377	5.2e-110
UNIPROTKB\|E9PSJ3		1231	Kif4 "Protein Kif4" [Rattus no	0.498	0.418	0.352	1.1e-109

TAIR\|locus:2160912 FRA1 "FRAGILE FIBER 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 4022 (1420.9 bits), Expect = 0., P = 0.
 Identities = 799/1033 (77%), Positives = 886/1033 (85%)

Query:     7 EDCCVKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQIGTHSFTFDHVYGSTGSPSSAMF 66
             +DC VKVAVH+RPLIGDER QGC+DCV VV GKPQVQIG+HSFTFDHVYGS+GSPS+ M+
Sbjct:     8 DDCSVKVAVHIRPLIGDERIQGCQDCVTVVTGKPQVQIGSHSFTFDHVYGSSGSPSTEMY 67

Query:    67 DECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGYQTGIIPLVMNVLFSKIETL 126
             +EC APLVDGLFQGYNATVLAYGQTGSGKTYTMGTG  D  QTGIIP VMN LF+KIETL
Sbjct:    68 EECAAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGCGDSSQTGIIPQVMNALFTKIETL 127

Query:   127 KDQTEFQLHVSFIEILKEEVRDLLDPPCLNKPDTAN-GHTGKVT-VPGKPPIQIRETSNG 184
             K Q EFQ+HVSFIEI KEEV+DLLDP  +NK DT N GH GKV  VPGKPPIQIRETSNG
Sbjct:   128 KQQIEFQIHVSFIEIHKEEVQDLLDPCTVNKSDTNNTGHVGKVAHVPGKPPIQIRETSNG 187

Query:   185 VITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPV 244
             VITLAGSTEVSVS+LKEMAACL+QGS+SRATGSTNMNNQSSRSHAIFTIT+EQMRK++  
Sbjct:   188 VITLAGSTEVSVSTLKEMAACLDQGSVSRATGSTNMNNQSSRSHAIFTITVEQMRKINTD 247

Query:   245 SLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISA 304
             S  + + N S+ EEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHIN+GLLALGNVISA
Sbjct:   248 SPENGAYNGSLKEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISA 307

Query:   305 LGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRA 364
             LGD+KKRK+G HVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRA
Sbjct:   308 LGDEKKRKDGAHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRA 367

Query:   365 RNIQNKPIVNRDPMSTEMLKMRQQLEFLQAELCARGGGSSSDEVQVLKERIAWLEAANED 424
             RNI+NKP+VNRDP+S+EMLKMRQQ+E+LQAEL  R GGSS  EVQ LKERI WLE ANE+
Sbjct:   368 RNIRNKPVVNRDPVSSEMLKMRQQVEYLQAELSLRTGGSSCAEVQALKERIVWLETANEE 427

Query:   425 LCRELHEYRSRCTDVEQRETDAQDGSPCPL----KSDGLKRSLNSIEQTDYQMGENITGD 480
             LCRELHEYRSRC  VE  E D +D     +    + DGLKRSL+SIE ++Y M E  TGD
Sbjct:   428 LCRELHEYRSRCPGVEHSEKDFKDIRADDIVGSVRPDGLKRSLHSIESSNYPMVEATTGD 487

Query:   481 SREIDEVAKEWEHTLLQNSMDXXXXXXXXXXXXXXSEMKLVGGSDTAALKQHFGKKIAEL 540
             SREIDE AKEWEH LLQNSMD              SEMKL  G D AALKQHFGKKIAE+
Sbjct:   488 SREIDEEAKEWEHKLLQNSMDKELYELNRRLEEKESEMKLFDGYDPAALKQHFGKKIAEV 547

Query:   541 EDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDLKKKQENQVQL 600
             EDEKR+VQ+ER+ LL EIENLAS  DGQ QKLQDVHA  LK+LEAQILDLKKKQE+QVQL
Sbjct:   548 EDEKRSVQEERNRLLAEIENLAS--DGQAQKLQDVHAQNLKALEAQILDLKKKQESQVQL 605

Query:   601 LKQKQKSDEAAKRLQDEIQFIKAQKVQLQHRIKQEAEQFRQWKASREKELLQLRKEGRRN 660
             LKQKQKSD+AA+RLQDEIQ IKAQKVQLQHR+KQEAEQFRQWKASREKELLQLRKEGR++
Sbjct:   606 LKQKQKSDDAARRLQDEIQSIKAQKVQLQHRMKQEAEQFRQWKASREKELLQLRKEGRKS 665

Query:   661 EYERHKLQALNQRQKLVLQRKTEEAAMATKRLKELLESRKSSARENSAVTNGNLTNGQSN 720
             EYERHKLQALNQRQK+VLQRKTEEAAMATKRLKELLE+RKSS RE+SA TNG  TNGQ+N
Sbjct:   666 EYERHKLQALNQRQKMVLQRKTEEAAMATKRLKELLEARKSSPREHSAGTNGFGTNGQTN 725

Query:   721 EKSFQRWLDHELEVMVNVHEVRFDYEKQSQVRXXXXXXXXVLKQVDEFASKGLSPPRGKN 780
             EKS QRWLDHELEVMVNVHEVR +YEKQS VR        VL+QVDEFA KGLSPPRGKN
Sbjct:   726 EKSLQRWLDHELEVMVNVHEVRHEYEKQSHVRAALAEELAVLRQVDEFAVKGLSPPRGKN 785

Query:   781 GFARVSSMSPNARMARISSLENMLSISSNSLVAMASQLSEAEERDRLFTNRGRWNQLRSM 840
             GFAR SS+SPNARMARISSLENML ISSNSLVAMASQLSEAEER+R FTNRGRWNQLRSM
Sbjct:   786 GFARASSLSPNARMARISSLENMLVISSNSLVAMASQLSEAEERERAFTNRGRWNQLRSM 845

Query:   841 ADAKNLLQYMFNSLADARCQLWEKDIEIKEMKEQLKELVGLLRQSXXXXXXXXXXXXXXX 900
              +AKNLLQYMFNSLA+ RCQLWEKD+EIKEMK+Q KE+VGLLRQS               
Sbjct:   846 GEAKNLLQYMFNSLAETRCQLWEKDVEIKEMKDQFKEIVGLLRQSELRRKEAEKELKLRE 905

Query:   901 QAVAITLARSASGNLHNSLEHFADDTSGPPSPMSVPAQKQLKYTPGIANGSIRESAAFIN 960
             QA+A +L     G   +S++H A+D S  PSPM+VPAQKQLK+TPGIANG +R  AAF++
Sbjct:   906 QAIATSL-----GTPPSSVKHVAEDLS-TPSPMTVPAQKQLKFTPGIANGKVRGPAAFLD 959

Query:   961 QNRKRVPLGQLSMKKLAALG-QGGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRHSDET 1019
              N+K VP+GQ+SM+KL+A+G QGG+LWRWKRSHHQW++QFKWKWQKPWRLSEWIR SDET
Sbjct:   960 TNKKMVPMGQVSMRKLSAVGKQGGRLWRWKRSHHQWIVQFKWKWQKPWRLSEWIRTSDET 1019

Query:  1020 IVRAKPRPRALPH 1032
             ++++KPR +ALP+
Sbjct:  1020 LLKSKPRLKALPN 1032

GO:0003777 "microtubule motor activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0010215 "cellulose microfibril organization" evidence=IMP

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

TAIR\|locus:2074855 KICP-02 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2173537 AT5G60930 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|O95239 KIF4A "Chromosome-associated kinesin KIF4A" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

MGI\|MGI:108389 Kif4 "kinesin family member 4" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|K7GQ60 KIF4A "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

UNIPROTKB\|F1RTL0 KIF4A "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

UNIPROTKB\|Q2VIQ3 KIF4B "Chromosome-associated kinesin KIF4B" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|F1PDX5 KIF4A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|E9PSJ3 Kif4 "Protein Kif4" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh4_pg.C_LG_II001130	hypothetical protein (1055 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1034
cd01372		341	cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik	0.0
smart00129		335	smart00129, KISc, Kinesin motor, catalytic domain	1e-142
pfam00225		326	pfam00225, Kinesin, Kinesin motor domain	1e-136
cd00106		328	cd00106, KISc, Kinesin motor domain	1e-126
cd01370		338	cd01370, KISc_KIP3_like, Kinesin motor domain, KIP	1e-114
cd01365		356	cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, K	1e-113
cd01369		325	cd01369, KISc_KHC_KIF5, Kinesin motor domain, kine	1e-104
cd01371		333	cd01371, KISc_KIF3, Kinesin motor domain, kinesins	1e-103
cd01366		329	cd01366, KISc_C_terminal, Kinesin motor domain, KI	1e-102
cd01364		352	cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC	1e-102
cd01374		321	cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E	1e-100
cd01367		322	cd01367, KISc_KIF2_like, Kinesin motor domain, KIF	7e-88
COG5059		568	COG5059, KIP1, Kinesin-like protein [Cytoskeleton]	1e-85
cd01373		337	cd01373, KISc_KLP2_like, Kinesin motor domain, KLP	8e-81
cd01375		334	cd01375, KISc_KIF9_like, Kinesin motor domain, KIF	1e-74
cd01376		319	cd01376, KISc_KID_like, Kinesin motor domain, KIF2	4e-69
cd01368		345	cd01368, KISc_KIF23_like, Kinesin motor domain, KI	1e-66
PLN03188		1320	PLN03188, PLN03188, kinesin-12 family protein; Pro	3e-60
cd01363		186	cd01363, Motor_domain, Myosin and Kinesin motor do	1e-37
cd01363		186	cd01363, Motor_domain, Myosin and Kinesin motor do	5e-09
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	8e-09
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	4e-08
COG0419		908	COG0419, SbcC, ATPase involved in DNA repair [DNA	5e-08
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	2e-07
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	2e-07
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	2e-07
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	3e-07
COG0419		908	COG0419, SbcC, ATPase involved in DNA repair [DNA	3e-07
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	3e-07
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	4e-07
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	5e-07
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	4e-06
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	6e-06
pfam05557		722	pfam05557, MAD, Mitotic checkpoint protein	2e-05
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	3e-05
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	4e-05
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	5e-05
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	2e-04
PTZ00121		2084	PTZ00121, PTZ00121, MAEBL; Provisional	2e-04
COG1579		239	COG1579, COG1579, Zn-ribbon protein, possibly nucl	2e-04
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	3e-04
PRK03918		880	PRK03918, PRK03918, chromosome segregation protein	3e-04
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	4e-04
PRK03918		880	PRK03918, PRK03918, chromosome segregation protein	6e-04
pfam12128		1198	pfam12128, DUF3584, Protein of unknown function (D	7e-04
PRK00286		438	PRK00286, xseA, exodeoxyribonuclease VII large sub	8e-04
TIGR03185		650	TIGR03185, DNA_S_dndD, DNA sulfur modification pro	0.001
pfam13868		349	pfam13868, Trichoplein, Tumour suppressor, Mitosta	0.001
pfam05010		207	pfam05010, TACC, Transforming acidic coiled-coil-c	0.001
pfam00038		312	pfam00038, Filament, Intermediate filament protein	0.001
PTZ00121		2084	PTZ00121, PTZ00121, MAEBL; Provisional	0.002
pfam10211		189	pfam10211, Ax_dynein_light, Axonemal dynein light	0.002
COG4372		499	COG4372, COG4372, Uncharacterized protein conserve	0.002
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	0.003
PRK11448		1123	PRK11448, hsdR, type I restriction enzyme EcoKI su	0.003
COG3064		387	COG3064, TolA, Membrane protein involved in colici	0.003
pfam01576		859	pfam01576, Myosin_tail_1, Myosin tail	0.003
COG5281		833	COG5281, COG5281, Phage-related minor tail protein	0.003
TIGR00606		1311	TIGR00606, rad50, rad50	0.004
pfam02463		1162	pfam02463, SMC_N, RecF/RecN/SMC N terminal domain	0.004

>gnl\|CDD\|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily	Back alignment and domain information

 Score =  583 bits (1505), Expect = 0.0
 Identities = 218/364 (59%), Positives = 260/364 (71%), Gaps = 27/364 (7%)

Query: 9   CCVKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQIGT-HSFTFDHVYGSTGSPSSAMFD 67
             V+VAV VRPL+  E  +GC+ CV+VVPG+PQV +GT  SFTFD+V+  + S    +++
Sbjct: 1   SSVRVAVRVRPLLPKELLEGCQVCVSVVPGEPQVTVGTDKSFTFDYVFDPSTSQE-EVYN 59

Query: 68  ECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGY---QTGIIPLVMNVLFSKIE 124
            C+APLVDGLF+GYNATVLAYGQTGSGKTYTMGT F       + GIIP  +  +F KI+
Sbjct: 60  TCVAPLVDGLFEGYNATVLAYGQTGSGKTYTMGTAFTASEDEEEVGIIPRAIQHIFKKID 119

Query: 125 TLKDQTEFQLHVSFIEILKEEVRDLLDPPCLNKPDTANGHTGKVTVPGKPPIQIRETSNG 184
             KD+ +FQL VSF+E+  EEVRDLL P                +   K PIQIRE S G
Sbjct: 120 EKKDEPDFQLKVSFLELYNEEVRDLLSP----------------STSEKSPIQIREDSKG 163

Query: 185 VITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPV 244
            I + G TEV+V+S +E+ +CLEQGSLSR T ST MN+QSSRSHAIFTITLEQ RK  P 
Sbjct: 164 NIIIVGLTEVTVNSAQEVMSCLEQGSLSRTTASTAMNSQSSRSHAIFTITLEQTRKNGP- 222

Query: 245 SLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISA 304
               +  +       L +K H VDLAGSER K+TG+ G R KEG+ IN GLLALGNVISA
Sbjct: 223 ---IAPMSGDDKNSTLTSKFHFVDLAGSERLKKTGATGDRLKEGISINSGLLALGNVISA 279

Query: 305 LGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRA 364
           LGD+ K+  G HVPYRDSKLTRLLQDSLGGNS T+MIAC+SPAD N EETLNTLKYANRA
Sbjct: 280 LGDESKK--GSHVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNFEETLNTLKYANRA 337

Query: 365 RNIQ 368
           RNI+
Sbjct: 338 RNIK 341

Members of this group seem to perform a variety of functions, and have been implicated in neuronal organelle transport and chromosome segregation during mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 341

>gnl\|CDD\|214526 smart00129, KISc, Kinesin motor, catalytic domain	Back alignment and domain information

>gnl\|CDD\|215803 pfam00225, Kinesin, Kinesin motor domain	Back alignment and domain information

>gnl\|CDD\|238054 cd00106, KISc, Kinesin motor domain	Back alignment and domain information

>gnl\|CDD\|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup	Back alignment and domain information

>gnl\|CDD\|238661 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, KIF1_like proteins	Back alignment and domain information

>gnl\|CDD\|238665 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup	Back alignment and domain information

>gnl\|CDD\|238667 cd01371, KISc_KIF3, Kinesin motor domain, kinesins II or KIF3_like proteins	Back alignment and domain information

>gnl\|CDD\|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins	Back alignment and domain information

>gnl\|CDD\|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division	Back alignment and domain information

>gnl\|CDD\|238670 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis	Back alignment and domain information

>gnl\|CDD\|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group	Back alignment and domain information

>gnl\|CDD\|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>gnl\|CDD\|238669 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP2-like subgroup	Back alignment and domain information

>gnl\|CDD\|238671 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling	Back alignment and domain information

>gnl\|CDD\|238672 cd01376, KISc_KID_like, Kinesin motor domain, KIF22/Kid-like subgroup	Back alignment and domain information

>gnl\|CDD\|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup	Back alignment and domain information

>gnl\|CDD\|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional	Back alignment and domain information

>gnl\|CDD\|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain	Back alignment and domain information

>gnl\|CDD\|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|218636 pfam05557, MAD, Mitotic checkpoint protein	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|173412 PTZ00121, PTZ00121, MAEBL; Provisional	Back alignment and domain information

>gnl\|CDD\|224495 COG1579, COG1579, Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional	Back alignment and domain information

>gnl\|CDD\|221432 pfam12128, DUF3584, Protein of unknown function (DUF3584)	Back alignment and domain information

>gnl\|CDD\|234714 PRK00286, xseA, exodeoxyribonuclease VII large subunit; Reviewed	Back alignment and domain information

>gnl\|CDD\|234141 TIGR03185, DNA_S_dndD, DNA sulfur modification protein DndD	Back alignment and domain information

>gnl\|CDD\|206039 pfam13868, Trichoplein, Tumour suppressor, Mitostatin	Back alignment and domain information

>gnl\|CDD\|218380 pfam05010, TACC, Transforming acidic coiled-coil-containing protein (TACC)	Back alignment and domain information

>gnl\|CDD\|200948 pfam00038, Filament, Intermediate filament protein	Back alignment and domain information

>gnl\|CDD\|173412 PTZ00121, PTZ00121, MAEBL; Provisional	Back alignment and domain information

>gnl\|CDD\|204414 pfam10211, Ax_dynein_light, Axonemal dynein light chain	Back alignment and domain information

>gnl\|CDD\|226809 COG4372, COG4372, Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown]	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|236912 PRK11448, hsdR, type I restriction enzyme EcoKI subunit R; Provisional	Back alignment and domain information

>gnl\|CDD\|225606 COG3064, TolA, Membrane protein involved in colicin uptake [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>gnl\|CDD\|144972 pfam01576, Myosin_tail_1, Myosin tail	Back alignment and domain information

>gnl\|CDD\|227606 COG5281, COG5281, Phage-related minor tail protein [Function unknown]	Back alignment and domain information

>gnl\|CDD\|129694 TIGR00606, rad50, rad50	Back alignment and domain information

>gnl\|CDD\|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1034
KOG0244		913	consensus Kinesin-like protein [Cytoskeleton]	100.0
KOG0243		1041	consensus Kinesin-like protein [Cytoskeleton]	100.0
KOG0245		1221	consensus Kinesin-like protein [Cytoskeleton]	100.0
KOG4280		574	consensus Kinesin-like protein [Cytoskeleton]	100.0
KOG0240		607	consensus Kinesin (SMY1 subfamily) [Cytoskeleton]	100.0
PLN03188		1320	kinesin-12 family protein; Provisional	100.0
KOG0241		1714	consensus Kinesin-like protein [Cytoskeleton]	100.0
KOG0242		675	consensus Kinesin-like protein [Cytoskeleton]	100.0
cd01373		337	KISc_KLP2_like Kinesin motor domain, KLP2-like sub	100.0
cd01370		338	KISc_KIP3_like Kinesin motor domain, KIP3-like sub	100.0
cd01368		345	KISc_KIF23_like Kinesin motor domain, KIF23-like s	100.0
cd01365		356	KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like p	100.0
cd01364		352	KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spind	100.0
cd01372		341	KISc_KIF4 Kinesin motor domain, KIF4-like subfamil	100.0
cd01371		333	KISc_KIF3 Kinesin motor domain, kinesins II or KIF	100.0
cd01369		325	KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy	100.0
cd01367		322	KISc_KIF2_like Kinesin motor domain, KIF2-like gro	100.0
cd01376		319	KISc_KID_like Kinesin motor domain, KIF22/Kid-like	100.0
cd01375		334	KISc_KIF9_like Kinesin motor domain, KIF9-like sub	100.0
cd01374		321	KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like	100.0
cd01366		329	KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/	100.0
smart00129		335	KISc Kinesin motor, catalytic domain. ATPase. Micr	100.0
KOG0239		670	consensus Kinesin (KAR3 subfamily) [Cytoskeleton]	100.0
KOG0246		676	consensus Kinesin-like protein [Cytoskeleton]	100.0
KOG0247		809	consensus Kinesin-like protein [Cytoskeleton]	100.0
PF00225		335	Kinesin: Kinesin motor domain; InterPro: IPR001752	100.0
cd00106		328	KISc Kinesin motor domain. This catalytic (head) d	100.0
COG5059		568	KIP1 Kinesin-like protein [Cytoskeleton]	100.0
cd01363		186	Motor_domain Myosin and Kinesin motor domain. Thes	100.0
KOG0161		1930	consensus Myosin class II heavy chain [Cytoskeleto	99.93
KOG0161		1930	consensus Myosin class II heavy chain [Cytoskeleto	99.8
PF01576		859	Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu	99.31
PF01576		859	Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu	99.15
PRK02224		880	chromosome segregation protein; Provisional	99.01
PRK02224		880	chromosome segregation protein; Provisional	98.99
KOG4674		1822	consensus Uncharacterized conserved coiled-coil pr	98.93
PRK03918		880	chromosome segregation protein; Provisional	98.9
PF07888		546	CALCOCO1: Calcium binding and coiled-coil domain (	98.84
TIGR00606		1311	rad50 rad50. This family is based on the phylogeno	98.84
PRK03918		880	chromosome segregation protein; Provisional	98.81
KOG4674		1822	consensus Uncharacterized conserved coiled-coil pr	98.71
KOG4643		1195	consensus Uncharacterized coiled-coil protein [Fun	98.7
TIGR02168		1179	SMC_prok_B chromosome segregation protein SMC, com	98.51
PF07888		546	CALCOCO1: Calcium binding and coiled-coil domain (	98.46
TIGR00606		1311	rad50 rad50. This family is based on the phylogeno	98.46
TIGR02169		1164	SMC_prok_A chromosome segregation protein SMC, pri	98.45
KOG0612		1317	consensus Rho-associated, coiled-coil containing p	98.44
KOG0994		1758	consensus Extracellular matrix glycoprotein Lamini	98.41
TIGR02168		1179	SMC_prok_B chromosome segregation protein SMC, com	98.39
COG1196		1163	Smc Chromosome segregation ATPases [Cell division	98.38
TIGR02169		1164	SMC_prok_A chromosome segregation protein SMC, pri	98.36
PF12128		1201	DUF3584: Protein of unknown function (DUF3584); In	98.36
KOG4643		1195	consensus Uncharacterized coiled-coil protein [Fun	98.34
PF00038		312	Filament: Intermediate filament protein; InterPro:	98.33
KOG0612		1317	consensus Rho-associated, coiled-coil containing p	98.32
KOG0971		1243	consensus Microtubule-associated protein dynactin	98.31
KOG0977		546	consensus Nuclear envelope protein lamin, intermed	98.31
PF10174		775	Cast: RIM-binding protein of the cytomatrix active	98.27
PF12128		1201	DUF3584: Protein of unknown function (DUF3584); In	98.24
KOG0963		629	consensus Transcription factor/CCAAT displacement	98.21
KOG4673		961	consensus Transcription factor TMF, TATA element m	98.2
COG1196		1163	Smc Chromosome segregation ATPases [Cell division	98.19
PF10174		775	Cast: RIM-binding protein of the cytomatrix active	98.17
PRK01156		895	chromosome segregation protein; Provisional	98.15
PF00038		312	Filament: Intermediate filament protein; InterPro:	98.1
KOG0971		1243	consensus Microtubule-associated protein dynactin	98.05
KOG1029		1118	consensus Endocytic adaptor protein intersectin [S	98.03
COG5059		568	KIP1 Kinesin-like protein [Cytoskeleton]	97.99
KOG0977		546	consensus Nuclear envelope protein lamin, intermed	97.94
KOG0964		1200	consensus Structural maintenance of chromosome pro	97.93
KOG0976		1265	consensus Rho/Rac1-interacting serine/threonine ki	97.91
KOG4673		961	consensus Transcription factor TMF, TATA element m	97.91
KOG0933		1174	consensus Structural maintenance of chromosome pro	97.85
PF09726		697	Macoilin: Transmembrane protein; InterPro: IPR0191	97.83
PRK04863		1486	mukB cell division protein MukB; Provisional	97.79
KOG0996		1293	consensus Structural maintenance of chromosome pro	97.77
KOG1029		1118	consensus Endocytic adaptor protein intersectin [S	97.63
PRK01156		895	chromosome segregation protein; Provisional	97.62
PRK11637		428	AmiB activator; Provisional	97.55
PF05667		594	DUF812: Protein of unknown function (DUF812); Inte	97.48
PF09726		697	Macoilin: Transmembrane protein; InterPro: IPR0191	97.46
PF05701		522	WEMBL: Weak chloroplast movement under blue light;	97.45
PF00261		237	Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop	97.43
PF05483		786	SCP-1: Synaptonemal complex protein 1 (SCP-1); Int	97.43
KOG0933		1174	consensus Structural maintenance of chromosome pro	97.38
PRK04778		569	septation ring formation regulator EzrA; Provision	97.37
PHA02562		562	46 endonuclease subunit; Provisional	97.35
KOG0250		1074	consensus DNA repair protein RAD18 (SMC family pro	97.33
PF09755		310	DUF2046: Uncharacterized conserved protein H4 (DUF	97.32
KOG0996		1293	consensus Structural maintenance of chromosome pro	97.22
PF05667		594	DUF812: Protein of unknown function (DUF812); Inte	97.14
KOG0964		1200	consensus Structural maintenance of chromosome pro	97.14
PF05557		722	MAD: Mitotic checkpoint protein; InterPro: IPR0086	97.09
PF09755		310	DUF2046: Uncharacterized conserved protein H4 (DUF	96.96
PF15066		527	CAGE1: Cancer-associated gene protein 1 family	96.9
KOG0946		970	consensus ER-Golgi vesicle-tethering protein p115	96.89
KOG0976		1265	consensus Rho/Rac1-interacting serine/threonine ki	96.89
KOG0999		772	consensus Microtubule-associated protein Bicaudal-	96.87
PHA02562		562	46 endonuclease subunit; Provisional	96.86
COG0556		663	UvrB Helicase subunit of the DNA excision repair c	96.82
PRK10929		1109	putative mechanosensitive channel protein; Provisi	96.78
PRK11281		1113	hypothetical protein; Provisional	96.69
PF00261		237	Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop	96.69
PF15070		617	GOLGA2L5: Putative golgin subfamily A member 2-lik	96.64
COG4942		420	Membrane-bound metallopeptidase [Cell division and	96.58
KOG0994		1758	consensus Extracellular matrix glycoprotein Lamini	96.49
COG1579		239	Zn-ribbon protein, possibly nucleic acid-binding [	96.48
PF05557		722	MAD: Mitotic checkpoint protein; InterPro: IPR0086	96.38
KOG0995		581	consensus Centromere-associated protein HEC1 [Cell	96.33
KOG0995		581	consensus Centromere-associated protein HEC1 [Cell	96.29
KOG2129		552	consensus Uncharacterized conserved protein H4 [Fu	96.29
KOG2129		552	consensus Uncharacterized conserved protein H4 [Fu	96.23
COG0419		908	SbcC ATPase involved in DNA repair [DNA replicatio	96.1
PRK04778		569	septation ring formation regulator EzrA; Provision	96.1
KOG0250		1074	consensus DNA repair protein RAD18 (SMC family pro	96.04
KOG0946		970	consensus ER-Golgi vesicle-tethering protein p115	95.95
KOG0018		1141	consensus Structural maintenance of chromosome pro	95.92
PF10481		307	CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0	95.86
PF05010		207	TACC: Transforming acidic coiled-coil-containing p	95.73
PF05622		713	HOOK: HOOK protein; InterPro: IPR008636 This famil	95.72
PRK04863		1486	mukB cell division protein MukB; Provisional	95.69
COG4942		420	Membrane-bound metallopeptidase [Cell division and	95.39
PF09730		717	BicD: Microtubule-associated protein Bicaudal-D; I	95.36
KOG0963		629	consensus Transcription factor/CCAAT displacement	95.32
COG4372		499	Uncharacterized protein conserved in bacteria with	95.1
COG4372		499	Uncharacterized protein conserved in bacteria with	95.05
KOG0999		772	consensus Microtubule-associated protein Bicaudal-	95.03
PF15066		527	CAGE1: Cancer-associated gene protein 1 family	94.99
PRK09039		343	hypothetical protein; Validated	94.91
PF15070		617	GOLGA2L5: Putative golgin subfamily A member 2-lik	94.75
COG3883		265	Uncharacterized protein conserved in bacteria [Fun	94.74
PF04849		306	HAP1_N: HAP1 N-terminal conserved region; InterPro	94.53
COG5185		622	HEC1 Protein involved in chromosome segregation, i	94.49
COG1579		239	Zn-ribbon protein, possibly nucleic acid-binding [	94.44
COG3883		265	Uncharacterized protein conserved in bacteria [Fun	94.43
PF14662		193	CCDC155: Coiled-coil region of CCDC155	94.39
PF05701		522	WEMBL: Weak chloroplast movement under blue light;	94.21
PF15619		194	Lebercilin: Ciliary protein causing Leber congenit	94.2
PF12718		143	Tropomyosin_1: Tropomyosin like; InterPro: IPR0005	94.18
PF12718		143	Tropomyosin_1: Tropomyosin like; InterPro: IPR0005	94.13
KOG0962		1294	consensus DNA repair protein RAD50, ABC-type ATPas	94.06
PF05622		713	HOOK: HOOK protein; InterPro: IPR008636 This famil	93.98
PRK09039		343	hypothetical protein; Validated	93.93
PF15397		258	DUF4618: Domain of unknown function (DUF4618)	93.93
PF09728		309	Taxilin: Myosin-like coiled-coil protein; InterPro	93.88
PF00308		219	Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013	93.8
KOG0980		980	consensus Actin-binding protein SLA2/Huntingtin-in	93.78
PF05483		786	SCP-1: Synaptonemal complex protein 1 (SCP-1); Int	93.76
COG2805		353	PilT Tfp pilus assembly protein, pilus retraction	93.69
KOG4593		716	consensus Mitotic checkpoint protein MAD1 [Cell cy	93.67
PF10481		307	CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0	93.66
PF09787		511	Golgin_A5: Golgin subfamily A member 5; InterPro:	93.54
PF08317		325	Spc7: Spc7 kinetochore protein; InterPro: IPR01325	93.52
COG1340		294	Uncharacterized archaeal coiled-coil protein [Func	93.49
PF06160		560	EzrA: Septation ring formation regulator, EzrA ; I	93.42
PF14662		193	CCDC155: Coiled-coil region of CCDC155	93.39
KOG1850		391	consensus Myosin-like coiled-coil protein [Cytoske	93.26
PRK06893		229	DNA replication initiation factor; Validated	93.11
TIGR03185		650	DNA_S_dndD DNA sulfur modification protein DndD. T	92.99
KOG1003		205	consensus Actin filament-coating protein tropomyos	92.97
PF14988		206	DUF4515: Domain of unknown function (DUF4515)	92.89
PF14915		305	CCDC144C: CCDC144C protein coiled-coil region	92.86
KOG0980		980	consensus Actin-binding protein SLA2/Huntingtin-in	92.77
PF15254		861	CCDC14: Coiled-coil domain-containing protein 14	92.71
PRK06620		214	hypothetical protein; Validated	92.68
PF12325		120	TMF_TATA_bd: TATA element modulatory factor 1 TATA	92.37
KOG1937		521	consensus Uncharacterized conserved protein [Funct	92.37
PF13851		201	GAS: Growth-arrest specific micro-tubule binding	92.28
PF06160		560	EzrA: Septation ring formation regulator, EzrA ; I	92.04
KOG4807		593	consensus F-actin binding protein, regulates actin	91.99
KOG0018		1141	consensus Structural maintenance of chromosome pro	91.97
PF06705		247	SF-assemblin: SF-assemblin/beta giardin	91.86
COG0419		908	SbcC ATPase involved in DNA repair [DNA replicatio	91.64
TIGR03007		498	pepcterm_ChnLen polysaccharide chain length determ	91.52
PRK09087		226	hypothetical protein; Validated	91.52
PF07926		132	TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro:	91.45
PF15619		194	Lebercilin: Ciliary protein causing Leber congenit	91.41
PF10168		717	Nup88: Nuclear pore component; InterPro: IPR019321	91.26
PF15254		861	CCDC14: Coiled-coil domain-containing protein 14	91.04
PF06785		401	UPF0242: Uncharacterised protein family (UPF0242);	90.91
TIGR03185		650	DNA_S_dndD DNA sulfur modification protein DndD. T	90.89
KOG4302		660	consensus Microtubule-associated protein essential	90.82
KOG4807		593	consensus F-actin binding protein, regulates actin	90.74
TIGR01005		754	eps_transp_fam exopolysaccharide transport protein	90.65
KOG1853		333	consensus LIS1-interacting protein NUDE [Cytoskele	90.41
PF05010		207	TACC: Transforming acidic coiled-coil-containing p	90.39
smart00787		312	Spc7 Spc7 kinetochore protein. This domain is foun	90.14
KOG1853		333	consensus LIS1-interacting protein NUDE [Cytoskele	89.9
KOG0962		1294	consensus DNA repair protein RAD50, ABC-type ATPas	89.81
TIGR03007		498	pepcterm_ChnLen polysaccharide chain length determ	89.8
PF15450		531	DUF4631: Domain of unknown function (DUF4631)	89.75
PF11559		151	ADIP: Afadin- and alpha -actinin-Binding; InterPro	89.6
PRK14086		617	dnaA chromosomal replication initiation protein; P	89.48
PRK14088		440	dnaA chromosomal replication initiation protein; P	89.46
PRK00149		450	dnaA chromosomal replication initiation protein; R	89.35
TIGR01005		754	eps_transp_fam exopolysaccharide transport protein	89.34
PF10473		140	CENP-F_leu_zip: Leucine-rich repeats of kinetochor	89.14
TIGR00631		655	uvrb excinuclease ABC, B subunit. This family is b	89.04
COG2804		500	PulE Type II secretory pathway, ATPase PulE/Tfp pi	88.95
KOG0804		493	consensus Cytoplasmic Zn-finger protein BRAP2 (BRC	88.95
PF12325		120	TMF_TATA_bd: TATA element modulatory factor 1 TATA	88.86
PRK05642		234	DNA replication initiation factor; Validated	88.43
COG0593		408	DnaA ATPase involved in DNA replication initiation	87.84
PF10473		140	CENP-F_leu_zip: Leucine-rich repeats of kinetochor	87.76
COG1474		366	CDC6 Cdc6-related protein, AAA superfamily ATPase	87.47
PF10168		717	Nup88: Nuclear pore component; InterPro: IPR019321	87.47
PF07926		132	TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro:	87.28
smart00787		312	Spc7 Spc7 kinetochore protein. This domain is foun	86.92
KOG1899		861	consensus LAR transmembrane tyrosine phosphatase-i	86.9
KOG4593		716	consensus Mitotic checkpoint protein MAD1 [Cell cy	86.89
PF00769		246	ERM: Ezrin/radixin/moesin family; InterPro: IPR011	86.69
KOG0979		1072	consensus Structural maintenance of chromosome pro	86.55
TIGR02680		1353	conserved hypothetical protein TIGR02680. Members	86.49
PRK08084		235	DNA replication initiation factor; Provisional	86.42
TIGR00362		405	DnaA chromosomal replication initiator protein Dna	86.4
PRK12377		248	putative replication protein; Provisional	86.25
PRK06526		254	transposase; Provisional	86.21
PRK08727		233	hypothetical protein; Validated	85.95
KOG1899		861	consensus LAR transmembrane tyrosine phosphatase-i	85.87
PF00769		246	ERM: Ezrin/radixin/moesin family; InterPro: IPR011	85.67
PF04851		184	ResIII: Type III restriction enzyme, res subunit;	85.66
PF04849		306	HAP1_N: HAP1 N-terminal conserved region; InterPro	85.52
PRK00411		394	cdc6 cell division control protein 6; Reviewed	85.49
COG1340		294	Uncharacterized archaeal coiled-coil protein [Func	85.47
TIGR03420		226	DnaA_homol_Hda DnaA regulatory inactivator Hda. Me	85.22
PRK08903		227	DnaA regulatory inactivator Hda; Validated	85.09
PRK14087		450	dnaA chromosomal replication initiation protein; P	85.06
PRK08116		268	hypothetical protein; Validated	84.81
PRK10929		1109	putative mechanosensitive channel protein; Provisi	84.72
cd00009		151	AAA The AAA+ (ATPases Associated with a wide varie	84.64
PF13245		76	AAA_19: Part of AAA domain	84.57
COG5008		375	PilU Tfp pilus assembly protein, ATPase PilU [Cell	84.47
PRK07952		244	DNA replication protein DnaC; Validated	84.18
PF04111		314	APG6: Autophagy protein Apg6; InterPro: IPR007243	84.0
PF08317		325	Spc7: Spc7 kinetochore protein; InterPro: IPR01325	83.93
PF13851		201	GAS: Growth-arrest specific micro-tubule binding	83.77
PRK11281		1113	hypothetical protein; Provisional	83.61
TIGR02928		365	orc1/cdc6 family replication initiation protein. M	83.48
PLN02939		977	transferase, transferring glycosyl groups	83.4
COG1382		119	GimC Prefoldin, chaperonin cofactor [Posttranslati	83.33
smart00053		240	DYNc Dynamin, GTPase. Large GTPases that mediate v	83.26
PF09730		717	BicD: Microtubule-associated protein Bicaudal-D; I	83.14
TIGR01843		423	type_I_hlyD type I secretion membrane fusion prote	83.01
COG2433		652	Uncharacterized conserved protein [Function unknow	82.29
PRK13729		475	conjugal transfer pilus assembly protein TraB; Pro	82.26
PRK08181		269	transposase; Validated	82.2
PF04111		314	APG6: Autophagy protein Apg6; InterPro: IPR007243	82.15
TIGR01420		343	pilT_fam pilus retraction protein PilT. This model	81.91
PF15294		278	Leu_zip: Leucine zipper	81.81
PF14988		206	DUF4515: Domain of unknown function (DUF4515)	81.74
PRK10436		462	hypothetical protein; Provisional	81.27
KOG0978		698	consensus E3 ubiquitin ligase involved in syntaxin	80.97
KOG0804		493	consensus Cytoplasmic Zn-finger protein BRAP2 (BRC	80.81
PF08232		134	Striatin: Striatin family; InterPro: IPR013258 Thi	80.52
PF02456		369	Adeno_IVa2: Adenovirus IVa2 protein; InterPro: IPR	80.49
TIGR02533		486	type_II_gspE general secretory pathway protein E.	80.22
TIGR01843		423	type_I_hlyD type I secretion membrane fusion prote	80.13

>KOG0244 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

Probab=100.00  E-value=3.1e-110  Score=976.74  Aligned_cols=821  Identities=42%  Similarity=0.583  Sum_probs=702.7

Q ss_pred             eCCCCCcccccCCCceEEEeCCCCceeecC-ceeeeceeeCCCCCChHHHHHHhhhhhHHHhhcCCceeEEEeccCCCCc
Q 001669           17 VRPLIGDERAQGCKDCVAVVPGKPQVQIGT-HSFTFDHVYGSTGSPSSAMFDECIAPLVDGLFQGYNATVLAYGQTGSGK   95 (1034)
Q Consensus        17 iRP~~~~E~~~~~~~~v~~~~~~~~v~~~~-~~f~FD~Vf~~~~~~q~~v~~~~~~plv~~~l~G~n~ti~ayG~tgSGK   95 (1034)
                      |||+...|..+||+.|+.+.|+.|+|.++. .+|+||+||... ++|.++|+.||.|+++.+|.|||+||+|||||||||
T Consensus         1 vRpl~~~e~~~g~~~c~~~~~~~pqv~ig~~~s~t~d~v~~~~-~~Q~~~~e~~V~~l~~~lf~gynatvlaygQtgsgk   79 (913)
T KOG0244|consen    1 VRPLKQMEEEQGCRRCTEVSPRTPQVAIGKDASFTYDKVFLDL-ESQKEVYESCVRPLREKLFAGYNATVLAYGQTGSGK   79 (913)
T ss_pred             CCCccchHHHhcchhhcccCCCCCceeecCCcceeeeeeccCc-hHHHHHHHHHHHHHHHHHhhhhcceeeeecccCCCc
Confidence            799999999999999999999999999975 689999999864 569999999999999999999999999999999999


Q ss_pred             ceeccCCCCCCCCc-ccHhHHHHHHHHHHHhcccCccEEEEEeeeeechhhhhhcCCCCCCCCCCCCCCCCCcccCCCCC
Q 001669           96 TYTMGTGFKDGYQT-GIIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVRDLLDPPCLNKPDTANGHTGKVTVPGKP  174 (1034)
Q Consensus        96 T~Tm~g~~~~~~~~-Glipr~~~~LF~~i~~~~~~~~~~v~vS~~EIy~e~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~  174 (1034)
                      |||||+++...... |+|||++.+||.+|..... ..|.|.|||+|||++.|+|||.|..                 ...
T Consensus        80 Tytmgt~~~~~~~~~Gvipr~v~~~f~~i~~~~~-~~f~i~vs~vely~e~v~dl~~~~~-----------------~~~  141 (913)
T KOG0244|consen   80 TYTMGTNDAPAQDTVGVIPRAVSTLFTRIGKTES-FVFRITVSFVELYNEEVLDLLKPSR-----------------LKA  141 (913)
T ss_pred             eeecccccccccccCCcCcchHHHHHHHHHhhhc-cceeeeeeeeeccchhhhhhcChhh-----------------hhh
Confidence            99999987655445 9999999999999998654 8899999999999999999998643                 123


Q ss_pred             CceeEecCCCcEEEcCceEEEeCCHHHHHHHHHHcccccccccCCCCCCCCCceEEEEEEEEeeeccCCCcCCCCCCCCC
Q 001669          175 PIQIRETSNGVITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNES  254 (1034)
Q Consensus       175 ~l~i~e~~~~~~~v~gl~e~~v~s~~e~~~~l~~g~~~R~~~st~~n~~SSRSH~if~i~v~q~~~~~~~~~~~~~~~~~  254 (1034)
                      ++.+++ +.|++.+.|++++.|.+..++..+|..|...|++++|+||.+|||||+||||++++......           
T Consensus       142 ~i~~~e-~~g~it~~glte~tv~~~~q~~~~L~~g~~~RtvasTnMN~qssRshAifti~lkq~kk~~~-----------  209 (913)
T KOG0244|consen  142 NIKLRE-PKGEITIRGLTEKTVRMKLQLLSRLEKGSLERTVASTNMNAQSSRSHAIFTITLKQRKKLSK-----------  209 (913)
T ss_pred             ceeccc-cCCceEEEeehHHHHHHHHHHHHHHHhchHHHHHHHHhcchhhhhhhHHHHHHHHHHHHhhc-----------
Confidence            478888 88999999999999999999999999999999999999999999999999999998766432           


Q ss_pred             CCccEEEeEEeEeeCCCCccccccCCchhhhhhhHHHHhhhHHhHHHHHHhhccccCCCCccccCCCchhhhhhhhcCCC
Q 001669          255 MNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGG  334 (1034)
Q Consensus       255 ~~~~~~~s~l~~VDLAGsEr~~~t~~~g~r~kE~~~IN~SL~aL~~vi~aL~~~~~~~~~~~iPyRdSkLTrlLq~sLgg  334 (1034)
                        ...++++|||||||||||.++|+++|.|++||++||.+|++|||||++|++.++   .+|||||||+|||||||+|||
T Consensus       210 --~s~~~sKlhlVDLAGSER~kkT~a~gdrlKEgInIN~gLL~LgnVIsaLg~~kk---~~~vpyRdSkltrlLQdslgG  284 (913)
T KOG0244|consen  210 --RSSFCSKLHLVDLAGSERVKKTKAEGDRLKEGININGGLLALGNVISALGEAKK---GGEVPYRDSKLTRLLQDSLGG  284 (913)
T ss_pred             --cchhhhhhheeeccccccccccccchhhhhhccCcchHHHHHHHHHHHHHhhhc---CCcccchHHHHHHHHHHHhcC
Confidence              336789999999999999999999999999999999999999999999998865   679999999999999999999


Q ss_pred             CceeEEEeecCCCccCHHHHHHHHHHHHHHhcccCCcccccCCccHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHH
Q 001669          335 NSRTVMIACISPADINAEETLNTLKYANRARNIQNKPIVNRDPMSTEMLKMRQQLEFLQAELCARGGGSSSDEVQVLKER  414 (1034)
Q Consensus       335 ns~t~~I~~vsp~~~~~~eTl~TL~fa~rar~I~~kp~vN~d~~~~ei~~Lr~ql~~L~~eL~~~~~~~~~~~~~~L~e~  414 (1034)
                      |++|+||+||||++.|++||++||+||+||++|+|||++|.|+...++..|+.||+.|+.+|....+.....++..+..+
T Consensus       285 ns~tlmiaCiSpadsn~~EtlnTl~ya~Rak~iknk~vvN~d~~~~~~~~lK~ql~~l~~ell~~~~~~~~~ei~sl~~e  364 (913)
T KOG0244|consen  285 NSDTLMIACISPADSNAQETLNTLRYADRAKQIKNKPVVNQDPKSFEMLKLKAQLEPLQVELLSKAGDELDAEINSLPFE  364 (913)
T ss_pred             CcceeeeeecChhhhhhhhHHHHHHHhhHHHHhcccccccccHHHHHHHHHHHHHHHHHHHHHhhccccchhHHhhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999665444455788899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhhhcC-CCCcccHHHHHHHhh------------hhhccccccccc----C
Q 001669          415 IAWLEAANEDLCRELHEYRSRCTDVEQRETDAQDG-SPCPLKSDGLKRSLN------------SIEQTDYQMGEN----I  477 (1034)
Q Consensus       415 i~~Le~en~~L~~el~~~~e~~~~l~~~~~~~~~~-~~l~~~i~eLe~~L~------------~~~~~~~~~~e~----~  477 (1034)
                      +..++..+..+..++.+....|.....+...++.. ..+...+......+.            .+...-.+++..    .
T Consensus       365 ~~~l~~~~d~~~~e~~e~~s~~s~~~~~~~~~~~~k~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~v~~~~~e~~  444 (913)
T KOG0244|consen  365 NVTLEETLDALLQEKGEERSTLSSKSLKLTGAEKEKDKLRRRTDSCMNLLSEDSNEDASDKSASLPKPLEPVDSGTEEIG  444 (913)
T ss_pred             hhhhhhhHHHHhcchhhhhhhhhHHHHhcchhhhhHHHHHHHHHHHHHHHHHhHhHHhhhccccCCcccccccccccccc
Confidence            99999999999999988888775554443322211 111111111110000            011111111111    0


Q ss_pred             -----CCCChhhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--chHHHHHHHHHHHHHHHHHHHHHHHH
Q 001669          478 -----TGDSREIDEVAKEWEHTLLQNSMDKELNELNRRLEEKESEMKLVGGS--DTAALKQHFGKKIAELEDEKRTVQKE  550 (1034)
Q Consensus       478 -----~~~~~~~ee~~~e~E~~~~q~~l~~el~eL~~~L~~kE~el~~l~~~--~~~~lk~~~e~ki~eLe~ei~~l~~e  550 (1034)
                           .++...........++...|..+..++.+++++|..||..+..+...  .....+++|+.++..|+.++..++.|
T Consensus       445 ~~~~~~~~e~~~~~~~~~~~~~~~q~~ls~el~el~k~l~~Ke~l~rr~~~~~~~~~~~~~~~e~~~~~le~e~~~le~E  524 (913)
T KOG0244|consen  445 MNTDTSGDEAAEKELSETIGHPQKQGSLSGELSELEKRLAEKEPLTRRKAYEKAEKSKAKEQYESDSGTLEAEKSPLESE  524 (913)
T ss_pred             ccccCCCchhhhcccccCccchHHHhhhhHHHHHHHhhhccccHHHHHHHHhhhhhhHHHHHHhhhhhhHHHHhcccccc
Confidence                 11111111224557788889999999999999999999999998753  46678999999999999999999999


Q ss_pred             HHHHHHHHHhhcCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 001669          551 RDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDLKKKQENQVQLLKQKQKSDEAAKRLQDEIQFIKAQKVQLQH  630 (1034)
Q Consensus       551 ~~~L~~el~~~~~~~~~~~~kl~~~~e~kl~eLe~ql~dL~~k~~~~~~l~k~k~k~ee~~~~Le~ei~~~K~~k~~l~r  630 (1034)
                      ++.+..++...    ...+.++.+.+.++++.|+.++++|+++...+..|.+.+.+.+.....|..+|..+|.++++|++
T Consensus       525 ~~~l~~el~~~----~~~~~kl~eer~qklk~le~q~s~lkk~l~~~~~l~~~~~~~~~~~~kl~~ei~~~k~~kv~l~~  600 (913)
T KOG0244|consen  525 RSRLRNELNVF----NRLAAKLGEERVQKLKSLETQISLLKKKLSSQRKLIKPKPKSEGIRAKLLQEIHIAKGQKVQLLR  600 (913)
T ss_pred             cHHHHHHHHhh----hHHHHHhhhHHHHHHHHHHHHHHHHHHhhHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999998    33889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-cccccc
Q 001669          631 RIKQEAEQFRQWKASREKELLQLRKEGRRNEYERHKLQALNQRQKLVLQRKTEEAAMATKRLKELLESRKSSA-RENSAV  709 (1034)
Q Consensus       631 kl~~E~~~~r~~k~~~eke~~qLk~e~rk~e~el~~Lq~~~e~q~~vlkrk~eE~~a~~k~Lke~le~~k~~~-r~~~~~  709 (1034)
                      +|+++.+.|+.|++..+|+..+++.+.++.++++..++....++..+|+++++|+.+++++|++++..++... .....+
T Consensus       601 ~~~~d~ekfr~~K~~~~Ke~~qlk~~~rk~~~~~~~~~~l~~~q~~vl~~kt~eas~~~krlk~a~~~r~~~~s~~~~~~  680 (913)
T KOG0244|consen  601 VMKEDAEKFRQWKDRTEKEWNQLKGQERKSEGEHPKLEVLVKKQNYVLQRKTEEASAANKRLKEALCIRALTSSGQVTLG  680 (913)
T ss_pred             HHhhhHHHHHHHHHHHHHHHHHHhccchhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccchh
Confidence            9999999999999999999999999999999999999999999999999999999999999999999988552 222211


Q ss_pred             ccCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcCCCCCCccccchhhhcCC
Q 001669          710 TNGNLTNGQSNEKSFQRWLDHELEVMVNVHEVRFDYEKQSQVRAALAEELAVLKQVDEFASKGLSPPRGKNGFARVSSMS  789 (1034)
Q Consensus       710 ~~~~~~~~~~~~~~~k~wl~~ElE~~~~l~e~~~~~~~~~e~r~~l~~EL~~L~~~~e~~~~~~~~~~~~~~~~~~~~~~  789 (1034)
                      .      ......+...|+.+|+|++..+.+++..+..+.+.|+.++.++..++...                       
T Consensus       681 ~------~~~~~~~~~~~~~~e~ei~~~~~~~~~~l~~~~~~ra~~~~d~~~~r~~~-----------------------  731 (913)
T KOG0244|consen  681 D------NGASTSRTVAWPSNEIEINQIALNPRGTLLYAAEERAVRMWDLKRLRSEG-----------------------  731 (913)
T ss_pred             h------cCchhHHHHHHhccchHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------
Confidence            2      22566788999999999999999999999999999999999999986542                       


Q ss_pred             hHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhccccchhhcccHHHHHHHHHHHHHHHHHHHHHHHH------
Q 001669          790 PNARMARISSLENMLSISSNSLVAMASQLSEAEERDRLFTNRGRWNQLRSMADAKNLLQYMFNSLADARCQLWE------  863 (1034)
Q Consensus       790 ~~~~~~qi~~Le~~~~~~~~~~~~l~~~l~e~e~~~~~~~~~~~~~~irsl~eak~~l~~l~~~~~~~r~ql~e------  863 (1034)
                          ...|..|+.++...+++|++|...+..++.+.+.+.   +|+++.++.+|++.+.++++.++..+++...      
T Consensus       732 ----~k~l~~L~~~~~~~~~~i~s~~~~i~~a~~d~~~~~---~w~~v~t~~~ak~~~~~~~~~~~~~r~~~~~~~~~~r  804 (913)
T KOG0244|consen  732 ----KKLLGSLEPVMELTSDQISSMQDLIITASKDERIKM---RWEAVGTLSEAKNFEPYLYDGIVALRIQGDNLFSGSR  804 (913)
T ss_pred             ----HHHHhhhHHHHHHHHHHHHhHHhhhcccccchhHHH---HHhcccccccchhhhHHHHHHHHHHHHHHHHHhhhhh
Confidence                378899999999999999999999999988776443   9999999999999999999999999998884      


Q ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 001669          864 -KDIEIKEMKEQLKELVGLLRQSEVRRKEVEEELKLREQAVAITLARSASG  913 (1034)
Q Consensus       864 -~~~~l~e~~~~~~el~~~~~~le~e~~el~~~l~~~e~~~~~l~~~~~~~  913 (1034)
                       ....+.+++.++.+....++..+.+......+.....+.+..++....+.
T Consensus       805 e~~~~~~~l~~kl~~~q~~~rk~e~~~~~~v~e~~~~~~~~~~~~~~~~~~  855 (913)
T KOG0244|consen  805 EKGIKKWDLTQKLLDEQVNLRKDEVQALGVVPEHPVLLSGCKGGILKVWQM  855 (913)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence             44556666666665555666677777776666776666666666655543

>KOG0243 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>KOG0245 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>KOG4280 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>KOG0240 consensus Kinesin (SMY1 subfamily) [Cytoskeleton]	Back alignment and domain information

>PLN03188 kinesin-12 family protein; Provisional	Back alignment and domain information

>KOG0241 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>KOG0242 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup	Back alignment and domain information

>cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup	Back alignment and domain information

>cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup	Back alignment and domain information

>cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins	Back alignment and domain information

>cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division	Back alignment and domain information

>cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily	Back alignment and domain information

>cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins	Back alignment and domain information

>cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup	Back alignment and domain information

>cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group	Back alignment and domain information

>cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup	Back alignment and domain information

>cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling	Back alignment and domain information

>cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis	Back alignment and domain information

>cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins	Back alignment and domain information

>smart00129 KISc Kinesin motor, catalytic domain	Back alignment and domain information

>KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton]	Back alignment and domain information

>KOG0246 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>KOG0247 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport	Back alignment and domain information

>cd00106 KISc Kinesin motor domain	Back alignment and domain information

>COG5059 KIP1 Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>cd01363 Motor_domain Myosin and Kinesin motor domain	Back alignment and domain information

>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]	Back alignment and domain information

>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]	Back alignment and domain information

>PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril	Back alignment and domain information

>PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril	Back alignment and domain information

>PRK02224 chromosome segregation protein; Provisional	Back alignment and domain information

>PRK02224 chromosome segregation protein; Provisional	Back alignment and domain information

>KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown]	Back alignment and domain information

>PRK03918 chromosome segregation protein; Provisional	Back alignment and domain information

>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT)	Back alignment and domain information

>TIGR00606 rad50 rad50	Back alignment and domain information

>PRK03918 chromosome segregation protein; Provisional	Back alignment and domain information

>KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown]	Back alignment and domain information

>KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown]	Back alignment and domain information

>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT)	Back alignment and domain information

>TIGR00606 rad50 rad50	Back alignment and domain information

>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]	Back alignment and domain information

>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures]	Back alignment and domain information

>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins	Back alignment and domain information

>KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown]	Back alignment and domain information

>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope	Back alignment and domain information

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]	Back alignment and domain information

>KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]	Back alignment and domain information

>KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure]	Back alignment and domain information

>PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion []	Back alignment and domain information

>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins	Back alignment and domain information

>KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription]	Back alignment and domain information

>KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription]	Back alignment and domain information

>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion []	Back alignment and domain information

>PRK01156 chromosome segregation protein; Provisional	Back alignment and domain information

>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope	Back alignment and domain information

>KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]	Back alignment and domain information

>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>COG5059 KIP1 Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure]	Back alignment and domain information

>KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms]	Back alignment and domain information

>KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription]	Back alignment and domain information

>KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes	Back alignment and domain information

>PRK04863 mukB cell division protein MukB; Provisional	Back alignment and domain information

>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PRK01156 chromosome segregation protein; Provisional	Back alignment and domain information

>PRK11637 AmiB activator; Provisional	Back alignment and domain information

>PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function	Back alignment and domain information

>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes	Back alignment and domain information

>PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function	Back alignment and domain information

>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells	Back alignment and domain information

>PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex	Back alignment and domain information

>KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PRK04778 septation ring formation regulator EzrA; Provisional	Back alignment and domain information

>PHA02562 46 endonuclease subunit; Provisional	Back alignment and domain information

>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair]	Back alignment and domain information

>PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain	Back alignment and domain information

>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function	Back alignment and domain information

>KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins	Back alignment and domain information

>PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain	Back alignment and domain information

>PF15066 CAGE1: Cancer-associated gene protein 1 family	Back alignment and domain information

>KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms]	Back alignment and domain information

>KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PHA02562 46 endonuclease subunit; Provisional	Back alignment and domain information

>COG0556 UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair]	Back alignment and domain information

>PRK10929 putative mechanosensitive channel protein; Provisional	Back alignment and domain information

>PRK11281 hypothetical protein; Provisional	Back alignment and domain information

>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells	Back alignment and domain information

>PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5	Back alignment and domain information

>COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	Back alignment and domain information

>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures]	Back alignment and domain information

>COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only]	Back alignment and domain information

>PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins	Back alignment and domain information

>KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown]	Back alignment and domain information

>KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown]	Back alignment and domain information

>COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>PRK04778 septation ring formation regulator EzrA; Provisional	Back alignment and domain information

>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair]	Back alignment and domain information

>KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore []	Back alignment and domain information

>PF05010 TACC: Transforming acidic coiled-coil-containing protein (TACC); InterPro: IPR007707 This family contains the proteins TACC 1, 2 and 3, found concentrated in the centrosomes of eukaryotes which may play a conserved role in organising centrosomal microtubules	Back alignment and domain information

>PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms	Back alignment and domain information

>PRK04863 mukB cell division protein MukB; Provisional	Back alignment and domain information

>COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	Back alignment and domain information

>PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) []	Back alignment and domain information

>KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription]	Back alignment and domain information

>COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown]	Back alignment and domain information

>COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown]	Back alignment and domain information

>KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF15066 CAGE1: Cancer-associated gene protein 1 family	Back alignment and domain information

>PRK09039 hypothetical protein; Validated	Back alignment and domain information

>PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5	Back alignment and domain information

>COG3883 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues	Back alignment and domain information

>COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning]	Back alignment and domain information

>COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only]	Back alignment and domain information

>COG3883 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>PF14662 CCDC155: Coiled-coil region of CCDC155	Back alignment and domain information

>PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function	Back alignment and domain information

>PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease	Back alignment and domain information

>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells	Back alignment and domain information

>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells	Back alignment and domain information

>KOG0962 consensus DNA repair protein RAD50, ABC-type ATPase/SMC superfamily [Replication, recombination and repair]	Back alignment and domain information

>PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms	Back alignment and domain information

>PRK09039 hypothetical protein; Validated	Back alignment and domain information

>PF15397 DUF4618: Domain of unknown function (DUF4618)	Back alignment and domain information

>PF09728 Taxilin: Myosin-like coiled-coil protein; InterPro: IPR019132 Taxilin contains an extraordinarily long coiled-coil domain in its C-terminal half and is ubiquitously expressed	Back alignment and domain information

>PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication	Back alignment and domain information

>KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton]	Back alignment and domain information

>PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex	Back alignment and domain information

>COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion]	Back alignment and domain information

>KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore []	Back alignment and domain information

>PF09787 Golgin_A5: Golgin subfamily A member 5; InterPro: IPR019177 This entry represents a family of proteins involved in maintaining Golgi structure	Back alignment and domain information

>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association []	Back alignment and domain information

>COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown]	Back alignment and domain information

>PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site	Back alignment and domain information

>PF14662 CCDC155: Coiled-coil region of CCDC155	Back alignment and domain information

>KOG1850 consensus Myosin-like coiled-coil protein [Cytoskeleton]	Back alignment and domain information

>PRK06893 DNA replication initiation factor; Validated	Back alignment and domain information

>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD	Back alignment and domain information

>KOG1003 consensus Actin filament-coating protein tropomyosin [Cytoskeleton]	Back alignment and domain information

>PF14988 DUF4515: Domain of unknown function (DUF4515)	Back alignment and domain information

>PF14915 CCDC144C: CCDC144C protein coiled-coil region	Back alignment and domain information

>KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton]	Back alignment and domain information

>PF15254 CCDC14: Coiled-coil domain-containing protein 14	Back alignment and domain information

>PRK06620 hypothetical protein; Validated	Back alignment and domain information

>PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes []	Back alignment and domain information

>KOG1937 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF13851 GAS: Growth-arrest specific micro-tubule binding	Back alignment and domain information

>PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site	Back alignment and domain information

>KOG4807 consensus F-actin binding protein, regulates actin cytoskeletal organization [Cytoskeleton]	Back alignment and domain information

>KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PF06705 SF-assemblin: SF-assemblin/beta giardin	Back alignment and domain information

>COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily	Back alignment and domain information

>PRK09087 hypothetical protein; Validated	Back alignment and domain information

>PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT)	Back alignment and domain information

>PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease	Back alignment and domain information

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs	Back alignment and domain information

>PF15254 CCDC14: Coiled-coil domain-containing protein 14	Back alignment and domain information

>PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function	Back alignment and domain information

>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD	Back alignment and domain information

>KOG4302 consensus Microtubule-associated protein essential for anaphase spindle elongation [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]	Back alignment and domain information

>KOG4807 consensus F-actin binding protein, regulates actin cytoskeletal organization [Cytoskeleton]	Back alignment and domain information

>TIGR01005 eps_transp_fam exopolysaccharide transport protein family	Back alignment and domain information

>KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton]	Back alignment and domain information

>PF05010 TACC: Transforming acidic coiled-coil-containing protein (TACC); InterPro: IPR007707 This family contains the proteins TACC 1, 2 and 3, found concentrated in the centrosomes of eukaryotes which may play a conserved role in organising centrosomal microtubules	Back alignment and domain information

>smart00787 Spc7 Spc7 kinetochore protein	Back alignment and domain information

>KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton]	Back alignment and domain information

>KOG0962 consensus DNA repair protein RAD50, ABC-type ATPase/SMC superfamily [Replication, recombination and repair]	Back alignment and domain information

>TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily	Back alignment and domain information

>PF15450 DUF4631: Domain of unknown function (DUF4631)	Back alignment and domain information

>PF11559 ADIP: Afadin- and alpha -actinin-Binding; InterPro: IPR021622 This family is found in mammals where it is localised at cell-cell adherens junctions [], and in Sch	Back alignment and domain information

>PRK14086 dnaA chromosomal replication initiation protein; Provisional	Back alignment and domain information

>PRK14088 dnaA chromosomal replication initiation protein; Provisional	Back alignment and domain information

>PRK00149 dnaA chromosomal replication initiation protein; Reviewed	Back alignment and domain information

>TIGR01005 eps_transp_fam exopolysaccharide transport protein family	Back alignment and domain information

>PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ]	Back alignment and domain information

>TIGR00631 uvrb excinuclease ABC, B subunit	Back alignment and domain information

>COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion]	Back alignment and domain information

>KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only]	Back alignment and domain information

>PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes []	Back alignment and domain information

>PRK05642 DNA replication initiation factor; Validated	Back alignment and domain information

>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair]	Back alignment and domain information

>PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ]	Back alignment and domain information

>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs	Back alignment and domain information

>PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT)	Back alignment and domain information

>smart00787 Spc7 Spc7 kinetochore protein	Back alignment and domain information

>KOG1899 consensus LAR transmembrane tyrosine phosphatase-interacting protein liprin [General function prediction only]	Back alignment and domain information

>KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PF00769 ERM: Ezrin/radixin/moesin family; InterPro: IPR011259 The ERM family consists of three closely-related proteins, ezrin, radixin and moesin []	Back alignment and domain information

>KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair]	Back alignment and domain information

>TIGR02680 conserved hypothetical protein TIGR02680	Back alignment and domain information

>PRK08084 DNA replication initiation factor; Provisional	Back alignment and domain information

>TIGR00362 DnaA chromosomal replication initiator protein DnaA	Back alignment and domain information

>PRK12377 putative replication protein; Provisional	Back alignment and domain information

>PRK06526 transposase; Provisional	Back alignment and domain information

>PRK08727 hypothetical protein; Validated	Back alignment and domain information

>KOG1899 consensus LAR transmembrane tyrosine phosphatase-interacting protein liprin [General function prediction only]	Back alignment and domain information

>PF00769 ERM: Ezrin/radixin/moesin family; InterPro: IPR011259 The ERM family consists of three closely-related proteins, ezrin, radixin and moesin []	Back alignment and domain information

>PF04851 ResIII: Type III restriction enzyme, res subunit; InterPro: IPR006935 This entry represents a domain found in the N terminus of several proteins, including helicases, the R subunit (HsdR) of type I restriction endonucleases (3	Back alignment and domain information

>PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues	Back alignment and domain information

>PRK00411 cdc6 cell division control protein 6; Reviewed	Back alignment and domain information

>COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown]	Back alignment and domain information

>TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda	Back alignment and domain information

>PRK08903 DnaA regulatory inactivator Hda; Validated	Back alignment and domain information

>PRK14087 dnaA chromosomal replication initiation protein; Provisional	Back alignment and domain information

>PRK08116 hypothetical protein; Validated	Back alignment and domain information

>PRK10929 putative mechanosensitive channel protein; Provisional	Back alignment and domain information

>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold	Back alignment and domain information

>PF13245 AAA_19: Part of AAA domain	Back alignment and domain information

>COG5008 PilU Tfp pilus assembly protein, ATPase PilU [Cell motility and secretion / Intracellular trafficking and secretion]	Back alignment and domain information

>PRK07952 DNA replication protein DnaC; Validated	Back alignment and domain information

>PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells	Back alignment and domain information

>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association []	Back alignment and domain information

>PF13851 GAS: Growth-arrest specific micro-tubule binding	Back alignment and domain information

>PRK11281 hypothetical protein; Provisional	Back alignment and domain information

>TIGR02928 orc1/cdc6 family replication initiation protein	Back alignment and domain information

>PLN02939 transferase, transferring glycosyl groups	Back alignment and domain information

>COG1382 GimC Prefoldin, chaperonin cofactor [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>smart00053 DYNc Dynamin, GTPase	Back alignment and domain information

>PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) []	Back alignment and domain information

>TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family	Back alignment and domain information

>COG2433 Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PRK13729 conjugal transfer pilus assembly protein TraB; Provisional	Back alignment and domain information

>PRK08181 transposase; Validated	Back alignment and domain information

>PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells	Back alignment and domain information

>TIGR01420 pilT_fam pilus retraction protein PilT	Back alignment and domain information

>PF15294 Leu_zip: Leucine zipper	Back alignment and domain information

>PF14988 DUF4515: Domain of unknown function (DUF4515)	Back alignment and domain information

>PRK10436 hypothetical protein; Provisional	Back alignment and domain information

>KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only]	Back alignment and domain information

>PF08232 Striatin: Striatin family; InterPro: IPR013258 This domain is associated with the N terminus of striatin	Back alignment and domain information

>PF02456 Adeno_IVa2: Adenovirus IVa2 protein; InterPro: IPR003389 Va2 protein can interact with the adenoviral packaging signal and this interaction involves DNA sequences that have previously been demonstrated to be required for packaging []	Back alignment and domain information

>TIGR02533 type_II_gspE general secretory pathway protein E	Back alignment and domain information

>TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family	Back alignment and domain information

Homologous Structure Templates