Citrus Sinensis ID: 001705
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1024 | 2.2.26 [Sep-21-2011] | |||||||
| F4JLK2 | 1050 | Probable sucrose-phosphat | yes | no | 1.0 | 0.975 | 0.72 | 0.0 | |
| O04933 | 1081 | Probable sucrose-phosphat | N/A | no | 0.990 | 0.938 | 0.576 | 0.0 | |
| Q8RY24 | 1062 | Probable sucrose-phosphat | no | no | 0.987 | 0.951 | 0.571 | 0.0 | |
| P31927 | 1068 | Sucrose-phosphate synthas | N/A | no | 0.993 | 0.952 | 0.568 | 0.0 | |
| Q0JGK4 | 1084 | Probable sucrose-phosphat | yes | no | 0.989 | 0.934 | 0.559 | 0.0 | |
| A2WYE9 | 1084 | Probable sucrose-phosphat | N/A | no | 0.989 | 0.934 | 0.559 | 0.0 | |
| O22060 | 1057 | Probable sucrose-phosphat | N/A | no | 0.974 | 0.944 | 0.556 | 0.0 | |
| P31928 | 1056 | Sucrose-phosphate synthas | N/A | no | 0.982 | 0.952 | 0.544 | 0.0 | |
| P49031 | 1045 | Probable sucrose-phosphat | N/A | no | 0.974 | 0.955 | 0.548 | 0.0 | |
| Q94BT0 | 1043 | Sucrose-phosphate synthas | no | no | 0.973 | 0.955 | 0.552 | 0.0 |
| >sp|F4JLK2|SPSA4_ARATH Probable sucrose-phosphate synthase 4 OS=Arabidopsis thaliana GN=SPS4 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1565 bits (4052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 756/1050 (72%), Positives = 879/1050 (83%), Gaps = 26/1050 (2%)
Query: 1 MAGNEWINGYLEAILDAGSGKTKMNDGKFKL-SKFEETKQKEGQ---------------L 44
MA N+WIN YLEAILD G+ K K + K+ K + K+ Q +
Sbjct: 1 MARNDWINSYLEAILDVGTSKKKRFESNSKIVQKLGDINSKDHQEKVFGDMNGKDHQEKV 60
Query: 45 FSPTKYFVEEVINSFDESDLHRTWVKVIATRNTRERSNRLENMCWRIWHLARKKKQIAWE 104
FSP KYFVEEV+NSFDESDL++TW+KVIATRNTRERSNRLEN+CWRIWHLARKKKQI W+
Sbjct: 61 FSPIKYFVEEVVNSFDESDLYKTWIKVIATRNTRERSNRLENICWRIWHLARKKKQIVWD 120
Query: 105 DAQRLAKRRLEREQGRNDAADDL-SELSEGEKEKGDSINASESL--------KEIPRINS 155
D RL+KRR+EREQGRNDA +DL SELSEGEK+K D + +PRI S
Sbjct: 121 DGVRLSKRRIEREQGRNDAEEDLLSELSEGEKDKNDGEKEKSEVVTTLEPPRDHMPRIRS 180
Query: 156 DMQIWSEDDKSSRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVY 215
+MQIWSEDDKSSRNLYIVLISMHGLVRG+NME+GRDSDTGGQVKYVVELARALANTEGV+
Sbjct: 181 EMQIWSEDDKSSRNLYIVLISMHGLVRGENMELGRDSDTGGQVKYVVELARALANTEGVH 240
Query: 216 RVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWPYI 275
RVDLLTRQI+SPEVD SYGEP EMLSCP +G+ SCG+YIIRIPCG+RDKYI KESLWP+I
Sbjct: 241 RVDLLTRQISSPEVDYSYGEPVEMLSCPPEGSDSCGSYIIRIPCGSRDKYIPKESLWPHI 300
Query: 276 HEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGH 335
EFVDGALNHIV++AR++GEQVNGGKP WPYVIHGHYADAGEVAAHL+GALNVPMVLTGH
Sbjct: 301 PEFVDGALNHIVSIARSLGEQVNGGKPIWPYVIHGHYADAGEVAAHLAGALNVPMVLTGH 360
Query: 336 SLGRNKFEQLLKQGRLPK-DINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYD 394
SLGRNKFEQLL+QGR+ + DI+ +YKIMRRIEAEE LDA+EMVVTSTRQEI+ QWGLYD
Sbjct: 361 SLGRNKFEQLLQQGRITREDIDRTYKIMRRIEAEEQSLDAAEMVVTSTRQEIDAQWGLYD 420
Query: 395 GFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDR 454
GFD+KLERKLRVRR+RGVSC GR+MPRMVVIPPGMDFSYV TQD+ D DLKSLIG DR
Sbjct: 421 GFDIKLERKLRVRRRRGVSCLGRYMPRMVVIPPGMDFSYVLTQDSQEPDGDLKSLIGPDR 480
Query: 455 TQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLI 514
Q K+ +PP+WSE+MRFF+NPHKPTILALSRPD KKNVTTL+KAFGECQPLRELAN+ LI
Sbjct: 481 NQIKKPVPPIWSEIMRFFSNPHKPTILALSRPDHKKNVTTLVKAFGECQPLRELANLVLI 540
Query: 515 LGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFI 574
LGNRDDIE+M NSSSVVL VLKLID+YDLYGQVAYPKHHKQS+VPDIYRLAAKTKGVFI
Sbjct: 541 LGNRDDIEEMPNSSSVVLMNVLKLIDQYDLYGQVAYPKHHKQSEVPDIYRLAAKTKGVFI 600
Query: 575 NPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLA 634
NPALVEPFGLT+IEAAAYGLP+VAT+NGGPVDI+KALNNGLLVDPHDQ AI+DALLKL+A
Sbjct: 601 NPALVEPFGLTLIEAAAYGLPIVATRNGGPVDIVKALNNGLLVDPHDQQAISDALLKLVA 660
Query: 635 DKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNRHPNSHLEIMTIPGEPLSDSLRD 694
+K++W+ECRKNGLKNIHRFSWPEHCRNYLSHVEH RNRHP S L+IM +P E SDSLRD
Sbjct: 661 NKHLWAECRKNGLKNIHRFSWPEHCRNYLSHVEHCRNRHPTSSLDIMKVPEELTSDSLRD 720
Query: 695 VEDFSLRFSMEGDFKLNAELDAVTRQKNLIEAITQKASFNGNASVTHSPGRRQMLIVIAA 754
V+D SLRFS EGDF LN ELDA TRQK L++AI+Q S G ++ +SPGRRQML V+A
Sbjct: 721 VDDISLRFSTEGDFTLNGELDAGTRQKKLVDAISQMNSMKGCSAAIYSPGRRQMLFVVAV 780
Query: 755 DCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDF 814
D YD +GN IKN++KAA L+ G G++GF+L +GSSL E ++ ++ +N+EDF
Sbjct: 781 DSYDDNGNIKANLNEIIKNMIKAADLTSGKGKIGFVLASGSSLQEVVDITQKNLINLEDF 840
Query: 815 DAIVCNSGSELYFPWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVD 874
DAIVCNSGSE+Y+PWRDM+ D DYE HVEY+WPGE++RSV+ R+ E AEDDI +
Sbjct: 841 DAIVCNSGSEIYYPWRDMMVDADYETHVEYKWPGESIRSVILRLICTEPAAEDDITEYAS 900
Query: 875 ASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRY 934
+ S+RC + S+K G +TR+VD++RQRLRMRG RCN+VYT A +RLNV+P ASRIQALRY
Sbjct: 901 SCSTRCYAISVKQGVKTRRVDDLRQRLRMRGLRCNIVYTHAATRLNVIPLCASRIQALRY 960
Query: 935 LSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDV 994
LSIRWGID+SK V F+GEKGDTDYEDLL GLHKT+IL+G V SEKLL E+ FKRED
Sbjct: 961 LSIRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKGVVGSDSEKLLRSEENFKREDA 1020
Query: 995 VPPDSPNIAYIEESYEPQDLSAALKAIKIK 1024
VP +SPNI+Y++E+ Q++ + L+A IK
Sbjct: 1021 VPQESPNISYVKENGGSQEIMSTLEAYGIK 1050
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 4 |
| >sp|O04933|SPSA2_CRAPL Probable sucrose-phosphate synthase 2 OS=Craterostigma plantagineum GN=SPS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1218 bits (3151), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/1083 (57%), Positives = 779/1083 (71%), Gaps = 69/1083 (6%)
Query: 1 MAGNEWINGYLEAILDAGSGKTKMNDGKFKLSKFEETKQKEGQLFSPTKYFVEEVINSFD 60
MAGNEWINGYLEAILD G+ N G K + ++ + + F+PTKYFVEEV++ D
Sbjct: 1 MAGNEWINGYLEAILDTGASAIDENSGGGKTAAAQKGRHHDHH-FNPTKYFVEEVVSGVD 59
Query: 61 ESDLHRTWVKVIATRNTRERSNRLENMCWRIWHLARKKKQIAWEDAQRLAKRRLEREQGR 120
ESDLHRTW+KV+ATRNTRERS+RLENMCWRIWHL RKKKQ+ WED QRLA R+ EREQGR
Sbjct: 60 ESDLHRTWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEDLQRLAARKWEREQGR 119
Query: 121 NDAADDLSE-LSEGEKEKGDSINASESLKEIPRIN-------SDMQIWSEDDKSSRNLYI 172
D +D+SE LSEGEK GD + + + PR N S++++WS+ +K + LYI
Sbjct: 120 KDVTEDMSEDLSEGEK--GDVMGETPVALDSPRGNKKYHRNFSNLEVWSDSNKE-KKLYI 176
Query: 173 VLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSS 232
VLIS+HGLVRG+NME+GRDSDTGGQ+KYVVE+ARALA GVYRVDL TRQI+SPEVD S
Sbjct: 177 VLISLHGLVRGENMELGRDSDTGGQIKYVVEVARALAKMPGVYRVDLFTRQISSPEVDWS 236
Query: 233 YGEPNEMLSCPSDGTGSCG----------------AYIIRIPCGARDKYIAKESLWPYIH 276
Y EP EMLS S G AYIIRIP G RDKY+ KE LWP+I
Sbjct: 237 YAEPTEMLSSSSTTAGEAHEPEEEEEEEDLGEGSGAYIIRIPFGPRDKYLRKELLWPHIQ 296
Query: 277 EFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHS 336
EFVDGAL+HIVNM++A+G+Q+ GG+P WPYVIHGHYADAG+ AA LSGALNVPMVLTGHS
Sbjct: 297 EFVDGALSHIVNMSKALGDQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHS 356
Query: 337 LGRNKFEQLLKQGRLPK-DINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDG 395
LGRNK EQLLKQGR K DIN+ Y+IMRRIEAEEL LDA+E+V+TST+QEIE QWGLYDG
Sbjct: 357 LGRNKLEQLLKQGRQTKEDINSMYRIMRRIEAEELSLDAAELVITSTKQEIEEQWGLYDG 416
Query: 396 FDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFS-YVTTQDTMGGDTDLKSLIGNDR 454
FD+KLER LR R +RGV+C GRFMPRM VIPPGMDFS V +D GD DL +L
Sbjct: 417 FDVKLERVLRARARRGVNCHGRFMPRMAVIPPGMDFSNVVVPEDGSEGDGDLATLT---E 473
Query: 455 TQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLI 514
S R++P +W++VMRF TNPHKP ILALSRPDPKKN+TTL+KAFGEC+PLRELAN+TLI
Sbjct: 474 ATSPRSVPAIWADVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLTLI 533
Query: 515 LGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFI 574
+GNRDDI++MS ++ VLTTVLKLID+YDLYGQVA+PKHHKQSDVP+IYRLA+KTKGVFI
Sbjct: 534 MGNRDDIDEMSGGNASVLTTVLKLIDRYDLYGQVAFPKHHKQSDVPEIYRLASKTKGVFI 593
Query: 575 NPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLA 634
NPA +EPFGLT+IEAAA+GLP+VATKNGGPVDI +ALNNGLLVDPHDQ+AIA+ALLKL++
Sbjct: 594 NPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQDAIANALLKLVS 653
Query: 635 DKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNRHPNSHLEI---MTIPGEPLSDS 691
+KN+W+ECRKNGLKNIH FSWPEHCR YL+ V R RHP + T + L+DS
Sbjct: 654 EKNLWNECRKNGLKNIHLFSWPEHCRTYLTRVAACRMRHPQWKTDTPLDETAIDDSLNDS 713
Query: 692 LRDVEDFSLRFSMEGD-FKLN------------AEL-DAVTRQKNLIE-AITQKASFNGN 736
L+DV D SLR S++G+ +N AEL D V R N I+ + A
Sbjct: 714 LKDVLDMSLRLSVDGEKMSVNESSSVELPGGEAAELPDQVRRVLNKIKRQDSGPAQREAE 773
Query: 737 ASVTHSPG------RRQMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRV-GF 789
PG RR+ L VIA DCYD GN + +I+ +++A L + R GF
Sbjct: 774 GKAGDVPGKYPMLRRRRKLFVIALDCYDLKGNPDKKMILSIQEIVRAVRLDPQMSRFSGF 833
Query: 790 ILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWR------DMVADGDYEAHVE 843
L T + E + ++ V + DFDA++C+SGSE+Y+P + D DY +H+E
Sbjct: 834 ALSTAMPVAELADFLKAGDVKVNDFDALICSSGSEVYYPGTYGEESGKLYLDPDYTSHIE 893
Query: 844 YRWPGENVRSVVPRVAR-AEDG----AEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIR 898
YRW G+ ++ + ++ AEDG A I +S+S C SY+IK ++ +KVD++R
Sbjct: 894 YRWGGDGLKKTISKLMNTAEDGKSSVASSPIELVAKSSNSHCLSYAIKDPSKAKKVDDMR 953
Query: 899 QRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDY 958
Q+LRMRG RC+L+Y R + + VVP ASR QALRYL +RW + ++ M V +GE GDTDY
Sbjct: 954 QKLRMRGLRCHLMYCRNSTSMQVVPLLASRSQALRYLFVRWRLSVANMYVILGETGDTDY 1013
Query: 959 EDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAAL 1018
E+L+ G HKTLI+RG V GSE+LL ++ R+DV+P D+P IAY ++ + + +
Sbjct: 1014 EELISGTHKTLIMRGVVEKGSEELLRTAGSYLRDDVIPQDTPLIAYADKGAKAEHIVETF 1073
Query: 1019 KAI 1021
+ +
Sbjct: 1074 RQL 1076
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Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Craterostigma plantagineum (taxid: 4153) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|Q8RY24|SPSA3_ARATH Probable sucrose-phosphate synthase 3 OS=Arabidopsis thaliana GN=SPS3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1204 bits (3116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/1067 (57%), Positives = 773/1067 (72%), Gaps = 56/1067 (5%)
Query: 1 MAGNEWINGYLEAILDAGSGKTKMNDGKFKLSKFEETKQKEGQLFSPTKYFVEEVINSFD 60
MAGNEWINGYLEAILD+ + + K + S ++ +GQ F+PTKYFVEEV+ D
Sbjct: 1 MAGNEWINGYLEAILDSQAQGIEETQQKPQASV--NLREGDGQYFNPTKYFVEEVVTGVD 58
Query: 61 ESDLHRTWVKVIATRNTRERSNRLENMCWRIWHLARKKKQIAWEDAQRLAKRRLEREQGR 120
E+DLHRTW+KV+ATRN+RER++RLENMCWRIWHL RKKKQ+ WED+QR+A RRLEREQGR
Sbjct: 59 ETDLHRTWLKVVATRNSRERNSRLENMCWRIWHLTRKKKQLEWEDSQRIANRRLEREQGR 118
Query: 121 NDAADDLSE-LSEGEKEKG--DSINASESLKEIPRINSDMQIWSEDDKSSRNLYIVLISM 177
DA +DLSE LSEGEK G + + +++ R S+++IWS+D K +R LY+VLIS+
Sbjct: 119 RDATEDLSEDLSEGEKGDGLGEIVQPETPRRQLQRNLSNLEIWSDDKKENR-LYVVLISL 177
Query: 178 HGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPN 237
HGLVRG+NME+G DSDTGGQVKYVVELARALA GVYRVDL TRQI S EVD SY EP
Sbjct: 178 HGLVRGENMELGSDSDTGGQVKYVVELARALARMPGVYRVDLFTRQICSSEVDWSYAEPT 237
Query: 238 EMLS----CPSDGTG-SCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARA 292
EML+ C D TG S GAYIIRIP G RDKY+ KE LWP++ EFVDGAL HI+NM++
Sbjct: 238 EMLTTAEDCDGDETGESSGAYIIRIPFGPRDKYLNKEILWPFVQEFVDGALAHILNMSKV 297
Query: 293 IGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLP 352
+GEQ+ GKP WPYVIHGHYADAG+ AA LSGALNVPMVLTGHSLGRNK EQLLKQGR
Sbjct: 298 LGEQIGKGKPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQS 357
Query: 353 K-DINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRG 411
K DIN++YKI RRIEAEEL LDA+E+V+TSTRQEI+ QWGLYDGFD+KLE+ LR R +RG
Sbjct: 358 KEDINSTYKIKRRIEAEELSLDAAELVITSTRQEIDEQWGLYDGFDVKLEKVLRARARRG 417
Query: 412 VSCFGRFMPRMVVIPPGMDFSYVTTQ-DTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMR 470
V+C GRFMPRM VIPPGMDF+ V Q DT GD DL SL+G S + +P +WSEVMR
Sbjct: 418 VNCHGRFMPRMAVIPPGMDFTNVEVQEDTPEGDGDLASLVGGTEGSSPKAVPTIWSEVMR 477
Query: 471 FFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSV 530
FFTNPHKP ILALSRPDPKKN+TTLLKAFGEC+PLRELAN+TLI+GNRDDI+++S+ ++
Sbjct: 478 FFTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIDELSSGNAS 537
Query: 531 VLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAA 590
VLTTVLKLIDKYDLYG VAYPKHHKQSDVPDIYRLAA TKGVFINPALVEPFGLT+IEAA
Sbjct: 538 VLTTVLKLIDKYDLYGSVAYPKHHKQSDVPDIYRLAANTKGVFINPALVEPFGLTLIEAA 597
Query: 591 AYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNI 650
A+GLP+VATKNGGPVDI +AL+NGLLVDPHDQ AIA+ALLKL+++KN+W ECR NG KNI
Sbjct: 598 AHGLPMVATKNGGPVDIHRALHNGLLVDPHDQEAIANALLKLVSEKNLWHECRINGWKNI 657
Query: 651 HRFSWPEHCRNYLSHVEHSRNRHPNSHLEIMTIPGE----PLSDSLRDVEDFSLRFSMEG 706
H FSWPEHCR YL+ + R RHP + + + L+DSL+DV+D SLR SM+G
Sbjct: 658 HLFSWPEHCRTYLTRIAACRMRHPQWQTDADEVAAQDDEFSLNDSLKDVQDMSLRLSMDG 717
Query: 707 DF-KLNAELDAVTRQKNLIEAITQKASFNGNASVTHSPG------------------RRQ 747
D LN L + N + + Q S + P RR+
Sbjct: 718 DKPSLNGSL-----EPNSADPVKQIMSRMRTPEIKSKPELQGKKQSDNLGSKYPVLRRRE 772
Query: 748 MLIVIAADCYDSDGNTTE-TFQATIKNVMKAAGLSLGLGR-VGFILVTGSSLGETMEAIR 805
L+V+A DCYD++G E I+N++KA + + GF + T L E ++
Sbjct: 773 RLVVLAVDCYDNEGAPDEKAMVPMIQNIIKAVRSDPQMAKNSGFAISTSMPLDELTRFLK 832
Query: 806 RCTVNIEDFDAIVCNSGSELYFPWRD---MVADGDYEAHVEYRWPGENVRSVVPRV---- 858
+ + +FD ++C+SGSE+Y+P + ++ D DY +H++YRW E +++ V ++
Sbjct: 833 SAKIQVSEFDTLICSSGSEVYYPGGEEGKLLPDPDYSSHIDYRWGMEGLKNTVWKLMNTT 892
Query: 859 ---ARAEDGAEDDIVGFVDASS-SRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTR 914
A + ++ ASS S C +Y IK ++ +VD++RQ+LR+RG RC+ +Y R
Sbjct: 893 AVGGEARNKGSPSLIQEDQASSNSHCVAYMIKDRSKVMRVDDLRQKLRLRGLRCHPMYCR 952
Query: 915 AGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGS 974
+R+ +VP ASR QALRYL +RW ++++ M V VG++GDTDYE+L+ G HKT+I++G
Sbjct: 953 NSTRMQIVPLLASRSQALRYLFVRWRLNVANMYVVVGDRGDTDYEELISGTHKTVIVKGL 1012
Query: 975 VMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAI 1021
V GS+ LL D R+D+VP +SP I +++ ++++ K +
Sbjct: 1013 VTLGSDALLRSTDL--RDDIVPSESPFIGFLKVDSPVKEITDIFKQL 1057
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|P31927|SPSA_MAIZE Sucrose-phosphate synthase OS=Zea mays GN=SPS PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1195 bits (3091), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/1065 (56%), Positives = 759/1065 (71%), Gaps = 48/1065 (4%)
Query: 1 MAGNEWINGYLEAILDAGSGKTKMNDGKFKLSKFEETKQKEGQ----LFSPTKYFVEEVI 56
MAGNEWINGYLEAILD+ + G TK + F+P+ YFVEEV+
Sbjct: 1 MAGNEWINGYLEAILDSHTSSRGAGGGGGGGDPRSPTKAASPRGAHMNFNPSHYFVEEVV 60
Query: 57 NSFDESDLHRTWVKVIATRNTRERSNRLENMCWRIWHLARKKKQIAWEDAQRLAKRRLER 116
DESDLHRTW+KV+ATRN RERS RLENMCWRIWHLARKKKQ+ E QR++ RR E+
Sbjct: 61 KGVDESDLHRTWIKVVATRNARERSTRLENMCWRIWHLARKKKQLELEGIQRISARRKEQ 120
Query: 117 EQGRNDAADDLSE-LSEGEKEKGDSIN----ASESLKEIPRINSDMQIWSEDDKSSRNLY 171
EQ R +A +DL+E LSEGEK GD+I + K+ R SD+ +WS+D+K + LY
Sbjct: 121 EQVRREATEDLAEDLSEGEK--GDTIGELAPVETTKKKFQRNFSDLTVWSDDNKE-KKLY 177
Query: 172 IVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDS 231
IVLIS+HGLVRG+NME+GRDSDTGGQVKYVVELARA++ GVYRVDL TRQ++SP+VD
Sbjct: 178 IVLISVHGLVRGENMELGRDSDTGGQVKYVVELARAMSMMPGVYRVDLFTRQVSSPDVDW 237
Query: 232 SYGEPNEMLSCPS-DGTG---SCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIV 287
SYGEP EML S DG G S GAYI+RIPCG RDKY+ KE+LWPY+ EFVDGAL HI+
Sbjct: 238 SYGEPTEMLCAGSNDGEGMGESGGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHIL 297
Query: 288 NMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLK 347
NM++A+GEQV G+P PYVIHGHYADAG+VAA LSGALNVPMVLTGHSLGRNK EQLLK
Sbjct: 298 NMSKALGEQVGNGRPVLPYVIHGHYADAGDVAALLSGALNVPMVLTGHSLGRNKLEQLLK 357
Query: 348 QGRLPKD-INASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRV 406
QGR+ K+ I+++YKIMRRIE EEL LDASE+V+TSTRQEI+ QWGLYDGFD+KLE+ LR
Sbjct: 358 QGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEIDEQWGLYDGFDVKLEKVLRA 417
Query: 407 RRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWS 466
R +RGVSC GR+MPRMVVIPPGMDFS V + + GD D+K I S +++PP+W+
Sbjct: 418 RARRGVSCHGRYMPRMVVIPPGMDFSNVVVHEDIDGDGDVKDDIVGLEGASPKSMPPIWA 477
Query: 467 EVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSN 526
EVMRF TNPHKP ILALSRPDPKKN+TTL+KAFGEC+PLRELAN+TLI+GNRDDI+DMS
Sbjct: 478 EVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDDMSA 537
Query: 527 SSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTI 586
++ VLTTVLKLIDKYDLYG VA+PKHH Q+DVP+IYRLAAK KGVFINPALVEPFGLT+
Sbjct: 538 GNASVLTTVLKLIDKYDLYGSVAFPKHHNQADVPEIYRLAAKMKGVFINPALVEPFGLTL 597
Query: 587 IEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNG 646
IEAAA+GLP+VATKNGGPVDI ALNNGLLVDPHDQNAIADALLKL+ADKN+W ECR+NG
Sbjct: 598 IEAAAHGLPIVATKNGGPVDITNALNNGLLVDPHDQNAIADALLKLVADKNLWQECRRNG 657
Query: 647 LKNIHRFSWPEHCRNYLSHVEHSRNRHPNSHLEIMTIPG----EPLSDSLRDVEDFSLRF 702
L+NIH +SWPEHCR YL+ V R R+P + G E L DS+ D +D SLR
Sbjct: 658 LRNIHLYSWPEHCRTYLTRVAGCRLRNPRWLKDTPADAGADEEEFLEDSM-DAQDLSLRL 716
Query: 703 SMEGD-FKLNAE----LDAVTRQKNLIEAITQKASFNGNASVTHSPGRRQML-------- 749
S++G+ LN D + + ++ I Q ++ + S + G +
Sbjct: 717 SIDGEKSSLNTNDPLWFDPQDQVQKIMNNIKQSSALPPSMSSVAAEGTGSTMNKYPLLRR 776
Query: 750 ----IVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRV-GFILVTGSSLGETMEAI 804
VIA DCY DG ++ I+ V +A + ++ GF L T L ET++ +
Sbjct: 777 RRRLFVIAVDCYQDDGRASKKMLQVIQEVFRAVRSDSQMFKISGFTLSTAMPLSETLQLL 836
Query: 805 RRCTVNIEDFDAIVCNSGSELYFPWR--------DMVADGDYEAHVEYRWPGENVRSVVP 856
+ + DFDA++C SGSE+Y+P + D DY H+ +RW + R +
Sbjct: 837 QLGKIPATDFDALICGSGSEVYYPGTANCMDAEGKLRPDQDYLMHISHRWSHDGARQTIA 896
Query: 857 RVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAG 916
++ A+DG+ D + V +S++ C ++ IK + + VD +R+RLRMRG RC+++Y R
Sbjct: 897 KLMGAQDGSGDAVEQDVASSNAHCVAFLIKDPQKVKTVDEMRERLRMRGLRCHIMYCRNS 956
Query: 917 SRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVM 976
+RL VVP ASR QALRYLS+RWG+ + M + GE GDTD E++L GLHKT+I+RG
Sbjct: 957 TRLQVVPLLASRSQALRYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTE 1016
Query: 977 YGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAI 1021
GSE L+ ++KR+DVVP ++P AY + ++ ALK +
Sbjct: 1017 KGSEALVRSPGSYKRDDVVPSETPLAAYTTGELKADEIMRALKQV 1061
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Zea mays (taxid: 4577) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|Q0JGK4|SPSA1_ORYSJ Probable sucrose-phosphate synthase 1 OS=Oryza sativa subsp. japonica GN=SPS1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 1153 bits (2982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/1085 (55%), Positives = 753/1085 (69%), Gaps = 72/1085 (6%)
Query: 1 MAGNEWINGYLEAILDAGSGKTKMNDGKFKLSKFEETKQKEGQL---------------- 44
MAGNEWINGYLEAILD+G G G
Sbjct: 1 MAGNEWINGYLEAILDSGGAAGGGGGGGGGGGGGGGGGGGGGGGGVDPRSPAAGAASPRG 60
Query: 45 ----FSPTKYFVEEVINSFDESDLHRTWVKVIATRNTRERSNRLENMCWRIWHLARKKKQ 100
F+PT YFVEEV+ DESDLHRTW+KV+ATRN RERS RLENMCWRIWHLARKKKQ
Sbjct: 61 PHMNFNPTHYFVEEVVKGVDESDLHRTWIKVVATRNARERSTRLENMCWRIWHLARKKKQ 120
Query: 101 IAWEDAQRLAKRRLEREQGRNDAADDLSE-LSEGEKEKGDSINASESL---KEIPRINSD 156
+ E R++ RR E+EQ R + ++DL+E L EGEK A + K+ R S+
Sbjct: 121 LELEGILRISARRKEQEQVRRETSEDLAEDLFEGEKADTVGELAQQDTPMKKKFQRNFSE 180
Query: 157 MQIWSEDDKSSRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYR 216
+ + D+ + LYIVLIS+HGLVRGDNME+GRDSDTGGQVKYVVELARALA GVYR
Sbjct: 181 LTVSWSDENKEKKLYIVLISLHGLVRGDNMELGRDSDTGGQVKYVVELARALAMMPGVYR 240
Query: 217 VDLLTRQIASPEVDSSYGEPNEMLSCPS-DGTGS---CGAYIIRIPCGARDKYIAKESLW 272
VDL TRQ++SPEVD SYGEP EML+ S DG GS GAYI+RIPCG RDKY+ KE+LW
Sbjct: 241 VDLFTRQVSSPEVDWSYGEPTEMLTSGSTDGEGSGESAGAYIVRIPCGPRDKYLRKEALW 300
Query: 273 PYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVL 332
PY+ EFVDGAL HI+NM++A+GEQV+ GK PYVIHGHYADAG+VAA LSGALNVPMVL
Sbjct: 301 PYLQEFVDGALAHILNMSKALGEQVSNGKLVLPYVIHGHYADAGDVAALLSGALNVPMVL 360
Query: 333 TGHSLGRNKFEQLLKQGRLPKD-INASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWG 391
TGHSLGRNK EQ++KQGR+ K+ I+++YKIMRRIE EEL LDA+E+V+TSTRQEI+ QWG
Sbjct: 361 TGHSLGRNKLEQIMKQGRMSKEEIDSTYKIMRRIEGEELALDAAELVITSTRQEIDEQWG 420
Query: 392 LYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTT-QDTMGGDTDLKSLI 450
LYDGFD+KLE+ LR R +RGVSC GRFMPRMVVIPPGMDFS V +DT GD
Sbjct: 421 LYDGFDVKLEKVLRARARRGVSCHGRFMPRMVVIPPGMDFSSVVVPEDTSDGDD------ 474
Query: 451 GND-RTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELA 509
G D S R+LPP+W+EVMRF TNPHKP ILALSRPDPKKN+TTL+KAFGEC+PLRELA
Sbjct: 475 GKDFEIASPRSLPPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELA 534
Query: 510 NMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKT 569
N+ LI+GNRDDI++MS ++ VLTTVLKLIDKYDLYG VA+PKHHKQSDVP+IYRL K
Sbjct: 535 NLILIMGNRDDIDEMSAGNASVLTTVLKLIDKYDLYGSVAFPKHHKQSDVPEIYRLTGKM 594
Query: 570 KGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADAL 629
KGVFINPALVEPFGLT+IEAAA+GLP+VATKNGGPVDI ALNNGLLVDPHDQ+AIADAL
Sbjct: 595 KGVFINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDIKNALNNGLLVDPHDQHAIADAL 654
Query: 630 LKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNRHP----NSHLEIMTIPG 685
LKL+ADKN+W ECRKNGL+NI +SWPEHCR YL+ + R R+P ++ +
Sbjct: 655 LKLVADKNLWQECRKNGLRNIQLYSWPEHCRTYLTRIAGCRIRNPRWLMDTPADAAAEEE 714
Query: 686 EPLSDSLRDVEDFSLRFSMEG-------DFKLNAELDAVTRQKNLIE----AITQKASFN 734
E L DSL DV+D SLR S++G D + D+V R N I+ A T A
Sbjct: 715 EALEDSLMDVQDLSLRLSIDGERGSSMNDAPSSDPQDSVQRIMNKIKRSSPADTDGAKIP 774
Query: 735 GNASVTHSPG---------RRQMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLG 785
A+ T + G RR+ L VIA DCY DG+ ++ I+ V +A +
Sbjct: 775 AEAAATATSGAMNKYPLLRRRRRLFVIAVDCYGDDGSASKRMLQVIQEVFRAVRSDSQMS 834
Query: 786 RV-GFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADG-------- 836
R+ GF L T L ET++ ++ + DFDA++C SGSE+Y+P D
Sbjct: 835 RISGFALSTAMPLPETLKLLQLGKIPPTDFDALICGSGSEVYYPSTAQCVDAGGRLRPDQ 894
Query: 837 DYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDN 896
DY H+ +RW + + + ++ A DG+ ++ V++ + C S+ IK + R +D
Sbjct: 895 DYLLHINHRWSHDGAKQTIAKL--AHDGSGTNVEPDVESCNPHCVSFFIKDPNKVRTIDE 952
Query: 897 IRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDT 956
+R+R+RMRG RC+L+Y R +RL VVP ASR QALRYL +RWG+ + M + VGE GDT
Sbjct: 953 MRERVRMRGLRCHLMYCRNATRLQVVPLLASRSQALRYLFVRWGLSVGNMYLIVGEHGDT 1012
Query: 957 DYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSA 1016
D+E++L GLHKT+I+RG GSE+L+ +++REDVVP +SP IA+ + + ++
Sbjct: 1013 DHEEMLSGLHKTVIIRGVTEKGSEQLVRSSGSYQREDVVPSESPLIAFTKGDLKADEIMR 1072
Query: 1017 ALKAI 1021
ALK +
Sbjct: 1073 ALKEV 1077
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|A2WYE9|SPSA1_ORYSI Probable sucrose-phosphate synthase 1 OS=Oryza sativa subsp. indica GN=SPS1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 1153 bits (2982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/1085 (55%), Positives = 753/1085 (69%), Gaps = 72/1085 (6%)
Query: 1 MAGNEWINGYLEAILDAGSGKTKMNDGKFKLSKFEETKQKEGQL---------------- 44
MAGNEWINGYLEAILD+G G G
Sbjct: 1 MAGNEWINGYLEAILDSGGAAGGGGGGGGGGGGGGGGGGGGGGGGVDPRSPAAGAASPRG 60
Query: 45 ----FSPTKYFVEEVINSFDESDLHRTWVKVIATRNTRERSNRLENMCWRIWHLARKKKQ 100
F+PT YFVEEV+ DESDLHRTW+KV+ATRN RERS RLENMCWRIWHLARKKKQ
Sbjct: 61 PHMNFNPTHYFVEEVVKGVDESDLHRTWIKVVATRNARERSTRLENMCWRIWHLARKKKQ 120
Query: 101 IAWEDAQRLAKRRLEREQGRNDAADDLSE-LSEGEKEKGDSINASESL---KEIPRINSD 156
+ E R++ RR E+EQ R + ++DL+E L EGEK A + K+ R S+
Sbjct: 121 LELEGILRISARRKEQEQVRRETSEDLAEDLFEGEKADTVGELAQQDTPMKKKFQRNFSE 180
Query: 157 MQIWSEDDKSSRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYR 216
+ + D+ + LYIVLIS+HGLVRGDNME+GRDSDTGGQVKYVVELARALA GVYR
Sbjct: 181 LTVSWSDENKEKKLYIVLISLHGLVRGDNMELGRDSDTGGQVKYVVELARALAMMPGVYR 240
Query: 217 VDLLTRQIASPEVDSSYGEPNEMLSCPS-DGTGS---CGAYIIRIPCGARDKYIAKESLW 272
VDL TRQ++SPEVD SYGEP EML+ S DG GS GAYI+RIPCG RDKY+ KE+LW
Sbjct: 241 VDLFTRQVSSPEVDWSYGEPTEMLTSGSTDGEGSGESAGAYIVRIPCGPRDKYLRKEALW 300
Query: 273 PYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVL 332
PY+ EFVDGAL HI+NM++A+GEQV+ GK PYVIHGHYADAG+VAA LSGALNVPMVL
Sbjct: 301 PYLQEFVDGALAHILNMSKALGEQVSNGKLVLPYVIHGHYADAGDVAALLSGALNVPMVL 360
Query: 333 TGHSLGRNKFEQLLKQGRLPKD-INASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWG 391
TGHSLGRNK EQ++KQGR+ K+ I+++YKIMRRIE EEL LDA+E+V+TSTRQEI+ QWG
Sbjct: 361 TGHSLGRNKLEQIMKQGRMSKEEIDSTYKIMRRIEGEELALDAAELVITSTRQEIDEQWG 420
Query: 392 LYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTT-QDTMGGDTDLKSLI 450
LYDGFD+KLE+ LR R +RGVSC GRFMPRMVVIPPGMDFS V +DT GD
Sbjct: 421 LYDGFDVKLEKVLRARARRGVSCHGRFMPRMVVIPPGMDFSSVVVPEDTSDGDD------ 474
Query: 451 GND-RTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELA 509
G D S R+LPP+W+EVMRF TNPHKP ILALSRPDPKKN+TTL+KAFGEC+PLRELA
Sbjct: 475 GKDFEIASPRSLPPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELA 534
Query: 510 NMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKT 569
N+ LI+GNRDDI++MS ++ VLTTVLKLIDKYDLYG VA+PKHHKQSDVP+IYRL K
Sbjct: 535 NLILIMGNRDDIDEMSAGNASVLTTVLKLIDKYDLYGSVAFPKHHKQSDVPEIYRLTGKM 594
Query: 570 KGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADAL 629
KGVFINPALVEPFGLT+IEAAA+GLP+VATKNGGPVDI ALNNGLLVDPHDQ+AIADAL
Sbjct: 595 KGVFINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDIKNALNNGLLVDPHDQHAIADAL 654
Query: 630 LKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNRHP----NSHLEIMTIPG 685
LKL+ADKN+W ECRKNGL+NI +SWPEHCR YL+ + R R+P ++ +
Sbjct: 655 LKLVADKNLWQECRKNGLRNIQLYSWPEHCRTYLTRIAGCRIRNPRWLMDTPADAAAEEE 714
Query: 686 EPLSDSLRDVEDFSLRFSMEG-------DFKLNAELDAVTRQKNLIE----AITQKASFN 734
E L DSL DV+D SLR S++G D + D+V R N I+ A T A
Sbjct: 715 EALEDSLMDVQDLSLRLSIDGERGSSMNDAPSSDPQDSVQRIMNKIKRSSPADTDGAKIP 774
Query: 735 GNASVTHSPG---------RRQMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLG 785
A+ T + G RR+ L VIA DCY DG+ ++ I+ V +A +
Sbjct: 775 AEAAATATSGAMNKYPLLRRRRRLFVIAVDCYGDDGSASKRMLQVIQEVFRAVRSDSQMS 834
Query: 786 RV-GFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADG-------- 836
R+ GF L T L ET++ ++ + DFDA++C SGSE+Y+P D
Sbjct: 835 RISGFALSTAMPLPETLKLLQLGKIPPTDFDALICGSGSEVYYPSTAQCVDAGGRLRPDQ 894
Query: 837 DYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDN 896
DY H+ +RW + + + ++ A DG+ ++ V++ + C S+ IK + R +D
Sbjct: 895 DYLLHINHRWSHDGAKQTIAKL--AHDGSGTNVEPDVESCNPHCVSFFIKDPNKVRTIDE 952
Query: 897 IRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDT 956
+R+R+RMRG RC+L+Y R +RL VVP ASR QALRYL +RWG+ + M + VGE GDT
Sbjct: 953 MRERVRMRGLRCHLMYCRNATRLQVVPLLASRSQALRYLFVRWGLSVGNMYLIVGEHGDT 1012
Query: 957 DYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSA 1016
D+E++L GLHKT+I+RG GSE+L+ +++REDVVP +SP IA+ + + ++
Sbjct: 1013 DHEEMLSGLHKTVIIRGVTEKGSEQLVRSSGSYQREDVVPSESPLIAFTKGDLKADEIMR 1072
Query: 1017 ALKAI 1021
ALK +
Sbjct: 1073 ALKEV 1077
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Oryza sativa subsp. indica (taxid: 39946) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|O22060|SPSA1_CITUN Probable sucrose-phosphate synthase 1 OS=Citrus unshiu GN=SPS1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1119 bits (2895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/1079 (55%), Positives = 756/1079 (70%), Gaps = 81/1079 (7%)
Query: 1 MAGNEWINGYLEAILDAGSGKTKMNDGKFKLSKFEETKQKEGQLFSPTKYFVEEVINSFD 60
MAGN+WIN YLEAILD G G ++D K L E + FSPT+YFVEEVI FD
Sbjct: 1 MAGNDWINSYLEAILDVGPG---LDDAKSSLLLRERGR------FSPTRYFVEEVITGFD 51
Query: 61 ESDLHRTWVKVIATRNTRERSNRLENMCWRIWHLARKKKQIAWEDAQRLAKRRLEREQGR 120
E+DLHR+WVK ATR+ +ER+ RLENMCWRIW+LAR+KKQ+ E AQR+AKRRLERE+GR
Sbjct: 52 ETDLHRSWVKAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGR 111
Query: 121 NDAADDLSE-LSEGEKEKGD-----SINASESLKEIPRINS--DMQIWSEDDKSSRNLYI 172
+A D+SE LSEGEK GD S + + +PRI+S M+ W K + LYI
Sbjct: 112 REATADMSEDLSEGEK--GDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKG-KKLYI 168
Query: 173 VLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSS 232
VLIS+HGL+RG+NME+GRDSDTGGQVKYVVELARAL + GVYRVDLLTRQ+++P+VD S
Sbjct: 169 VLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWS 228
Query: 233 YGEPNEMLSCPS------DGTGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHI 286
YGEP EML+ + D S GAYIIRIP G +DKYIAKE LWP+I EFVDGALNHI
Sbjct: 229 YGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHI 288
Query: 287 VNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLL 346
+ M+ +GEQ+ GGKP WP IHGHYADAG+ AA LSGALNVPM+ TGHSLGR+K EQLL
Sbjct: 289 IRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLL 348
Query: 347 KQGRLPKD-INASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLR 405
KQ RL +D INA+YKIMRRIEAEEL LDASE+V+TSTRQEIE QW LYDGFD LERKLR
Sbjct: 349 KQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLR 408
Query: 406 VRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQD-TMGGDTDLKSLIGNDRTQSKRNLPPM 464
R +R VSC+G+FMPRM +IPPGM+F ++ QD M G+T+ GN+ + + PP+
Sbjct: 409 ARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETE-----GNEDNPASPD-PPI 462
Query: 465 WSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDM 524
WSE+MRFFTNP KP ILAL+RPDPKKN+TTL+KAFGEC+PLRELAN+TLI+GNRD I++M
Sbjct: 463 WSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEM 522
Query: 525 SNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGL 584
S++S+ VL +VLKLIDKYDLYGQVAYPKHHKQSDVP+IYRLAAKTKGVFINPA +EPFGL
Sbjct: 523 SSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGL 582
Query: 585 TIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRK 644
T+IEAAA+GLP+VATKNGGPVDI + L+NGLLVDPHDQ +IADALLKL+A K +W+ CR+
Sbjct: 583 TLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVAGKQLWARCRQ 642
Query: 645 NGLKNIHRFSWPEHCRNYLSHVEHSRNRHPNSHLEI---MTIPGEPLSDSLRDVEDFS-- 699
NGLKNIH FSWPEHC+ YLS + + RHP T + DSLRD++D S
Sbjct: 643 NGLKNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRTDDGGETSESDSPGDSLRDIQDISLN 702
Query: 700 LRFSMEG--------DFKLNAELDAVTRQKNLIEAI----------------TQKASFNG 735
L+FS++G D L++E + R+ L A+ T K N
Sbjct: 703 LKFSLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNT 762
Query: 736 NASVTHSPGRRQMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGS 795
A+ + RR+ + VI+ DC +TT AT K + +A G +GFIL T
Sbjct: 763 GAAKFPALRRRKHIFVISVDC----DSTTGLLDAT-KKICEAVEKERTEGSIGFILSTSM 817
Query: 796 SLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRD-----MVADGDYEAHVEYRWPGEN 850
++ E + ++ DFDA +CNSGS+LY+ + V D Y +H+EYRW GE
Sbjct: 818 TISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEG 877
Query: 851 VRSVVPRVA------RAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMR 904
+R + R A +AE G E + S++ C ++S++ T V +R+ LR++
Sbjct: 878 LRKTLVRWASQVTDKKAESG-EKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQ 936
Query: 905 GFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVG 964
RC+++Y + GSR+NV+P ASR QALRYL +RWG++LSKMVVFVGE GDTDYE LL G
Sbjct: 937 ALRCHVIYCQNGSRVNVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGG 996
Query: 965 LHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAIKI 1023
+HKT+IL+G + S +H ++ DV+P DSPNI E D+ ++L+ + +
Sbjct: 997 VHKTVILKG-ICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGL 1054
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Citrus unshiu (taxid: 55188) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|P31928|SPSA_SPIOL Sucrose-phosphate synthase OS=Spinacia oleracea GN=SPS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1108 bits (2865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 578/1062 (54%), Positives = 739/1062 (69%), Gaps = 56/1062 (5%)
Query: 1 MAGNEWINGYLEAILDAGSGKTKMNDGKFKLSKFEETKQKEGQLFSPTKYFVEEVINSFD 60
MAGN+WIN YLEAILD G + GK + ++ G FSP++YFVEEVI+ FD
Sbjct: 1 MAGNDWINSYLEAILDVGGQGIDASTGKTSTAPPSLLLRERGH-FSPSRYFVEEVISGFD 59
Query: 61 ESDLHRTWVKVIATRNTRERSNRLENMCWRIWHLARKKKQIAWEDAQRLAKRRLEREQGR 120
E+DLHR+WV+ +TR+ +ER+ RLEN+CWRIW+LARKKKQI E+AQRLAKR +ERE+GR
Sbjct: 60 ETDLHRSWVRAASTRSPQERNTRLENLCWRIWNLARKKKQIEGEEAQRLAKRHVERERGR 119
Query: 121 NDAADDLSE-LSEGEK--EKGDSINASESLK-EIPRINSD--MQIWSEDDKSSRNLYIVL 174
+A D+SE LSEGE+ D + ASES K + RI+S M W+ K + LY+VL
Sbjct: 120 REATADMSEDLSEGERGDTVADMLFASESTKGRMRRISSVEMMDNWANTFKE-KKLYVVL 178
Query: 175 ISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYG 234
IS+HGL+RG+NME+GRDSDTGGQVKYVVELARAL + GVYRVDLLTRQ+++P VD SYG
Sbjct: 179 ISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPGVDWSYG 238
Query: 235 EPNEMLSCPSDGTG------SCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVN 288
EP EMLS + S GAYIIRIP G +DKY+AKE LWPYI EFVDGAL+HI
Sbjct: 239 EPTEMLSSRNSENSTEQLGESSGAYIIRIPFGPKDKYVAKELLWPYIPEFVDGALSHIKQ 298
Query: 289 MARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQ 348
M++ +GEQ+ GG P WP +HGHYADAG+ AA LSGALNVPMV TGHSLGR+K +QLLKQ
Sbjct: 299 MSKVLGEQIGGGLPVWPASVHGHYADAGDSAALLSGALNVPMVFTGHSLGRDKLDQLLKQ 358
Query: 349 GRLPKD-INASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVR 407
GRL ++ ++A+YKIMRRIEAEEL LDASE+V+TSTRQEIE QW LY GFDL LERKLR R
Sbjct: 359 GRLSREEVDATYKIMRRIEAEELCLDASEIVITSTRQEIEEQWQLYHGFDLVLERKLRAR 418
Query: 408 RQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSE 467
+RGVSC GRFMPRM IPPGM+F+++ +D D+ + I + + P +WSE
Sbjct: 419 MRRGVSCHGRFMPRMAKIPPGMEFNHIAPEDA-----DMDTDIDGHKESNANPDPVIWSE 473
Query: 468 VMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNS 527
+MRFF+N KP ILAL+RPDPKKN+TTL+KAFGEC+PLRELAN+TLI+GNRDDI++MS +
Sbjct: 474 IMRFFSNGRKPMILALARPDPKKNLTTLVKAFGECRPLRELANLTLIIGNRDDIDEMSTT 533
Query: 528 SSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTII 587
SS VL ++LKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPA +EPFGLT+I
Sbjct: 534 SSSVLISILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLI 593
Query: 588 EAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGL 647
EAAAYGLP+VATKNGGPVDI+ L+NGLL+DPHDQ +IADALLKL+ADK++W++CR+NGL
Sbjct: 594 EAAAYGLPIVATKNGGPVDIIGVLDNGLLIDPHDQKSIADALLKLVADKHLWTKCRQNGL 653
Query: 648 KNIHRFSWPEHCRNYLSHVEHSRNRHPN-SHLEIMTIPGEPLS--DSLRDVEDFSLRFSM 704
KNIH FSWPEHC+NYLS + + R PN ++ + + S DSLRD++D SL +
Sbjct: 654 KNIHLFSWPEHCKNYLSRIASCKPRQPNWQRIDEGSENSDTDSAGDSLRDIQDISLNLKL 713
Query: 705 -------EGDFKLNAELDA--VTRQKNLIEAITQKASFNGNASV----THSPG--RRQML 749
EG + LD+ ++ + A+ + + A V P RR+ +
Sbjct: 714 SLDAERTEGGNSFDDSLDSEEANAKRKIENAVAKLSKSMDKAQVDVGNLKFPAIRRRKCI 773
Query: 750 IVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809
VIA DC + T IK V+ G G +GFIL T +L E + +
Sbjct: 774 FVIALDC-----DVTSDLLQVIKTVISIVGEQRPTGSIGFILSTSMTLSEVDSLLDSGGL 828
Query: 810 NIEDFDAIVCNSGSELYFPWRD-----MVADGDYEAHVEYRWPGENVRSVVPRVA----- 859
DFDA +CNSGSELY+P D V D DY +H++YRW GE + + + A
Sbjct: 829 RPADFDAFICNSGSELYYPSTDYSESPFVLDQDYYSHIDYRWGGEGLWKTLVKWAASVNE 888
Query: 860 RAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRL 919
+ + A + ++ +S++ C ++ + +R+ +R++ RC+ +Y + G+RL
Sbjct: 889 KKGENAPNIVIADETSSTTHCYAFKVNDFTLAPPAKELRKMMRIQALRCHAIYCQNGTRL 948
Query: 920 NVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGS 979
NV+P ASR QALRYL +RWG++LS VVFVGE GDTDYE LL G+HKT+IL+G + +
Sbjct: 949 NVIPVLASRSQALRYLFMRWGVELSNFVVFVGESGDTDYEGLLGGVHKTVILKG--IGSN 1006
Query: 980 EKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAI 1021
H A+ E V+P DSPN+ + D+S AL I
Sbjct: 1007 TSNFHATRAYPMEHVMPVDSPNM-FQTGGCNIDDISDALSKI 1047
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Spinacia oleracea (taxid: 3562) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|P49031|SPSA_BETVU Probable sucrose-phosphate synthase OS=Beta vulgaris GN=SPS PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1095 bits (2833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/1065 (54%), Positives = 746/1065 (70%), Gaps = 67/1065 (6%)
Query: 1 MAGNEWINGYLEAILDAGSGKTKMNDGKFKLSKFEETKQKEGQLFSPTKYFVEEVINSFD 60
MAGN+WIN YLEAILD G G ++D K L E + FSPT+YFVEEVI FD
Sbjct: 1 MAGNDWINSYLEAILDVGPG---LDDAKSSLLLRERGR------FSPTRYFVEEVITGFD 51
Query: 61 ESDLHRTWVKVIATRNTRERSNRLENMCWRIWHLARKKKQIAWEDAQRLAKRRLEREQGR 120
E+DLHR+WV+ ATR+ +ER+ RLENMCWRIW+LAR+KKQ+ E+AQR KRR+E E+GR
Sbjct: 52 ETDLHRSWVRAQATRSPQERNTRLENMCWRIWNLARQKKQLENEEAQRKTKRRMELERGR 111
Query: 121 NDAADDLSE-LSEGEKEKGDSINASESLKEIPRINS--DMQIWSEDDKSSRNLYIVLISM 177
+A D+SE LSEGEK+ S + + +PRINS M+ W K + LY+VLIS+
Sbjct: 112 REATADMSEDLSEGEKDI--SAHGDSTRPRLPRINSLDAMETWISQQKE-KKLYLVLISL 168
Query: 178 HGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPN 237
HGL+RG+NME+GRDSDTGGQVKYVVELARAL + GVYRVDLLTRQ++SP+VD SYGEP
Sbjct: 169 HGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPT 228
Query: 238 EMLSCPSDGTG----------SCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIV 287
EML+ P D G S GAYI+RIP G RDKYIAKE LWPYI EFVDGALNHIV
Sbjct: 229 EMLN-PRDSNGFDDDDDEMGESSGAYIVRIPFGPRDKYIAKEELWPYIPEFVDGALNHIV 287
Query: 288 NMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLK 347
M++ +GEQ+ G+ WP IHGHYADAG+ AA LSG LNVPM+LTGHSLGR+K EQLLK
Sbjct: 288 QMSKVLGEQIGSGETVWPVAIHGHYADAGDSAALLSGGLNVPMLLTGHSLGRDKLEQLLK 347
Query: 348 QGRLPKD-INASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRV 406
QGR+ KD IN +YKIMRRIEAEEL LDASE+V+TSTRQEIE QW LYDGFD LERKLR
Sbjct: 348 QGRMSKDDINNTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWHLYDGFDPVLERKLRA 407
Query: 407 RRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWS 466
R +RGVSC+GRFMPRMVVIPPGM+F+++ + GD D ++ + S PP+W+
Sbjct: 408 RMKRGVSCYGRFMPRMVVIPPGMEFNHIVPHE---GDMDGETEETEEHPTSPD--PPIWA 462
Query: 467 EVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSN 526
E+MRFF+ P KP ILAL+RPDPKKN+TTL+KAFGEC+PLRELAN+TLI+GNRD I++MS+
Sbjct: 463 EIMRFFSKPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSS 522
Query: 527 SSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTI 586
+SS VL +VLKLID+YDLYGQVAYPKHHKQ+DVP+IYRLAAKTKGVFINPA +EPFGLT+
Sbjct: 523 TSSSVLLSVLKLIDQYDLYGQVAYPKHHKQADVPEIYRLAAKTKGVFINPAFIEPFGLTL 582
Query: 587 IEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNG 646
IEAAA+GLP+VATKNGGPVDI + L+NGLLVDPH+Q +IA ALLKL+ADK +W++C++NG
Sbjct: 583 IEAAAHGLPMVATKNGGPVDIQRVLDNGLLVDPHEQQSIATALLKLVADKQLWTKCQQNG 642
Query: 647 LKNIHRFSWPEHCRNYLSHVEHSRNRHP----NSHLEIMTIPGEPLSDSLRDVEDFSLRF 702
LKNIH +SWPEH + YLS + SR R P +S + E SDSLRD++D SL
Sbjct: 643 LKNIHLYSWPEHSKTYLSRIASSRQRQPQWQRSSDEGLDNQEPESPSDSLRDIKDISLNL 702
Query: 703 SM----EGDFKLNAELDAVTRQ---------KNLIEAITQKASFN---GNASVTHSPGRR 746
+ E K L +T+ N + + +KA F+ AS + RR
Sbjct: 703 EVLVRPEKRVKTLKILGLMTKANSRMLLCSWSNGVHKMLRKARFSDKVDQASSKYPAFRR 762
Query: 747 QMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRR 806
+ LI + A DG+ + ++ + AAG G +GFIL T S+ E +
Sbjct: 763 RKLIYVIA----VDGDYEDGLFDIVRRIFDAAGKEKIEGSIGFILSTSYSMPEIQNYLLS 818
Query: 807 CTVNIEDFDAIVCNSGSELYFPW-----RDMVADGDYEAHVEYRWPGENVRSVVPRVARA 861
N+ DFDA +CNSGSELY+ +++AD DY +H+EYRW GE +R + R A +
Sbjct: 819 KGFNLHDFDAYICNSGSELYYSSLNSEESNIIADSDYHSHIEYRWGGEGLRRTLLRWAAS 878
Query: 862 --EDGAEDD---IVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAG 916
E E++ I + S+ C ++ IK + +R+ +R++ RC+++Y + G
Sbjct: 879 ITEKNGENEEQVITEDEEVSTGYCFAFKIKNQNKVPPTKELRKSMRIQALRCHVIYCQNG 938
Query: 917 SRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVM 976
S++NV+P ASR QALRYL +RWG++LSKMVVFVGE GDTDYE LL G+HKT+IL+G V
Sbjct: 939 SKMNVIPVLASRSQALRYLYVRWGVELSKMVVFVGECGDTDYEGLLGGVHKTVILKG-VS 997
Query: 977 YGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAI 1021
+ + LH ++ VV DSPNI + + ++ + + +
Sbjct: 998 NTALRSLHANRSYPLSHVVSLDSPNIGEVSKGCSSSEIQSIVTKL 1042
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Beta vulgaris (taxid: 161934) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|Q94BT0|SPSA1_ARATH Sucrose-phosphate synthase 1 OS=Arabidopsis thaliana GN=SPS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1095 bits (2831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 589/1067 (55%), Positives = 760/1067 (71%), Gaps = 70/1067 (6%)
Query: 1 MAGNEWINGYLEAILDAGSGKTKMNDGKFKLSKFEETKQKEGQLFSPTKYFVEEVINSFD 60
MAGN+W+N YLEAILD G G ++D + S +E F+P++YFVEEVI +D
Sbjct: 1 MAGNDWVNSYLEAILDVGQG---LDDARSSPSLL----LRERGRFTPSRYFVEEVITGYD 53
Query: 61 ESDLHRTWVKVIATRNTRERSNRLENMCWRIWHLARKKKQIAWEDAQRLAKRRLEREQGR 120
E+DLHR+WVK +ATR+ +ER+ RLENMCWRIW+LAR+KKQ ++AQRLAKRRLERE+GR
Sbjct: 54 ETDLHRSWVKAVATRSPQERNTRLENMCWRIWNLARQKKQHEEKEAQRLAKRRLEREKGR 113
Query: 121 NDAADDLSE-LSEGEKEKGDSIN----ASESLK-EIPRINS--DMQIWSEDDKSSRNLYI 172
+A D+SE SEGEK GD I+ ES K +PRINS M++W+ K ++ LY+
Sbjct: 114 REATADMSEEFSEGEK--GDIISDISTHGESTKPRLPRINSAESMELWASQQKGNK-LYL 170
Query: 173 VLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSS 232
VLIS+HGL+RG+NME+GRDSDTGGQVKYVVELARAL + GVYRVDLLTRQ++SP+VD S
Sbjct: 171 VLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDYS 230
Query: 233 YGEPNEMLSCP-----SDGTG-SCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHI 286
YGEP EML+ SD G S GAYI+RIP G +DKYI KE LWP+I EFVDGA++HI
Sbjct: 231 YGEPTEMLTPRDSEDFSDEMGESSGAYIVRIPFGPKDKYIPKELLWPHIPEFVDGAMSHI 290
Query: 287 VNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLL 346
+ M+ +GEQV GKP WP IHGHYADAG+ A LSGALNVPM+LTGHSLGR+K EQLL
Sbjct: 291 MQMSNVLGEQVGVGKPIWPSAIHGHYADAGDATALLSGALNVPMLLTGHSLGRDKLEQLL 350
Query: 347 KQGRLPKD-INASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLR 405
+QGRL K+ IN++YKIMRRIE EEL LD SEMV+TSTRQEI+ QW LYDGFD LERKLR
Sbjct: 351 RQGRLSKEEINSTYKIMRRIEGEELSLDVSEMVITSTRQEIDEQWRLYDGFDPILERKLR 410
Query: 406 VRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMW 465
R +R VSC+GRFMPRMV IPPGM+F+++ DTD GN+ + + PP+W
Sbjct: 411 ARIKRNVSCYGRFMPRMVKIPPGMEFNHIVPHGGDMEDTD-----GNEEHPTSPD-PPIW 464
Query: 466 SEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMS 525
+E+MRFF+N KP ILAL+RPDPKKN+TTL+KAFGEC+PLRELAN+ LI+GNRD I++MS
Sbjct: 465 AEIMRFFSNSRKPMILALARPDPKKNITTLVKAFGECRPLRELANLALIMGNRDGIDEMS 524
Query: 526 NSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLT 585
++SS VL +VLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK+KGVFINPA++EPFGLT
Sbjct: 525 STSSSVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKSKGVFINPAIIEPFGLT 584
Query: 586 IIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKN 645
+IEAAA+GLP+VATKNGGPVDI + L+NGLLVDPHDQ +I++ALLKL+ADK++W++CR+N
Sbjct: 585 LIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQQSISEALLKLVADKHLWAKCRQN 644
Query: 646 GLKNIHRFSWPEHCRNYLSHVEHSRNRHPNSHLEIMTIPGEP--LSDSLRDVEDFS--LR 701
GLKNIH+FSWPEHC+ YLS + + RHP + EP SDSLRD++D S L+
Sbjct: 645 GLKNIHQFSWPEHCKTYLSRITSFKPRHPQWQSDDGGDNSEPESPSDSLRDIQDISLNLK 704
Query: 702 FSMEG---DFKLNAELDAVTRQKNLIEAITQKASFNGNASVTHS-----------PG--R 745
FS +G D +N E ++ R K+ IEA Q S ++ S P R
Sbjct: 705 FSFDGSGNDNYMNQEGSSMDR-KSKIEAAVQNWSKGKDSRKMGSLERSEVNSGKFPAVRR 763
Query: 746 RQMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIR 805
R+ ++VIA D +D + +T E K ++ A G VGFIL T ++ E +
Sbjct: 764 RKFIVVIALD-FDGEEDTLE----ATKRILDAVEKERAEGSVGFILSTSLTISEVQSFLV 818
Query: 806 RCTVNIEDFDAIVCNSGSELYFPWRD-----MVADGDYEAHVEYRWPGENVRSVVPRVAR 860
+N DFDA +CNSGS+L++ + V D Y +H+EYRW GE +R + R A
Sbjct: 819 SGGLNPNDFDAFICNSGSDLHYTSLNNEDGPFVVDFYYHSHIEYRWGGEGLRKTLIRWAS 878
Query: 861 A--EDGAEDD--IVGFVD-ASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRA 915
+ E A++D IV + S+ C ++++K A V +R+ LR++ RC++VY++
Sbjct: 879 SLNEKKADNDEQIVTLAEHLSTDYCYTFTVKKPAAVPPVRELRKLLRIQALRCHVVYSQN 938
Query: 916 GSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSV 975
G+R+NV+P ASRIQALRYL +RWGID++KM VFVGE GDTDYE LL GLHK+++L+G
Sbjct: 939 GTRINVIPVLASRIQALRYLFVRWGIDMAKMAVFVGESGDTDYEGLLGGLHKSVVLKG-- 996
Query: 976 MYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAIK 1022
LH ++ DV+ +S N+ + + +D L+ +K
Sbjct: 997 -VSCSACLHANRSYPLTDVISFESNNVVHASPDSDVRDALKKLELLK 1042
|
Plays a major role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1024 | ||||||
| 255561468 | 1021 | sucrose phosphate syntase, putative [Ric | 0.996 | 0.999 | 0.823 | 0.0 | |
| 224124392 | 1020 | predicted protein [Populus trichocarpa] | 0.994 | 0.998 | 0.806 | 0.0 | |
| 225459996 | 1043 | PREDICTED: probable sucrose-phosphate sy | 0.995 | 0.976 | 0.784 | 0.0 | |
| 297734791 | 1018 | unnamed protein product [Vitis vinifera] | 0.989 | 0.995 | 0.792 | 0.0 | |
| 449441778 | 1029 | PREDICTED: probable sucrose-phosphate sy | 0.996 | 0.991 | 0.752 | 0.0 | |
| 345296473 | 1029 | sucrose-phosphate synthase [Cucumis sati | 0.996 | 0.991 | 0.750 | 0.0 | |
| 356515414 | 1037 | PREDICTED: probable sucrose-phosphate sy | 0.998 | 0.985 | 0.753 | 0.0 | |
| 42566384 | 1050 | sucrose-phosphate synthase [Arabidopsis | 1.0 | 0.975 | 0.72 | 0.0 | |
| 51970018 | 1050 | sucrose-phosphate synthase - like protei | 1.0 | 0.975 | 0.719 | 0.0 | |
| 297809217 | 1051 | ATSPS4F [Arabidopsis lyrata subsp. lyrat | 1.0 | 0.974 | 0.721 | 0.0 |
| >gi|255561468|ref|XP_002521744.1| sucrose phosphate syntase, putative [Ricinus communis] gi|223538957|gb|EEF40554.1| sucrose phosphate syntase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1751 bits (4536), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 844/1025 (82%), Positives = 930/1025 (90%), Gaps = 5/1025 (0%)
Query: 1 MAGNEWINGYLEAILDAGSGKTKMNDGKFKLSKFEETKQKEGQLFSPTKYFVEEVINSFD 60
MAGN+WINGYLEAILD G+ K NDGK K++K+EE+K+KE + FSPT+YFVEEVINSFD
Sbjct: 1 MAGNDWINGYLEAILDVGNSLRKRNDGKLKIAKYEESKEKEDKSFSPTRYFVEEVINSFD 60
Query: 61 ESDLHRTWVKVIATRNTRERSNRLENMCWRIWHLARKKKQIAWEDAQRLAKRRLEREQGR 120
ESDLHRTWVKVIATRNTRERSNRLENMCWRIWHLARKKK+I W+DAQRLAKRRLEREQGR
Sbjct: 61 ESDLHRTWVKVIATRNTRERSNRLENMCWRIWHLARKKKKIEWDDAQRLAKRRLEREQGR 120
Query: 121 NDAADDLSELSEGEKEKGDSINASESLKEIPRINSDMQIWSEDDKSSRNLYIVLISMHGL 180
NDAA+DLSELSEGEKEKGD+ N SE++K+I RINSDMQIWS+D+K R LYIVLISMHGL
Sbjct: 121 NDAAEDLSELSEGEKEKGDA-NISEAVKDISRINSDMQIWSDDEKP-RRLYIVLISMHGL 178
Query: 181 VRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEML 240
VRG+NME+GRDSDTGGQVKYVVELA+ALANT+GV+RVDLLTRQI SPEVD SYGEP EML
Sbjct: 179 VRGENMELGRDSDTGGQVKYVVELAQALANTKGVFRVDLLTRQITSPEVDCSYGEPIEML 238
Query: 241 SCPSDGTGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGG 300
SCP DG+GSCGAYI+RIPCG RD+YI KESLWPYI EFVDGAL HIVNMARA+GEQVNGG
Sbjct: 239 SCPPDGSGSCGAYIVRIPCGPRDRYIPKESLWPYIPEFVDGALGHIVNMARALGEQVNGG 298
Query: 301 KPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPK-DINASY 359
KPTWPYV+HGHYADAGEVA+HLSGALNVPMVLTGHSLGRNKFEQL+KQGRL + DIN +Y
Sbjct: 299 KPTWPYVVHGHYADAGEVASHLSGALNVPMVLTGHSLGRNKFEQLVKQGRLSREDINTTY 358
Query: 360 KIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFM 419
KI+RRIEAEELGLD +EMVVTST+QEIE QWGLYDGFDLKLERKLRVRR+RGVSC GR M
Sbjct: 359 KILRRIEAEELGLDTAEMVVTSTKQEIEEQWGLYDGFDLKLERKLRVRRRRGVSCLGRNM 418
Query: 420 PRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPT 479
PRMVVIPPGMDFSYVT QD++ GD LKSLIG+DRTQ KRNLPP+WSEVMRFFTNPHKPT
Sbjct: 419 PRMVVIPPGMDFSYVTAQDSLEGD--LKSLIGSDRTQKKRNLPPIWSEVMRFFTNPHKPT 476
Query: 480 ILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLI 539
ILALSRPDPKKNVTTLLKAFGEC LRELAN+TLILGNRDDIE+MSNSSSVVLTTVLKLI
Sbjct: 477 ILALSRPDPKKNVTTLLKAFGECHRLRELANLTLILGNRDDIEEMSNSSSVVLTTVLKLI 536
Query: 540 DKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVAT 599
DKYDLYGQVAYPKHHKQS+VP+IYRLAAKTKGVFINPALVEPFGLT+IEAAAYGLPVVAT
Sbjct: 537 DKYDLYGQVAYPKHHKQSEVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAYGLPVVAT 596
Query: 600 KNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHC 659
KNGGPVDILKALNNGLLVDPHDQ AI DALLKL+ADKN+WSECRKNGLKNIHRFSW EHC
Sbjct: 597 KNGGPVDILKALNNGLLVDPHDQKAIEDALLKLVADKNLWSECRKNGLKNIHRFSWTEHC 656
Query: 660 RNYLSHVEHSRNRHPNSHLEIMTIPGEPLSDSLRDVEDFSLRFSMEGDFKLNAELDAVTR 719
NYLSH+EH RNRH + EI IP EP+SDSL+DVED SL+FS+EGD KLN E DA TR
Sbjct: 657 CNYLSHIEHCRNRHSTTRFEITPIPEEPMSDSLKDVEDLSLKFSIEGDLKLNGESDAATR 716
Query: 720 QKNLIEAITQKASFNGNASVTHSPGRRQMLIVIAADCYDSDGNTTETFQATIKNVMKAAG 779
QK LIEAITQ ASFNGN +VT+SPGRRQML VIAADCYD +G + ETFQ IKNVMKAAG
Sbjct: 717 QKKLIEAITQAASFNGNTTVTYSPGRRQMLFVIAADCYDCNGKSMETFQEIIKNVMKAAG 776
Query: 780 LSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYE 839
L LGLGR+GFIL+TGSSL ETMEA+RRC VNIEDFDAI+CNSGSE+Y+PWRDMVAD DYE
Sbjct: 777 LCLGLGRIGFILLTGSSLQETMEALRRCPVNIEDFDAIICNSGSEMYYPWRDMVADVDYE 836
Query: 840 AHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQ 899
AHVEYRWPGENVR + R+A+ EDGAEDD+ A SRC SY IKPGA+TRKVD++RQ
Sbjct: 837 AHVEYRWPGENVRKMAIRLAKVEDGAEDDLYENNQACGSRCYSYIIKPGAKTRKVDDLRQ 896
Query: 900 RLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYE 959
RLRMRGFRCNLVYTRA SRLNV+P FASR QALRYLS+RWGIDLSK+VVFVGE+GDTDYE
Sbjct: 897 RLRMRGFRCNLVYTRAASRLNVIPLFASRKQALRYLSVRWGIDLSKVVVFVGERGDTDYE 956
Query: 960 DLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALK 1019
+LL GLHKTLI+RGSV YGSEK L G+D+FK ED+VP SPN+ ++EE+ E QD+SAAL+
Sbjct: 957 ELLAGLHKTLIIRGSVGYGSEKFLRGDDSFKTEDIVPHGSPNLGFVEETCEVQDISAALE 1016
Query: 1020 AIKIK 1024
+ IK
Sbjct: 1017 CLGIK 1021
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224124392|ref|XP_002319320.1| predicted protein [Populus trichocarpa] gi|222857696|gb|EEE95243.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1706 bits (4417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 827/1026 (80%), Positives = 917/1026 (89%), Gaps = 8/1026 (0%)
Query: 1 MAGNEWINGYLEAILDAGSG-KTKMNDGKFKLSKFEETKQKEGQLFSPTKYFVEEVINSF 59
MA NEWINGYLEAILD GSG K +DG+ K++KF++ K E +LFSP KYFVEEVINSF
Sbjct: 1 MARNEWINGYLEAILDVGSGVMKKRSDGRLKIAKFQQVK--EDKLFSPIKYFVEEVINSF 58
Query: 60 DESDLHRTWVKVIATRNTRERSNRLENMCWRIWHLARKKKQIAWEDAQRLAKRRLEREQG 119
DESDLHRTWVK+IATRNTRERSNRLENMCWRIWHLARKKKQIAW+DAQRLAKRRLEREQG
Sbjct: 59 DESDLHRTWVKMIATRNTRERSNRLENMCWRIWHLARKKKQIAWDDAQRLAKRRLEREQG 118
Query: 120 RNDAADDLSELSEGEKEKGDSINASESLKEIPRINSDMQIWSEDDKSSRNLYIVLISMHG 179
RNDAADDLSELSEGEKEKG++ N SES+++I RINSDM++WS+DDK R LYIVLISMHG
Sbjct: 119 RNDAADDLSELSEGEKEKGEA-NLSESVRDIARINSDMKLWSDDDKP-RQLYIVLISMHG 176
Query: 180 LVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEM 239
LVRG+NME+GRDSDTGGQVKYVVELARALANT+GVYRVDLLTRQI SPEVD SYGEP EM
Sbjct: 177 LVRGENMELGRDSDTGGQVKYVVELARALANTKGVYRVDLLTRQITSPEVDFSYGEPIEM 236
Query: 240 LSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNG 299
LSCPSD +GSCGAYIIRIPCG +D+YI KESLWP+I EFVDGALNHIVNMARA+GEQVNG
Sbjct: 237 LSCPSDDSGSCGAYIIRIPCGPQDRYIPKESLWPWIPEFVDGALNHIVNMARALGEQVNG 296
Query: 300 GKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKD-INAS 358
GKPTWPYVIHGHYADAGEVAA LSGALNVPMVLTGHSLGRNKFEQLLKQGR K+ INA+
Sbjct: 297 GKPTWPYVIHGHYADAGEVAALLSGALNVPMVLTGHSLGRNKFEQLLKQGRHSKEHINAT 356
Query: 359 YKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRF 418
YKIMRRIEAEELGLDA+EMVVTSTRQEIE QWGLYDGFD+K+ERKLRVRR+RGVSC GR+
Sbjct: 357 YKIMRRIEAEELGLDAAEMVVTSTRQEIEEQWGLYDGFDIKVERKLRVRRRRGVSCLGRY 416
Query: 419 MPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKP 478
MPRMVVIPPGMDFSYVT D++ GD LKSLI +DR Q+KR+LPP+WSE+MRFFTNPHKP
Sbjct: 417 MPRMVVIPPGMDFSYVTADDSLEGD--LKSLIDSDRNQNKRSLPPIWSEIMRFFTNPHKP 474
Query: 479 TILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKL 538
TILALSRPDPKKNVTTLL+AFGECQPLRELAN+TLILGNRDDI +MS+SSS VLT VLKL
Sbjct: 475 TILALSRPDPKKNVTTLLQAFGECQPLRELANLTLILGNRDDIGEMSDSSSSVLTNVLKL 534
Query: 539 IDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVA 598
IDKYDLYGQVAYPKHHKQS+VPDIYRLAAKTKGVFINPALVEPFGLT+IEAAAYGLPVVA
Sbjct: 535 IDKYDLYGQVAYPKHHKQSEVPDIYRLAAKTKGVFINPALVEPFGLTLIEAAAYGLPVVA 594
Query: 599 TKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEH 658
TKNGGPVDI K L+NGLLVDPHDQ AIADALLKL+ADKN+W+ECRKNGLKNIH FSWPEH
Sbjct: 595 TKNGGPVDISKVLHNGLLVDPHDQKAIADALLKLVADKNLWTECRKNGLKNIHSFSWPEH 654
Query: 659 CRNYLSHVEHSRNRHPNSHLEIMTIPGEPLSDSLRDVEDFSLRFSMEGDFKLNAELDAVT 718
CRNYLSH+E RNRHP + LEI +P EP+S+SL+D+ED SLRFS+EGD+KLN ELDA
Sbjct: 655 CRNYLSHIEQCRNRHPTTRLEITPLPEEPMSESLKDMEDLSLRFSIEGDYKLNGELDATN 714
Query: 719 RQKNLIEAITQKASFNGNASVTHSPGRRQMLIVIAADCYDSDGNTTETFQATIKNVMKAA 778
+QK LIEAITQ A NG ASVT++PGRRQML VIA DCY +G +TETFQ IKNVMKA
Sbjct: 715 KQKKLIEAITQMAPSNGKASVTYTPGRRQMLFVIATDCYSFNGQSTETFQEIIKNVMKAG 774
Query: 779 GLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDY 838
G SLG+ R+GF+L T SSL E MEA+R C V IEDFDAI+CNSG +Y+PWRDMV D DY
Sbjct: 775 GQSLGMDRIGFVLATSSSLQEIMEALRCCEVKIEDFDAIICNSGGNMYYPWRDMVVDVDY 834
Query: 839 EAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIR 898
EAHV+YRWPGENVRS+V R+ARAEDGAEDDI ++ ASSSRC SYSIKPG +TRKV +R
Sbjct: 835 EAHVDYRWPGENVRSMVMRLARAEDGAEDDIKEYIKASSSRCFSYSIKPGVKTRKVYELR 894
Query: 899 QRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDY 958
QRLRMRG RCN+VYT A SRLNV P FASR QALRYLS+RWGIDLSKMVVFVG +GDTDY
Sbjct: 895 QRLRMRGLRCNIVYTHAASRLNVTPIFASRTQALRYLSVRWGIDLSKMVVFVGGRGDTDY 954
Query: 959 EDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAAL 1018
EDLL GLHKT+I+RG V YGSEKLLH ++FKREDVVP +S NI+++EE YE D+SAAL
Sbjct: 955 EDLLAGLHKTIIIRGLVEYGSEKLLHSAESFKREDVVPQESSNISFVEEKYEAADISAAL 1014
Query: 1019 KAIKIK 1024
A+ IK
Sbjct: 1015 VAMGIK 1020
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225459996|ref|XP_002270813.1| PREDICTED: probable sucrose-phosphate synthase 4 [Vitis vinifera] gi|58825798|gb|AAW82754.1| sucrose-phosphate synthase 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1670 bits (4326), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 822/1048 (78%), Positives = 922/1048 (87%), Gaps = 29/1048 (2%)
Query: 1 MAGNEWINGYLEAILDAGS----------GKTKMN------------DGKFKLSKFEETK 38
MAGNEWINGYLEAILDAGS G K N +GK ++ + EE +
Sbjct: 1 MAGNEWINGYLEAILDAGSSRNGLRVVEDGDEKSNSKNNGSRRRRFVEGKVRIGRLEEKE 60
Query: 39 QKEGQLFSPTKYFVEEVINSFDESDLHRTWVKVIATRNTRERSNRLENMCWRIWHLARKK 98
+++ ++F+PTKYFVEEV+NSFDESDLHRTW+KVIATRN+R+RSNRLENMCWRIWHLARKK
Sbjct: 61 KEKEEVFNPTKYFVEEVVNSFDESDLHRTWIKVIATRNSRDRSNRLENMCWRIWHLARKK 120
Query: 99 KQIAWEDAQRLAKRRLEREQGRNDAADDLSELSEGEKEKGDSINASESLKE-IPRINSDM 157
KQIAW+DAQRL KRRLEREQGR+DAADDLSELSEGEKEKGD N E +KE + RINSDM
Sbjct: 121 KQIAWDDAQRLTKRRLEREQGRHDAADDLSELSEGEKEKGDP-NQIEPVKEQMTRINSDM 179
Query: 158 QIWSEDDKSSRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRV 217
IWS+DDKS R+LYI+LIS+HGLVRG+NME+GRDSDTGGQVKYVVELARALANT+GVYRV
Sbjct: 180 HIWSDDDKS-RHLYIILISIHGLVRGENMELGRDSDTGGQVKYVVELARALANTKGVYRV 238
Query: 218 DLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWPYIHE 277
DLLTRQI S EVDSSYGEP EMLSCPSDG GSCGAYIIRIPCG RD+YI KESLWPYI E
Sbjct: 239 DLLTRQITSTEVDSSYGEPIEMLSCPSDGGGSCGAYIIRIPCGPRDRYIPKESLWPYIPE 298
Query: 278 FVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSL 337
FVDGAL HIVNMARA+GEQV+ GKP WPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSL
Sbjct: 299 FVDGALGHIVNMARALGEQVDAGKPIWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSL 358
Query: 338 GRNKFEQLLKQGRLPK-DINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGF 396
GRNKFEQLLKQGRL + DIN++YKIMRRIEAEELGLDA+EMVVTSTRQEIE QWGLYDGF
Sbjct: 359 GRNKFEQLLKQGRLSREDINSTYKIMRRIEAEELGLDAAEMVVTSTRQEIEEQWGLYDGF 418
Query: 397 DLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQ 456
DLKLERKLRVRR+RGVSCFGR MPRMVVIPPGMDFSYV QD+ G D+DLKSLIG+D+TQ
Sbjct: 419 DLKLERKLRVRRRRGVSCFGRNMPRMVVIPPGMDFSYVKIQDSEG-DSDLKSLIGSDKTQ 477
Query: 457 SKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILG 516
+KR+LPP+WSE+MRFFTNPHKP ILALSRPDPKKNVTTLLKAFGEC+ LRELAN+TLILG
Sbjct: 478 NKRHLPPIWSEIMRFFTNPHKPMILALSRPDPKKNVTTLLKAFGECRQLRELANLTLILG 537
Query: 517 NRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINP 576
NRDDIE+MSNSSSVVLTT LK IDKYDLYGQVAYPKHHKQS+VP+IYRLAAKTKGVFINP
Sbjct: 538 NRDDIEEMSNSSSVVLTTALKFIDKYDLYGQVAYPKHHKQSEVPEIYRLAAKTKGVFINP 597
Query: 577 ALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADK 636
ALVEPFGLT+IEAAAYGLPVVATKNGGPVDI+KALNNGLLVDPHDQ IADALLKLLADK
Sbjct: 598 ALVEPFGLTLIEAAAYGLPVVATKNGGPVDIIKALNNGLLVDPHDQKGIADALLKLLADK 657
Query: 637 NMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNRHPNSHLEIMTIPGEPLSDSLRDVE 696
N+W ECRKNGLKNIHRFSWPEHCRNYLSHVEH RNRHPN+HL I+ EP+SDSLRD+E
Sbjct: 658 NLWLECRKNGLKNIHRFSWPEHCRNYLSHVEHCRNRHPNTHLGIIPSIEEPMSDSLRDLE 717
Query: 697 DFSLRFSMEGDFKLNAELDAVTRQKNLIEAITQKASFNGNASVTHSPGRRQMLIVIAADC 756
D SL+FS++GDFKLN ELDA TRQK LIEA+T+ AS NGN+SV++ GRRQ L VIAADC
Sbjct: 718 DLSLKFSVDGDFKLNGELDAATRQKELIEALTRMASSNGNSSVSYHSGRRQGLFVIAADC 777
Query: 757 YDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDA 816
YDS+G+ TE A IKNVMK+ S GL +GF+L+TG SL E +E +R C VN+E+ DA
Sbjct: 778 YDSNGDCTERLPAIIKNVMKST--SSGLNLIGFVLLTGLSLQEILEKLRCCQVNLEEIDA 835
Query: 817 IVCNSGSELYFPWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDAS 876
+VCNSGSE+Y+PWRD++AD +YEAHVEYRWPGENVRSVV R+A+ E GAEDDIV +
Sbjct: 836 LVCNSGSEIYYPWRDLIADLEYEAHVEYRWPGENVRSVVTRLAQGEGGAEDDIVEYAGVC 895
Query: 877 SSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLS 936
S+RC SY +KPGA+TR++D++ QR+RMRGFRCNLVYT A SRLNVVP FASR QALRYLS
Sbjct: 896 STRCYSYGVKPGAKTRRIDDLHQRMRMRGFRCNLVYTHATSRLNVVPLFASRAQALRYLS 955
Query: 937 IRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVP 996
+RWGIDLSKMVVFVGEKGDTDYEDLLVGLHKT+ILRG V YGSEKLL E++FKRED++P
Sbjct: 956 VRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTIILRGLVEYGSEKLLRNEESFKREDMIP 1015
Query: 997 PDSPNIAYIEESYEPQDLSAALKAIKIK 1024
DSPNIA++EE YE ++SAAL + IK
Sbjct: 1016 QDSPNIAFVEEGYEALNISAALLTLGIK 1043
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297734791|emb|CBI17025.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1660 bits (4300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 815/1029 (79%), Positives = 908/1029 (88%), Gaps = 16/1029 (1%)
Query: 1 MAGNEWINGYLEAILDAGSGKTKM---NDGKFKLSKFEETKQKEGQLFSPTKYFVEEVIN 57
MAGNEWINGYLEAILDAGS + + DG E++ K YFVEEV+N
Sbjct: 1 MAGNEWINGYLEAILDAGSSRNGLRVVEDGD------EKSNSKNNGSRRRRFYFVEEVVN 54
Query: 58 SFDESDLHRTWVKVIATRNTRERSNRLENMCWRIWHLARKKKQIAWEDAQRLAKRRLERE 117
SFDESDLHRTW+KVIATRN+R+RSNRLENMCWRIWHLARKKKQIAW+DAQRL KRRLERE
Sbjct: 55 SFDESDLHRTWIKVIATRNSRDRSNRLENMCWRIWHLARKKKQIAWDDAQRLTKRRLERE 114
Query: 118 QGRNDAADDLSELSEGEKEKGDSINASESLKE-IPRINSDMQIWSEDDKSSRNLYIVLIS 176
QGR+DAADDLSELSEGEKEKGD N E +KE + RINSDM IWS+DDKS R+LYI+LIS
Sbjct: 115 QGRHDAADDLSELSEGEKEKGDP-NQIEPVKEQMTRINSDMHIWSDDDKS-RHLYIILIS 172
Query: 177 MHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEP 236
+HGLVRG+NME+GRDSDTGGQVKYVVELARALANT+GVYRVDLLTRQI S EVDSSYGEP
Sbjct: 173 IHGLVRGENMELGRDSDTGGQVKYVVELARALANTKGVYRVDLLTRQITSTEVDSSYGEP 232
Query: 237 NEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQ 296
EMLSCPSDG GSCGAYIIRIPCG RD+YI KESLWPYI EFVDGAL HIVNMARA+GEQ
Sbjct: 233 IEMLSCPSDGGGSCGAYIIRIPCGPRDRYIPKESLWPYIPEFVDGALGHIVNMARALGEQ 292
Query: 297 VNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPK-DI 355
V+ GKP WPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRL + DI
Sbjct: 293 VDAGKPIWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLSREDI 352
Query: 356 NASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCF 415
N++YKIMRRIEAEELGLDA+EMVVTSTRQEIE QWGLYDGFDLKLERKLRVRR+RGVSCF
Sbjct: 353 NSTYKIMRRIEAEELGLDAAEMVVTSTRQEIEEQWGLYDGFDLKLERKLRVRRRRGVSCF 412
Query: 416 GRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNP 475
GR MPRMVVIPPGMDFSYV QD+ G D+DLKSLIG+D+TQ+KR+LPP+WSE+MRFFTNP
Sbjct: 413 GRNMPRMVVIPPGMDFSYVKIQDSEG-DSDLKSLIGSDKTQNKRHLPPIWSEIMRFFTNP 471
Query: 476 HKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTV 535
HKP ILALSRPDPKKNVTTLLKAFGEC+ LRELAN+TLILGNRDDIE+MSNSSSVVLTT
Sbjct: 472 HKPMILALSRPDPKKNVTTLLKAFGECRQLRELANLTLILGNRDDIEEMSNSSSVVLTTA 531
Query: 536 LKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLP 595
LK IDKYDLYGQVAYPKHHKQS+VP+IYRLAAKTKGVFINPALVEPFGLT+IEAAAYGLP
Sbjct: 532 LKFIDKYDLYGQVAYPKHHKQSEVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAYGLP 591
Query: 596 VVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSW 655
VVATKNGGPVDI+KALNNGLLVDPHDQ IADALLKLLADKN+W ECRKNGLKNIHRFSW
Sbjct: 592 VVATKNGGPVDIIKALNNGLLVDPHDQKGIADALLKLLADKNLWLECRKNGLKNIHRFSW 651
Query: 656 PEHCRNYLSHVEHSRNRHPNSHLEIMTIPGEPLSDSLRDVEDFSLRFSMEGDFKLNAELD 715
PEHCRNYLSHVEH RNRHPN+HL I+ EP+SDSLRD+ED SL+FS++GDFKLN ELD
Sbjct: 652 PEHCRNYLSHVEHCRNRHPNTHLGIIPSIEEPMSDSLRDLEDLSLKFSVDGDFKLNGELD 711
Query: 716 AVTRQKNLIEAITQKASFNGNASVTHSPGRRQMLIVIAADCYDSDGNTTETFQATIKNVM 775
A TRQK LIEA+T+ AS NGN+SV++ GRRQ L VIAADCYDS+G+ TE A IKNVM
Sbjct: 712 AATRQKELIEALTRMASSNGNSSVSYHSGRRQGLFVIAADCYDSNGDCTERLPAIIKNVM 771
Query: 776 KAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVAD 835
K+ S GL +GF+L+TG SL E +E +R C VN+E+ DA+VCNSGSE+Y+PWRD++AD
Sbjct: 772 KST--SSGLNLIGFVLLTGLSLQEILEKLRCCQVNLEEIDALVCNSGSEIYYPWRDLIAD 829
Query: 836 GDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVD 895
+YEAHVEYRWPGENVRSVV R+A+ E GAEDDIV + S+RC SY +KPGA+TR++D
Sbjct: 830 LEYEAHVEYRWPGENVRSVVTRLAQGEGGAEDDIVEYAGVCSTRCYSYGVKPGAKTRRID 889
Query: 896 NIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGD 955
++ QR+RMRGFRCNLVYT A SRLNVVP FASR QALRYLS+RWGIDLSKMVVFVGEKGD
Sbjct: 890 DLHQRMRMRGFRCNLVYTHATSRLNVVPLFASRAQALRYLSVRWGIDLSKMVVFVGEKGD 949
Query: 956 TDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLS 1015
TDYEDLLVGLHKT+ILRG V YGSEKLL E++FKRED++P DSPNIA++EE YE ++S
Sbjct: 950 TDYEDLLVGLHKTIILRGLVEYGSEKLLRNEESFKREDMIPQDSPNIAFVEEGYEALNIS 1009
Query: 1016 AALKAIKIK 1024
AAL + IK
Sbjct: 1010 AALLTLGIK 1018
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449441778|ref|XP_004138659.1| PREDICTED: probable sucrose-phosphate synthase 4-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1613 bits (4176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 774/1028 (75%), Positives = 889/1028 (86%), Gaps = 8/1028 (0%)
Query: 2 AGNEWINGYLEAILDAGSG-KTKMNDGKFKLSKFEETKQKEGQLFSPTKYFVEEVINSFD 60
GNEW++GYLEAILD GS ++K GK ++++F++ KQK+G+LF PTKYFVEEV+ SFD
Sbjct: 3 GGNEWLHGYLEAILDVGSNNRSKKQGGKHRIARFDQDKQKKGKLFCPTKYFVEEVVYSFD 62
Query: 61 ESDLHRTWVKVIATRNTRERSNRLENMCWRIWHLARKKKQIAWEDAQRLAKRRLEREQGR 120
ESDL++TW KVIATRNTR+R+NRLENMCWRIWHLARKKK+IAW D Q+L RRLEREQGR
Sbjct: 63 ESDLYKTWTKVIATRNTRDRNNRLENMCWRIWHLARKKKRIAWNDEQKLTTRRLEREQGR 122
Query: 121 NDAADDLSELSEGEKEKGDSINASESLKEIPRINSDMQIWSEDDKSSRNLYIVLISMHGL 180
+DA+DDLS SEGEKE+GD+ N SES+K+ P NSD+Q+WS+D+KS RNLYIVLIS+HGL
Sbjct: 123 SDASDDLSGSSEGEKEQGDT-NISESIKDSPNTNSDIQVWSDDEKS-RNLYIVLISIHGL 180
Query: 181 VRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEML 240
VRG+NME+GRDSDTGGQVKYVVELARALANT+GV+RVDLLTRQI+SPEVD SYGEP EML
Sbjct: 181 VRGENMELGRDSDTGGQVKYVVELARALANTKGVHRVDLLTRQISSPEVDYSYGEPVEML 240
Query: 241 SCPSDGTGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGG 300
SCPSDGTGSCGAYIIRIPCG DKYI KESLWPYI EFVDGALNHI NMARA+GEQV GG
Sbjct: 241 SCPSDGTGSCGAYIIRIPCGPCDKYIPKESLWPYIPEFVDGALNHIANMARALGEQVAGG 300
Query: 301 KPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPK-DINASY 359
P WPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRL + DINA+Y
Sbjct: 301 NPIWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLSREDINATY 360
Query: 360 KIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFM 419
I+RRIEAEELGLDA+EMVVTSTRQEIE QWGLYDGFDLKLERKLRVRRQRGVSC GR+M
Sbjct: 361 NILRRIEAEELGLDAAEMVVTSTRQEIEEQWGLYDGFDLKLERKLRVRRQRGVSCLGRYM 420
Query: 420 PRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPT 479
PRMVVIPPGMDFS VT QD+ GD DLKSLIG+DR QS RN+PP+W+E+MRF TNPHKP
Sbjct: 421 PRMVVIPPGMDFSNVTIQDSTEGDGDLKSLIGSDRAQSNRNIPPIWNEIMRFLTNPHKPM 480
Query: 480 ILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLI 539
ILALSRPDPKKNVTTLLKAFGECQ LRELAN+ LILGNRDDIE+MS +SS VL TVLKL+
Sbjct: 481 ILALSRPDPKKNVTTLLKAFGECQALRELANLVLILGNRDDIEEMSTNSSSVLITVLKLL 540
Query: 540 DKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVAT 599
DKYDLYGQVAYPKHHKQS+V IY LAAKTKGVFINPALVEPFGLT+IEAAAYGLPVVAT
Sbjct: 541 DKYDLYGQVAYPKHHKQSEVHQIYCLAAKTKGVFINPALVEPFGLTLIEAAAYGLPVVAT 600
Query: 600 KNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHC 659
KNGGPVDILKAL+NGLLVDPHDQ AIADALLKL+ADKN+W ECRKN LKNIHRFSW EHC
Sbjct: 601 KNGGPVDILKALHNGLLVDPHDQKAIADALLKLVADKNLWIECRKNSLKNIHRFSWTEHC 660
Query: 660 RNYLSHVEHSRNRHPNSHLEIMTIPGEPLSDSLRDVEDFSLRFSMEGDFKLNAELDAVTR 719
+NYLSH+E+ RNRH + EI+ IP EP+SDSL+D+ED SLRF++EG+FK N ELD R
Sbjct: 661 KNYLSHIEYCRNRHSTTRHEIVPIPEEPMSDSLKDLEDLSLRFTIEGEFKFNGELDDAMR 720
Query: 720 QKNLIEAITQK-ASFNGNASVTHSPGRRQMLIVIAADCYDSDGNTTETFQATIKNVMKAA 778
QK L+EAIT++ S N N S +H PGRRQ L VIA DCY+++G T++ ++TIKNVM+
Sbjct: 721 QKELVEAITKRMVSSNNNDSASHYPGRRQGLFVIATDCYNNNGEYTKSLRSTIKNVMQ-T 779
Query: 779 GLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDY 838
G +LGLG +G++L+TGSSL ETMEA++ C V+ E+FDA+VCNSGSELY+PWRD AD DY
Sbjct: 780 GSTLGLGSIGYVLLTGSSLRETMEALKWCQVSPEEFDALVCNSGSELYYPWRDTSADTDY 839
Query: 839 EAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIR 898
E+H+EYRWPGENVRS V R+A+ E G EDDI V SSRC SYS+K A RK +++
Sbjct: 840 ESHIEYRWPGENVRSTVTRLAKLEGGNEDDITEHVGLWSSRCCSYSVKSIANIRKTEDLH 899
Query: 899 QRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDY 958
QRLRMRGFRCN+VY RA SRLNV+P +ASR QALRYLSI+WGIDLSKMVVFVG+KGDTD+
Sbjct: 900 QRLRMRGFRCNIVYVRAASRLNVLPLYASRRQALRYLSIKWGIDLSKMVVFVGDKGDTDH 959
Query: 959 EDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDV--VPPDSPNIAYIEESYEPQDLSA 1016
EDLL GLHKT++L+GSV GSEKLLH E++F +E + + DSPNI+ +E SY DL A
Sbjct: 960 EDLLAGLHKTIVLKGSVENGSEKLLHSENSFNKEGIATLSRDSPNISILEGSYGVHDLLA 1019
Query: 1017 ALKAIKIK 1024
AL +IK
Sbjct: 1020 ALNVAEIK 1027
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|345296473|gb|AEN84000.1| sucrose-phosphate synthase [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1607 bits (4160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 772/1028 (75%), Positives = 886/1028 (86%), Gaps = 8/1028 (0%)
Query: 2 AGNEWINGYLEAILDAGSG-KTKMNDGKFKLSKFEETKQKEGQLFSPTKYFVEEVINSFD 60
GNEW++GYLEAILD GS ++K GK ++++F++ KQK+G+LF PTKYFVEEV+ SFD
Sbjct: 3 GGNEWLHGYLEAILDVGSNNRSKKQGGKHRIARFDQDKQKKGKLFCPTKYFVEEVVYSFD 62
Query: 61 ESDLHRTWVKVIATRNTRERSNRLENMCWRIWHLARKKKQIAWEDAQRLAKRRLEREQGR 120
ESDL++TW KVIATRNTR+R+NRLENMCWRIWHLARKKK+IAW D Q+L RRLEREQGR
Sbjct: 63 ESDLYKTWTKVIATRNTRDRNNRLENMCWRIWHLARKKKRIAWNDEQKLTTRRLEREQGR 122
Query: 121 NDAADDLSELSEGEKEKGDSINASESLKEIPRINSDMQIWSEDDKSSRNLYIVLISMHGL 180
+DA+DDLS SEGEKE+GD+ N SES+K+ P NSD+Q+WS+D+KS RNLYIVLIS+HGL
Sbjct: 123 SDASDDLSGSSEGEKEQGDT-NISESIKDSPNTNSDIQVWSDDEKS-RNLYIVLISIHGL 180
Query: 181 VRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEML 240
VRG+NME+GRDSDTGGQVKYVVELARALANT+GV+RVDLLTRQI+SPEVD SYGEP EML
Sbjct: 181 VRGENMELGRDSDTGGQVKYVVELARALANTKGVHRVDLLTRQISSPEVDYSYGEPVEML 240
Query: 241 SCPSDGTGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGG 300
SCPSDGTGSCGAYIIRIPCG DKYI KESLWPYI EFVDGALNHI NMARA+GEQV GG
Sbjct: 241 SCPSDGTGSCGAYIIRIPCGPCDKYIPKESLWPYIPEFVDGALNHIANMARALGEQVAGG 300
Query: 301 KPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPK-DINASY 359
P WPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRL + DINA+Y
Sbjct: 301 NPIWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLSREDINATY 360
Query: 360 KIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFM 419
I+RRIEAEELGLDA+EMVVTSTRQEIE QWGLYDGFDLKLERKLRVRRQRGVSC GR+M
Sbjct: 361 NILRRIEAEELGLDAAEMVVTSTRQEIEEQWGLYDGFDLKLERKLRVRRQRGVSCLGRYM 420
Query: 420 PRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPT 479
PRMVVIPPGMDFS VT QD+ GD DLKSLIG+DR QS RN+PP+W+E+MRF TNPHKP
Sbjct: 421 PRMVVIPPGMDFSNVTIQDSTEGDGDLKSLIGSDRAQSNRNIPPIWNEIMRFLTNPHKPM 480
Query: 480 ILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLI 539
ILALSRPDPKKNVTTLLKAFGECQ LRELAN+ LILGNRDDIE+MS +SS VL TVLKL+
Sbjct: 481 ILALSRPDPKKNVTTLLKAFGECQALRELANLVLILGNRDDIEEMSTNSSSVLITVLKLL 540
Query: 540 DKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVAT 599
DKYDLYGQVAYPKHHKQS+V IY LAAKTKGVFINPALVEPFGLT+IEAAAYGLPVVAT
Sbjct: 541 DKYDLYGQVAYPKHHKQSEVRQIYCLAAKTKGVFINPALVEPFGLTLIEAAAYGLPVVAT 600
Query: 600 KNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHC 659
KNGGPVDILKAL+NGLLVDPHDQ AIADALLKL+ADKN+W ECRKN LKNIHRFSW EHC
Sbjct: 601 KNGGPVDILKALHNGLLVDPHDQKAIADALLKLVADKNLWIECRKNSLKNIHRFSWTEHC 660
Query: 660 RNYLSHVEHSRNRHPNSHLEIMTIPGEPLSDSLRDVEDFSLRFSMEGDFKLNAELDAVTR 719
+NYLSH+E+ RNRH + EI+ IP EP+SDSL+D+ED SLRF++EG+FK N ELD R
Sbjct: 661 KNYLSHIEYCRNRHSTTRHEIVPIPEEPMSDSLKDLEDLSLRFTIEGEFKFNGELDDAMR 720
Query: 720 QKNLIEAITQK-ASFNGNASVTHSPGRRQMLIVIAADCYDSDGNTTETFQATIKNVMKAA 778
QK L+EAIT++ S N N S +H PGRRQ L VIA DCY+++G T++ ++TIKNVM+
Sbjct: 721 QKELVEAITKRMVSSNNNDSASHYPGRRQGLFVIATDCYNNNGEYTKSLRSTIKNVMQ-T 779
Query: 779 GLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDY 838
G +LGLG +G++L+TGSSL ETMEA++ C V+ E+FDA+VCNSGSELY+PWRD AD DY
Sbjct: 780 GSTLGLGSIGYVLLTGSSLRETMEALKWCQVSPEEFDALVCNSGSELYYPWRDTSADTDY 839
Query: 839 EAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIR 898
E+H+EYRWPGENVRS V R+A+ E G EDDI V SSRC SYS+K A RK +++
Sbjct: 840 ESHIEYRWPGENVRSTVTRLAKLEGGNEDDITEHVGLWSSRCCSYSVKSIANIRKTEDLH 899
Query: 899 QRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDY 958
QRLRMRGFRCN+VY RA SRLNV+P +ASR QALRYLSI+WGIDLSKMVVFVG+KGDTD+
Sbjct: 900 QRLRMRGFRCNIVYVRAASRLNVLPLYASRRQALRYLSIKWGIDLSKMVVFVGDKGDTDH 959
Query: 959 EDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDV--VPPDSPNIAYIEESYEPQDLSA 1016
EDLL GLHKT++L+ SV GSEKLLH E++F +E + + D PNI+ E SY DL A
Sbjct: 960 EDLLAGLHKTIVLKSSVENGSEKLLHSENSFNKEGIATLSRDGPNISISEGSYGVHDLLA 1019
Query: 1017 ALKAIKIK 1024
AL +IK
Sbjct: 1020 ALNVAEIK 1027
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356515414|ref|XP_003526395.1| PREDICTED: probable sucrose-phosphate synthase 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1602 bits (4147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 779/1034 (75%), Positives = 889/1034 (85%), Gaps = 12/1034 (1%)
Query: 2 AGNEWINGYLEAILDAGSG-KTKMNDGKFK-LSKFEETK-QKEGQLFSPT-KYFVEEVIN 57
A NEW+NGYLEAILD GS K K NDGK K +KFE+ K Q+E +LF+PT KYFVEEV+N
Sbjct: 3 AVNEWLNGYLEAILDVGSSVKEKKNDGKVKNFAKFEQEKHQREEKLFNPTTKYFVEEVVN 62
Query: 58 SFDESDLHRTWVKVIATRNTRERSNRLENMCWRIWHLARKKKQIAWEDAQRLAKRRLERE 117
SF+E DL+RTWVKV A RNTRERSNRLENMCWRIWHL RKKKQIAW+DAQRLA++RL+RE
Sbjct: 63 SFNEHDLYRTWVKVTARRNTRERSNRLENMCWRIWHLTRKKKQIAWDDAQRLARKRLDRE 122
Query: 118 QGRNDAADDLSELSEGEKEKGDSINASESLK-----EIPRINSDMQIWSEDDKSSRNLYI 172
QGRNDAA+DLSELSEGEKEK D+ + +L+ I RI S+MQ+WSE+D +SRNLY+
Sbjct: 123 QGRNDAANDLSELSEGEKEKADANANANALEPFKDNNISRITSEMQLWSEEDDNSRNLYV 182
Query: 173 VLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASP-EVDS 231
VLIS+HGLVRG+NME+GRDSDTGGQVKYVVELARALANT+G+YRVDLLTRQIASP EVDS
Sbjct: 183 VLISVHGLVRGENMELGRDSDTGGQVKYVVELARALANTKGIYRVDLLTRQIASPVEVDS 242
Query: 232 SYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMAR 291
YGEP EMLSCPSDG+ GAYIIR+PCG RD+YI KESLWP++ EFVDGAL HIVNMAR
Sbjct: 243 GYGEPIEMLSCPSDGSDCGGAYIIRLPCGPRDRYIPKESLWPHLPEFVDGALGHIVNMAR 302
Query: 292 AIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRL 351
+GEQVN GKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRL
Sbjct: 303 VLGEQVNSGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRL 362
Query: 352 PKD-INASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQR 410
++ INA+YKIMRRIEAEELG+DA+EMVVTSTRQEIE QWGLYDGFDLKLERKLRVRR+R
Sbjct: 363 SREAINATYKIMRRIEAEELGVDAAEMVVTSTRQEIEEQWGLYDGFDLKLERKLRVRRRR 422
Query: 411 GVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMR 470
GVSC GR PRMVVIPPGMDFSYVTTQD++ G+ DL S IG+DR QSKRNLPP+WSE+MR
Sbjct: 423 GVSCLGRRTPRMVVIPPGMDFSYVTTQDSVEGEGDLNSFIGSDRAQSKRNLPPIWSEIMR 482
Query: 471 FFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSV 530
FFTNPHKPTILALSRPDPKKNVTTLLKAFGECQ LR+LAN+TLILGNRDDIE+MS+SSS
Sbjct: 483 FFTNPHKPTILALSRPDPKKNVTTLLKAFGECQALRKLANLTLILGNRDDIEEMSSSSST 542
Query: 531 VLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAA 590
VLT VLKLIDKYDLYGQVAYPKHHKQS+VP+IYRLAAKTKGVFINPALVEPFGLT+IEAA
Sbjct: 543 VLTMVLKLIDKYDLYGQVAYPKHHKQSEVPEIYRLAAKTKGVFINPALVEPFGLTLIEAA 602
Query: 591 AYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNI 650
AYGLPVVATKNGGPVDILKALNNGLL+DPHDQ AI DALLKL+ADKN+W ECRKNGLKNI
Sbjct: 603 AYGLPVVATKNGGPVDILKALNNGLLIDPHDQKAIEDALLKLVADKNLWLECRKNGLKNI 662
Query: 651 HRFSWPEHCRNYLSHVEHSRNRHPNSHLEIMTIPGEPLSDSLRDVEDFSLRFSMEGDFKL 710
HRFSWPEHCRNYLSHVE+ RNRH S LEI + E +SDSLRDVED S RFS EGD K
Sbjct: 663 HRFSWPEHCRNYLSHVEYGRNRHSTSRLEITPMTEESISDSLRDVEDISFRFSTEGDSKQ 722
Query: 711 NAELDAVTRQKNLIEAITQKASFNGNASVTHSPGRRQMLIVIAADCYDSDGNTTET-FQA 769
N E+D RQK +IEAI + S G ++ ++ PGRRQ L+V+ ADCYDSDGN E FQA
Sbjct: 723 NGEMDTAARQKQIIEAIMCRVSSTGKSNASYFPGRRQRLVVVGADCYDSDGNIAEEDFQA 782
Query: 770 TIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPW 829
I NVMK+ + G+VG +L+TG S ET EA+ VNIE+FDA+VCNSGSE+Y+PW
Sbjct: 783 VIMNVMKSVRPGIRSGKVGVVLLTGLSFQETTEALNSFQVNIEEFDAVVCNSGSEMYYPW 842
Query: 830 RDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGA 889
+D++AD DYEAHVEY WPGEN+RS + R+A+ +DG E+ I+ + A SSRC SYS+K GA
Sbjct: 843 KDLMADADYEAHVEYAWPGENIRSTITRLAKVDDGEENGIIEYASACSSRCYSYSVKSGA 902
Query: 890 ETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVF 949
RK+D +RQRLRMRG RCNLVYT AG RLNV+P FASR QALRYLS++WGIDLSK+VVF
Sbjct: 903 MIRKIDELRQRLRMRGLRCNLVYTHAGLRLNVIPLFASRKQALRYLSVKWGIDLSKVVVF 962
Query: 950 VGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESY 1009
VGEKGDTDYE+L+ G+ KTL+L+G+V YGSE+LL ED++KREDV DSPNI Y E+SY
Sbjct: 963 VGEKGDTDYEELVAGIQKTLVLKGAVEYGSERLLRSEDSYKREDVFSQDSPNIIYAEKSY 1022
Query: 1010 EPQDLSAALKAIKI 1023
E D+SA L+ +K+
Sbjct: 1023 EDCDISAILEHLKV 1036
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42566384|ref|NP_192750.2| sucrose-phosphate synthase [Arabidopsis thaliana] gi|79325049|ref|NP_001031609.1| sucrose-phosphate synthase [Arabidopsis thaliana] gi|353678117|sp|F4JLK2.1|SPS4_ARATH RecName: Full=Probable sucrose-phosphate synthase 4; AltName: Full=Sucrose phosphate synthase 4F; Short=AtSPS4F; AltName: Full=UDP-glucose-fructose-phosphate glucosyltransferase gi|332657444|gb|AEE82844.1| sucrose-phosphate synthase [Arabidopsis thaliana] gi|332657445|gb|AEE82845.1| sucrose-phosphate synthase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1565 bits (4052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 756/1050 (72%), Positives = 879/1050 (83%), Gaps = 26/1050 (2%)
Query: 1 MAGNEWINGYLEAILDAGSGKTKMNDGKFKL-SKFEETKQKEGQ---------------L 44
MA N+WIN YLEAILD G+ K K + K+ K + K+ Q +
Sbjct: 1 MARNDWINSYLEAILDVGTSKKKRFESNSKIVQKLGDINSKDHQEKVFGDMNGKDHQEKV 60
Query: 45 FSPTKYFVEEVINSFDESDLHRTWVKVIATRNTRERSNRLENMCWRIWHLARKKKQIAWE 104
FSP KYFVEEV+NSFDESDL++TW+KVIATRNTRERSNRLEN+CWRIWHLARKKKQI W+
Sbjct: 61 FSPIKYFVEEVVNSFDESDLYKTWIKVIATRNTRERSNRLENICWRIWHLARKKKQIVWD 120
Query: 105 DAQRLAKRRLEREQGRNDAADDL-SELSEGEKEKGDSINASESL--------KEIPRINS 155
D RL+KRR+EREQGRNDA +DL SELSEGEK+K D + +PRI S
Sbjct: 121 DGVRLSKRRIEREQGRNDAEEDLLSELSEGEKDKNDGEKEKSEVVTTLEPPRDHMPRIRS 180
Query: 156 DMQIWSEDDKSSRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVY 215
+MQIWSEDDKSSRNLYIVLISMHGLVRG+NME+GRDSDTGGQVKYVVELARALANTEGV+
Sbjct: 181 EMQIWSEDDKSSRNLYIVLISMHGLVRGENMELGRDSDTGGQVKYVVELARALANTEGVH 240
Query: 216 RVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWPYI 275
RVDLLTRQI+SPEVD SYGEP EMLSCP +G+ SCG+YIIRIPCG+RDKYI KESLWP+I
Sbjct: 241 RVDLLTRQISSPEVDYSYGEPVEMLSCPPEGSDSCGSYIIRIPCGSRDKYIPKESLWPHI 300
Query: 276 HEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGH 335
EFVDGALNHIV++AR++GEQVNGGKP WPYVIHGHYADAGEVAAHL+GALNVPMVLTGH
Sbjct: 301 PEFVDGALNHIVSIARSLGEQVNGGKPIWPYVIHGHYADAGEVAAHLAGALNVPMVLTGH 360
Query: 336 SLGRNKFEQLLKQGRLPK-DINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYD 394
SLGRNKFEQLL+QGR+ + DI+ +YKIMRRIEAEE LDA+EMVVTSTRQEI+ QWGLYD
Sbjct: 361 SLGRNKFEQLLQQGRITREDIDRTYKIMRRIEAEEQSLDAAEMVVTSTRQEIDAQWGLYD 420
Query: 395 GFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDR 454
GFD+KLERKLRVRR+RGVSC GR+MPRMVVIPPGMDFSYV TQD+ D DLKSLIG DR
Sbjct: 421 GFDIKLERKLRVRRRRGVSCLGRYMPRMVVIPPGMDFSYVLTQDSQEPDGDLKSLIGPDR 480
Query: 455 TQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLI 514
Q K+ +PP+WSE+MRFF+NPHKPTILALSRPD KKNVTTL+KAFGECQPLRELAN+ LI
Sbjct: 481 NQIKKPVPPIWSEIMRFFSNPHKPTILALSRPDHKKNVTTLVKAFGECQPLRELANLVLI 540
Query: 515 LGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFI 574
LGNRDDIE+M NSSSVVL VLKLID+YDLYGQVAYPKHHKQS+VPDIYRLAAKTKGVFI
Sbjct: 541 LGNRDDIEEMPNSSSVVLMNVLKLIDQYDLYGQVAYPKHHKQSEVPDIYRLAAKTKGVFI 600
Query: 575 NPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLA 634
NPALVEPFGLT+IEAAAYGLP+VAT+NGGPVDI+KALNNGLLVDPHDQ AI+DALLKL+A
Sbjct: 601 NPALVEPFGLTLIEAAAYGLPIVATRNGGPVDIVKALNNGLLVDPHDQQAISDALLKLVA 660
Query: 635 DKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNRHPNSHLEIMTIPGEPLSDSLRD 694
+K++W+ECRKNGLKNIHRFSWPEHCRNYLSHVEH RNRHP S L+IM +P E SDSLRD
Sbjct: 661 NKHLWAECRKNGLKNIHRFSWPEHCRNYLSHVEHCRNRHPTSSLDIMKVPEELTSDSLRD 720
Query: 695 VEDFSLRFSMEGDFKLNAELDAVTRQKNLIEAITQKASFNGNASVTHSPGRRQMLIVIAA 754
V+D SLRFS EGDF LN ELDA TRQK L++AI+Q S G ++ +SPGRRQML V+A
Sbjct: 721 VDDISLRFSTEGDFTLNGELDAGTRQKKLVDAISQMNSMKGCSAAIYSPGRRQMLFVVAV 780
Query: 755 DCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDF 814
D YD +GN IKN++KAA L+ G G++GF+L +GSSL E ++ ++ +N+EDF
Sbjct: 781 DSYDDNGNIKANLNEIIKNMIKAADLTSGKGKIGFVLASGSSLQEVVDITQKNLINLEDF 840
Query: 815 DAIVCNSGSELYFPWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVD 874
DAIVCNSGSE+Y+PWRDM+ D DYE HVEY+WPGE++RSV+ R+ E AEDDI +
Sbjct: 841 DAIVCNSGSEIYYPWRDMMVDADYETHVEYKWPGESIRSVILRLICTEPAAEDDITEYAS 900
Query: 875 ASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRY 934
+ S+RC + S+K G +TR+VD++RQRLRMRG RCN+VYT A +RLNV+P ASRIQALRY
Sbjct: 901 SCSTRCYAISVKQGVKTRRVDDLRQRLRMRGLRCNIVYTHAATRLNVIPLCASRIQALRY 960
Query: 935 LSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDV 994
LSIRWGID+SK V F+GEKGDTDYEDLL GLHKT+IL+G V SEKLL E+ FKRED
Sbjct: 961 LSIRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKGVVGSDSEKLLRSEENFKREDA 1020
Query: 995 VPPDSPNIAYIEESYEPQDLSAALKAIKIK 1024
VP +SPNI+Y++E+ Q++ + L+A IK
Sbjct: 1021 VPQESPNISYVKENGGSQEIMSTLEAYGIK 1050
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|51970018|dbj|BAD43701.1| sucrose-phosphate synthase - like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1562 bits (4045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 755/1050 (71%), Positives = 878/1050 (83%), Gaps = 26/1050 (2%)
Query: 1 MAGNEWINGYLEAILDAGSGKTKMNDGKFKL-SKFEETKQKEGQ---------------L 44
MA N+WIN YLEAILD G+ K K + K+ K + K+ Q +
Sbjct: 1 MARNDWINSYLEAILDVGTSKKKRFESNSKIVQKLGDINSKDHQEKVFGDMNGKDHQEKV 60
Query: 45 FSPTKYFVEEVINSFDESDLHRTWVKVIATRNTRERSNRLENMCWRIWHLARKKKQIAWE 104
FSP KYFVEEV+NSFDESDL++TW+KVIATRNTRERSNRLEN+CWRIWHLARKKKQI W+
Sbjct: 61 FSPIKYFVEEVVNSFDESDLYKTWIKVIATRNTRERSNRLENICWRIWHLARKKKQIVWD 120
Query: 105 DAQRLAKRRLEREQGRNDAADDL-SELSEGEKEKGDSINASESL--------KEIPRINS 155
D RL+KRR+EREQGRNDA +DL SELSEGEK+K D + +PRI S
Sbjct: 121 DGVRLSKRRIEREQGRNDAEEDLLSELSEGEKDKNDGEKEKSEVVTTLEPPRDHMPRIRS 180
Query: 156 DMQIWSEDDKSSRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVY 215
+MQIWSEDDKSSRNLYIVLISMHGLVRG+NME+GRDSDTGGQVKYVVELARALANTEGV+
Sbjct: 181 EMQIWSEDDKSSRNLYIVLISMHGLVRGENMELGRDSDTGGQVKYVVELARALANTEGVH 240
Query: 216 RVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWPYI 275
RVDLLTRQI+SPEVD SYGEP EMLSCP +G+ SC +YIIRIPCG+RDKYI KESLWP+I
Sbjct: 241 RVDLLTRQISSPEVDYSYGEPVEMLSCPPEGSDSCDSYIIRIPCGSRDKYIPKESLWPHI 300
Query: 276 HEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGH 335
EFVDGALNHIV++AR++GEQVNGGKP WPYVIHGHYADAGEVAAHL+GALNVPMVLTGH
Sbjct: 301 PEFVDGALNHIVSIARSLGEQVNGGKPIWPYVIHGHYADAGEVAAHLAGALNVPMVLTGH 360
Query: 336 SLGRNKFEQLLKQGRLPK-DINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYD 394
SLGRNKFEQLL+QGR+ + DI+ +YKIMRRIEAEE LDA+EMVVTSTRQEI+ QWGLYD
Sbjct: 361 SLGRNKFEQLLQQGRITREDIDRTYKIMRRIEAEEQSLDAAEMVVTSTRQEIDAQWGLYD 420
Query: 395 GFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDR 454
GFD+KLERKLRVRR+RGVSC GR+MPRMVVIPPGMDFSYV TQD+ D DLKSLIG DR
Sbjct: 421 GFDIKLERKLRVRRRRGVSCLGRYMPRMVVIPPGMDFSYVLTQDSQEPDGDLKSLIGPDR 480
Query: 455 TQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLI 514
Q K+ +PP+WSE+MRFF+NPHKPTILALSRPD KKNVTTL+KAFGECQPLRELAN+ LI
Sbjct: 481 NQIKKPVPPIWSEIMRFFSNPHKPTILALSRPDHKKNVTTLVKAFGECQPLRELANLVLI 540
Query: 515 LGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFI 574
LGNRDDIE+M NSSSVVL VLKLID+YDLYGQVAYPKHHKQS+VPDIYRLAAKTKGVFI
Sbjct: 541 LGNRDDIEEMPNSSSVVLMNVLKLIDQYDLYGQVAYPKHHKQSEVPDIYRLAAKTKGVFI 600
Query: 575 NPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLA 634
NPALVEPFGLT+IEAAAYGLP+VAT+NGGPVDI+KALNNGLLVDPHDQ AI+DALLKL+A
Sbjct: 601 NPALVEPFGLTLIEAAAYGLPIVATRNGGPVDIVKALNNGLLVDPHDQQAISDALLKLVA 660
Query: 635 DKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNRHPNSHLEIMTIPGEPLSDSLRD 694
+K++W+ECRKNGLKNIHRFSWPEHCRNYLSHVEH RNRHP S L+IM +P E SDSLRD
Sbjct: 661 NKHLWAECRKNGLKNIHRFSWPEHCRNYLSHVEHCRNRHPTSSLDIMKVPEELTSDSLRD 720
Query: 695 VEDFSLRFSMEGDFKLNAELDAVTRQKNLIEAITQKASFNGNASVTHSPGRRQMLIVIAA 754
V+D SLRFS EGDF LN ELDA TRQK L++AI+Q S G ++ +SPGRRQML V+A
Sbjct: 721 VDDISLRFSTEGDFTLNGELDAGTRQKKLVDAISQMNSMKGCSAAIYSPGRRQMLFVVAV 780
Query: 755 DCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDF 814
D YD +GN IKN++KAA L+ G G++GF+L +GSSL E ++ ++ +N+EDF
Sbjct: 781 DSYDDNGNIKANLNEIIKNMIKAADLTSGKGKIGFVLASGSSLQEVVDITQKNLINLEDF 840
Query: 815 DAIVCNSGSELYFPWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVD 874
DAIVCNSGSE+Y+PWRDM+ D DYE HVEY+WPGE++RSV+ R+ E AEDDI +
Sbjct: 841 DAIVCNSGSEIYYPWRDMMVDADYETHVEYKWPGESIRSVILRLICTEPAAEDDITEYAS 900
Query: 875 ASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRY 934
+ S+RC + S+K G +TR+VD++RQRLRMRG RCN+VYT A +RLNV+P ASRIQALRY
Sbjct: 901 SCSTRCYAISVKQGVKTRRVDDLRQRLRMRGLRCNIVYTHAATRLNVIPLCASRIQALRY 960
Query: 935 LSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDV 994
LSIRWGID+SK V F+GEKGDTDYEDLL GLHKT+IL+G V SEKLL E+ FKRED
Sbjct: 961 LSIRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKGVVGSDSEKLLRSEENFKREDA 1020
Query: 995 VPPDSPNIAYIEESYEPQDLSAALKAIKIK 1024
VP +SPNI+Y++E+ Q++ + L+A IK
Sbjct: 1021 VPQESPNISYVKENGGSQEIMSTLEAYGIK 1050
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297809217|ref|XP_002872492.1| ATSPS4F [Arabidopsis lyrata subsp. lyrata] gi|297318329|gb|EFH48751.1| ATSPS4F [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1561 bits (4042), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 758/1051 (72%), Positives = 874/1051 (83%), Gaps = 27/1051 (2%)
Query: 1 MAGNEWINGYLEAILDAGSGKTKMNDGKFKL-SKFEETKQKEGQ---------------- 43
MA N+WIN YLEAILD G+ K + K+ K + K+ Q
Sbjct: 1 MARNDWINSYLEAILDVGTSNKKRFESNSKIVQKLGDMNSKDHQDKVFGDMNSKDHHQEK 60
Query: 44 LFSPTKYFVEEVINSFDESDLHRTWVKVIATRNTRERSNRLENMCWRIWHLARKKKQIAW 103
+FSP KYFVEEV+NSFDESDL++TW+KVIATRNTRERSNRLEN+CWRIWHLARKKKQI W
Sbjct: 61 VFSPIKYFVEEVVNSFDESDLYKTWIKVIATRNTRERSNRLENICWRIWHLARKKKQIVW 120
Query: 104 EDAQRLAKRRLEREQGRNDAADDL-SELSEGEKEKGDSINASESL--------KEIPRIN 154
+D RL+KRR+EREQGRNDA +DL SELSEGEKEK D + +PRI
Sbjct: 121 DDGIRLSKRRIEREQGRNDAEEDLLSELSEGEKEKNDGEKEKNEVVTTLEPPRDHMPRIR 180
Query: 155 SDMQIWSEDDKSSRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGV 214
S+MQIWSEDDKSSRNLYIVLISMHGLVRG+NME+GRDSDTGGQVKYVVELARALANTEGV
Sbjct: 181 SEMQIWSEDDKSSRNLYIVLISMHGLVRGENMELGRDSDTGGQVKYVVELARALANTEGV 240
Query: 215 YRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWPY 274
+RVDLLTRQI+SPEVD SYGEP EMLSCP +G+ SCG+YIIRIPCG+RDKYI KESLWP+
Sbjct: 241 HRVDLLTRQISSPEVDYSYGEPVEMLSCPPEGSDSCGSYIIRIPCGSRDKYIPKESLWPH 300
Query: 275 IHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTG 334
I EFVDGALNHIV++AR++GEQVNGGKP WPYVIHGHYADAGEVAAHL+GALNVPMVLTG
Sbjct: 301 IPEFVDGALNHIVSIARSLGEQVNGGKPIWPYVIHGHYADAGEVAAHLAGALNVPMVLTG 360
Query: 335 HSLGRNKFEQLLKQGRLPK-DINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLY 393
HSLGRNKFEQLL+QGR+ + DI+ +YKIMRRIEAEE LDA+EMVVTSTRQEIE QWGLY
Sbjct: 361 HSLGRNKFEQLLQQGRITREDIDRTYKIMRRIEAEEQSLDAAEMVVTSTRQEIEAQWGLY 420
Query: 394 DGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGND 453
DGFD+KLERKLRVRR+RGVSC GR+MPRMVVIPPGMDFSYV TQD+ D DLKSLIG D
Sbjct: 421 DGFDIKLERKLRVRRRRGVSCLGRYMPRMVVIPPGMDFSYVLTQDSQVPDGDLKSLIGPD 480
Query: 454 RTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL 513
R Q K+ +PP+WSE+MRFF+NPHKPTILALSRPD KKNVTTL+KAFGECQPLRELAN+ L
Sbjct: 481 RNQIKKPVPPIWSEIMRFFSNPHKPTILALSRPDHKKNVTTLVKAFGECQPLRELANLVL 540
Query: 514 ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVF 573
ILGNRDDIE+M NSSSVVL VLKLID+YDLYGQVAYPKHHKQS+VPDIYRLAAKTKGVF
Sbjct: 541 ILGNRDDIEEMPNSSSVVLMNVLKLIDQYDLYGQVAYPKHHKQSEVPDIYRLAAKTKGVF 600
Query: 574 INPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLL 633
INPALVEPFGLT+IEAAAYGLP+VAT+NGGPVDI+KALNNGLLVDPHDQ AI+DALLKL+
Sbjct: 601 INPALVEPFGLTLIEAAAYGLPIVATRNGGPVDIVKALNNGLLVDPHDQQAISDALLKLV 660
Query: 634 ADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNRHPNSHLEIMTIPGEPLSDSLR 693
A+K++W+ECRKNGLKNIHRFSWPEHCRNYLSHVEH RNRHP S L+IM +P E SDSL
Sbjct: 661 ANKHLWAECRKNGLKNIHRFSWPEHCRNYLSHVEHCRNRHPTSSLDIMKVPEELTSDSLM 720
Query: 694 DVEDFSLRFSMEGDFKLNAELDAVTRQKNLIEAITQKASFNGNASVTHSPGRRQMLIVIA 753
DV+D SLRFS EGDF LN ELDA TRQ+ L++AI+Q S G SV +SPGRRQML V+A
Sbjct: 721 DVDDISLRFSTEGDFTLNGELDAGTRQRKLVDAISQMNSMKGRPSVIYSPGRRQMLFVVA 780
Query: 754 ADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIED 813
D YD GN IK+VMKAA L+ G++GF+L +GSSL E +E ++ +N+ED
Sbjct: 781 VDSYDDKGNIKANLDDIIKDVMKAADLTSRKGKIGFVLASGSSLQEVVEITQKNLINLED 840
Query: 814 FDAIVCNSGSELYFPWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFV 873
FDAIVCNSGSE+Y+PWRDM+ D DYE HVEY+WPGE++RSV+ R+A E EDDI +
Sbjct: 841 FDAIVCNSGSEIYYPWRDMMVDADYETHVEYKWPGESIRSVILRLACTEPATEDDITEYA 900
Query: 874 DASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALR 933
A S+RC + S+K G +TR+VD++RQRLRMRG RCN+VYT A +RLNV+P ASRIQALR
Sbjct: 901 SACSTRCYAISVKQGVKTRRVDDLRQRLRMRGLRCNIVYTHAATRLNVIPLCASRIQALR 960
Query: 934 YLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKRED 993
YLSIRWGID+SK V F+GEKGDTDYEDLL GLHKT+IL+ V SEKLL E+ FKRED
Sbjct: 961 YLSIRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKNVVGSDSEKLLRSEENFKRED 1020
Query: 994 VVPPDSPNIAYIEESYEPQDLSAALKAIKIK 1024
VP +SPNI+Y++E+ Q++ + L+A IK
Sbjct: 1021 AVPQESPNISYVKENGGHQEILSTLEAYGIK 1051
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1024 | ||||||
| TAIR|locus:2124680 | 1050 | ATSPS4F [Arabidopsis thaliana | 0.963 | 0.94 | 0.722 | 0.0 | |
| TAIR|locus:2010647 | 1062 | SPS3F "sucrose phosphate synth | 0.695 | 0.670 | 0.667 | 9.7e-313 | |
| TAIR|locus:2149179 | 1043 | SPS1F "sucrose phosphate synth | 0.788 | 0.773 | 0.573 | 3.5e-297 | |
| TAIR|locus:2184891 | 1047 | SPS2F "sucrose phosphate synth | 0.817 | 0.799 | 0.541 | 3.1e-241 | |
| TAIR|locus:2206865 | 942 | SUS6 "sucrose synthase 6" [Ara | 0.560 | 0.609 | 0.254 | 2e-32 | |
| TAIR|locus:2155894 | 807 | SUS2 "sucrose synthase 2" [Ara | 0.459 | 0.583 | 0.264 | 4.8e-32 | |
| TAIR|locus:2166203 | 836 | SUS5 "sucrose synthase 5" [Ara | 0.457 | 0.559 | 0.260 | 4.6e-29 | |
| TAIR|locus:2084756 | 808 | SUS4 "AT3G43190" [Arabidopsis | 0.454 | 0.575 | 0.261 | 1.9e-28 | |
| TAIR|locus:2137829 | 809 | SUS3 "AT4G02280" [Arabidopsis | 0.449 | 0.568 | 0.258 | 4.1e-28 | |
| TAIR|locus:2180489 | 808 | SUS1 "AT5G20830" [Arabidopsis | 0.454 | 0.575 | 0.263 | 6.7e-28 |
| TAIR|locus:2124680 ATSPS4F [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3835 (1355.0 bits), Expect = 0., P = 0.
Identities = 720/997 (72%), Positives = 838/997 (84%)
Query: 38 KQKEGQLFSPTKYFVEEVINSFDESDLHRTWVKVIATRNTRERSNRLENMCWRIWHLARK 97
K + ++FSP KYFVEEV+NSFDESDL++TW+KVIATRNTRERSNRLEN+CWRIWHLARK
Sbjct: 54 KDHQEKVFSPIKYFVEEVVNSFDESDLYKTWIKVIATRNTRERSNRLENICWRIWHLARK 113
Query: 98 KKQIAWEDAQRLAKRRLEREQGRNDAADDL-SELSEGEKEKGDS-------INASESLKE 149
KKQI W+D RL+KRR+EREQGRNDA +DL SELSEGEK+K D + E ++
Sbjct: 114 KKQIVWDDGVRLSKRRIEREQGRNDAEEDLLSELSEGEKDKNDGEKEKSEVVTTLEPPRD 173
Query: 150 -IPRINSDMQIWSEDDKSSRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARAL 208
+PRI S+MQIWSEDDKSSRNLYIVLISMHGLVRG+NME+GRDSDTGGQVKYVVELARAL
Sbjct: 174 HMPRIRSEMQIWSEDDKSSRNLYIVLISMHGLVRGENMELGRDSDTGGQVKYVVELARAL 233
Query: 209 ANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAK 268
ANTEGV+RVDLLTRQI+SPEVD SYGEP EMLSCP +G+ SCG+YIIRIPCG+RDKYI K
Sbjct: 234 ANTEGVHRVDLLTRQISSPEVDYSYGEPVEMLSCPPEGSDSCGSYIIRIPCGSRDKYIPK 293
Query: 269 ESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNV 328
ESLWP+I EFVDGALNHIV++AR++GEQVNGGKP WPYVIHGHYADAGEVAAHL+GALNV
Sbjct: 294 ESLWPHIPEFVDGALNHIVSIARSLGEQVNGGKPIWPYVIHGHYADAGEVAAHLAGALNV 353
Query: 329 PMVLTGHSLGRNKFEQLLKQGRLPK-DINASYKIMRRIEAEELGLDASEMVVTSTRQEIE 387
PMVLTGHSLGRNKFEQLL+QGR+ + DI+ +YKIMRRIEAEE LDA+EMVVTSTRQEI+
Sbjct: 354 PMVLTGHSLGRNKFEQLLQQGRITREDIDRTYKIMRRIEAEEQSLDAAEMVVTSTRQEID 413
Query: 388 MQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLK 447
QWGLYDGFD+KLERKLRVRR+RGVSC GR+MPRMVVIPPGMDFSYV TQD+ D DLK
Sbjct: 414 AQWGLYDGFDIKLERKLRVRRRRGVSCLGRYMPRMVVIPPGMDFSYVLTQDSQEPDGDLK 473
Query: 448 SLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRE 507
SLIG DR Q K+ +PP+WSE+MRFF+NPHKPTILALSRPD KKNVTTL+KAFGECQPLRE
Sbjct: 474 SLIGPDRNQIKKPVPPIWSEIMRFFSNPHKPTILALSRPDHKKNVTTLVKAFGECQPLRE 533
Query: 508 LANMTLILGNRDDIEDMSNXXXXXXXXXXKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAA 567
LAN+ LILGNRDDIE+M N KLID+YDLYGQVAYPKHHKQS+VPDIYRLAA
Sbjct: 534 LANLVLILGNRDDIEEMPNSSSVVLMNVLKLIDQYDLYGQVAYPKHHKQSEVPDIYRLAA 593
Query: 568 KTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNXXXX 627
KTKGVFINPALVEPFGLT+IEAAAYGLP+VAT+NGGPVDI+KALNNGLLVDPHDQ
Sbjct: 594 KTKGVFINPALVEPFGLTLIEAAAYGLPIVATRNGGPVDIVKALNNGLLVDPHDQQAISD 653
Query: 628 XXXXXXXXXNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNRHPNSHLEIMTIPGEP 687
++W+ECRKNGLKNIHRFSWPEHCRNYLSHVEH RNRHP S L+IM +P E
Sbjct: 654 ALLKLVANKHLWAECRKNGLKNIHRFSWPEHCRNYLSHVEHCRNRHPTSSLDIMKVPEEL 713
Query: 688 LSDSLRDVEDFSLRFSMEGDFKLNAELDAVTRQKNLIEAITQKASFNGNASVTHSPGRRQ 747
SDSLRDV+D SLRFS EGDF LN ELDA TRQK L++AI+Q S G ++ +SPGRRQ
Sbjct: 714 TSDSLRDVDDISLRFSTEGDFTLNGELDAGTRQKKLVDAISQMNSMKGCSAAIYSPGRRQ 773
Query: 748 MLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRC 807
ML V+A D YD +GN IKN++KAA L+ G G++GF+L +GSSL E ++ ++
Sbjct: 774 MLFVVAVDSYDDNGNIKANLNEIIKNMIKAADLTSGKGKIGFVLASGSSLQEVVDITQKN 833
Query: 808 TVNIEDFDAIVCNSGSELYFPWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAED 867
+N+EDFDAIVCNSGSE+Y+PWRDM+ D DYE HVEY+WPGE++RSV+ R+ E AED
Sbjct: 834 LINLEDFDAIVCNSGSEIYYPWRDMMVDADYETHVEYKWPGESIRSVILRLICTEPAAED 893
Query: 868 DIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFAS 927
DI + + S+RC + S+K G +TR+VD++RQRLRMRG RCN+VYT A +RLNV+P AS
Sbjct: 894 DITEYASSCSTRCYAISVKQGVKTRRVDDLRQRLRMRGLRCNIVYTHAATRLNVIPLCAS 953
Query: 928 RIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987
RIQALRYLSIRWGID+SK V F+GEKGDTDYEDLL GLHKT+IL+G V SEKLL E+
Sbjct: 954 RIQALRYLSIRWGIDMSKTVFFLGEKGDTDYEDLLGGLHKTIILKGVVGSDSEKLLRSEE 1013
Query: 988 AFKREDVVPPDSPNIAYIEESYEPQDLSAALKAIKIK 1024
FKRED VP +SPNI+Y++E+ Q++ + L+A IK
Sbjct: 1014 NFKREDAVPQESPNISYVKENGGSQEIMSTLEAYGIK 1050
|
|
| TAIR|locus:2010647 SPS3F "sucrose phosphate synthase 3F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2507 (887.6 bits), Expect = 9.7e-313, Sum P(2) = 9.7e-313
Identities = 487/730 (66%), Positives = 569/730 (77%)
Query: 1 MAGNEWINGYLEAILDAGSGKTKMNDGKFKLSKFEETKQKEGQLFSPTKYFVEEVINSFD 60
MAGNEWINGYLEAILD+ + + K + S ++ +GQ F+PTKYFVEEV+ D
Sbjct: 1 MAGNEWINGYLEAILDSQAQGIEETQQKPQASV--NLREGDGQYFNPTKYFVEEVVTGVD 58
Query: 61 ESDLHRTWVKVIATRNTRERSNRLENMCWRIWHLARKKKQIAWEDAQRLAKRRLEREQGR 120
E+DLHRTW+KV+ATRN+RER++RLENMCWRIWHL RKKKQ+ WED+QR+A RRLEREQGR
Sbjct: 59 ETDLHRTWLKVVATRNSRERNSRLENMCWRIWHLTRKKKQLEWEDSQRIANRRLEREQGR 118
Query: 121 NDAADDLSE-LSEGEKEKG--DSINASESLKEIPRINSDMQIWSEDDKSSRNLYIVLISM 177
DA +DLSE LSEGEK G + + +++ R S+++IWS+D K +R LY+VLIS+
Sbjct: 119 RDATEDLSEDLSEGEKGDGLGEIVQPETPRRQLQRNLSNLEIWSDDKKENR-LYVVLISL 177
Query: 178 HGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPN 237
HGLVRG+NME+G DSDTGGQVKYVVELARALA GVYRVDL TRQI S EVD SY EP
Sbjct: 178 HGLVRGENMELGSDSDTGGQVKYVVELARALARMPGVYRVDLFTRQICSSEVDWSYAEPT 237
Query: 238 EMLS----CPSDGTG-SCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARA 292
EML+ C D TG S GAYIIRIP G RDKY+ KE LWP++ EFVDGAL HI+NM++
Sbjct: 238 EMLTTAEDCDGDETGESSGAYIIRIPFGPRDKYLNKEILWPFVQEFVDGALAHILNMSKV 297
Query: 293 IGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLP 352
+GEQ+ GKP WPYVIHGHYADAG+ AA LSGALNVPMVLTGHSLGRNK EQLLKQGR
Sbjct: 298 LGEQIGKGKPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQS 357
Query: 353 K-DINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRG 411
K DIN++YKI RRIEAEEL LDA+E+V+TSTRQEI+ QWGLYDGFD+KLE+ LR R +RG
Sbjct: 358 KEDINSTYKIKRRIEAEELSLDAAELVITSTRQEIDEQWGLYDGFDVKLEKVLRARARRG 417
Query: 412 VSCFGRFMPRMVVIPPGMDFSYVTTQ-DTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMR 470
V+C GRFMPRM VIPPGMDF+ V Q DT GD DL SL+G S + +P +WSEVMR
Sbjct: 418 VNCHGRFMPRMAVIPPGMDFTNVEVQEDTPEGDGDLASLVGGTEGSSPKAVPTIWSEVMR 477
Query: 471 FFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNXXXX 530
FFTNPHKP ILALSRPDPKKN+TTLLKAFGEC+PLRELAN+TLI+GNRDDI+++S+
Sbjct: 478 FFTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIDELSSGNAS 537
Query: 531 XXXXXXKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAA 590
KLIDKYDLYG VAYPKHHKQSDVPDIYRLAA TKGVFINPALVEPFGLT+IEAA
Sbjct: 538 VLTTVLKLIDKYDLYGSVAYPKHHKQSDVPDIYRLAANTKGVFINPALVEPFGLTLIEAA 597
Query: 591 AYGLPVVATKNGGPVDILKALNNGLLVDPHDQNXXXXXXXXXXXXXNMWSECRKNGLKNI 650
A+GLP+VATKNGGPVDI +AL+NGLLVDPHDQ N+W ECR NG KNI
Sbjct: 598 AHGLPMVATKNGGPVDIHRALHNGLLVDPHDQEAIANALLKLVSEKNLWHECRINGWKNI 657
Query: 651 HRFSWPEHCRNYLSHVEHSRNRHPNSHLEIMTIPGEP----LSDSLRDVEDFSLRFSMEG 706
H FSWPEHCR YL+ + R RHP + + + L+DSL+DV+D SLR SM+G
Sbjct: 658 HLFSWPEHCRTYLTRIAACRMRHPQWQTDADEVAAQDDEFSLNDSLKDVQDMSLRLSMDG 717
Query: 707 DF-KLNAELD 715
D LN L+
Sbjct: 718 DKPSLNGSLE 727
|
|
| TAIR|locus:2149179 SPS1F "sucrose phosphate synthase 1F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2386 (845.0 bits), Expect = 3.5e-297, Sum P(2) = 3.5e-297
Identities = 493/860 (57%), Positives = 618/860 (71%)
Query: 1 MAGNEWINGYLEAILDAGSGKTKMNDGKFKLSKFEETKQKEGQLFSPTKYFVEEVINSFD 60
MAGN+W+N YLEAILD G G ++D + S ++ G+ F+P++YFVEEVI +D
Sbjct: 1 MAGNDWVNSYLEAILDVGQG---LDDARSSPSLL---LRERGR-FTPSRYFVEEVITGYD 53
Query: 61 ESDLHRTWVKVIATRNTRERSNRLENMCWRIWHLARKKKQIAWEDAQRLAKRRLEREQGR 120
E+DLHR+WVK +ATR+ +ER+ RLENMCWRIW+LAR+KKQ ++AQRLAKRRLERE+GR
Sbjct: 54 ETDLHRSWVKAVATRSPQERNTRLENMCWRIWNLARQKKQHEEKEAQRLAKRRLEREKGR 113
Query: 121 NDAADDLSE-LSEGEKEKGDSINA----SESLK-EIPRINS--DMQIWSEDDKSSRNLYI 172
+A D+SE SEGEK GD I+ ES K +PRINS M++W+ K ++ LY+
Sbjct: 114 REATADMSEEFSEGEK--GDIISDISTHGESTKPRLPRINSAESMELWASQQKGNK-LYL 170
Query: 173 VLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSS 232
VLIS+HGL+RG+NME+GRDSDTGGQVKYVVELARAL + GVYRVDLLTRQ++SP+VD S
Sbjct: 171 VLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDYS 230
Query: 233 YGEPNEMLSCP------SDGTG-SCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNH 285
YGEP EML+ P SD G S GAYI+RIP G +DKYI KE LWP+I EFVDGA++H
Sbjct: 231 YGEPTEMLT-PRDSEDFSDEMGESSGAYIVRIPFGPKDKYIPKELLWPHIPEFVDGAMSH 289
Query: 286 IVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQL 345
I+ M+ +GEQV GKP WP IHGHYADAG+ A LSGALNVPM+LTGHSLGR+K EQL
Sbjct: 290 IMQMSNVLGEQVGVGKPIWPSAIHGHYADAGDATALLSGALNVPMLLTGHSLGRDKLEQL 349
Query: 346 LKQGRLPKD-INASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKL 404
L+QGRL K+ IN++YKIMRRIE EEL LD SEMV+TSTRQEI+ QW LYDGFD LERKL
Sbjct: 350 LRQGRLSKEEINSTYKIMRRIEGEELSLDVSEMVITSTRQEIDEQWRLYDGFDPILERKL 409
Query: 405 RVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPM 464
R R +R VSC+GRFMPRMV IPPGM+F+++ GGD ++ GN+ + + PP+
Sbjct: 410 RARIKRNVSCYGRFMPRMVKIPPGMEFNHIVPH---GGD--MEDTDGNEEHPTSPD-PPI 463
Query: 465 WSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDM 524
W+E+MRFF+N KP ILAL+RPDPKKN+TTL+KAFGEC+PLRELAN+ LI+GNRD I++M
Sbjct: 464 WAEIMRFFSNSRKPMILALARPDPKKNITTLVKAFGECRPLRELANLALIMGNRDGIDEM 523
Query: 525 SNXXXXXXXXXXKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGL 584
S+ KLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK+KGVFINPA++EPFGL
Sbjct: 524 SSTSSSVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKSKGVFINPAIIEPFGL 583
Query: 585 TIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNXXXXXXXXXXXXXNMWSECRK 644
T+IEAAA+GLP+VATKNGGPVDI + L+NGLLVDPHDQ ++W++CR+
Sbjct: 584 TLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQQSISEALLKLVADKHLWAKCRQ 643
Query: 645 NGLKNIHRFSWPEHCRNYLSHVEHSRNRHPNSHLEIMTIPGEPLS--DSLRDVEDFSL-- 700
NGLKNIH+FSWPEHC+ YLS + + RHP + EP S DSLRD++D SL
Sbjct: 644 NGLKNIHQFSWPEHCKTYLSRITSFKPRHPQWQSDDGGDNSEPESPSDSLRDIQDISLNL 703
Query: 701 RFSMEG---DFKLNAELDAVTRQKNLIEAITQKASFNGNASVTHSPGRRQMLI------- 750
+FS +G D +N E ++ R K+ IEA Q S ++ S R ++
Sbjct: 704 KFSFDGSGNDNYMNQEGSSMDR-KSKIEAAVQNWSKGKDSRKMGSLERSEVNSGKFPAVR 762
Query: 751 ---VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRC 807
I D DG +T +AT K ++ A G VGFIL T ++ E +
Sbjct: 763 RRKFIVVIALDFDGEE-DTLEAT-KRILDAVEKERAEGSVGFILSTSLTISEVQSFLVSG 820
Query: 808 TVNIEDFDAIVCNSGSELYF 827
+N DFDA +CNSGS+L++
Sbjct: 821 GLNPNDFDAFICNSGSDLHY 840
|
|
| TAIR|locus:2184891 SPS2F "sucrose phosphate synthase 2F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2325 (823.5 bits), Expect = 3.1e-241, P = 3.1e-241
Identities = 484/894 (54%), Positives = 612/894 (68%)
Query: 1 MAGNEWINGYLEAILDAGSGKTKMNDGKFKLSKFEETKQKEGQLFSPTKYFVEEVINSFD 60
M GN+W+N YLEAIL A G SK ++ G FSPT+YFVEEVI FD
Sbjct: 1 MVGNDWVNSYLEAILAAEPGIANSKPPGTGDSKSSLLLRERGH-FSPTRYFVEEVITGFD 59
Query: 61 ESDLHRTWVKVIATRNTRERSNRLENMCWRIWHLARKKKQIAWEDAQRLAKRRLEREQGR 120
E+DLHR+WV+ ATR+ +ER+ RLEN+CWRIW+LAR+KKQ+ ++A+R AKR ERE+ R
Sbjct: 60 ETDLHRSWVQAAATRSPQERNTRLENLCWRIWNLARQKKQVEGKNAKREAKREREREKAR 119
Query: 121 NDAADDLSE-LSEGEKEK--GDSINASESLKE--IPRINS-DM-QIWSEDDKSSRNLYIV 173
+ ++SE SEGEK G+ S++ + + RI+S D+ + W K + LYIV
Sbjct: 120 REVTAEMSEDFSEGEKADLPGEIPTPSDNNTKGRMSRISSVDVFENWFAQHKEKK-LYIV 178
Query: 174 LISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSY 233
LIS+HGL+RG+NME+GRDSDTGGQVKYVVELARAL + GVYRVDLLTRQ+ +P+VDSSY
Sbjct: 179 LISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVTAPDVDSSY 238
Query: 234 GEPNEMLSCPSDG-----TG-SCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIV 287
EP+EML+ P D G S GAYIIRIP G +DKY+ KE LWP+I EFVD AL+HI+
Sbjct: 239 SEPSEMLN-PIDTDIEQENGESSGAYIIRIPFGPKDKYVPKELLWPHIPEFVDRALSHIM 297
Query: 288 NMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLK 347
+++ +GEQ+ GG+ WP IHGHYADAG+ A LSGALNVPMV TGHSLGR+K EQLLK
Sbjct: 298 QISKVLGEQIGGGQQVWPVSIHGHYADAGDSTALLSGALNVPMVFTGHSLGRDKLEQLLK 357
Query: 348 QGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVR 407
QGR ++IN++YKI RRIEAEEL LDASE+V+TSTRQE++ QW LYDGFD LERKLR R
Sbjct: 358 QGRPKEEINSNYKIWRRIEAEELCLDASEIVITSTRQEVDEQWRLYDGFDPVLERKLRAR 417
Query: 408 RQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSE 467
+RGVSC GRFMPRMVVIPPGM+F ++ D D D G+D + PP+WSE
Sbjct: 418 MKRGVSCLGRFMPRMVVIPPGMEFHHIVPHDV---DAD-----GDDENPQTAD-PPIWSE 468
Query: 468 VMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNX 527
+MRFF+NP KP ILAL+RPDPKKN+ TL+KAFGEC+PLRELAN+TLI+GNR+DI+++S+
Sbjct: 469 IMRFFSNPRKPMILALARPDPKKNLVTLVKAFGECRPLRELANLTLIMGNRNDIDELSST 528
Query: 528 XXXXXXXXXKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTII 587
KLIDKYDLYGQVA PKHH+QSDVP+IYRLAAKTKGVFINPA +EPFGLT+I
Sbjct: 529 NSSVLLSILKLIDKYDLYGQVAMPKHHQQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLI 588
Query: 588 EAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNXXXXXXXXXXXXXNMWSECRKNGL 647
EA A+GLP VAT NGGPVDI + L+NGLLVDPHDQ +W CR+NGL
Sbjct: 589 EAGAHGLPTVATINGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVSDRQLWGRCRQNGL 648
Query: 648 KNIHRFSWPEHCRNYLSHVEHSRNRHPN-SHLEIMTIPGEPLSDSLRDVEDFSL--RFSM 704
NIH FSWPEHC+ YL+ + + RHP +E + SDSLRD+ D SL + S+
Sbjct: 649 NNIHLFSWPEHCKTYLARIASCKQRHPKWQRVEFENSDSDSPSDSLRDINDISLNLKLSL 708
Query: 705 EG---------DFKLNAELDAVTRQKNLIEAITQKASFNGNASVTHS--PG--RRQMLIV 751
+G D L+AE A R+ + +A++ A + S P RR+ + V
Sbjct: 709 DGEKSGSNNGVDTNLDAEDRAAERKAEVEKAVSTLAQKSKPTEKFDSKMPTLKRRKNIFV 768
Query: 752 IAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNI 811
I+ DC + T A +K V+ AAG GFIL T ++ ET A+ +
Sbjct: 769 ISVDC-----SATSDLLAVVKTVIDAAGRG---SSTGFILSTSMTISETHTALLSGGLKP 820
Query: 812 EDFDAIVCNSGSELYFPW---RDMVA-----DGDYEAHVEYRWPGENVRSVVPR 857
+DFDA++C+SGSELYF D A D DY +H+E+RW GE++R + R
Sbjct: 821 QDFDAVICSSGSELYFTSSGSEDKTALPYTLDADYHSHIEFRWGGESLRKTLIR 874
|
|
| TAIR|locus:2206865 SUS6 "sucrose synthase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 390 (142.3 bits), Expect = 2.0e-32, P = 2.0e-32
Identities = 165/649 (25%), Positives = 286/649 (44%)
Query: 172 IVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALA-------NTEGV-YRVDLLTRQ 223
+V+ S+HG G +G DTGGQV Y+++ RAL N +G+ ++ +L
Sbjct: 285 VVIFSVHGYF-GQQDVLGLP-DTGGQVVYILDQVRALEEELLIRINQQGLGFKPQILVVT 342
Query: 224 IASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPC----GARDKYIAKESLWPYIHEFV 279
PE + + E+ + +GT ++I+R+P G +++++ ++PY+ F
Sbjct: 343 RLIPEARGTKCD-QELEAI--EGTKH--SHILRVPFVTNKGVLRQWVSRFDIYPYLERFT 397
Query: 280 DGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGR 339
A + I+ KP +I G+Y D VA+ ++ L V H+L +
Sbjct: 398 QDATSKILQRLDC--------KPD---LIIGNYTDGNLVASLMATKLGVTQGTIAHALEK 446
Query: 340 NKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEI---EMQWGLYDGF 396
K+E + K+++ Y + A+ + ++ ++ ++TST QEI + + G Y+
Sbjct: 447 TKYED--SDAKW-KELDPKYHFSCQFTADLIAMNVTDFIITSTYQEIAGSKDRPGQYESH 503
Query: 397 DLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFS-YVTTQDTMGGDTDLKSLIGNDRT 455
L R G+ F P+ + PG D S Y + T I
Sbjct: 504 TAFTMPGL-CRVVSGIDVFD---PKFNIAAPGADQSVYFPYTEKDKRFTKFHPSIQELLY 559
Query: 456 QSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLIL 515
K N +E M + + KP I +++R D KN+T L++ +G+ + LRE+AN+ ++
Sbjct: 560 NEKDN-----AEHMGYLADREKPIIFSMARLDTVKNITGLVEWYGKDKRLREMANLVVVA 614
Query: 516 GNRDDIEDMSNXXXXXXXXXXKLIDKYDLYGQ----VAYPKHHKQSDVPDIYRLAAKTKG 571
G D + LI+KY L G+ A ++ S+ +YR A TKG
Sbjct: 615 GFFDMSKSNDREEKAEIKKMHDLIEKYKLKGKFRWIAAQTDRYRNSE---LYRCIADTKG 671
Query: 572 VFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPH--DQNXXXXXX 629
VF+ PAL E FGLT+IEA GLP AT GGP +I+ +G +DP+ D++
Sbjct: 672 VFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPNNGDESVTKIGD 731
Query: 630 XXXXXXXN--MWSECRKNGLKNIHR-FSWPEHCRNYLS---------HVEHSRNRHPNSH 677
+ W K GLK I+ ++W + L V + + +
Sbjct: 732 FFSKCRSDGLYWDNISKGGLKRIYECYTWKIYAEKLLKMGSLYGFWRQVNEDQKKAKKRY 791
Query: 678 LEIM-TIPGEPLSDSLRDVED--FSLRFSMEGDF--KLNAELDAVTRQKNLIEAI-TQKA 731
+E++ + + L+ + ED LR + + K L A ++QK + E T++
Sbjct: 792 IEMLYNLQFKQLTKKVTIPEDKPLPLRLASLRNLLPKKTTNLGAGSKQKEVTETEKTKQK 851
Query: 732 SFNGNASVTHSPGRRQMLI-VIAADCYDSDGNTTETFQATIK-NVMKAA 778
S +G G R++ ++AAD + E+ + K MK A
Sbjct: 852 SKDGQEQHDVKVGEREVREGLLAADASERVKKVLESSEEKQKLEKMKIA 900
|
|
| TAIR|locus:2155894 SUS2 "sucrose synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 385 (140.6 bits), Expect = 4.8e-32, P = 4.8e-32
Identities = 134/507 (26%), Positives = 234/507 (46%)
Query: 172 IVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDS 231
+V++S HG N+ +G DTGGQV Y+++ RAL N E + R+ ++ +
Sbjct: 278 VVILSPHGYFGQANV-LGLP-DTGGQVVYILDQVRALEN-EMLLRIQKQGLEVIPKILIV 334
Query: 232 SYGEPNEM-LSCPSD---GTGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIV 287
+ P +C +G+ A+I+RIP +K I ++ W I F ++
Sbjct: 335 TRLLPEAKGTTCNQRLERVSGTEHAHILRIPFRT-EKGILRK--W--ISRF--DVWPYLE 387
Query: 288 NMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLK 347
A +++ P +I G+Y+D VA+ L+ L V H+L + K+ +
Sbjct: 388 TFAEDASNEISAELQGVPNLIIGNYSDGNLVASLLASKLGVIQCNIAHALEKTKYPESDI 447
Query: 348 QGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEI---EMQWGLYDGFDLKLERKL 404
R +D Y + A+ + ++ ++ ++TST QEI + G Y+ L
Sbjct: 448 YWRNHED---KYHFSSQFTADLIAMNNADFIITSTYQEIAGSKNNVGQYESHTAFTMPGL 504
Query: 405 RVRRQRGVSCFGRFMPRMVVIPPGMDFS-YVTTQDTMGGDTDLKSLIGNDRTQSKRNLPP 463
R G+ F P+ ++ PG D + Y D T L I +++N
Sbjct: 505 -YRVVHGIDVFD---PKFNIVSPGADMTIYFPYSDKERRLTALHESIEELLFSAEQN--- 557
Query: 464 MWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIED 523
E + ++ KP I +++R D KN+T L++ + + LRELAN+ ++ G D+ +
Sbjct: 558 --DEHVGLLSDQSKPIIFSMARLDRVKNLTGLVECYAKNSKLRELANLVIVGGYIDENQS 615
Query: 524 MSNXXXXXXXXXXKLIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFINPALVEPF 582
LI++YDL+G+ + ++ ++YR A TKGVF+ PA E F
Sbjct: 616 RDREEMAEIQKMHSLIEQYDLHGEFRWIAAQMNRARNGELYRYIADTKGVFVQPAFYEAF 675
Query: 583 GLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPH--DQNXXXXXXXXXXXXXNM-- 638
GLT++E+ LP AT +GGP +I++ +G +DP+ DQ N
Sbjct: 676 GLTVVESMTCALPTFATCHGGPAEIIENGVSGFHIDPYHPDQVAATLVSFFETCNTNPNH 735
Query: 639 WSECRKNGLKNIH-RFSWPEHCRNYLS 664
W + + GLK I+ R++W ++ L+
Sbjct: 736 WVKISEGGLKRIYERYTWKKYSERLLT 762
|
|
| TAIR|locus:2166203 SUS5 "sucrose synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 358 (131.1 bits), Expect = 4.6e-29, P = 4.6e-29
Identities = 139/533 (26%), Positives = 240/533 (45%)
Query: 172 IVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALA-------NTEGV-YRVDLLTRQ 223
+V+ S+HG G +G DTGGQV Y+++ +AL N++G+ ++ +L
Sbjct: 274 VVIFSVHGYF-GQTDVLGLP-DTGGQVVYILDQVKALEDELLQRINSQGLNFKPQILVVT 331
Query: 224 IASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPC----GARDKYIAKESLWPYIHEFV 279
P D+ + N+ L P GT I+RIP G +++++ ++PY+ F
Sbjct: 332 RLIP--DAKKTKCNQELE-PIFGTKYSN--ILRIPFVTENGILRRWVSRFDIYPYLERFT 386
Query: 280 DGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGR 339
A I+++ GKP +I G+Y D VA+ ++ L + H+L +
Sbjct: 387 KDATTKILDILE--------GKPD---LIIGNYTDGNLVASLMANKLGITQATIAHALEK 435
Query: 340 NKFEQL-LKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEI---EMQWGLYDG 395
K+E +K K+ + Y + A+ + +++++ ++ ST QEI + + G Y+
Sbjct: 436 TKYEDSDIKW----KEFDPKYHFSSQFTADLISMNSADFIIASTYQEIAGSKERAGQYES 491
Query: 396 -FDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFS-YV--TTQDTMGGD--TDLKSL 449
+ RV VS F PR + PG D S Y T QD T + L
Sbjct: 492 HMSFTVPGLYRV-----VSGINVFDPRFNIAAPGADDSIYFPFTAQDRRFTKFYTSIDEL 546
Query: 450 IGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELA 509
+ +QS+ + E + + + KP I +++R D KN+T L + + + + LR+L
Sbjct: 547 L---YSQSEND------EHIGYLVDKKKPIIFSMARLDVVKNLTGLTEWYAKNKRLRDLV 597
Query: 510 NMTLILGNRDDIEDMSNXXXXXXXXXXKLIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAK 568
N+ ++ G D + LI+KY L GQ + ++ ++YR A
Sbjct: 598 NLVIVGGFFDASKSKDREEISEIKKMHSLIEKYQLKGQFRWITAQTDRTRNGELYRSIAD 657
Query: 569 TKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNXXXXX 628
T+G F+ PA E FGLT+IEA + GL AT GGP +I+ +G +DP +
Sbjct: 658 TRGAFVQPAHYEAFGLTVIEAMSCGLVTFATNQGGPAEIIVDGVSGFHIDPSNGEESSDK 717
Query: 629 XXXXXXXXNM----WSECRKNGLKNIHR-FSWPEHCRNYLSHVE-HSRNRHPN 675
M W+ GL+ I+ ++W + ++ +S RH N
Sbjct: 718 IADFFEKSGMDPDYWNMFSNEGLQRINECYTWKIYANKVINMGSTYSYWRHLN 770
|
|
| TAIR|locus:2084756 SUS4 "AT3G43190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 352 (129.0 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 134/512 (26%), Positives = 235/512 (45%)
Query: 172 IVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDS 231
+V++S HG DN+ +G DTGGQV Y+++ RAL TE + R+ I +
Sbjct: 281 VVILSPHGYFAQDNV-LGYP-DTGGQVVYILDQVRAL-ETEMLQRIKQQGLNITPRILII 337
Query: 232 SYGEPNEM-LSCPS---DGTGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIV 287
+ P+ +C GS I+R+P +K I ++ W E
Sbjct: 338 TRLLPDAAGTTCGQRLEKVYGSQYCDILRVPFRT-EKGIVRK--WISRFEVWPYLETFTE 394
Query: 288 NMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLK 347
++A I +++ G KP +I G+Y+D VA+ L+ L V H+L + K+
Sbjct: 395 DVAAEISKELQG-KPD---LIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPD--- 447
Query: 348 QGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEI---EMQWGLYDGF-DLKLERK 403
K ++ Y + A+ + ++ ++ ++TST QEI + G Y+ L
Sbjct: 448 SDIYWKKLDEKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHRSFTLPGL 507
Query: 404 LRVRRQRGVSCFGRFMPRMVVIPPGMD----FSYVTTQDTMGG-DTDLKSLIGNDRTQSK 458
RV G+ F P+ ++ PG D F+Y + + +++ L+ +D +++
Sbjct: 508 YRV--VHGIDVFD---PKFNIVSPGADMSIYFAYTEEKRRLTAFHLEIEELLYSD-VENE 561
Query: 459 RNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNR 518
+L V++ + KP I ++R D KN++ L++ +G+ LREL N+ ++ G+R
Sbjct: 562 EHLC-----VLK---DKKKPIIFTMARLDRVKNLSGLVEWYGKNTRLRELVNLVVVGGDR 613
Query: 519 DDIEDMSNXXXXXXXXXXKLIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFINPA 577
E N +LI++Y L GQ + + ++YR TKG F+ PA
Sbjct: 614 RK-ESQDNEEKAEMKKMYELIEEYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPA 672
Query: 578 LVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNXXXXXXXXXXXXX- 636
L E FGLT++EA GLP AT NGGP +I+ +G +DP+ +
Sbjct: 673 LYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDKAAESLADFFTKCK 732
Query: 637 ---NMWSECRKNGLKNIH-RFSWPEHCRNYLS 664
+ W + GL+ I +++W + + L+
Sbjct: 733 HDPSHWDQISLGGLERIQEKYTWQIYSQRLLT 764
|
|
| TAIR|locus:2137829 SUS3 "AT4G02280" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 349 (127.9 bits), Expect = 4.1e-28, P = 4.1e-28
Identities = 129/500 (25%), Positives = 229/500 (45%)
Query: 172 IVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDS 231
+V++S HG N+ +G DTGGQV Y+++ RAL TE + R+ I+ +
Sbjct: 281 VVILSPHGYFGQANV-LGLP-DTGGQVVYILDQVRAL-ETEMLLRIKRQGLDISPSILIV 337
Query: 232 SYGEPNEM-LSCPSD---GTGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIV 287
+ P+ +C +G+ +I+R+P + +K I ++ W I F ++
Sbjct: 338 TRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRS-EKGILRK--W--ISRF--DVWPYLE 390
Query: 288 NMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLK 347
N A+ ++ G P I G+Y+D VA+ ++ + V H+L + K+
Sbjct: 391 NYAQDAASEIVGELQGVPDFIIGNYSDGNLVASLMAHRMGVTQCTIAHALEKTKYPD--- 447
Query: 348 QGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEI---EMQWGLYDGFD-LKLERK 403
KD + Y + A+ + ++ ++ ++TST QEI + G Y+ L
Sbjct: 448 SDIYWKDFDNKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHGAFTLPGL 507
Query: 404 LRVRRQRGVSCFGRFMPRMVVIPPGMDFS--YVTTQDTMGGDTDLKSLIGNDRTQSKRNL 461
RV G+ F P+ ++ PG D + + +++T L +L G+ +
Sbjct: 508 YRV--VHGIDVFD---PKFNIVSPGADMTIYFPYSEETRR----LTALHGS--IEEMLYS 556
Query: 462 PPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDI 521
P E + ++ KP + +++R D KN++ L++ + + LREL N+ +I GN D
Sbjct: 557 PDQTDEHVGTLSDRSKPILFSMARLDKVKNISGLVEMYSKNTKLRELVNLVVIAGNIDVN 616
Query: 522 EDMSNXXXXXXXXXXKLIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFINPALVE 580
+ L+ Y L GQ + ++ ++YR A T+G F PA E
Sbjct: 617 KSKDREEIVEIEKMHNLMKNYKLDGQFRWITAQTNRARNGELYRYIADTRGAFAQPAFYE 676
Query: 581 PFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPH--DQ--NXXXXXXXXXXXXX 636
FGLT++EA GLP AT +GGP +I++ +G +DP+ +Q N
Sbjct: 677 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGLSGFHIDPYHPEQAGNIMADFFERCKEDP 736
Query: 637 NMWSECRKNGLKNIH-RFSW 655
N W + GL+ I+ R++W
Sbjct: 737 NHWKKVSDAGLQRIYERYTW 756
|
|
| TAIR|locus:2180489 SUS1 "AT5G20830" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 347 (127.2 bits), Expect = 6.7e-28, P = 6.7e-28
Identities = 135/512 (26%), Positives = 236/512 (46%)
Query: 172 IVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDS 231
+V++S HG DN+ +G DTGGQV Y+++ RAL E + R+ I +
Sbjct: 281 VVILSPHGYFAQDNV-LGYP-DTGGQVVYILDQVRAL-EIEMLQRIKQQGLNIKPRILIL 337
Query: 232 SYGEPNEMLSCPSDGTGSC--GAY--IIRIPCGARDKYIAKESLWPYIHEFVDGALNHIV 287
+ P+ + + + Y I+R+P +K I ++ W E +
Sbjct: 338 TRLLPDAVGTTCGERLERVYDSEYCDILRVPFRT-EKGIVRK--WISRFEVWPYLETYTE 394
Query: 288 NMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLK 347
+ A + +++NG KP +I G+Y+D VA+ L+ L V H+L + K+
Sbjct: 395 DAAVELSKELNG-KPD---LIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPD--- 447
Query: 348 QGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEI---EMQWGLYDGFD-LKLERK 403
K ++ Y + A+ ++ ++ ++TST QEI + G Y+ L
Sbjct: 448 SDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGL 507
Query: 404 LRVRRQRGVSCFGRFMPRMVVIPPGMD----FSYVTTQDTMGG-DTDLKSLIGNDRTQSK 458
RV G+ F P+ ++ PG D F Y + + ++++ L+ +D ++K
Sbjct: 508 YRV--VHGIDVFD---PKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSD-VENK 561
Query: 459 RNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNR 518
+L V++ + KP + ++R D KN++ L++ +G+ LRELAN+ ++ G+R
Sbjct: 562 EHLC-----VLK---DKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDR 613
Query: 519 DDIEDMSNXXXXXXXXXXKLIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFINPA 577
E N LI++Y L GQ + + ++YR TKG F+ PA
Sbjct: 614 RK-ESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPA 672
Query: 578 LVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPH--DQ--NXXXXXXXXXX 633
L E FGLT++EA GLP AT GGP +I+ +G +DP+ DQ +
Sbjct: 673 LYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCK 732
Query: 634 XXXNMWSECRKNGLKNIH-RFSWPEHCRNYLS 664
+ W E K GL+ I +++W + + L+
Sbjct: 733 EDPSHWDEISKGGLQRIEEKYTWQIYSQRLLT 764
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| F4JLK2 | SPSA4_ARATH | 2, ., 4, ., 1, ., 1, 4 | 0.72 | 1.0 | 0.9752 | yes | no |
| Q43876 | SPSA_VICFA | 2, ., 4, ., 1, ., 1, 4 | 0.5406 | 0.9697 | 0.9376 | N/A | no |
| P31927 | SPSA_MAIZE | 2, ., 4, ., 1, ., 1, 4 | 0.5680 | 0.9931 | 0.9522 | N/A | no |
| P31928 | SPSA_SPIOL | 2, ., 4, ., 1, ., 1, 4 | 0.5442 | 0.9824 | 0.9526 | N/A | no |
| Q6ZHZ1 | SPSA4_ORYSJ | 2, ., 4, ., 1, ., 1, 4 | 0.5360 | 0.9785 | 0.9399 | yes | no |
| P49031 | SPSA_BETVU | 2, ., 4, ., 1, ., 1, 4 | 0.5483 | 0.9746 | 0.9550 | N/A | no |
| Q43845 | SPSA_SOLTU | 2, ., 4, ., 1, ., 1, 4 | 0.5479 | 0.9746 | 0.9477 | N/A | no |
| Q0JGK4 | SPSA1_ORYSJ | 2, ., 4, ., 1, ., 1, 4 | 0.5594 | 0.9892 | 0.9345 | yes | no |
| A2WYE9 | SPSA1_ORYSI | 2, ., 4, ., 1, ., 1, 4 | 0.5594 | 0.9892 | 0.9345 | N/A | no |
| O22060 | SPSA1_CITUN | 2, ., 4, ., 1, ., 1, 4 | 0.5560 | 0.9746 | 0.9441 | N/A | no |
| O04933 | SPSA2_CRAPL | 2, ., 4, ., 1, ., 1, 4 | 0.5761 | 0.9902 | 0.9380 | N/A | no |
| O04932 | SPSA1_CRAPL | 2, ., 4, ., 1, ., 1, 4 | 0.5396 | 0.9716 | 0.9440 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| gw1.XIII.3112.1 | hypothetical protein (1020 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| eugene3.00440147 | sucrose synthase (EC-2.4.1.13) (815 aa) | • | • | • | 0.915 | ||||||
| PtrSuSY2 | sucrose synthase (EC-2.4.1.13) (803 aa) | • | • | • | 0.914 | ||||||
| PtrSuSY1 | sucrose synthase (EC-2.4.1.13) (805 aa) | • | • | • | 0.914 | ||||||
| estExt_Genewise1_v1.C_1220111 | sucrose synthase (EC-2.4.1.13) (801 aa) | • | • | • | 0.914 | ||||||
| estExt_fgenesh4_pm.C_LG_II0867 | sucrose synthase (EC-2.4.1.13) (812 aa) | • | • | • | 0.914 | ||||||
| gw1.XIII.2344.1 | hypothetical protein (409 aa) | • | 0.899 | ||||||||
| gw1.IV.2527.1 | trehalose-6-phosphate synthase (769 aa) | • | 0.899 | ||||||||
| gw1.5051.2.1 | hypothetical protein (250 aa) | • | 0.899 | ||||||||
| fgenesh4_pg.C_scaffold_9882000001 | annotation not avaliable (198 aa) | • | 0.899 | ||||||||
| fgenesh4_pg.C_LG_III000738 | hypothetical protein (861 aa) | • | 0.899 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1024 | |||
| TIGR02468 | 1050 | TIGR02468, sucrsPsyn_pln, sucrose phosphate syntha | 0.0 | |
| TIGR02472 | 439 | TIGR02472, sucr_P_syn_N, sucrose-phosphate synthas | 1e-177 | |
| cd03800 | 398 | cd03800, GT1_Sucrose_synthase, This family is most | 1e-149 | |
| TIGR02470 | 784 | TIGR02470, sucr_synth, sucrose synthase | 5e-49 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 8e-36 | |
| PLN00142 | 815 | PLN00142, PLN00142, sucrose synthase | 3e-35 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 3e-27 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 4e-27 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 6e-27 | |
| cd03809 | 365 | cd03809, GT1_mtfB_like, This family is most closel | 1e-24 | |
| cd03814 | 364 | cd03814, GT1_like_2, This family is most closely r | 5e-20 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 1e-19 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 1e-19 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 2e-18 | |
| TIGR02471 | 236 | TIGR02471, sucr_syn_bact_C, sucrose phosphate synt | 2e-18 | |
| cd03821 | 375 | cd03821, GT1_Bme6_like, This family is most closel | 5e-18 | |
| pfam05116 | 247 | pfam05116, S6PP, Sucrose-6F-phosphate phosphohydro | 1e-17 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 2e-17 | |
| cd03807 | 365 | cd03807, GT1_WbnK_like, This family is most closel | 1e-16 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 1e-15 | |
| cd04949 | 372 | cd04949, GT1_gtfA_like, This family is most closel | 1e-15 | |
| TIGR03449 | 405 | TIGR03449, mycothiol_MshA, D-inositol-3-phosphate | 1e-13 | |
| cd03825 | 365 | cd03825, GT1_wcfI_like, This family is most closel | 5e-13 | |
| cd04962 | 371 | cd04962, GT1_like_5, This family is most closely r | 1e-12 | |
| cd03823 | 359 | cd03823, GT1_ExpE7_like, This family is most close | 5e-12 | |
| TIGR03088 | 374 | TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH | 1e-11 | |
| cd03819 | 355 | cd03819, GT1_WavL_like, This family is most closel | 2e-11 | |
| TIGR03999 | 374 | TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin | 1e-10 | |
| cd03799 | 355 | cd03799, GT1_amsK_like, This is a family of GT1 gl | 2e-10 | |
| cd04951 | 360 | cd04951, GT1_WbdM_like, This family is most closel | 2e-10 | |
| cd03822 | 366 | cd03822, GT1_ecORF704_like, This family is most cl | 3e-10 | |
| cd05844 | 367 | cd05844, GT1_like_7, Glycosyltransferases catalyze | 3e-10 | |
| cd03813 | 475 | cd03813, GT1_like_3, This family is most closely r | 4e-10 | |
| pfam00862 | 550 | pfam00862, Sucrose_synth, Sucrose synthase | 4e-09 | |
| cd03791 | 476 | cd03791, GT1_Glycogen_synthase_DULL1_like, This fa | 5e-09 | |
| cd03795 | 357 | cd03795, GT1_like_4, This family is most closely r | 6e-09 | |
| cd03794 | 394 | cd03794, GT1_wbuB_like, This family is most closel | 7e-09 | |
| TIGR02149 | 388 | TIGR02149, glgA_Coryne, glycogen synthase, Coryneb | 3e-08 | |
| cd03796 | 398 | cd03796, GT1_PIG-A_like, This family is most close | 1e-07 | |
| TIGR04047 | 373 | TIGR04047, MSMEG_0565_glyc, glycosyltransferase, M | 2e-07 | |
| cd03804 | 351 | cd03804, GT1_wbaZ_like, This family is most closel | 4e-07 | |
| cd03805 | 392 | cd03805, GT1_ALG2_like, This family is most closel | 1e-06 | |
| cd03792 | 372 | cd03792, GT1_Trehalose_phosphorylase, Trehalose ph | 1e-06 | |
| PRK15484 | 380 | PRK15484, PRK15484, lipopolysaccharide 1,2-N-acety | 1e-06 | |
| PLN02871 | 465 | PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu | 3e-06 | |
| cd03802 | 335 | cd03802, GT1_AviGT4_like, This family is most clos | 5e-06 | |
| pfam13692 | 134 | pfam13692, Glyco_trans_1_4, Glycosyl transferases | 7e-06 | |
| cd04946 | 407 | cd04946, GT1_AmsK_like, This family is most closel | 9e-06 | |
| TIGR04157 | 406 | TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG | 2e-05 | |
| COG0297 | 487 | COG0297, GlgA, Glycogen synthase [Carbohydrate tra | 2e-05 | |
| TIGR02095 | 473 | TIGR02095, glgA, glycogen/starch synthase, ADP-glu | 3e-05 | |
| TIGR04063 | 397 | TIGR04063, stp3, PEP-CTERM/exosortase A-associated | 5e-05 | |
| pfam13579 | 158 | pfam13579, Glyco_trans_4_4, Glycosyl transferase 4 | 2e-04 | |
| cd03812 | 358 | cd03812, GT1_CapH_like, This family is most closel | 0.001 | |
| PRK15427 | 406 | PRK15427, PRK15427, colanic acid biosynthesis glyc | 0.001 | |
| TIGR01485 | 249 | TIGR01485, SPP_plant-cyano, sucrose-6F-phosphate p | 0.002 |
| >gnl|CDD|233879 TIGR02468, sucrsPsyn_pln, sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Score = 1570 bits (4067), Expect = 0.0
Identities = 627/1070 (58%), Positives = 756/1070 (70%), Gaps = 70/1070 (6%)
Query: 1 MAGNEWINGYLEAILDAGSGKTKMNDGKFKLSKFEETKQKEGQLFSPTKYFVEEVINSFD 60
MAGN+WIN YLEAILD G G L +E FSPT+YFVEEVI FD
Sbjct: 1 MAGNDWINSYLEAILDVGPGLDDAKSSALLL-------LRERGRFSPTRYFVEEVITGFD 53
Query: 61 ESDLHRTWVKVIATRNTRERSNRLENMCWRIWHLARKKKQIAWEDAQRLAKRRLEREQGR 120
E+DLHRTWVK +ATR+ +ER+ RLENMCWRIW+LARKKKQ+ WE+AQRLAKRRLERE+GR
Sbjct: 54 ETDLHRTWVKAVATRSPQERNTRLENMCWRIWNLARKKKQLEWEEAQRLAKRRLERERGR 113
Query: 121 NDAADDLSE-LSEGEKEK--GDSINASES---LKEIPRINSD--MQIWSEDDKSSRNLYI 172
+A D+SE LSEGEK GD A +PRI+S+ M+ WS+ K + LYI
Sbjct: 114 REATADMSEDLSEGEKGDVAGDISVAGGEPSTKGRLPRISSNLEMETWSDQQKE-KKLYI 172
Query: 173 VLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSS 232
VLIS+HGLVRG+NME+GRDSDTGGQVKYVVELARAL + GVYRVDLLTRQ++SP+VD S
Sbjct: 173 VLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWS 232
Query: 233 YGEPNEMLS-----CPSDGTG-SCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHI 286
YGEP EML+ D G S GAYIIRIP G RDKYI KE LWPYI EFVDGAL+HI
Sbjct: 233 YGEPTEMLTPRSSENDGDEMGESSGAYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHI 292
Query: 287 VNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLL 346
VNM++ +GEQ+ G P WPYVIHGHYADAG+ AA LSGALNVPMVLTGHSLGR+K EQLL
Sbjct: 293 VNMSKVLGEQIGSGHPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLL 352
Query: 347 KQGRLPK-DINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLR 405
KQGR+ K +IN++YKIMRRIEAEEL LDASE+V+TSTRQEIE QWGLYDGFD+ LERKLR
Sbjct: 353 KQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGLYDGFDVILERKLR 412
Query: 406 VRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMW 465
R +RGVSC+GRFMPRM VIPPGM+FS++ D D+ + + PP+W
Sbjct: 413 ARARRGVSCYGRFMPRMAVIPPGMEFSHIVP-----HDGDMDGETEGNEEHPAKPDPPIW 467
Query: 466 SEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMS 525
SE+MRFFTNP KP ILAL+RPDPKKN+TTL+KAFGEC+PLRELAN+TLI+GNRDDI++MS
Sbjct: 468 SEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMS 527
Query: 526 NSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLT 585
+ SS VLT+VLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPA +EPFGLT
Sbjct: 528 SGSSSVLTSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLT 587
Query: 586 IIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKN 645
+IEAAA+GLP+VATKNGGPVDI + L+NGLLVDPHDQ AIADALLKL+ADK +W+ECR+N
Sbjct: 588 LIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQLWAECRQN 647
Query: 646 GLKNIHRFSWPEHCRNYLSHVEHSRNRHPNSHLEIMTIPGEP------LSDSLRDVEDFS 699
GLKNIH FSWPEHC+ YLS + R RHP T GE DSLRD++D S
Sbjct: 648 GLKNIHLFSWPEHCKTYLSRIASCRPRHPQ-WQRD-TDDGEEASEDESPGDSLRDIQDIS 705
Query: 700 LRFSMEGDFKLNAE-----------------LDAVTRQKNLIEAITQKASFNGNASVTHS 742
L S++GD + N +AV + + KA A +
Sbjct: 706 LNLSVDGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPKGSSAKAQQGSGAGKYPA 765
Query: 743 PGRRQMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETME 802
RR+ L VIA DCYD Q IKN+ +A G GFIL T ++ E
Sbjct: 766 LRRRKRLFVIAVDCYDDKD----LLQI-IKNIFEAVRKERMEGSSGFILSTSMTISEIQS 820
Query: 803 AIRRCTVNIEDFDAIVCNSGSELYFP------WRDMVADGDYEAHVEYRWPGENVRSVVP 856
++ +N DFDA++CNSGSELY+P +VAD DY +H+EYRW GE +R +
Sbjct: 821 FLKSGGLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLV 880
Query: 857 RVA-----RAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLV 911
+ A + + E + ++S+ C ++ +K ++ V +R+ LR++G RC+ V
Sbjct: 881 KWAASINEKKGENEEQIVEEDEESSTDHCYAFKVKDPSKVPPVKELRKLLRIQGLRCHAV 940
Query: 912 YTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLIL 971
Y R G+RLNV+P ASR QALRYL +RWGI+L+ M VFVGE GDTDYE LL GLHKT+IL
Sbjct: 941 YCRNGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVIL 1000
Query: 972 RGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAI 1021
+G V GSE+ LH ++ +DVVP DSPNI D+S ALK +
Sbjct: 1001 KGVVSRGSEQ-LHANRSYPLDDVVPLDSPNIVQATGGSSSDDISDALKKL 1049
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. Length = 1050 |
| >gnl|CDD|131525 TIGR02472, sucr_P_syn_N, sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Score = 523 bits (1348), Expect = e-177
Identities = 226/502 (45%), Positives = 300/502 (59%), Gaps = 67/502 (13%)
Query: 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEV 229
LY++L+S+HGL+RG ++E+GRD+DTGGQ KYV+ELARALA V +VDL+TR I +V
Sbjct: 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKV 60
Query: 230 DSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNM 289
Y +P E ++ P GA I+R+P G R +Y+ KE LWPY+ E D L H+
Sbjct: 61 SPDYAQPIERIA-P-------GARIVRLPFGPR-RYLRKELLWPYLDELADNLLQHL--- 108
Query: 290 ARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQG 349
+ G P IH HYADAG V A LS L VP++ TGHSLGR K +LL G
Sbjct: 109 ------RQQGHLPDL---IHAHYADAGYVGARLSRLLGVPLIFTGHSLGREKRRRLLAAG 159
Query: 350 RLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409
P+ I Y I RRIEAEE L + +V+TST QEIE Q+ LYD + +
Sbjct: 160 LKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQPE---------- 209
Query: 410 RGVSCFGRFMPRMVVIPPGMD---FSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWS 466
RM VIPPG+D F QS + +
Sbjct: 210 -----------RMQVIPPGVDLSRFYPP---------------------QSSEETSEIDN 237
Query: 467 EVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSN 526
+ F +P KP ILA+SRPD +KN+ +L++A+G L+E+AN+ L+LG RDDI M +
Sbjct: 238 LLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMES 297
Query: 527 SSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTI 586
VL VL LID+YDLYG+VAYPKHH+ DVP++YRLAA+++G+F+NPAL EPFGLT+
Sbjct: 298 QQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTL 357
Query: 587 IEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNG 646
+EAAA GLP+VAT +GGP DI+ NGLLVD D AIA AL L+D + W +NG
Sbjct: 358 LEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSDSSQWQLWSRNG 417
Query: 647 LKNIHR-FSWPEHCRNYLSHVE 667
++ + R +SW H YL ++
Sbjct: 418 IEGVRRHYSWDAHVEKYLRILQ 439
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. Length = 439 |
| >gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 448 bits (1156), Expect = e-149
Identities = 170/495 (34%), Positives = 227/495 (45%), Gaps = 98/495 (19%)
Query: 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVD 230
I LIS+HG +DTGGQ YV+ELARALA + VD+ TR+I
Sbjct: 1 RIALISLHGSPLAQPGG----ADTGGQNVYVLELARALA--RLGHEVDIFTRRIDDALPP 54
Query: 231 SSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMA 290
P ++R+P G +Y+ KE LWPY+ EF D L +
Sbjct: 55 IVELAPG--------------VRVVRVPAGPA-EYLPKEELWPYLDEFADDLLRFL---- 95
Query: 291 RAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGR 350
+ P +IH HY D+G VA L+ L +P+V T HSLG K L
Sbjct: 96 --------RREGGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHSLGAVKRRHLGAADT 147
Query: 351 LPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQR 410
Y+ RRIEAEE L A++ V+ ST QE E + LY +
Sbjct: 148 --------YEPARRIEAEERLLRAADRVIASTPQEAEELYSLYGAYP------------- 186
Query: 411 GVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMR 470
R+ V+PPG+D T R +++R R
Sbjct: 187 ---------RRIRVVPPGVDLERFTPYG---------------RAEARR---------AR 213
Query: 471 FFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSV 530
+P KP ILA+ R DP+K + TL++A+ E LRE AN+ ++ G RDDI M
Sbjct: 214 LLRDPDKPRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELR 273
Query: 531 VLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAA 590
L L +ID+ D +P + D+P +YR A VF+NPAL EPFGLT +EA
Sbjct: 274 ELARELGVIDRVD------FPGRVSREDLPALYRAA----DVFVNPALYEPFGLTALEAM 323
Query: 591 AYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNI 650
A GLPVVAT GGP DI+ GLLVDP D A+A AL +LL D + + GL+
Sbjct: 324 ACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRAGLRRA 383
Query: 651 H-RFSWPEHCRNYLS 664
R++W L
Sbjct: 384 RARYTWERVAARLLE 398
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398 |
| >gnl|CDD|233881 TIGR02470, sucr_synth, sucrose synthase | Back alignment and domain information |
|---|
Score = 187 bits (476), Expect = 5e-49
Identities = 141/537 (26%), Positives = 249/537 (46%), Gaps = 95/537 (17%)
Query: 172 IVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANT-------EGVY---RVDLLT 221
+V++S HG +N+ +G DTGGQV Y+++ RAL N +G+ ++ ++T
Sbjct: 258 VVILSPHGYFGQENV-LGLP-DTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVT 315
Query: 222 RQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARD-----KYIAKESLWPYIH 276
R I P+ + + N+ L GT A+I+R+P + +I++ +WPY+
Sbjct: 316 RLI--PDAEGTTC--NQRLE-KVYGTEH--AWILRVPFRTENGIILRNWISRFEIWPYLE 368
Query: 277 EFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHS 336
F + A I +A GKP +I G+Y+D VA+ L+ L V H+
Sbjct: 369 TFAEDAEKEI--LAEL------QGKPD---LIIGNYSDGNLVASLLARKLGVTQCTIAHA 417
Query: 337 LGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEI------EMQW 390
L + K+ ++ Y + A+ + ++A++ ++TST QEI Q+
Sbjct: 418 LEKTKY---PDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQY 474
Query: 391 ---------GLY---DGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMD----FSYV 434
GLY G D+ F P+ ++ PG D F Y
Sbjct: 475 ESHQAFTMPGLYRVVHGIDV-------------------FDPKFNIVSPGADESIYFPYS 515
Query: 435 TTQDTMGGD-TDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVT 493
+ + +++ L+ + E + +P+KP I +++R D KN+T
Sbjct: 516 DKEKRLTNLHPEIEELLFSLEDND---------EHYGYLKDPNKPIIFSMARLDRVKNLT 566
Query: 494 TLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKH 553
L++ +G LREL N+ ++ G D E + + LID+Y L+GQ+ +
Sbjct: 567 GLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGA 626
Query: 554 H-KQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALN 612
+ ++YR A TKG+F+ PAL E FGLT++EA GLP AT+ GGP++I++
Sbjct: 627 QLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGV 686
Query: 613 NGLLVDPHDQNAIADALL----KLLADKNMWSECRKNGLKNIH-RFSWPEHCRNYLS 664
+G +DP+ A+ ++ K D + W + + GL+ I+ +++W + L+
Sbjct: 687 SGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLT 743
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 784 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 139 bits (353), Expect = 8e-36
Identities = 108/477 (22%), Positives = 168/477 (35%), Gaps = 120/477 (25%)
Query: 195 GGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYI 254
GG ++V+ELARALA G + V +LT G P+E
Sbjct: 14 GGAERHVLELARALAA-RG-HEVTVLTPG--------DGGLPDEEE-------------- 49
Query: 255 IRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYAD 314
+ L + L + V+H H
Sbjct: 50 -----VGGIVVVRPPPLLRVRRLLLLLLLALRLRRLLRRER---------FDVVHAHDWL 95
Query: 315 AGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDA 374
A AA + L +P+VLT H L GR ++ K+ R +E A
Sbjct: 96 ALLAAALAARLLGIPLVLTVHGLEF---------GRPGNELGLLLKLARALERR-ALRRA 145
Query: 375 SEMVVTS--TRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFS 432
++ S TR+E+ G ++ VIP G+D
Sbjct: 146 DRIIAVSEATREEL-------------------------RELGGVPPEKITVIPNGVDTE 180
Query: 433 YVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNV 492
R P + R +P IL + R P+K V
Sbjct: 181 --------------------------RFRPAPRAARRRLGIPEDEPVILFVGRLVPRKGV 214
Query: 493 TTLLKAFGECQPLRELANMTLIL-GNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYP 551
LL+A + +E ++ L++ G+ E++ L + L +V +
Sbjct: 215 DLLLEALAKL--RKEYPDVRLVIVGDGPLREEL-----------EALAAELGLGDRVTFL 261
Query: 552 KHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKAL 611
D+P +Y A VF+ P+L E FGL ++EA A GLPVVA+ GG ++++
Sbjct: 262 GFVPDEDLPALYAAAD----VFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDG 317
Query: 612 NNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYLSHVE 667
GLLV P D A+A+A+L+LL D + + + + RFSW
Sbjct: 318 ETGLLVPPGDPEALAEAILRLLDDPELRRRLGEAARERVAERFSWDRVAARTEEVYY 374
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|215073 PLN00142, PLN00142, sucrose synthase | Back alignment and domain information |
|---|
Score = 144 bits (365), Expect = 3e-35
Identities = 150/532 (28%), Positives = 243/532 (45%), Gaps = 104/532 (19%)
Query: 172 IVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDL-----------L 220
+V+ S HG N+ +G DTGGQV Y+++ RAL N E + R+ +
Sbjct: 282 VVIFSPHGYFGQANV-LGL-PDTGGQVVYILDQVRALEN-EMLLRIKQQGLDIKPQILIV 338
Query: 221 TRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPC----GARDKYIAKESLWPYIH 276
TR I P+ + N+ L GT +I+R+P G K+I++ +WPY+
Sbjct: 339 TRLI--PDAKGT--TCNQRLE-KVSGTEHS--HILRVPFRTEKGILRKWISRFDVWPYLE 391
Query: 277 EFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHS 336
F + A + I+ GKP +I G+Y+D VA+ L+ L V H+
Sbjct: 392 TFAEDAASEILAEL--------QGKPD---LIIGNYSDGNLVASLLAHKLGVTQCTIAHA 440
Query: 337 LGRNKFEQL-LKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEM------Q 389
L + K+ + K + Y + A+ + ++ ++ ++TST QEI Q
Sbjct: 441 LEKTKYPDSDIYW----KKFDDKYHFSCQFTADLIAMNHADFIITSTYQEIAGSKDTVGQ 496
Query: 390 W---------GLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMD----FSYVTT 436
+ GLY R V F P+ ++ PG D F Y
Sbjct: 497 YESHTAFTLPGLY----------------RVVHGIDVFDPKFNIVSPGADMSIYFPYTEK 540
Query: 437 QDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLL 496
Q + T L I ++N E + + + KP I +++R D KN+T L+
Sbjct: 541 QKRL---TSLHPSIEELLYSPEQN-----DEHIGYLKDRKKPIIFSMARLDRVKNLTGLV 592
Query: 497 KAFGECQPLRELANMTLILGNRD-----DIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYP 551
+ +G+ + LREL N+ ++ G D D E+++ + + LI+KY+L GQ +
Sbjct: 593 EWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAE-----IKKMHSLIEKYNLKGQFRWI 647
Query: 552 KHHKQSDVP---DIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDIL 608
Q++ ++YR A TKG F+ PAL E FGLT++EA GLP AT GGP +I+
Sbjct: 648 A--AQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEII 705
Query: 609 KALNNGLLVDPH--DQ--NAIADALLKLLADKNMWSECRKNGLKNIH-RFSW 655
+G +DP+ D+ N IAD K D + W++ GL+ I+ ++W
Sbjct: 706 VDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTW 757
|
Length = 815 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 114 bits (286), Expect = 3e-27
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 16/201 (7%)
Query: 474 NPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLT 533
K +L + R DP+K + L++A + + + ++ + E++
Sbjct: 196 EGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPERREEL--------- 246
Query: 534 TVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYG 593
KL K L V + + ++ ++ A VF+ P+L E FGL ++EA A G
Sbjct: 247 --EKLAKKLGLEDNVKFLGYVPDEELAELLASAD----VFVLPSLSEGFGLVLLEAMAAG 300
Query: 594 LPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNI-HR 652
PV+A+ GG ++++ GLLV P D +ADAL +LL D + E + + +
Sbjct: 301 TPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDPELREELGEAARERVEEE 360
Query: 653 FSWPEHCRNYLSHVEHSRNRH 673
FSW L E
Sbjct: 361 FSWERIAEQLLELYEELLAEK 381
|
Length = 381 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 4e-27
Identities = 91/369 (24%), Positives = 138/369 (37%), Gaps = 101/369 (27%)
Query: 307 VIHGHYA-DAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRI 365
+IH H+A G AA L L +P+V+T H D+N +
Sbjct: 96 LIHAHFAYPDGFAAALLKRKLGIPLVVTLHGS----------------DVNLLPRKRLLR 139
Query: 366 EAEELGLDASEMVVT---STRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRM 422
L ++ V+ + E+ + L + ++ +
Sbjct: 140 ALLRRALRRADAVIAVSEALADEL---------------KALGIDPEK-----------V 173
Query: 423 VVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILA 482
VIP G+D R P +E + K IL
Sbjct: 174 TVIPNGVDTE--------------------------RFSPADRAEARKLGLPEDKKVILF 207
Query: 483 LSRPDPKKNVTTLLKAFGECQPLRELANMT--LILGN---RDDIEDMSNSSSVVLTTVLK 537
+ R P+K + L++A L + +I+G+ R+ +E ++ L
Sbjct: 208 VGRLVPRKGIDYLIEALAR---LLKKRPDVHLVIVGDGPLREALEALAAE--------LG 256
Query: 538 LIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVV 597
L D+ G V +VP Y A VF+ P+L E FGL ++EA A GLPVV
Sbjct: 257 LEDRVTFLGAVP------HEEVPAYYAAA----DVFVLPSLREGFGLVLLEAMACGLPVV 306
Query: 598 ATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKN-IHRFSWP 656
AT GG +I+ NGLLV P D A+A+A+L+LLAD W + + RFSW
Sbjct: 307 ATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADP--WLRLGRAARRRVAERFSWE 364
Query: 657 EHCRNYLSH 665
L
Sbjct: 365 NVAERLLEL 373
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 6e-27
Identities = 58/172 (33%), Positives = 88/172 (51%), Gaps = 16/172 (9%)
Query: 477 KPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVL 536
KP IL + R P+K + LL+AF + N+ L++ + E +
Sbjct: 2 KPIILFVGRLVPEKGLDLLLEAFA--LLKEQHPNLKLVIVGDGEEEK----------KLK 49
Query: 537 KLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPV 596
KL K L V + D+ ++YR+A +F+ P+ E FGL ++EA A G+PV
Sbjct: 50 KLALKLGLEDNVIFVGFVPDEDLIELYRIA----DLFVLPSRYEGFGLVLLEAMAAGVPV 105
Query: 597 VATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLK 648
+AT GGP +I+K GLLVDP D A+A+A+ KLL D+ + +N K
Sbjct: 106 IATDVGGPAEIVKDGETGLLVDPGDAEALAEAIEKLLKDEELRERLGENARK 157
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 1e-24
Identities = 65/255 (25%), Positives = 107/255 (41%), Gaps = 55/255 (21%)
Query: 415 FGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTN 474
G ++VVIP G+D + PP +EV+R
Sbjct: 159 LGVPPDKIVVIPLGVDPRFRP--------------------------PPAEAEVLRALYL 192
Query: 475 PHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLIL-GNRDDIEDMSNSSSVVLT 533
+P L + +P+KN+ LL+AF + + + L++ G R + +
Sbjct: 193 LPRPYFLYVGTIEPRKNLERLLEAF--ARLPAKGPDPKLVIVGKRGWLNE---------- 240
Query: 534 TVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYG 593
+L + + L +V + + ++ +YR A F+ P+L E FGL ++EA A G
Sbjct: 241 ELLARLRELGLGDRVRFLGYVSDEELAALYRGAR----AFVFPSLYEGFGLPVLEAMACG 296
Query: 594 LPVVATKNGGPVDILKAL-----NNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLK 648
PV+A+ +L + L DP D A+A A+ +LL D + E R+ GL
Sbjct: 297 TPVIASNIS-------SLPEVAGDAALYFDPLDPEALAAAIERLLEDPALREELRERGLA 349
Query: 649 NIHRFSWPEHCRNYL 663
RFSW + R L
Sbjct: 350 RAKRFSWEKTARRTL 364
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365 |
| >gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 92.7 bits (231), Expect = 5e-20
Identities = 63/195 (32%), Positives = 84/195 (43%), Gaps = 31/195 (15%)
Query: 475 PHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLIL-G---NRDDIEDMSNSSSV 530
P +P +L + R P+KN+ LL A PLR + L++ G R +E + +V
Sbjct: 195 PDRPVLLYVGRLAPEKNLEALLDAD---LPLRRRPPVRLVIVGDGPARARLE--ARYPNV 249
Query: 531 VLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAA 590
L D +L + +DV F+ P+ E FGL ++EA
Sbjct: 250 HFLGFL---DGEEL------AAAYASADV-------------FVFPSRTETFGLVVLEAM 287
Query: 591 AYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNI 650
A GLPVVA GGP DI+ NGLLV+P D A A AL LLAD +
Sbjct: 288 ASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADPELRRRMAARARAEA 347
Query: 651 HRFSWPEHCRNYLSH 665
R SW N L
Sbjct: 348 ERRSWEAFLDNLLEA 362
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 91.5 bits (228), Expect = 1e-19
Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 21/186 (11%)
Query: 473 TNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVV 531
++ ILA+ R P+K L++A+ + ++ + L I+G+ + E +
Sbjct: 174 SDLKSKRILAVGRLVPQKGFDLLIEAWAKIA--KKHPDWKLRIVGDGPEREAL------- 224
Query: 532 LTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAA 591
LI + L +V ++ + Y A+ +F+ + E F + ++EA A
Sbjct: 225 ----EALIKELGLEDRVIL--LGFTKNIEEYYAKAS----IFVLTSRFEGFPMVLLEAMA 274
Query: 592 YGLPVVATK-NGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNI 650
+GLPV++ GP +I++ NGLLV D A+A+ALL+L+ D+ + N ++
Sbjct: 275 FGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDEELRKRMGANARESA 334
Query: 651 HRFSWP 656
RFS
Sbjct: 335 ERFSIE 340
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 91.2 bits (227), Expect = 1e-19
Identities = 54/174 (31%), Positives = 80/174 (45%), Gaps = 24/174 (13%)
Query: 467 EVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGN---RDDIED 523
E + P P ILA+ R P+K TL++AF + A + +ILG+ R+++E
Sbjct: 179 EPLELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARL-VILGDGPLREELEA 237
Query: 524 MSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFG 583
++ L L D+ G QS+ + A +F+ + E F
Sbjct: 238 LAKE--------LGLADRVHFLGF--------QSNPYPYLKAAD----LFVLSSRYEGFP 277
Query: 584 LTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKN 637
++EA A G PVVAT GP +IL+ NGLLV D+ A+A A L LL
Sbjct: 278 NVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLL 331
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 88.1 bits (219), Expect = 2e-18
Identities = 78/363 (21%), Positives = 139/363 (38%), Gaps = 82/363 (22%)
Query: 308 IHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEA 367
H ++ G + ++ L +P+V T H++ + + GRL K+ RR
Sbjct: 90 THTPFS-LGLLGLRVARKLGIPVVATYHTMYEDYTHYVPL-GRLLARAVVRRKLSRRF-- 145
Query: 368 EELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPP 427
+ + V+ + K+ LR + GV + VIP
Sbjct: 146 ----YNRCDAVIAPSE---------------KIADLLR---EYGVKR------PIEVIPT 177
Query: 428 GMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPD 487
G+D + E + +P +L + R
Sbjct: 178 GIDLD-------------------------RFEPVDGDDERRKLGIPEDEPVLLYVGRLA 212
Query: 488 PKKNVTTLLKAFGECQPLRELANMTLIL---GN-RDDIEDMSNSSSVVLTTVLKLIDKYD 543
+KN+ L++AF L+E ++ L++ G R+++E +L +
Sbjct: 213 KEKNIDFLIRAFARL--LKEEPDVKLVIVGDGPEREELE--------------ELARELG 256
Query: 544 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG 603
L +V + + ++PD Y+ A +F+ + E GL ++EA A GLPVVA G
Sbjct: 257 LADRVIFTGFVPREELPDYYKAA----DLFVFASTTETQGLVLLEAMAAGLPVVAVDAPG 312
Query: 604 PVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYL 663
D++ NG L P A+A+ALL+LL D + KN ++ +FS+ +
Sbjct: 313 LPDLVADGENGFLFPP-GDEALAEALLRLLQDPELRRRLSKNAEESAEKFSFAKKVEKLY 371
Query: 664 SHV 666
V
Sbjct: 372 EEV 374
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
| >gnl|CDD|131524 TIGR02471, sucr_syn_bact_C, sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Score = 85.2 bits (211), Expect = 2e-18
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 23/192 (11%)
Query: 778 AGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGD 837
L VGF + TG S+ + +N+ D ++ G+E+Y+ ++ D
Sbjct: 22 ELLRGSGDAVGFGIATGRSVESAKSRYAK--LNLPSPDVLIARVGTEIYY-GPELQPDRF 78
Query: 838 YEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVG-FVDASSSRCQ---SYSIKPGAETRK 893
++ H+++ W + V + DI G + + SY + P E
Sbjct: 79 WQKHIDHDWRRQAVVEAL-----------ADIPGLTLQDDQEQGPFKISYLLDPEGEP-I 126
Query: 894 VDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEK 953
+ IRQRLR + ++ + G L+V+P AS+ ALRYLS RWG+ L +++V
Sbjct: 127 LPQIRQRLRQQSQAAKVILSC-GWFLDVLPLRASKGLALRYLSYRWGLPLEQILVAGDSG 185
Query: 954 GDTDYEDLLVGL 965
D E++L GL
Sbjct: 186 ND---EEMLRGL 194
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. Length = 236 |
| >gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 87.0 bits (216), Expect = 5e-18
Identities = 72/361 (19%), Positives = 120/361 (33%), Gaps = 82/361 (22%)
Query: 308 IHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIE- 366
+HG ++ AA + +P V++ H G L + +R+
Sbjct: 93 VHGLWSYPSLAAARAARKYGIPYVVSPH-------------GMLDPWALPHKALKKRLAW 139
Query: 367 --AEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVV 424
E L A+ V ++ QE ++R + V
Sbjct: 140 FLFERRLLQAAAAVHATSEQE---------------AAEIR---------RLGLKAPIAV 175
Query: 425 IPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALS 484
IP G+D +L R + L P K IL L
Sbjct: 176 IPNGVDIP------------PFAALPSRGRRRKFPIL-------------PDKRIILFLG 210
Query: 485 RPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDL 544
R PKK + L++AF + + L++ D+ + ++ L
Sbjct: 211 RLHPKKGLDLLIEAF--AKLAERFPDWHLVIAGPDEGGY--------RAELKQIAAALGL 260
Query: 545 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP 604
+V + D A +F+ P+ E FG+ + EA A G PVV T
Sbjct: 261 EDRVTFTGMLYGEDKAAALADAD----LFVLPSHSENFGIVVAEALACGTPVVTTDKVPW 316
Query: 605 VDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIH-RFSWPEHCRNYL 663
++++ G +VD D +A+A AL + L +NG + RFSW + L
Sbjct: 317 QELIEY-GCGWVVDD-DVDALAAALRRALELPQRLKAMGENGRALVEERFSWTAIAQQLL 374
Query: 664 S 664
Sbjct: 375 E 375
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375 |
| >gnl|CDD|218442 pfam05116, S6PP, Sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Score = 83.1 bits (206), Expect = 1e-17
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 20/183 (10%)
Query: 785 GRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYEAHVEY 844
+ TG SL E ++ + D ++ + G+E+Y+ +V D ++ H++Y
Sbjct: 34 PDSLLVFATGRSLDSAKELLKE--KPLPTPDVLITSVGTEIYY-GPSLVPDQAWQEHLDY 90
Query: 845 RWPGENVRSV---VPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRL 901
W + V P + + + + SY + P A + + Q L
Sbjct: 91 GWDRQAVVEALAKFPGLTLQPE---------EEQRPHKV-SYFLDPEAAPAVLKELEQLL 140
Query: 902 RMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDL 961
RG ++Y +G L+++P AS+ QALRYL+ +WG+ +V G+ G+ D +L
Sbjct: 141 EKRGLDVKVIY-SSGRDLDILPLRASKGQALRYLAKKWGLPPENTLV-CGDSGN-D-AEL 196
Query: 962 LVG 964
+G
Sbjct: 197 FIG 199
|
This family consists of Sucrose-6F-phosphate phosphohydrolase proteins found in plants and cyanobacteria. Sucrose-6(F)-phosphate phosphohydrolase catalyzes the final step in the pathway of sucrose biosynthesis. Length = 247 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 84.5 bits (210), Expect = 2e-17
Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 22/183 (12%)
Query: 475 PHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMT--LILGNRDDIEDMSNSSSVVL 532
P L ++R K + LL+A + L+ L++G+ D+
Sbjct: 186 EDDPVFLFVARLLKDKGIDELLEAA---RILKAKGPNVRLLLVGDGDEENP--------- 233
Query: 533 TTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAY 592
+ I+K L G+V + + DVP++ A VF+ P+ E ++EA A
Sbjct: 234 -AAILEIEKLGLEGRVEFLGF--RDDVPELLAAA----DVFVLPSYREGLPRVLLEAMAM 286
Query: 593 GLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNI-H 651
G PV+AT G + + NG LV P D A+ADA+ +L+ D + + + K
Sbjct: 287 GRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDPELRARMGQAARKRAEE 346
Query: 652 RFS 654
F
Sbjct: 347 EFD 349
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 82.6 bits (205), Expect = 1e-16
Identities = 61/223 (27%), Positives = 95/223 (42%), Gaps = 50/223 (22%)
Query: 421 RMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTI 480
++VVIP G+D + R + + LP I
Sbjct: 160 KIVVIPNGVDTERFSPDLDAR-----------ARLREELGLPE------------DTFLI 196
Query: 481 LALSRPDPKKNVTTLLKAFGECQPLRELANMTLIL----GNRDDIEDMSNSSSVVLTTVL 536
++R P+K+ TLL+A L++ N L+L +R ++E ++ L
Sbjct: 197 GIVARLHPQKDHATLLRAAALL--LKKFPNARLLLVGDGPDRANLELLALKE-------L 247
Query: 537 KLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPV 596
L DK L G+ +SDVP + VF+ +L E F ++EA A GLPV
Sbjct: 248 GLEDKVILLGE--------RSDVPALLNAL----DVFVLSSLSEGFPNVLLEAMACGLPV 295
Query: 597 VATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMW 639
VAT G +++ + G LV P D A+A+A+ LLAD +
Sbjct: 296 VATDVGDNAELV--GDTGFLVPPGDPEALAEAIEALLADPALR 336
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 77.3 bits (190), Expect = 1e-15
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 15/139 (10%)
Query: 479 TILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKL 538
+ + R P+K + L++AF ++ L++ + + +L
Sbjct: 106 DKVFVGRLAPEKGLDDLIEAFALL--KERGPDLKLVIAGDGPEREY----------LEEL 153
Query: 539 IDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVA 598
+ L +V + ++ + AA VF+ P+L E FGL ++EA A GLPV+A
Sbjct: 154 LAALLLLDRVIFLGGLDPEELLALLLAAAD---VFVLPSLREGFGLVVLEAMACGLPVIA 210
Query: 599 TKNGGPVDILKALNNGLLV 617
T GGP +I++ GLLV
Sbjct: 211 TDVGGPPEIVEDGLTGLLV 229
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|99998 cd04949, GT1_gtfA_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Score = 80.0 bits (198), Expect = 1e-15
Identities = 52/183 (28%), Positives = 98/183 (53%), Gaps = 23/183 (12%)
Query: 474 NPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVL 532
PHK I+ ++R P+K + L+KAF + ++++ + TL I G D+ E +
Sbjct: 203 KPHK--IITVARLAPEKQLDQLIKAFA--KVVKQVPDATLDIYGYGDEEEKLK------- 251
Query: 533 TTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAY 592
+LI++ L V + + D+ ++Y+ A + + + E FGL+++EA ++
Sbjct: 252 ----ELIEELGLEDYVFLKGYTR--DLDEVYQKA----QLSLLTSQSEGFGLSLMEALSH 301
Query: 593 GLPVVATK-NGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIH 651
GLPV++ N GP +I++ NG LV D A+A+A+++LL D + + + +N
Sbjct: 302 GLPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEAIIELLNDPKLLQKFSEAAYENAE 361
Query: 652 RFS 654
R+S
Sbjct: 362 RYS 364
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 372 |
| >gnl|CDD|132490 TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase | Back alignment and domain information |
|---|
Score = 73.6 bits (181), Expect = 1e-13
Identities = 114/486 (23%), Positives = 173/486 (35%), Gaps = 100/486 (20%)
Query: 172 IVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDS 231
+ +ISMH ++ D GG Y++E A LA G+ VD+ TR +
Sbjct: 1 VAMISMHT----SPLQQPGTGDAGGMNVYILETATELAR-RGI-EVDIFTRATRPSQPPV 54
Query: 232 SYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMAR 291
P G + + G + + KE L + F G L R
Sbjct: 55 VEVAP--------------GVRVRNVVAGPYEG-LDKEDLPTQLCAFTGGVL-------R 92
Query: 292 AIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRL 351
A +P + +IH HY +G+V L VP+V T H+L K L G
Sbjct: 93 AEARH----EPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTLAAVK-NAALADGDT 147
Query: 352 PKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRG 411
P+ RRI ++L +D ++ ++ +T +E YD
Sbjct: 148 PE------PEARRIGEQQL-VDNADRLIANTDEEARDLVRHYDA-------------DPD 187
Query: 412 VSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRF 471
R+ V+ PG D DR + R
Sbjct: 188 ---------RIDVVAPGADLERFRP---------------GDRATERA----------RL 213
Query: 472 FTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMT-LILGNRDDIEDMSNSSSV 530
+ + R P K LL+A E N+ +++G S S
Sbjct: 214 GLPLDTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGP------SGSGLA 267
Query: 531 VLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAA 590
+++L + + +V + ++ +YR A V P+ E FGL +EA
Sbjct: 268 TPDALIELAAELGIADRVRFLPPRPPEELVHVYRAAD----VVAVPSYNESFGLVAMEAQ 323
Query: 591 AYGLPVVATKNGG-PVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKN 649
A G PVVA + GG PV + GLLVD HD ADAL +LL D +++
Sbjct: 324 ACGTPVVAARVGGLPVAVADGE-TGLLVDGHDPADWADALARLLDDPRTRIRMGAAAVEH 382
Query: 650 IHRFSW 655
FSW
Sbjct: 383 AAGFSW 388
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Length = 405 |
| >gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 71.5 bits (176), Expect = 5e-13
Identities = 32/78 (41%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 561 DIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPH 620
IY A VF+ P+L E F T IEA A G PVVA GG DI+ G L P
Sbjct: 260 LIYSAA----DVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPG 315
Query: 621 DQNAIADALLKLLADKNM 638
D +A+ + LLAD +
Sbjct: 316 DPEDLAEGIEWLLADPDE 333
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365 |
| >gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 70.3 bits (173), Expect = 1e-12
Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 20/186 (10%)
Query: 470 RFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSS 529
R + ++ +S P K + +++ F + + +E+ L++G+ +
Sbjct: 190 RLGAPEGEKVLIHISNFRPVKRIDDVIRIFAKVR--KEVPARLLLVGDGPERSPA----- 242
Query: 530 VVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEA 589
+L + L V + KQ V ++ +A +F+ P+ E FGL +EA
Sbjct: 243 ------ERLARELGLQDDVLF--LGKQDHVEELLSIA----DLFLLPSEKESFGLAALEA 290
Query: 590 AAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKN 649
A G+PVVA+ GG +++K G LVD D A+A+ L LL D +W E +
Sbjct: 291 MACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDDELWQEFSRAARNR 350
Query: 650 I-HRFS 654
RF
Sbjct: 351 AAERFD 356
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371 |
| >gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 68.4 bits (168), Expect = 5e-12
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 580 EPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMW 639
E F L I EA A G+PV+A+ GG ++++ NGLL P D +A AL +L+ D ++
Sbjct: 274 ENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDPDLL 333
Query: 640 SECRKNGLKNIH 651
R
Sbjct: 334 ERLRAGIEPPRS 345
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359 |
| >gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 1e-11
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Query: 556 QSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGL 615
+ DVP + + +F+ P+L E TI+EA A GLPV+AT GG ++++ G
Sbjct: 263 RDDVPALMQ----ALDLFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGA 318
Query: 616 LVDPHDQNAIADALLKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYL 663
LV P D A+A AL ++D G +FS Y
Sbjct: 319 LVPPGDAVALARALQPYVSDPAARRAHGAAGRARAEQQFSINAMVAAYA 367
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374 |
| >gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 66.9 bits (164), Expect = 2e-11
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 470 RFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSS 529
+ KP IL R K ++A + ++ ++ L++ D + +
Sbjct: 178 EWPLPKGKPVILLPGRLTRWKGQEVFIEALARLK--KDDPDVHLLIV--GDAQGRRFYYA 233
Query: 530 VVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAL-VEPFGLTIIE 588
+L+LI + L +V + H SD+P Y LA + ++ + E FG T +E
Sbjct: 234 ----ELLELIKRLGLQDRVTFVGH--CSDMPAAYALAD----IVVSASTEPEAFGRTAVE 283
Query: 589 AAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLL 633
A A G PV+A+ +GG + ++ GLLV P D A+A AL ++L
Sbjct: 284 AQAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQIL 328
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355 |
| >gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA | Back alignment and domain information |
|---|
Score = 63.8 bits (156), Expect = 1e-10
Identities = 39/179 (21%), Positives = 80/179 (44%), Gaps = 19/179 (10%)
Query: 470 RFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSS 529
+ + ++ +S P K V +++ F Q +E+ L++G+ +
Sbjct: 192 KLGAPEDEKVLIHISNFRPVKRVEDVIEVFARVQ--QEVPAKLLLVGDGPE--------- 240
Query: 530 VVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEA 589
+ +L+ + L +V + KQ DV ++ ++ +F+ P+ E FGL +EA
Sbjct: 241 --RSPAEQLVRELGLTDRVLFLG--KQDDVAELLSIS----DLFLLPSEKESFGLAALEA 292
Query: 590 AAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLK 648
A G+PV+A+ GG ++++ G L D D +A+ + LL D+ + +
Sbjct: 293 MACGVPVIASNAGGIPEVVEHGVTGFLCDVGDVETMAEYAISLLEDEELLQRFSAAARE 351
|
Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374 |
| >gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Score = 63.3 bits (155), Expect = 2e-10
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 32/187 (17%)
Query: 477 KPTILALSRPDPKKNVTTLLKAFGECQPLRELA-NMTL-ILG---NRDDIEDMSNSSSVV 531
IL++ R KK + LL+A L++ + L I+G RD++E
Sbjct: 179 PLRILSVGRLVEKKGLDYLLEA---LALLKDRGIDFRLDIVGDGPLRDELE--------- 226
Query: 532 LTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALV------EPFGLT 585
LI + L +V Q +V ++ R A +F+ P++ E +
Sbjct: 227 -----ALIAELGLEDRVTLLGAKSQEEVRELLRAAD----LFVLPSVTAADGDREGLPVV 277
Query: 586 IIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKN 645
++EA A GLPV++T G ++++ GLLV P D A+ADA+ +LL D + E +
Sbjct: 278 LMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDPELRREMGEA 337
Query: 646 GLKNIHR 652
G +
Sbjct: 338 GRARVEE 344
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355 |
| >gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Score = 63.1 bits (154), Expect = 2e-10
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 36/170 (21%)
Query: 480 ILALSRPDPKKNVTTLLKAFGECQPLRELANMT-----LILGN---RDDIEDMSNSSSVV 531
ILA+ R K+ LLKAF +L + LI G+ R +E + +
Sbjct: 191 ILAVGRLVEAKDYPNLLKAF------AKLLSDYLDIKLLIAGDGPLRATLERLIKA---- 240
Query: 532 LTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAA 591
L L ++ L G D+ Y A +F+ + E FGL + EA A
Sbjct: 241 ----LGLSNRVKLLGLR--------DDIAAYYNAA----DLFVLSSAWEGFGLVVAEAMA 284
Query: 592 YGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSE 641
LPVVAT GG +++ ++GL+V D A+A+ + ++L +
Sbjct: 285 CELPVVATDAGGVREVVG--DSGLIVPISDPEALANKIDEILKMSGEERD 332
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360 |
| >gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 62.7 bits (153), Expect = 3e-10
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 589 AAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLK 648
A +G PV++T G ++L GLLV P D A+A+A+ +LLAD + R +
Sbjct: 289 AIGFGKPVISTPVGHAEEVLDG-GTGLLVPPGDPAALAEAIRRLLADPELAQALRARARE 347
Query: 649 NIHRFSWPE 657
SW
Sbjct: 348 YARAMSWER 356
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366 |
| >gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 62.7 bits (153), Expect = 3e-10
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 30/173 (17%)
Query: 477 KPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGN---RDDIEDMSNSSSVVLT 533
P IL + R KK LL+AF + +I G+ +E ++ +
Sbjct: 188 PPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVII-GDGPLLAALEALARA------ 240
Query: 534 TVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEP------FGLTII 587
L L + G A P ++V ++ R A +F+ P++ P + ++
Sbjct: 241 --LGLGGRVTFLG--AQP----HAEVRELMRRAR----IFLQPSVTAPSGDAEGLPVVLL 288
Query: 588 EAAAYGLPVVATKNGG-PVDILKALNNGLLVDPHDQNAIADALLKLLADKNMW 639
EA A G+PVVAT++GG P + GLLV D A+A AL +LLAD ++
Sbjct: 289 EAQASGVPVVATRHGGIPEAVEDG-ETGLLVPEGDVAALAAALGRLLADPDLR 340
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367 |
| >gnl|CDD|99984 cd03813, GT1_like_3, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 63.0 bits (154), Expect = 4e-10
Identities = 45/201 (22%), Positives = 84/201 (41%), Gaps = 24/201 (11%)
Query: 470 RFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSS 528
R P + + R P K++ T ++A +++ + ++G D+ + +
Sbjct: 286 RARPEKEPPVVGLIGRVVPIKDIKTFIRAAAIV--RKKIPDAEGWVIGPTDEDPEYAEE- 342
Query: 529 SVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIE 588
+L++ L V K +V + V + ++ E L I+E
Sbjct: 343 ------CRELVESLGLEDNV---KFTGFQNVKEYLPKL----DVLVLTSISEGQPLVILE 389
Query: 589 AAAYGLPVVATKNGGPVDILK-----ALNN-GLLVDPHDQNAIADALLKLLADKNMWSEC 642
A A G+PVVAT G ++++ AL G +V P D A+A A+L+LL D +
Sbjct: 390 AMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAILRLLKDPELRRAM 449
Query: 643 RKNGLKNIHRF-SWPEHCRNY 662
+ G K + R+ + +Y
Sbjct: 450 GEAGRKRVERYYTLERMIDSY 470
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 475 |
| >gnl|CDD|109900 pfam00862, Sucrose_synth, Sucrose synthase | Back alignment and domain information |
|---|
Score = 59.9 bits (145), Expect = 4e-09
Identities = 66/281 (23%), Positives = 121/281 (43%), Gaps = 50/281 (17%)
Query: 172 IVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVD----------LLT 221
+V++S HG N+ +G DTGGQV Y+++ RAL + E + R+ L+
Sbjct: 275 VVILSPHGYFAQANV-LGY-PDTGGQVVYILDQVRALES-EMLVRIKQQGLDITPRILIV 331
Query: 222 RQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPC----GARDKYIAKESLWPYIHE 277
++ V ++ + E + G+ +I+R+P G K+I++ +WPY+
Sbjct: 332 TRLLPDAVGTTCNQRLEKVF------GTEHTHILRVPFRTEKGILRKWISRFEVWPYLET 385
Query: 278 FVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSL 337
F + ++A I ++ P +I G+Y+D VA+ L+ L V H+L
Sbjct: 386 FAE-------DVASEIAAELQA----KPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHAL 434
Query: 338 GRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIE------MQWG 391
+ K+ K Y + A+ + ++ ++ ++TST QEI Q+
Sbjct: 435 EKTKYPD---SDIYWKKFEKKYHFSCQFTADLIAMNHADFIITSTFQEIAGSKDTVGQYE 491
Query: 392 LYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFS 432
+ F L R V F P+ ++ PG D +
Sbjct: 492 SHTAFTLP-------GLYRVVHGIDVFDPKFNIVSPGADMT 525
|
Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. Length = 550 |
| >gnl|CDD|99965 cd03791, GT1_Glycogen_synthase_DULL1_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 59.5 bits (145), Expect = 5e-09
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 11/101 (10%)
Query: 572 VFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALN------NGLLVDPHDQNAI 625
F+ P+ EP GLT + A YG + GG D + N G + + ++ +A+
Sbjct: 373 FFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADAL 432
Query: 626 ADALLKLLA---DKNMWSECRKNGLKNIHRFSWPEHCRNYL 663
AL + LA D W + ++N + FSW + YL
Sbjct: 433 LAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYL 471
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. Length = 476 |
| >gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 58.7 bits (143), Expect = 6e-09
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 580 EPFGLTIIEAAAYGLPVVATK-NGGPVDILKALNN--GLLVDPHDQNAIADALLKLLADK 636
E FG+ ++EA A+G PV++T+ G + L+ GL+V P D A+A+A+ +LL D
Sbjct: 276 EAFGIVLLEAMAFGKPVISTEIGTGGSYV--NLHGVTGLVVPPGDPAALAEAIRRLLEDP 333
Query: 637 NMWSECRKNGLKNIHRFS 654
+ + R
Sbjct: 334 ELRERLGEAAR---ERAE 348
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357 |
| >gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 58.8 bits (143), Expect = 7e-09
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 586 IIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKN 645
+ E A G PV+A+ +G ++++ GL+V P D A+A A+L+LL D +E +N
Sbjct: 316 LFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDPEERAEMGEN 375
Query: 646 GLKNIH-RFSWPEHCRNYL 663
G + + +FS + L
Sbjct: 376 GRRYVEEKFSREKLAERLL 394
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394 |
| >gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Score = 56.8 bits (137), Expect = 3e-08
Identities = 52/202 (25%), Positives = 84/202 (41%), Gaps = 24/202 (11%)
Query: 463 PMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIE 522
+ R+ + +P IL + R +K V LL A + + + L G D E
Sbjct: 187 DGNVVLDRYGIDRSRPYILFVGRITRQKGVPHLLDAV---HYIPKDVQVVLCAGAPDTPE 243
Query: 523 DMSNSSSVVLTTVLKLIDKYD--LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVE 580
V V + + D G + K + ++ ++ A VF+ P++ E
Sbjct: 244 --------VAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAE----VFVCPSIYE 291
Query: 581 PFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNA------IADALLKLLA 634
P G+ +EA A G PVVA+ GG +++ G LV P + +A +A A+ LLA
Sbjct: 292 PLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLA 351
Query: 635 DKNMWSECRKNGLKN-IHRFSW 655
D + + G K FSW
Sbjct: 352 DPELAKKMGIAGRKRAEEEFSW 373
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388 |
| >gnl|CDD|99970 cd03796, GT1_PIG-A_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 54.9 bits (133), Expect = 1e-07
Identities = 44/187 (23%), Positives = 72/187 (38%), Gaps = 55/187 (29%)
Query: 470 RFFTNPHKP-----TILALSRPDPKKNVTTLLKAFGE-CQPLRELANMTLILGN----RD 519
F +P K TI+ +SR +K + L+ E C+ N+ I+G R
Sbjct: 181 DFTPDPSKRDNDKITIVVISRLVYRKGIDLLVGIIPEICKKHP---NVRFIIGGDGPKRI 237
Query: 520 DIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKG-VFINPAL 578
+E+M +KY+L +V V D+ +G +F+N +L
Sbjct: 238 LLEEM--------------REKYNLQDRVELLGAVPHERVRDVLV-----QGHIFLNTSL 278
Query: 579 VEPFGLTIIEAAAYGLPVVATKNGG----------------PVDILKALNNGL------L 616
E F + I+EAA+ GL VV+T+ GG I++ L +
Sbjct: 279 TEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPDMILLAEPDVESIVRKLEEAISILRTGK 338
Query: 617 VDPHDQN 623
DP +
Sbjct: 339 HDPWSFH 345
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. Length = 398 |
| >gnl|CDD|234448 TIGR04047, MSMEG_0565_glyc, glycosyltransferase, MSMEG_0565 family | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 2e-07
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 34/200 (17%)
Query: 478 PTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGN----------RDDIEDMSNS 527
P +LA+ +P+KN LL+AF L++ R + E +
Sbjct: 194 PYVLAVGGIEPRKNTIDLLEAFA--LLRARRPQAQLVIAGGATLFDYDAYRREFEARAAE 251
Query: 528 SSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTII 587
+ V+ + G V +D+P +YR A F P+L E FGL ++
Sbjct: 252 LGLDPGAVV-------ITGPVP------DADLPALYRCAD----AFAFPSLKEGFGLVVL 294
Query: 588 EAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGL 647
EA A G+PVVA + P + DP D ++IADAL L G
Sbjct: 295 EALASGIPVVA-SDIAPFTEYLGRFDAAWADPSDPDSIADALALALDPARR-PALLAAGP 352
Query: 648 KNIHRFSWPEHCRNYLSHVE 667
+ R++W R +H+E
Sbjct: 353 ELAARYTWDASAR---AHLE 369
|
A conserved gene cluster found sporadically from Actinobacteria to Proteobacteria to Cyanobacteria features a radical SAM protein, an N-acetyltransferase, an oxidoreductase, and two additional proteins whose functional classes are unclear. The metabolic role of the cluster is probably biosynthetic. This glycosyltransferase, named from member MSMEG_0565 from Mycobacterium smegmatis, occurs in most but not all instances of the cluster [Unknown function, Enzymes of unknown specificity]. Length = 373 |
| >gnl|CDD|99976 cd03804, GT1_wbaZ_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 52.9 bits (128), Expect = 4e-07
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 13/103 (12%)
Query: 559 VPD--IYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLL 616
V D + L A+ + F+ PA E FG+ +EA A G PV+A GG ++ + G+L
Sbjct: 250 VSDEELRDLYARARA-FLFPA-EEDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGIL 307
Query: 617 VDPHDQNAIADALLKLLADKNMW---SECRKNGLKNIHRFSWP 656
+ ++A A+ + +KN R + RFS
Sbjct: 308 FEEQTVESLAAAVER--FEKNEDFDPQAIRAHAE----RFSES 344
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. Length = 351 |
| >gnl|CDD|99977 cd03805, GT1_ALG2_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 51.8 bits (125), Expect = 1e-06
Identities = 44/199 (22%), Positives = 83/199 (41%), Gaps = 32/199 (16%)
Query: 477 KPTILALSRPDPKKNVTTLLKAFGE-CQPLRELANMTLILG---------NRD---DIED 523
K T L+++R + KKN+ ++AF L E N+ L++ N + +++
Sbjct: 211 KKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQR 270
Query: 524 MSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFG 583
++ ++ V+ L + K+ L + + + P+ E FG
Sbjct: 271 LAEELLLLEDQVIFLP---------SISDSQKEL-------LLSSARALLYTPSN-EHFG 313
Query: 584 LTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECR 643
+ +EA G PV+A +GGP++ + G L +P A+A+LKL D ++
Sbjct: 314 IVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDPDLADRMG 372
Query: 644 KNGLKNIH-RFSWPEHCRN 661
G K + +FS
Sbjct: 373 AAGRKRVKEKFSTEAFAER 391
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. Length = 392 |
| >gnl|CDD|99966 cd03792, GT1_Trehalose_phosphorylase, Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Score = 51.4 bits (124), Expect = 1e-06
Identities = 54/212 (25%), Positives = 86/212 (40%), Gaps = 46/212 (21%)
Query: 470 RFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELAN-MTLIL---GNRDDIEDMS 525
++ +P +P I +SR DP K+ ++ A+ + ++E L+L G DD E
Sbjct: 183 KYGIDPERPYITQVSRFDPWKDPFGVIDAYRK---VKERVPDPQLVLVGSGATDDPE--- 236
Query: 526 NSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKG------------VF 573
+V VL Y + PDI+ L V
Sbjct: 237 --GWIVYEEVL------------EYAEGD-----PDIHVLTLPPVSDLEVNALQRASTVV 277
Query: 574 INPALVEPFGLTIIEAAAYGLPVVATKNGG-PVDILKALNNGLLVDPHDQNAIADALLKL 632
+ ++ E FGLT+ EA G PV+A GG P+ I G LVD ++ A +L L
Sbjct: 278 LQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGE-TGFLVDTVEEA--AVRILYL 334
Query: 633 LADKNMWSECRKNGLKNIH-RFSWPEHCRNYL 663
L D + + N +++ F H ++YL
Sbjct: 335 LRDPELRRKMGANAREHVRENFLITRHLKDYL 366
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. Length = 372 |
| >gnl|CDD|185381 PRK15484, PRK15484, lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Score = 51.3 bits (123), Expect = 1e-06
Identities = 43/191 (22%), Positives = 78/191 (40%), Gaps = 27/191 (14%)
Query: 475 PHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSS----- 529
P + +L R P K + L++AF + N+ L++ + D + SS
Sbjct: 191 PDETVLLYAGRISPDKGILLLMQAFEKLATAHS--NLKLVV-----VGDPTASSKGEKAA 243
Query: 530 ---VVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTI 586
VL ++ D+ + G K H Y LA V + + E F +
Sbjct: 244 YQKKVLEAAKRIGDRCIMLGGQPPEKMHN------YYPLADL---VVVPSQVEEAFCMVA 294
Query: 587 IEAAAYGLPVVATKNGGPVDILKALNNGL-LVDPHDQNAIADALLKLLADKNMWSECRKN 645
+EA A G PV+A+ GG + + G L +P ++I + + LAD + ++ +
Sbjct: 295 VEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPEL-TQIAEQ 353
Query: 646 GLKNI-HRFSW 655
+ ++SW
Sbjct: 354 AKDFVFSKYSW 364
|
Length = 380 |
| >gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 3e-06
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 572 VFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDIL---KALNNGLLVDPHDQNAIADA 628
VF+ P+ E G ++EA A G+PVVA + GG DI+ + G L P D + +
Sbjct: 334 VFVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEK 393
Query: 629 LLKLLADKNMWSECRKNGLKNIHRFSW 655
L LLAD + + + ++ W
Sbjct: 394 LETLLADPELRERMGAAAREEVEKWDW 420
|
Length = 465 |
| >gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 49.5 bits (119), Expect = 5e-06
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 580 EPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLA 634
EPFGL +IEA A G PV+A + G ++++ G LVD + +A A+ +
Sbjct: 255 EPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDSVE--ELAAAVARADR 307
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335 |
| >gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 7e-06
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 553 HHKQSDVPDIYRLAAKTKGVFINPALV-EPFGLTIIEAAAYGLPVVATKNGGPVDILKAL 611
D+ + A V + P L ++EA A GLPVVAT + G + + L
Sbjct: 57 LGFVEDLAALLASAD----VALAPLRFGAGSPLKLLEALAAGLPVVAT-DIGAEGLPEDL 111
Query: 612 NNGLLVDPHDQNAIADALLKLLAD 635
G+LV D A+A+++LLAD
Sbjct: 112 GWGVLV-ADDPEEFAEAIVRLLAD 134
|
Length = 134 |
| >gnl|CDD|99997 cd04946, GT1_AmsK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 9e-06
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 561 DIYRLAAKTK-GVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDP 619
++Y+L + VF+N + E ++I+EA ++G+PV+AT GG +I+ NGLL+
Sbjct: 301 EVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSK 360
Query: 620 HDQNA-IADALLKL-----------LADKNMWSECRKNGLKNIHRF 653
+ +L K + W E N KN F
Sbjct: 361 DPTPNELVSSLSKFIDNEEEYQTMREKAREKWEE-NFNASKNYREF 405
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. Length = 407 |
| >gnl|CDD|234487 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG-Bacteroidales peptide system | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 2e-05
Identities = 50/231 (21%), Positives = 88/231 (38%), Gaps = 45/231 (19%)
Query: 436 TQDTMGGDTDLK----SLIGNDRTQSKRNLPPMWSEVMR--FFTNPHKPTILALSRPDPK 489
TQ+ + D + +I N T L + + +R + + IL + R D
Sbjct: 180 TQNLLYEDYGIPKEKIVVIYNGLTDEAIYLSEVERKKLRKKLGFSEDEKIILFVGRLDEI 239
Query: 490 KNVTTLLKAFGECQPLRELANMTLIL---GNRDDIEDMSNS--SSVVLTTVLKLIDKYDL 544
K V L++AF L++ N L++ G+ S + T +DK L
Sbjct: 240 KGVDYLIEAFK--IVLKKDPNCRLVIVGDGDYSRYLQECKKIWSKITFT---GKLDKEKL 294
Query: 545 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP 604
Y +Y++A V + P+ E IE +GLP++ T + G
Sbjct: 295 YE---------------LYQIA----DVGVLPSFHEQCSYVAIEMMMHGLPLIGTTSTGL 335
Query: 605 VDILKALNNGLL---------VDPHDQNAIADALLKLLADKNMWSECRKNG 646
++++ NG V+ D+ + LLKLL+ + + KN
Sbjct: 336 SEMIEDGLNGYKIPIKEYRDYVEL-DKKELVQKLLKLLSSSDEAKQMGKNA 385
|
Members of this protein family are predicted glycosyltransferases that occur in conserved gene neighborhoods in various members of the Bacteroidales. These neighborhoods feature a radical SAM enzyme predicted to act in peptide modification (family TIGR04148), peptides from family TIGR04149 with a characteristic GG cleavage motif, and several other proteins. Length = 406 |
| >gnl|CDD|223374 COG0297, GlgA, Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 2e-05
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 14/104 (13%)
Query: 572 VFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALN--------NGLLVDPHDQN 623
V + P+ EP GLT + A YG + + GG D + N G L + +
Sbjct: 371 VILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPD 430
Query: 624 AIADALLKLL----ADKNMWSECRKNGLKNIHRFSWPEHCRNYL 663
+A+AL + L A +W + + N + FSW + Y+
Sbjct: 431 HLANALRRALVLYRAPPLLWRKVQPNAMG--ADFSWDLSAKEYV 472
|
Length = 487 |
| >gnl|CDD|233724 TIGR02095, glgA, glycogen/starch synthase, ADP-glucose type | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 3e-05
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 12/94 (12%)
Query: 572 VFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALN------NGLLVDPHDQNAI 625
+ P+ EP GLT + A YG + + GG D + + G L + +D A+
Sbjct: 368 FILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGAL 427
Query: 626 ADALLKLLA----DKNMWSECRKNGLKNIHRFSW 655
AL + L D ++W +KN + FSW
Sbjct: 428 LAALSRALRLYRQDPSLWEALQKNAMS--QDFSW 459
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 473 |
| >gnl|CDD|234452 TIGR04063, stp3, PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 5e-05
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 578 LVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKN 637
LV P L +EA A G V A+ GG ++++ G+L D A+A ALL LL ++
Sbjct: 305 LVTP--LKPLEAMAQGRLVAASDVGGHRELIRDGETGVLFPAGDPAALAAALLALLDNRA 362
Query: 638 MWSECRKNGLKNI--HRFSWPEHCRNY 662
W E R + + R +W Y
Sbjct: 363 QWPELRAAARRFVETER-NWAASVARY 388
|
PEP-CTERM/exosortase is a protein-sorting system associated with exopolysaccharide production. Members of this protein family are group 1 glycosyltransferases (see pfam00534) in which the overwhelming majority occur in species with the EpsH1 form of exosortase (see TIGR03109), and usually co-clustered with the exosortase. A typical member is Daro_2409 from Dechloromonas aromatica RCB. Length = 397 |
| >gnl|CDD|222237 pfam13579, Glyco_trans_4_4, Glycosyl transferase 4-like domain | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 2e-04
Identities = 50/234 (21%), Positives = 75/234 (32%), Gaps = 76/234 (32%)
Query: 195 GGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYI 254
GG +YV+ELARALA + V ++T P DG +
Sbjct: 1 GGAERYVLELARALAARG--HEVTVVTP-----------RGPPGRPELEEDGVR-----V 42
Query: 255 IRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYAD 314
R+P R G L + + R + + P V+H H
Sbjct: 43 HRLPVPRRPSL--------------PGDLRALRRLRRLLRRE-------RPDVVHAHGPL 81
Query: 315 AGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDA 374
AG +A + VP+V+T H L L + L + + E L
Sbjct: 82 AGLLARLAARRRGVPVVVTPHGLA------LRQGSGLKRRL--------ARALERRLLRR 127
Query: 375 SEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPG 428
++ VV + E E +R G R+VV+P G
Sbjct: 128 ADAVVAVSEAEAE-----------------LLRAL------GVPAARVVVVPNG 158
|
Length = 158 |
| >gnl|CDD|99983 cd03812, GT1_CapH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 0.001
Identities = 34/128 (26%), Positives = 52/128 (40%), Gaps = 27/128 (21%)
Query: 485 RPDPKKNVTTLLKAFGECQPLRELANMTLIL-GN---RDDIEDMSNSSSVVLTTVLKLID 540
R +KN L++ F E N L+L G+ ++I+ L L D
Sbjct: 200 RFSEQKNHEFLIEIFAELLKKNP--NAKLLLVGDGELEEEIKKKVKE--------LGLED 249
Query: 541 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATK 600
K G +DVP++ + VF+ P+L E L +IEA A GLP + +
Sbjct: 250 KVIFLGVR--------NDVPELLQAM----DVFLFPSLYEGLPLVLIEAQASGLPCILSD 297
Query: 601 NGGP-VDI 607
VD+
Sbjct: 298 TITKEVDL 305
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). Length = 358 |
| >gnl|CDD|185325 PRK15427, PRK15427, colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 0.001
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 27/174 (15%)
Query: 469 MRFFTNPHKP-TILALSRPDPKKNVTTLLKAFGECQPLRE--LANMTLILGNRDDIEDMS 525
R P P I++++R KK + ++A C+ L+E +A ILG E
Sbjct: 213 PRPVKAPATPLEIISVARLTEKKGLHVAIEA---CRQLKEQGVAFRYRILGI-GPWERR- 267
Query: 526 NSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAL------V 579
L T LI++Y L V P +V + A VF+ P++ +
Sbjct: 268 ------LRT---LIEQYQLEDVVEMPGFKPSHEVKAMLDDA----DVFLLPSVTGADGDM 314
Query: 580 EPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLL 633
E + ++EA A G+PVV+T + G ++++A +G LV +D A+A L
Sbjct: 315 EGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAFS 368
|
Length = 406 |
| >gnl|CDD|130549 TIGR01485, SPP_plant-cyano, sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 0.002
Identities = 48/247 (19%), Positives = 98/247 (39%), Gaps = 38/247 (15%)
Query: 747 QMLIVIAADC-----YDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETM 801
++L+V D D D A +++ L + TG S
Sbjct: 1 RLLLVSDLDNTLVDHTDGDNQALLRLNALLEDHRGEDSL--------LVYSTGRSPHSYK 52
Query: 802 EAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYEAHVEYRWPGENVRSVVPRVARA 861
E + + D V + GSE+Y+ V D + ++ +W + V ++ +
Sbjct: 53 EL--QKQKPLLTPDIWVTSVGSEIYYG-GAEVPDQHWAEYLSEKWQRDIVVAITDKFEEL 109
Query: 862 EDGAEDDIVGFVDASSSRCQ--SYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRL 919
+ + R S+ + P A + + + L+ G L+Y+ +G L
Sbjct: 110 KPQPD---------LEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYS-SGKDL 159
Query: 920 NVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGS 979
+++P + + QAL+YL + ++ S+ +V G+ G+ + L + +RG V+ +
Sbjct: 160 DILPQGSGKGQALQYLLQKLAMEPSQTLV-CGDSGND------IELFEIGSVRG-VIVSN 211
Query: 980 --EKLLH 984
E+LL
Sbjct: 212 AQEELLQ 218
|
This model describes the sucrose phosphate phosphohydrolase from plants and cyanobacteria (SPP). SPP is a member of the Class IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. This model is limited to plants and cyanobacteria. However, a closely related group of sequences from bacteria and archaea (TIGR*****) may prove to catalyze the same reaction. If so, the SPP-subfamily model (TIGR01482) containing both of these groups should be promoted to equivalog and the two smaller models retired. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. Length = 249 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1024 | |||
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 100.0 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 100.0 | |
| PLN00142 | 815 | sucrose synthase | 100.0 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 100.0 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 100.0 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 100.0 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 100.0 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 100.0 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 100.0 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 100.0 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 100.0 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 100.0 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 100.0 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 100.0 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 100.0 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 100.0 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 100.0 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 100.0 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 100.0 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 100.0 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 100.0 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 100.0 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 100.0 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 100.0 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 100.0 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 100.0 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 100.0 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 100.0 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 100.0 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 100.0 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 100.0 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.98 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.98 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.98 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.98 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.98 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.98 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.98 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.98 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.97 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.97 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 99.97 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.97 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 99.97 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.97 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.97 | |
| PF00862 | 550 | Sucrose_synth: Sucrose synthase; InterPro: IPR0003 | 99.97 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 99.97 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.97 | |
| PLN02887 | 580 | hydrolase family protein | 99.97 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.96 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.96 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.96 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.96 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.96 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.96 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.96 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.96 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.96 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.95 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.95 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.95 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.95 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.95 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.95 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.94 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.93 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.93 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.93 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.92 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 99.9 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.9 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 99.89 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 99.88 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.88 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 99.88 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.86 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.86 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.85 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.84 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.84 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 99.83 | |
| PLN02423 | 245 | phosphomannomutase | 99.82 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.81 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.8 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 99.76 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.74 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.74 | |
| PLN03017 | 366 | trehalose-phosphatase | 99.73 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.73 | |
| PLN02580 | 384 | trehalose-phosphatase | 99.73 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.72 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.71 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.68 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.68 | |
| PLN02151 | 354 | trehalose-phosphatase | 99.66 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.64 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 99.57 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 99.57 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.56 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 99.56 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.53 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.41 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 99.36 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.34 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 99.27 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 99.26 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.25 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.25 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.2 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 99.16 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 99.08 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.06 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.02 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.98 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 98.93 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.84 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 98.8 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.8 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 98.78 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 98.74 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.69 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 98.6 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 98.56 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.55 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 98.5 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.48 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 98.43 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.32 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 98.31 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 98.23 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 98.22 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.14 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.13 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 98.12 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 98.08 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 98.06 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 98.03 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 98.01 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 98.01 | |
| PF03332 | 220 | PMM: Eukaryotic phosphomannomutase; InterPro: IPR0 | 97.97 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 97.92 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 97.87 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 97.87 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 97.83 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.78 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 97.75 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 97.75 | |
| PLN02208 | 442 | glycosyltransferase family protein | 97.67 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 97.63 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 97.63 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 97.4 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 97.38 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 97.35 | |
| PLN00414 | 446 | glycosyltransferase family protein | 97.32 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 97.32 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 97.3 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 97.28 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 97.23 | |
| PF11997 | 268 | DUF3492: Domain of unknown function (DUF3492); Int | 97.2 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 97.2 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 97.19 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 97.14 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 97.07 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 97.07 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 97.04 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 97.03 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 97.01 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 96.99 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 96.96 | |
| PF09210 | 102 | DUF1957: Domain of unknown function (DUF1957); Int | 96.95 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 96.93 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 96.9 | |
| PF08550 | 29 | DUF1752: Fungal protein of unknown function (DUF17 | 96.9 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 96.89 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 96.87 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.83 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 96.8 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 96.79 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 96.71 | |
| PLN02764 | 453 | glycosyltransferase family protein | 96.67 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 96.67 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 96.67 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 96.65 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 96.64 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 96.59 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 96.58 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 96.58 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 96.57 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 96.56 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 96.56 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 96.56 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 96.42 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 96.41 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.39 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.39 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 96.35 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 96.34 | |
| PRK08238 | 479 | hypothetical protein; Validated | 96.32 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 96.3 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 96.28 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 96.17 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 96.12 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 96.09 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 96.01 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 95.98 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 95.96 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.87 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 95.86 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 95.83 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 95.82 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 95.69 | |
| PF12038 | 168 | DUF3524: Domain of unknown function (DUF3524); Int | 95.6 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 95.59 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 95.57 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 95.48 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 95.42 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 95.42 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 95.41 | |
| PF08288 | 90 | PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP | 95.17 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 95.09 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 95.06 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 95.06 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 95.02 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 94.93 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 94.85 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 94.73 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 94.69 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 94.67 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 94.58 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 94.39 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 94.19 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 94.18 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 94.17 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 94.12 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 93.81 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 93.76 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 93.75 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 93.69 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 93.57 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 93.49 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 93.46 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 93.42 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 93.32 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 93.26 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 93.2 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 92.95 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 92.92 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 92.78 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 92.76 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 92.75 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 92.64 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 92.64 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 92.55 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 92.42 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 92.24 | |
| PF11440 | 355 | AGT: DNA alpha-glucosyltransferase; InterPro: IPR0 | 91.69 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 91.34 | |
| PF06437 | 408 | ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0 | 91.15 | |
| PLN02940 | 382 | riboflavin kinase | 91.11 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 91.07 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 90.88 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 90.86 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 90.5 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 90.26 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 89.93 | |
| PF03033 | 139 | Glyco_transf_28: Glycosyltransferase family 28 N-t | 89.84 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 89.68 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 89.54 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 89.44 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 89.11 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 89.08 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 89.01 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 88.63 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 88.45 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 88.23 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 87.34 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 87.3 | |
| PRK06769 | 173 | hypothetical protein; Validated | 87.29 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 86.89 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 86.79 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 85.58 | |
| PLN02954 | 224 | phosphoserine phosphatase | 85.47 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 84.65 | |
| COG4370 | 412 | Uncharacterized protein conserved in bacteria [Fun | 84.59 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 84.58 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 84.43 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 83.59 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 83.53 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 82.95 | |
| PF04413 | 186 | Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid | 82.66 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 82.66 | |
| COG2327 | 385 | WcaK Polysaccharide pyruvyl transferase family pro | 82.13 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 80.65 |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-196 Score=1773.54 Aligned_cols=1003 Identities=62% Similarity=1.021 Sum_probs=896.2
Q ss_pred CCCCchhhhHHHHHHhcCCCCCccccCccccchhhhhhhhcCCCCCcchhhHHHHhccCCcchhhhhHHHHHHhcchhhh
Q 001705 1 MAGNEWINGYLEAILDAGSGKTKMNDGKFKLSKFEETKQKEGQLFSPTKYFVEEVINSFDESDLHRTWVKVIATRNTRER 80 (1024)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (1024)
||||||||||||||||+|+|++ +++++. .+++||+|+||||||||||||||||||||||||+||+||||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (1050)
T TIGR02468 1 MAGNDWINSYLEAILDVGPGLD--DAKSSA-----LLLLRERGRFSPTRYFVEEVITGFDETDLHRTWVKAVATRSPQER 73 (1050)
T ss_pred CCcchHHHHHHHHHHhcCCCcc--cccccc-----cccccccCccCCceeeEEeecccccchhhhhHHHHHHhhcChhhh
Confidence 9999999999999999999977 566652 267899999999999999999999999999999999999999999
Q ss_pred hhhhhhhhHHHHHHhhhhhhhchHHHHHHHHHHHHHHhcCccccccccc-cCcccccc--CCCC-Cccc--ccCcccccc
Q 001705 81 SNRLENMCWRIWHLARKKKQIAWEDAQRLAKRRLEREQGRNDAADDLSE-LSEGEKEK--GDSI-NASE--SLKEIPRIN 154 (1024)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~-~~~~--~~~~~~~~~ 154 (1024)
||||||||||||||||||||+|||+|||+|+||+|+|+||+++++|||| ||||||+| ++++ +.+. .+++||||+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (1050)
T TIGR02468 74 NTRLENMCWRIWNLARKKKQLEWEEAQRLAKRRLERERGRREATADMSEDLSEGEKGDVAGDISVAGGEPSTKGRLPRIS 153 (1050)
T ss_pred hhhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhHhhcCCcccCcccccccccCCCcccccccccc
Confidence 9999999999999999999999999999999999999999999999999 99999999 7887 4443 468999999
Q ss_pred c--ccccccccccCCCceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcc
Q 001705 155 S--DMQIWSEDDKSSRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSS 232 (1024)
Q Consensus 155 ~--~~~~~~~~~~~~~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~ 232 (1024)
| .|+.|++++ +.++|||+|||.||++||+||++||++|+|||..||++||++|+++||||+|+||||+..+|.++++
T Consensus 154 ~~~~~~~~~~~~-~~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~ 232 (1050)
T TIGR02468 154 SNLEMETWSDQQ-KEKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWS 232 (1050)
T ss_pred ccchhhcchhhc-ccCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccc
Confidence 9 688999999 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccCCCCCC------CCCCCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcce
Q 001705 233 YGEPNEMLSCPSDG------TGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPY 306 (1024)
Q Consensus 233 y~~~~e~l~~~~~~------~~~~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pD 306 (1024)
|++++|++.+.+++ ...+|++|+|+|+||.++|++|+.+|||+..|.+.++.++.++.+++.+++..+++.+||
T Consensus 233 y~~p~e~~~~~~~~~~~~~~~~~~g~rIvRip~GP~~~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pD 312 (1050)
T TIGR02468 233 YGEPTEMLTPRSSENDGDEMGESSGAYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPY 312 (1050)
T ss_pred cCCccccccccccccccccccCCCCeEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCC
Confidence 99999988653221 467899999999999977999999999999999999999999999999998877777899
Q ss_pred EEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCc-chhhHHHHHHHHHHHHHhhhcCCEEEeCCHHH
Q 001705 307 VIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPK-DINASYKIMRRIEAEELGLDASEMVVTSTRQE 385 (1024)
Q Consensus 307 vIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~-~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~ 385 (1024)
|||+|||+.+++++++++.+++|+|+|+|++++.++.+++.+|.... .+...|++.+++..|+.++..||.||++|+++
T Consensus 313 vIHaHyw~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE 392 (1050)
T TIGR02468 313 VIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQE 392 (1050)
T ss_pred EEEECcchHHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHH
Confidence 99999999999999999999999999999999999999999997554 67788999999999999999999999999999
Q ss_pred HHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcch
Q 001705 386 IEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMW 465 (1024)
Q Consensus 386 ~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 465 (1024)
+++||.+|+.|.+.++|+|+++.++|+.|||++++++.|||||||++.|.|... +.+......-. ....+.|.++
T Consensus 393 ~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~-~~~~~~~~~~~----~~~~~~~~~~ 467 (1050)
T TIGR02468 393 IEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDG-DMDGETEGNEE----HPAKPDPPIW 467 (1050)
T ss_pred HHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCc-cccchhccccc----ccccccchhh
Confidence 999999999999999999999999999999999999999999999999998652 11111000000 1124467788
Q ss_pred HHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCC
Q 001705 466 SEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLY 545 (1024)
Q Consensus 466 ~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~ 545 (1024)
..+++++..+++|+|+++||+++.||++.||+||..++.+.+.+++.+|+|++++.+++..+..++..++.++++++++.
T Consensus 468 ~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~ 547 (1050)
T TIGR02468 468 SEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLY 547 (1050)
T ss_pred HHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEEEEEecCchhhhhhccchHHHHHHHHHHHHhCCC
Confidence 89999999999999999999999999999999999997555667888888999888888777788899999999999999
Q ss_pred CCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHH
Q 001705 546 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAI 625 (1024)
Q Consensus 546 ~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~l 625 (1024)
++|.|+|+++.++++++|+.|+.++|+||+||++||||++++||||||+|||+|+.||+.|++.++.+|++|+|.|+++|
T Consensus 548 g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGlLVdP~D~eaL 627 (1050)
T TIGR02468 548 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQQAI 627 (1050)
T ss_pred CeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEEEECCCCHHHH
Confidence 99999999999999999999977778999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhcCCCCCccc----cCCCCCCCCCccccccccccc
Q 001705 626 ADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNRHPNSHLEI----MTIPGEPLSDSLRDVEDFSLR 701 (1024)
Q Consensus 626 a~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~d~s~~ 701 (1024)
|++|.++++++++++++++++++.+++|+|+.++++|++.+..+..++|+|+... .+++++++.+++++++||||+
T Consensus 628 A~AL~~LL~Dpelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 707 (1050)
T TIGR02468 628 ADALLKLVADKQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEASEDESPGDSLRDIQDISLN 707 (1050)
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccCcccccccccccccccccCccccccccccchhh
Confidence 9999999999999999999999999889999999999999999999999988632 145567889999999999999
Q ss_pred cccccccccch-------hhhHHHHHHHHHHHH---hhhcc-cCC----CCCCCCCC--cccceeEEEEEecCCCCCCCc
Q 001705 702 FSMEGDFKLNA-------ELDAVTRQKNLIEAI---TQKAS-FNG----NASVTHSP--GRRQMLIVIAADCYDSDGNTT 764 (1024)
Q Consensus 702 ~s~~~~~~~~~-------~~~~~~~~~~~~~~~---~~~~~-~~~----~~~~~~~~--~~~~rlllIa~DlDGTl~~~~ 764 (1024)
||+||++..++ +.++.++..++.+.+ +++.. +.+ +++.++|| ++++++++||+|+|.|++
T Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~D~d~~~~--- 784 (1050)
T TIGR02468 708 LSVDGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPKGSSAKAQQGSGAGKYPALRRRKRLFVIAVDCYDDKD--- 784 (1050)
T ss_pred ccccccccccccccccccccchhhHHHHHHHHHhhccccccccccccccccccccCccccccceEEEEEeccCCCCC---
Confidence 99999955421 233334444444444 33331 111 26778887 889999999999999933
Q ss_pred hhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcC------CCccccCcch
Q 001705 765 ETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFP------WRDMVADGDY 838 (1024)
Q Consensus 765 ~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~------~~~~~~d~~~ 838 (1024)
..+.++++++++++....+.+.|+++|||++.++..++.+.++++.+||++||+.|++|||+ ++.+..|..|
T Consensus 785 --~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w 862 (1050)
T TIGR02468 785 --LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQDY 862 (1050)
T ss_pred --hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCcceeccCcCCCCCCCceECHHH
Confidence 44666777777764323356999999999999999999999997558999999999999997 2468899999
Q ss_pred hhhhcccCCchhHHHHHhhhhhccCCCC-----cccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEEEEe
Q 001705 839 EAHVEYRWPGENVRSVVPRVARAEDGAE-----DDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYT 913 (1024)
Q Consensus 839 ~~~i~~~w~~~~v~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s 913 (1024)
..||.++|.++.+++++..+......++ .+.+++...+..||++|++.++...+.+++|++.|++++++|++++|
T Consensus 863 ~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~SY~v~d~~~~~~v~elr~~Lr~~gLr~~~iys 942 (1050)
T TIGR02468 863 HSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDHCYAFKVKDPSKVPPVKELRKLLRIQGLRCHAVYC 942 (1050)
T ss_pred HHHHHccCCcHHHHHHHHHHhhhcccccccccccceecChhhCCCceEEEEecCcccCccHHHHHHHHHhCCCceEEEee
Confidence 9999999999999999888877432111 16778888999999999987888888899999999999999999999
Q ss_pred cCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCC
Q 001705 914 RAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKRED 993 (1024)
Q Consensus 914 ~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~ 993 (1024)
+++++|||+|.++|||+||+||+.+|||++++|++|+||++||||++||.+.+++|+++|+++.+++++. +.++|+++|
T Consensus 943 ~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~g~~~~~s~~l~-~~~sY~~eD 1021 (1050)
T TIGR02468 943 RNGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKGVVSRGSEQLH-ANRSYPLDD 1021 (1050)
T ss_pred cCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEecccccchhhhc-ccCCCcccc
Confidence 9866999999999999999999999999999999988999999999999999999999999988887765 999999999
Q ss_pred ccCCCCCCeeEeccccChhHHHHHHHhcc
Q 001705 994 VVPPDSPNIAYIEESYEPQDLSAALKAIK 1022 (1024)
Q Consensus 994 v~~~~~~~~~~vt~~~~~dgI~~aL~~~~ 1022 (1024)
|||+|||||+++.++|..++|..||+++|
T Consensus 1022 Vvp~dspni~~~~~~~~~~di~~aL~~l~ 1050 (1050)
T TIGR02468 1022 VVPLDSPNIVQATGGSSSDDISDALKKLS 1050 (1050)
T ss_pred cccCCCCCeEeecCCCCHHHHHHHHHhcC
Confidence 99999999999988999999999999986
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-58 Score=571.27 Aligned_cols=603 Identities=16% Similarity=0.207 Sum_probs=435.2
Q ss_pred CeEEEEecCCCC-----CCccccccCCcchHHHHH----------HHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCh
Q 001705 251 GAYIIRIPCGAR-----DKYIAKESLWPYIHEFVD----------GALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADA 315 (1024)
Q Consensus 251 gv~i~rip~~~~-----~~~~~k~~lwp~~~~f~~----------~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~ 315 (1024)
+...+.++..+. ..+++|..+||.+|++.+ .....++.|++.+.++++++ |+||+|++++
T Consensus 70 ~~~~~~v~l~~~~~~~~y~gf~n~~lWp~~H~~~~~~~~~~~~w~~Y~~vN~~fA~~~~~~~~~~-----d~vwvhDYhl 144 (726)
T PRK14501 70 ELGLVPVFLSAEEVDRYYEGFCNSTLWPLFHYFPEYTEFEDRFWESYERVNQRFAEAIAAIARPG-----DVVWVHDYQL 144 (726)
T ss_pred CceEEEEeCCHHHHHHHHHHhhhccccchhcccCcccCcCHHHHHHHHHHHHHHHHHHHHhcCCC-----CEEEEeCchh
Confidence 455666554331 246899999999986443 23344577888888888775 9999999999
Q ss_pred HHHHHHHHccC-CCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhh---cCCEEEeCCHHHHHHHHh
Q 001705 316 GEVAAHLSGAL-NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLD---ASEMVVTSTRQEIEMQWG 391 (1024)
Q Consensus 316 ~~~a~~l~~~~-~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~---~Ad~Vi~~S~~~~~~~~~ 391 (1024)
.+++.+++++. ..++.|+.| .+++...+++.+++.+.+++ ++|+|.++|..++++
T Consensus 145 ~l~p~~lr~~~~~~~igfFlH------------------~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~--- 203 (726)
T PRK14501 145 MLLPAMLRERLPDARIGFFLH------------------IPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRH--- 203 (726)
T ss_pred hhHHHHHHhhCCCCcEEEEee------------------CCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHH---
Confidence 99999999775 689999999 55666677777777665555 999999999999887
Q ss_pred cccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhh
Q 001705 392 LYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRF 471 (1024)
Q Consensus 392 ~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 471 (1024)
|...+.++++.....+...++.+..++.++|+|||++.|.+... .+.......++
T Consensus 204 ----Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~---------------------~~~~~~~~~~l 258 (726)
T PRK14501 204 ----FLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQ---------------------DPEVQEEIRRL 258 (726)
T ss_pred ----HHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhc---------------------CchHHHHHHHH
Confidence 66677777765544333334444458999999999999976542 11111111111
Q ss_pred h-CCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCc----EEE-EEec----C-CCcccccccchHHHHHHHHHHH
Q 001705 472 F-TNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELAN----MTL-ILGN----R-DDIEDMSNSSSVVLTTVLKLID 540 (1024)
Q Consensus 472 ~-~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~L-IvG~----~-~~~~~l~~~~~~~~~~i~~~i~ 540 (1024)
. ..+++++|+++||+++.||+..+++||+.+. +.+|+ ++| ++|. + ++++++.....+..++|+...+
T Consensus 259 r~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll--~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~ 336 (726)
T PRK14501 259 RQDLRGRKIILSIDRLDYTKGIPRRLLAFERFL--EKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFG 336 (726)
T ss_pred HHHcCCCEEEEEecCcccccCHHHHHHHHHHHH--HhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcC
Confidence 1 1357789999999999999999999999984 44453 444 4442 2 3444555445555555565556
Q ss_pred HcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc-----CCcEEEcCCCCchhhhccCCcEE
Q 001705 541 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAY-----GLPVVATKNGGPVDILKALNNGL 615 (1024)
Q Consensus 541 ~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~-----G~PVVat~~Gg~~eii~~~~~Gl 615 (1024)
..++.+.++|.|++++++++++|+.| |+||+||++||||++++||||| |+||+++..|++.+++ .|+
T Consensus 337 ~~~~~pv~~~~~~~~~~~l~~ly~~a----Dv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~----~~l 408 (726)
T PRK14501 337 TVDWTPIHYFYRSLPFEELVALYRAA----DVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA----EAL 408 (726)
T ss_pred CCCcceEEEEeCCCCHHHHHHHHHhc----cEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHhC----cCe
Confidence 66677778899999999999999999 9999999999999999999999 6688888899998884 499
Q ss_pred EeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCCcccc
Q 001705 616 LVDPHDQNAIADALLKLLADK-NMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNRHPNSHLEIMTIPGEPLSDSLRD 694 (1024)
Q Consensus 616 lv~p~d~~~la~aI~~ll~d~-~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 694 (1024)
+|+|+|++++|++|.++++++ +++++...++++.+.+|||..|+++|++.|.++...+....... -.
T Consensus 409 lv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~~~~~~~~~--------~~---- 476 (726)
T PRK14501 409 LVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKAFASKP--------IT---- 476 (726)
T ss_pred EECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhcccccc--------CC----
Confidence 999999999999999999975 45555566788888999999999999999998865432211100 00
Q ss_pred ccccccccccccccccchhhhHHHHHHHHHHHHhhhcccCCCCCCCCCCcccceeEEEEEecCCCCCCC-----chhhHH
Q 001705 695 VEDFSLRFSMEGDFKLNAELDAVTRQKNLIEAITQKASFNGNASVTHSPGRRQMLIVIAADCYDSDGNT-----TETFQA 769 (1024)
Q Consensus 695 ~~d~s~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rlllIa~DlDGTl~~~-----~~~i~~ 769 (1024)
....+.++.++ ..+.+|+++ +|+||||.+. ...+++
T Consensus 477 ----------------------~~~~~~~~~~y---------------~~~~~rLi~--~D~DGTL~~~~~~~~~~~~~~ 517 (726)
T PRK14501 477 ----------------------PAAAEEIIARY---------------RAASRRLLL--LDYDGTLVPFAPDPELAVPDK 517 (726)
T ss_pred ----------------------ccCHHHHHHHH---------------HhccceEEE--EecCccccCCCCCcccCCCCH
Confidence 00112233444 234455444 9999997652 245789
Q ss_pred HHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCCccccCcchhhh--hcccCC
Q 001705 770 TIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYEAH--VEYRWP 847 (1024)
Q Consensus 770 ~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~~~~~d~~~~~~--i~~~w~ 847 (1024)
.++++|++|.++ +|+.|+|+|||++..+.+++..+++ ++|++||++++.+++ .|... ....|.
T Consensus 518 ~~~~~L~~L~~d---~g~~V~ivSGR~~~~l~~~~~~~~l------~liaenG~~i~~~~~------~w~~~~~~~~~w~ 582 (726)
T PRK14501 518 ELRDLLRRLAAD---PNTDVAIISGRDRDTLERWFGDLPI------HLVAEHGAWSRAPGG------EWQLLEPVATEWK 582 (726)
T ss_pred HHHHHHHHHHcC---CCCeEEEEeCCCHHHHHHHhCCCCe------EEEEeCCEEEeCCCC------ceEECCCcchhHH
Confidence 999999999986 6999999999999999999987544 699999999986532 23221 133453
Q ss_pred chhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCc---hhhHHHHHHHHHhc--CCeEEEEEecCCeEEEEe
Q 001705 848 GENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAE---TRKVDNIRQRLRMR--GFRCNLVYTRAGSRLNVV 922 (1024)
Q Consensus 848 ~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~---~~~~~el~~~L~~~--~~~~~v~~s~~~~~lEI~ 922 (1024)
+.+..++..+....++ ... +....++++++.+.+. ....+++.+.+... ...+.++ +++ .++||+
T Consensus 583 -~~v~~il~~~~~~~~g---s~i----e~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~-~g~-~~veV~ 652 (726)
T PRK14501 583 -DAVRPILEEFVDRTPG---SFI----EEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVL-RGN-KVVEVR 652 (726)
T ss_pred -HHHHHHHHHHHhcCCC---cEE----EEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEE-ECC-eEEEEE
Confidence 6677777766654332 122 2233667777654321 12234566666542 2234333 344 499999
Q ss_pred cCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCC---CceEEecCCCCCChHHHhcccccCCCCCccCCCC
Q 001705 923 PSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGL---HKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDS 999 (1024)
Q Consensus 923 p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~a---g~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~ 999 (1024)
|+++|||.|++.|++ +++++.+++| ||+.| | ++||+.+ +++|+|| |+ +.+|+
T Consensus 653 p~~vnKG~al~~ll~--~~~~d~vl~~-GD~~n-D-e~Mf~~~~~~~~~v~vG----~~----~s~A~------------ 707 (726)
T PRK14501 653 PAGVNKGRAVRRLLE--AGPYDFVLAI-GDDTT-D-EDMFRALPETAITVKVG----PG----ESRAR------------ 707 (726)
T ss_pred ECCCCHHHHHHHHHh--cCCCCEEEEE-CCCCC-h-HHHHHhcccCceEEEEC----CC----CCcce------------
Confidence 999999999999999 7888889997 99999 9 9999986 7999999 65 34556
Q ss_pred CCeeEeccccChhHHHHHHHhc
Q 001705 1000 PNIAYIEESYEPQDLSAALKAI 1021 (1024)
Q Consensus 1000 ~~~~~vt~~~~~dgI~~aL~~~ 1021 (1024)
|...++ ++++..|+.+
T Consensus 708 ----~~l~~~--~eV~~~L~~l 723 (726)
T PRK14501 708 ----YRLPSQ--REVRELLRRL 723 (726)
T ss_pred ----EeCCCH--HHHHHHHHHH
Confidence 565544 5688888765
|
|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-56 Score=535.53 Aligned_cols=459 Identities=28% Similarity=0.525 Sum_probs=357.0
Q ss_pred CCCceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHH--------HcCCCce----EEEEEecCCCCCCCCccc
Q 001705 166 SSRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARAL--------ANTEGVY----RVDLLTRQIASPEVDSSY 233 (1024)
Q Consensus 166 ~~~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aL--------a~~g~v~----~V~vlt~~~~~p~~~~~y 233 (1024)
.+|.|||+|||+||+++.+++ +|+ +|+||+..||.+||++| +++| | +|+|+||.+.+.. ...|
T Consensus 252 ~p~~~rIa~lS~Hg~~~~~~~-lG~-~DtGGq~vYV~elaraL~~~~~~~La~~G--~~v~~~V~I~TR~~~~~~-~~~~ 326 (784)
T TIGR02470 252 IPMVFNVVILSPHGYFGQENV-LGL-PDTGGQVVYILDQVRALENEMLQRIKLQG--LEITPKILIVTRLIPDAE-GTTC 326 (784)
T ss_pred CCccceEEEEecccccCCccc-cCC-CCCCCceeHHHHHHHHHHHHHHHHHHhcC--CCccceEEEEecCCCCcc-cccc
Confidence 368899999999999888885 996 69999999999999985 6888 8 8889999986543 3345
Q ss_pred CCCccccCCCCCCCCCCCeEEEEecCCCCC-----CccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEE
Q 001705 234 GEPNEMLSCPSDGTGSCGAYIIRIPCGARD-----KYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVI 308 (1024)
Q Consensus 234 ~~~~e~l~~~~~~~~~~gv~i~rip~~~~~-----~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvI 308 (1024)
.++.+.+ ...+|++|+|+|++|.. +|++|+.+|||+..|.+.+...+.+- .+.+||+|
T Consensus 327 ~~~~e~~------~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~-----------~~~~pDlI 389 (784)
T TIGR02470 327 NQRLEKV------YGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAE-----------LQGKPDLI 389 (784)
T ss_pred ccccccc------cCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-----------cCCCCCEE
Confidence 5665554 44579999999999852 57999999999999999887766431 11479999
Q ss_pred EEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHH-
Q 001705 309 HGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIE- 387 (1024)
Q Consensus 309 h~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~- 387 (1024)
|+|||+.++++.++++.+++|+++|.|+++..++ ...|..+..+...|++..++..|..++..||.||++|.+++.
T Consensus 390 Hahy~d~glva~lla~~lgVP~v~t~HsL~~~K~---~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~ 466 (784)
T TIGR02470 390 IGNYSDGNLVASLLARKLGVTQCTIAHALEKTKY---PDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAG 466 (784)
T ss_pred EECCCchHHHHHHHHHhcCCCEEEECCcchhhcc---cccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhh
Confidence 9999999999999999999999999999977764 234544445667888888898899999999999999998866
Q ss_pred -----HHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCC-----ccccccccCccccc
Q 001705 388 -----MQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGD-----TDLKSLIGNDRTQS 457 (1024)
Q Consensus 388 -----~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~-----~~~~~~~~~~~~~~ 457 (1024)
.||+.|..|... .+ +++..|+ +.+.+|+.|||||+|.+.|.|....... ..+..++
T Consensus 467 ~~~~v~qY~s~~~ft~p--~L--y~vvnGi---d~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll------- 532 (784)
T TIGR02470 467 TKDSVGQYESHQAFTMP--GL--YRVVHGI---DVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELL------- 532 (784)
T ss_pred hhhhhhhhhhccccccc--ce--eeeecCc---cCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhc-------
Confidence 355555544421 00 0112232 2355699999999999999775520000 0000000
Q ss_pred cCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCC-cccccccchHHHHHHH
Q 001705 458 KRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDD-IEDMSNSSSVVLTTVL 536 (1024)
Q Consensus 458 ~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~-~~~l~~~~~~~~~~i~ 536 (1024)
..+........+...+++|+|+++||+++.||++.|++||.++..+++..+++ |+|++.+ ......+......++.
T Consensus 533 --~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LV-IVGGg~~~~~s~d~ee~~~i~~L~ 609 (784)
T TIGR02470 533 --FSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLV-VVAGKLDAKESKDREEQAEIEKMH 609 (784)
T ss_pred --cchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEE-EEeCCcccccccchhHHHHHHHHH
Confidence 01111112222333678999999999999999999999999876555555553 5555432 2222223335678899
Q ss_pred HHHHHcCCCCCEEeCCCC-CCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEE
Q 001705 537 KLIDKYDLYGQVAYPKHH-KQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGL 615 (1024)
Q Consensus 537 ~~i~~~~l~~~V~~~g~~-~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gl 615 (1024)
.+++++++.++|.|+|.. +..++.++|+.++.++|+||+||++|+||++++||||||+|||+|+.||+.|+|.++.+|+
T Consensus 610 ~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGf 689 (784)
T TIGR02470 610 NLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGF 689 (784)
T ss_pred HHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEE
Confidence 999999999999999975 6778999998654455899999999999999999999999999999999999999999999
Q ss_pred EeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHH
Q 001705 616 LVDPHDQNAIADALLKLL----ADKNMWSECRKNGLKNI-HRFSWPEHCRNYLSHV 666 (1024)
Q Consensus 616 lv~p~d~~~la~aI~~ll----~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~ 666 (1024)
+|+|.|+++++++|.+++ +||+.|+++++++++.+ ++|||+.++++++++.
T Consensus 690 LVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 690 HIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred EeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999999999876 69999999999999998 7999999999999886
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-54 Score=522.70 Aligned_cols=462 Identities=28% Similarity=0.495 Sum_probs=349.0
Q ss_pred CCceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHH--------HHHHcCCCceEE----EEEecCCCCCCCCcccC
Q 001705 167 SRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELA--------RALANTEGVYRV----DLLTRQIASPEVDSSYG 234 (1024)
Q Consensus 167 ~~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La--------~aLa~~g~v~~V----~vlt~~~~~p~~~~~y~ 234 (1024)
+|-|||++||.||++++.++ +|+ +|||||..||.+|| ++|+++| |+| +|+||.+.+.. ...|.
T Consensus 277 p~~~~i~~iS~Hg~~~~~~~-lG~-~DtGGQ~vYVl~~aral~~el~~~l~~~G--~~v~~~v~i~TR~i~~~~-~~~~~ 351 (815)
T PLN00142 277 PMVFNVVIFSPHGYFGQANV-LGL-PDTGGQVVYILDQVRALENEMLLRIKQQG--LDIKPQILIVTRLIPDAK-GTTCN 351 (815)
T ss_pred hHhHhhheeccccccccccc-CCC-CCCCCceehHHHHHHHHHHHHHHHHHhcC--CCccceeEEEEeccCCcc-CCccc
Confidence 57799999999999999995 997 99999999999777 5666778 755 69999987655 45567
Q ss_pred CCccccCCCCCCCCCCCeEEEEecCCCCC----CccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEE
Q 001705 235 EPNEMLSCPSDGTGSCGAYIIRIPCGARD----KYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHG 310 (1024)
Q Consensus 235 ~~~e~l~~~~~~~~~~gv~i~rip~~~~~----~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~ 310 (1024)
++.+.+ ...++++|+|+|+||.+ .+++|+.+|||+..|.+.+..++.+- ...+||+||+
T Consensus 352 ~~~e~v------~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~~~~-----------~~~~PDlIHa 414 (815)
T PLN00142 352 QRLEKV------SGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEILAE-----------LQGKPDLIIG 414 (815)
T ss_pred Ccceec------cCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHHHHh-----------cCCCCCEEEE
Confidence 776655 44569999999999953 56799999999999999888776431 1147999999
Q ss_pred cCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHH---
Q 001705 311 HYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIE--- 387 (1024)
Q Consensus 311 h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~--- 387 (1024)
|||+.+++|..+++.+|+|+|+|.|+++..++. .+|.....+...|++..++..|..++..||.||++|.+++.
T Consensus 415 HYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~---~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT~qEi~g~~ 491 (815)
T PLN00142 415 NYSDGNLVASLLAHKLGVTQCTIAHALEKTKYP---DSDIYWKKFDDKYHFSCQFTADLIAMNHADFIITSTYQEIAGSK 491 (815)
T ss_pred CCccHHHHHHHHHHHhCCCEEEEcccchhhhcc---ccCCcccccchhhhhhhchHHHHHHHHhhhHHHhCcHHHHhccc
Confidence 999999999999999999999999999887763 34554446777888888999999999999999999999886
Q ss_pred ---HHHhcccCcch-HHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCc
Q 001705 388 ---MQWGLYDGFDL-KLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPP 463 (1024)
Q Consensus 388 ---~~~~~~~~f~~-~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 463 (1024)
.|+..|..|.. .+ +++-.|+. .+.+++.|||||+|...|.|.... ...+....+ ......-.+.
T Consensus 492 ~~i~qy~sh~~f~~p~L-----~rvv~GId---~~~~ki~VVppGvD~~~F~P~~~~--~~rl~~l~n--~I~~~l~~~~ 559 (815)
T PLN00142 492 DTVGQYESHTAFTLPGL-----YRVVHGID---VFDPKFNIVSPGADMSIYFPYTEK--QKRLTSLHP--SIEELLYSPE 559 (815)
T ss_pred chhhhhhcccccccchh-----hhhhcccc---ccccCeeEECCCCChhhcCCCChH--HhhHHhhcc--cchhhcCChH
Confidence 34444444432 22 23334442 345599999999999998765410 000000000 0000000111
Q ss_pred chHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecC-CCcccccccchHHHHHHHHHHHHc
Q 001705 464 MWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNR-DDIEDMSNSSSVVLTTVLKLIDKY 542 (1024)
Q Consensus 464 ~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~-~~~~~l~~~~~~~~~~i~~~i~~~ 542 (1024)
.......+...+++|+|+++||+++.||++.|++|+.++..+.+..++ +|+|++ +.......+......++.++++++
T Consensus 560 ~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~L-VIVGgg~d~~~s~d~ee~~el~~L~~La~~l 638 (815)
T PLN00142 560 QNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNL-VVVGGFIDPSKSKDREEIAEIKKMHSLIEKY 638 (815)
T ss_pred HHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEE-EEEECCccccccccHHHHHHHHHHHHHHHHc
Confidence 111112222356788999999999999999999999988644433444 356665 211111112223457788999999
Q ss_pred CCCCCEEeCCCCC-CCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCC
Q 001705 543 DLYGQVAYPKHHK-QSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHD 621 (1024)
Q Consensus 543 ~l~~~V~~~g~~~-~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d 621 (1024)
++.++|.|+|... ..+..++|+..+.++|+||+||++||||++++||||||+|||+|+.||+.|+|.++.+|++|+|+|
T Consensus 639 gL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D 718 (815)
T PLN00142 639 NLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYH 718 (815)
T ss_pred CCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCC
Confidence 9999999998654 334455555322223999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH----HhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHH
Q 001705 622 QNAIADALLKL----LADKNMWSECRKNGLKNI-HRFSWPEHCRNYLSHV 666 (1024)
Q Consensus 622 ~~~la~aI~~l----l~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~ 666 (1024)
+++++++|.++ ++|++.|++++++|++.+ ++|||+.++++++++.
T Consensus 719 ~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 719 GDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 99999998765 469999999999999998 7999999999999876
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-54 Score=532.22 Aligned_cols=567 Identities=14% Similarity=0.139 Sum_probs=413.9
Q ss_pred CccccccCCcchHHH-----------------HHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccC
Q 001705 264 KYIAKESLWPYIHEF-----------------VDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGAL 326 (1024)
Q Consensus 264 ~~~~k~~lwp~~~~f-----------------~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~ 326 (1024)
.+++|..|||.+|++ .......++.|++.+.+.+.+| |+||+|++++.+++.++++..
T Consensus 95 ~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~-----d~vWvhDYhL~llp~~lR~~~ 169 (797)
T PLN03063 95 NGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEEG-----DVVWCHDYHLMFLPQYLKEYN 169 (797)
T ss_pred HHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCC-----CEEEEecchhhhHHHHHHHhC
Confidence 468999999999986 1122233467888888888765 999999999999999999875
Q ss_pred -CCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhh---cCCEEEeCCHHHHHHHHhcccCcchHHHH
Q 001705 327 -NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLD---ASEMVVTSTRQEIEMQWGLYDGFDLKLER 402 (1024)
Q Consensus 327 -~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~---~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r 402 (1024)
+++++|++| .+++.+.+++.+++.+.+++ +||+|.++|..++++ |...+.+
T Consensus 170 ~~~~igfFlH------------------iPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~-------Fl~~~~r 224 (797)
T PLN03063 170 NKMKVGWFLH------------------TPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARH-------FLSACTR 224 (797)
T ss_pred CCCcEEEEec------------------CCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHH-------HHHHHHH
Confidence 789999999 77888889998888776665 999999999999998 6666777
Q ss_pred HHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhh-CCCCCcEEE
Q 001705 403 KLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFF-TNPHKPTIL 481 (1024)
Q Consensus 403 ~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~Il 481 (1024)
+|+......-..++.+..++.+||+|||+..|.+... .+...+....+. ..+++++|+
T Consensus 225 ~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~---------------------~~~~~~~~~~lr~~~~~~~lIl 283 (797)
T PLN03063 225 ILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCE---------------------LPEVKQHMKELKRFFAGRKVIL 283 (797)
T ss_pred HhCccccCCceEECCeEEEEEEEecccCHHHHHHHhc---------------------ChhHHHHHHHHHHhcCCCeEEE
Confidence 7775544332333344458999999999998865431 111111111111 124688999
Q ss_pred EEeCCCCCCCHHHHHHHHhhccccCCCCc----EEEEE------ecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeC
Q 001705 482 ALSRPDPKKNVTTLLKAFGECQPLRELAN----MTLIL------GNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYP 551 (1024)
Q Consensus 482 ~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~LIv------G~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~ 551 (1024)
++||+++.||+..+++||+.+. ..+|+ ++|+. |+++.+++++....+..++|+..+...++.+.+++.
T Consensus 284 ~VgRLd~~KGi~~lL~Afe~lL--~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~ 361 (797)
T PLN03063 284 GVDRLDMIKGIPQKYLAFEKFL--EENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLD 361 (797)
T ss_pred EecccccccCHHHHHHHHHHHH--HhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEec
Confidence 9999999999999999999984 44453 44442 233444455444444444455555555677777788
Q ss_pred CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCc----EEEcCCCCchhhhccCCcEEEeCCCCHHHHHH
Q 001705 552 KHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLP----VVATKNGGPVDILKALNNGLLVDPHDQNAIAD 627 (1024)
Q Consensus 552 g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~P----VVat~~Gg~~eii~~~~~Gllv~p~d~~~la~ 627 (1024)
++++.+++.++|+.| ||||+||++||||++++||||||+| +|+|..+|..+.+ +.+|++|+|+|++++|+
T Consensus 362 ~~v~~~el~aly~~A----DvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l--~~~allVnP~D~~~lA~ 435 (797)
T PLN03063 362 CSVDFNYLCALYAIT----DVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL--GAGALLVNPWNITEVSS 435 (797)
T ss_pred CCCCHHHHHHHHHhC----CEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhhh--cCCeEEECCCCHHHHHH
Confidence 899999999999999 9999999999999999999999999 9999888888875 45799999999999999
Q ss_pred HHHHHHh-CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCCcccccccccccccccc
Q 001705 628 ALLKLLA-DKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNRHPNSHLEIMTIPGEPLSDSLRDVEDFSLRFSMEG 706 (1024)
Q Consensus 628 aI~~ll~-d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~s~~~s~~~ 706 (1024)
||.++|+ ++++++++.+..++++..++|..|++.|++.+.++...+....... ..+
T Consensus 436 AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~~~~~~~~~------------------~~~----- 492 (797)
T PLN03063 436 AIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAELRTRNI------------------PLE----- 492 (797)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhhhhhcccCC------------------CCC-----
Confidence 9999999 5677778788888889999999999999999988765432111100 000
Q ss_pred ccccchhhhHHHHHHHHHHHHhhhcccCCCCCCCCCCcccceeEEEEEecCCCCCCC--------chhhHHHHHHHHHHH
Q 001705 707 DFKLNAELDAVTRQKNLIEAITQKASFNGNASVTHSPGRRQMLIVIAADCYDSDGNT--------TETFQATIKNVMKAA 778 (1024)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rlllIa~DlDGTl~~~--------~~~i~~~~~~~l~~l 778 (1024)
...+.++.++ .++++++++ +|.||||... +..+++.+.++|++|
T Consensus 493 -----------l~~~~~~~~y---------------~~a~~rll~--LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L 544 (797)
T PLN03063 493 -----------LPEQDVIQQY---------------SKSNNRLLI--LGFYGTLTEPRNSQIKEMDLGLHPELKETLKAL 544 (797)
T ss_pred -----------CCHHHHHHHH---------------HhccCeEEE--EecCccccCCCCCccccccCCCCHHHHHHHHHH
Confidence 1122344444 234556665 8999996532 134678999999999
Q ss_pred hhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCCccccCcchhh----hhcccCCchhHHHH
Q 001705 779 GLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYEA----HVEYRWPGENVRSV 854 (1024)
Q Consensus 779 ~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~~~~~d~~~~~----~i~~~w~~~~v~~~ 854 (1024)
.++ ++..|+|+|||+...+..++...++ .++++||+++..++ ..|.. .....|. +.+..+
T Consensus 545 ~~d---~~~~V~IvSGR~~~~L~~~~~~~~l------~l~aeHG~~~r~~~------~~w~~~~~~~~~~~w~-~~v~~~ 608 (797)
T PLN03063 545 CSD---PKTTVVVLSRSGKDILDKNFGEYNI------WLAAENGMFLRHTS------GEWVTTMPEHMNLDWV-DGVKNV 608 (797)
T ss_pred HcC---CCCEEEEEeCCCHHHHHHHhCCCCC------cEEEeCCEEEecCC------CceeeccccccChhHH-HHHHHH
Confidence 988 7899999999999999999987655 59999999987542 23421 1223454 556777
Q ss_pred HhhhhhccCCCCcccccccCCCCceEEEEEecCCCc---hhhHHHHHHHHHhc---CCeEEEEEecCCeEEEEecCCCCH
Q 001705 855 VPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAE---TRKVDNIRQRLRMR---GFRCNLVYTRAGSRLNVVPSFASR 928 (1024)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~---~~~~~el~~~L~~~---~~~~~v~~s~~~~~lEI~p~gasK 928 (1024)
++.+....++ ...+.+.+.+.++++..+. ...+.++.+.|... ...+.++ .+. ..+||.|.++||
T Consensus 609 l~~~~~rtpG-------s~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~-~Gk-~vvEvrp~gvnK 679 (797)
T PLN03063 609 FKYFTDRTPR-------SYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVV-RGQ-KSVEVHAIGVTK 679 (797)
T ss_pred HHHHHHhCCC-------cEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEE-ECC-eEEEEEcCCCCh
Confidence 7777776443 3344566788888865431 24566666666321 2234443 333 499999999999
Q ss_pred HHHHHHHHHHhCC-----CCCCEEEEeCCC-CCCChHHhhcCCCc
Q 001705 929 IQALRYLSIRWGI-----DLSKMVVFVGEK-GDTDYEDLLVGLHK 967 (1024)
Q Consensus 929 g~AL~~L~~~~gi-----~~~~vvafiGDs-~N~D~~~Ml~~ag~ 967 (1024)
|.|++.|+.++.. ..-+++.++||. ++ | |+||+..+-
T Consensus 680 G~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~-D-EdmF~~l~~ 722 (797)
T PLN03063 680 GAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEK-D-EDVYTFFEP 722 (797)
T ss_pred HHHHHHHHHHhhhccccCCCCCEEEEeCCCCCC-c-HHHHHhccc
Confidence 9999999997621 123466667997 56 9 999997753
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-52 Score=492.39 Aligned_cols=437 Identities=51% Similarity=0.879 Sum_probs=342.2
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGS 249 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~ 249 (1024)
+||++||.||+++++++.+++.|+.||++.|+.+|+++|+++|.+|+|+|+|+....+.....|..+.+ +..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~~~~~--------~~~ 72 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYAQPIE--------RIA 72 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccCCCee--------EeC
Confidence 589999999999999999999999999999999999999999943499999987543332223333332 224
Q ss_pred CCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCC
Q 001705 250 CGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVP 329 (1024)
Q Consensus 250 ~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ip 329 (1024)
+|+.++|+|+++. .+.++..+|+++..|...+...+.+ ...+|||||+|++..+.++.++++..++|
T Consensus 73 ~gv~v~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~------------~~~~~DvIH~h~~~~~~~~~~~~~~~~~p 139 (439)
T TIGR02472 73 PGARIVRLPFGPR-RYLRKELLWPYLDELADNLLQHLRQ------------QGHLPDLIHAHYADAGYVGARLSRLLGVP 139 (439)
T ss_pred CCcEEEEecCCCC-CCcChhhhhhhHHHHHHHHHHHHHH------------cCCCCCEEEEcchhHHHHHHHHHHHhCCC
Confidence 6999999998776 4555666777766555444443321 01369999999998889999999889999
Q ss_pred EEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh
Q 001705 330 MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409 (1024)
Q Consensus 330 iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~ 409 (1024)
+|+|.|+++......+...|.....+...|.+..++..|+.+++.+|.|+++|..++..++..+.++.+
T Consensus 140 ~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~----------- 208 (439)
T TIGR02472 140 LIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQP----------- 208 (439)
T ss_pred EEEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHHHHHhccCCCc-----------
Confidence 999999875543333332333222222334455556668889999999999998776654433322222
Q ss_pred cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCC
Q 001705 410 RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPK 489 (1024)
Q Consensus 410 ~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~ 489 (1024)
.++.+||||||.+.|.|.... .........+.++...+++++|+++||+.+.
T Consensus 209 ----------~ki~vIpnGvd~~~f~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~ 260 (439)
T TIGR02472 209 ----------ERMQVIPPGVDLSRFYPPQSS------------------EETSEIDNLLAPFLKDPEKPPILAISRPDRR 260 (439)
T ss_pred ----------cceEEECCCcChhhcCCCCcc------------------ccchhHHHHHHhhccccCCcEEEEEcCCccc
Confidence 389999999999988765410 0011122233444455678899999999999
Q ss_pred CCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcC
Q 001705 490 KNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKT 569 (1024)
Q Consensus 490 Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~ 569 (1024)
||++.+++||..+..+.+.+++.+|+|++++.+.+.....++..++..+++++++.++|.|+|+++.++++++|+.|+..
T Consensus 261 Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~~~~a~~~ 340 (439)
T TIGR02472 261 KNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRLAARS 340 (439)
T ss_pred CCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHHHHHHhhc
Confidence 99999999998764344456776678888877666655556677888899999999999999999999999999988555
Q ss_pred CcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 001705 570 KGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKN 649 (1024)
Q Consensus 570 ~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~ 649 (1024)
+|+||+||..|+||++++||||||+|||+|+.||+.|++.++.+|++|+|.|+++++++|.+++++++.++++++++++.
T Consensus 341 ~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~ 420 (439)
T TIGR02472 341 RGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSDSSQWQLWSRNGIEG 420 (439)
T ss_pred CCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred H-hcCCHHHHHHHHHHHH
Q 001705 650 I-HRFSWPEHCRNYLSHV 666 (1024)
Q Consensus 650 ~-~~fsw~~~a~~~l~~~ 666 (1024)
+ ++|||+.++++|++++
T Consensus 421 ~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 421 VRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred HHHhCCHHHHHHHHHHHh
Confidence 8 7999999999999876
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-53 Score=516.62 Aligned_cols=564 Identities=14% Similarity=0.170 Sum_probs=423.9
Q ss_pred CccccccCCcchHHHH-----------------HHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccC
Q 001705 264 KYIAKESLWPYIHEFV-----------------DGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGAL 326 (1024)
Q Consensus 264 ~~~~k~~lwp~~~~f~-----------------~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~ 326 (1024)
.+++|..|||.+|++. ......++.|++.+.+.+.+| |+||+|++++.+++.++++..
T Consensus 179 ~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~g-----D~VWVHDYHL~LlP~~LR~~~ 253 (934)
T PLN03064 179 NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEG-----DVVWCHDYHLMFLPKCLKEYN 253 (934)
T ss_pred HHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCC-----CEEEEecchhhHHHHHHHHhC
Confidence 4688999999999861 223334467888888888775 999999999999999999875
Q ss_pred -CCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhh---cCCEEEeCCHHHHHHHHhcccCcchHHHH
Q 001705 327 -NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLD---ASEMVVTSTRQEIEMQWGLYDGFDLKLER 402 (1024)
Q Consensus 327 -~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~---~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r 402 (1024)
+.++.|++| .+++.+.+++.+++++.+++ +||+|.++|..++++ |...+.|
T Consensus 254 p~~~IGfFlH------------------iPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rh-------Fl~~c~r 308 (934)
T PLN03064 254 SNMKVGWFLH------------------TPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARH-------FVSACTR 308 (934)
T ss_pred CCCcEEEEec------------------CCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHH-------HHHHHHH
Confidence 689999999 77888899999998887777 999999999999998 7777888
Q ss_pred HHHHhhh-cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhC-CCCCcEE
Q 001705 403 KLRVRRQ-RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFT-NPHKPTI 480 (1024)
Q Consensus 403 ~l~~~~~-~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~I 480 (1024)
+|+.... .|+...|+. .++.++|.|||+..|..... .|.+...+..+.. ..++++|
T Consensus 309 lLg~~~~~~~v~~~Gr~-v~V~~~PiGID~~~f~~~~~---------------------~~~v~~~~~~lr~~~~g~kiI 366 (934)
T PLN03064 309 ILGLEGTPEGVEDQGRL-TRVAAFPIGIDSDRFIRALE---------------------TPQVQQHIKELKERFAGRKVM 366 (934)
T ss_pred HhCccccCCeEEECCEE-EEEEEEeCEEcHHHHHHHhc---------------------ChhHHHHHHHHHHHhCCceEE
Confidence 8876654 345555543 47999999999998865431 1222222221111 1468899
Q ss_pred EEEeCCCCCCCHHHHHHHHhhccccCCCCc----EEEEE------ecCCCcccccccchHHHHHHHHHHHHcCCCCCEEe
Q 001705 481 LALSRPDPKKNVTTLLKAFGECQPLRELAN----MTLIL------GNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAY 550 (1024)
Q Consensus 481 l~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~LIv------G~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~ 550 (1024)
++++|+|+.|||...++||+.+. ..+|. ++||. +++++|+++..+..+.+++|+..+...++.+.+++
T Consensus 367 lgVDRLD~~KGI~~kL~AfE~fL--~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~ 444 (934)
T PLN03064 367 LGVDRLDMIKGIPQKILAFEKFL--EENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHL 444 (934)
T ss_pred EEeeccccccCHHHHHHHHHHHH--HhCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEe
Confidence 99999999999999999999984 44454 33331 55667888888888999999999999999999989
Q ss_pred CCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc-----CCcEEEcCCCCchhhhccCCcEEEeCCCCHHHH
Q 001705 551 PKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAY-----GLPVVATKNGGPVDILKALNNGLLVDPHDQNAI 625 (1024)
Q Consensus 551 ~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~-----G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~l 625 (1024)
...++.+++.++|+.| ||||+||++|||||+++||||| |++|++...|+...+ +..|++|||+|++++
T Consensus 445 ~~~l~~eeL~AlY~~A----DV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L---~~~AllVNP~D~~~v 517 (934)
T PLN03064 445 DRSLDFHALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSL---GAGAILVNPWNITEV 517 (934)
T ss_pred ccCCCHHHHHHHHHhC----CEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHHHh---CCceEEECCCCHHHH
Confidence 9999999999999999 9999999999999999999999 777775555555555 346999999999999
Q ss_pred HHHHHHHHh-CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCCcccccccccccccc
Q 001705 626 ADALLKLLA-DKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNRHPNSHLEIMTIPGEPLSDSLRDVEDFSLRFSM 704 (1024)
Q Consensus 626 a~aI~~ll~-d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~s~~~s~ 704 (1024)
|++|.++|+ ++++++++.+..++.+..+||..|++.|++.+..+...+....... ..
T Consensus 518 A~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~~~~~~~~~~~--------~~-------------- 575 (934)
T PLN03064 518 AASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTVVEAQLRTRQV--------PP-------------- 575 (934)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHhhhhcccccc--------CC--------------
Confidence 999999999 6777888888888889999999999999999987754321111100 00
Q ss_pred ccccccchhhhHHHHHHHHHHHHhhhcccCCCCCCCCCCcccceeEEEEEecCCCCCC----Cc----------hhhHHH
Q 001705 705 EGDFKLNAELDAVTRQKNLIEAITQKASFNGNASVTHSPGRRQMLIVIAADCYDSDGN----TT----------ETFQAT 770 (1024)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rlllIa~DlDGTl~~----~~----------~~i~~~ 770 (1024)
....+.++.++ ..+.+++++ +|.||||.. |+ ..+++.
T Consensus 576 ------------~l~~~~~~~~y---------------~~a~~RLlf--LDyDGTLap~~~~P~~~~~~~~~~~a~p~p~ 626 (934)
T PLN03064 576 ------------QLPPEDAIQRY---------------LQSNNRLLI--LGFNATLTEPVDTPGRRGDQIKEMELRLHPE 626 (934)
T ss_pred ------------CCCHHHHHHHH---------------HhccceEEE--EecCceeccCCCCcccccccccccccCCCHH
Confidence 01123344445 234556666 899999543 22 236688
Q ss_pred HHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCCccccCcchhh----hhcccC
Q 001705 771 IKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYEA----HVEYRW 846 (1024)
Q Consensus 771 ~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~~~~~d~~~~~----~i~~~w 846 (1024)
+.++|++|.++ ++..|+|+|||+...+..+|...++ .++++||+++..+. ..|.. .....|
T Consensus 627 l~~~L~~L~~d---p~n~VaIVSGR~~~~Le~~fg~~~L------~LaAEHG~~~R~~~------~~w~~~~~~~~~~~W 691 (934)
T PLN03064 627 LKEPLRALCSD---PKTTIVVLSGSDRSVLDENFGEFDM------WLAAENGMFLRHTK------GEWMTTMPEHLNMDW 691 (934)
T ss_pred HHHHHHHHHhC---CCCeEEEEeCCCHHHHHHHhCCCCc------eEEeeCCeEEecCC------CcceeccccccchHH
Confidence 99999999988 7899999999999999999988765 59999999987642 23421 122345
Q ss_pred CchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCC---chhhHHHHHHHHHh-c--CCeEEEEEecCCeEEE
Q 001705 847 PGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGA---ETRKVDNIRQRLRM-R--GFRCNLVYTRAGSRLN 920 (1024)
Q Consensus 847 ~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~---~~~~~~el~~~L~~-~--~~~~~v~~s~~~~~lE 920 (1024)
. +.+..++..+....++ ...+.+.+.+.|+++..+ ...++.++.++|.. . ...+.++ .+. ..+|
T Consensus 692 ~-~~v~~ile~~~eRtPG-------S~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~-~Gk-~VVE 761 (934)
T PLN03064 692 V-DSVKHVFEYFTERTPR-------SHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVV-QGS-RSVE 761 (934)
T ss_pred H-HHHHHHHHHHHhcCCC-------cEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEE-eCC-eEEE
Confidence 4 5577777777776544 333455677888876542 23346677777632 1 2334443 333 4999
Q ss_pred EecCCCCHHHHHHHHHHHhC----C-CCCCEEEEeCCCCCCChHHhhcCC
Q 001705 921 VVPSFASRIQALRYLSIRWG----I-DLSKMVVFVGEKGDTDYEDLLVGL 965 (1024)
Q Consensus 921 I~p~gasKg~AL~~L~~~~g----i-~~~~vvafiGDs~N~D~~~Ml~~a 965 (1024)
|.|.++|||.|++.|+.+.. . ..-++|.++||+..|| ++||+..
T Consensus 762 VrP~gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~GDd~~~D-EdmF~~l 810 (934)
T PLN03064 762 VRPVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKD-EDIYTFF 810 (934)
T ss_pred EEcCCCCHHHHHHHHHHhhhhccccCCCCCEEEEeCCCCCCc-HHHHHHH
Confidence 99999999999999999762 1 1235777789987559 9999964
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-52 Score=511.51 Aligned_cols=593 Identities=15% Similarity=0.154 Sum_probs=425.8
Q ss_pred CeEEEEecCCCC-----CCccccccCCcchHHHHHH---------------HHHHHHHHHHHHHhhhcCCCCCcceEEEE
Q 001705 251 GAYIIRIPCGAR-----DKYIAKESLWPYIHEFVDG---------------ALNHIVNMARAIGEQVNGGKPTWPYVIHG 310 (1024)
Q Consensus 251 gv~i~rip~~~~-----~~~~~k~~lwp~~~~f~~~---------------~l~~~~~~~~~l~~~~~~g~~~~pDvIh~ 310 (1024)
....+.+...+. ..+++|..|||.+|++... ....++.|++++.+.+.++ -|+||+
T Consensus 132 ~~~~~pv~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~----~d~VWV 207 (854)
T PLN02205 132 TFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPE----DDFVWI 207 (854)
T ss_pred CceEEEeeCCHHHHHHHHHhhhhccccchhccCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHhCCC----CCEEEE
Confidence 345555544331 2578999999999887421 2223466888888877652 189999
Q ss_pred cCCChHHHHHHHHccC-CCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhh---cCCEEEeCCHHHH
Q 001705 311 HYADAGEVAAHLSGAL-NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLD---ASEMVVTSTRQEI 386 (1024)
Q Consensus 311 h~~~~~~~a~~l~~~~-~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~---~Ad~Vi~~S~~~~ 386 (1024)
|++++.+++.+++++. ..++.|++| .+++...+++.+++++.+++ .||+|.++|.+++
T Consensus 208 hDYhL~llP~~LR~~~~~~~IgfFlH------------------iPFPs~eifr~LP~r~eiL~glL~aDlIGFht~~ya 269 (854)
T PLN02205 208 HDYHLMVLPTFLRKRFNRVKLGFFLH------------------SPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYA 269 (854)
T ss_pred eCchhhHHHHHHHhhCCCCcEEEEec------------------CCCCChHHHhhCCcHHHHHHHHhcCCeEEecCHHHH
Confidence 9999999999999875 689999999 67788889999998887776 9999999999999
Q ss_pred HHHHhcccCcchHHHHHHHHhhhc-----CccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCC
Q 001705 387 EMQWGLYDGFDLKLERKLRVRRQR-----GVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNL 461 (1024)
Q Consensus 387 ~~~~~~~~~f~~~~~r~l~~~~~~-----g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1024)
++ |...+.|+|+..... |+...|+. .++.++|.|||+..|..... .
T Consensus 270 r~-------Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~-v~v~~~PigId~~~~~~~~~---------------------~ 320 (854)
T PLN02205 270 RH-------FLSCCSRMLGLSYESKRGYIGLEYYGRT-VSIKILPVGIHMGQLQSVLS---------------------L 320 (854)
T ss_pred HH-------HHHHHHHHhCCcccCCCcceeEEECCcE-EEEEEEeCeEcHHHHHHHhc---------------------C
Confidence 98 788888888876543 44444544 48999999999988754331 1
Q ss_pred Ccc---hHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCc----EEEE--E----ecCCCcccccccc
Q 001705 462 PPM---WSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELAN----MTLI--L----GNRDDIEDMSNSS 528 (1024)
Q Consensus 462 p~~---~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~LI--v----G~~~~~~~l~~~~ 528 (1024)
|.. .++++..+..+++++|+.++|+|+.|||...++||+++. ..+|. ++|| + +.+++|++++.+.
T Consensus 321 ~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L--~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev 398 (854)
T PLN02205 321 PETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLL--MQHPEWQGKVVLVQIANPARGKGKDVKEVQAET 398 (854)
T ss_pred hhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHH--HhCccccCCEEEEEEecCCCcccHHHHHHHHHH
Confidence 222 223333332346899999999999999999999999994 55563 3443 2 4567888899999
Q ss_pred hHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc----------------
Q 001705 529 SVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAY---------------- 592 (1024)
Q Consensus 529 ~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~---------------- 592 (1024)
.+..++|++...+.++.+.+++...++.+++.++|+.| ||++++|++|||+|+++||.||
T Consensus 399 ~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~A----Dv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~ 474 (854)
T PLN02205 399 HSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVA----ECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPS 474 (854)
T ss_pred HHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhc----cEEEeccccccccccchheeEEccCccccccccccccc
Confidence 99999999999999999988889999999999999999 9999999999999999999997
Q ss_pred ----CCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHH-HHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 001705 593 ----GLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWS-ECRKNGLKNIHRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 593 ----G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~-~~~~~~~~~~~~fsw~~~a~~~l~~~~ 667 (1024)
|+.||+..+|+..++ ..+++|||+|++++|+||.++|++|...+ ...+..++++..++...|++.|+..+.
T Consensus 475 ~~~~gvLiLSEfaGaa~~L----~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~ 550 (854)
T PLN02205 475 TPKKSMLVVSEFIGCSPSL----SGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLE 550 (854)
T ss_pred cCCCCceEeeeccchhHHh----CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 567788888888877 35899999999999999999999765444 444455566689999999999999998
Q ss_pred HhhhcCCCCCccccCCCCCCCCCccccccccccccccccccccchhhhHHHHHHHHHHHHhhhcccCCCCCCCCCCcccc
Q 001705 668 HSRNRHPNSHLEIMTIPGEPLSDSLRDVEDFSLRFSMEGDFKLNAELDAVTRQKNLIEAITQKASFNGNASVTHSPGRRQ 747 (1024)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~s~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (1024)
+....+....... ..+.-..|. +.++.. -.+...+.++.++ .++.+
T Consensus 551 ~~~~~~~~~~~~~-----~g~g~~~~~-------~~~~~~-------~~~l~~~~i~~~y---------------~~~~~ 596 (854)
T PLN02205 551 RTCRDHSRRRCWG-----IGFGLSFRV-------VALDPN-------FRKLSMEHIVSAY---------------KRTTT 596 (854)
T ss_pred HHHHHHhhhhhcc-----ccccccccc-------cccccc-------ccccCHHHHHHHH---------------HhhcC
Confidence 7643321110000 000000000 000000 0012223344544 23444
Q ss_pred eeEEEEEecCCCCCCCc---hhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcC-CCCCCCCEEEecCCc
Q 001705 748 MLIVIAADCYDSDGNTT---ETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCT-VNIEDFDAIVCNSGS 823 (1024)
Q Consensus 748 rlllIa~DlDGTl~~~~---~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~-i~~~~~d~lI~~nGa 823 (1024)
++++ +|+||||.... ..+++++.++|++|.++ +|+.|+|+|||++.++.++|.... + ++||+||+
T Consensus 597 rlI~--LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d---~g~~VaIvSGR~~~~L~~~f~~~~~l------~laaEHG~ 665 (854)
T PLN02205 597 RAIL--LDYDGTLMPQASIDKSPSSKSIDILNTLCRD---KNNMVFIVSARSRKTLADWFSPCEKL------GIAAEHGY 665 (854)
T ss_pred eEEE--EecCCcccCCccccCCCCHHHHHHHHHHHhc---CCCEEEEEeCCCHHHHHHHhCCCCCe------EEEEeCCE
Confidence 5444 99999977542 36778999999999766 699999999999999999998742 3 69999999
Q ss_pred eEEcCCCccccCcchhh---hhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCc---hhhHHHH
Q 001705 824 ELYFPWRDMVADGDYEA---HVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAE---TRKVDNI 897 (1024)
Q Consensus 824 ~I~~~~~~~~~d~~~~~---~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~---~~~~~el 897 (1024)
++..+. ...|.. .....|. +.++.++..+....++ ...+.+...+.+++++.+. ....+++
T Consensus 666 ~ir~~~-----~~~w~~~~~~~~~~w~-~~v~~i~~~y~ertpG-------s~IE~K~~slv~HyR~adpd~~~~qa~el 732 (854)
T PLN02205 666 FLRLKR-----DVEWETCVPVADCSWK-QIAEPVMQLYTETTDG-------STIEDKETALVWCYEDADPDFGSCQAKEL 732 (854)
T ss_pred EEEeCC-----CceeeecchhhhHHHH-HHHHHHHHHHhcCCCc-------hhheecceEEEEehhhCChHHhhhhhHHH
Confidence 998752 122321 1122343 3345555555444322 2333446778888764421 1123455
Q ss_pred HHHHHhcCC-eEEEEEecCCeEEEEecCCCCHHHHHHHHHH---HhCCCCCCEEEEeCCCCCCChHHhhcCCC
Q 001705 898 RQRLRMRGF-RCNLVYTRAGSRLNVVPSFASRIQALRYLSI---RWGIDLSKMVVFVGEKGDTDYEDLLVGLH 966 (1024)
Q Consensus 898 ~~~L~~~~~-~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~---~~gi~~~~vvafiGDs~N~D~~~Ml~~ag 966 (1024)
...+..... ....+.++.. ++||.|.++|||.|++.|++ .+|++++.+++| ||+.| | ++||+.++
T Consensus 733 ~~~l~~~l~~~~~~v~~G~~-vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~-GDD~n-D-edMF~~~~ 801 (854)
T PLN02205 733 LDHLESVLANEPVTVKSGQN-IVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCI-GDDRS-D-EDMFEVIT 801 (854)
T ss_pred HHHHHHHHhcCceEEEECCc-EEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEE-cCCcc-H-HHHHHHhh
Confidence 555543211 1223445554 99999999999999999985 469999999997 99999 9 99999775
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=399.67 Aligned_cols=457 Identities=18% Similarity=0.189 Sum_probs=303.4
Q ss_pred cccccccCCCceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCC-c
Q 001705 159 IWSEDDKSSRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEP-N 237 (1024)
Q Consensus 159 ~~~~~~~~~~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~-~ 237 (1024)
.|.... +.++|||+||+.+.. | -..+||.+-+|..|+++|++.| |+|.|+++.+..-......+.. .
T Consensus 472 ~~~~~~-~~~~mkILfVasE~a--------P-~aKtGGLaDVv~sLPkAL~~~G--hdV~VIlP~Y~~i~~~~~~~~~~~ 539 (977)
T PLN02939 472 KLTLSG-TSSGLHIVHIAAEMA--------P-VAKVGGLADVVSGLGKALQKKG--HLVEIVLPKYDCMQYDQIRNLKVL 539 (977)
T ss_pred HhccCC-CCCCCEEEEEEcccc--------c-ccccccHHHHHHHHHHHHHHcC--CeEEEEeCCCcccChhhhhccccc
Confidence 455555 567899999999843 3 2579999999999999999999 9999999976422100000000 0
Q ss_pred cc-----cCCCC--C---CCCCCCeEEEEecC-CCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcce
Q 001705 238 EM-----LSCPS--D---GTGSCGAYIIRIPC-GARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPY 306 (1024)
Q Consensus 238 e~-----l~~~~--~---~~~~~gv~i~rip~-~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pD 306 (1024)
+. +.... . ....+|+.++.|.. .|. .|+....+..+-+.+..++ -|+++..+.+... ..+||
T Consensus 540 ~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~~-~fF~R~~iYg~~Dn~~RF~-----~FsrAaLe~~~~~-~~~PD 612 (977)
T PLN02939 540 DVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPS-KFFWRAQYYGEHDDFKRFS-----YFSRAALELLYQS-GKKPD 612 (977)
T ss_pred ceEEEEeecCceeEEEEEEEEECCeeEEEEecCCch-hccCCCCCCCCccHHHHHH-----HHHHHHHHHHHhc-CCCCC
Confidence 00 00000 0 02235777777753 121 2444444443323332221 1233333333221 25899
Q ss_pred EEEEcCCChHHHHHHHHc------cCCCCEEEEeCCCchhh---hHHHHhcCCCCcchh-h-HH--HHHHHHHHHHHhhh
Q 001705 307 VIHGHYADAGEVAAHLSG------ALNVPMVLTGHSLGRNK---FEQLLKQGRLPKDIN-A-SY--KIMRRIEAEELGLD 373 (1024)
Q Consensus 307 vIh~h~~~~~~~a~~l~~------~~~ipiV~t~H~l~~~~---~~~l~~~g~~~~~i~-~-~y--~~~r~i~~e~~~l~ 373 (1024)
|||+|+|++++++.++.. ..++|+|||+|++.... ...+...|.....+. + .+ ++..++..-+..+-
T Consensus 613 IIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN~LK~GIv 692 (977)
T PLN02939 613 IIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVKGAIV 692 (977)
T ss_pred EEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhccCCchHHHHHHHH
Confidence 999999999987544432 23689999999984211 011111121111000 0 00 00112222233455
Q ss_pred cCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCc
Q 001705 374 ASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGND 453 (1024)
Q Consensus 374 ~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~ 453 (1024)
.||.|+|+|+.+.+++.. . +...++.. ++.+..++.+||||||++.|.|.. +..+...++++
T Consensus 693 ~AD~VtTVSptYA~EI~t-e--~G~GL~~~-----------L~~~~~Kl~gIlNGID~e~wnPat----D~~L~~~Ys~~ 754 (977)
T PLN02939 693 YSNIVTTVSPTYAQEVRS-E--GGRGLQDT-----------LKFHSKKFVGILNGIDTDTWNPST----DRFLKVQYNAN 754 (977)
T ss_pred hCCeeEeeeHHHHHHHHH-H--hccchHHH-----------hccccCCceEEecceehhhcCCcc----ccccccccChh
Confidence 799999999999998765 2 11122222 233445899999999999998865 22222222211
Q ss_pred cccccCCCCcchHHHhhhhCC---CCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEE-EEEecCCCcccccccch
Q 001705 454 RTQSKRNLPPMWSEVMRFFTN---PHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMT-LILGNRDDIEDMSNSSS 529 (1024)
Q Consensus 454 ~~~~~~~~p~~~~~~~~~~~~---~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~-LIvG~~~~~~~l~~~~~ 529 (1024)
.+..+... ......++..+ ++.|+|+++||+.+.||++.+++|+..+.. . ++. +|+|+|++ .
T Consensus 755 dl~GK~~n--K~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~--dvqLVIvGdGp~--------~ 820 (977)
T PLN02939 755 DLQGKAAN--KAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--L--GGQFVLLGSSPV--------P 820 (977)
T ss_pred hhhhhhhh--hHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--c--CCEEEEEeCCCc--------H
Confidence 11111111 12234455544 357999999999999999999999988742 2 334 47788864 1
Q ss_pred HHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhc
Q 001705 530 VVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILK 609 (1024)
Q Consensus 530 ~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~ 609 (1024)
.+...+..++.+++..++|.|+|.++......+|+.| |+||+||.+||||++++|||+||+|+|++++||..|+|.
T Consensus 821 ~~e~eL~~La~~l~l~drV~FlG~~de~lah~IYAaA----DIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~ 896 (977)
T PLN02939 821 HIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAAS----DMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVF 896 (977)
T ss_pred HHHHHHHHHHHHcCCCCeEEEEeccCHHHHHHHHHhC----CEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceee
Confidence 3456778889999998999999998766678999999 999999999999999999999999999999999999986
Q ss_pred c---------CCcEEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhc
Q 001705 610 A---------LNNGLLVDPHDQNAIADALLKLLA----DKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNR 672 (1024)
Q Consensus 610 ~---------~~~Gllv~p~d~~~la~aI~~ll~----d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~ 672 (1024)
+ +.+|++|+|.|+++++++|.+++. +++.|++++++++. +.|||+..+++|.++|.+++.+
T Consensus 897 d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am~--~dFSWe~~A~qYeeLY~~ll~~ 970 (977)
T PLN02939 897 DFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMN--IDFSWDSSASQYEELYQRAVAR 970 (977)
T ss_pred cCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH--hcCCHHHHHHHHHHHHHHHHHh
Confidence 5 478999999999999999999875 79999999887653 6899999999999999998754
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=379.80 Aligned_cols=402 Identities=25% Similarity=0.343 Sum_probs=290.9
Q ss_pred EEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCC
Q 001705 172 IVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCG 251 (1024)
Q Consensus 172 Il~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~g 251 (1024)
|++|+.|.. |...|-..+.||.+.++.+|+++|+++| |+|+|+|+....+. .+.. +..+|
T Consensus 1 ~~~~~~~~~----~~~~~~~~~~GG~e~~v~~la~~L~~~G--~~V~v~~~~~~~~~------~~~~--------~~~~~ 60 (405)
T TIGR03449 1 VAMISMHTS----PLQQPGTGDAGGMNVYILETATELARRG--IEVDIFTRATRPSQ------PPVV--------EVAPG 60 (405)
T ss_pred CeEEeccCC----ccccCCCcCCCCceehHHHHHHHHhhCC--CEEEEEecccCCCC------CCcc--------ccCCC
Confidence 578888854 3322322246999999999999999999 99999998642111 0111 22359
Q ss_pred eEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCEE
Q 001705 252 AYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMV 331 (1024)
Q Consensus 252 v~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipiV 331 (1024)
+++++++.++. ...... .+..........+.+ ..+.. ...+||+||+|++..+.++.++++.+++|+|
T Consensus 61 ~~v~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~---~~~~~-~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v 128 (405)
T TIGR03449 61 VRVRNVVAGPY-EGLDKE-------DLPTQLCAFTGGVLR---AEARH-EPGYYDLIHSHYWLSGQVGWLLRDRWGVPLV 128 (405)
T ss_pred cEEEEecCCCc-ccCCHH-------HHHHHHHHHHHHHHH---HHhhc-cCCCCCeEEechHHHHHHHHHHHHhcCCCEE
Confidence 99999986554 111111 111111111111111 11111 1147999999998888888888888899999
Q ss_pred EEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcC
Q 001705 332 LTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRG 411 (1024)
Q Consensus 332 ~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g 411 (1024)
+|.|+++..+...+.... ... ....+ ..|..+++.+|.|+++|+...+.+...+.
T Consensus 129 ~t~h~~~~~~~~~~~~~~----~~~--~~~~~--~~e~~~~~~~d~vi~~s~~~~~~~~~~~~----------------- 183 (405)
T TIGR03449 129 HTAHTLAAVKNAALADGD----TPE--PEARR--IGEQQLVDNADRLIANTDEEARDLVRHYD----------------- 183 (405)
T ss_pred EeccchHHHHHHhccCCC----CCc--hHHHH--HHHHHHHHhcCeEEECCHHHHHHHHHHcC-----------------
Confidence 999987432211110000 000 01111 12566789999999999987776544332
Q ss_pred ccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCC
Q 001705 412 VSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKN 491 (1024)
Q Consensus 412 ~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kg 491 (1024)
....++.+||||+|.+.|.+... .....++...+++++|+++||+.+.||
T Consensus 184 -----~~~~ki~vi~ngvd~~~~~~~~~-------------------------~~~~~~~~~~~~~~~i~~~G~l~~~K~ 233 (405)
T TIGR03449 184 -----ADPDRIDVVAPGADLERFRPGDR-------------------------ATERARLGLPLDTKVVAFVGRIQPLKA 233 (405)
T ss_pred -----CChhhEEEECCCcCHHHcCCCcH-------------------------HHHHHhcCCCCCCcEEEEecCCCcccC
Confidence 11238999999999987754321 011223334467889999999999999
Q ss_pred HHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCC
Q 001705 492 VTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTK 570 (1024)
Q Consensus 492 i~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~ 570 (1024)
++.+++|+..+.+..+..++.+ ++|+..... .....++.++++.+++.++|.|+|+++.+++.++|+.|
T Consensus 234 ~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g------~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~a---- 303 (405)
T TIGR03449 234 PDVLLRAVAELLDRDPDRNLRVIVVGGPSGSG------LATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAA---- 303 (405)
T ss_pred HHHHHHHHHHHHhhCCCcceEEEEEeCCCCCc------chHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhC----
Confidence 9999999999853222223665 667532100 02346788889999999999999999999999999999
Q ss_pred cEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Q 001705 571 GVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNI 650 (1024)
Q Consensus 571 dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~ 650 (1024)
|++++||..|+||++++||||||+|||+++.||..|++.++.+|++++|+|+++++++|.+++++++.+++++.++++.+
T Consensus 304 d~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~ 383 (405)
T TIGR03449 304 DVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDDPRTRIRMGAAAVEHA 383 (405)
T ss_pred CEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hcCCHHHHHHHHHHHHHHhh
Q 001705 651 HRFSWPEHCRNYLSHVEHSR 670 (1024)
Q Consensus 651 ~~fsw~~~a~~~l~~~~~~~ 670 (1024)
++|||+.++++|+++|.+++
T Consensus 384 ~~fsw~~~~~~~~~~y~~~~ 403 (405)
T TIGR03449 384 AGFSWAATADGLLSSYRDAL 403 (405)
T ss_pred HhCCHHHHHHHHHHHHHHHh
Confidence 89999999999999999875
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-40 Score=390.13 Aligned_cols=439 Identities=20% Similarity=0.219 Sum_probs=287.5
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCC-CC---
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCP-SD--- 245 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~-~~--- 245 (1024)
|||+|||++.. | ...+||++.+|..|+++|+++| |+|+|+|+....-. ...... ..+... ..
T Consensus 1 m~i~~vs~e~~--------P-~~k~GGl~~~v~~L~~~L~~~G--~~V~v~~p~y~~~~--~~~~~~-~~~~~~~~~~~~ 66 (466)
T PRK00654 1 MKILFVASECA--------P-LIKTGGLGDVVGALPKALAALG--HDVRVLLPGYPAIR--EKLRDA-QVVGRLDLFTVL 66 (466)
T ss_pred CeEEEEEcccc--------c-CcccCcHHHHHHHHHHHHHHCC--CcEEEEecCCcchh--hhhcCc-eEEEEeeeEEEE
Confidence 89999999954 3 2459999999999999999999 99999998753210 000000 000000 00
Q ss_pred --CCCCCCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHH
Q 001705 246 --GTGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLS 323 (1024)
Q Consensus 246 --~~~~~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~ 323 (1024)
....+|+++++++.. .++.+..+..+...+...+ .+.......+.. ...+|||||+|+|+++.++.+++
T Consensus 67 ~~~~~~~gv~v~~v~~~---~~~~~~~~y~~~d~~~r~~-~f~~~~~~~~~~-----~~~~pDiiH~h~w~~~~~~~~l~ 137 (466)
T PRK00654 67 FGHLEGDGVPVYLIDAP---HLFDRPSGYGYPDNGERFA-FFSWAAAEFAEG-----LDPRPDIVHAHDWHTGLIPALLK 137 (466)
T ss_pred EEeEEcCCceEEEEeCH---HHcCCCCCCCCcChHHHHH-HHHHHHHHHHHh-----cCCCCceEEECCcHHHHHHHHHH
Confidence 012368999988752 3444444544443322211 111111222211 12479999999999999999988
Q ss_pred ccC-----CCCEEEEeCCCchhh---hHHHHhcCCCCcch-hhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhccc
Q 001705 324 GAL-----NVPMVLTGHSLGRNK---FEQLLKQGRLPKDI-NASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYD 394 (1024)
Q Consensus 324 ~~~-----~ipiV~t~H~l~~~~---~~~l~~~g~~~~~i-~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~ 394 (1024)
+.+ ++|+|+|+|++.... .+.+...|...... ...+.....+...+..+..||.|+++|+.+.+++...+.
T Consensus 138 ~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~~~ 217 (466)
T PRK00654 138 EKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITTPEF 217 (466)
T ss_pred HhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhccccC
Confidence 653 799999999974311 11111111100000 000001111223455789999999999988887644221
Q ss_pred CcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCC
Q 001705 395 GFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTN 474 (1024)
Q Consensus 395 ~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 474 (1024)
++ .+...+ +.+..++.+||||||.+.|.|... ..+...+......... ........++...
T Consensus 218 ~~--gl~~~~-----------~~~~~ki~vI~NGid~~~~~p~~~----~~~~~~~~~~~~~~k~--~~k~~l~~~~gl~ 278 (466)
T PRK00654 218 GY--GLEGLL-----------RARSGKLSGILNGIDYDIWNPETD----PLLAANYSADDLEGKA--ENKRALQERFGLP 278 (466)
T ss_pred Cc--ChHHHH-----------HhcccCceEecCCCCccccCCccC----cccccccChhhhhchH--HHHHHHHHHhCCC
Confidence 11 111111 112348999999999999987541 1111111100000000 0011223344443
Q ss_pred -CCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEe-CC
Q 001705 475 -PHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAY-PK 552 (1024)
Q Consensus 475 -~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~-~g 552 (1024)
++.++|+++||+.+.||++.+++|+.++.+ +..++ +|+|+++. .+..++.+++.+++. ++.+ .|
T Consensus 279 ~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~--~~~~l-vivG~g~~---------~~~~~l~~l~~~~~~--~v~~~~g 344 (466)
T PRK00654 279 DDDAPLFAMVSRLTEQKGLDLVLEALPELLE--QGGQL-VLLGTGDP---------ELEEAFRALAARYPG--KVGVQIG 344 (466)
T ss_pred CCCCcEEEEeeccccccChHHHHHHHHHHHh--cCCEE-EEEecCcH---------HHHHHHHHHHHHCCC--cEEEEEe
Confidence 367899999999999999999999999853 22333 36677642 245677778887763 4554 56
Q ss_pred CCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccC------CcEEEeCCCCHHHHH
Q 001705 553 HHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKAL------NNGLLVDPHDQNAIA 626 (1024)
Q Consensus 553 ~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~------~~Gllv~p~d~~~la 626 (1024)
+ +.+.+..+|+.| |++|+||.+||||++++|||+||+|+|+++.||+.|+|.++ .+|++|+|.|+++++
T Consensus 345 ~-~~~~~~~~~~~a----Dv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la 419 (466)
T PRK00654 345 Y-DEALAHRIYAGA----DMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLL 419 (466)
T ss_pred C-CHHHHHHHHhhC----CEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHH
Confidence 5 445567899999 99999999999999999999999999999999999999887 899999999999999
Q ss_pred HHHHHHHh---CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 001705 627 DALLKLLA---DKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRN 671 (1024)
Q Consensus 627 ~aI~~ll~---d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~ 671 (1024)
++|.++++ +++.++++++++++ +.|||+..+++|+++|++++.
T Consensus 420 ~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 420 RALRRALELYRQPPLWRALQRQAMA--QDFSWDKSAEEYLELYRRLLG 465 (466)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHHHHhh
Confidence 99999887 77778888887754 689999999999999998764
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-38 Score=388.23 Aligned_cols=422 Identities=16% Similarity=0.124 Sum_probs=284.2
Q ss_pred CCCceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCc-cccCCCC
Q 001705 166 SSRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPN-EMLSCPS 244 (1024)
Q Consensus 166 ~~~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~-e~l~~~~ 244 (1024)
+..+|+|+|||.+.. | -..+||+..+|..|+++|++.| |+|+|+++............... ..+....
T Consensus 584 ~~~pM~Il~VSsE~~--------P-~aKvGGLgDVV~sLp~ALa~~G--h~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~ 652 (1036)
T PLN02316 584 KEPPMHIVHIAVEMA--------P-IAKVGGLGDVVTSLSRAVQDLN--HNVDIILPKYDCLNLSHVKDLHYQRSYSWGG 652 (1036)
T ss_pred CCCCcEEEEEEcccC--------C-CCCcCcHHHHHHHHHHHHHHcC--CEEEEEecCCcccchhhcccceEEEEeccCC
Confidence 455699999999953 2 1469999999999999999999 99999999864311000000000 0000000
Q ss_pred -----CCCCCCCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHH
Q 001705 245 -----DGTGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVA 319 (1024)
Q Consensus 245 -----~~~~~~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a 319 (1024)
.....+|+.++.+.... .++....+..+.+.+.. +. .|+++..+.+.. ...+|||||+|+|+.++++
T Consensus 653 ~~~~v~~~~~~GV~vyfl~~~~--~~F~r~~~Yg~~Dd~~R-F~----~F~~Aale~l~~-~~~~PDIIHaHDW~talva 724 (1036)
T PLN02316 653 TEIKVWFGKVEGLSVYFLEPQN--GMFWAGCVYGCRNDGER-FG----FFCHAALEFLLQ-SGFHPDIIHCHDWSSAPVA 724 (1036)
T ss_pred EEEEEEEEEECCcEEEEEeccc--cccCCCCCCCchhHHHH-HH----HHHHHHHHHHHh-cCCCCCEEEECCChHHHHH
Confidence 00223577887776421 12222223322222211 11 122222222221 1257999999999999999
Q ss_pred HHHHcc------CCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcc
Q 001705 320 AHLSGA------LNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLY 393 (1024)
Q Consensus 320 ~~l~~~------~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~ 393 (1024)
.+++.. .++|+|+|+|++.... .. .+..+..||.|+++|+.+.+++...+
T Consensus 725 ~llk~~~~~~~~~~~p~V~TiHnl~~~~------------------n~------lk~~l~~AD~ViTVS~tya~EI~~~~ 780 (1036)
T PLN02316 725 WLFKDHYAHYGLSKARVVFTIHNLEFGA------------------NH------IGKAMAYADKATTVSPTYSREVSGNS 780 (1036)
T ss_pred HHHHHhhhhhccCCCCEEEEeCCcccch------------------hH------HHHHHHHCCEEEeCCHHHHHHHHhcc
Confidence 988764 3589999999863210 01 12357899999999999888765421
Q ss_pred cCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhC
Q 001705 394 DGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFT 473 (1024)
Q Consensus 394 ~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 473 (1024)
. +. .+..++.+||||||++.|.|... ..+...+.++.....+ .........++..
T Consensus 781 ~-l~-------------------~~~~Kl~vI~NGID~~~w~P~tD----~~lp~~y~~~~~~~gK-~~~k~~Lr~~lGL 835 (1036)
T PLN02316 781 A-IA-------------------PHLYKFHGILNGIDPDIWDPYND----NFIPVPYTSENVVEGK-RAAKEALQQRLGL 835 (1036)
T ss_pred C-cc-------------------cccCCEEEEECCccccccCCccc----ccccccCCchhhhhhh-hhhHHHHHHHhCC
Confidence 1 00 11238999999999999887641 1111000000000000 0001122344554
Q ss_pred C-CCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCC--CCCEEe
Q 001705 474 N-PHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDL--YGQVAY 550 (1024)
Q Consensus 474 ~-~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l--~~~V~~ 550 (1024)
+ ++.|+|+++|||.+.||++.|++|+..+. .....+ +|+|+|++ ..+...+..++.++++ .++|.|
T Consensus 836 ~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll--~~~~ql-VIvG~Gpd--------~~~e~~l~~La~~Lg~~~~~rV~f 904 (1036)
T PLN02316 836 KQADLPLVGIITRLTHQKGIHLIKHAIWRTL--ERNGQV-VLLGSAPD--------PRIQNDFVNLANQLHSSHHDRARL 904 (1036)
T ss_pred CcccCeEEEEEeccccccCHHHHHHHHHHHh--hcCcEE-EEEeCCCC--------HHHHHHHHHHHHHhCccCCCeEEE
Confidence 4 36899999999999999999999999884 333333 46788864 2345677888888865 578988
Q ss_pred CCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccC-------------CcEEEe
Q 001705 551 PKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKAL-------------NNGLLV 617 (1024)
Q Consensus 551 ~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~-------------~~Gllv 617 (1024)
.+..+......+|+.| |+||+||++||||++.+|||+||+|+|++++||++|+|.++ .+|++|
T Consensus 905 ~g~~de~lah~iyaaA----DiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf 980 (1036)
T PLN02316 905 CLTYDEPLSHLIYAGA----DFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSF 980 (1036)
T ss_pred EecCCHHHHHHHHHhC----cEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEe
Confidence 8775333234799999 99999999999999999999999999999999999999874 589999
Q ss_pred CCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHhh
Q 001705 618 DPHDQNAIADALLKLLAD-KNMWSECRKNGLKNI-HRFSWPEHCRNYLSHVEHSR 670 (1024)
Q Consensus 618 ~p~d~~~la~aI~~ll~d-~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~~ 670 (1024)
+|.|+++|+.+|.+++.+ ++....++..+++.+ +.|||+..+++|+++|++++
T Consensus 981 ~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 981 DGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred CCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 999999999999999986 455566677777777 68999999999999998764
|
|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-38 Score=367.41 Aligned_cols=398 Identities=15% Similarity=0.122 Sum_probs=285.6
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCC--cccCCCccccCCCCCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVD--SSYGEPNEMLSCPSDGT 247 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~--~~y~~~~e~l~~~~~~~ 247 (1024)
|||++|+.+++ |+.||.+.++.+|+++|.++| |+|+|+|+....|... ..|..... ..+
T Consensus 1 mkIlii~~~~~-----------P~~~g~~~~~~~l~~~L~~~G--~~V~vit~~~~~~~~~~~~~~~~~~~------~~~ 61 (412)
T PRK10307 1 MKILVYGINYA-----------PELTGIGKYTGEMAEWLAARG--HEVRVITAPPYYPQWRVGEGYSAWRY------RRE 61 (412)
T ss_pred CeEEEEecCCC-----------CCccchhhhHHHHHHHHHHCC--CeEEEEecCCCCCCCCCCcccccccc------eee
Confidence 89999997743 678999999999999999999 9999999874333321 11111000 002
Q ss_pred CCCCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC--hHHHHHHHHcc
Q 001705 248 GSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYAD--AGEVAAHLSGA 325 (1024)
Q Consensus 248 ~~~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~--~~~~a~~l~~~ 325 (1024)
..+|++++|+|...... ...+..+.....+.+..... +...+. .+||+||+|.+. ....+.++++.
T Consensus 62 ~~~~i~v~r~~~~~~~~----~~~~~~~~~~~~~~~~~~~~----~~~~~~----~~~Div~~~~p~~~~~~~~~~~~~~ 129 (412)
T PRK10307 62 SEGGVTVWRCPLYVPKQ----PSGLKRLLHLGSFALSSFFP----LLAQRR----WRPDRVIGVVPTLFCAPGARLLARL 129 (412)
T ss_pred ecCCeEEEEccccCCCC----ccHHHHHHHHHHHHHHHHHH----HhhccC----CCCCEEEEeCCcHHHHHHHHHHHHh
Confidence 34699999998532100 00001010111111111111 111111 369999999763 34556677888
Q ss_pred CCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHH
Q 001705 326 LNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLR 405 (1024)
Q Consensus 326 ~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~ 405 (1024)
.++|+|+++|+.+++... ..|..... ...++... .|+.+++.||.|++.|+...+.+...
T Consensus 130 ~~~~~v~~~~d~~~~~~~---~~~~~~~~--~~~~~~~~--~~~~~~~~ad~ii~~S~~~~~~~~~~------------- 189 (412)
T PRK10307 130 SGARTWLHIQDYEVDAAF---GLGLLKGG--KVARLATA--FERSLLRRFDNVSTISRSMMNKAREK------------- 189 (412)
T ss_pred hCCCEEEEeccCCHHHHH---HhCCccCc--HHHHHHHH--HHHHHHhhCCEEEecCHHHHHHHHHc-------------
Confidence 899999999987654322 22222111 11122222 37778999999999999877764332
Q ss_pred HhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeC
Q 001705 406 VRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSR 485 (1024)
Q Consensus 406 ~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgR 485 (1024)
|....++.+||||+|.+.|.+... +........+...+++++|+|+||
T Consensus 190 ----------~~~~~~i~vi~ngvd~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~i~~~G~ 237 (412)
T PRK10307 190 ----------GVAAEKVIFFPNWSEVARFQPVAD----------------------ADVDALRAQLGLPDGKKIVLYSGN 237 (412)
T ss_pred ----------CCCcccEEEECCCcCHhhcCCCCc----------------------cchHHHHHHcCCCCCCEEEEEcCc
Confidence 111238999999999988765431 000112223334566789999999
Q ss_pred CCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHH
Q 001705 486 PDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYR 564 (1024)
Q Consensus 486 ld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~ 564 (1024)
+.+.||++.+++|+..+. ..+++.| |+|+++. .+++.+++.++++. +|.|+|+++.++++++|+
T Consensus 238 l~~~kg~~~li~a~~~l~---~~~~~~l~ivG~g~~-----------~~~l~~~~~~~~l~-~v~f~G~~~~~~~~~~~~ 302 (412)
T PRK10307 238 IGEKQGLELVIDAARRLR---DRPDLIFVICGQGGG-----------KARLEKMAQCRGLP-NVHFLPLQPYDRLPALLK 302 (412)
T ss_pred cccccCHHHHHHHHHHhc---cCCCeEEEEECCChh-----------HHHHHHHHHHcCCC-ceEEeCCCCHHHHHHHHH
Confidence 999999999999999873 3456665 7888764 35567788888886 799999999999999999
Q ss_pred HhhcCCcEEEecCCCCC----CCHHHHHHHHcCCcEEEcCCCC--chhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHH
Q 001705 565 LAAKTKGVFINPALVEP----FGLTIIEAAAYGLPVVATKNGG--PVDILKALNNGLLVDPHDQNAIADALLKLLADKNM 638 (1024)
Q Consensus 565 ~A~~~~dv~v~ps~~Eg----fgl~llEAmA~G~PVVat~~Gg--~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~ 638 (1024)
.| |++|+|+..|+ +|.+++||||||+|||+|+.|| ..+++. .+|++++|+|+++++++|.++++|+++
T Consensus 303 ~a----Di~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~~~~~~ 376 (412)
T PRK10307 303 MA----DCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALARQALL 376 (412)
T ss_pred hc----CEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHHhCHHH
Confidence 99 99999999998 5777899999999999999876 457876 689999999999999999999999999
Q ss_pred HHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHhhh
Q 001705 639 WSECRKNGLKNI-HRFSWPEHCRNYLSHVEHSRN 671 (1024)
Q Consensus 639 ~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~~~ 671 (1024)
++++++++++.+ ++|||+.++++|++.|.+++.
T Consensus 377 ~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~ 410 (412)
T PRK10307 377 RPKLGTVAREYAERTLDKENVLRQFIADIRGLVA 410 (412)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc
Confidence 999999999999 599999999999999998765
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=378.19 Aligned_cols=440 Identities=21% Similarity=0.232 Sum_probs=290.1
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcc-cCCC---ccc-cC---
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSS-YGEP---NEM-LS--- 241 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~-y~~~---~e~-l~--- 241 (1024)
|||+|||++.. | ...+||++.+|..|+++|+++| |+|.|+++....-..... ..+. ..+ +.
T Consensus 1 m~i~~vs~E~~--------P-~~k~GGl~~~v~~L~~aL~~~G--~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (473)
T TIGR02095 1 MRVLFVAAEMA--------P-FAKTGGLADVVGALPKALAALG--HDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRT 69 (473)
T ss_pred CeEEEEEeccc--------c-ccCcCcHHHHHHHHHHHHHHcC--CeEEEEecCCcChhhhhccCeEEEEEEEEeecCce
Confidence 89999999943 2 2469999999999999999999 999999987643111000 0000 000 00
Q ss_pred --CCCCCCCCCCeEEEEecCCCCCCcccc-ccCCc--chHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChH
Q 001705 242 --CPSDGTGSCGAYIIRIPCGARDKYIAK-ESLWP--YIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAG 316 (1024)
Q Consensus 242 --~~~~~~~~~gv~i~rip~~~~~~~~~k-~~lwp--~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~ 316 (1024)
........+|++++++.... ++.. ..+.. +...+.. ... |.++..+.+.. ...+|||||+|+|+++
T Consensus 70 ~~~~~~~~~~~~v~~~~i~~~~---~~~r~~~~y~~~~~d~~~r-~~~----f~~a~~~~~~~-~~~~~DiiH~hdw~~~ 140 (473)
T TIGR02095 70 LYVKVFEGVVEGVPVYFIDNPS---LFDRPGGIYGDDYPDNAER-FAF----FSRAAAELLSG-LGWQPDVVHAHDWHTA 140 (473)
T ss_pred eEEEEEEEEECCceEEEEECHH---HcCCCCCCCCCCCCCHHHH-HHH----HHHHHHHHHHh-cCCCCCEEEECCcHHH
Confidence 00000234688888887532 1111 11221 1122111 111 12222222211 1257999999999999
Q ss_pred HHHHHHHccCC---CCEEEEeCCCchhh---hHHHHhcCCCCcch-hhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHH
Q 001705 317 EVAAHLSGALN---VPMVLTGHSLGRNK---FEQLLKQGRLPKDI-NASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQ 389 (1024)
Q Consensus 317 ~~a~~l~~~~~---ipiV~t~H~l~~~~---~~~l~~~g~~~~~i-~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~ 389 (1024)
.++.+++...+ +|+|+|+|++.... ...+...|...... ...++...++.+.+.++..||.|+++|+.+.+++
T Consensus 141 ~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei 220 (473)
T TIGR02095 141 LVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAREI 220 (473)
T ss_pred HHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHHHHh
Confidence 99999987776 99999999974311 11111111110000 0001111134445678899999999999988886
Q ss_pred HhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHh
Q 001705 390 WGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVM 469 (1024)
Q Consensus 390 ~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 469 (1024)
.... +...++..+.. +..++.+||||||.+.|.|... ..+...+........ .........
T Consensus 221 ~~~~--~~~~l~~~l~~-----------~~~ki~~I~NGid~~~~~p~~~----~~~~~~~~~~~~~~k--~~~k~~l~~ 281 (473)
T TIGR02095 221 LTPE--FGYGLDGVLKA-----------RSGKLRGILNGIDTEVWNPATD----PYLKANYSADDLAGK--AENKEALQE 281 (473)
T ss_pred cCCc--CCccchhHHHh-----------cCCCeEEEeCCCCccccCCCCC----cccccCcCccchhhh--hhhHHHHHH
Confidence 4421 11111222211 2238999999999999987542 111111110000000 000112233
Q ss_pred hhhCCC--CCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCC
Q 001705 470 RFFTNP--HKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYG 546 (1024)
Q Consensus 470 ~~~~~~--~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~ 546 (1024)
++..+. +.++|+++||+.+.||++.+++|+.++.+ .. +.| |+|+++ +++..++.+++.+++ .
T Consensus 282 ~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~--~~lvi~G~g~---------~~~~~~l~~~~~~~~--~ 346 (473)
T TIGR02095 282 ELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLE--LG--GQLVVLGTGD---------PELEEALRELAERYP--G 346 (473)
T ss_pred HcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHH--cC--cEEEEECCCC---------HHHHHHHHHHHHHCC--C
Confidence 444433 78999999999999999999999999853 22 444 778764 123456667766654 5
Q ss_pred CEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccC------CcEEEeCCC
Q 001705 547 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKAL------NNGLLVDPH 620 (1024)
Q Consensus 547 ~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~------~~Gllv~p~ 620 (1024)
++.+.+.++.+++..+|+.| |++|+||.+||||++++|||+||+|||+++.||..|+|.++ .+|++++|.
T Consensus 347 ~v~~~~~~~~~~~~~~~~~a----Dv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~ 422 (473)
T TIGR02095 347 NVRVIIGYDEALAHLIYAGA----DFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEY 422 (473)
T ss_pred cEEEEEcCCHHHHHHHHHhC----CEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCC
Confidence 68887777788889999999 99999999999999999999999999999999999999988 899999999
Q ss_pred CHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Q 001705 621 DQNAIADALLKLLA----DKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHS 669 (1024)
Q Consensus 621 d~~~la~aI~~ll~----d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~ 669 (1024)
|+++++++|.+++. +++.++++++++++ +.|||+.++++|+++|+++
T Consensus 423 d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 423 DPGALLAALSRALRLYRQDPSLWEALQKNAMS--QDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhc--cCCCcHHHHHHHHHHHHhC
Confidence 99999999999988 99999999988763 6899999999999999863
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-38 Score=365.46 Aligned_cols=395 Identities=40% Similarity=0.632 Sum_probs=299.4
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||+|++.|+++-+. +.+++.||+++++.+|+++|+++| |+|+|+|.....+.. ... ...+
T Consensus 1 ~~~~~~~~~~~~~~----~~~~~~GG~~~~~~~l~~~L~~~g--~~V~v~~~~~~~~~~------~~~--------~~~~ 60 (398)
T cd03800 1 RIALISLHGSPLAQ----PGGADTGGQNVYVLELARALARLG--HEVDIFTRRIDDALP------PIV--------ELAP 60 (398)
T ss_pred CeEEEecccccccc----CCCCCCCceeehHHHHHHHHhccC--ceEEEEEecCCcccC------Ccc--------cccc
Confidence 58888888764332 224678999999999999999999 999999976432210 001 2335
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCE
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPM 330 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipi 330 (1024)
++.+++++..+. .+.++..+++++..|...+...+.. . ..+||+||+|++..+.++..+++..++|+
T Consensus 61 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~-----~~~~Div~~~~~~~~~~~~~~~~~~~~~~ 127 (398)
T cd03800 61 GVRVVRVPAGPA-EYLPKEELWPYLDEFADDLLRFLRR-------E-----GGRPDLIHAHYWDSGLVALLLARRLGIPL 127 (398)
T ss_pred ceEEEecccccc-cCCChhhcchhHHHHHHHHHHHHHh-------c-----CCCccEEEEecCccchHHHHHHhhcCCce
Confidence 899999987655 4455555666666555544333322 0 02799999999888888888888899999
Q ss_pred EEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhc
Q 001705 331 VLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQR 410 (1024)
Q Consensus 331 V~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~ 410 (1024)
|++.|+++......... ...+....++..|..+++.||.|++.|....+.+...+..
T Consensus 128 i~~~h~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~--------------- 184 (398)
T cd03800 128 VHTFHSLGAVKRRHLGA--------ADTYEPARRIEAEERLLRAADRVIASTPQEAEELYSLYGA--------------- 184 (398)
T ss_pred EEEeecccccCCccccc--------ccccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHHccc---------------
Confidence 99999875433211100 0001112223346778999999999999887776554321
Q ss_pred CccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCC
Q 001705 411 GVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKK 490 (1024)
Q Consensus 411 g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~K 490 (1024)
...++.+||||+|.+.|.+... . ...+..+...+++++|+++||+.+.|
T Consensus 185 -------~~~~~~vi~ng~~~~~~~~~~~----------------------~--~~~~~~~~~~~~~~~i~~~gr~~~~k 233 (398)
T cd03800 185 -------YPRRIRVVPPGVDLERFTPYGR----------------------A--EARRARLLRDPDKPRILAVGRLDPRK 233 (398)
T ss_pred -------cccccEEECCCCCccceecccc----------------------h--hhHHHhhccCCCCcEEEEEccccccc
Confidence 1126899999999988755431 0 00022223346788999999999999
Q ss_pred CHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcC
Q 001705 491 NVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKT 569 (1024)
Q Consensus 491 gi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~ 569 (1024)
|++.+++|+..+.+ ..+++.+ ++|++.... .......+..+++.+++.++|.|+|+++.+++..+|+.|
T Consensus 234 ~~~~ll~a~~~l~~--~~~~~~l~i~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a--- 303 (398)
T cd03800 234 GIDTLIRAYAELPE--LRERANLVIVGGPRDDI-----LAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAA--- 303 (398)
T ss_pred CHHHHHHHHHHHHH--hCCCeEEEEEECCCCcc-----hhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhC---
Confidence 99999999999863 2455555 667665321 122334577888889999999999999999999999999
Q ss_pred CcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 001705 570 KGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKN 649 (1024)
Q Consensus 570 ~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~ 649 (1024)
|++++||..|+||++++||||||+|||+++.||..|++.++.+|++++++|+++++++|.+++++++.+++++.++++.
T Consensus 304 -di~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a~~~ 382 (398)
T cd03800 304 -DVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRAGLRR 382 (398)
T ss_pred -CEEEecccccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred H-hcCCHHHHHHHHH
Q 001705 650 I-HRFSWPEHCRNYL 663 (1024)
Q Consensus 650 ~-~~fsw~~~a~~~l 663 (1024)
+ ++|||+.++++|+
T Consensus 383 ~~~~~s~~~~~~~~~ 397 (398)
T cd03800 383 ARARYTWERVAARLL 397 (398)
T ss_pred HHHhCCHHHHHHHHh
Confidence 9 7999999999886
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=365.18 Aligned_cols=445 Identities=21% Similarity=0.214 Sum_probs=285.1
Q ss_pred CceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCC--
Q 001705 168 RNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSD-- 245 (1024)
Q Consensus 168 ~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~-- 245 (1024)
++||||||+.+.. | -..+||..-++..|.++|+++| |+|.|+++....-.-...-......+.....
T Consensus 2 ~~~~il~v~~E~~--------p-~~k~ggl~dv~~~lp~~l~~~g--~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~ 70 (485)
T PRK14099 2 TPLRVLSVASEIF--------P-LIKTGGLADVAGALPAALKAHG--VEVRTLVPGYPAVLAGIEDAEQVHSFPDLFGGP 70 (485)
T ss_pred CCcEEEEEEeccc--------c-ccCCCcHHHHHHHHHHHHHHCC--CcEEEEeCCCcchhhhhcCceEEEEEeeeCCce
Confidence 3599999998843 4 3689999999999999999999 9999999976431100000000000000000
Q ss_pred ----CCCCCCeEEEEecCCCCCCcccccc-CC------cchHHHHHHHHHHHHHHHHHHHhhhcCC-CCCcceEEEEcCC
Q 001705 246 ----GTGSCGAYIIRIPCGARDKYIAKES-LW------PYIHEFVDGALNHIVNMARAIGEQVNGG-KPTWPYVIHGHYA 313 (1024)
Q Consensus 246 ----~~~~~gv~i~rip~~~~~~~~~k~~-lw------p~~~~f~~~~l~~~~~~~~~l~~~~~~g-~~~~pDvIh~h~~ 313 (1024)
....+|+.++-+... .++.... +. +|.+.+...+ -|+++..++.... ..++|||||+|+|
T Consensus 71 ~~~~~~~~~~v~~~~~~~~---~~f~r~~~~y~~~~~~~~~d~~~rf~-----~f~~a~~~~~~~~~~~~~pDIiH~Hdw 142 (485)
T PRK14099 71 ARLLAARAGGLDLFVLDAP---HLYDRPGNPYVGPDGKDWPDNAQRFA-----ALARAAAAIGQGLVPGFVPDIVHAHDW 142 (485)
T ss_pred EEEEEEEeCCceEEEEeCh---HhhCCCCCCCCCccCCCCCcHHHHHH-----HHHHHHHHHHhhhccCCCCCEEEECCc
Confidence 011245655555321 2222221 11 2222222221 1233333333221 1268999999999
Q ss_pred ChHHHHHHHHc--cCCCCEEEEeCCCchhh-h--HHHHhcCCCCcchh-hHHHHHHHHHHHHHhhhcCCEEEeCCHHHHH
Q 001705 314 DAGEVAAHLSG--ALNVPMVLTGHSLGRNK-F--EQLLKQGRLPKDIN-ASYKIMRRIEAEELGLDASEMVVTSTRQEIE 387 (1024)
Q Consensus 314 ~~~~~a~~l~~--~~~ipiV~t~H~l~~~~-~--~~l~~~g~~~~~i~-~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~ 387 (1024)
++++++.+++. ..++|+|+|+|++.... + ..+...|....... ....+...+...+..+..||.|+|+|+.+.+
T Consensus 143 ~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a~ 222 (485)
T PRK14099 143 QAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYAL 222 (485)
T ss_pred HHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHHH
Confidence 99999987763 24689999999974211 1 11111111111000 0011111122345678999999999999888
Q ss_pred HHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHH
Q 001705 388 MQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSE 467 (1024)
Q Consensus 388 ~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 467 (1024)
++...+.++ .++.+|+. +..++.+||||||++.|.|... ..+...+..+.+..+. ......
T Consensus 223 ei~~~~~g~--gl~~~l~~-----------~~~ki~vI~NGID~~~f~p~~~----~~~~~~~~~~~~~~k~--~~k~~l 283 (485)
T PRK14099 223 EIQGPEAGM--GLDGLLRQ-----------RADRLSGILNGIDTAVWNPATD----ELIAATYDVETLAARA--ANKAAL 283 (485)
T ss_pred HHhcccCCc--ChHHHHHh-----------hCCCeEEEecCCchhhcccccc----chhhhcCChhHHHhHH--HhHHHH
Confidence 865433221 11112211 2248999999999999987652 1111111000000000 000112
Q ss_pred HhhhhCC--CCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCC
Q 001705 468 VMRFFTN--PHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLY 545 (1024)
Q Consensus 468 ~~~~~~~--~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~ 545 (1024)
..++..+ ++.++|+++||+.+.||++.+++|+..+.+ ....+ +|+|+++. ++...+.+++.+++
T Consensus 284 ~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~~~~l-vivG~G~~---------~~~~~l~~l~~~~~-- 349 (485)
T PRK14099 284 QARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLG--EGAQL-ALLGSGDA---------ELEARFRAAAQAYP-- 349 (485)
T ss_pred HHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHh--cCcEE-EEEecCCH---------HHHHHHHHHHHHCC--
Confidence 2334443 357899999999999999999999998842 22222 47787642 23456667776664
Q ss_pred CCE-EeCCCCCCCCHHHHHH-HhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccC---------CcE
Q 001705 546 GQV-AYPKHHKQSDVPDIYR-LAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKAL---------NNG 614 (1024)
Q Consensus 546 ~~V-~~~g~~~~~el~~ly~-~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~---------~~G 614 (1024)
+++ .|+|+ .++++.+|. .| |+||+||.+||||++.+||||||+|+|++++||+.|+|.++ .+|
T Consensus 350 ~~v~~~~G~--~~~l~~~~~a~a----Difv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G 423 (485)
T PRK14099 350 GQIGVVIGY--DEALAHLIQAGA----DALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATG 423 (485)
T ss_pred CCEEEEeCC--CHHHHHHHHhcC----CEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCce
Confidence 345 68898 788999875 57 99999999999999999999999988889999999998765 589
Q ss_pred EEeCCCCHHHHHHHHHH---HHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhc
Q 001705 615 LLVDPHDQNAIADALLK---LLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNR 672 (1024)
Q Consensus 615 llv~p~d~~~la~aI~~---ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~ 672 (1024)
++|+|.|+++++++|.+ +++|++.|++++++++. ++|||+..+++|+++|++++..
T Consensus 424 ~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~~--~~fSw~~~a~~y~~lY~~l~~~ 482 (485)
T PRK14099 424 VQFSPVTADALAAALRKTAALFADPVAWRRLQRNGMT--TDVSWRNPAQHYAALYRSLVAE 482 (485)
T ss_pred EEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhhh--hcCChHHHHHHHHHHHHHHHhh
Confidence 99999999999999997 67799999999999873 7899999999999999998754
|
|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=367.07 Aligned_cols=433 Identities=17% Similarity=0.185 Sum_probs=286.9
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCC-cccCC-----Cccc-cCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVD-SSYGE-----PNEM-LSC 242 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~-~~y~~-----~~e~-l~~ 242 (1024)
|||+||+.+-. | -..|||..-.+..|.++|+++| |+|.|+++....-... ..... .... +..
T Consensus 6 ~~il~v~~E~~--------p-~~k~Ggl~dv~~~Lp~al~~~g--~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (489)
T PRK14098 6 FKVLYVSGEVS--------P-FVRVSALADFMASFPQALEEEG--FEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKE 74 (489)
T ss_pred cEEEEEeecch--------h-hcccchHHHHHHHHHHHHHHCC--CeEEEEcCCCCchhhhhhccccceEEEEEEEeecC
Confidence 99999998843 3 2579999999999999999999 9999999976432100 00000 0000 000
Q ss_pred CCCC------C--CCCCeEEEEecCCCCCCccccccCC-------cchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceE
Q 001705 243 PSDG------T--GSCGAYIIRIPCGARDKYIAKESLW-------PYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYV 307 (1024)
Q Consensus 243 ~~~~------~--~~~gv~i~rip~~~~~~~~~k~~lw-------p~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDv 307 (1024)
... . ...++.++-+... .++....+. +|.+.+...++ |+++..+.+.. ..++|||
T Consensus 75 -~~~~~~~~~~~~~~~~v~~~~~~~~---~~f~r~~~y~~~~~g~~~~d~~~rf~~-----f~~a~l~~~~~-~~~~pDi 144 (489)
T PRK14098 75 -KTDLLHVKVTALPSSKIQTYFLYNE---KYFKRNGLFTDMSLGGDLKGSAEKVIF-----FNVGVLETLQR-LGWKPDI 144 (489)
T ss_pred -eeEEEEEEEecccCCCceEEEEeCH---HHcCCCCcCCCCccCCCCCcHHHHHHH-----HHHHHHHHHHh-cCCCCCE
Confidence 000 0 0113444444321 233333222 12222222211 12222222221 1257999
Q ss_pred EEEcCCChHHHHHHHHccC-------CCCEEEEeCCCchhhhHHHHhcCCCCcchh------hHHHHH----HHHHHHHH
Q 001705 308 IHGHYADAGEVAAHLSGAL-------NVPMVLTGHSLGRNKFEQLLKQGRLPKDIN------ASYKIM----RRIEAEEL 370 (1024)
Q Consensus 308 Ih~h~~~~~~~a~~l~~~~-------~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~------~~y~~~----r~i~~e~~ 370 (1024)
||+|+|++++++.+++... ++|+|+|+|++.. +|.+..... ..+... ..+...+.
T Consensus 145 iH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~--------qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~ 216 (489)
T PRK14098 145 IHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYR--------QGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYT 216 (489)
T ss_pred EEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcc--------cCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHH
Confidence 9999999999999987653 7999999998742 222211000 000000 11223456
Q ss_pred hhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccc
Q 001705 371 GLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLI 450 (1024)
Q Consensus 371 ~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~ 450 (1024)
.+..||.|+++|+.+.+++... ..+.-.++.+|+.+ ..++.+||||||++.|.|... ..+...+
T Consensus 217 ~i~~ad~VitVS~~~a~ei~~~-~~~~~gl~~~l~~~-----------~~kl~~I~NGID~~~~~p~~d----~~~~~~~ 280 (489)
T PRK14098 217 GVEHADLLTTTSPRYAEEIAGD-GEEAFGLDKVLEER-----------KMRLHGILNGIDTRQWNPSTD----KLIKKRY 280 (489)
T ss_pred HHHhcCcceeeCHHHHHHhCcC-CCCCcChHHHHHhc-----------CCCeeEEeCCccccccCCccc----ccccccC
Confidence 7889999999999999987441 01111233333322 238999999999999987652 2222222
Q ss_pred cCccccccCCCCcchHHHhhhhC--CCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCccccccc
Q 001705 451 GNDRTQSKRNLPPMWSEVMRFFT--NPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNS 527 (1024)
Q Consensus 451 ~~~~~~~~~~~p~~~~~~~~~~~--~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~ 527 (1024)
+.+.+..+. ........++.. .++.++|+++||+.+.||++.+++|+.++.+ .++.| |+|+++.
T Consensus 281 ~~~~~~~k~--~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~----~~~~lvivG~G~~------- 347 (489)
T PRK14098 281 SIERLDGKL--ENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE----LDIQLVICGSGDK------- 347 (489)
T ss_pred CcchhhhHH--HHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh----cCcEEEEEeCCCH-------
Confidence 100000000 001112233333 2467899999999999999999999999853 24554 7787652
Q ss_pred chHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhh
Q 001705 528 SSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDI 607 (1024)
Q Consensus 528 ~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~ei 607 (1024)
.+...+.+++.+++ ++|.|.+.++.+++..+|+.| |+||+||.+||||++.+|||+||+|+|++++||..|+
T Consensus 348 --~~~~~l~~l~~~~~--~~V~~~g~~~~~~~~~~~a~a----Di~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~ 419 (489)
T PRK14098 348 --EYEKRFQDFAEEHP--EQVSVQTEFTDAFFHLAIAGL----DMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVET 419 (489)
T ss_pred --HHHHHHHHHHHHCC--CCEEEEEecCHHHHHHHHHhC----CEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCcee
Confidence 24567777777764 689999999888899999999 9999999999999999999999999999999999998
Q ss_pred hcc----CCcEEEeCCCCHHHHHHHHHHHH---hCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Q 001705 608 LKA----LNNGLLVDPHDQNAIADALLKLL---ADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSR 670 (1024)
Q Consensus 608 i~~----~~~Gllv~p~d~~~la~aI~~ll---~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~ 670 (1024)
+.+ +.+|+++++.|+++++++|.+++ .+++.|+++++++++ +.|||+..+++|+++|++++
T Consensus 420 v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~y~~lY~~~~ 487 (489)
T PRK14098 420 IEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEAME--RDFSWKNSAEEYAQLYRELL 487 (489)
T ss_pred eecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--CCCChHHHHHHHHHHHHHHh
Confidence 864 67999999999999999999865 588888888776643 69999999999999999875
|
|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-37 Score=364.59 Aligned_cols=376 Identities=19% Similarity=0.209 Sum_probs=271.3
Q ss_pred CCceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCC
Q 001705 167 SRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDG 246 (1024)
Q Consensus 167 ~~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~ 246 (1024)
.++|||++++.. .| ++..||.+.++.+|+++|.++| |+|+|+|.....+.
T Consensus 56 ~~~mrI~~~~~~---------~~-~~~~gG~~~~~~~l~~~L~~~G--~eV~vlt~~~~~~~------------------ 105 (465)
T PLN02871 56 SRPRRIALFVEP---------SP-FSYVSGYKNRFQNFIRYLREMG--DEVLVVTTDEGVPQ------------------ 105 (465)
T ss_pred CCCceEEEEECC---------cC-CcccccHHHHHHHHHHHHHHCC--CeEEEEecCCCCCc------------------
Confidence 456999999732 12 3568999999999999999999 99999998632111
Q ss_pred CCCCCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC-hHHHHHHHHcc
Q 001705 247 TGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYAD-AGEVAAHLSGA 325 (1024)
Q Consensus 247 ~~~~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~-~~~~a~~l~~~ 325 (1024)
...|+.+++++..+. ..... ..+.+ .+.. .+.+.+.+ .+||+||+|... ..+.+..+++.
T Consensus 106 -~~~g~~v~~~~~~~~-~~~~~-~~~~~--~~~~-------~l~~~i~~-------~kpDiIh~~~~~~~~~~~~~~ak~ 166 (465)
T PLN02871 106 -EFHGAKVIGSWSFPC-PFYQK-VPLSL--ALSP-------RIISEVAR-------FKPDLIHASSPGIMVFGALFYAKL 166 (465)
T ss_pred -cccCceeeccCCcCC-ccCCC-ceeec--cCCH-------HHHHHHHh-------CCCCEEEECCCchhHHHHHHHHHH
Confidence 112556555442211 01111 00000 0000 11222222 479999999864 34445556777
Q ss_pred CCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHH
Q 001705 326 LNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLR 405 (1024)
Q Consensus 326 ~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~ 405 (1024)
.++|+|++.|+........+ .+ ...++.+ ...++.+++.+|.|+++|+...+.+...+.
T Consensus 167 ~~ip~V~~~h~~~~~~~~~~----~~----~~~~~~~--~~~~r~~~~~ad~ii~~S~~~~~~l~~~~~----------- 225 (465)
T PLN02871 167 LCVPLVMSYHTHVPVYIPRY----TF----SWLVKPM--WDIIRFLHRAADLTLVTSPALGKELEAAGV----------- 225 (465)
T ss_pred hCCCEEEEEecCchhhhhcc----cc----hhhHHHH--HHHHHHHHhhCCEEEECCHHHHHHHHHcCC-----------
Confidence 89999999997644322111 00 0011111 112455688999999999987776544321
Q ss_pred HhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhh-CCCCCcEEEEEe
Q 001705 406 VRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFF-TNPHKPTILALS 484 (1024)
Q Consensus 406 ~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~Il~vg 484 (1024)
....++.+||||+|.+.|.|... . .....++. ..+++++|+++|
T Consensus 226 -----------~~~~kv~vi~nGvd~~~f~p~~~---~---------------------~~~~~~~~~~~~~~~~i~~vG 270 (465)
T PLN02871 226 -----------TAANRIRVWNKGVDSESFHPRFR---S---------------------EEMRARLSGGEPEKPLIVYVG 270 (465)
T ss_pred -----------CCcCeEEEeCCccCccccCCccc---c---------------------HHHHHHhcCCCCCCeEEEEeC
Confidence 11238999999999998866431 0 00111111 135678999999
Q ss_pred CCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHH
Q 001705 485 RPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIY 563 (1024)
Q Consensus 485 Rld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly 563 (1024)
|+.+.||++.+++++..+ +++.| |+|+++. ..++.+++.. .+|.|+|+++.+++..+|
T Consensus 271 rl~~~K~~~~li~a~~~~------~~~~l~ivG~G~~-----------~~~l~~~~~~----~~V~f~G~v~~~ev~~~~ 329 (465)
T PLN02871 271 RLGAEKNLDFLKRVMERL------PGARLAFVGDGPY-----------REELEKMFAG----TPTVFTGMLQGDELSQAY 329 (465)
T ss_pred CCchhhhHHHHHHHHHhC------CCcEEEEEeCChH-----------HHHHHHHhcc----CCeEEeccCCHHHHHHHH
Confidence 999999999999999876 34454 7887753 2344555543 369999999999999999
Q ss_pred HHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhcc---CCcEEEeCCCCHHHHHHHHHHHHhCHHHHH
Q 001705 564 RLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKA---LNNGLLVDPHDQNAIADALLKLLADKNMWS 640 (1024)
Q Consensus 564 ~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~---~~~Gllv~p~d~~~la~aI~~ll~d~~~~~ 640 (1024)
+.| |+||+||..|+||++++||||||+|||+|+.||..|++.+ +.+|++++|+|+++++++|.+++++++.++
T Consensus 330 ~~a----Dv~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~ 405 (465)
T PLN02871 330 ASG----DVFVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLADPELRE 405 (465)
T ss_pred HHC----CEEEECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhCHHHHH
Confidence 999 9999999999999999999999999999999999999998 899999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHH-HHHHhhhc
Q 001705 641 ECRKNGLKNIHRFSWPEHCRNYLS-HVEHSRNR 672 (1024)
Q Consensus 641 ~~~~~~~~~~~~fsw~~~a~~~l~-~~~~~~~~ 672 (1024)
++++++++.+++|||+..++++++ .|.++...
T Consensus 406 ~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 406 RMGAAAREEVEKWDWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998 68887765
|
|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-37 Score=357.01 Aligned_cols=367 Identities=20% Similarity=0.224 Sum_probs=270.7
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++++.... |..||.++++.+|+++|+++| |+|+|+|+....+. ..+ ....
T Consensus 1 kI~~v~~~~~-----------p~~GG~e~~~~~la~~L~~~G--~~V~v~~~~~~~~~-------~~~--------~~~~ 52 (398)
T cd03796 1 RICMVSDFFY-----------PNLGGVETHIYQLSQCLIKRG--HKVVVITHAYGNRV-------GIR--------YLTN 52 (398)
T ss_pred CeeEEeeccc-----------cccccHHHHHHHHHHHHHHcC--CeeEEEeccCCcCC-------Ccc--------cccC
Confidence 6899996532 678999999999999999999 99999998632110 011 2235
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCh--HHHHHHHHccCCC
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADA--GEVAAHLSGALNV 328 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~--~~~a~~l~~~~~i 328 (1024)
|+.++++|..+. .+....+.+..+. ..+.+.+.+ .+|||||+|+... ...+.++++..++
T Consensus 53 ~i~v~~~p~~~~----~~~~~~~~~~~~~-------~~l~~~~~~-------~~~DiIh~~~~~~~~~~~~~~~~~~~~~ 114 (398)
T cd03796 53 GLKVYYLPFVVF----YNQSTLPTFFGTF-------PLLRNILIR-------ERITIVHGHQAFSALAHEALLHARTMGL 114 (398)
T ss_pred ceeEEEecceec----cCCccccchhhhH-------HHHHHHHHh-------cCCCEEEECCCCchHHHHHHHHhhhcCC
Confidence 889999885322 1111111111111 111122222 4799999998643 3345666778899
Q ss_pred CEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhh
Q 001705 329 PMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRR 408 (1024)
Q Consensus 329 piV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~ 408 (1024)
|+|+|.|+++... .... ....+ ..+..++.+|.++++|+...+.+.... .+
T Consensus 115 ~~v~t~h~~~~~~------------~~~~--~~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~-~~------------ 165 (398)
T cd03796 115 KTVFTDHSLFGFA------------DASS--IHTNK--LLRFSLADVDHVICVSHTSKENTVLRA-SL------------ 165 (398)
T ss_pred cEEEEeccccccc------------chhh--HHhhH--HHHHhhccCCEEEEecHhHhhHHHHHh-CC------------
Confidence 9999999863210 0000 00111 234568899999999987665421111 11
Q ss_pred hcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCC
Q 001705 409 QRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDP 488 (1024)
Q Consensus 409 ~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~ 488 (1024)
...++.+||||+|.+.|.+... . ..+++++|+++||+.+
T Consensus 166 ---------~~~k~~vi~ngvd~~~f~~~~~----------------------~----------~~~~~~~i~~~grl~~ 204 (398)
T cd03796 166 ---------DPERVSVIPNAVDSSDFTPDPS----------------------K----------RDNDKITIVVISRLVY 204 (398)
T ss_pred ---------ChhhEEEEcCccCHHHcCCCcc----------------------c----------CCCCceEEEEEeccch
Confidence 1138999999999887765431 0 1256789999999999
Q ss_pred CCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhh
Q 001705 489 KKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAA 567 (1024)
Q Consensus 489 ~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~ 567 (1024)
.||++.+++|+..+. +..+++.+ ++|+++. ...+.++++++++.++|.|+|+++.+++..+|+.|
T Consensus 205 ~Kg~~~li~a~~~l~--~~~~~~~l~i~G~g~~-----------~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~a- 270 (398)
T cd03796 205 RKGIDLLVGIIPEIC--KKHPNVRFIIGGDGPK-----------RILLEEMREKYNLQDRVELLGAVPHERVRDVLVQG- 270 (398)
T ss_pred hcCHHHHHHHHHHHH--hhCCCEEEEEEeCCch-----------HHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhC-
Confidence 999999999999885 34567776 7787653 35577888999999999999999999999999999
Q ss_pred cCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 001705 568 KTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGL 647 (1024)
Q Consensus 568 ~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~ 647 (1024)
|++|+||..|+||++++||||||+|||+|+.||..|++.++ .++++++ |.++++++|.+++.++.+...++.+++
T Consensus 271 ---d~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~-~~~~~~~-~~~~l~~~l~~~l~~~~~~~~~~~~~~ 345 (398)
T cd03796 271 ---HIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPD-MILLAEP-DVESIVRKLEEAISILRTGKHDPWSFH 345 (398)
T ss_pred ---CEEEeCChhhccCHHHHHHHHcCCCEEECCCCCchhheeCC-ceeecCC-CHHHHHHHHHHHHhChhhhhhHHHHHH
Confidence 99999999999999999999999999999999999999764 4555544 899999999999998877777888888
Q ss_pred HHH-hcCCHHHHHHHHHHHHHHhhhc
Q 001705 648 KNI-HRFSWPEHCRNYLSHVEHSRNR 672 (1024)
Q Consensus 648 ~~~-~~fsw~~~a~~~l~~~~~~~~~ 672 (1024)
+.+ ++|||+..+++|+++|++++..
T Consensus 346 ~~~~~~fs~~~~~~~~~~~y~~l~~~ 371 (398)
T cd03796 346 NRVKKMYSWEDVAKRTEKVYDRILQT 371 (398)
T ss_pred HHHHhhCCHHHHHHHHHHHHHHHhcC
Confidence 888 6999999999999999998753
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-40 Score=371.15 Aligned_cols=474 Identities=33% Similarity=0.417 Sum_probs=341.4
Q ss_pred cccccc-cCcccccc--CCCC-CcccccCccccccc-----ccccccccccCCCceEEEEEecccccccCCCCCCCCCCC
Q 001705 124 ADDLSE-LSEGEKEK--GDSI-NASESLKEIPRINS-----DMQIWSEDDKSSRNLYIVLISMHGLVRGDNMEIGRDSDT 194 (1024)
Q Consensus 124 ~~~~~~-~~~~~~~~--~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~mkIl~is~~~~~~~~~~~~gr~~~~ 194 (1024)
+.|+++ +++++|.. +... ......+..|.+.. .+..|+.+.+.-.-+.+++. |++ ++| .+++
T Consensus 2 ~~~~~~~~~~~qk~~~~~m~~~~~~~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s-------~~~-~lg-~~d~ 72 (495)
T KOG0853|consen 2 TNDSSSNISELQKVLWKAMIEKSLLVSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS-------GQD-VLG-LPDT 72 (495)
T ss_pred cchhhhHHHHhhhhhhhhhhhhhcccccccccchhheeeccccccCchHHHhHHHHHHHHh-------ccc-ccC-CCCC
Confidence 345555 88888876 2222 11112233333333 55678877621111333333 567 799 8999
Q ss_pred ChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCCeEEEEecCCCCCCccccccCCcc
Q 001705 195 GGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWPY 274 (1024)
Q Consensus 195 GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~lwp~ 274 (1024)
||++.|+++.+++|. .+.++++...|++..-+.....+..|..+...........+++++++|+++..++. +.+||+
T Consensus 73 G~qV~~l~~h~~al~-~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~~~~~~~~~~~~~~il~~~~~~~~k~~--~~~d~~ 149 (495)
T KOG0853|consen 73 GGQVVYLTSHEDALE-MPLLLRCFAETLDGTPPILVVGDWLPRAMGQFLEQVAGCAYLRILRIPFGILFKWA--EKVDPI 149 (495)
T ss_pred CceEEEEehhhhhhc-chHHHHHHHHHhcCCCceEEEEeecCcccchhhhhhhccceeEEEEeccchhhhhh--hhhcee
Confidence 999999999999995 44444444444443222222222233332100011144569999999998876666 779999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcc
Q 001705 275 IHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKD 354 (1024)
Q Consensus 275 ~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~ 354 (1024)
+..|++...-.. +++. . ||++|.+++.......+++++.|++.+++.|.++..+.++...+++ .
T Consensus 150 i~d~~~~~~~l~--------~~~~----~-p~~~~~i~~~~h~~~~lla~r~g~~~~l~~~~l~~~e~e~~~~~~~---~ 213 (495)
T KOG0853|consen 150 IEDFVSACVPLL--------KQLS----G-PDVIIKIYFYCHFPDSLLAKRLGVLKVLYRHALDKIEEETTGLAWK---I 213 (495)
T ss_pred ecchHHHHHHHH--------HHhc----C-CcccceeEEeccchHHHhccccCccceeehhhhhhhhhhhhhccce---E
Confidence 999985433322 2222 2 9999999999999999999999999999999999999887655544 6
Q ss_pred hhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCc
Q 001705 355 INASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYV 434 (1024)
Q Consensus 355 i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f 434 (1024)
+...|.+.+++..+...+..+| ++++.+++...|..++.|....+..+..|..+|+.+.+++++++..|++|.|.
T Consensus 214 ~~ns~~~~~~f~~~~~~L~~~d--~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~~d~~~~siN~~~pgkd~--- 288 (495)
T KOG0853|consen 214 LVNSYFTKRQFKATFVSLSNSD--ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSGIDRFFPSINRFEPGKDQ--- 288 (495)
T ss_pred ecchhhhhhhhhhhhhhcCCCC--cceeeccccchhccccccccchhcccccceeeeecccceEeeeeeecCCCCCc---
Confidence 7788999999999999999999 88888899988888888877766666666556666555555555555555554
Q ss_pred cccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCC---CCcE
Q 001705 435 TTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRE---LANM 511 (1024)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~---~~~l 511 (1024)
+.+++||..+...-+ .+..
T Consensus 289 ----------------------------------------------------------~l~l~a~~~~~~~i~~~~~~~~ 310 (495)
T KOG0853|consen 289 ----------------------------------------------------------DLALPAFTLLHDSIPEPSISSE 310 (495)
T ss_pred ----------------------------------------------------------eeehhhHHhhhcccCCCCCCce
Confidence 444445554432221 1344
Q ss_pred EE-EEecCCCcccccccchHHHHHHHHHHHHcCCCC-CEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHH
Q 001705 512 TL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYG-QVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEA 589 (1024)
Q Consensus 512 ~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~-~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEA 589 (1024)
.+ ++|+. .+++..+++-+++.++..+++++++.+ .|.|+.++++.+. |+.++.++.+|+.|+. |.||+|.+||
T Consensus 311 hl~~~g~~-G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~---yrl~adt~~v~~qPa~-E~FGiv~IEA 385 (495)
T KOG0853|consen 311 HLVVAGSR-GYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAK---YRLAADTKGVLYQPAN-EHFGIVPIEA 385 (495)
T ss_pred EEEEecCC-CccccchhhHHHHHHHHHHHHHhCccCceEEEecCCchHHH---HHHHHhcceEEecCCC-CCccceeHHH
Confidence 45 44432 267888899999999999999999964 4556688766655 7777777889999988 9999999999
Q ss_pred HHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHH---HHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHH
Q 001705 590 AAYGLPVVATKNGGPVDILKALNNGLLVDPHDQN---AIADALLKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYLSH 665 (1024)
Q Consensus 590 mA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~---~la~aI~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~ 665 (1024)
||||+|||||++||+.|+|.++.+|++++| +.+ .+|++|.++.+||++|.+|+++|++++ +.|+| +.|.+.
T Consensus 386 Ma~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~a~~~~kl~~~p~l~~~~~~~G~~rV~e~fs~----~~~~~r 460 (495)
T KOG0853|consen 386 MACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAELADALLKLRRDPELWARMGKNGLKRVKEMFSW----QHYSER 460 (495)
T ss_pred HhcCCCEEEecCCCceEEEEcCCcceeeCC-chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhH----HHHHHH
Confidence 999999999999999999999999999999 666 699999999999999999999999999 57999 455556
Q ss_pred HHHhhhcCCCCCccccCCCCCCCCCccccccccccccccc
Q 001705 666 VEHSRNRHPNSHLEIMTIPGEPLSDSLRDVEDFSLRFSME 705 (1024)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~s~~~s~~ 705 (1024)
+.+++.+.++|+. .+..+++++.+++|+++++.
T Consensus 461 i~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 493 (495)
T KOG0853|consen 461 IASVLGKYLQWEK-------VSSLDSLEDRRYISLFYALS 493 (495)
T ss_pred HHHHhHhcCCccc-------ccccccccccccHHHHHHhh
Confidence 6666666777765 22378888999999776653
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=350.60 Aligned_cols=377 Identities=23% Similarity=0.278 Sum_probs=272.9
Q ss_pred eEEEEEecccccccCCCCCCCCCC-CChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSD-TGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTG 248 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~-~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~ 248 (1024)
|||++|+.. || |+ .||.+.++.+|+++|.+. ++|+|+|.... . ..
T Consensus 1 mkI~~i~~~---------~~--p~~~GG~~~~v~~l~~~l~~~---~~v~v~~~~~~--~------------------~~ 46 (388)
T TIGR02149 1 MKVTVLTRE---------YP--PNVYGGAGVHVEELTRELARL---MDVDVRCFGDQ--R------------------FD 46 (388)
T ss_pred CeeEEEecc---------cC--ccccccHhHHHHHHHHHHHHh---cCeeEEcCCCc--h------------------hc
Confidence 899999966 44 54 599999999999999886 67777765421 0 11
Q ss_pred CCCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCC
Q 001705 249 SCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNV 328 (1024)
Q Consensus 249 ~~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~i 328 (1024)
.+|+.+++++.... .......+..+.. .+. . .. ...+||+||+|.+..+..+.++++..++
T Consensus 47 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-------~~~----~-~~--~~~~~divh~~~~~~~~~~~~~~~~~~~ 107 (388)
T TIGR02149 47 SEGLTVKGYRPWSE-----LKEANKALGTFSV-------DLA----M-AN--DPVDADVVHSHTWYTFLAGHLAKKLYDK 107 (388)
T ss_pred CCCeEEEEecChhh-----ccchhhhhhhhhH-------HHH----H-hh--CCCCCCeEeecchhhhhHHHHHHHhcCC
Confidence 23778877763211 0001111111100 000 0 00 1136999999998777777777777799
Q ss_pred CEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhh
Q 001705 329 PMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRR 408 (1024)
Q Consensus 329 piV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~ 408 (1024)
|+|++.|++.+...... . .....|.+...+ +...++.||.|++.|+...+.+...|+++..
T Consensus 108 p~v~~~h~~~~~~~~~~---~----~~~~~~~~~~~~--~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~---------- 168 (388)
T TIGR02149 108 PLVVTAHSLEPLRPWKE---E----QLGGGYKLSSWA--EKTAIEAADRVIAVSGGMREDILKYYPDLDP---------- 168 (388)
T ss_pred CEEEEeecccccccccc---c----ccccchhHHHHH--HHHHHhhCCEEEEccHHHHHHHHHHcCCCCc----------
Confidence 99999998743211000 0 001112222222 5678899999999999877776554433222
Q ss_pred hcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCC
Q 001705 409 QRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDP 488 (1024)
Q Consensus 409 ~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~ 488 (1024)
.++.+||||+|...+.+... .....++...+++++|+++||+.+
T Consensus 169 -----------~~i~vi~ng~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~i~~~Grl~~ 212 (388)
T TIGR02149 169 -----------EKVHVIYNGIDTKEYKPDDG-------------------------NVVLDRYGIDRSRPYILFVGRITR 212 (388)
T ss_pred -----------ceEEEecCCCChhhcCCCch-------------------------HHHHHHhCCCCCceEEEEEccccc
Confidence 28999999999987754321 112233444567889999999999
Q ss_pred CCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCC-CCCEEe-CCCCCCCCHHHHHHHh
Q 001705 489 KKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDL-YGQVAY-PKHHKQSDVPDIYRLA 566 (1024)
Q Consensus 489 ~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l-~~~V~~-~g~~~~~el~~ly~~A 566 (1024)
.||++.+++|+.++. +...+ +++|++++. .++...+.+.+..++. .++|.| .+.++.+++..+|+.|
T Consensus 213 ~Kg~~~li~a~~~l~---~~~~l-~i~g~g~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~a 281 (388)
T TIGR02149 213 QKGVPHLLDAVHYIP---KDVQV-VLCAGAPDT-------PEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNA 281 (388)
T ss_pred ccCHHHHHHHHHHHh---hcCcE-EEEeCCCCc-------HHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhC
Confidence 999999999999884 22333 355555432 2345667777777765 234665 5789999999999999
Q ss_pred hcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCH------HHHHHHHHHHHhCHHHHH
Q 001705 567 AKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQ------NAIADALLKLLADKNMWS 640 (1024)
Q Consensus 567 ~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~------~~la~aI~~ll~d~~~~~ 640 (1024)
|++|+||..|+||++++||||||+|||+|+.||..|++.++.+|+++++.|. ++++++|.+++++++.++
T Consensus 282 ----Dv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~ 357 (388)
T TIGR02149 282 ----EVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPELAK 357 (388)
T ss_pred ----CEEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhCHHHHH
Confidence 9999999999999999999999999999999999999999999999999998 999999999999999999
Q ss_pred HHHHHHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001705 641 ECRKNGLKNI-HRFSWPEHCRNYLSHVEHS 669 (1024)
Q Consensus 641 ~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~ 669 (1024)
+++.++++.+ ++|||+.++++|.+.|+++
T Consensus 358 ~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 358 KMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 9999999998 6999999999999999875
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=361.30 Aligned_cols=355 Identities=18% Similarity=0.190 Sum_probs=272.5
Q ss_pred CeEEEEecCCCC-----CCccccccCCcchHHHHH----------HHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCh
Q 001705 251 GAYIIRIPCGAR-----DKYIAKESLWPYIHEFVD----------GALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADA 315 (1024)
Q Consensus 251 gv~i~rip~~~~-----~~~~~k~~lwp~~~~f~~----------~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~ 315 (1024)
+...+.++..+. ..+++|..+||.+|++.+ .....++.|++++.+.++++ |+||+|+++.
T Consensus 64 ~~~~~~v~l~~~~~~~~y~gf~n~~lWPl~H~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~-----d~vwvhDYhl 138 (456)
T TIGR02400 64 KITLAPVFLSEEDVDGYYNGFSNSTLWPLFHYRPDLIRYDRKAWEAYRRVNRLFAEALAPLLQPG-----DIVWVHDYHL 138 (456)
T ss_pred CceEEEEECCHHHHHHHHHHhhhhhcchhhcccccccccCHHHHHHHHHHHHHHHHHHHHhCCCC-----CEEEEecchh
Confidence 445555554332 245799999999987532 33344577888888888765 9999999999
Q ss_pred HHHHHHHHccC-CCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhh---cCCEEEeCCHHHHHHHHh
Q 001705 316 GEVAAHLSGAL-NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLD---ASEMVVTSTRQEIEMQWG 391 (1024)
Q Consensus 316 ~~~a~~l~~~~-~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~---~Ad~Vi~~S~~~~~~~~~ 391 (1024)
.+++.++++.. ..++.|+.| .+++...+++.+++.+.+++ .||+|+++|..++++
T Consensus 139 ~l~p~~lr~~~~~~~igfFlH------------------ipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~--- 197 (456)
T TIGR02400 139 MLLPAMLRELGVQNKIGFFLH------------------IPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARN--- 197 (456)
T ss_pred hHHHHHHHhhCCCCeEEEEEe------------------CCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHH---
Confidence 99999999875 679999999 66677778888887776666 999999999999998
Q ss_pred cccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcch---HHH
Q 001705 392 LYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMW---SEV 468 (1024)
Q Consensus 392 ~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---~~~ 468 (1024)
|...+.++++.....+-..++.+..++.+||||||++.|.+... .+... ..+
T Consensus 198 ----Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~---------------------~~~~~~~~~~l 252 (456)
T TIGR02400 198 ----FLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAK---------------------KPSVQKRIAEL 252 (456)
T ss_pred ----HHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhc---------------------ChhHHHHHHHH
Confidence 66777777776555433334445558999999999999976542 11111 112
Q ss_pred hhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCc----EEE-EE-----ecCCCcccccccchHHHHHHHHH
Q 001705 469 MRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELAN----MTL-IL-----GNRDDIEDMSNSSSVVLTTVLKL 538 (1024)
Q Consensus 469 ~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~L-Iv-----G~~~~~~~l~~~~~~~~~~i~~~ 538 (1024)
+..+ +++++|+++||+++.||++.+++||+.+. ..+|+ ++| ++ |+++.++++.....+..++|+..
T Consensus 253 r~~~--~~~~vIl~VgRLd~~KGi~~ll~A~~~ll--~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~ 328 (456)
T TIGR02400 253 RESL--KGRKLIIGVDRLDYSKGLPERLLAFERFL--EEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGR 328 (456)
T ss_pred HHHc--CCCeEEEEccccccccCHHHHHHHHHHHH--HhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhc
Confidence 2222 57889999999999999999999999984 34443 444 33 23344444443333444444444
Q ss_pred HHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCc----EEEcCCCCchhhhccCCcE
Q 001705 539 IDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLP----VVATKNGGPVDILKALNNG 614 (1024)
Q Consensus 539 i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~P----VVat~~Gg~~eii~~~~~G 614 (1024)
.+..++.+.+.+.+.++.+++.++|+.| |+||+||.+||||++++||||||+| +|+|+.+|..+.+. +|
T Consensus 329 ~~~~~~~pv~~l~~~~~~~el~aly~aa----Dv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~g 401 (456)
T TIGR02400 329 FGTLDWTPIRYLNRSYDREELMALYRAA----DVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GA 401 (456)
T ss_pred cCCCCCccEEEEcCCCCHHHHHHHHHhC----cEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHhC---Cc
Confidence 4455666777788899999999999999 9999999999999999999999999 89988888777763 79
Q ss_pred EEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 001705 615 LLVDPHDQNAIADALLKLLAD-KNMWSECRKNGLKNIHRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 615 llv~p~d~~~la~aI~~ll~d-~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~ 667 (1024)
++|+|+|++++|+||.+++++ +++++++.+.+++.+.+||+..|+++|++.+.
T Consensus 402 llVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 402 LLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred EEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 999999999999999999994 56778888888888888999999999998764
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=343.76 Aligned_cols=278 Identities=20% Similarity=0.267 Sum_probs=226.8
Q ss_pred CcceEEEEcCCChHHHHHHHHc--cCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEe
Q 001705 303 TWPYVIHGHYADAGEVAAHLSG--ALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVT 380 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~a~~l~~--~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~ 380 (1024)
.+||+||+|++..+..+.++++ .++.|+++|.|+...... .....|. ...+..++.||.|++
T Consensus 117 ~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~-----------~~~~~~~-----~~~~~~~~~ad~vv~ 180 (406)
T PRK15427 117 FVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSR-----------EVLNHYT-----PEYQQLFRRGDLMLP 180 (406)
T ss_pred CCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccc-----------hhhhhhh-----HHHHHHHHhCCEEEE
Confidence 4799999999988888887776 445678999997521100 0001111 113446789999999
Q ss_pred CCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCC
Q 001705 381 STRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRN 460 (1024)
Q Consensus 381 ~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1024)
+|+...+.+... +. +..++.+||||+|.+.|.+... .
T Consensus 181 ~S~~~~~~l~~~--g~---------------------~~~ki~vi~nGvd~~~f~~~~~--------------------~ 217 (406)
T PRK15427 181 ISDLWAGRLQKM--GC---------------------PPEKIAVSRMGVDMTRFSPRPV--------------------K 217 (406)
T ss_pred CCHHHHHHHHHc--CC---------------------CHHHEEEcCCCCCHHHcCCCcc--------------------c
Confidence 999777765332 11 1238999999999988854331 0
Q ss_pred CCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHH
Q 001705 461 LPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLI 539 (1024)
Q Consensus 461 ~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i 539 (1024)
...+...|+++||+.+.||++.+++|+..+. ...+++.+ |+|+|+. ..++.+++
T Consensus 218 ------------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~--~~~~~~~l~ivG~G~~-----------~~~l~~~~ 272 (406)
T PRK15427 218 ------------APATPLEIISVARLTEKKGLHVAIEACRQLK--EQGVAFRYRILGIGPW-----------ERRLRTLI 272 (406)
T ss_pred ------------cCCCCeEEEEEeCcchhcCHHHHHHHHHHHH--hhCCCEEEEEEECchh-----------HHHHHHHH
Confidence 0123567999999999999999999999985 34566766 7888753 46678899
Q ss_pred HHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCC------CCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCc
Q 001705 540 DKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALV------EPFGLTIIEAAAYGLPVVATKNGGPVDILKALNN 613 (1024)
Q Consensus 540 ~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~------Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~ 613 (1024)
+++++.++|.|+|+++++++.++|+.| |+||+||.. ||||++++||||||+|||+|+.||..|++.++.+
T Consensus 273 ~~~~l~~~V~~~G~~~~~el~~~l~~a----Dv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~ 348 (406)
T PRK15427 273 EQYQLEDVVEMPGFKPSHEVKAMLDDA----DVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKS 348 (406)
T ss_pred HHcCCCCeEEEeCCCCHHHHHHHHHhC----CEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCc
Confidence 999999999999999999999999999 999999974 9999999999999999999999999999999999
Q ss_pred EEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHH
Q 001705 614 GLLVDPHDQNAIADALLKLLA-DKNMWSECRKNGLKNI-HRFSWPEHCRNYLSHVEH 668 (1024)
Q Consensus 614 Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~ 668 (1024)
|++++|+|+++++++|.++++ |+++++++++++++.+ ++|||+..++++.++|++
T Consensus 349 G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 349 GWLVPENDAQALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred eEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999999999999999999999 9999999999999999 699999999999999875
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=338.54 Aligned_cols=365 Identities=23% Similarity=0.336 Sum_probs=264.2
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGS 249 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~ 249 (1024)
|||++++ + |..||.++++.+|+++|.+.| |+|+|+|.... . ... ...
T Consensus 1 mki~~~~-~-------------p~~gG~~~~~~~la~~L~~~G--~~v~v~~~~~~--~------~~~---------~~~ 47 (371)
T cd04962 1 MKIGIVC-Y-------------PTYGGSGVVATELGKALARRG--HEVHFITSSRP--F------RLD---------EYS 47 (371)
T ss_pred CceeEEE-E-------------eCCCCccchHHHHHHHHHhcC--CceEEEecCCC--c------chh---------hhc
Confidence 7999998 2 457999999999999999999 99999987521 0 000 112
Q ss_pred CCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHH----cc
Q 001705 250 CGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLS----GA 325 (1024)
Q Consensus 250 ~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~----~~ 325 (1024)
+++.++.++.... +.. .++. +.......+.+.+.+ .+||+||+|++.....+..++ +.
T Consensus 48 ~~~~~~~~~~~~~----~~~-~~~~------~~~~~~~~l~~~i~~-------~~~divh~~~~~~~~~~~~~~~~~~~~ 109 (371)
T cd04962 48 PNIFFHEVEVPQY----PLF-QYPP------YDLALASKIAEVAKR-------YKLDLLHVHYAVPHAVAAYLAREILGK 109 (371)
T ss_pred cCeEEEEeccccc----chh-hcch------hHHHHHHHHHHHHhc-------CCccEEeecccCCccHHHHHHHHhcCc
Confidence 3555544432111 000 0110 011112222333322 579999999864332222222 22
Q ss_pred CCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHH
Q 001705 326 LNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLR 405 (1024)
Q Consensus 326 ~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~ 405 (1024)
.++|+|++.|+..... .+. ...+ +. .++..++.+|.|++.|+...+.+.+.+.
T Consensus 110 ~~~~~i~~~h~~~~~~------~~~-----~~~~---~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~----------- 162 (371)
T cd04962 110 KDLPVVTTLHGTDITL------VGQ-----DPSF---QP--ATRFSIEKSDGVTAVSESLRQETYELFD----------- 162 (371)
T ss_pred CCCcEEEEEcCCcccc------ccc-----cccc---hH--HHHHHHhhCCEEEEcCHHHHHHHHHhcC-----------
Confidence 3899999999752211 000 0011 11 1345688999999999987776544331
Q ss_pred HhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeC
Q 001705 406 VRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSR 485 (1024)
Q Consensus 406 ~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgR 485 (1024)
...++.+||||+|...|.+... .....++...+++++|+++||
T Consensus 163 ------------~~~~i~vi~n~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~il~~g~ 205 (371)
T cd04962 163 ------------ITKEIEVIPNFVDEDRFRPKPD-------------------------EALKRRLGAPEGEKVLIHISN 205 (371)
T ss_pred ------------CcCCEEEecCCcCHhhcCCCch-------------------------HHHHHhcCCCCCCeEEEEecc
Confidence 1127999999999876644321 011123334567889999999
Q ss_pred CCCCCCHHHHHHHHhhccccCCCCcEE-EEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHH
Q 001705 486 PDPKKNVTTLLKAFGECQPLRELANMT-LILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYR 564 (1024)
Q Consensus 486 ld~~Kgi~~ll~A~~~l~~l~~~~~l~-LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~ 564 (1024)
+.+.||++.+++|+..+.+ . .+.. +++|.+++ ...+.+.+.++++.++|.|+|. .+++..+|+
T Consensus 206 l~~~K~~~~li~a~~~l~~--~-~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~ 269 (371)
T cd04962 206 FRPVKRIDDVIRIFAKVRK--E-VPARLLLVGDGPE-----------RSPAERLARELGLQDDVLFLGK--QDHVEELLS 269 (371)
T ss_pred cccccCHHHHHHHHHHHHh--c-CCceEEEEcCCcC-----------HHHHHHHHHHcCCCceEEEecC--cccHHHHHH
Confidence 9999999999999998853 2 2333 47787764 2445677888898889999997 468999999
Q ss_pred HhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHH
Q 001705 565 LAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRK 644 (1024)
Q Consensus 565 ~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~ 644 (1024)
.| |++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|++++++|+++++++|.+++++++.+.++++
T Consensus 270 ~~----d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~ 345 (371)
T cd04962 270 IA----DLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDDELWQEFSR 345 (371)
T ss_pred hc----CEEEeCCCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHH
Confidence 99 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001705 645 NGLKNI-HRFSWPEHCRNYLSHVEHS 669 (1024)
Q Consensus 645 ~~~~~~-~~fsw~~~a~~~l~~~~~~ 669 (1024)
++++.+ ++|||+.++++|.+.|+++
T Consensus 346 ~~~~~~~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 346 AARNRAAERFDSERIVPQYEALYRRL 371 (371)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 999996 7999999999999999753
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=351.53 Aligned_cols=434 Identities=21% Similarity=0.196 Sum_probs=281.3
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccC-----CC--
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLS-----CP-- 243 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~-----~~-- 243 (1024)
||+|||++.. | ...+||++.++..|+++|+++| |+|.|+++....-.... ........ ..
T Consensus 1 ~Il~v~~E~~--------p-~~k~GGl~~~~~~L~~aL~~~G--~~V~Vi~p~y~~~~~~~--~~~~~~~~~~~~~~~~~ 67 (476)
T cd03791 1 KVLFVASEVA--------P-FAKTGGLGDVVGALPKALAKLG--HDVRVIMPKYGRILDEL--RGQLLVLRLFGVPVGGR 67 (476)
T ss_pred CEEEEEcccc--------c-cccCCcHHHHHHHHHHHHHHCC--CeEEEEecCCcchhhHh--ccCeEEEEEEeeccCCc
Confidence 6999998833 2 3479999999999999999999 99999998754311100 00000000 00
Q ss_pred -----CCCCCCCCeEEEEecCCCCCCcccccc-----CCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC
Q 001705 244 -----SDGTGSCGAYIIRIPCGARDKYIAKES-----LWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYA 313 (1024)
Q Consensus 244 -----~~~~~~~gv~i~rip~~~~~~~~~k~~-----lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~ 313 (1024)
......+|+.+++++.... ..... ..++...+... ..+.......+.+. ..+|||||+|+|
T Consensus 68 ~~~~~~~~~~~~gv~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~f~~~~~~~l~~~-----~~~pDviH~hd~ 138 (476)
T cd03791 68 PEYVGVFELPVDGVPVYFLDNPDY---FDRPGLYDDSGYDYEDNAERF-ALFSRAALELLRRL-----GWKPDIIHCHDW 138 (476)
T ss_pred eeEEEEEEEEeCCceEEEEcChHH---cCCCCCCCccCCCCccHHHHH-HHHHHHHHHHHHhc-----CCCCcEEEECch
Confidence 0002336888888875321 11111 11221111111 11111222222221 257999999999
Q ss_pred ChHHHHHHHHccC------CCCEEEEeCCCchhh---hHHHHhcCCCC--cchhhHHHHHHHHHHHHHhhhcCCEEEeCC
Q 001705 314 DAGEVAAHLSGAL------NVPMVLTGHSLGRNK---FEQLLKQGRLP--KDINASYKIMRRIEAEELGLDASEMVVTST 382 (1024)
Q Consensus 314 ~~~~~a~~l~~~~------~ipiV~t~H~l~~~~---~~~l~~~g~~~--~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S 382 (1024)
+++.++.+++... ++|+|+|+|++.... ...+...+... ......+.....+..++..+..||.|+++|
T Consensus 139 ~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS 218 (476)
T cd03791 139 HTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVS 218 (476)
T ss_pred HHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecC
Confidence 9999988888763 899999999974321 11111111110 000000011122334667889999999999
Q ss_pred HHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCC
Q 001705 383 RQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLP 462 (1024)
Q Consensus 383 ~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p 462 (1024)
+.+.+++...+.++ .++..+. .+..++.+||||+|.+.|.|... ..+...+..+.. ....
T Consensus 219 ~~~~~~i~~~~~~~--gl~~~~~-----------~~~~ki~~I~NGid~~~~~p~~~----~~~~~~~~~~~~---~~~~ 278 (476)
T cd03791 219 PTYAREILTPEFGE--GLDGLLR-----------ARAGKLSGILNGIDYDVWNPATD----PHLPANYSADDL---EGKA 278 (476)
T ss_pred HhHHHHhCCCCCCc--chHHHHH-----------hccCCeEEEeCCCcCcccCcccc----chhhhcCCcccc---ccHH
Confidence 98888764322111 1111111 12248999999999999987642 111100000000 0000
Q ss_pred c-chHHHhhhhC--CCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHH
Q 001705 463 P-MWSEVMRFFT--NPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKL 538 (1024)
Q Consensus 463 ~-~~~~~~~~~~--~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~ 538 (1024)
. ......++.. .++.++|+++||+.+.||++.+++|+..+.+ .. +.+ ++|.++. .+...+.++
T Consensus 279 ~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~--~~lvi~G~g~~---------~~~~~~~~~ 345 (476)
T cd03791 279 ENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLE--LG--GQLVILGSGDP---------EYEEALREL 345 (476)
T ss_pred HHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHH--cC--cEEEEEecCCH---------HHHHHHHHH
Confidence 0 1112233333 3688999999999999999999999999853 22 444 6777642 234556666
Q ss_pred HHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCC------
Q 001705 539 IDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALN------ 612 (1024)
Q Consensus 539 i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~------ 612 (1024)
+.++ .+++.+.+..+.+++..+|+.| |++|+||.+||||++++|||+||+|||+++.||..|++.++.
T Consensus 346 ~~~~--~~~v~~~~~~~~~~~~~~~~~a----Dv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~ 419 (476)
T cd03791 346 AARY--PGRVAVLIGYDEALAHLIYAGA----DFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEG 419 (476)
T ss_pred HHhC--CCcEEEEEeCCHHHHHHHHHhC----CEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCC
Confidence 6665 4577776666667778999999 999999999999999999999999999999999999999887
Q ss_pred cEEEeCCCCHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 001705 613 NGLLVDPHDQNAIADALLKLLA---DKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 613 ~Gllv~p~d~~~la~aI~~ll~---d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~ 667 (1024)
+|++++|.|+++++++|.++++ +++.++++++++++ ..|||+..+++|++.|+
T Consensus 420 ~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 420 TGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLELYR 475 (476)
T ss_pred CeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHh
Confidence 9999999999999999999886 67888888777654 57999999999999986
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-35 Score=340.37 Aligned_cols=387 Identities=19% Similarity=0.199 Sum_probs=264.8
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
|||||+.+ || |+ ..+||++|+++| |+|+++|.... ... . .
T Consensus 1 ~il~~~~~---------~p------~~---~~~la~~L~~~G--~~v~~~~~~~~----------~~~--------~--~ 40 (396)
T cd03818 1 RILFVHQN---------FP------GQ---FRHLAPALAAQG--HEVVFLTEPNA----------APP--------P--G 40 (396)
T ss_pred CEEEECCC---------Cc------hh---HHHHHHHHHHCC--CEEEEEecCCC----------CCC--------C--C
Confidence 58999876 55 33 357999999999 99999998732 000 0 1
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHcc-CCCC
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGA-LNVP 329 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~-~~ip 329 (1024)
|+++++++.++.. ....++|...|...+.... .+.+.+..+... +++||+||+|.... .+..++.. .++|
T Consensus 41 ~v~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~pdvi~~h~~~~--~~~~l~~~~~~~~ 111 (396)
T cd03818 41 GVRVVRYRPPRGP----TSGTHPYLREFEEAVLRGQ-AVARALLALRAK--GFRPDVIVAHPGWG--ETLFLKDVWPDAP 111 (396)
T ss_pred CeeEEEecCCCCC----CCCCCccchhHHHHHHHHH-HHHHHHHHHHhc--CCCCCEEEECCccc--hhhhHHHhCCCCC
Confidence 6899999865542 1147778888776554433 223333333222 36899999996422 22334444 3689
Q ss_pred EEEEeCCCchhhhHHHHhcCCCCcchhhH---HHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHH
Q 001705 330 MVLTGHSLGRNKFEQLLKQGRLPKDINAS---YKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRV 406 (1024)
Q Consensus 330 iV~t~H~l~~~~~~~l~~~g~~~~~i~~~---y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~ 406 (1024)
+|.+.|-+....... .+......... .++..+.......++.||.||+.|+...+.+...+.
T Consensus 112 ~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~------------ 176 (396)
T cd03818 112 LIGYFEFYYRAEGAD---VGFDPEFPPSLDDALRLRNRNALILLALAQADAGVSPTRWQRSTFPAELR------------ 176 (396)
T ss_pred EEEEEeeeecCCCCC---CCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCEEECCCHHHHhhCcHhhc------------
Confidence 998776432221000 00000011111 111111111346789999999999877665322211
Q ss_pred hhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeC-
Q 001705 407 RRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSR- 485 (1024)
Q Consensus 407 ~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgR- 485 (1024)
.++.|||||+|.+.|.+.... ... . .......+++++|+++||
T Consensus 177 -------------~ki~vI~ngvd~~~f~~~~~~--~~~---------------~------~~~~~~~~~~~~i~~vgR~ 220 (396)
T cd03818 177 -------------SRISVIHDGIDTDRLRPDPQA--RLR---------------L------PNGRVLTPGDEVITFVARN 220 (396)
T ss_pred -------------cceEEeCCCccccccCCCchh--hhc---------------c------cccccCCCCCeEEEEECCC
Confidence 289999999999988765410 000 0 000112356789999998
Q ss_pred CCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCC-CcccccccchHHHHHHHHHHH-HcCCCCCEEeCCCCCCCCHHHH
Q 001705 486 PDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRD-DIEDMSNSSSVVLTTVLKLID-KYDLYGQVAYPKHHKQSDVPDI 562 (1024)
Q Consensus 486 ld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~-~~~~l~~~~~~~~~~i~~~i~-~~~l~~~V~~~g~~~~~el~~l 562 (1024)
+.+.||++.+++|+..+.+ ..+++.+ |+|++. .+.........+..++.+... +++ .++|.|+|+++.+++..+
T Consensus 221 l~~~Kg~~~ll~a~~~l~~--~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~V~f~G~v~~~~~~~~ 297 (396)
T cd03818 221 LEPYRGFHVFMRALPRLLR--ARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLD-LSRVHFLGRVPYDQYLAL 297 (396)
T ss_pred cccccCHHHHHHHHHHHHH--HCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccC-cceEEEeCCCCHHHHHHH
Confidence 9999999999999998853 4566665 666532 111111111112333322222 222 468999999999999999
Q ss_pred HHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHH
Q 001705 563 YRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSEC 642 (1024)
Q Consensus 563 y~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~ 642 (1024)
|+.| |++|+||..|+||++++||||||+|||+|+.||..|++.++.+|++++|.|+++++++|.+++++++.++++
T Consensus 298 l~~a----dv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~l 373 (396)
T cd03818 298 LQVS----DVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLDDPARRARL 373 (396)
T ss_pred HHhC----cEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHH
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-hcCCHHHHHHHHHH
Q 001705 643 RKNGLKNI-HRFSWPEHCRNYLS 664 (1024)
Q Consensus 643 ~~~~~~~~-~~fsw~~~a~~~l~ 664 (1024)
++++++.+ ++|||+.++++|++
T Consensus 374 ~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 374 RRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred HHHHHHHHHHhccHHHHHHHHhC
Confidence 99999999 57999999998863
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=329.79 Aligned_cols=367 Identities=20% Similarity=0.221 Sum_probs=264.6
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGS 249 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~ 249 (1024)
-||++|..+ -..||+++++.+|+++|.+.| |++.|++....++ +... ...
T Consensus 2 ~~il~ii~~-------------~~~GG~e~~~~~l~~~l~~~~--~~~~v~~~~~~~~-----~~~~----------~~~ 51 (374)
T TIGR03088 2 PLIVHVVYR-------------FDVGGLENGLVNLINHLPADR--YRHAVVALTEVSA-----FRKR----------IQR 51 (374)
T ss_pred ceEEEEeCC-------------CCCCcHHHHHHHHHhhccccc--cceEEEEcCCCCh-----hHHH----------HHh
Confidence 378888865 236999999999999999998 9998887532111 0111 112
Q ss_pred CCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCC
Q 001705 250 CGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVP 329 (1024)
Q Consensus 250 ~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ip 329 (1024)
.|+.+++++..+.. .+. + ...+.+.+.+ .+|||||+|.... ..+.+++...++|
T Consensus 52 ~~i~~~~~~~~~~~-------~~~----~-------~~~l~~~l~~-------~~~Divh~~~~~~-~~~~~~~~~~~~~ 105 (374)
T TIGR03088 52 PDVAFYALHKQPGK-------DVA----V-------YPQLYRLLRQ-------LRPDIVHTRNLAA-LEAQLPAALAGVP 105 (374)
T ss_pred cCceEEEeCCCCCC-------ChH----H-------HHHHHHHHHH-------hCCCEEEEcchhH-HHHHHHHHhcCCC
Confidence 37888887642210 111 1 1122222222 4799999997633 3344445555777
Q ss_pred E-EEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhh
Q 001705 330 M-VLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRR 408 (1024)
Q Consensus 330 i-V~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~ 408 (1024)
. +++.|+....... .....|... ++.....+|.++++|+...+.+...+.
T Consensus 106 ~~i~~~h~~~~~~~~----------~~~~~~~~~-----~~~~~~~~~~~i~vs~~~~~~~~~~~~-------------- 156 (374)
T TIGR03088 106 ARIHGEHGRDVFDLD----------GSNWKYRWL-----RRLYRPLIHHYVAVSRDLEDWLRGPVK-------------- 156 (374)
T ss_pred eEEEeecCcccccch----------hhHHHHHHH-----HHHHHhcCCeEEEeCHHHHHHHHHhcC--------------
Confidence 5 5566643111000 001112222 233456789999999887776433321
Q ss_pred hcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCC
Q 001705 409 QRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDP 488 (1024)
Q Consensus 409 ~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~ 488 (1024)
.+..++.+||||+|.+.|.+... . . ...........++++|+++||+.+
T Consensus 157 --------~~~~~~~vi~ngvd~~~~~~~~~-~--------------------~--~~~~~~~~~~~~~~~i~~vGrl~~ 205 (374)
T TIGR03088 157 --------VPPAKIHQIYNGVDTERFHPSRG-D--------------------R--SPILPPDFFADESVVVGTVGRLQA 205 (374)
T ss_pred --------CChhhEEEeccCccccccCCCcc-c--------------------h--hhhhHhhcCCCCCeEEEEEecCCc
Confidence 12238999999999988865431 0 0 001111222356789999999999
Q ss_pred CCCHHHHHHHHhhccccCC--CCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHH
Q 001705 489 KKNVTTLLKAFGECQPLRE--LANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRL 565 (1024)
Q Consensus 489 ~Kgi~~ll~A~~~l~~l~~--~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~ 565 (1024)
.||++.+++|+.++.+... .+++.| ++|+++. ...+.+.++.+++...+.|+|+ .+|+..+|+.
T Consensus 206 ~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ 272 (374)
T TIGR03088 206 VKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGPA-----------RGACEQMVRAAGLAHLVWLPGE--RDDVPALMQA 272 (374)
T ss_pred ccCHHHHHHHHHHHHHhCcccccceEEEEecCCch-----------HHHHHHHHHHcCCcceEEEcCC--cCCHHHHHHh
Confidence 9999999999998853222 235666 7787753 3556788888999999999996 6899999999
Q ss_pred hhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001705 566 AAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKN 645 (1024)
Q Consensus 566 A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~ 645 (1024)
| |++|+||..||||++++||||||+|||+|+.||..|++.++.+|++++++|+++++++|.+++++++.+++++++
T Consensus 273 a----di~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~ 348 (374)
T TIGR03088 273 L----DLFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSDPAARRAHGAA 348 (374)
T ss_pred c----CEEEeccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 9 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH-hcCCHHHHHHHHHHHHHHh
Q 001705 646 GLKNI-HRFSWPEHCRNYLSHVEHS 669 (1024)
Q Consensus 646 ~~~~~-~~fsw~~~a~~~l~~~~~~ 669 (1024)
+++.+ ++|||+.++++|.++|.++
T Consensus 349 a~~~~~~~fs~~~~~~~~~~~y~~~ 373 (374)
T TIGR03088 349 GRARAEQQFSINAMVAAYAGLYDQL 373 (374)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 99998 7999999999999999875
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-34 Score=329.85 Aligned_cols=370 Identities=16% Similarity=0.210 Sum_probs=263.7
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGS 249 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~ 249 (1024)
-||+|+++.-+ ..| +...||++++++++++.|+ ++|+++|..... | ...+ ...
T Consensus 3 ~~~~~~~~~~~------~~p-~~~~g~ve~~~~~~~~~l~-----~~~~~~~~~~~~------~-~~~~--------~~~ 55 (380)
T PRK15484 3 DKIIFTVTPIF------SIP-PRGAAAVETWIYQVAKRTS-----IPNRIACIKNPG------Y-PEYT--------KVN 55 (380)
T ss_pred ceEEEEeccCC------CCC-CccccHHHHHHHHhhhhcc-----CCeeEEEecCCC------C-Cchh--------hcc
Confidence 38999987754 233 3368999999999999993 589999987431 1 1111 123
Q ss_pred CCeEEEEecCCCCCCccccccCCcch--HHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCC
Q 001705 250 CGAYIIRIPCGARDKYIAKESLWPYI--HEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALN 327 (1024)
Q Consensus 250 ~gv~i~rip~~~~~~~~~k~~lwp~~--~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ 327 (1024)
+|+.++++++... |..-...|-.+ -.|...++.... . ....++||||+|... .....+..+..+
T Consensus 56 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-------~----~~~~~~~vi~v~~~~-~~~~~~~~~~~~ 121 (380)
T PRK15484 56 DNCDIHYIGFSRI--YKRLFQKWTRLDPLPYSQRILNIAH-------K----FTITKDSVIVIHNSM-KLYRQIRERAPQ 121 (380)
T ss_pred CCCceEEEEeccc--cchhhhhhhccCchhHHHHHHHHHH-------h----cCCCCCcEEEEeCcH-HhHHHHHhhCCC
Confidence 4677777765221 11100111111 011111211111 1 011468999999853 333334444567
Q ss_pred CCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHh
Q 001705 328 VPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVR 407 (1024)
Q Consensus 328 ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~ 407 (1024)
+|+|++.|+.+. ...+..++.|+++|+...+.+...++
T Consensus 122 ~~~v~~~h~~~~-----------------------------~~~~~~~~~ii~~S~~~~~~~~~~~~------------- 159 (380)
T PRK15484 122 AKLVMHMHNAFE-----------------------------PELLDKNAKIIVPSQFLKKFYEERLP------------- 159 (380)
T ss_pred CCEEEEEecccC-----------------------------hhHhccCCEEEEcCHHHHHHHHhhCC-------------
Confidence 899999996411 11245678999999876665433221
Q ss_pred hhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCC
Q 001705 408 RQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPD 487 (1024)
Q Consensus 408 ~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld 487 (1024)
..++.+||||+|.+.|.+... .....++...+++++|+++||+.
T Consensus 160 -----------~~~i~vIpngvd~~~~~~~~~-------------------------~~~~~~~~~~~~~~~il~~Grl~ 203 (380)
T PRK15484 160 -----------NADISIVPNGFCLETYQSNPQ-------------------------PNLRQQLNISPDETVLLYAGRIS 203 (380)
T ss_pred -----------CCCEEEecCCCCHHHcCCcch-------------------------HHHHHHhCCCCCCeEEEEeccCc
Confidence 127899999999887754321 01112233345678999999999
Q ss_pred CCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHh
Q 001705 488 PKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLA 566 (1024)
Q Consensus 488 ~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A 566 (1024)
+.||++.+++|+..+. ...|++.| |+|+++.... .+...+..++.+++..++ .+|.|.|+++.+++..+|+.|
T Consensus 204 ~~Kg~~~Li~A~~~l~--~~~p~~~lvivG~g~~~~~--~~~~~~~~~l~~~~~~l~--~~v~~~G~~~~~~l~~~~~~a 277 (380)
T PRK15484 204 PDKGILLLMQAFEKLA--TAHSNLKLVVVGDPTASSK--GEKAAYQKKVLEAAKRIG--DRCIMLGGQPPEKMHNYYPLA 277 (380)
T ss_pred cccCHHHHHHHHHHHH--HhCCCeEEEEEeCCccccc--cchhHHHHHHHHHHHhcC--CcEEEeCCCCHHHHHHHHHhC
Confidence 9999999999999985 44577776 6787653211 123456677777777766 579999999999999999999
Q ss_pred hcCCcEEEecCCC-CCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEE-EeCCCCHHHHHHHHHHHHhCHHHHHHHHH
Q 001705 567 AKTKGVFINPALV-EPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGL-LVDPHDQNAIADALLKLLADKNMWSECRK 644 (1024)
Q Consensus 567 ~~~~dv~v~ps~~-Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gl-lv~p~d~~~la~aI~~ll~d~~~~~~~~~ 644 (1024)
|++|+||.+ |+||++++||||||+|||+|+.||..|++.++.+|+ +++|.|+++++++|.++++|++. .++++
T Consensus 278 ----Dv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~~-~~~~~ 352 (380)
T PRK15484 278 ----DLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPEL-TQIAE 352 (380)
T ss_pred ----CEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHHH-HHHHH
Confidence 999999975 999999999999999999999999999999999998 66899999999999999999985 77999
Q ss_pred HHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001705 645 NGLKNI-HRFSWPEHCRNYLSHVEHS 669 (1024)
Q Consensus 645 ~~~~~~-~~fsw~~~a~~~l~~~~~~ 669 (1024)
++++.+ ++|||+.++++|++.|.+.
T Consensus 353 ~ar~~~~~~fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 353 QAKDFVFSKYSWEGVTQRFEEQIHNW 378 (380)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 999987 7999999999999999754
|
|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-34 Score=330.48 Aligned_cols=386 Identities=19% Similarity=0.225 Sum_probs=265.2
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGS 249 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~ 249 (1024)
|||+++.+. + ..||.++++.+||++|+++| |+|+|+|..... . ..+ + +..
T Consensus 1 mkIl~~~~~---------~----~~gG~e~~~~~la~~L~~~G--~~V~v~~~~~~~-~--~~~----~--------~~~ 50 (392)
T cd03805 1 LRVAFIHPD---------L----GIGGAERLVVDAALALQSRG--HEVTIYTSHHDP-S--HCF----E--------ETK 50 (392)
T ss_pred CeEEEECCC---------C----CCchHHHHHHHHHHHHHhCC--CeEEEEcCCCCc-h--hcc----h--------hcc
Confidence 899999855 2 36999999999999999999 999999975211 0 000 0 111
Q ss_pred C-CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCC
Q 001705 250 C-GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNV 328 (1024)
Q Consensus 250 ~-gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~i 328 (1024)
. ++.+..++. ++++ .++..+..+... ...+...+...+.. ..+||+||+|....+.... ....+.
T Consensus 51 ~~~~~i~~~~~-----~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~--~~~~Dvi~~~~~~~~~~~~--~~~~~~ 116 (392)
T cd03805 51 DGTLPVRVRGD-----WLPR-SIFGRFHILCAY----LRMLYLALYLLLLP--DEKYDVFIVDQVSACVPLL--KLFSPS 116 (392)
T ss_pred CCeeEEEEEeE-----EEcc-hhhHhHHHHHHH----HHHHHHHHHHHhcc--cCCCCEEEEcCcchHHHHH--HHhcCC
Confidence 2 244444331 1111 111111111111 11111111100111 1479999999765443322 222248
Q ss_pred CEEEEeCCCchhhhHHHHhcCCCCcchhhHHH-HHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHh
Q 001705 329 PMVLTGHSLGRNKFEQLLKQGRLPKDINASYK-IMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVR 407 (1024)
Q Consensus 329 piV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~-~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~ 407 (1024)
|++++.|.. +.. ... . .......|+ +++. .|+..++.||.|+++|+...+.+...++....
T Consensus 117 ~~i~~~h~~--~~~---~~~-~-~~~~~~~~~~~~~~--~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~--------- 178 (392)
T cd03805 117 KILFYCHFP--DQL---LAQ-R-GSLLKRLYRKPFDW--LEEFTTGMADKIVVNSNFTASVFKKTFPSLAK--------- 178 (392)
T ss_pred cEEEEEecC--hHH---hcC-C-CcHHHHHHHHHHHH--HHHHHhhCceEEEEcChhHHHHHHHHhccccc---------
Confidence 999999942 211 111 0 001111221 2222 37788999999999998777665444332111
Q ss_pred hhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCC
Q 001705 408 RQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPD 487 (1024)
Q Consensus 408 ~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld 487 (1024)
.++.|||||+|.+.|.+... . . ........++.++|+++||+.
T Consensus 179 ------------~~~~vi~n~vd~~~~~~~~~-~--~----------------------~~~~~~~~~~~~~i~~~grl~ 221 (392)
T cd03805 179 ------------NPREVVYPCVDTDSFESTSE-D--P----------------------DPGLLIPKSGKKTFLSINRFE 221 (392)
T ss_pred ------------CCcceeCCCcCHHHcCcccc-c--c----------------------cccccccCCCceEEEEEeeec
Confidence 13469999999988765431 0 0 001112246678999999999
Q ss_pred CCCCHHHHHHHHhhccccC-CCCcEEE-EEecCCCcccccccchHHHHHHHHHHHH-cCCCCCEEeCCCCCCCCHHHHHH
Q 001705 488 PKKNVTTLLKAFGECQPLR-ELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDK-YDLYGQVAYPKHHKQSDVPDIYR 564 (1024)
Q Consensus 488 ~~Kgi~~ll~A~~~l~~l~-~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~-~~l~~~V~~~g~~~~~el~~ly~ 564 (1024)
+.||++.+++|+.++.+.. ..+++.| ++|+++.. .....++..++.+++++ +++.++|.|+|+++.+++..+|+
T Consensus 222 ~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~---~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~~~~~~l~ 298 (392)
T cd03805 222 RKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPR---VAENVEYLEELQRLAEELLLLEDQVIFLPSISDSQKELLLS 298 (392)
T ss_pred ccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCC---CchhHHHHHHHHHHHHHhcCCCceEEEeCCCChHHHHHHHh
Confidence 9999999999999985321 0156666 67776531 12334667888999999 99999999999999999999999
Q ss_pred HhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHH
Q 001705 565 LAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRK 644 (1024)
Q Consensus 565 ~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~ 644 (1024)
.| |++++||..|+||++++||||||+|||+|+.||..|++.++.+|+++++ |+++++++|.+++++++.++++++
T Consensus 299 ~a----d~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~~~~~~~~~ 373 (392)
T cd03805 299 SA----RALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDPDLADRMGA 373 (392)
T ss_pred hC----eEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhChHHHHHHHH
Confidence 99 9999999999999999999999999999999999999999899999976 999999999999999999999999
Q ss_pred HHHHHH-hcCCHHHHHHHH
Q 001705 645 NGLKNI-HRFSWPEHCRNY 662 (1024)
Q Consensus 645 ~~~~~~-~~fsw~~~a~~~ 662 (1024)
++++.+ ++|||+.+++++
T Consensus 374 ~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 374 AGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred HHHHHHHHhcCHHHHhhhC
Confidence 999998 799999998764
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=340.66 Aligned_cols=358 Identities=15% Similarity=0.144 Sum_probs=281.3
Q ss_pred CeEEEEecCCCC-----CCccccccCCcchHHHHH----------HHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCh
Q 001705 251 GAYIIRIPCGAR-----DKYIAKESLWPYIHEFVD----------GALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADA 315 (1024)
Q Consensus 251 gv~i~rip~~~~-----~~~~~k~~lwp~~~~f~~----------~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~ 315 (1024)
+..+..++..+. ..+++|..|||.+|++.+ .....++.|++++.+.+.++ |+||+|++++
T Consensus 69 ~~~~~~v~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~-----d~vWVhDYhL 143 (487)
T TIGR02398 69 KLTAARIPLSKEQVDIFYHITSKEAFWPILHTFPERFQFREDDWQVFLKVNRAFAEAACLEAAEG-----ATVWVHDYNL 143 (487)
T ss_pred ceeEEEEeCCHHHHHHHHhhhhhccccccccCCccccCcCHHHHHHHHHHHHHHHHHHHHhcCCC-----CEEEEecchh
Confidence 466677766443 356899999999986544 23344577888888877765 9999999999
Q ss_pred HHHHHHHHccC-CCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhh---cCCEEEeCCHHHHHHHHh
Q 001705 316 GEVAAHLSGAL-NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLD---ASEMVVTSTRQEIEMQWG 391 (1024)
Q Consensus 316 ~~~a~~l~~~~-~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~---~Ad~Vi~~S~~~~~~~~~ 391 (1024)
.+++.++++.. +.++.|++| .+++.+.+++.+++.+.+++ .||+|.++|..++++
T Consensus 144 ~llp~~LR~~~~~~~IgfFlH------------------iPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~--- 202 (487)
T TIGR02398 144 WLVPGYIRQLRPDLKIAFFHH------------------TPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVEN--- 202 (487)
T ss_pred hHHHHHHHHhCCCCeEEEEee------------------CCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHH---
Confidence 99999999765 689999999 77888889999998877776 999999999999998
Q ss_pred cccCcchHHHHHHHHhhhcC----------------------ccccCCCCCcEEEeCCCCCCCCccccCCCCCCcccccc
Q 001705 392 LYDGFDLKLERKLRVRRQRG----------------------VSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSL 449 (1024)
Q Consensus 392 ~~~~f~~~~~r~l~~~~~~g----------------------~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~ 449 (1024)
|...+.++|+.....+ +...| +..++.++|+|||++.|.+...
T Consensus 203 ----Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~g-r~v~v~~~PiGID~~~f~~~~~---------- 267 (487)
T TIGR02398 203 ----FVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGN-RVVKLGAHPVGTDPERIRSALA---------- 267 (487)
T ss_pred ----HHHHHHHHhCCccccccccccccccccccccccccccceeECC-EEEEEEEEECEecHHHHHHHhc----------
Confidence 7778888887655332 33334 3448999999999999865431
Q ss_pred ccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCc----EEE-EEecC-----C
Q 001705 450 IGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELAN----MTL-ILGNR-----D 519 (1024)
Q Consensus 450 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~L-IvG~~-----~ 519 (1024)
........+.+++.+ .++++|+++||+|+.||+..+++||+++ +..+|. ++| ++|.. +
T Consensus 268 --------~~~~~~~~~~lr~~~--~~~kiIl~VDRLDy~KGI~~kl~Afe~~--L~~~Pe~~gkv~Lvqi~~psr~~v~ 335 (487)
T TIGR02398 268 --------AASIREMMERIRSEL--AGVKLILSAERVDYTKGILEKLNAYERL--LERRPELLGKVTLVTACVPAASGMT 335 (487)
T ss_pred --------CchHHHHHHHHHHHc--CCceEEEEecccccccCHHHHHHHHHHH--HHhCccccCceEEEEEeCCCcccch
Confidence 000111112222222 3789999999999999999999999999 456664 455 34332 4
Q ss_pred CcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCC----c
Q 001705 520 DIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGL----P 595 (1024)
Q Consensus 520 ~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~----P 595 (1024)
.|+++..+..+..++|++...+.++.+.++|.+.++.+++.++|+.| ||+++||++||||||++||+||+. |
T Consensus 336 ~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~A----DV~lvT~lrDGmNLVa~Eyva~~~~~~Gv 411 (487)
T TIGR02398 336 IYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMA----DVMWITPLRDGLNLVAKEYVAAQGLLDGV 411 (487)
T ss_pred HHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhC----CEEEECccccccCcchhhHHhhhcCCCCC
Confidence 56667777777788888888888999999999999999999999999 999999999999999999999977 8
Q ss_pred EEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHH-HHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 001705 596 VVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMW-SECRKNGLKNIHRFSWPEHCRNYLSHVEH 668 (1024)
Q Consensus 596 VVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~-~~~~~~~~~~~~~fsw~~~a~~~l~~~~~ 668 (1024)
+|.|..+|..+.+ ..+++|||+|++++|++|.++|++|... ++..+..++.+..++...|++.|+..+..
T Consensus 412 LILSefaGaa~~l---~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 412 LVLSEFAGAAVEL---KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred EEEeccccchhhc---CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhhh
Confidence 8888877776554 4699999999999999999999987644 44445555566899999999999987753
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-33 Score=337.82 Aligned_cols=391 Identities=16% Similarity=0.126 Sum_probs=262.5
Q ss_pred CCCce-EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCce------------EEEEEecCCCCCCCCcc
Q 001705 166 SSRNL-YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVY------------RVDLLTRQIASPEVDSS 232 (1024)
Q Consensus 166 ~~~~m-kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~------------~V~vlt~~~~~p~~~~~ 232 (1024)
+.+.. ||++|... + ..||+++++.+|+.+|.+++ + .+.|++...........
T Consensus 277 ~~~~~~rIl~vi~s---------l----~~GGAEr~~~~La~~l~~~~--~~~~~~~g~g~~~~~~V~~~~~~~~~g~~~ 341 (694)
T PRK15179 277 PESFVGPVLMINGS---------L----GAGGAERQFVNTAVALQSAI--QQGQSIAGYGVLGPVQVVCRSLRSREGADF 341 (694)
T ss_pred CCCCcceEEEEeCC---------C----CCCcHHHHHHHHHHHHHhcc--cCcccccCccCCCCcEEEEEecccccCcch
Confidence 45566 99999855 2 36899999999999999984 2 23444321110000000
Q ss_pred cCCCccccCCCCCCCCCCCeEEEEecCCCCCCccccccC-CcchHH----HHHHHHHHHHHHHHHHHhhhcCCCCCcceE
Q 001705 233 YGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESL-WPYIHE----FVDGALNHIVNMARAIGEQVNGGKPTWPYV 307 (1024)
Q Consensus 233 y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~l-wp~~~~----f~~~~l~~~~~~~~~l~~~~~~g~~~~pDv 307 (1024)
+.. .+ ...|+.++.++..+. .+...... ...+.. ...........+.+.+.+ .+|||
T Consensus 342 ~~~---~L-------~~~Gv~v~~l~~~~~-~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~-------~kpDI 403 (694)
T PRK15179 342 FAA---TL-------ADAGIPVSVYSDMQA-WGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRS-------SVPSV 403 (694)
T ss_pred HHH---HH-------HhCCCeEEEeccCCc-cCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHH-------cCCcE
Confidence 000 11 124788887765432 11111100 011110 111222333344444444 57999
Q ss_pred EEEcCCChHHHHHHHHccCCCCEEE-EeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHH
Q 001705 308 IHGHYADAGEVAAHLSGALNVPMVL-TGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEI 386 (1024)
Q Consensus 308 Ih~h~~~~~~~a~~l~~~~~ipiV~-t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~ 386 (1024)
||+|......++.++++..++|+|+ +.|++....... .....|. .+ ........++.+++.|....
T Consensus 404 VH~h~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~~~---------~~~~~~~---~l-~~~l~~~~~~i~Vs~S~~~~ 470 (694)
T PRK15179 404 VHIWQDGSIFACALAALLAGVPRIVLSVRTMPPVDRPD---------RYRVEYD---II-YSELLKMRGVALSSNSQFAA 470 (694)
T ss_pred EEEeCCcHHHHHHHHHHHcCCCEEEEEeCCCccccchh---------HHHHHHH---HH-HHHHHhcCCeEEEeCcHHHH
Confidence 9999988888888888778999876 557542211100 0000111 11 11111224556677776655
Q ss_pred HHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchH
Q 001705 387 EMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWS 466 (1024)
Q Consensus 387 ~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 466 (1024)
+.+...+ |.+..++.|||||||...|.+... ...
T Consensus 471 ~~l~~~~----------------------g~~~~kI~VI~NGVd~~~f~~~~~------------------------~~~ 504 (694)
T PRK15179 471 HRYADWL----------------------GVDERRIPVVYNGLAPLKSVQDDA------------------------CTA 504 (694)
T ss_pred HHHHHHc----------------------CCChhHEEEECCCcCHHhcCCCch------------------------hhH
Confidence 5432222 122238999999999887754221 000
Q ss_pred HHhhh--hCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcC
Q 001705 467 EVMRF--FTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYD 543 (1024)
Q Consensus 467 ~~~~~--~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~ 543 (1024)
....+ ....+.++|+++||+.+.||++.+++|+..+. ...+++.| |+|+++. ...+.+++++++
T Consensus 505 ~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~--~~~p~~~LvIvG~G~~-----------~~~L~~l~~~lg 571 (694)
T PRK15179 505 MMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFA--ASHPKVRFIMVGGGPL-----------LESVREFAQRLG 571 (694)
T ss_pred HHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHH--HHCcCeEEEEEccCcc-----------hHHHHHHHHHcC
Confidence 00011 11245678999999999999999999999885 34567776 7888763 356778999999
Q ss_pred CCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCH-
Q 001705 544 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQ- 622 (1024)
Q Consensus 544 l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~- 622 (1024)
+.++|.|+|+. ++++.+|+.| |+||+||.+|+||++++||||||+|||+|+.||+.|+|.++.+|++|+|+|.
T Consensus 572 L~~~V~flG~~--~dv~~ll~aa----Dv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~ 645 (694)
T PRK15179 572 MGERILFTGLS--RRVGYWLTQF----NAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVT 645 (694)
T ss_pred CCCcEEEcCCc--chHHHHHHhc----CEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCC
Confidence 99999999995 5899999999 9999999999999999999999999999999999999999999999998874
Q ss_pred -HHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 001705 623 -NAIADALLKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 623 -~~la~aI~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~ 667 (1024)
++++++|.+++.+......+++++++.+ ++|||+.++++|+++|+
T Consensus 646 ~~~La~aL~~ll~~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 646 APDVAEALARIHDMCAADPGIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred hHHHHHHHHHHHhChhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 6899999998887666677888999998 69999999999999984
|
|
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-35 Score=346.22 Aligned_cols=354 Identities=17% Similarity=0.157 Sum_probs=259.7
Q ss_pred CCeEEEEecCCCC-----CCccccccCCcchHHHH----------HHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC
Q 001705 250 CGAYIIRIPCGAR-----DKYIAKESLWPYIHEFV----------DGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYAD 314 (1024)
Q Consensus 250 ~gv~i~rip~~~~-----~~~~~k~~lwp~~~~f~----------~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~ 314 (1024)
.+..++.++..+. ..++++..|||.+|++. ......++.+++.+.+.++++ |+||+|+++
T Consensus 67 ~~~~~~~v~l~~~~~~~~y~~f~~~~LWp~~H~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~-----d~iwihDyh 141 (460)
T cd03788 67 GEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHYRLDLARFDREDWEAYVRVNRKFADAIAEVLRPG-----DLVWVHDYH 141 (460)
T ss_pred CCceEEEeeCCHHHHHHHHHHhhhhhcchhhcCCCCccccCHHHHHHHHHHHHHHHHHHHHhcCCC-----CEEEEeChh
Confidence 4667777765433 24678999999998755 334445577888888877654 999999999
Q ss_pred hHHHHHHHHccC-CCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHh---hhcCCEEEeCCHHHHHHHH
Q 001705 315 AGEVAAHLSGAL-NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELG---LDASEMVVTSTRQEIEMQW 390 (1024)
Q Consensus 315 ~~~~a~~l~~~~-~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~---l~~Ad~Vi~~S~~~~~~~~ 390 (1024)
...++.++++.. +.|++|+.| .+++.+.+++.+++.+.+ +-.+|+|+++|..+++.
T Consensus 142 l~llp~~lr~~~~~~~i~~f~H------------------ipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~-- 201 (460)
T cd03788 142 LLLLPQMLRERGPDARIGFFLH------------------IPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARN-- 201 (460)
T ss_pred hhHHHHHHHhhCCCCeEEEEEe------------------CCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHH--
Confidence 999999998765 689999999 444555556655544333 34799999999988877
Q ss_pred hcccCcchHHHHHHHHhhh--cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHH
Q 001705 391 GLYDGFDLKLERKLRVRRQ--RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEV 468 (1024)
Q Consensus 391 ~~~~~f~~~~~r~l~~~~~--~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 468 (1024)
|...+.++++.... .++...| +..++.+||||||++.|.+... .+.....+
T Consensus 202 -----Fl~~~~~~l~~~~~~~~~i~~~g-~~~~i~vip~GID~~~f~~~~~---------------------~~~~~~~~ 254 (460)
T cd03788 202 -----FLSCCSRLLGLEVTDDGGVEYGG-RRVRVGAFPIGIDPDAFRKLAA---------------------SPEVQERA 254 (460)
T ss_pred -----HHHHHHHHcCCcccCCceEEECC-EEEEEEEEeCeEcHHHHHHHhc---------------------CchhHHHH
Confidence 45555566554433 3333333 3348999999999998865531 11111111
Q ss_pred hh-hhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCc----EEE-EEecCCCcccccccchHHHHHHHHHHHHc
Q 001705 469 MR-FFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELAN----MTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKY 542 (1024)
Q Consensus 469 ~~-~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~ 542 (1024)
.+ ....+++++|+++||+++.||++.+++||+.+. ...|+ ++| ++|....-+. ....++..++.++++++
T Consensus 255 ~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll--~~~p~~~~~v~Lv~vg~~~~g~~--~~~~~l~~~l~~~v~~i 330 (460)
T cd03788 255 AELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLL--ERYPEWRGKVVLVQIAVPSRTDV--PEYQELRREVEELVGRI 330 (460)
T ss_pred HHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHH--HhChhhcCCEEEEEEccCCCcCc--HHHHHHHHHHHHHHHHH
Confidence 11 122467899999999999999999999999885 34443 444 4543211000 01123445555555443
Q ss_pred C-------CCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCc----EEEcCCCCchhhhccC
Q 001705 543 D-------LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLP----VVATKNGGPVDILKAL 611 (1024)
Q Consensus 543 ~-------l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~P----VVat~~Gg~~eii~~~ 611 (1024)
+ +.+.+.+.|.++.+++.++|+.| |+||+||..||||++++||||||+| ||+|+.+|..+. +
T Consensus 331 n~~~g~~~~~~v~~~~g~v~~~el~~~y~~a----Dv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~ 403 (460)
T cd03788 331 NGKFGTLDWTPVRYLYRSLPREELAALYRAA----DVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---L 403 (460)
T ss_pred HhccCCCCceeEEEEeCCCCHHHHHHHHHhc----cEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh---c
Confidence 2 44556677899999999999999 9999999999999999999999999 999988887776 4
Q ss_pred CcEEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 001705 612 NNGLLVDPHDQNAIADALLKLLADK-NMWSECRKNGLKNIHRFSWPEHCRNYLSHV 666 (1024)
Q Consensus 612 ~~Gllv~p~d~~~la~aI~~ll~d~-~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~ 666 (1024)
.+|++|+|+|++++|++|.++++++ ++++.+++++++.+.+|||..|+++|++.+
T Consensus 404 ~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 404 SGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 6899999999999999999999965 677788888888889999999999998765
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=314.36 Aligned_cols=359 Identities=20% Similarity=0.253 Sum_probs=255.9
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++|+.+++ ++..||+++++.+|+++|.++| |+|+|+|.....+. . . ...+
T Consensus 1 ~i~~i~~~~~----------~~~~gG~~~~~~~la~~L~~~g--~~v~v~~~~~~~~~-------~-~--------~~~~ 52 (363)
T cd04955 1 KIAIIGTRGI----------PAKYGGFETFVEELAPRLVARG--HEVTVYCRSPYPKQ-------K-E--------TEYN 52 (363)
T ss_pred CeEEEecCcC----------CcccCcHHHHHHHHHHHHHhcC--CCEEEEEccCCCCC-------c-c--------cccC
Confidence 6899988876 5789999999999999999999 99999998643211 0 1 2235
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCE
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPM 330 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipi 330 (1024)
|++++++|.... .. +..+. .....+...+.. ..++|+||...+....++. +.+..++|+
T Consensus 53 ~i~~~~~~~~~~-~~---------~~~~~----~~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~~-~~~~~~~~~ 111 (363)
T cd04955 53 GVRLIHIPAPEI-GG---------LGTII----YDILAILHALFV------KRDIDHVHALGPAIAPFLP-LLRLKGKKV 111 (363)
T ss_pred CceEEEcCCCCc-cc---------hhhhH----HHHHHHHHHHhc------cCCeEEEEecCccHHHHHH-HHHhcCCCE
Confidence 889998885321 00 01111 111111111111 1356777766554433333 344458999
Q ss_pred EEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhc
Q 001705 331 VLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQR 410 (1024)
Q Consensus 331 V~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~ 410 (1024)
+++.|++..... .+. . ....+.+. .++..++.||.|++.|+...+.+...|+.
T Consensus 112 v~~~h~~~~~~~-------~~~-~--~~~~~~~~--~~~~~~~~ad~ii~~s~~~~~~~~~~~~~--------------- 164 (363)
T cd04955 112 VVNMDGLEWKRA-------KWG-R--PAKRYLKF--GEKLAVKFADRLIADSPGIKEYLKEKYGR--------------- 164 (363)
T ss_pred EEEccCcceeec-------ccc-c--chhHHHHH--HHHHHHhhccEEEeCCHHHHHHHHHhcCC---------------
Confidence 999998633210 000 0 11112222 25667889999999998877765443322
Q ss_pred CccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCC
Q 001705 411 GVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKK 490 (1024)
Q Consensus 411 g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~K 490 (1024)
+..+||||+|...+.+... ....+. .++++.|+++||+.+.|
T Consensus 165 ----------~~~~i~ngv~~~~~~~~~~---------------------------~~~~~~-~~~~~~i~~~G~~~~~K 206 (363)
T cd04955 165 ----------DSTYIPYGADHVVSSEEDE---------------------------ILKKYG-LEPGRYYLLVGRIVPEN 206 (363)
T ss_pred ----------CCeeeCCCcChhhcchhhh---------------------------hHHhcC-CCCCcEEEEEecccccC
Confidence 3389999999876543110 001111 13356789999999999
Q ss_pred CHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHH-HcCCCCCEEeCCCCCCCCHHHHHHHhhc
Q 001705 491 NVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLID-KYDLYGQVAYPKHHKQSDVPDIYRLAAK 568 (1024)
Q Consensus 491 gi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~-~~~l~~~V~~~g~~~~~el~~ly~~A~~ 568 (1024)
|++.+++|+.++.. ++.| ++|+++.... +.+.+. .++..++|.|+|+++.+++..+|..|
T Consensus 207 g~~~li~a~~~l~~-----~~~l~ivG~~~~~~~-----------~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~a-- 268 (363)
T cd04955 207 NIDDLIEAFSKSNS-----GKKLVIVGNADHNTP-----------YGKLLKEKAAADPRIIFVGPIYDQELLELLRYA-- 268 (363)
T ss_pred CHHHHHHHHHhhcc-----CceEEEEcCCCCcch-----------HHHHHHHHhCCCCcEEEccccChHHHHHHHHhC--
Confidence 99999999998842 3444 7888754222 222222 56778899999999999999999999
Q ss_pred CCcEEEecCCC-CCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 001705 569 TKGVFINPALV-EPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGL 647 (1024)
Q Consensus 569 ~~dv~v~ps~~-Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~ 647 (1024)
|++++||.. |+||++++||||||+|||+|+.|+..|++.+ +|+++++.|. ++++|.+++++++.+.+++.+++
T Consensus 269 --d~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~l~~~~~~~~~~~~~~~ 342 (363)
T cd04955 269 --ALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLEELEADPEEVSAMAKAAR 342 (363)
T ss_pred --CEEEeCCccCCCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHHHHHhCHHHHHHHHHHHH
Confidence 999999998 9999999999999999999999999999875 7999988776 99999999999999999999999
Q ss_pred HHH-hcCCHHHHHHHHHHHHH
Q 001705 648 KNI-HRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 648 ~~~-~~fsw~~~a~~~l~~~~ 667 (1024)
+.+ ++|||+.++++|++.|+
T Consensus 343 ~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 343 ERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred HHHHHhCCHHHHHHHHHHHhC
Confidence 998 58999999999999873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=317.05 Aligned_cols=278 Identities=27% Similarity=0.407 Sum_probs=225.1
Q ss_pred CcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCC
Q 001705 303 TWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTST 382 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S 382 (1024)
.+||+||+|+...+..+..+++.+++|+|++.|+.......... ....+...+. .+..+++.+|.|++.|
T Consensus 81 ~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~--------~~~~~~~~~~--~~~~~~~~~d~ii~~s 150 (367)
T cd05844 81 HRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLALL--------LRSRWALYAR--RRRRLARRAALFIAVS 150 (367)
T ss_pred hCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccchhh--------cccchhHHHH--HHHHHHHhcCEEEECC
Confidence 57999999988777778888888999999999975322111000 0000112222 2556788999999999
Q ss_pred HHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCC
Q 001705 383 RQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLP 462 (1024)
Q Consensus 383 ~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p 462 (1024)
+...+.+... ++. ..++.++|||+|.+.|.+...
T Consensus 151 ~~~~~~~~~~--~~~---------------------~~~i~vi~~g~d~~~~~~~~~----------------------- 184 (367)
T cd05844 151 QFIRDRLLAL--GFP---------------------PEKVHVHPIGVDTAKFTPATP----------------------- 184 (367)
T ss_pred HHHHHHHHHc--CCC---------------------HHHeEEecCCCCHHhcCCCCC-----------------------
Confidence 8777664332 111 238999999999887754321
Q ss_pred cchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHH
Q 001705 463 PMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDK 541 (1024)
Q Consensus 463 ~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~ 541 (1024)
..+.+.|+++|++.+.||++.+++|+..+.+ ..+++.| ++|+++. .+++..++++
T Consensus 185 -----------~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~--~~~~~~l~ivG~g~~-----------~~~~~~~~~~ 240 (367)
T cd05844 185 -----------ARRPPRILFVGRFVEKKGPLLLLEAFARLAR--RVPEVRLVIIGDGPL-----------LAALEALARA 240 (367)
T ss_pred -----------CCCCcEEEEEEeeccccChHHHHHHHHHHHH--hCCCeEEEEEeCchH-----------HHHHHHHHHH
Confidence 1346789999999999999999999999853 3566666 7786542 4567788889
Q ss_pred cCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC------CCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEE
Q 001705 542 YDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAL------VEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGL 615 (1024)
Q Consensus 542 ~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~------~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gl 615 (1024)
+++.++|.|.|+++.+++..+|+.| |++|+||. .|+||++++||||||+|||+++.|+..|++.++.+|+
T Consensus 241 ~~~~~~v~~~g~~~~~~l~~~~~~a----d~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~ 316 (367)
T cd05844 241 LGLGGRVTFLGAQPHAEVRELMRRA----RIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGL 316 (367)
T ss_pred cCCCCeEEECCCCCHHHHHHHHHhC----CEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeE
Confidence 8998999999999999999999999 99999997 5999999999999999999999999999999999999
Q ss_pred EeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHH
Q 001705 616 LVDPHDQNAIADALLKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYLS 664 (1024)
Q Consensus 616 lv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~ 664 (1024)
++++.|+++++++|.+++++++++++++.++++.+ ++|||+.+++++.+
T Consensus 317 ~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 317 LVPEGDVAALAAALGRLLADPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred EECCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 99999999999999999999999999999999998 69999999998865
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=322.91 Aligned_cols=366 Identities=17% Similarity=0.187 Sum_probs=246.6
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++++.. ...||+++++.+|++.|.+.| |+|++++.... +.. +...
T Consensus 1 ki~~~~~~-------------~~~GGv~~~~~~l~~~l~~~g--~~v~~~~~~~~-~~~---~~~~-------------- 47 (372)
T cd03792 1 KVLHVNST-------------PYGGGVAEILHSLVPLMRDLG--VDTRWEVIKGD-PEF---FNVT-------------- 47 (372)
T ss_pred CeEEEeCC-------------CCCCcHHHHHHHHHHHHHHcC--CCceEEecCCC-hhH---HHHH--------------
Confidence 57888743 357999999999999999999 99999987421 110 0000
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCE
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPM 330 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipi 330 (1024)
. .+..+..++. ..++.. +...+. ....... ..... ..+|||||+|++....++. +.+..++|+
T Consensus 48 ~-~~~~~~~g~~-~~~~~~----~~~~~~----~~~~~~~---~~~~~---~~~~Dvv~~h~~~~~~~~~-~~~~~~~~~ 110 (372)
T cd03792 48 K-KFHNALQGAD-IELSEE----EKEIYL----EWNEENA---ERPLL---DLDADVVVIHDPQPLALPL-FKKKRGRPW 110 (372)
T ss_pred H-HhhHhhcCCC-CCCCHH----HHHHHH----HHHHHHh---ccccc---cCCCCEEEECCCCchhHHH-hhhcCCCeE
Confidence 0 1111111221 111111 000111 1111111 10111 1479999999886433332 233348999
Q ss_pred EEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhc
Q 001705 331 VLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQR 410 (1024)
Q Consensus 331 V~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~ 410 (1024)
|++.|+.... .....+++ .+..+..+|.+++.+.+.... . +.
T Consensus 111 i~~~H~~~~~-------------~~~~~~~~------~~~~~~~~d~~i~~~~~~~~~---~---~~------------- 152 (372)
T cd03792 111 IWRCHIDLSS-------------PNRRVWDF------LQPYIEDYDAAVFHLPEYVPP---Q---VP------------- 152 (372)
T ss_pred EEEeeeecCC-------------CcHHHHHH------HHHHHHhCCEEeecHHHhcCC---C---CC-------------
Confidence 9999964211 00111111 234567899999988433221 0 11
Q ss_pred CccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcc-hHHHhhhhCCCCCcEEEEEeCCCCC
Q 001705 411 GVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPM-WSEVMRFFTNPHKPTILALSRPDPK 489 (1024)
Q Consensus 411 g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~Il~vgRld~~ 489 (1024)
. +..+||||+|........ ..+.. .....++...+++++|+++||+++.
T Consensus 153 --------~-~~~vipngvd~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~ 202 (372)
T cd03792 153 --------P-RKVIIPPSIDPLSGKNRE---------------------LSPADIEYILEKYGIDPERPYITQVSRFDPW 202 (372)
T ss_pred --------C-ceEEeCCCCCCCccccCC---------------------CCHHHHHHHHHHhCCCCCCcEEEEEeccccc
Confidence 1 333999999975321111 01111 1223345556788999999999999
Q ss_pred CCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCC--CCCCHHHHHHHh
Q 001705 490 KNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHH--KQSDVPDIYRLA 566 (1024)
Q Consensus 490 Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~--~~~el~~ly~~A 566 (1024)
||++.+++|+..+.+ ..+++.| ++|+++..+. .....+.++.+..++.++|.|.|.. +.+++..+|+.|
T Consensus 203 Kg~~~ll~a~~~l~~--~~~~~~l~i~G~g~~~~~------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~a 274 (372)
T cd03792 203 KDPFGVIDAYRKVKE--RVPDPQLVLVGSGATDDP------EGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRAS 274 (372)
T ss_pred cCcHHHHHHHHHHHh--hCCCCEEEEEeCCCCCCc------hhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHhC
Confidence 999999999999853 3345554 7788754211 1112233444456777889998876 788999999999
Q ss_pred hcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 001705 567 AKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNG 646 (1024)
Q Consensus 567 ~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~ 646 (1024)
|+|++||.+||||++++||||||+|||+|+.||..+++.++.+|++++ +.++++.+|.++++++++++++++++
T Consensus 275 ----d~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~~~a~~i~~ll~~~~~~~~~~~~a 348 (372)
T cd03792 275 ----TVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVEEAAVRILYLLRDPELRRKMGANA 348 (372)
T ss_pred ----eEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999997 56789999999999999999999999
Q ss_pred HHHH-hcCCHHHHHHHHHHHHHH
Q 001705 647 LKNI-HRFSWPEHCRNYLSHVEH 668 (1024)
Q Consensus 647 ~~~~-~~fsw~~~a~~~l~~~~~ 668 (1024)
++.+ ++|||+..+++|++.|+.
T Consensus 349 ~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 349 REHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHh
Confidence 9998 699999999999999975
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-32 Score=322.54 Aligned_cols=293 Identities=21% Similarity=0.282 Sum_probs=233.3
Q ss_pred CcceEEEEcCC-ChHHHHHHHHccCCCCEEEEeCCCchhhhH-HHHhcCCCCcchh-hHHHHHHHHHHHHHhhhcCCEEE
Q 001705 303 TWPYVIHGHYA-DAGEVAAHLSGALNVPMVLTGHSLGRNKFE-QLLKQGRLPKDIN-ASYKIMRRIEAEELGLDASEMVV 379 (1024)
Q Consensus 303 ~~pDvIh~h~~-~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~-~l~~~g~~~~~i~-~~y~~~r~i~~e~~~l~~Ad~Vi 379 (1024)
.++|+||+|.. .+++++.++++..++|+|+|.|+....... .+........... ...++++.+ ++.+++.||.|+
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~ad~Ii 249 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESL--GRLAYQAADRIT 249 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHH--HHHHHHhCCEEE
Confidence 37899999975 467778888888999999999997543221 1211110000111 112233333 567889999999
Q ss_pred eCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccC
Q 001705 380 TSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKR 459 (1024)
Q Consensus 380 ~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (1024)
+.|+...+.+... |.+..++.|||||+|.+.|.+...
T Consensus 250 ~~s~~~~~~~~~~-----------------------g~~~~ki~vIpNgid~~~f~~~~~-------------------- 286 (475)
T cd03813 250 TLYEGNRERQIED-----------------------GADPEKIRVIPNGIDPERFAPARR-------------------- 286 (475)
T ss_pred ecCHHHHHHHHHc-----------------------CCCHHHeEEeCCCcCHHHcCCccc--------------------
Confidence 9998766554321 112238999999999988865431
Q ss_pred CCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHH
Q 001705 460 NLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKL 538 (1024)
Q Consensus 460 ~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~ 538 (1024)
. ...++.++|+++||+.+.||++.+++|+..+.+ ..+++.+ |+|.++. ...+..++.++
T Consensus 287 ~-----------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~p~~~l~IvG~g~~-------~~~~~~e~~~l 346 (475)
T cd03813 287 A-----------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRK--KIPDAEGWVIGPTDE-------DPEYAEECREL 346 (475)
T ss_pred c-----------ccCCCCcEEEEEeccccccCHHHHHHHHHHHHH--hCCCeEEEEECCCCc-------ChHHHHHHHHH
Confidence 0 012467899999999999999999999998853 4577776 7787752 23567889999
Q ss_pred HHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhcc------CC
Q 001705 539 IDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKA------LN 612 (1024)
Q Consensus 539 i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~------~~ 612 (1024)
++++++.++|.|+| .+++.++|+.| |++|+||..|+||++++||||||+|||+|+.|+..|++.+ +.
T Consensus 347 i~~l~l~~~V~f~G---~~~v~~~l~~a----Dv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~ 419 (475)
T cd03813 347 VESLGLEDNVKFTG---FQNVKEYLPKL----DVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGP 419 (475)
T ss_pred HHHhCCCCeEEEcC---CccHHHHHHhC----CEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCC
Confidence 99999999999999 57999999999 9999999999999999999999999999999999999988 56
Q ss_pred cEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 001705 613 NGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 613 ~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~ 667 (1024)
+|++++|.|+++++++|.++++|++.++++++++++.+ +.|+|+.++++|.++|+
T Consensus 420 ~G~lv~~~d~~~la~ai~~ll~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 420 AGEVVPPADPEALARAILRLLKDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred ceEEECCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 89999999999999999999999999999999999999 68999999999999873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=325.18 Aligned_cols=362 Identities=17% Similarity=0.159 Sum_probs=286.7
Q ss_pred CCeEEEEecCCCC-----CCccccccCCcchHHHHH----------HHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC
Q 001705 250 CGAYIIRIPCGAR-----DKYIAKESLWPYIHEFVD----------GALNHIVNMARAIGEQVNGGKPTWPYVIHGHYAD 314 (1024)
Q Consensus 250 ~gv~i~rip~~~~-----~~~~~k~~lwp~~~~f~~----------~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~ 314 (1024)
.++....++..+. ..+++|..|||.+|++.+ .....++.|++++.+.+.+| |+||+|+++
T Consensus 59 ~~~~~~~v~L~~~~~~~yY~gfsn~~LWPlfHy~~~~~~~~~~~w~~Y~~VN~~FA~~v~~~~~~~-----D~VWVHDYh 133 (474)
T PRK10117 59 GNITWASFNLSEQDYDEYYNQFSNAVLWPAFHYRLDLVQFQRPAWEGYLRVNALLADKLLPLLKDD-----DIIWIHDYH 133 (474)
T ss_pred CCceEEEecCCHHHHHHHHhhhhhcchhhhhCCCCCccCcCHHHHHHHHHHHHHHHHHHHHhcCCC-----CEEEEeccH
Confidence 3566777765433 357899999999987543 23344577888888888775 999999999
Q ss_pred hHHHHHHHHccC-CCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhh---cCCEEEeCCHHHHHHHH
Q 001705 315 AGEVAAHLSGAL-NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLD---ASEMVVTSTRQEIEMQW 390 (1024)
Q Consensus 315 ~~~~a~~l~~~~-~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~---~Ad~Vi~~S~~~~~~~~ 390 (1024)
+.+++.++++.. ..++.|++| .+++...+++.+++.+.+++ +||+|.++|..++++
T Consensus 134 L~llp~~LR~~~~~~~IgFFlH------------------iPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rn-- 193 (474)
T PRK10117 134 LLPFASELRKRGVNNRIGFFLH------------------IPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLA-- 193 (474)
T ss_pred hhHHHHHHHHhCCCCcEEEEEe------------------CCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHH--
Confidence 999999999765 689999999 77888889999998877776 999999999999988
Q ss_pred hcccCcchHHHHHHHHhhhcC-ccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHh
Q 001705 391 GLYDGFDLKLERKLRVRRQRG-VSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVM 469 (1024)
Q Consensus 391 ~~~~~f~~~~~r~l~~~~~~g-~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 469 (1024)
|...+.++++.....| ...++.+..++.++|.|||++.|..... .+.......++
T Consensus 194 -----Fl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~-------------------~~~~~~~~~lr 249 (474)
T PRK10117 194 -----FLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAA-------------------GPLPPKLAQLK 249 (474)
T ss_pred -----HHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhh-------------------chHHHHHHHHH
Confidence 7777788777665332 2222233448999999999998854431 01111112222
Q ss_pred hhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCC----cEEEE-E-----ecCCCcccccccchHHHHHHHHHH
Q 001705 470 RFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELA----NMTLI-L-----GNRDDIEDMSNSSSVVLTTVLKLI 539 (1024)
Q Consensus 470 ~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~----~l~LI-v-----G~~~~~~~l~~~~~~~~~~i~~~i 539 (1024)
..+ .++++|+.++|+|+.||+...++||+++. ..+| +++|+ + ++.+.|+++..+..+..++|++..
T Consensus 250 ~~~--~~~~lilgVDRLDytKGi~~rl~Afe~fL--~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~f 325 (474)
T PRK10117 250 AEL--KNVQNIFSVERLDYSKGLPERFLAYEALL--EKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKY 325 (474)
T ss_pred HHc--CCCeEEEEecccccccCHHHHHHHHHHHH--HhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhcc
Confidence 222 46889999999999999999999999994 5555 34443 2 455667888888899999999999
Q ss_pred HHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc------CCcEEEcCCCCchhhhccCCc
Q 001705 540 DKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAY------GLPVVATKNGGPVDILKALNN 613 (1024)
Q Consensus 540 ~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~------G~PVVat~~Gg~~eii~~~~~ 613 (1024)
.+.+|.+..++...++++++.++|+.| ||+++||+.||||||++||.|| |+.|++..+|+..++ ..
T Consensus 326 g~~~w~Pv~y~~~~~~~~~l~alyr~A----Dv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L----~~ 397 (474)
T PRK10117 326 GQLGWTPLYYLNQHFDRKLLMKIFRYS----DVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL----TS 397 (474)
T ss_pred CCCCceeEEEecCCCCHHHHHHHHHhc----cEEEecccccccccccchheeeecCCCCccEEEecccchHHHh----CC
Confidence 999999999999999999999999999 9999999999999999999999 667888888888777 35
Q ss_pred EEEeCCCCHHHHHHHHHHHHhCHHH-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhc
Q 001705 614 GLLVDPHDQNAIADALLKLLADKNM-WSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNR 672 (1024)
Q Consensus 614 Gllv~p~d~~~la~aI~~ll~d~~~-~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~ 672 (1024)
+++|||+|.+++|+||.++|++|.. +++..+..++.+..++...|++.|++.+..+...
T Consensus 398 AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~~~ 457 (474)
T PRK10117 398 ALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPR 457 (474)
T ss_pred CeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999998654 4444455555669999999999999999887543
|
|
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=316.07 Aligned_cols=385 Identities=16% Similarity=0.147 Sum_probs=258.0
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHH----HHHHHHHcCCC------ceEEEEEecCCCCCCCCcccCCCcccc
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVV----ELARALANTEG------VYRVDLLTRQIASPEVDSSYGEPNEML 240 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~----~La~aLa~~g~------v~~V~vlt~~~~~p~~~~~y~~~~e~l 240 (1024)
.+++++.. +| .||+++.++ ++++.+.+.+. -..|.|+||... |....++.-+.- .
T Consensus 163 ~~~~~~~~---------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~ 227 (578)
T PRK15490 163 RLALCTGS---------LG----SGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLT-PELRQDFFLKEV-L 227 (578)
T ss_pred ceEEEecC---------CC----CCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecC-cccCcchhHHHH-H
Confidence 57888744 66 699999999 55555555541 126889998764 222222211110 0
Q ss_pred CCCCCCCCCCCeEEEEecCCCCCCcccccc-CCcchHHHHHH----HHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCh
Q 001705 241 SCPSDGTGSCGAYIIRIPCGARDKYIAKES-LWPYIHEFVDG----ALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADA 315 (1024)
Q Consensus 241 ~~~~~~~~~~gv~i~rip~~~~~~~~~k~~-lwp~~~~f~~~----~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~ 315 (1024)
+...++..+-.++. ..+.+-. +-|.+..|+.+ +..-+..+...+.+ .+|||||+|...+
T Consensus 228 -----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ir~-------~rpDIVHt~~~~a 291 (578)
T PRK15490 228 -----EEQVEVLEIAKITG----NLFDDATIESPELRLLLSHLPPVCKYGIKHLVPHLCE-------RKLDYLSVWQDGA 291 (578)
T ss_pred -----hcCCceEEeeccch----hhhhhccccchHHHHHHhcCChHHHHHHHHHHHHHHH-------cCCCEEEEcCccc
Confidence 01123344444442 1122221 23434444332 22233444444444 6899999998876
Q ss_pred HHHHHHHHccCCCCEEEE-eCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCE------EEeCCHHHHHH
Q 001705 316 GEVAAHLSGALNVPMVLT-GHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEM------VVTSTRQEIEM 388 (1024)
Q Consensus 316 ~~~a~~l~~~~~ipiV~t-~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~------Vi~~S~~~~~~ 388 (1024)
...+.+.+...++|++++ .|++.... . .+.+..|...+..++. +++.+....+.
T Consensus 292 ~l~g~laA~lagvpviv~~~h~~~~~~----------------~---~r~~~~e~~~~~~a~~i~~~sd~v~~s~~v~~~ 352 (578)
T PRK15490 292 CLMIALAALIAGVPRIQLGLRGLPPVV----------------R---KRLFKPEYEPLYQALAVVPGVDFMSNNHCVTRH 352 (578)
T ss_pred HHHHHHHHHhcCCCEEEEeecccCCcc----------------h---hhHHHHHHHHhhhhceeEecchhhhccHHHHHH
Confidence 666777776679999665 56421110 0 0111122233344444 34444433333
Q ss_pred HHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCC-cchHH
Q 001705 389 QWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLP-PMWSE 467 (1024)
Q Consensus 389 ~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~ 467 (1024)
+...+ +.+..++.|||||||...|.+... .+ ..+..
T Consensus 353 l~~~l----------------------gip~~KI~VIyNGVD~~rf~p~~~---------------------~~~~~r~~ 389 (578)
T PRK15490 353 YADWL----------------------KLEAKHFQVVYNGVLPPSTEPSSE---------------------VPHKIWQQ 389 (578)
T ss_pred HHHHh----------------------CCCHHHEEEEeCCcchhhcCccch---------------------hhHHHHHH
Confidence 22221 122348999999999988866431 00 00110
Q ss_pred HhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCC
Q 001705 468 VMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYG 546 (1024)
Q Consensus 468 ~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~ 546 (1024)
. +....++.++|+++||+.+.||...+++++..+. ...|++.| |+|+++. ..++.++++++++.+
T Consensus 390 ~-~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~ll--k~~pdirLvIVGdG~~-----------~eeLk~la~elgL~d 455 (578)
T PRK15490 390 F-TQKTQDADTTIGGVFRFVGDKNPFAWIDFAARYL--QHHPATRFVLVGDGDL-----------RAEAQKRAEQLGILE 455 (578)
T ss_pred h-hhccCCCCcEEEEEEEEehhcCHHHHHHHHHHHH--hHCCCeEEEEEeCchh-----------HHHHHHHHHHcCCCC
Confidence 0 1112355689999999999999999999998874 34567766 7788753 456788899999999
Q ss_pred CEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHH
Q 001705 547 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIA 626 (1024)
Q Consensus 547 ~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la 626 (1024)
+|.|+|+ .++++.+|+.| |+||+||.+||||++++||||||+|||+|+.||..|+|.++.+|++|+|.|+.+++
T Consensus 456 ~V~FlG~--~~Dv~~~LaaA----DVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa 529 (578)
T PRK15490 456 RILFVGA--SRDVGYWLQKM----NVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFILDDAQTVNLD 529 (578)
T ss_pred cEEECCC--hhhHHHHHHhC----CEEEEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEECCCChhhHH
Confidence 9999999 57999999999 99999999999999999999999999999999999999999999999999999998
Q ss_pred HHH---HHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHH
Q 001705 627 DAL---LKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYLSHVEH 668 (1024)
Q Consensus 627 ~aI---~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~ 668 (1024)
+++ .++.........+++++++.+ ++|||+.++++|.+.|.+
T Consensus 530 ~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 530 QACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 887 445555555667889999999 699999999999999974
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=304.94 Aligned_cols=244 Identities=24% Similarity=0.417 Sum_probs=189.8
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCC
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWR 830 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~ 830 (1024)
+|++|+||||.+.+......+.+.++.... +++.|+++|||++.++++++.+.+++ .||++||++|++||+. .
T Consensus 4 ll~sDlD~Tl~~~~~~~~~~l~~~l~~~~~----~~~~~v~~TGRs~~~~~~~~~~~~l~--~Pd~~I~svGt~I~~~-~ 76 (247)
T PF05116_consen 4 LLASDLDGTLIDGDDEALARLEELLEQQAR----PEILFVYVTGRSLESVLRLLREYNLP--QPDYIITSVGTEIYYG-E 76 (247)
T ss_dssp EEEEETBTTTBHCHHHHHHHHHHHHHHHHC----CGEEEEEE-SS-HHHHHHHHHHCT-E--E-SEEEETTTTEEEES-S
T ss_pred EEEEECCCCCcCCCHHHHHHHHHHHHHhhC----CCceEEEECCCCHHHHHHHHHhCCCC--CCCEEEecCCeEEEEc-C
Confidence 567999999774445566777777773333 58999999999999999999998884 5999999999999995 3
Q ss_pred ccccCcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEE
Q 001705 831 DMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNL 910 (1024)
Q Consensus 831 ~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v 910 (1024)
...+|..|..++...|..+.++.++..+.. +..+....+..||++|++........+++|++.|+..+.++++
T Consensus 77 ~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~-------l~~q~~~~q~~~k~sy~~~~~~~~~~~~~i~~~l~~~~l~~~~ 149 (247)
T PF05116_consen 77 NWQPDEEWQAHIDERWDRERVEEILAELPG-------LRPQPESEQRPFKISYYVDPDDSADILEEIRARLRQRGLRVNV 149 (247)
T ss_dssp TTEE-HHHHHHHHTT--HHHHHHHHHCHCC-------EEEGGCCCGCCTCECEEEETTSHCHHHHHHHHHHHCCTCEEEE
T ss_pred CCcChHHHHHHHHhcCChHHHHHHHHHhhC-------cccCCccccCCeeEEEEEecccchhHHHHHHHHHHHcCCCeeE
Confidence 677899999999999999889888887765 4577777888999999997665444588999999999999999
Q ss_pred EEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCC
Q 001705 911 VYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFK 990 (1024)
Q Consensus 911 ~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~ 990 (1024)
++|++. +|||+|.++|||.||+||+++|++++++++++ |||+| | ++||.....||+|+ ||.++++......
T Consensus 150 i~s~~~-~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~a-GDSgN-D-~~mL~~~~~~vvV~----Na~~e~~~~~~~~- 220 (247)
T PF05116_consen 150 IYSNGR-DLDILPKGASKGAALRYLMERWGIPPEQVLVA-GDSGN-D-LEMLEGGDHGVVVG----NAQPELLSWLLEK- 220 (247)
T ss_dssp EECTCC-EEEEEETT-SHHHHHHHHHHHHT--GGGEEEE-ESSGG-G-HHHHCCSSEEEE-T----TS-HHHHHHHHHC-
T ss_pred EEccce-eEEEccCCCCHHHHHHHHHHHhCCCHHHEEEE-eCCCC-c-HHHHcCcCCEEEEc----CCCHHHHHHHHHh-
Confidence 999886 99999999999999999999999999999997 99999 9 99999999999999 9999933321100
Q ss_pred CCCccCCCCCCeeEeccccChhHHHHHHHhccc
Q 001705 991 REDVVPPDSPNIAYIEESYEPQDLSAALKAIKI 1023 (1024)
Q Consensus 991 ~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~~~ 1023 (1024)
....++| |++....+.||.++|+|||+
T Consensus 221 -----~~~~~~i-y~a~~~~a~GIlegl~~~~~ 247 (247)
T PF05116_consen 221 -----LRQQERI-YFAQGPYAAGILEGLQHFGF 247 (247)
T ss_dssp -----C-TTE---EE-SS-THHHHHHHHHHTTT
T ss_pred -----cccCCce-EecCCCCcHHHHHHHHHcCC
Confidence 0012233 56678889999999999986
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-32 Score=307.16 Aligned_cols=341 Identities=23% Similarity=0.296 Sum_probs=255.8
Q ss_pred CChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCCeEEEEecCCCCCCccccccCCc
Q 001705 194 TGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWP 273 (1024)
Q Consensus 194 ~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~lwp 273 (1024)
.||.++++.+|+++|+++| |+|.+++...... .. ....|+.++.++..... .+.
T Consensus 9 ~gG~e~~~~~l~~~L~~~g--~~v~v~~~~~~~~-------~~----------~~~~~~~~~~~~~~~~~-------~~~ 62 (355)
T cd03819 9 SGGVERGTLELARALVERG--HRSLVASAGGRLV-------AE----------LEAEGSRHIKLPFISKN-------PLR 62 (355)
T ss_pred cCcHHHHHHHHHHHHHHcC--CEEEEEcCCCchH-------HH----------HHhcCCeEEEccccccc-------hhh
Confidence 5999999999999999999 9999998642100 01 11236777777643221 111
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCc
Q 001705 274 YIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPK 353 (1024)
Q Consensus 274 ~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~ 353 (1024)
.+ .....+.+.+.+ .+||+||+|.....+.+.++.+..++|++++.|+......
T Consensus 63 ~~--------~~~~~l~~~~~~-------~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~----------- 116 (355)
T cd03819 63 IL--------LNVARLRRLIRE-------EKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF----------- 116 (355)
T ss_pred hH--------HHHHHHHHHHHH-------cCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH-----------
Confidence 11 111122222322 5799999999877777777777789999999997633210
Q ss_pred chhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCC
Q 001705 354 DINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSY 433 (1024)
Q Consensus 354 ~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~ 433 (1024)
.....+..+|.+++.|+...+.+...++ .+..++.+||||+|...
T Consensus 117 -------------~~~~~~~~~~~vi~~s~~~~~~~~~~~~----------------------~~~~k~~~i~ngi~~~~ 161 (355)
T cd03819 117 -------------RYNAIMARGDRVIAVSNFIADHIRENYG----------------------VDPDRIRVIPRGVDLDR 161 (355)
T ss_pred -------------HHHHHHHhcCEEEEeCHHHHHHHHHhcC----------------------CChhhEEEecCCccccc
Confidence 1233467899999999877766432222 12238999999999988
Q ss_pred ccccCCCCCCccccccccCccccccCCCCcch-HHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEE
Q 001705 434 VTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMW-SEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMT 512 (1024)
Q Consensus 434 f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~ 512 (1024)
|.+... .+... ..+.++...++.++|+++||+.+.||++.+++|+..+.+ ..+++.
T Consensus 162 ~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~--~~~~~~ 218 (355)
T cd03819 162 FDPGAV---------------------PPERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALARLKK--DDPDVH 218 (355)
T ss_pred cCcccc---------------------chHHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHHHHh--cCCCeE
Confidence 754431 00001 122233345678899999999999999999999999863 345666
Q ss_pred E-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecC-CCCCCCHHHHHHH
Q 001705 513 L-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPA-LVEPFGLTIIEAA 590 (1024)
Q Consensus 513 L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps-~~Egfgl~llEAm 590 (1024)
+ ++|.++..+ .+...+.+.+.++++.++|.|+|+ .+++..+|+.| |++++|| ..|+||++++|||
T Consensus 219 l~ivG~~~~~~-------~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~l~~a----d~~i~ps~~~e~~~~~l~EA~ 285 (355)
T cd03819 219 LLIVGDAQGRR-------FYYAELLELIKRLGLQDRVTFVGH--CSDMPAAYALA----DIVVSASTEPEAFGRTAVEAQ 285 (355)
T ss_pred EEEEECCcccc-------hHHHHHHHHHHHcCCcceEEEcCC--cccHHHHHHhC----CEEEecCCCCCCCchHHHHHH
Confidence 6 778776432 345666778888899899999999 78999999999 9999999 7899999999999
Q ss_pred HcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHH-hCHHHHHHHHHHHHHHH-hcCCHHH
Q 001705 591 AYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLL-ADKNMWSECRKNGLKNI-HRFSWPE 657 (1024)
Q Consensus 591 A~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll-~d~~~~~~~~~~~~~~~-~~fsw~~ 657 (1024)
|||+|||+++.||..|++.++.+|++++++|+++++++|..++ .++++++++++++++.+ ++|||+.
T Consensus 286 a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f~~~~ 354 (355)
T cd03819 286 AMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVETLFSYDR 354 (355)
T ss_pred hcCCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 9999999999999999999988999999999999999997555 48999999999999999 6999975
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-31 Score=303.47 Aligned_cols=352 Identities=22% Similarity=0.275 Sum_probs=256.7
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
|||+|+.. |+ |+.||.++++.+|+++|.+.| |+|+|++........ . ....
T Consensus 1 kil~i~~~---------~~--p~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~-------~---------~~~~ 51 (357)
T cd03795 1 RVLHVGKF---------YP--PDRGGIEQVIRDLAEGLAARG--IEVAVLCASPEPKGR-------D---------EERN 51 (357)
T ss_pred CeeEecCC---------CC--CCCCcHHHHHHHHHHHHHhCC--CceEEEecCCCCcch-------h---------hhcc
Confidence 68999866 33 569999999999999999999 999999886432210 0 1123
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCE
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPM 330 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipi 330 (1024)
+..+++++.... ...++....+.. ... + ...+||+||+|+..............++|+
T Consensus 52 ~~~~~~~~~~~~------~~~~~~~~~~~~----~~~-----~-------~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~ 109 (357)
T cd03795 52 GHRVIRAPSLLN------VASTPFSPSFFK----QLK-----K-------LAKKADVIHLHFPNPLADLALLLLPRKKPV 109 (357)
T ss_pred CceEEEeecccc------cccccccHHHHH----HHH-----h-------cCCCCCEEEEecCcchHHHHHHHhccCceE
Confidence 556666653211 011111111111 000 1 125799999998644333333333368999
Q ss_pred EEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhc
Q 001705 331 VLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQR 410 (1024)
Q Consensus 331 V~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~ 410 (1024)
+++.|+.... .. ..+.+.+.+ ++..++.||.|++.|+...+.+..++..
T Consensus 110 i~~~h~~~~~-------~~-------~~~~~~~~~--~~~~~~~~d~vi~~s~~~~~~~~~~~~~--------------- 158 (357)
T cd03795 110 VVHWHSDIVK-------QK-------LLLKLYRPL--QRRFLRRADAIVATSPNYAETSPVLRRF--------------- 158 (357)
T ss_pred EEEEcChhhc-------cc-------hhhhhhhHH--HHHHHHhcCEEEeCcHHHHHHHHHhcCC---------------
Confidence 9999964211 00 011122222 4557899999999998877654333211
Q ss_pred CccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCC
Q 001705 411 GVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKK 490 (1024)
Q Consensus 411 g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~K 490 (1024)
..++.+||||+|...+.+... . .........+.+.|+++||+.+.|
T Consensus 159 --------~~~~~~i~~gi~~~~~~~~~~---------------------~-----~~~~~~~~~~~~~i~~~G~~~~~K 204 (357)
T cd03795 159 --------RDKVRVIPLGLDPARYPRPDA---------------------L-----EEAIWRRAAGRPFFLFVGRLVYYK 204 (357)
T ss_pred --------ccceEEecCCCChhhcCCcch---------------------h-----hhHhhcCCCCCcEEEEeccccccc
Confidence 128999999999987754331 0 001112235678999999999999
Q ss_pred CHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcC
Q 001705 491 NVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKT 569 (1024)
Q Consensus 491 gi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~ 569 (1024)
|++.+++|+.++. ++.+ ++|+++. ...+.+.+.+++...+|.|+|+++++++..+|+.|
T Consensus 205 ~~~~li~a~~~l~------~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~a--- 264 (357)
T cd03795 205 GLDVLLEAAAALP------DAPLVIVGEGPL-----------EAELEALAAALGLLDRVRFLGRLDDEEKAALLAAC--- 264 (357)
T ss_pred CHHHHHHHHHhcc------CcEEEEEeCChh-----------HHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhC---
Confidence 9999999999883 4444 7787653 34566777888999999999999999999999999
Q ss_pred CcEEEecCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhcc-CCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 001705 570 KGVFINPAL--VEPFGLTIIEAAAYGLPVVATKNGGPVDILKA-LNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNG 646 (1024)
Q Consensus 570 ~dv~v~ps~--~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~-~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~ 646 (1024)
|++++||. .|+||++++|||+||+|||+|+.|+..+.+.+ +.+|++++++|+++++++|.+++++++.++++++++
T Consensus 265 -d~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~~~~~~~~~~~ 343 (357)
T cd03795 265 -DVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDPELRERLGEAA 343 (357)
T ss_pred -CEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCHHHHHHHHHHH
Confidence 99999986 59999999999999999999999999998886 899999999999999999999999999999999999
Q ss_pred HHHH-hcCCHHHHH
Q 001705 647 LKNI-HRFSWPEHC 659 (1024)
Q Consensus 647 ~~~~-~~fsw~~~a 659 (1024)
++.+ ++|||+.++
T Consensus 344 ~~~~~~~~s~~~~~ 357 (357)
T cd03795 344 RERAEEEFTADRMV 357 (357)
T ss_pred HHHHHHhcchHhhC
Confidence 9999 799998763
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-32 Score=306.21 Aligned_cols=361 Identities=23% Similarity=0.261 Sum_probs=260.3
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++|+.. ++ |..||.+.++..|+++|.++| |+|++++.....+.... . .
T Consensus 1 kIl~i~~~---------~~--p~~~G~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~~~~---~--------------~ 50 (364)
T cd03814 1 RIAIVTDT---------FL--PQVNGVVRTLQRLVEHLRARG--HEVLVIAPGPFRESEGP---A--------------R 50 (364)
T ss_pred CeEEEecc---------cC--ccccceehHHHHHHHHHHHCC--CEEEEEeCCchhhccCC---C--------------C
Confidence 68999966 33 556999999999999999999 99999998743211000 0 1
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC-ChHHHHHHHHccCCCC
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYA-DAGEVAAHLSGALNVP 329 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~-~~~~~a~~l~~~~~ip 329 (1024)
...+...+.... ...... +.. ...+.+.+.+ .+||+||+|.. ..+..+..+++..++|
T Consensus 51 ~~~~~~~~~~~~----~~~~~~--~~~--------~~~~~~~~~~-------~~pdii~~~~~~~~~~~~~~~~~~~~~~ 109 (364)
T cd03814 51 VVPVPSVPLPGY----PEIRLA--LPP--------RRRVRRLLDA-------FAPDVVHIATPGPLGLAALRAARRLGIP 109 (364)
T ss_pred ceeecccccCcc----cceEec--ccc--------hhhHHHHHHh-------cCCCEEEEeccchhhHHHHHHHHHcCCC
Confidence 222222221111 000000 000 0111111111 57999999875 3456666777778999
Q ss_pred EEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh
Q 001705 330 MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409 (1024)
Q Consensus 330 iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~ 409 (1024)
++++.|+.+........ . . ....+... .++..++.+|.+++.|....+.+...+.
T Consensus 110 ~i~~~~~~~~~~~~~~~-----~-~--~~~~~~~~--~~~~~~~~~d~i~~~s~~~~~~~~~~~~--------------- 164 (364)
T cd03814 110 VVTSYHTDFPEYLRYYG-----L-G--PLSWLAWA--YLRWFHNRADRVLVPSPSLADELRARGF--------------- 164 (364)
T ss_pred EEEEEecChHHHhhhcc-----c-c--hHhHhhHH--HHHHHHHhCCEEEeCCHHHHHHHhccCC---------------
Confidence 99999986543221110 0 0 01111111 2455688999999999987764322211
Q ss_pred cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCC
Q 001705 410 RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPK 489 (1024)
Q Consensus 410 ~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~ 489 (1024)
.++.++|+|+|.+.|.+... + .....++. .++++.|+++||+.+.
T Consensus 165 ----------~~~~~~~~g~~~~~~~~~~~----------------------~--~~~~~~~~-~~~~~~i~~~G~~~~~ 209 (364)
T cd03814 165 ----------RRVRLWPRGVDTELFHPRRR----------------------D--EALRARLG-PPDRPVLLYVGRLAPE 209 (364)
T ss_pred ----------CceeecCCCccccccCcccc----------------------c--HHHHHHhC-CCCCeEEEEEeccccc
Confidence 27899999999988765431 0 00111121 3557899999999999
Q ss_pred CCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhc
Q 001705 490 KNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 568 (1024)
Q Consensus 490 Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~ 568 (1024)
||++.+++++..+.. . +++.+ ++|.+++.+. +. +...+|.|.|+++.+++..+|+.|
T Consensus 210 k~~~~~i~~~~~l~~--~-~~~~l~i~G~~~~~~~-----------~~------~~~~~v~~~g~~~~~~~~~~~~~~-- 267 (364)
T cd03814 210 KNLEALLDADLPLRR--R-PPVRLVIVGDGPARAR-----------LE------ARYPNVHFLGFLDGEELAAAYASA-- 267 (364)
T ss_pred cCHHHHHHHHHHhhh--c-CCceEEEEeCCchHHH-----------Hh------ccCCcEEEEeccCHHHHHHHHHhC--
Confidence 999999999999964 2 55665 7787664222 11 456789999999999999999999
Q ss_pred CCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 001705 569 TKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLK 648 (1024)
Q Consensus 569 ~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~ 648 (1024)
|++|+|+..|+||++++||||||+|||+++.|+..+++.++.+|+++++.|.++++++|.+++++++.+.++++++++
T Consensus 268 --d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~ 345 (364)
T cd03814 268 --DVFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADPELRRRMAARARA 345 (364)
T ss_pred --CEEEECcccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999989999999999999999999999999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHH
Q 001705 649 NIHRFSWPEHCRNYLSHV 666 (1024)
Q Consensus 649 ~~~~fsw~~~a~~~l~~~ 666 (1024)
.+++|+|+.+++++++.|
T Consensus 346 ~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 346 EAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHhhcCHHHHHHHHHHhh
Confidence 998999999999999887
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-31 Score=311.65 Aligned_cols=410 Identities=16% Similarity=0.141 Sum_probs=274.6
Q ss_pred cccccccCCCceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCce--EEEEEecCCCCCCCCcccCCC
Q 001705 159 IWSEDDKSSRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVY--RVDLLTRQIASPEVDSSYGEP 236 (1024)
Q Consensus 159 ~~~~~~~~~~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~--~V~vlt~~~~~p~~~~~y~~~ 236 (1024)
+|-... ..++++|+|+.++ +| ..||.++.+++.+++|.+.| + .|.++|... |+.- .+.
T Consensus 24 ~~~~~~-~~~~~~v~f~HP~---------~~---~ggG~ERvl~~a~~~l~~~~--~~~~v~iyt~~~-d~~~----~~~ 83 (463)
T PLN02949 24 SVLRAR-RSRKRAVGFFHPY---------TN---DGGGGERVLWCAVRAIQEEN--PDLDCVIYTGDH-DASP----DSL 83 (463)
T ss_pred HHHhcc-cCCCcEEEEECCC---------CC---CCCChhhHHHHHHHHHHhhC--CCCeEEEEcCCC-CCCH----HHH
Confidence 344455 5677899999876 32 45699999999999999998 6 888888763 2211 010
Q ss_pred ccccCCCCCCCCCCCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC-h
Q 001705 237 NEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYAD-A 315 (1024)
Q Consensus 237 ~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~-~ 315 (1024)
.................++++..+ .++ ...+||++.-+.+.+-..... .+++.. ..|| |++.... +
T Consensus 84 l~~~~~~~~i~~~~~~~~v~l~~~---~~~-~~~~~~~~t~~~~~~~~~~l~-~~~~~~-------~~p~-v~vDt~~~~ 150 (463)
T PLN02949 84 AARARDRFGVELLSPPKVVHLRKR---KWI-EEETYPRFTMIGQSLGSVYLA-WEALCK-------FTPL-YFFDTSGYA 150 (463)
T ss_pred HHHHHhhcceecCCCceEEEeccc---ccc-ccccCCceehHHHHHHHHHHH-HHHHHh-------cCCC-EEEeCCCcc
Confidence 000000000011123344444221 344 445788876665433222222 222222 2355 5543321 1
Q ss_pred HHHHHHHHccCCCCEEEEeCCC--chhhhHHHHhcC------------CCCcchhh-HHHHHHHHHHHHHhhhcCCEEEe
Q 001705 316 GEVAAHLSGALNVPMVLTGHSL--GRNKFEQLLKQG------------RLPKDINA-SYKIMRRIEAEELGLDASEMVVT 380 (1024)
Q Consensus 316 ~~~a~~l~~~~~ipiV~t~H~l--~~~~~~~l~~~g------------~~~~~i~~-~y~~~r~i~~e~~~l~~Ad~Vi~ 380 (1024)
..++ ++ +..++|++++.|.- ..+.+....... .+...... .|+.+.. .++...+.||.|++
T Consensus 151 ~~~p-l~-~~~~~~v~~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~--l~~~~~~~ad~ii~ 226 (463)
T PLN02949 151 FTYP-LA-RLFGCKVVCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAW--MYGLVGRCAHLAMV 226 (463)
T ss_pred cHHH-HH-HhcCCcEEEEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHH--HHHHHcCCCCEEEE
Confidence 1111 22 24489999999942 111111110000 00000111 1122222 36677799999999
Q ss_pred CCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCC
Q 001705 381 STRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRN 460 (1024)
Q Consensus 381 ~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1024)
+|+...+.+...+.. ..++.+++||+|.+.+.....
T Consensus 227 nS~~t~~~l~~~~~~-----------------------~~~i~vvyp~vd~~~~~~~~~--------------------- 262 (463)
T PLN02949 227 NSSWTKSHIEALWRI-----------------------PERIKRVYPPCDTSGLQALPL--------------------- 262 (463)
T ss_pred CCHHHHHHHHHHcCC-----------------------CCCeEEEcCCCCHHHcccCCc---------------------
Confidence 998877765443321 127899999999765522110
Q ss_pred CCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhcccc--CCCCcEEE-EEecCCCcccccccchHHHHHHHH
Q 001705 461 LPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPL--RELANMTL-ILGNRDDIEDMSNSSSVVLTTVLK 537 (1024)
Q Consensus 461 ~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l--~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~ 537 (1024)
. ..++++.|+++||+.++||++.+|+||..+.+. ...+++.| |+|++.. .++.++..++++
T Consensus 263 -~----------~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~-----~~~~~~~~eL~~ 326 (463)
T PLN02949 263 -E----------RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRN-----KEDEERLQKLKD 326 (463)
T ss_pred -c----------ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCC-----cccHHHHHHHHH
Confidence 0 013467899999999999999999999987431 12356665 7787642 234456788999
Q ss_pred HHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCch-hhhcc---CCc
Q 001705 538 LIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPV-DILKA---LNN 613 (1024)
Q Consensus 538 ~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~-eii~~---~~~ 613 (1024)
+++++++.++|.|+|+++.+++.++|+.| +++|+|+..|+||++++||||||+|||+++.||+. |++.+ +.+
T Consensus 327 la~~l~L~~~V~f~g~v~~~el~~ll~~a----~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~t 402 (463)
T PLN02949 327 RAKELGLDGDVEFHKNVSYRDLVRLLGGA----VAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQT 402 (463)
T ss_pred HHHHcCCCCcEEEeCCCCHHHHHHHHHhC----cEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcc
Confidence 99999999999999999999999999999 89999999999999999999999999999999975 77765 568
Q ss_pred EEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 001705 614 GLLVDPHDQNAIADALLKLLA-DKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRN 671 (1024)
Q Consensus 614 Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~ 671 (1024)
|++++ |+++++++|.++++ +++.++++++++++.+++|||+..+++|.+.+..+.+
T Consensus 403 G~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~~ 459 (463)
T PLN02949 403 GFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRANRFSEQRFNEDFKDAIRPILN 459 (463)
T ss_pred cccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 99985 99999999999999 5788899999999999889999999999999998765
|
|
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-31 Score=300.23 Aligned_cols=331 Identities=20% Similarity=0.224 Sum_probs=234.1
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGS 249 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~ 249 (1024)
|||++|+.... + .| ++..||.++++.+|+++|.+.| |+|++++.......
T Consensus 1 MkI~~i~~~~~----~--~~-~~~~GG~~~~~~~l~~~L~~~g--~~V~v~~~~~~~~~--------------------- 50 (335)
T cd03802 1 MRIALVAPPRE----P--VP-PPAYGGTERVVAALTEGLVARG--HEVTLFASGDSKTA--------------------- 50 (335)
T ss_pred CeEEEEcCCcc----c--CC-CcccCcHHHHHHHHHHHHHhcC--ceEEEEecCCCCcc---------------------
Confidence 89999997633 0 12 4678999999999999999999 99999997632110
Q ss_pred CCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCC
Q 001705 250 CGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVP 329 (1024)
Q Consensus 250 ~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ip 329 (1024)
.......... ..... + ............+.+.+.+ .+||+||+|.+..... +++..++|
T Consensus 51 --~~~~~~~~~~--~~~~~---~----~~~~~~~~~~~~~~~~~~~-------~~~Divh~~~~~~~~~---~~~~~~~~ 109 (335)
T cd03802 51 --APLVPVVPEP--LRLDA---P----GRDRAEAEALALAERALAA-------GDFDIVHNHSLHLPLP---FARPLPVP 109 (335)
T ss_pred --cceeeccCCC--ccccc---c----hhhHhhHHHHHHHHHHHhc-------CCCCEEEecCcccchh---hhcccCCC
Confidence 0011111000 00000 0 0000111111222222222 4799999998865554 45667899
Q ss_pred EEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh
Q 001705 330 MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409 (1024)
Q Consensus 330 iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~ 409 (1024)
+|++.|+...... .. .......++.+++.|+...+.....
T Consensus 110 ~v~~~h~~~~~~~-------------~~----------~~~~~~~~~~~~~~s~~~~~~~~~~----------------- 149 (335)
T cd03802 110 VVTTLHGPPDPEL-------------LK----------LYYAARPDVPFVSISDAQRRPWPPL----------------- 149 (335)
T ss_pred EEEEecCCCCccc-------------ch----------HHHhhCcCCeEEEecHHHHhhcccc-----------------
Confidence 9999997633211 00 1123567788888887665532110
Q ss_pred cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCC
Q 001705 410 RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPK 489 (1024)
Q Consensus 410 ~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~ 489 (1024)
.++.+||||+|++.|.+.. .+++.|+++||+.+.
T Consensus 150 ----------~~~~vi~ngvd~~~~~~~~------------------------------------~~~~~i~~~Gr~~~~ 183 (335)
T cd03802 150 ----------PWVATVHNGIDLDDYPFRG------------------------------------PKGDYLLFLGRISPE 183 (335)
T ss_pred ----------cccEEecCCcChhhCCCCC------------------------------------CCCCEEEEEEeeccc
Confidence 2899999999998875422 346789999999999
Q ss_pred CCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcC-CCCCEEeCCCCCCCCHHHHHHHhh
Q 001705 490 KNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYD-LYGQVAYPKHHKQSDVPDIYRLAA 567 (1024)
Q Consensus 490 Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~-l~~~V~~~g~~~~~el~~ly~~A~ 567 (1024)
||++.+++++... ++.| ++|.++..+. +........ +.++|.|+|+++.+++..+|+.|
T Consensus 184 Kg~~~li~~~~~~-------~~~l~i~G~~~~~~~-----------~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~- 244 (335)
T cd03802 184 KGPHLAIRAARRA-------GIPLKLAGPVSDPDY-----------FYREIAPELLDGPDIEYLGEVGGAEKAELLGNA- 244 (335)
T ss_pred cCHHHHHHHHHhc-------CCeEEEEeCCCCHHH-----------HHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhC-
Confidence 9999999998654 2334 7788764222 222333322 56789999999999999999999
Q ss_pred cCCcEEEecCC-CCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 001705 568 KTKGVFINPAL-VEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNG 646 (1024)
Q Consensus 568 ~~~dv~v~ps~-~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~ 646 (1024)
|++|+||. .|+||++++||||||+|||+++.||..|++.++.+|+++++ +++++++|.+++..+ .+++
T Consensus 245 ---d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~------~~~~ 313 (335)
T cd03802 245 ---RALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLD------RAAC 313 (335)
T ss_pred ---cEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccH------HHHH
Confidence 99999997 59999999999999999999999999999999889999985 999999999987653 2345
Q ss_pred HHHH-hcCCHHHHHHHHHHHHH
Q 001705 647 LKNI-HRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 647 ~~~~-~~fsw~~~a~~~l~~~~ 667 (1024)
++.+ ++|||+..+++|+++|+
T Consensus 314 ~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 314 RRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred HHHHHHhCCHHHHHHHHHHHhC
Confidence 6666 79999999999999873
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-31 Score=301.51 Aligned_cols=370 Identities=23% Similarity=0.252 Sum_probs=257.5
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++|+.+ ++ +..||.++++.+|+++|++.| |+|++++........ ... ..
T Consensus 1 kIl~i~~~---------~~--~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~------~~~----------~~ 51 (375)
T cd03821 1 KILHVIPS---------FD--PKYGGPVRVVLNLSKALAKLG--HEVTVATTDAGGDPL------LVA----------LN 51 (375)
T ss_pred CeEEEcCC---------CC--cccCCeehHHHHHHHHHHhcC--CcEEEEecCCCCccc------hhh----------cc
Confidence 68899866 33 678999999999999999999 999999876432110 000 00
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC--ChHHHHHHHHccCCC
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYA--DAGEVAAHLSGALNV 328 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~--~~~~~a~~l~~~~~i 328 (1024)
......... .. ..... ..+.. +. .. +...+.. ...+||+||+|.. .....+..+.+..++
T Consensus 52 ~~~~~~~~~-~~-~~~~~-~~~~~---~~-----~~--~~~~~~~-----~~~~~dii~~~~~~~~~~~~~~~~~~~~~~ 113 (375)
T cd03821 52 GVPVKLFSI-NV-AYGLN-LARYL---FP-----PS--LLAWLRL-----NIREADIVHVHGLWSYPSLAAARAARKYGI 113 (375)
T ss_pred Cceeeeccc-ch-hhhhh-hhhhc---cC-----hh--HHHHHHH-----hCCCCCEEEEecccchHHHHHHHHHHHhCC
Confidence 100000000 00 00000 00000 00 00 0000000 0147999999973 344555556666799
Q ss_pred CEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhh
Q 001705 329 PMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRR 408 (1024)
Q Consensus 329 piV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~ 408 (1024)
|++++.|+....... .... ..........+...+..++.+++++......+...+
T Consensus 114 ~~i~~~~~~~~~~~~-------~~~~---~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~--------------- 168 (375)
T cd03821 114 PYVVSPHGMLDPWAL-------PHKA---LKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRRLG--------------- 168 (375)
T ss_pred CEEEEcccccccccc-------ccch---hhhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhC---------------
Confidence 999999976332210 0000 111112223356678899999999976665543221
Q ss_pred hcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCC
Q 001705 409 QRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDP 488 (1024)
Q Consensus 409 ~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~ 488 (1024)
+..++.+||||+|.+.+.+... . .....+....++++|+++||+.+
T Consensus 169 ---------~~~~~~vi~~~~~~~~~~~~~~----------------------~---~~~~~~~~~~~~~~i~~~G~~~~ 214 (375)
T cd03821 169 ---------LKAPIAVIPNGVDIPPFAALPS----------------------R---GRRRKFPILPDKRIILFLGRLHP 214 (375)
T ss_pred ---------CcccEEEcCCCcChhccCcchh----------------------h---hhhhhccCCCCCcEEEEEeCcch
Confidence 1138999999999987754431 0 00112223467889999999999
Q ss_pred CCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhh
Q 001705 489 KKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAA 567 (1024)
Q Consensus 489 ~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~ 567 (1024)
.||++.+++|+..+.+ +.+++.+ ++|.++.. ....+..++.++++.++|.|+|+++.+++..+|+.|
T Consensus 215 ~K~~~~li~a~~~l~~--~~~~~~l~i~G~~~~~---------~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a- 282 (375)
T cd03821 215 KKGLDLLIEAFAKLAE--RFPDWHLVIAGPDEGG---------YRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADA- 282 (375)
T ss_pred hcCHHHHHHHHHHhhh--hcCCeEEEEECCCCcc---------hHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhC-
Confidence 9999999999999863 3466666 77765431 234445556888999999999999999999999999
Q ss_pred cCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 001705 568 KTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGL 647 (1024)
Q Consensus 568 ~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~ 647 (1024)
|++|+||..|+||++++||||||+|||+++.||..+++.+ ..|+++++ +.++++++|.+++++++.+++++++++
T Consensus 283 ---dv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~i~~l~~~~~~~~~~~~~~~ 357 (375)
T cd03821 283 ---DLFVLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVDALAAALRRALELPQRLKAMGENGR 357 (375)
T ss_pred ---CEEEeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988 78888865 569999999999999999999999999
Q ss_pred HHH-hcCCHHHHHHHHH
Q 001705 648 KNI-HRFSWPEHCRNYL 663 (1024)
Q Consensus 648 ~~~-~~fsw~~~a~~~l 663 (1024)
+.+ ++|||+..+++|+
T Consensus 358 ~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 358 ALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHHhcCHHHHHHHhh
Confidence 996 7999999999886
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-31 Score=308.29 Aligned_cols=372 Identities=16% Similarity=0.176 Sum_probs=253.8
Q ss_pred CCChHHHHHHHHHHHHHcC--CCceEEEEEecCCCCCC-CCc-ccCCCccccCCCCCCCCCCCeEEEEec-CCCCCCccc
Q 001705 193 DTGGQVKYVVELARALANT--EGVYRVDLLTRQIASPE-VDS-SYGEPNEMLSCPSDGTGSCGAYIIRIP-CGARDKYIA 267 (1024)
Q Consensus 193 ~~GG~~~~v~~La~aLa~~--g~v~~V~vlt~~~~~p~-~~~-~y~~~~e~l~~~~~~~~~~gv~i~rip-~~~~~~~~~ 267 (1024)
..||.++.+++.+.+|.+. + |+|+|+|....... ... .....++ .+..+++.++++. .+ .++
T Consensus 12 ~ggg~ervl~~a~~~l~~~~~~--~~v~i~t~~~~~~~~~~l~~~~~~f~-------~~~~~~~~~~~~~~~~---~~~- 78 (419)
T cd03806 12 AGGGGERVLWCAVRALQKRYPN--NIVVIYTGDLDATPEEILEKVESRFN-------IELDRPRIVFFLLKYR---KLV- 78 (419)
T ss_pred CCCCchHHHHHHHHHHHHhCCC--cEEEEECCCCCCCHHHHHHHHHHhcC-------eecCCCceEEEEecce---eee-
Confidence 3569999999999999998 6 99999999853211 000 0000010 0233577766663 21 222
Q ss_pred cccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcC-CCh-HHHHHHHHccCCCCEEEEeCCCch----hh
Q 001705 268 KESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHY-ADA-GEVAAHLSGALNVPMVLTGHSLGR----NK 341 (1024)
Q Consensus 268 k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~-~~~-~~~a~~l~~~~~ipiV~t~H~l~~----~~ 341 (1024)
....|+.+..+.+.+......+. .+.. .+||||..|. +.. ..++.++. ++|+|+.+| ++ +.
T Consensus 79 ~~~~~~r~~~~~~~~~~~~~~~~-~~~~-------~~pDv~i~~~g~~~~~~~~~~~~---~~~~i~y~h--~P~~~~d~ 145 (419)
T cd03806 79 EASTYPRFTLLGQALGSMILGLE-ALLK-------LVPDIFIDTMGYPFTYPLVRLLG---GCPVGAYVH--YPTISTDM 145 (419)
T ss_pred ccccCCceeeHHHHHHHHHHHHH-HHHh-------cCCCEEEEcCCcccHHHHHHHhc---CCeEEEEec--CCcchHHH
Confidence 23467776555444433333222 1111 3699988775 333 33333223 789999999 34 33
Q ss_pred hHHHHhcCC--------CCc-c----hhh-HHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHh
Q 001705 342 FEQLLKQGR--------LPK-D----INA-SYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVR 407 (1024)
Q Consensus 342 ~~~l~~~g~--------~~~-~----i~~-~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~ 407 (1024)
+..+ ..+. ..+ . +.. .|+++.. .|+..++.||.|+++|+...+.+...+..
T Consensus 146 l~~~-~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~--~~~~~~~~aD~ii~~S~~~~~~~~~~~~~------------ 210 (419)
T cd03806 146 LQKV-RSREASYNNSATIARSPVLSKAKLLYYRLFAF--LYGLAGSFADVVMVNSTWTRNHIRSLWKR------------ 210 (419)
T ss_pred HHHH-hhccccccCccchhccchHHHHHHHHHHHHHH--HHHHHhhcCCEEEECCHHHHHHHHHHhCc------------
Confidence 3221 1111 000 1 111 1122222 47888999999999998777765443321
Q ss_pred hhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCC
Q 001705 408 RQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPD 487 (1024)
Q Consensus 408 ~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld 487 (1024)
..++.|||||+|.+.|.+... ....++++|+++||+.
T Consensus 211 -----------~~~~~vi~~gvd~~~~~~~~~--------------------------------~~~~~~~~il~vgr~~ 247 (419)
T cd03806 211 -----------NTKPSIVYPPCDVEELLKLPL--------------------------------DEKTRENQILSIAQFR 247 (419)
T ss_pred -----------CCCcEEEcCCCCHHHhccccc--------------------------------ccccCCcEEEEEEeec
Confidence 027899999999877643320 0124567999999999
Q ss_pred CCCCHHHHHHHHhhccccCCC---CcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHH
Q 001705 488 PKKNVTTLLKAFGECQPLREL---ANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIY 563 (1024)
Q Consensus 488 ~~Kgi~~ll~A~~~l~~l~~~---~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly 563 (1024)
+.||++.+++||..+.+..+. +++.| |+|++.. .+..++..+++++++++++.++|.|+|.++.+++..+|
T Consensus 248 ~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~-----~~~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~~l~~~l 322 (419)
T cd03806 248 PEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRN-----EDDEKRVEDLKLLAKELGLEDKVEFVVNAPFEELLEEL 322 (419)
T ss_pred CCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCC-----cccHHHHHHHHHHHHHhCCCCeEEEecCCCHHHHHHHH
Confidence 999999999999998642222 34665 6776543 22345778899999999999999999999999999999
Q ss_pred HHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc-hhhhc---cCCcEEEeCCCCHHHHHHHHHHHHhCHHHH
Q 001705 564 RLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP-VDILK---ALNNGLLVDPHDQNAIADALLKLLADKNMW 639 (1024)
Q Consensus 564 ~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~-~eii~---~~~~Gllv~p~d~~~la~aI~~ll~d~~~~ 639 (1024)
+.| |++|+|+..|+||++++||||||+|||+++.||+ .|++. ++.+|++++ |++++|++|.+++++++..
T Consensus 323 ~~a----dv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~ 396 (419)
T cd03806 323 STA----SIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEE 396 (419)
T ss_pred HhC----eEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHH
Confidence 999 9999999999999999999999999999999886 57887 789999985 9999999999999976554
Q ss_pred HHHHHHHHHHH-hcCCHHHHH
Q 001705 640 SECRKNGLKNI-HRFSWPEHC 659 (1024)
Q Consensus 640 ~~~~~~~~~~~-~~fsw~~~a 659 (1024)
+++..++++.+ ++|||+...
T Consensus 397 ~~~~~~~~~~~~~~fs~~~f~ 417 (419)
T cd03806 397 RLRIRRAARSSVKRFSDEEFE 417 (419)
T ss_pred HHHHHHHHHHHHHhhCHHHhc
Confidence 44445555555 799999764
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-31 Score=300.35 Aligned_cols=385 Identities=22% Similarity=0.283 Sum_probs=271.0
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++|+.. ++ +..||.+.++..|+++|+++| |+|++++.....+.......... ...+
T Consensus 1 kIl~i~~~---------~~--~~~~G~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~~~~~~~~~~---------~~~~ 58 (394)
T cd03794 1 KILILSQY---------FP--PELGGGAFRTTELAEELVKRG--HEVTVITGSPNYPSGKIYKGYKR---------EEVD 58 (394)
T ss_pred CEEEEecc---------cC--CccCCcceeHHHHHHHHHhCC--ceEEEEecCCCcccccccccceE---------EecC
Confidence 68999966 33 445899999999999999999 99999998654332110000000 1235
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC--ChHHHHHHHHccCCC
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYA--DAGEVAAHLSGALNV 328 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~--~~~~~a~~l~~~~~i 328 (1024)
++.+++++..... ....+..+..+.... ......+.. ...+||+||+|.+ .....+..+++..++
T Consensus 59 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~----~~~~~~~~~-----~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~ 125 (394)
T cd03794 59 GVRVHRVPLPPYK----KNGLLKRLLNYLSFA----LSALLALLK-----RRRRPDVIIATSPPLLIALAALLLARLKGA 125 (394)
T ss_pred CeEEEEEecCCCC----ccchHHHHHhhhHHH----HHHHHHHHh-----cccCCCEEEEcCChHHHHHHHHHHHHhcCC
Confidence 8888888864331 100101011111111 111111110 1257999999973 345555666666799
Q ss_pred CEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhh
Q 001705 329 PMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRR 408 (1024)
Q Consensus 329 piV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~ 408 (1024)
|++++.|++++...... +.... ....+.+.+.+ ++..++.+|.|+++|+...+.+.. +
T Consensus 126 ~~i~~~h~~~~~~~~~~---~~~~~-~~~~~~~~~~~--~~~~~~~~d~vi~~s~~~~~~~~~-~--------------- 183 (394)
T cd03794 126 PFVLEVRDLWPESAVAL---GLLKN-GSLLYRLLRKL--ERLIYRRADAIVVISPGMREYLVR-R--------------- 183 (394)
T ss_pred CEEEEehhhcchhHHHc---cCccc-cchHHHHHHHH--HHHHHhcCCEEEEECHHHHHHHHh-c---------------
Confidence 99999999866544322 11111 11112333333 677899999999999988776431 1
Q ss_pred hcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCC
Q 001705 409 QRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDP 488 (1024)
Q Consensus 409 ~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~ 488 (1024)
+....++.++|||+|...+.+... +. ...+.....+++.|+++|++.+
T Consensus 184 -------~~~~~~~~~i~~~~~~~~~~~~~~----------------------~~---~~~~~~~~~~~~~i~~~G~~~~ 231 (394)
T cd03794 184 -------GVPPEKISVIPNGVDLELFKPPPA----------------------DE---SLRKELGLDDKFVVLYAGNIGR 231 (394)
T ss_pred -------CCCcCceEEcCCCCCHHHcCCccc----------------------hh---hhhhccCCCCcEEEEEecCccc
Confidence 112238999999999877654431 00 0112223456789999999999
Q ss_pred CCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhh
Q 001705 489 KKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAA 567 (1024)
Q Consensus 489 ~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~ 567 (1024)
.||++.+++|+..+.+. +++.+ ++|+++.. ..+.+.+...++ ++|.|.|+++.+++.++|+.|
T Consensus 232 ~k~~~~l~~~~~~l~~~---~~~~l~i~G~~~~~-----------~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~~- 295 (394)
T cd03794 232 AQGLDTLLEAAALLKDR---PDIRFLIVGDGPEK-----------EELKELAKALGL-DNVTFLGRVPKEELPELLAAA- 295 (394)
T ss_pred ccCHHHHHHHHHHHhhc---CCeEEEEeCCcccH-----------HHHHHHHHHcCC-CcEEEeCCCChHHHHHHHHhh-
Confidence 99999999999998542 56666 77877642 334444555555 579999999999999999999
Q ss_pred cCCcEEEecCCCCCC-----CHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHH
Q 001705 568 KTKGVFINPALVEPF-----GLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSEC 642 (1024)
Q Consensus 568 ~~~dv~v~ps~~Egf-----gl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~ 642 (1024)
|++++|+..|++ |++++|||+||+|||+++.|+..+++.++.+|+++++.|+++++++|.+++.+++.++++
T Consensus 296 ---di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 372 (394)
T cd03794 296 ---DVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDPEERAEM 372 (394)
T ss_pred ---CeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhChHHHHHH
Confidence 999999998876 788999999999999999999999999888999999999999999999999999999999
Q ss_pred HHHHHHHH-hcCCHHHHHHHHH
Q 001705 643 RKNGLKNI-HRFSWPEHCRNYL 663 (1024)
Q Consensus 643 ~~~~~~~~-~~fsw~~~a~~~l 663 (1024)
++++++.+ ++|||+.++++|+
T Consensus 373 ~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 373 GENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHhhcHHHHHHhcC
Confidence 99999999 5999999998873
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-31 Score=300.33 Aligned_cols=345 Identities=21% Similarity=0.271 Sum_probs=254.7
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++++.+ +| +|.+.++++++++|.++| |+|+|+|.......... .
T Consensus 1 ki~~~~~~---------~~-----~~~~~~~~~~~~~L~~~g--~~v~v~~~~~~~~~~~~------~------------ 46 (355)
T cd03799 1 KIAYLVKE---------FP-----RLSETFILREILALEAAG--HEVEIFSLRPPEDTLVH------P------------ 46 (355)
T ss_pred CEEEECCC---------CC-----CcchHHHHHHHHHHHhCC--CeEEEEEecCccccccc------c------------
Confidence 69999977 44 236789999999999999 99999997632111000 0
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC-hHHHHHHHHccCCCC
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYAD-AGEVAAHLSGALNVP 329 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~-~~~~a~~l~~~~~ip 329 (1024)
. ....+. .. .+. ...|. .......+.+.+.+ .+||+||+|+.. ...++.+.++..++|
T Consensus 47 ~--~~~~~~-~~-~~~--------~~~~~--~~~~~~~~~~~~~~-------~~~Dii~~~~~~~~~~~~~~~~~~~~~~ 105 (355)
T cd03799 47 E--DRAELA-RT-RYL--------ARSLA--LLAQALVLARELRR-------LGIDHIHAHFGTTPATVAMLASRLGGIP 105 (355)
T ss_pred c--cccccc-ch-HHH--------HHHHH--HHHHHHHHHHHHHh-------cCCCEEEECCCCchHHHHHHHHHhcCCC
Confidence 0 000000 00 111 00111 01111122222222 479999999874 444455555555899
Q ss_pred EEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh
Q 001705 330 MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409 (1024)
Q Consensus 330 iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~ 409 (1024)
++++.|+..... .... ..++..++.+|.+++.|+...+.+...+.
T Consensus 106 ~~~~~~~~~~~~------------~~~~--------~~~~~~~~~~~~vi~~s~~~~~~l~~~~~--------------- 150 (355)
T cd03799 106 YSFTAHGKDIFR------------SPDA--------IDLDEKLARADFVVAISEYNRQQLIRLLG--------------- 150 (355)
T ss_pred EEEEEecccccc------------cCch--------HHHHHHHhhCCEEEECCHHHHHHHHHhcC---------------
Confidence 999999642110 0000 12455688999999999988887655431
Q ss_pred cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCC
Q 001705 410 RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPK 489 (1024)
Q Consensus 410 ~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~ 489 (1024)
....++.++|||+|.+.+.+... ....+++.|+++|++.+.
T Consensus 151 -------~~~~~~~vi~~~~d~~~~~~~~~--------------------------------~~~~~~~~i~~~g~~~~~ 191 (355)
T cd03799 151 -------CDPDKIHVVHCGVDLERFPPRPP--------------------------------PPPGEPLRILSVGRLVEK 191 (355)
T ss_pred -------CCcccEEEEeCCcCHHHcCCccc--------------------------------cccCCCeEEEEEeeeccc
Confidence 12238999999999877643320 012456789999999999
Q ss_pred CCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhc
Q 001705 490 KNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 568 (1024)
Q Consensus 490 Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~ 568 (1024)
||++.+++++..+.. ..+++.+ ++|.++. ...+...+.++++.++|.|.|+++.+++..+|+.|
T Consensus 192 k~~~~l~~~~~~l~~--~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~a-- 256 (355)
T cd03799 192 KGLDYLLEALALLKD--RGIDFRLDIVGDGPL-----------RDELEALIAELGLEDRVTLLGAKSQEEVRELLRAA-- 256 (355)
T ss_pred cCHHHHHHHHHHHhh--cCCCeEEEEEECCcc-----------HHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhC--
Confidence 999999999999853 3466776 7787764 34566778888898999999999999999999999
Q ss_pred CCcEEEecCCC------CCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHH
Q 001705 569 TKGVFINPALV------EPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSEC 642 (1024)
Q Consensus 569 ~~dv~v~ps~~------Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~ 642 (1024)
|++++|+.. |+||++++||||||+|||+++.|+..+++.++.+|+++++.|+++++++|.+++++++.+.++
T Consensus 257 --di~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 334 (355)
T cd03799 257 --DLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDPELRREM 334 (355)
T ss_pred --CEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHH
Confidence 999999998 999999999999999999999999999999988999999999999999999999999999999
Q ss_pred HHHHHHHH-hcCCHHHHHHH
Q 001705 643 RKNGLKNI-HRFSWPEHCRN 661 (1024)
Q Consensus 643 ~~~~~~~~-~~fsw~~~a~~ 661 (1024)
++++++.+ ++|||+..+++
T Consensus 335 ~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 335 GEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred HHHHHHHHHHhcCHHHHhhc
Confidence 99999998 69999998865
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-31 Score=305.71 Aligned_cols=347 Identities=16% Similarity=0.202 Sum_probs=245.3
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcC--CCceEEEEEecCCCCCCCCcccCCCccccCCCCCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANT--EGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGT 247 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~--g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~ 247 (1024)
|||++++.. + +..||+++++.+|+++|.+. | ++|.++++..... ...+
T Consensus 1 mkI~~~~~~---------~---~~~GG~e~~~~~l~~~L~~~~~g--~~v~v~~~~~~~~---------~~~~------- 50 (359)
T PRK09922 1 MKIAFIGEA---------V---SGFGGMETVISNVINTFEESKIN--CEMFFFCRNDKMD---------KAWL------- 50 (359)
T ss_pred CeeEEeccc---------c---cCCCchhHHHHHHHHHhhhcCcc--eeEEEEecCCCCC---------hHHH-------
Confidence 899999865 2 34699999999999999999 7 9999998753210 0000
Q ss_pred CCCCeEE-EEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccC
Q 001705 248 GSCGAYI-IRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGAL 326 (1024)
Q Consensus 248 ~~~gv~i-~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~ 326 (1024)
..+.+ ..++..+. .. ++ . ..+...+.+.+.+ .+||+||+|......++.++++..
T Consensus 51 --~~~~~~~~~~~~~~-~~-----~~----~-----~~~~~~l~~~l~~-------~~~Dii~~~~~~~~~~~~~~~~~~ 106 (359)
T PRK09922 51 --KEIKYAQSFSNIKL-SF-----LR----R-----AKHVYNFSKWLKE-------TQPDIVICIDVISCLYANKARKKS 106 (359)
T ss_pred --Hhcchhcccccchh-hh-----hc----c-----cHHHHHHHHHHHh-------cCCCEEEEcCHHHHHHHHHHHHHh
Confidence 01110 01110000 00 00 0 0111222233322 579999999876666667666666
Q ss_pred CCC--EEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHH
Q 001705 327 NVP--MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKL 404 (1024)
Q Consensus 327 ~ip--iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l 404 (1024)
++| ++.+.|...... ..+. ...+..+|.+++.|+...+.+... +..
T Consensus 107 ~~~~~~~~~~h~~~~~~---------------~~~~--------~~~~~~~d~~i~~S~~~~~~~~~~--~~~------- 154 (359)
T PRK09922 107 GKQFKIFSWPHFSLDHK---------------KHAE--------CKKITCADYHLAISSGIKEQMMAR--GIS------- 154 (359)
T ss_pred CCCCeEEEEecCccccc---------------chhh--------hhhhhcCCEEEEcCHHHHHHHHHc--CCC-------
Confidence 654 566667421100 0000 011368999999998776665331 111
Q ss_pred HHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEe
Q 001705 405 RVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALS 484 (1024)
Q Consensus 405 ~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vg 484 (1024)
..++.+||||+|.+.+.... + ...+++.|+++|
T Consensus 155 --------------~~ki~vi~N~id~~~~~~~~-----------------------~----------~~~~~~~i~~~G 187 (359)
T PRK09922 155 --------------AQRISVIYNPVEIKTIIIPP-----------------------P----------ERDKPAVFLYVG 187 (359)
T ss_pred --------------HHHEEEEcCCCCHHHccCCC-----------------------c----------ccCCCcEEEEEE
Confidence 12899999999965442111 0 013467899999
Q ss_pred CCC--CCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCC--CCH
Q 001705 485 RPD--PKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQ--SDV 559 (1024)
Q Consensus 485 Rld--~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~--~el 559 (1024)
|+. +.||+..+++|+..+. + ++.+ ++|++++ ...+.++++++++.++|.|+|+++. +++
T Consensus 188 rl~~~~~k~~~~l~~a~~~~~---~--~~~l~ivG~g~~-----------~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~ 251 (359)
T PRK09922 188 RLKFEGQKNVKELFDGLSQTT---G--EWQLHIIGDGSD-----------FEKCKAYSRELGIEQRIIWHGWQSQPWEVV 251 (359)
T ss_pred EEecccCcCHHHHHHHHHhhC---C--CeEEEEEeCCcc-----------HHHHHHHHHHcCCCCeEEEecccCCcHHHH
Confidence 986 4599999999998873 2 4554 7888865 3456788899999999999999754 678
Q ss_pred HHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcC-CCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHH
Q 001705 560 PDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATK-NGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNM 638 (1024)
Q Consensus 560 ~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~-~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~ 638 (1024)
.++|+.| |++|+||.+||||++++||||||+|||+|+ .||+.|++.++.+|++++|+|+++++++|.+++++++.
T Consensus 252 ~~~~~~~----d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~~ 327 (359)
T PRK09922 252 QQKIKNV----SALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEVK 327 (359)
T ss_pred HHHHhcC----cEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCccc
Confidence 9999999 999999999999999999999999999999 89999999999999999999999999999999999975
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 001705 639 WSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRN 671 (1024)
Q Consensus 639 ~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~ 671 (1024)
+ ......+.+.+|+-+..++++...|..+++
T Consensus 328 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
T PRK09922 328 Y--QHDAIPNSIERFYEVLYFKNLNNALFSKLQ 358 (359)
T ss_pred C--CHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 4 233334445789999999999999987764
|
|
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-30 Score=297.75 Aligned_cols=371 Identities=23% Similarity=0.327 Sum_probs=262.9
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++++.. ++ |..||.+.++.+++++|++.| |+|++++....+..... ...
T Consensus 1 kil~~~~~---------~~--p~~~G~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~~----------------~~~ 51 (374)
T cd03817 1 KIGIFTDT---------YL--PQVNGVATSIRRLAEELEKRG--HEVYVVAPSYPGAPEEE----------------EVV 51 (374)
T ss_pred CeeEeehh---------cc--CCCCCeehHHHHHHHHHHHcC--CeEEEEeCCCCCCCccc----------------ccc
Confidence 58888865 33 789999999999999999999 99999988643221100 000
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC-ChHHHHHHHHccCCCC
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYA-DAGEVAAHLSGALNVP 329 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~-~~~~~a~~l~~~~~ip 329 (1024)
+....+.+.. . .....+.+ .+. ..+...+.+ .+||+||+|+. ..+..+..+++..++|
T Consensus 52 ~~~~~~~~~~---~--~~~~~~~~--~~~-------~~~~~~~~~-------~~~Div~~~~~~~~~~~~~~~~~~~~~~ 110 (374)
T cd03817 52 VVRPFRVPTF---K--YPDFRLPL--PIP-------RALIIILKE-------LGPDIVHTHTPFSLGLLGLRVARKLGIP 110 (374)
T ss_pred cccccccccc---h--hhhhhccc--cHH-------HHHHHHHhh-------cCCCEEEECCchhhhhHHHHHHHHcCCC
Confidence 1111111100 0 00000000 010 111111111 57999999986 3455666777788999
Q ss_pred EEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh
Q 001705 330 MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409 (1024)
Q Consensus 330 iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~ 409 (1024)
++++.|+.......... .+.. ... .... ...++..+..||.|++.|....+.+.....
T Consensus 111 ~i~~~~~~~~~~~~~~~-~~~~---~~~--~~~~-~~~~~~~~~~~d~i~~~s~~~~~~~~~~~~--------------- 168 (374)
T cd03817 111 VVATYHTMYEDYTHYVP-LGRL---LAR--AVVR-RKLSRRFYNRCDAVIAPSEKIADLLREYGV--------------- 168 (374)
T ss_pred EEEEecCCHHHHHHHHh-cccc---hhH--HHHH-HHHHHHHhhhCCEEEeccHHHHHHHHhcCC---------------
Confidence 99999987553322221 1111 100 0111 034677889999999999876665433211
Q ss_pred cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCC
Q 001705 410 RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPK 489 (1024)
Q Consensus 410 ~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~ 489 (1024)
..++.++|+|+|...+.+... ......+...++++.|+++|++.+.
T Consensus 169 ---------~~~~~vi~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~i~~~G~~~~~ 214 (374)
T cd03817 169 ---------KRPIEVIPTGIDLDRFEPVDG-------------------------DDERRKLGIPEDEPVLLYVGRLAKE 214 (374)
T ss_pred ---------CCceEEcCCccchhccCccch-------------------------hHHHHhcCCCCCCeEEEEEeeeecc
Confidence 026899999999887754431 0011222334567899999999999
Q ss_pred CCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhc
Q 001705 490 KNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 568 (1024)
Q Consensus 490 Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~ 568 (1024)
||++.+++++..+.. ..+++.+ ++|+++. ...+..+++++++.++|.|+|+++.+++..+|+.|
T Consensus 215 k~~~~l~~~~~~~~~--~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a-- 279 (374)
T cd03817 215 KNIDFLIRAFARLLK--EEPDVKLVIVGDGPE-----------REELEELARELGLADRVIFTGFVPREELPDYYKAA-- 279 (374)
T ss_pred cCHHHHHHHHHHHHH--hCCCeEEEEEeCCch-----------HHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHc--
Confidence 999999999999853 3466666 6777653 34566778888999999999999999999999999
Q ss_pred CCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 001705 569 TKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLK 648 (1024)
Q Consensus 569 ~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~ 648 (1024)
|++++|+..|+||++++|||+||+|||+++.|+..+++.++.+|+++++.+. +++++|.+++++++.++++++++++
T Consensus 280 --d~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~~~~~~~~~~~~ 356 (374)
T cd03817 280 --DLFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPELRRRLSKNAEE 356 (374)
T ss_pred --CEEEecccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998888 9999999999999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHHHH
Q 001705 649 NIHRFSWPEHCRNYLSHVEH 668 (1024)
Q Consensus 649 ~~~~fsw~~~a~~~l~~~~~ 668 (1024)
.+++++ +++++.+.|++
T Consensus 357 ~~~~~~---~~~~~~~~~~~ 373 (374)
T cd03817 357 SAEKFS---FAKKVEKLYEE 373 (374)
T ss_pred HHHHHH---HHHHHHHHHhc
Confidence 997666 55555555543
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-31 Score=307.75 Aligned_cols=364 Identities=13% Similarity=0.153 Sum_probs=230.0
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGS 249 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~ 249 (1024)
||||+|+.. ++ .||+++.+.+|++.|.+.| |+|+++......+... ...
T Consensus 1 mkil~i~~~---------l~----~GGaeri~~~L~~~l~~~G--~~~~i~~~~~~~~~~~----------------~~~ 49 (405)
T PRK10125 1 MNILQFNVR---------LA----EGGAAGVALDLHQRALQQG--LASHFVYGYGKGGKES----------------VSH 49 (405)
T ss_pred CeEEEEEee---------ec----CCchhHHHHHHHHHHHhcC--CeEEEEEecCCCcccc----------------ccc
Confidence 899999965 34 6999999999999999999 9999988763322200 000
Q ss_pred CCe-EEEEecCCCCCCccccccCCcchHHH-----HHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHH-----
Q 001705 250 CGA-YIIRIPCGARDKYIAKESLWPYIHEF-----VDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEV----- 318 (1024)
Q Consensus 250 ~gv-~i~rip~~~~~~~~~k~~lwp~~~~f-----~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~----- 318 (1024)
..+ .++++ +++ .--+++-+ -...+.......+.+.+ .++|||||.|..+.+++
T Consensus 50 ~~~~~~~~~--~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~------~~~pDviHlH~~~~~~~~~~~l 113 (405)
T PRK10125 50 QNYPQVIKH--TPR--------MTAMANIALFRLFNRDLFGNFNELYRTITR------TPGPVVLHFHVLHSYWLNLKSV 113 (405)
T ss_pred CCcceEEEe--ccc--------HHHHHHHHHHHhcchhhcchHHHHHHHHhh------ccCCCEEEEecccCceecHHHH
Confidence 111 11111 111 00001111 00111111222222211 26899999998754322
Q ss_pred HHH----HHccCCCCEEEEeCCCchh-----------hhHHHHhcCC----CCc-chhhHHHHH-HHHHHHHHhhhcCCE
Q 001705 319 AAH----LSGALNVPMVLTGHSLGRN-----------KFEQLLKQGR----LPK-DINASYKIM-RRIEAEELGLDASEM 377 (1024)
Q Consensus 319 a~~----l~~~~~ipiV~t~H~l~~~-----------~~~~l~~~g~----~~~-~i~~~y~~~-r~i~~e~~~l~~Ad~ 377 (1024)
..+ ..+..++|+|+|+|+.+.- ++..-...-. .+. ......+.+ ++...-..+++.++.
T Consensus 114 ~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d~~~~~~~~k~~~~~~~~~~~~~ 193 (405)
T PRK10125 114 VRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVDRAHQLVAGKRQLFREMLALGCQ 193 (405)
T ss_pred HHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccchHHHHHHHHHHHHHHHhhcCcE
Confidence 111 1234579999999998743 1111010000 000 011111111 111111233456789
Q ss_pred EEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccc
Q 001705 378 VVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQS 457 (1024)
Q Consensus 378 Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~ 457 (1024)
+|+.|+...+.+...+.. .++.|||||||++.+.+...
T Consensus 194 iV~~S~~l~~~~~~~~~~------------------------~~i~vI~NGid~~~~~~~~~------------------ 231 (405)
T PRK10125 194 FISPSQHVADAFNSLYGP------------------------GRCRIINNGIDMATEAILAE------------------ 231 (405)
T ss_pred EEEcCHHHHHHHHHHcCC------------------------CCEEEeCCCcCccccccccc------------------
Confidence 999998777764433221 28999999999754322110
Q ss_pred cCCCCcchHHHhhhhCCCCCcEEEEEeCC--CCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHH
Q 001705 458 KRNLPPMWSEVMRFFTNPHKPTILALSRP--DPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTT 534 (1024)
Q Consensus 458 ~~~~p~~~~~~~~~~~~~~~~~Il~vgRl--d~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~ 534 (1024)
.... ...+++++|+++|+. ++.||++.+++|+..+. +++.| ++|.++...
T Consensus 232 -~~~~---------~~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~-----~~~~L~ivG~g~~~~------------ 284 (405)
T PRK10125 232 -LPPV---------RETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG-----DKIELHTFGKFSPFT------------ 284 (405)
T ss_pred -cccc---------ccCCCCCEEEEEEeccccCCccHHHHHHHHHhCC-----CCeEEEEEcCCCccc------------
Confidence 0000 012567899999994 47899999999999873 34555 678764210
Q ss_pred HHHHHHHcCCCCCEEeCCCC-CCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCc
Q 001705 535 VLKLIDKYDLYGQVAYPKHH-KQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNN 613 (1024)
Q Consensus 535 i~~~i~~~~l~~~V~~~g~~-~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~ 613 (1024)
...|.++|+. +.+++.++|+.| |+||+||.+|+||++++||||||+|||+|+.||.+|++.+. +
T Consensus 285 ----------~~~v~~~g~~~~~~~l~~~y~~a----DvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~ 349 (405)
T PRK10125 285 ----------AGNVVNHGFETDKRKLMSALNQM----DALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS-G 349 (405)
T ss_pred ----------ccceEEecCcCCHHHHHHHHHhC----CEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-c
Confidence 1357788875 446899999999 99999999999999999999999999999999999999764 8
Q ss_pred EEEeCCCCHHHHHHHHHHHHhCHHHHHH----HHHHHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001705 614 GLLVDPHDQNAIADALLKLLADKNMWSE----CRKNGLKNI-HRFSWPEHCRNYLSHVEHS 669 (1024)
Q Consensus 614 Gllv~p~d~~~la~aI~~ll~d~~~~~~----~~~~~~~~~-~~fsw~~~a~~~l~~~~~~ 669 (1024)
|++|+|.|++++|+++ +++..++ ...++++.+ ++|||+.++++|+++|+++
T Consensus 350 G~lv~~~d~~~La~~~-----~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 350 GKTVSEEEVLQLAQLS-----KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred EEEECCCCHHHHHhcc-----CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 9999999999999864 3333332 234577776 6899999999999999753
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-32 Score=294.01 Aligned_cols=243 Identities=18% Similarity=0.260 Sum_probs=196.3
Q ss_pred EEEEEecCCCCCC---CchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEE
Q 001705 750 IVIAADCYDSDGN---TTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELY 826 (1024)
Q Consensus 750 llIa~DlDGTl~~---~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~ 826 (1024)
++|++|+||||++ .+..+++.+.++++++.++ |+.|++||||++.+++.++.++++ ..|+++||+||+.|+
T Consensus 2 ~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~----gi~fv~aTGR~~~~~~~~~~~~~~--~~p~~~I~~NGa~I~ 75 (249)
T TIGR01485 2 LLLVSDLDNTLVDHTDGDNQALLRLNALLEDHRGE----DSLLVYSTGRSPHSYKELQKQKPL--LTPDIWVTSVGSEIY 75 (249)
T ss_pred eEEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhcc----CceEEEEcCCCHHHHHHHHhcCCC--CCCCEEEEcCCceEE
Confidence 3778999999886 6678999999999999987 999999999999999999998887 458899999999999
Q ss_pred cCCCccccCcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCC
Q 001705 827 FPWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGF 906 (1024)
Q Consensus 827 ~~~~~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~ 906 (1024)
++ +....+..|...+...|..+.+......+.. +..+.......+|+++...+........++.+.+...+.
T Consensus 76 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~ 147 (249)
T TIGR01485 76 YG-GAEVPDQHWAEYLSEKWQRDIVVAITDKFEE-------LKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGL 147 (249)
T ss_pred eC-CCCcCCHHHHHHHhcccCHHHHHHHHhcCcc-------cccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCC
Confidence 85 4456788888888888985544444332222 223333345678888876433222235667777776677
Q ss_pred eEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcC-CCceEEecCCCCCChHHHhcc
Q 001705 907 RCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVG-LHKTLILRGSVMYGSEKLLHG 985 (1024)
Q Consensus 907 ~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~-ag~gVaMgna~~NA~~elk~~ 985 (1024)
.+.++.+++. ++||+|+++|||.||++|++++|++++++++| ||+.| | ++||+. ++.+|||+ ||.+++|+.
T Consensus 148 ~~~~~~~~~~-~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~~-GD~~N-D-~~ml~~~~~~~va~~----na~~~~k~~ 219 (249)
T TIGR01485 148 DVKLIYSSGK-DLDILPQGSGKGQALQYLLQKLAMEPSQTLVC-GDSGN-D-IELFEIGSVRGVIVS----NAQEELLQW 219 (249)
T ss_pred CEEEEEECCc-eEEEEeCCCChHHHHHHHHHHcCCCccCEEEE-ECChh-H-HHHHHccCCcEEEEC----CCHHHHHHH
Confidence 7888888886 99999999999999999999999999999998 99999 9 999997 77999999 999999987
Q ss_pred cccCCCCCccCCCCCCeeEeccccChhHHHHHHHhccc
Q 001705 986 EDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAIKI 1023 (1024)
Q Consensus 986 ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~~~ 1023 (1024)
++.. +.+.+ |+|..+.++||+++|++||+
T Consensus 220 ~~~~--------~~~~~-~~~~~~~~~Gi~e~l~~~~~ 248 (249)
T TIGR01485 220 YDEN--------AKDKI-YHASERCAGGIIEAIAHFDL 248 (249)
T ss_pred HHhc--------ccCcE-EEecCCCcHHHHHHHHHcCC
Confidence 6521 12233 58899999999999999986
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-30 Score=303.91 Aligned_cols=391 Identities=15% Similarity=0.128 Sum_probs=254.4
Q ss_pred CceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCC
Q 001705 168 RNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGT 247 (1024)
Q Consensus 168 ~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~ 247 (1024)
++.+|++++.- .+|.+.++++++++|+++| |+|+|+|.....+. .+. .
T Consensus 2 ~~~~~~~~~~~---------------~~~~~~R~~~~a~~L~~~G--~~V~ii~~~~~~~~--------~~~-------~ 49 (415)
T cd03816 2 KRKRVCVLVLG---------------DIGRSPRMQYHALSLAKHG--WKVDLVGYLETPPH--------DEI-------L 49 (415)
T ss_pred CccEEEEEEec---------------ccCCCHHHHHHHHHHHhcC--ceEEEEEecCCCCC--------HHH-------h
Confidence 34577777742 2456677789999999999 99999987632111 010 1
Q ss_pred CCCCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC---hHHHHHHHHc
Q 001705 248 GSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYAD---AGEVAAHLSG 324 (1024)
Q Consensus 248 ~~~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~---~~~~a~~l~~ 324 (1024)
...|+.++.++..+. ...+ .+.+-.+...+......+...+.. . .+||+||+|... ...++.++++
T Consensus 50 ~~~~v~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~l~~---~---~~~Dvi~~~~~~~~~~~~~a~~~~~ 118 (415)
T cd03816 50 SNPNITIHPLPPPPQ--RLNK---LPFLLFAPLKVLWQFFSLLWLLYK---L---RPADYILIQNPPSIPTLLIAWLYCL 118 (415)
T ss_pred cCCCEEEEECCCCcc--cccc---chHHHHHHHHHHHHHHHHHHHHHh---c---CCCCEEEEeCCCCchHHHHHHHHHH
Confidence 235899999876431 0000 111111111111112222221211 1 369999998743 2344555666
Q ss_pred cCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHH
Q 001705 325 ALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKL 404 (1024)
Q Consensus 325 ~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l 404 (1024)
..++|+|++.|+++... ...+... ......+++++ |+.+++.||.|+++|+...+.+.. +
T Consensus 119 ~~~~~~V~~~h~~~~~~----~~~~~~~--~~~~~~~~~~~--e~~~~~~ad~ii~vS~~~~~~l~~-~----------- 178 (415)
T cd03816 119 LRRTKLIIDWHNYGYTI----LALKLGE--NHPLVRLAKWY--EKLFGRLADYNLCVTKAMKEDLQQ-F----------- 178 (415)
T ss_pred HhCCeEEEEcCCchHHH----HhcccCC--CCHHHHHHHHH--HHHHhhcCCEeeecCHHHHHHHHh-h-----------
Confidence 67999999999875321 1111111 11122334444 677889999999999987776543 1
Q ss_pred HHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhh-hCCCCCcEEEEE
Q 001705 405 RVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRF-FTNPHKPTILAL 483 (1024)
Q Consensus 405 ~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~Il~v 483 (1024)
|.+..++.|||||. ...|.|............... . ..+.. ....+. ...++.++++++
T Consensus 179 -----------~~~~~ki~vI~Ng~-~~~f~p~~~~~~~~~~~~~~~----~---~~~~~-~~~~~~~~~~~~~~vi~~~ 238 (415)
T cd03816 179 -----------NNWKIRATVLYDRP-PEQFRPLPLEEKHELFLKLAK----T---FLTRE-LRIGAVQLSEERPALLVSS 238 (415)
T ss_pred -----------hccCCCeeecCCCC-HHHceeCcHHHHHHHHHhccc----c---ccccc-cccccceecCCCceEEEEe
Confidence 11224899999994 455655431000000000000 0 00000 000000 112345678899
Q ss_pred eCCCCCCCHHHHHHHHhhcccc----CCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCC
Q 001705 484 SRPDPKKNVTTLLKAFGECQPL----RELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSD 558 (1024)
Q Consensus 484 gRld~~Kgi~~ll~A~~~l~~l----~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~e 558 (1024)
||+.+.||++.+++|+..+.+. ...|++.| |+|+|+. ..++.++++++++.+.+.+.|+++.++
T Consensus 239 grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~-----------~~~l~~~~~~~~l~~~~~~~g~~~~~~ 307 (415)
T cd03816 239 TSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGPL-----------KEKYLERIKELKLKKVTIRTPWLSAED 307 (415)
T ss_pred ccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCcc-----------HHHHHHHHHHcCCCcEEEEcCcCCHHH
Confidence 9999999999999999998531 12356776 7788764 356778888999987666778999999
Q ss_pred HHHHHHHhhcCCcEEEecC---CCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhC
Q 001705 559 VPDIYRLAAKTKGVFINPA---LVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLAD 635 (1024)
Q Consensus 559 l~~ly~~A~~~~dv~v~ps---~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d 635 (1024)
++.+|+.| |++|.|+ ..|+||++++||||||+|||+|+.||..|++.++.+|++++ |+++++++|.++++|
T Consensus 308 ~~~~l~~a----Dv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~ 381 (415)
T cd03816 308 YPKLLASA----DLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLLSN 381 (415)
T ss_pred HHHHHHhC----CEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHHhc
Confidence 99999999 9998653 34789999999999999999999999999999999999995 899999999999999
Q ss_pred ---HHHHHHHHHHHHHHHhcCCHHHHH
Q 001705 636 ---KNMWSECRKNGLKNIHRFSWPEHC 659 (1024)
Q Consensus 636 ---~~~~~~~~~~~~~~~~~fsw~~~a 659 (1024)
++.+++|++++++.. .++|+.-.
T Consensus 382 ~~~~~~~~~m~~~~~~~~-~~~~~~~~ 407 (415)
T cd03816 382 FPNRGKLNSLKKGAQEES-ELRWDENW 407 (415)
T ss_pred CCCHHHHHHHHHHHHHhh-hcCHHHHH
Confidence 999999999999876 55665443
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=312.54 Aligned_cols=382 Identities=19% Similarity=0.215 Sum_probs=251.5
Q ss_pred EEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCC
Q 001705 172 IVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCG 251 (1024)
Q Consensus 172 Il~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~g 251 (1024)
||+|+.. +|-||+.||.. .+++|+++|++. |+|+|+|......+. .+......+ ...
T Consensus 1 iL~~~~~---------~P~P~~~G~~~-r~~~~~~~L~~~---~~v~l~~~~~~~~~~--~~~~~l~~~--------~~~ 57 (397)
T TIGR03087 1 ILYLVHR---------IPYPPNKGDKI-RSFHLLRHLAAR---HRVHLGTFVDDPEDW--QYAAALRPL--------CEE 57 (397)
T ss_pred CeeecCC---------CCCCCCCCCcE-eHHHHHHHHHhc---CcEEEEEeCCCcccH--HHHHHHHHH--------hhe
Confidence 6788855 56568888855 678999999887 999999986321111 000111111 113
Q ss_pred eEEEEecCCCCCCcccc-ccCC---cchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHH-ccC
Q 001705 252 AYIIRIPCGARDKYIAK-ESLW---PYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLS-GAL 326 (1024)
Q Consensus 252 v~i~rip~~~~~~~~~k-~~lw---p~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~-~~~ 326 (1024)
+.++.++. ...++.. ..++ |+...+ .....+.+.+.+.+.. .++|+||++....+. ++. ...
T Consensus 58 ~~~~~~~~--~~~~~~~~~~l~~~~p~~~~~-----~~~~~~~~~l~~~~~~---~~~D~v~~~~~~~~~---~~~~~~~ 124 (397)
T TIGR03087 58 VCVVPLDP--RVARLRSLLGLLTGEPLSLPY-----YRSRRLARWVNALLAA---EPVDAIVVFSSAMAQ---YVTPHVR 124 (397)
T ss_pred eEEeecCc--HHHHHHHHhhhcCCCCCcchh-----hCCHHHHHHHHHHHhh---CCCCEEEEeccccce---ecccccc
Confidence 33333321 1000000 0000 111000 0112233333343333 479999998753322 222 345
Q ss_pred CCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHH--HHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHH
Q 001705 327 NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKI--MRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKL 404 (1024)
Q Consensus 327 ~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~--~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l 404 (1024)
++|+|++.|++....+.++........ ...|+. ......|+.+++.+|.|++.|+.+.+.+...+..
T Consensus 125 ~~p~i~~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~e~~~~~~ad~vi~~S~~~~~~l~~~~~~--------- 193 (397)
T TIGR03087 125 GVPRIVDFVDVDSDKWLQYARTKRWPL--RWIYRREGRLLLAYERAIAARFDAATFVSRAEAELFRRLAPE--------- 193 (397)
T ss_pred CCCeEeehhhHHHHHHHHHHhccCcch--hHHHHHHHHHHHHHHHHHHhhCCeEEEcCHHHHHHHHHhCCC---------
Confidence 799999999986555544433322211 112221 1122347889999999999999888775443221
Q ss_pred HHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEe
Q 001705 405 RVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALS 484 (1024)
Q Consensus 405 ~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vg 484 (1024)
...++.+||||+|.+.|.+... ...+ ..+++++|+|+|
T Consensus 194 -------------~~~~v~vipngvd~~~f~~~~~-------------------~~~~----------~~~~~~~ilf~G 231 (397)
T TIGR03087 194 -------------AAGRITAFPNGVDADFFSPDRD-------------------YPNP----------YPPGKRVLVFTG 231 (397)
T ss_pred -------------CCCCeEEeecccchhhcCCCcc-------------------ccCC----------CCCCCcEEEEEE
Confidence 1138999999999998865431 0000 124568999999
Q ss_pred CCCCCCCHHHHH----HHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCH
Q 001705 485 RPDPKKNVTTLL----KAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDV 559 (1024)
Q Consensus 485 Rld~~Kgi~~ll----~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el 559 (1024)
|+++.||++.++ +++..+. ...|++.+ |+|+++. .. +.++...++|.|+|+++ ++
T Consensus 232 ~l~~~k~~~~l~~~~~~~~~~l~--~~~p~~~l~ivG~g~~------------~~----~~~l~~~~~V~~~G~v~--~~ 291 (397)
T TIGR03087 232 AMDYWPNIDAVVWFAERVFPAVR--ARRPAAEFYIVGAKPS------------PA----VRALAALPGVTVTGSVA--DV 291 (397)
T ss_pred ecCCccCHHHHHHHHHHHHHHHH--HHCCCcEEEEECCCCh------------HH----HHHhccCCCeEEeeecC--CH
Confidence 999999999988 4555553 23466666 7787763 11 23334456799999975 79
Q ss_pred HHHHHHhhcCCcEEEecCC-CCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHH
Q 001705 560 PDIYRLAAKTKGVFINPAL-VEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNM 638 (1024)
Q Consensus 560 ~~ly~~A~~~~dv~v~ps~-~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~ 638 (1024)
..+|+.| |++|+||. .||||++++||||||+|||+|+.|+. .+....++|+++. .|+++++++|.++++|+++
T Consensus 292 ~~~~~~a----dv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv~-~~~~~la~ai~~ll~~~~~ 365 (397)
T TIGR03087 292 RPYLAHA----AVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLVA-ADPADFAAAILALLANPAE 365 (397)
T ss_pred HHHHHhC----CEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEeC-CCHHHHHHHHHHHHcCHHH
Confidence 9999999 99999997 59999999999999999999997643 3333456799996 8999999999999999999
Q ss_pred HHHHHHHHHHHH-hcCCHHHHHHHHHHHHHH
Q 001705 639 WSECRKNGLKNI-HRFSWPEHCRNYLSHVEH 668 (1024)
Q Consensus 639 ~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~ 668 (1024)
++++++++++.+ ++|||+.+++++.++|..
T Consensus 366 ~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~~ 396 (397)
T TIGR03087 366 REELGQAARRRVLQHYHWPRNLARLDALLEQ 396 (397)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHhcC
Confidence 999999999998 699999999999998863
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-30 Score=297.10 Aligned_cols=355 Identities=21% Similarity=0.242 Sum_probs=249.6
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++|+.. .|..||.++++.+|+++|++.| |+|.+++.....+.... . ....
T Consensus 1 kI~~v~~~------------~~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~~------~--------~~~~ 52 (366)
T cd03822 1 RIALVSPY------------PPRKCGIATFTTDLVNALSARG--PDVLVVSVAALYPSLLY------G--------GEQE 52 (366)
T ss_pred CeEEecCC------------CCCCCcHHHHHHHHHHHhhhcC--CeEEEEEeecccCcccC------C--------Cccc
Confidence 68999865 2458999999999999999999 99999987643221000 0 0000
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC------hHHHHHHHHc
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYAD------AGEVAAHLSG 324 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~------~~~~a~~l~~ 324 (1024)
........ .+ ...... .+.+.. .+||+||++.+. .......+..
T Consensus 53 ~~~~~~~~-------------~~---~~~~~~-------~~~~~~-------~~~dii~~~~~~~~~~~~~~~~~~~~~~ 102 (366)
T cd03822 53 VVRVIVLD-------------NP---LDYRRA-------ARAIRL-------SGPDVVVIQHEYGIFGGEAGLYLLLLLR 102 (366)
T ss_pred ceeeeecC-------------Cc---hhHHHH-------HHHHhh-------cCCCEEEEeeccccccchhhHHHHHHHh
Confidence 11111000 00 000111 111111 479999998742 1222222223
Q ss_pred cCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHH
Q 001705 325 ALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKL 404 (1024)
Q Consensus 325 ~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l 404 (1024)
..++|+|++.|+.... ..... .. ..++..++.+|.|+++|....+.+.... .
T Consensus 103 ~~~~~~i~~~h~~~~~-------------~~~~~---~~--~~~~~~~~~~d~ii~~s~~~~~~~~~~~---~------- 154 (366)
T cd03822 103 GLGIPVVVTLHTVLLH-------------EPRPG---DR--ALLRLLLRRADAVIVMSSELLRALLLRA---Y------- 154 (366)
T ss_pred hcCCCEEEEEecCCcc-------------ccchh---hh--HHHHHHHhcCCEEEEeeHHHHHHHHhhc---C-------
Confidence 4789999999986110 00000 11 1245568899999999744444422111 0
Q ss_pred HHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEe
Q 001705 405 RVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALS 484 (1024)
Q Consensus 405 ~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vg 484 (1024)
..++.+||||+|...+.+... ........+++.|+++|
T Consensus 155 --------------~~~~~~i~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~i~~~G 192 (366)
T cd03822 155 --------------PEKIAVIPHGVPDPPAEPPES----------------------------LKALGGLDGRPVLLTFG 192 (366)
T ss_pred --------------CCcEEEeCCCCcCcccCCchh----------------------------hHhhcCCCCCeEEEEEe
Confidence 128999999999776543220 01122235678999999
Q ss_pred CCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCC-CCCCCHHHH
Q 001705 485 RPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKH-HKQSDVPDI 562 (1024)
Q Consensus 485 Rld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~-~~~~el~~l 562 (1024)
|+.+.||++.+++|+..+.. ..+++.+ ++|.+...... ......+++.++++.++|.|.|. ++.+++..+
T Consensus 193 ~~~~~K~~~~ll~a~~~~~~--~~~~~~l~i~G~~~~~~~~------~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~ 264 (366)
T cd03822 193 LLRPYKGLELLLEALPLLVA--KHPDVRLLVAGETHPDLER------YRGEAYALAERLGLADRVIFINRYLPDEELPEL 264 (366)
T ss_pred eccCCCCHHHHHHHHHHHHh--hCCCeEEEEeccCccchhh------hhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHH
Confidence 99999999999999999853 3466666 77776532211 01111145788899999999977 999999999
Q ss_pred HHHhhcCCcEEEecCCCC--CCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHH
Q 001705 563 YRLAAKTKGVFINPALVE--PFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWS 640 (1024)
Q Consensus 563 y~~A~~~~dv~v~ps~~E--gfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~ 640 (1024)
|+.| |++++|+..| +||++++||||||+|||+++.|+ .+.+.+..+|+++++.|+++++++|.+++++++.+.
T Consensus 265 ~~~a----d~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~~~~~ 339 (366)
T cd03822 265 FSAA----DVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADPELAQ 339 (366)
T ss_pred Hhhc----CEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcChHHHH
Confidence 9999 9999999999 99999999999999999999999 777777889999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHH
Q 001705 641 ECRKNGLKNIHRFSWPEHCRNYLSHV 666 (1024)
Q Consensus 641 ~~~~~~~~~~~~fsw~~~a~~~l~~~ 666 (1024)
++++++++.++.|||+.++++|.++|
T Consensus 340 ~~~~~~~~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 340 ALRARAREYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 99999999996799999999999887
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-31 Score=299.20 Aligned_cols=344 Identities=19% Similarity=0.229 Sum_probs=247.7
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++++.. + ..||.++++.+++++|.+.| |+|++++....... +.... ...
T Consensus 1 kIl~~~~~---------~----~~GG~~~~~~~l~~~L~~~~--~~v~~i~~~~~~~~----~~~~~----------~~~ 51 (358)
T cd03812 1 KILHIVGT---------M----NRGGIETFIMNYYRNLDRSK--IQFDFLVTSKEEGD----YDDEI----------EKL 51 (358)
T ss_pred CEEEEeCC---------C----CCccHHHHHHHHHHhcCccc--eEEEEEEeCCCCcc----hHHHH----------HHc
Confidence 58888854 2 47999999999999999999 99999997632110 00111 123
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCE
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPM 330 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipi 330 (1024)
++.+++++.... .+ ..+.. .+.+.+.+ .+||+||+|......++..+.+..+.|.
T Consensus 52 ~~~~~~~~~~~~-------~~----~~~~~-------~~~~~~~~-------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~ 106 (358)
T cd03812 52 GGKIYYIPARKK-------NP----LKYFK-------KLYKLIKK-------NKYDIVHVHGSSASGFILLAAKKAGVKV 106 (358)
T ss_pred CCeEEEecCCCc-------cH----HHHHH-------HHHHHHhc-------CCCCEEEEeCcchhHHHHHHHhhCCCCe
Confidence 667776553111 01 11111 11222222 4799999999876666666666677775
Q ss_pred -EEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh
Q 001705 331 -VLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409 (1024)
Q Consensus 331 -V~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~ 409 (1024)
+++.|+...... . ...... . ...+...++.++.++++|....+.+... +.
T Consensus 107 ~v~~~~~~~~~~~--------~---~~~~~~-~--~~~~~~~~~~~~~~i~~s~~~~~~~~~~---~~------------ 157 (358)
T cd03812 107 RIAHSHNTSDSHD--------K---KKKILK-Y--KVLRKLINRLATDYLACSEEAGKWLFGK---VK------------ 157 (358)
T ss_pred EEEEecccccccc--------c---cchhhH-H--HHHHHHHHhcCCEEEEcCHHHHHHHHhC---CC------------
Confidence 678887533210 0 000000 0 1224556889999999998877765332 11
Q ss_pred cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCC
Q 001705 410 RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPK 489 (1024)
Q Consensus 410 ~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~ 489 (1024)
..++.+||||+|...+.+... . ..........++++.|+++||+.+.
T Consensus 158 ---------~~~~~vi~ngvd~~~~~~~~~----------------------~--~~~~~~~~~~~~~~~i~~vGr~~~~ 204 (358)
T cd03812 158 ---------NKKFKVIPNGIDLEKFIFNEE----------------------I--RKKRRELGILEDKFVIGHVGRFSEQ 204 (358)
T ss_pred ---------cccEEEEeccCcHHHcCCCch----------------------h--hhHHHHcCCCCCCEEEEEEeccccc
Confidence 128999999999987754431 0 0012223334678899999999999
Q ss_pred CCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhc
Q 001705 490 KNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 568 (1024)
Q Consensus 490 Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~ 568 (1024)
||++.+++|+..+. ...+++.+ |+|+++. ...+.+.++++++.++|.|+|+ .+++..+|+.|
T Consensus 205 Kg~~~li~a~~~l~--~~~~~~~l~ivG~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a-- 267 (358)
T cd03812 205 KNHEFLIEIFAELL--KKNPNAKLLLVGDGEL-----------EEEIKKKVKELGLEDKVIFLGV--RNDVPELLQAM-- 267 (358)
T ss_pred cChHHHHHHHHHHH--HhCCCeEEEEEeCCch-----------HHHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhc--
Confidence 99999999999995 34567776 7888764 3556677888999999999998 78999999999
Q ss_pred CCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 001705 569 TKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLK 648 (1024)
Q Consensus 569 ~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~ 648 (1024)
|++|+||..|+||++++||||+|+|||+|+.||..+++.+ ..|++..+.++++++++|.+++++|+.++.++.++..
T Consensus 268 --di~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~~~~~~~~~~~~~~~~ 344 (358)
T cd03812 268 --DVFLFPSLYEGLPLVLIEAQASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILKLKSEDRRERSSESIKKK 344 (358)
T ss_pred --CEEEecccccCCCHHHHHHHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHHHHhCcchhhhhhhhhhc
Confidence 9999999999999999999999999999999999999988 5567776778999999999999999998888777766
Q ss_pred HH
Q 001705 649 NI 650 (1024)
Q Consensus 649 ~~ 650 (1024)
..
T Consensus 345 ~~ 346 (358)
T cd03812 345 GL 346 (358)
T ss_pred cc
Confidence 54
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=310.45 Aligned_cols=245 Identities=18% Similarity=0.245 Sum_probs=194.0
Q ss_pred EEEEEecCCCCCCC--chhhHHHH-HHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEE
Q 001705 750 IVIAADCYDSDGNT--TETFQATI-KNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELY 826 (1024)
Q Consensus 750 llIa~DlDGTl~~~--~~~i~~~~-~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~ 826 (1024)
++|++||||||+++ ++.++... ..+++++.++ |+.|++||||++..+..+++.+++ ..|+++||+||++|+
T Consensus 10 ~lI~sDLDGTLL~~~~~~~~s~~~~~~l~~~~~~~----gi~fv~aTGR~~~~~~~l~~~~~l--~~p~~~I~~nGt~I~ 83 (413)
T PLN02382 10 LMIVSDLDHTMVDHHDPENLSLLRFNALWEAEYRH----DSLLVFSTGRSPTLYKELRKEKPL--LTPDITIMSVGTEIA 83 (413)
T ss_pred EEEEEcCCCcCcCCCCccchhHHHHHHHHHHhhcC----CeeEEEEcCCCHHHHHHHHHhCCC--CCCCEEEEcCCcEEE
Confidence 45669999998876 44677444 4444888776 999999999999999999999887 458999999999999
Q ss_pred cCCCccccCcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCC
Q 001705 827 FPWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGF 906 (1024)
Q Consensus 827 ~~~~~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~ 906 (1024)
+. +....+..|...+...|....+...+..+.. +.++....+..+|++++.++.......+++.+.+...+.
T Consensus 84 ~~-~~~~~d~~w~~~l~~~w~~~~v~~~~~~~~~-------l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~ 155 (413)
T PLN02382 84 YG-ESMVPDHGWVEYLNKKWDREIVVEETSKFPE-------LKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGL 155 (413)
T ss_pred eC-CCCccChhHHHHHhccCChhhHHHHHhcCCC-------cccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCC
Confidence 86 3566788999999999986544444333322 234555667789999987543323334556666666667
Q ss_pred eEEEEEecCCeEEEEecCCCCHHHHHHHHHHHh---CCCCCCEEEEeCCCCCCChHHhhcCCC-ceEEecCCCCCChHHH
Q 001705 907 RCNLVYTRAGSRLNVVPSFASRIQALRYLSIRW---GIDLSKMVVFVGEKGDTDYEDLLVGLH-KTLILRGSVMYGSEKL 982 (1024)
Q Consensus 907 ~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~---gi~~~~vvafiGDs~N~D~~~Ml~~ag-~gVaMgna~~NA~~el 982 (1024)
.+.++++++. ++||+|+++|||+||++|++++ |++++++++| ||++| | ++||+.+| +||||+ ||.+++
T Consensus 156 ~~~i~~s~~~-~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iaf-GDs~N-D-leMl~~ag~~gvam~----NA~~el 227 (413)
T PLN02382 156 DVKIIYSGGI-DLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVC-GDSGN-D-AELFSVPDVYGVMVS----NAQEEL 227 (413)
T ss_pred cEEEEEECCc-EEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEE-eCCHH-H-HHHHhcCCCCEEEEc----CCcHHH
Confidence 8889999886 9999999999999999999999 9999999998 99999 9 99999999 899999 999999
Q ss_pred hcccccCCCCCccCCCCCCeeEeccccChhHHHHHHHhccc
Q 001705 983 LHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAIKI 1023 (1024)
Q Consensus 983 k~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~~~ 1023 (1024)
|+.++.+ + .+.+++. .+.++.++||++||++|++
T Consensus 228 k~~a~~~-----~-~~~~~~~-~a~~~~~~GI~~al~~f~l 261 (413)
T PLN02382 228 LQWYAEN-----A-KDNPKII-HATERCAAGIIQAIGHFNL 261 (413)
T ss_pred HHHHHhh-----c-cCCCcEE-EcCCCCccHHHHHHHHhCC
Confidence 9876522 1 2334554 4578899999999999985
|
|
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-30 Score=295.06 Aligned_cols=355 Identities=22% Similarity=0.262 Sum_probs=249.5
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++++.+ + ..||.++++.+|+++|.+.| |+|++++.... +. .+.. ..
T Consensus 1 ~il~~~~~---------~----~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~-~~--------~~~~--------~~ 48 (360)
T cd04951 1 KILYVITG---------L----GLGGAEKQVVDLADQFVAKG--HQVAIISLTGE-SE--------VKPP--------ID 48 (360)
T ss_pred CeEEEecC---------C----CCCCHHHHHHHHHHhcccCC--ceEEEEEEeCC-CC--------ccch--------hh
Confidence 47888754 2 26999999999999999999 99999986421 10 0000 00
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccC-CCC
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGAL-NVP 329 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~-~ip 329 (1024)
......++.... .+. +.. ....+.+.+.+ .+||+||+|......++.+++... ++|
T Consensus 49 ~~~~~~~~~~~~--------~~~----~~~----~~~~~~~~~~~-------~~pdiv~~~~~~~~~~~~l~~~~~~~~~ 105 (360)
T cd04951 49 ATIILNLNMSKN--------PLS----FLL----ALWKLRKILRQ-------FKPDVVHAHMFHANIFARLLRLFLPSPP 105 (360)
T ss_pred ccceEEeccccc--------chh----hHH----HHHHHHHHHHh-------cCCCEEEEcccchHHHHHHHHhhCCCCc
Confidence 111122221110 111 111 11122222222 579999999887666666655443 689
Q ss_pred EEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh
Q 001705 330 MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409 (1024)
Q Consensus 330 iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~ 409 (1024)
++++.|+..... . ..... .+.....++.++++|....+.+.....
T Consensus 106 ~v~~~h~~~~~~------------~---~~~~~-----~~~~~~~~~~~~~~s~~~~~~~~~~~~--------------- 150 (360)
T cd04951 106 LICTAHSKNEGG------------R---LRMLA-----YRLTDFLSDLTTNVSKEALDYFIASKA--------------- 150 (360)
T ss_pred EEEEeeccCchh------------H---HHHHH-----HHHHhhccCceEEEcHHHHHHHHhccC---------------
Confidence 999999763210 0 00011 122344577788888776666433211
Q ss_pred cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCC
Q 001705 410 RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPK 489 (1024)
Q Consensus 410 ~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~ 489 (1024)
.+..++.+||||+|...|.+... ........+...+++++++++||+.+.
T Consensus 151 -------~~~~~~~~i~ng~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~g~~~~~ 200 (360)
T cd04951 151 -------FNANKSFVVYNGIDTDRFRKDPA-----------------------RRLKIRNALGVKNDTFVILAVGRLVEA 200 (360)
T ss_pred -------CCcccEEEEccccchhhcCcchH-----------------------HHHHHHHHcCcCCCCEEEEEEeeCchh
Confidence 11238999999999877654321 111122233345678899999999999
Q ss_pred CCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhc
Q 001705 490 KNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 568 (1024)
Q Consensus 490 Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~ 568 (1024)
||++.+++|+.++. ...+++.+ |+|+++. ...+.+.+.++++.++|.|+|. .+++..+|+.|
T Consensus 201 kg~~~li~a~~~l~--~~~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a-- 263 (360)
T cd04951 201 KDYPNLLKAFAKLL--SDYLDIKLLIAGDGPL-----------RATLERLIKALGLSNRVKLLGL--RDDIAAYYNAA-- 263 (360)
T ss_pred cCcHHHHHHHHHHH--hhCCCeEEEEEcCCCc-----------HHHHHHHHHhcCCCCcEEEecc--cccHHHHHHhh--
Confidence 99999999999885 34466776 7787764 2456677788888889999997 47899999999
Q ss_pred CCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHH
Q 001705 569 TKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLA-DKNMWSECRKNGL 647 (1024)
Q Consensus 569 ~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~ 647 (1024)
|++|+||..|+||++++||||+|+|||+++.|+..|++.+ +|++++++|+++++++|.++++ +++.+..++.+ +
T Consensus 264 --d~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~-~ 338 (360)
T cd04951 264 --DLFVLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDPEALANKIDEILKMSGEERDIIGAR-R 338 (360)
T ss_pred --ceEEecccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHH-H
Confidence 9999999999999999999999999999999999999975 8999999999999999999995 55655555555 6
Q ss_pred HHH-hcCCHHHHHHHHHHHHH
Q 001705 648 KNI-HRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 648 ~~~-~~fsw~~~a~~~l~~~~ 667 (1024)
+.+ +.|||+.++++|.++|.
T Consensus 339 ~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 339 ERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHHhcCHHHHHHHHHHHhh
Confidence 666 79999999999999985
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-30 Score=291.91 Aligned_cols=361 Identities=22% Similarity=0.263 Sum_probs=262.1
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++|... ++ .||.+++++.|+++|.+.| ++|.+++.....+. ... ....
T Consensus 1 ~i~~i~~~---------~~----~gG~~~~~~~l~~~l~~~~--~~v~~~~~~~~~~~-----~~~----------~~~~ 50 (365)
T cd03807 1 KVLHVITG---------LD----VGGAERMLVRLLKGLDRDR--FEHVVISLTDRGEL-----GEE----------LEEA 50 (365)
T ss_pred CeEEEEee---------cc----CccHHHHHHHHHHHhhhcc--ceEEEEecCcchhh-----hHH----------HHhc
Confidence 57888855 22 3999999999999999999 99999987532111 010 1113
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHcc-CCCC
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGA-LNVP 329 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~-~~ip 329 (1024)
++.++.++.... +..+. +. ..+.+.+.+ .+||+||+|.......+...... .++|
T Consensus 51 ~i~v~~~~~~~~---------~~~~~-~~-------~~~~~~~~~-------~~~div~~~~~~~~~~~~~~~~~~~~~~ 106 (365)
T cd03807 51 GVPVYCLGKRPG---------RPDPG-AL-------LRLYKLIRR-------LRPDVVHTWMYHADLYGGLAARLAGVPP 106 (365)
T ss_pred CCeEEEEecccc---------cccHH-HH-------HHHHHHHHh-------hCCCEEEeccccccHHHHHHHHhcCCCc
Confidence 777777664211 11111 11 112222222 47999999987666665555555 6899
Q ss_pred EEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh
Q 001705 330 MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409 (1024)
Q Consensus 330 iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~ 409 (1024)
++++.|+...... + ........ .+......++.+++.|....+.+... ++..
T Consensus 107 ~i~~~~~~~~~~~------~-------~~~~~~~~--~~~~~~~~~~~~i~~s~~~~~~~~~~--~~~~----------- 158 (365)
T cd03807 107 VIWGIRHSDLDLG------K-------KSTRLVAR--LRRLLSSFIPLIVANSAAAAEYHQAI--GYPP----------- 158 (365)
T ss_pred EEEEecCCccccc------c-------hhHhHHHH--HHHHhccccCeEEeccHHHHHHHHHc--CCCh-----------
Confidence 9999998643311 0 00111112 24456778999999998776654332 1222
Q ss_pred cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCC
Q 001705 410 RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPK 489 (1024)
Q Consensus 410 ~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~ 489 (1024)
.++.++|||+|...+.+... ........+..+++.++|+++||+.+.
T Consensus 159 ----------~~~~vi~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~i~~~G~~~~~ 205 (365)
T cd03807 159 ----------KKIVVIPNGVDTERFSPDLD-----------------------ARARLREELGLPEDTFLIGIVARLHPQ 205 (365)
T ss_pred ----------hheeEeCCCcCHHhcCCccc-----------------------chHHHHHhcCCCCCCeEEEEecccchh
Confidence 28899999999887754431 011112233345677899999999999
Q ss_pred CCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHH-HcCCCCCEEeCCCCCCCCHHHHHHHhh
Q 001705 490 KNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLID-KYDLYGQVAYPKHHKQSDVPDIYRLAA 567 (1024)
Q Consensus 490 Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~-~~~l~~~V~~~g~~~~~el~~ly~~A~ 567 (1024)
||++.+++|+..+.+ ..+++.+ ++|.++... .+..... .+++.++|.|.|. .+++..+|+.|
T Consensus 206 K~~~~li~a~~~l~~--~~~~~~l~i~G~~~~~~-----------~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a- 269 (365)
T cd03807 206 KDHATLLRAAALLLK--KFPNARLLLVGDGPDRA-----------NLELLALKELGLEDKVILLGE--RSDVPALLNAL- 269 (365)
T ss_pred cCHHHHHHHHHHHHH--hCCCeEEEEecCCcchh-----------HHHHHHHHhcCCCceEEEccc--cccHHHHHHhC-
Confidence 999999999999853 3566766 667765422 2233333 7788889999996 57899999999
Q ss_pred cCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 001705 568 KTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGL 647 (1024)
Q Consensus 568 ~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~ 647 (1024)
|++++|+..|+||++++|||+||+|||+++.|+..+++.+ +|+++++.|+++++++|.+++++++.+.+++++++
T Consensus 270 ---di~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~ 344 (365)
T cd03807 270 ---DVFVLSSLSEGFPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALLADPALRQALGEAAR 344 (365)
T ss_pred ---CEEEeCCccccCCcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999976 89999999999999999999999999999999999
Q ss_pred HHH-hcCCHHHHHHHHHHHHH
Q 001705 648 KNI-HRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 648 ~~~-~~fsw~~~a~~~l~~~~ 667 (1024)
+.+ ++|||+..+++|.+.|+
T Consensus 345 ~~~~~~~s~~~~~~~~~~~y~ 365 (365)
T cd03807 345 ERIEENFSIEAMVEAYEELYR 365 (365)
T ss_pred HHHHHhCCHHHHHHHHHHHhC
Confidence 998 68999999999999873
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-30 Score=290.02 Aligned_cols=344 Identities=23% Similarity=0.343 Sum_probs=250.1
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++++.. ++ + .||.++++.+|+++|.+.| |+|++++..... . ... ...+
T Consensus 1 kI~i~~~~---------~~--~-~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~-~-------~~~--------~~~~ 50 (348)
T cd03820 1 KILFVIPS---------LG--N-AGGAERVLSNLANALAEKG--HEVTIISLDKGE-P-------PFY--------ELDP 50 (348)
T ss_pred CeEEEecc---------cc--C-CCChHHHHHHHHHHHHhCC--CeEEEEecCCCC-C-------Ccc--------ccCC
Confidence 58888855 22 2 8999999999999999999 999999886432 0 000 1123
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCC-CC
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALN-VP 329 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~-ip 329 (1024)
++.+..++..... ..+..+ . ....+.+.+.+ .+||+||+|+........ ....+ +|
T Consensus 51 ~~~~~~~~~~~~~------~~~~~~-~-------~~~~~~~~l~~-------~~~d~i~~~~~~~~~~~~--~~~~~~~~ 107 (348)
T cd03820 51 KIKVIDLGDKRDS------KLLARF-K-------KLRRLRKLLKN-------NKPDVVISFLTSLLTFLA--SLGLKIVK 107 (348)
T ss_pred ccceeeccccccc------chhccc-c-------chHHHHHhhcc-------cCCCEEEEcCchHHHHHH--HHhhcccc
Confidence 6666666542220 000000 0 01111112211 479999999876222212 22223 59
Q ss_pred EEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh
Q 001705 330 MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409 (1024)
Q Consensus 330 iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~ 409 (1024)
++++.|+....... . . .....++..++.+|.+++.|+.........
T Consensus 108 ~i~~~~~~~~~~~~-----------~--~----~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~----------------- 153 (348)
T cd03820 108 LIVSEHNSPDAYKK-----------R--L----RRLLLRRLLYRRADAVVVLTEEDRALYYKK----------------- 153 (348)
T ss_pred EEEecCCCccchhh-----------h--h----HHHHHHHHHHhcCCEEEEeCHHHHHHhhcc-----------------
Confidence 99999975322110 0 0 001135667899999999998765221111
Q ss_pred cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCC
Q 001705 410 RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPK 489 (1024)
Q Consensus 410 ~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~ 489 (1024)
...++.++|||++...+.+. ...+++.|+++|++.+.
T Consensus 154 --------~~~~~~vi~~~~~~~~~~~~-----------------------------------~~~~~~~i~~~g~~~~~ 190 (348)
T cd03820 154 --------FNKNVVVIPNPLPFPPEEPS-----------------------------------SDLKSKRILAVGRLVPQ 190 (348)
T ss_pred --------CCCCeEEecCCcChhhcccc-----------------------------------CCCCCcEEEEEEeeccc
Confidence 11389999999998755322 02457899999999999
Q ss_pred CCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhc
Q 001705 490 KNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 568 (1024)
Q Consensus 490 Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~ 568 (1024)
||++.+++|+..+.+ ..+++.+ ++|.++.. ..+.+++.++++.++|.|.|. .+++..+|+.|
T Consensus 191 K~~~~l~~~~~~l~~--~~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a-- 253 (348)
T cd03820 191 KGFDLLIEAWAKIAK--KHPDWKLRIVGDGPER-----------EALEALIKELGLEDRVILLGF--TKNIEEYYAKA-- 253 (348)
T ss_pred cCHHHHHHHHHHHHh--cCCCeEEEEEeCCCCH-----------HHHHHHHHHcCCCCeEEEcCC--cchHHHHHHhC--
Confidence 999999999999963 4566666 77876542 345567888899999999998 78999999999
Q ss_pred CCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCC-CchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 001705 569 TKGVFINPALVEPFGLTIIEAAAYGLPVVATKNG-GPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGL 647 (1024)
Q Consensus 569 ~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~G-g~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~ 647 (1024)
|++|+||..|+||++++|||+||+|||+++.+ +..+++.++.+|+++++.|+++++++|.+++++|+.+++++++++
T Consensus 254 --d~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~ 331 (348)
T cd03820 254 --SIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDEELRKRMGANAR 331 (348)
T ss_pred --CEEEeCccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999864 567788777799999999999999999999999999999999997
Q ss_pred HHHhcCCHHHHHHHHH
Q 001705 648 KNIHRFSWPEHCRNYL 663 (1024)
Q Consensus 648 ~~~~~fsw~~~a~~~l 663 (1024)
+.++.|+|+.++++|.
T Consensus 332 ~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 332 ESAERFSIENIIKQWE 347 (348)
T ss_pred HHHHHhCHHHHHHHhc
Confidence 7778999999999885
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-30 Score=289.19 Aligned_cols=371 Identities=27% Similarity=0.350 Sum_probs=268.8
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++++.. ++ +..||...++..|+++|.+.| |+|++++........... . .
T Consensus 1 kI~ii~~~---------~~--~~~~G~~~~~~~l~~~L~~~g--~~v~i~~~~~~~~~~~~~-----~-----------~ 51 (374)
T cd03801 1 KILLVTPE---------YP--PSVGGAERHVLELARALAARG--HEVTVLTPGDGGLPDEEE-----V-----------G 51 (374)
T ss_pred CeeEEecc---------cC--CccCcHhHHHHHHHHHHHhcC--ceEEEEecCCCCCCceee-----e-----------c
Confidence 68899866 22 337999999999999999999 999999987432211000 0 0
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCE
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPM 330 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipi 330 (1024)
......... +... ............+...+.+ .+||+||+|++........+....++|+
T Consensus 52 ~~~~~~~~~------------~~~~-~~~~~~~~~~~~~~~~~~~-------~~~Dii~~~~~~~~~~~~~~~~~~~~~~ 111 (374)
T cd03801 52 GIVVVRPPP------------LLRV-RRLLLLLLLALRLRRLLRR-------ERFDVVHAHDWLALLAAALAARLLGIPL 111 (374)
T ss_pred CcceecCCc------------cccc-chhHHHHHHHHHHHHHhhh-------cCCcEEEEechhHHHHHHHHHHhcCCcE
Confidence 001110000 0000 0000011111112222222 4799999999876666556677789999
Q ss_pred EEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhc
Q 001705 331 VLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQR 410 (1024)
Q Consensus 331 V~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~ 410 (1024)
+++.|+......... ....+. .....+...+..+|.+++.|....+.+...+..
T Consensus 112 i~~~h~~~~~~~~~~---------~~~~~~--~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~--------------- 165 (374)
T cd03801 112 VLTVHGLEFGRPGNE---------LGLLLK--LARALERRALRRADRIIAVSEATREELRELGGV--------------- 165 (374)
T ss_pred EEEeccchhhccccc---------hhHHHH--HHHHHHHHHHHhCCEEEEecHHHHHHHHhcCCC---------------
Confidence 999998754321100 000111 122235677899999999999888776554321
Q ss_pred CccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCC
Q 001705 411 GVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKK 490 (1024)
Q Consensus 411 g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~K 490 (1024)
...++.++|||+|...+.+.. ..........++++.|+++|++.+.|
T Consensus 166 -------~~~~~~~i~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~i~~~g~~~~~k 212 (374)
T cd03801 166 -------PPEKITVIPNGVDTERFRPAP--------------------------RAARRRLGIPEDEPVILFVGRLVPRK 212 (374)
T ss_pred -------CCCcEEEecCcccccccCccc--------------------------hHHHhhcCCcCCCeEEEEecchhhhc
Confidence 112899999999988764321 00001111235678999999999999
Q ss_pred CHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcC
Q 001705 491 NVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKT 569 (1024)
Q Consensus 491 gi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~ 569 (1024)
|++.+++|+..+.. ..+++.+ ++|+++ ....+...+.+++...+|.+.|+++.+++..+|+.|
T Consensus 213 ~~~~~i~~~~~~~~--~~~~~~l~i~G~~~-----------~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~--- 276 (374)
T cd03801 213 GVDLLLEALAKLRK--EYPDVRLVIVGDGP-----------LREELEALAAELGLGDRVTFLGFVPDEDLPALYAAA--- 276 (374)
T ss_pred CHHHHHHHHHHHhh--hcCCeEEEEEeCcH-----------HHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhc---
Confidence 99999999999853 3466776 667543 245566777788899999999999999999999999
Q ss_pred CcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 001705 570 KGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKN 649 (1024)
Q Consensus 570 ~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~ 649 (1024)
|++++|+..|++|++++|||+||+|||+++.++..+++.++.+|+++++.|+++++++|.+++++++.++++++++++.
T Consensus 277 -di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~ 355 (374)
T cd03801 277 -DVFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPELRRRLGEAARER 355 (374)
T ss_pred -CEEEecchhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcChHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998899999999999999999999999999999999999977
Q ss_pred H-hcCCHHHHHHHHHHHH
Q 001705 650 I-HRFSWPEHCRNYLSHV 666 (1024)
Q Consensus 650 ~-~~fsw~~~a~~~l~~~ 666 (1024)
+ +.|+|+.+++++.+.|
T Consensus 356 ~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 356 VAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHhcCHHHHHHHHHHhh
Confidence 7 7999999999999876
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-30 Score=298.91 Aligned_cols=375 Identities=17% Similarity=0.171 Sum_probs=243.0
Q ss_pred CceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCC-
Q 001705 168 RNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDG- 246 (1024)
Q Consensus 168 ~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~- 246 (1024)
++|||++++.-++ |..+|+...+..++..|+++|. |+|+|+++......-...|+.....-++...+
T Consensus 3 ~~mrIaivTdt~l-----------P~vnGva~s~~~~a~~L~~~G~-heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~ 70 (462)
T PLN02846 3 KKQHIAIFTTASL-----------PWMTGTAVNPLFRAAYLAKDGD-REVTLVIPWLSLKDQKLVYPNKITFSSPSEQEA 70 (462)
T ss_pred CCCEEEEEEcCCC-----------CCCCCeeccHHHHHHHHHhcCC-cEEEEEecCCccccccccccccccccCchhhhh
Confidence 5699999997643 7899999999999999999993 49999988653111001111000000000000
Q ss_pred --CCCCCeEEEEecCCCCCCccc-----cccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC-ChHHH
Q 001705 247 --TGSCGAYIIRIPCGARDKYIA-----KESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYA-DAGEV 318 (1024)
Q Consensus 247 --~~~~gv~i~rip~~~~~~~~~-----k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~-~~~~~ 318 (1024)
.+..+-+++++|.-+...|-. ...+||. ..+.+.+.+ .+|||||+|.. ..++.
T Consensus 71 ~~~~~~~~~v~r~~s~~~p~yp~r~~~~~r~~~~~------------~~i~~~l~~-------~~pDVIHv~tP~~LG~~ 131 (462)
T PLN02846 71 YVRQWLEERISFLPKFSIKFYPGKFSTDKRSILPV------------GDISETIPD-------EEADIAVLEEPEHLTWY 131 (462)
T ss_pred hhhhhccCeEEEecccccccCcccccccccccCCh------------HHHHHHHHh-------cCCCEEEEcCchhhhhH
Confidence 111234566666433311100 0111111 122222322 58999999987 56665
Q ss_pred --HHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhh-hcCCEEEeCCHHHHHHHHhcccC
Q 001705 319 --AAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGL-DASEMVVTSTRQEIEMQWGLYDG 395 (1024)
Q Consensus 319 --a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l-~~Ad~Vi~~S~~~~~~~~~~~~~ 395 (1024)
+...++++++ +|.+.|.-...+...+ ..|.... ...++..+ .+. ..+|.|++.|... +++.+
T Consensus 132 ~~g~~~~~k~~~-vV~tyHT~y~~Y~~~~-~~g~~~~---~l~~~~~~-----~~~r~~~d~vi~pS~~~-~~l~~---- 196 (462)
T PLN02846 132 HHGKRWKTKFRL-VIGIVHTNYLEYVKRE-KNGRVKA---FLLKYINS-----WVVDIYCHKVIRLSAAT-QDYPR---- 196 (462)
T ss_pred HHHHHHHhcCCc-EEEEECCChHHHHHHh-ccchHHH---HHHHHHHH-----HHHHHhcCEEEccCHHH-HHHhh----
Confidence 6666766655 8889998433332211 1111111 01111111 111 2489999999733 22210
Q ss_pred cchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCC
Q 001705 396 FDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNP 475 (1024)
Q Consensus 396 f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 475 (1024)
.+.+.++|||.+.|.+... . .+ +.....
T Consensus 197 -------------------------~~i~~v~GVd~~~f~~~~~----~-~~----------------------~~~~~~ 224 (462)
T PLN02846 197 -------------------------SIICNVHGVNPKFLEIGKL----K-LE----------------------QQKNGE 224 (462)
T ss_pred -------------------------CEEecCceechhhcCCCcc----c-Hh----------------------hhcCCC
Confidence 3455679999998866541 0 00 000112
Q ss_pred C--CcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCC
Q 001705 476 H--KPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPK 552 (1024)
Q Consensus 476 ~--~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g 552 (1024)
+ .+.++|+||+.+.||++.||+|+..+. ...+++.| |+|+|++. .++++++.++++..++ |.|
T Consensus 225 ~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~--~~~~~~~l~ivGdGp~~-----------~~L~~~a~~l~l~~~v-f~G 290 (462)
T PLN02846 225 QAFTKGAYYIGKMVWSKGYKELLKLLHKHQ--KELSGLEVDLYGSGEDS-----------DEVKAAAEKLELDVRV-YPG 290 (462)
T ss_pred CCcceEEEEEecCcccCCHHHHHHHHHHHH--hhCCCeEEEEECCCccH-----------HHHHHHHHhcCCcEEE-ECC
Confidence 2 357999999999999999999999884 33456655 88999873 4567888888876444 778
Q ss_pred CCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHH
Q 001705 553 HHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKL 632 (1024)
Q Consensus 553 ~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~l 632 (1024)
.. +..++|+.+ ||||+||..|+||++++||||||+|||+++.++ .+++.++.||++++ |.++++++|.++
T Consensus 291 ~~---~~~~~~~~~----DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai~~~ 360 (462)
T PLN02846 291 RD---HADPLFHDY----KVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRATLKA 360 (462)
T ss_pred CC---CHHHHHHhC----CEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHHHHH
Confidence 63 445799999 999999999999999999999999999999998 59999999999995 899999999999
Q ss_pred HhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Q 001705 633 LADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHS 669 (1024)
Q Consensus 633 l~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~ 669 (1024)
++++. .+++..++ +.|||+..+++|++.++-.
T Consensus 361 l~~~~--~~~~~~a~---~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 361 LAEEP--APLTDAQR---HELSWEAATERFLRVADLD 392 (462)
T ss_pred HccCc--hhHHHHHH---HhCCHHHHHHHHHHHhccC
Confidence 98532 22222222 5899999999999999743
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.1e-32 Score=298.22 Aligned_cols=236 Identities=13% Similarity=0.136 Sum_probs=167.4
Q ss_pred EEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCC
Q 001705 750 IVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPW 829 (1024)
Q Consensus 750 llIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~ 829 (1024)
.+|++|+||||+++++.++++++++|++++++ |+.|+|||||++.++.++++++++. +++||+||+.|++.+
T Consensus 3 kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~I~~~~ 74 (272)
T PRK15126 3 RLAAFDMDGTLLMPDHHLGEKTLSTLARLRER----DITLTFATGRHVLEMQHILGALSLD----AYLITGNGTRVHSLE 74 (272)
T ss_pred cEEEEeCCCcCcCCCCcCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHcCCC----CcEEecCCcEEEcCC
Confidence 36779999999998889999999999999998 9999999999999999999998873 479999999999743
Q ss_pred CccccC-----cchhhhhccc--------------CCc-hhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCC
Q 001705 830 RDMVAD-----GDYEAHVEYR--------------WPG-ENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGA 889 (1024)
Q Consensus 830 ~~~~~d-----~~~~~~i~~~--------------w~~-~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 889 (1024)
+..... ......+... |.. ..............................+|+.+.. ++
T Consensus 75 ~~~l~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~-~~- 152 (272)
T PRK15126 75 GELLHRQDLPADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCG-DH- 152 (272)
T ss_pred CCEEEeecCCHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEEC-CH-
Confidence 321100 0000001000 000 0000000000000000000000001112345655443 22
Q ss_pred chhhHHHHHHHHHhc-CCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCce
Q 001705 890 ETRKVDNIRQRLRMR-GFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKT 968 (1024)
Q Consensus 890 ~~~~~~el~~~L~~~-~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~g 968 (1024)
..++++.+.+... ...+.++.+... ++||+|+++|||+||++|++++||++++++|| ||+.| | ++||+.+|+|
T Consensus 153 --~~~~~~~~~l~~~~~~~~~~~~s~~~-~~eI~~~g~sKg~al~~l~~~~gi~~~~v~af-GD~~N-D-i~Ml~~ag~~ 226 (272)
T PRK15126 153 --DDLTRLQIQLNEALGERAHLCFSATD-CLEVLPVGCNKGAALAVLSQHLGLSLADCMAF-GDAMN-D-REMLGSVGRG 226 (272)
T ss_pred --HHHHHHHHHHHHHhcCCEEEEEcCCc-EEEeecCCCChHHHHHHHHHHhCCCHHHeEEe-cCCHH-H-HHHHHHcCCc
Confidence 2345666666443 345777777775 99999999999999999999999999999998 99999 9 9999999999
Q ss_pred EEecCCCCCChHHHhcccccCCCCCccCCCCCCeeE--eccccChhHHHHHHHhc
Q 001705 969 LILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAY--IEESYEPQDLSAALKAI 1021 (1024)
Q Consensus 969 VaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~--vt~~~~~dgI~~aL~~~ 1021 (1024)
|||+ ||.+++|++|+ + ||.+|++|||+.+|+++
T Consensus 227 vAm~----Na~~~vK~~A~----------------~~~v~~~n~edGva~~l~~~ 261 (272)
T PRK15126 227 FIMG----NAMPQLRAELP----------------HLPVIGHCRNQAVSHYLTHW 261 (272)
T ss_pred eecc----CChHHHHHhCC----------------CCeecCCCcchHHHHHHHHH
Confidence 9999 99999999998 5 78899999999999986
|
|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-30 Score=295.78 Aligned_cols=363 Identities=24% Similarity=0.340 Sum_probs=256.1
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++++.+ ++ +...||.++|+.+|+++|++.| |.|++++........... .. .
T Consensus 1 ~ili~~~~---------~~-~~~~gG~~~~~~~l~~~L~~~~--~~v~~~~~~~~~~~~~~~-----~~----------~ 53 (365)
T cd03809 1 RILIDARF---------LA-SRRPTGIGRYARELLRALLKLD--PEEVLLLLPGAPGLLLLP-----LR----------A 53 (365)
T ss_pred CEEEechh---------hh-cCCCCcHHHHHHHHHHHHHhcC--CceEEEEecCcccccccc-----ch----------h
Confidence 57788766 33 1278999999999999999999 999999887432221100 00 0
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCE
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPM 330 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipi 330 (1024)
.... ... ......+..+..+.. .... .+.. .+||+||++++..... +..++|+
T Consensus 54 ~~~~--~~~------~~~~~~~~~~~~~~~---~~~~----~~~~-------~~~Dii~~~~~~~~~~-----~~~~~~~ 106 (365)
T cd03809 54 ALRL--LLR------LPRRLLWGLLFLLRA---GDRL----LLLL-------LGLDLLHSPHNTAPLL-----RLRGVPV 106 (365)
T ss_pred cccc--ccc------cccccccchhhHHHH---HHHH----Hhhh-------cCCCeeeecccccCcc-----cCCCCCE
Confidence 0000 000 001111111111111 1110 1111 4699999998754443 5668999
Q ss_pred EEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhc
Q 001705 331 VLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQR 410 (1024)
Q Consensus 331 V~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~ 410 (1024)
++++|++.+........ .......+. .++..++.+|.+++.|+...+.+...+.. ..
T Consensus 107 i~~~hd~~~~~~~~~~~--------~~~~~~~~~--~~~~~~~~~d~~i~~s~~~~~~~~~~~~~-~~------------ 163 (365)
T cd03809 107 VVTIHDLIPLRFPEYFS--------PGFRRYFRR--LLRRALRRADAIITVSEATKRDLLRYLGV-PP------------ 163 (365)
T ss_pred EEEeccchhhhCcccCC--------HHHHHHHHH--HHHHHHHHcCEEEEccHHHHHHHHHHhCc-CH------------
Confidence 99999975543221110 001122222 25678899999999999888776555431 11
Q ss_pred CccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCC
Q 001705 411 GVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKK 490 (1024)
Q Consensus 411 g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~K 490 (1024)
.++.++|||+|...+.+... . ........++++.|+++||+.+.|
T Consensus 164 ---------~~~~vi~~~~~~~~~~~~~~----------------------~----~~~~~~~~~~~~~i~~~G~~~~~K 208 (365)
T cd03809 164 ---------DKIVVIPLGVDPRFRPPPAE----------------------A----EVLRALYLLPRPYFLYVGTIEPRK 208 (365)
T ss_pred ---------HHEEeeccccCccccCCCch----------------------H----HHHHHhcCCCCCeEEEeCCCcccc
Confidence 28999999999887654331 0 011122345678999999999999
Q ss_pred CHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcC
Q 001705 491 NVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKT 569 (1024)
Q Consensus 491 gi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~ 569 (1024)
|++.+++++..+.. ..+++.+ ++|.+..... .....+.+.++..+|.++|+++.+++..+|+.|
T Consensus 209 ~~~~~l~~~~~~~~--~~~~~~l~i~G~~~~~~~----------~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~--- 273 (365)
T cd03809 209 NLERLLEAFARLPA--KGPDPKLVIVGKRGWLNE----------ELLARLRELGLGDRVRFLGYVSDEELAALYRGA--- 273 (365)
T ss_pred CHHHHHHHHHHHHH--hcCCCCEEEecCCccccH----------HHHHHHHHcCCCCeEEECCCCChhHHHHHHhhh---
Confidence 99999999999964 3334444 6676543221 122233567888999999999999999999999
Q ss_pred CcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 001705 570 KGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKN 649 (1024)
Q Consensus 570 ~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~ 649 (1024)
|++++||..|+||++++||||+|+|||+++.|+..|++. .+|+++++.|.++++++|.+++.+++.+.++++++++.
T Consensus 274 -d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~ 350 (365)
T cd03809 274 -RAFVFPSLYEGFGLPVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALAAAIERLLEDPALREELRERGLAR 350 (365)
T ss_pred -hhhcccchhccCCCCHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999985 57999999999999999999999999999999999977
Q ss_pred HhcCCHHHHHHHHH
Q 001705 650 IHRFSWPEHCRNYL 663 (1024)
Q Consensus 650 ~~~fsw~~~a~~~l 663 (1024)
+++|+|+.++++|+
T Consensus 351 ~~~~sw~~~~~~~~ 364 (365)
T cd03809 351 AKRFSWEKTARRTL 364 (365)
T ss_pred HHhCCHHHHHHHHh
Confidence 78999999999886
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.4e-31 Score=285.21 Aligned_cols=366 Identities=19% Similarity=0.249 Sum_probs=265.3
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGS 249 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~ 249 (1024)
++|+|||.+.+ |.+||.+.+++.|++.|-+.| |.|.++|-...+- .++..+ +
T Consensus 1 ~~i~mVsdff~-----------P~~ggveshiy~lSq~li~lg--hkVvvithayg~r-------~giryl--------t 52 (426)
T KOG1111|consen 1 SRILMVSDFFY-----------PSTGGVESHIYALSQCLIRLG--HKVVVITHAYGNR-------VGIRYL--------T 52 (426)
T ss_pred CcceeeCcccc-----------cCCCChhhhHHHhhcchhhcC--CeEEEEeccccCc-------cceeee--------c
Confidence 47999999876 789999999999999999999 9999999874321 233333 3
Q ss_pred CCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC--hHHHHHHHHccCC
Q 001705 250 CGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYAD--AGEVAAHLSGALN 327 (1024)
Q Consensus 250 ~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~--~~~~a~~l~~~~~ 327 (1024)
+|..++.+|.-. ..++..+|-+......+ +. .+.+ .+..+||.|... ...-+.+.++.+|
T Consensus 53 ~glkVyylp~~v----~~n~tT~ptv~~~~Pll-r~------i~lr-------E~I~ivhghs~fS~lahe~l~hartMG 114 (426)
T KOG1111|consen 53 NGLKVYYLPAVV----GYNQTTFPTVFSDFPLL-RP------ILLR-------ERIEIVHGHSPFSYLAHEALMHARTMG 114 (426)
T ss_pred CCceEEEEeeee----eecccchhhhhccCccc-ch------hhhh-------hceEEEecCChHHHHHHHHHHHHHhcC
Confidence 478888888632 33444444332221111 11 1111 368999999874 3444677778889
Q ss_pred CCEEEEeCCC-chhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHH
Q 001705 328 VPMVLTGHSL-GRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRV 406 (1024)
Q Consensus 328 ipiV~t~H~l-~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~ 406 (1024)
.+.|||-|++ |........ +..+ -...|...|.+||+|..-.+.. -+....
T Consensus 115 lktVfTdHSlfGfad~~si~---------------~n~l--l~~sL~~id~~IcVshtskent-vlr~~L---------- 166 (426)
T KOG1111|consen 115 LKTVFTDHSLFGFADIGSIL---------------TNKL--LPLSLANIDRIICVSHTSKENT-VLRGAL---------- 166 (426)
T ss_pred ceEEEeccccccccchhhhh---------------hcce--eeeeecCCCcEEEEeecCCCce-EEEecc----------
Confidence 9999999996 222111110 0011 2346789999999875332211 111111
Q ss_pred hhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCC
Q 001705 407 RRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRP 486 (1024)
Q Consensus 407 ~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRl 486 (1024)
...++.+|||.++.+.|.|.+. . .| ..+...|+.++||
T Consensus 167 -----------~p~kvsvIPnAv~~~~f~P~~~------------------~--~~-----------S~~i~~ivv~sRL 204 (426)
T KOG1111|consen 167 -----------APAKVSVIPNAVVTHTFTPDAA------------------D--KP-----------SADIITIVVASRL 204 (426)
T ss_pred -----------CHhHeeeccceeeccccccCcc------------------c--cC-----------CCCeeEEEEEeee
Confidence 2238999999999999998652 0 01 1344789999999
Q ss_pred CCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHH
Q 001705 487 DPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRL 565 (1024)
Q Consensus 487 d~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~ 565 (1024)
.+.||++.|++++.++. .++|++.+ |+|+||... .+++..+++.++.+|.++|.++.+++.+.|..
T Consensus 205 vyrKGiDll~~iIp~vc--~~~p~vrfii~GDGPk~i-----------~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~ 271 (426)
T KOG1111|consen 205 VYRKGIDLLLEIIPSVC--DKHPEVRFIIIGDGPKRI-----------DLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVR 271 (426)
T ss_pred eeccchHHHHHHHHHHH--hcCCCeeEEEecCCcccc-----------hHHHHHHHhhccCceEEecccchHHHHHHHhc
Confidence 99999999999999996 56788887 778888643 45577888999999999999999999999999
Q ss_pred hhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001705 566 AAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKN 645 (1024)
Q Consensus 566 A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~ 645 (1024)
. |+|++||+.|.||++++|||+||+|||+|++||.+|++-.. -+......++++++++++++..-..- -..
T Consensus 272 G----~IFlntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d--~i~~~~~~~~dl~~~v~~ai~~~~~~---p~~ 342 (426)
T KOG1111|consen 272 G----DIFLNTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED--MITLGEPGPDDLVGAVEKAITKLRTL---PLE 342 (426)
T ss_pred C----cEEeccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc--ceeccCCChHHHHHHHHHHHHHhccC---chh
Confidence 9 99999999999999999999999999999999999998642 23344557889999988888632111 122
Q ss_pred HHHHH-hcCCHHHHHHHHHHHHHHhhhcC
Q 001705 646 GLKNI-HRFSWPEHCRNYLSHVEHSRNRH 673 (1024)
Q Consensus 646 ~~~~~-~~fsw~~~a~~~l~~~~~~~~~~ 673 (1024)
..+.+ +.|+|...+++..+.|.++....
T Consensus 343 ~h~~v~~~y~w~dVa~rTekvy~r~~~t~ 371 (426)
T KOG1111|consen 343 FHDRVKKMYSWKDVAERTEKVYDRAATTS 371 (426)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHhhcc
Confidence 23444 58999999999999999887654
|
|
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.7e-30 Score=297.46 Aligned_cols=344 Identities=24% Similarity=0.224 Sum_probs=245.1
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGS 249 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~ 249 (1024)
|||++++.. ...||.++++.+|+++|.+.| |+|++++...
T Consensus 1 MkIl~~~~~-------------~~~gG~~~~~~~l~~~l~~~G--~~v~v~~~~~------------------------- 40 (365)
T cd03825 1 MKVLHLNTS-------------DISGGAARAAYRLHRALQAAG--VDSTMLVQEK------------------------- 40 (365)
T ss_pred CeEEEEecC-------------CCCCcHHHHHHHHHHHHHhcC--CceeEEEeec-------------------------
Confidence 899999854 235899999999999999999 9999997651
Q ss_pred CCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHcc--CC
Q 001705 250 CGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGA--LN 327 (1024)
Q Consensus 250 ~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~--~~ 327 (1024)
. . ++ +.+. ..+||+||+|+...+.+....... .+
T Consensus 41 -~----~--------------~~------------------~~~~-------~~~~diih~~~~~~~~~~~~~~~~~~~~ 76 (365)
T cd03825 41 -K----A--------------LI------------------SKIE-------IINADIVHLHWIHGGFLSIEDLSKLLDR 76 (365)
T ss_pred -c----h--------------hh------------------hChh-------cccCCEEEEEccccCccCHHHHHHHHcC
Confidence 0 0 00 0000 147999999986544433333333 38
Q ss_pred CCEEEEeCCCchhhhHHHH--------hcCC---CC---cchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcc
Q 001705 328 VPMVLTGHSLGRNKFEQLL--------KQGR---LP---KDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLY 393 (1024)
Q Consensus 328 ipiV~t~H~l~~~~~~~l~--------~~g~---~~---~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~ 393 (1024)
+|+|++.|+.......... ..+. .. ..........++. .......++.++++|+...+.+...+
T Consensus 77 ~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~s~~~~~~~~~~~ 154 (365)
T cd03825 77 KPVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRK--RKAWADLNLTIVAPSRWLADCARSSS 154 (365)
T ss_pred CCEEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHH--HHHhccCCcEEEehhHHHHHHHHhcc
Confidence 9999999986432211000 0000 00 0000111111111 11223567788888876555443322
Q ss_pred cCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhC
Q 001705 394 DGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFT 473 (1024)
Q Consensus 394 ~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 473 (1024)
. ....++.++|||+|.+.|.+... ......+..
T Consensus 155 ~----------------------~~~~~~~vi~ngi~~~~~~~~~~-------------------------~~~~~~~~~ 187 (365)
T cd03825 155 L----------------------FKGIPIEVIPNGIDTTIFRPRDK-------------------------REARKRLGL 187 (365)
T ss_pred c----------------------cCCCceEEeCCCCcccccCCCcH-------------------------HHHHHHhCC
Confidence 1 11238999999999988754431 011222333
Q ss_pred CCCCcEEEEEeCCCC--CCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEe
Q 001705 474 NPHKPTILALSRPDP--KKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAY 550 (1024)
Q Consensus 474 ~~~~~~Il~vgRld~--~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~ 550 (1024)
.++++++++.|+... .||++.+++|+..+... ..+++.+ ++|+++.... .++..+|.|
T Consensus 188 ~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~-~~~~~~~~i~G~~~~~~~------------------~~~~~~v~~ 248 (365)
T cd03825 188 PADKKIILFGAVGGTDPRKGFDELIEALKRLAER-WKDDIELVVFGASDPEIP------------------PDLPFPVHY 248 (365)
T ss_pred CCCCeEEEEEecCCCccccCHHHHHHHHHHhhhc-cCCCeEEEEeCCCchhhh------------------ccCCCceEe
Confidence 456677777777655 89999999999988532 2467766 6676643111 145568999
Q ss_pred CCCCC-CCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHH
Q 001705 551 PKHHK-QSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADAL 629 (1024)
Q Consensus 551 ~g~~~-~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI 629 (1024)
+|+++ .+++..+|+.| |++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|+++++++|
T Consensus 249 ~g~~~~~~~~~~~~~~a----d~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l 324 (365)
T cd03825 249 LGSLNDDESLALIYSAA----DVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGI 324 (365)
T ss_pred cCCcCCHHHHHHHHHhC----CEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHH
Confidence 99998 67899999999 99999999999999999999999999999999999999998899999999999999999
Q ss_pred HHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001705 630 LKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYLSHVEHS 669 (1024)
Q Consensus 630 ~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~ 669 (1024)
.+++.+++.+.++++++++.+ ++|||+.++++|+++|+++
T Consensus 325 ~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 325 EWLLADPDEREELGEAARELAENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 999999999999999999998 6999999999999999753
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.8e-31 Score=286.19 Aligned_cols=236 Identities=22% Similarity=0.356 Sum_probs=186.6
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCC
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWR 830 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~ 830 (1024)
+|++|+||||+++++.+++.+ ++++ ++++ |+.|++||||++.++..+++.+++. .+|++||+||+.|++..
T Consensus 1 li~~DlDgTLl~~~~~~~~~~-~~~~-~~~~----gi~~viaTGR~~~~v~~~~~~l~l~--~~~~~I~~nGa~i~~~~- 71 (236)
T TIGR02471 1 LIITDLDNTLLGDDEGLASFV-ELLR-GSGD----AVGFGIATGRSVESAKSRYAKLNLP--SPDVLIARVGTEIYYGP- 71 (236)
T ss_pred CeEEeccccccCCHHHHHHHH-HHHH-hcCC----CceEEEEeCCCHHHHHHHHHhCCCC--CCCEEEECCCceEEeCC-
Confidence 467999999888888888877 7776 5555 9999999999999999999998873 58899999999998752
Q ss_pred ccccCcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEE
Q 001705 831 DMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNL 910 (1024)
Q Consensus 831 ~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v 910 (1024)
....+..|...+...|....+...+..++. +..+.......+++.+...+ .....+.++.+.+...+..+.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~l~~~~~~~~~ 143 (236)
T TIGR02471 72 ELQPDRFWQKHIDHDWRRQAVVEALADIPG-------LTLQDDQEQGPFKISYLLDP-EGEPILPQIRQRLRQQSQAAKV 143 (236)
T ss_pred CCCCChhHHHHHhcCCCHHHHHHHHhcCCC-------cEeCChhcCCCeeEEEEECc-ccchHHHHHHHHHHhccCCEEE
Confidence 334456676667777775544433322221 22333333456888887643 2223456777777766666778
Q ss_pred EEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCC
Q 001705 911 VYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFK 990 (1024)
Q Consensus 911 ~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~ 990 (1024)
+.+++. ++||+|+++|||.||++|++++|++++++++| ||+.| | ++||+.+|+||+|+ ||.+++|+.|+..
T Consensus 144 ~~~~~~-~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~~-GD~~n-D-~~ml~~~~~~iav~----na~~~~k~~a~~~- 214 (236)
T TIGR02471 144 ILSCGW-FLDVLPLRASKGLALRYLSYRWGLPLEQILVA-GDSGN-D-EEMLRGLTLGVVVG----NHDPELEGLRHQQ- 214 (236)
T ss_pred EEECCc-eEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE-cCCcc-H-HHHHcCCCcEEEEc----CCcHHHHHhhcCC-
Confidence 888875 99999999999999999999999999999998 99999 9 99999999999999 9999999998821
Q ss_pred CCCccCCCCCCeeEeccccChhHHHHHHHhccc
Q 001705 991 REDVVPPDSPNIAYIEESYEPQDLSAALKAIKI 1023 (1024)
Q Consensus 991 ~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~~~ 1023 (1024)
-.|||.++.++||+++|+++++
T Consensus 215 -----------~~~v~~~~~~~Gv~~~i~~~~~ 236 (236)
T TIGR02471 215 -----------RIYFANNPHAFGILEGINHYDF 236 (236)
T ss_pred -----------cEEEcCCCChhHHHHHHHhhCC
Confidence 1268889999999999999974
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-31 Score=293.84 Aligned_cols=233 Identities=15% Similarity=0.164 Sum_probs=167.8
Q ss_pred EEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCC
Q 001705 750 IVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPW 829 (1024)
Q Consensus 750 llIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~ 829 (1024)
.+|++|+||||+++++.+++.++++|++++++ |+.|+|||||++.++.++++.+++. +++||+||+.|++.+
T Consensus 3 kli~~DlDGTLl~~~~~is~~~~~ai~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~~~~ 74 (266)
T PRK10976 3 QVVASDLDGTLLSPDHTLSPYAKETLKLLTAR----GIHFVFATGRHHVDVGQIRDNLEIK----SYMITSNGARVHDTD 74 (266)
T ss_pred eEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHC----CCEEEEEcCCChHHHHHHHHhcCCC----CeEEEcCCcEEECCC
Confidence 47779999999998889999999999999998 9999999999999999999998873 479999999999743
Q ss_pred CccccCcchhhhhcccCCchhHHHHHhhh----------------------------hhcc-CCCCcccccccCCCCceE
Q 001705 830 RDMVADGDYEAHVEYRWPGENVRSVVPRV----------------------------ARAE-DGAEDDIVGFVDASSSRC 880 (1024)
Q Consensus 830 ~~~~~d~~~~~~i~~~w~~~~v~~~l~~~----------------------------~~~~-~~~~~~~~~~~~~~~~~k 880 (1024)
+.... ...+ ..+.+..++..+ .... .................+
T Consensus 75 ~~~i~----~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~k 146 (266)
T PRK10976 75 GNLIF----SHNL----DRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSK 146 (266)
T ss_pred CCEeh----hhcC----CHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceE
Confidence 32111 0000 011111111100 0000 000000000011123445
Q ss_pred EEEEecCCCchhhHHHHHHHHHhc-CCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChH
Q 001705 881 QSYSIKPGAETRKVDNIRQRLRMR-GFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYE 959 (1024)
Q Consensus 881 ~~~~~~~~~~~~~~~el~~~L~~~-~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~ 959 (1024)
+.+...+. ...+++.+.+... +..+.++.+.+. ++||+|+++|||.||++|++++||++++++|| ||+.| | +
T Consensus 147 i~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~s~~~-~~eI~~~gvsKg~al~~l~~~lgi~~~~viaf-GD~~N-D-i 219 (266)
T PRK10976 147 VFFTCDSH---EKLLPLEQAINARWGDRVNVSFSTLT-CLEVMAGGVSKGHALEAVAKKLGYSLKDCIAF-GDGMN-D-A 219 (266)
T ss_pred EEEEcCCH---HHHHHHHHHHHHHhCCcEEEEEeCCc-eEEEEcCCCChHHHHHHHHHHcCCCHHHeEEE-cCCcc-c-H
Confidence 54443221 2344555555432 345777777775 99999999999999999999999999999998 99999 9 9
Q ss_pred HhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHHhccc
Q 001705 960 DLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAIKI 1023 (1024)
Q Consensus 960 ~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~~~ 1023 (1024)
+||+.+|+||||+ ||.+++|+.|+ ..+||.++++|||+.+|+++.+
T Consensus 220 ~Ml~~ag~~vAm~----NA~~~vK~~A~--------------~~~v~~~n~edGVa~~l~~~~~ 265 (266)
T PRK10976 220 EMLSMAGKGCIMG----NAHQRLKDLLP--------------ELEVIGSNADDAVPHYLRKLYL 265 (266)
T ss_pred HHHHHcCCCeeec----CCcHHHHHhCC--------------CCeecccCchHHHHHHHHHHhh
Confidence 9999999999999 99999999975 1158899999999999999854
|
|
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.8e-29 Score=285.23 Aligned_cols=347 Identities=23% Similarity=0.331 Sum_probs=256.7
Q ss_pred CChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCCeEEEEecCCCCCCccccccCCc
Q 001705 194 TGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWP 273 (1024)
Q Consensus 194 ~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~lwp 273 (1024)
.||...++.+|+++|.+.| |+|++++....... . ....++.++.+|.... .. ..+.
T Consensus 9 ~~g~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~---------~--------~~~~~~~~~~~~~~~~--~~---~~~~ 64 (359)
T cd03808 9 DGGLYSFRLPLIKALRAAG--YEVHVVAPPGDELE---------E--------LEALGVKVIPIPLDRR--GI---NPFK 64 (359)
T ss_pred chhHHHHHHHHHHHHHhcC--CeeEEEecCCCccc---------c--------cccCCceEEecccccc--cc---ChHh
Confidence 5799999999999999999 99999998643221 0 1224778888775431 00 0111
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHc-cCCCCEEEEeCCCchhhhHHHHhcCCCC
Q 001705 274 YIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSG-ALNVPMVLTGHSLGRNKFEQLLKQGRLP 352 (1024)
Q Consensus 274 ~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~-~~~ipiV~t~H~l~~~~~~~l~~~g~~~ 352 (1024)
. +.....+.+.+.+ .+||+||+|......++.+.++ ..+.+++++.|+.+......
T Consensus 65 ---~-----~~~~~~~~~~~~~-------~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-------- 121 (359)
T cd03808 65 ---D-----LKALLRLYRLLRK-------ERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSG-------- 121 (359)
T ss_pred ---H-----HHHHHHHHHHHHh-------cCCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccc--------
Confidence 1 1111222233322 5799999998766666666665 45678899999764432110
Q ss_pred cchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCC
Q 001705 353 KDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFS 432 (1024)
Q Consensus 353 ~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~ 432 (1024)
. ....+++.+ ++..++.+|.+++.|+...+.+...+.. + ...++.++|+|+|..
T Consensus 122 -~--~~~~~~~~~--~~~~~~~~d~ii~~s~~~~~~~~~~~~~--~-------------------~~~~~~~~~~~~~~~ 175 (359)
T cd03808 122 -G--LKRRLYLLL--ERLALRFTDKVIFQNEDDRDLALKLGII--K-------------------KKKTVLIPGSGVDLD 175 (359)
T ss_pred -h--hHHHHHHHH--HHHHHhhccEEEEcCHHHHHHHHHhcCC--C-------------------cCceEEecCCCCChh
Confidence 0 011222332 5667889999999999887765443211 0 012788899999988
Q ss_pred CccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEE
Q 001705 433 YVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMT 512 (1024)
Q Consensus 433 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~ 512 (1024)
.+.+... . ..++++.|+++||+.+.||++.+++++..+.+ ..+++.
T Consensus 176 ~~~~~~~--------------------~------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~--~~~~~~ 221 (359)
T cd03808 176 RFSPSPE--------------------P------------IPEDDPVFLFVARLLKDKGIDELLEAARILKA--KGPNVR 221 (359)
T ss_pred hcCcccc--------------------c------------cCCCCcEEEEEeccccccCHHHHHHHHHHHHh--cCCCeE
Confidence 7654331 0 12567899999999999999999999999853 456676
Q ss_pred E-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHH
Q 001705 513 L-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAA 591 (1024)
Q Consensus 513 L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA 591 (1024)
+ ++|.++...... .. ++...+...+|.|.|+ .+++..+|+.| |++++|+..|+||++++|||+
T Consensus 222 l~i~G~~~~~~~~~--------~~--~~~~~~~~~~v~~~g~--~~~~~~~~~~a----di~i~ps~~e~~~~~~~Ea~~ 285 (359)
T cd03808 222 LLLVGDGDEENPAA--------IL--EIEKLGLEGRVEFLGF--RDDVPELLAAA----DVFVLPSYREGLPRVLLEAMA 285 (359)
T ss_pred EEEEcCCCcchhhH--------HH--HHHhcCCcceEEEeec--cccHHHHHHhc----cEEEecCcccCcchHHHHHHH
Confidence 6 677765432211 10 3566777889999999 78999999999 999999999999999999999
Q ss_pred cCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHH
Q 001705 592 YGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYL 663 (1024)
Q Consensus 592 ~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l 663 (1024)
||+|||+|+.|+..+++.++.+|++++++|+++++++|.+++.+++.+.++++++++.+ ++|||+.++++|+
T Consensus 286 ~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 286 MGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDPELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred cCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 99999999999999999989999999999999999999999999999999999999997 7999999999876
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.4e-31 Score=295.52 Aligned_cols=234 Identities=12% Similarity=0.079 Sum_probs=168.1
Q ss_pred eEEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcC
Q 001705 749 LIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFP 828 (1024)
Q Consensus 749 lllIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~ 828 (1024)
+.+|++|+||||+++++.+++.++++|++++++ |+.|+|||||++.++.++++++++.. ..+++||+||+.|++.
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~~-~~~~~I~~NGa~i~~~ 77 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDHTISPAVKQAIAAARAK----GVNVVLTTGRPYAGVHRYLKELHMEQ-PGDYCITNNGALVQKA 77 (270)
T ss_pred eEEEEEecCCcCcCCCCccCHHHHHHHHHHHHC----CCEEEEecCCChHHHHHHHHHhCCCC-CCCeEEEcCCeEEEEC
Confidence 457789999999998889999999999999998 99999999999999999999988742 1358999999999963
Q ss_pred -CCccccCcchhhhhcccCCchhHHHHHhh----------------------------hhhccCCCCcc--ccccc-CCC
Q 001705 829 -WRDMVADGDYEAHVEYRWPGENVRSVVPR----------------------------VARAEDGAEDD--IVGFV-DAS 876 (1024)
Q Consensus 829 -~~~~~~d~~~~~~i~~~w~~~~v~~~l~~----------------------------~~~~~~~~~~~--~~~~~-~~~ 876 (1024)
++... +...+. .+.+..++.. ........... ..... ...
T Consensus 78 ~~~~~i----~~~~l~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (270)
T PRK10513 78 ADGETV----AQTALS----YDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNL 149 (270)
T ss_pred CCCCEE----EecCCC----HHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccC
Confidence 22211 000000 0000000000 00000000000 00000 011
Q ss_pred CceEEEEEecCCCchhhHHHHHHHHHh-cCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCC
Q 001705 877 SSRCQSYSIKPGAETRKVDNIRQRLRM-RGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGD 955 (1024)
Q Consensus 877 ~~~k~~~~~~~~~~~~~~~el~~~L~~-~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N 955 (1024)
...++... .+. ..++++.+.+.. ....+.++.+.+. ++||+|+++|||+||++|++++||+++++++| ||+.|
T Consensus 150 ~~~k~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~s~~~-~~eI~~~gvsKg~al~~l~~~~gi~~~~v~af-GD~~N 223 (270)
T PRK10513 150 QFPKVMMI-DEP---EILDAAIARIPAEVKERYTVLKSAPY-FLEILDKRVNKGTGVKSLAEHLGIKPEEVMAI-GDQEN 223 (270)
T ss_pred CceEEEEe-CCH---HHHHHHHHHhHHHhcCcEEEEEecCe-eEEEeCCCCChHHHHHHHHHHhCCCHHHEEEE-CCchh
Confidence 23444433 211 233444444432 2345777778775 99999999999999999999999999999998 99999
Q ss_pred CChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHHhccc
Q 001705 956 TDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAIKI 1023 (1024)
Q Consensus 956 ~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~~~ 1023 (1024)
| ++||+.+|+||||+ ||.+++|+.|+ +||.++++|||+.+|+++.+
T Consensus 224 -D-i~Ml~~ag~~vAm~----NA~~~vK~~A~----------------~vt~~n~~dGva~~i~~~~~ 269 (270)
T PRK10513 224 -D-IAMIEYAGVGVAMG----NAIPSVKEVAQ----------------FVTKSNLEDGVAFAIEKYVL 269 (270)
T ss_pred -h-HHHHHhCCceEEec----CccHHHHHhcC----------------eeccCCCcchHHHHHHHHhc
Confidence 9 99999999999999 99999999999 99999999999999999854
|
|
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=285.80 Aligned_cols=362 Identities=28% Similarity=0.366 Sum_probs=259.3
Q ss_pred CChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCCeEEEEecCCCCCCccccccCCc
Q 001705 194 TGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWP 273 (1024)
Q Consensus 194 ~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~lwp 273 (1024)
.||.+.++..++++|.+.| |+|++++.....+....... .......+.. .........+
T Consensus 13 ~~g~~~~~~~~~~~l~~~g--~~v~v~~~~~~~~~~~~~~~----------------~~~~~~~~~~---~~~~~~~~~~ 71 (377)
T cd03798 13 NGGGGIFVKELARALAKRG--VEVTVLAPGPWGPKLLDLLK----------------GRLVGVERLP---VLLPVVPLLK 71 (377)
T ss_pred CchHHHHHHHHHHHHHHCC--CceEEEecCCCCCCchhhcc----------------cccccccccc---cCcchhhccc
Confidence 7999999999999999999 99999998654322110000 0000000000 0000000000
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC-ChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCC
Q 001705 274 YIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYA-DAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLP 352 (1024)
Q Consensus 274 ~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~-~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~ 352 (1024)
... ........+.+.+.. ...+||+||+|+. ....++..+.+..++|++++.|+........
T Consensus 72 ~~~----~~~~~~~~~~~~l~~-----~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~-------- 134 (377)
T cd03798 72 GPL----LYLLAARALLKLLKL-----KRFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPR-------- 134 (377)
T ss_pred cch----hHHHHHHHHHHHHhc-----ccCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCc--------
Confidence 000 011111122222220 1157999999975 4566677777778899999999864432110
Q ss_pred cchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCC
Q 001705 353 KDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFS 432 (1024)
Q Consensus 353 ~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~ 432 (1024)
+...+. .++..+..+|.+++.|+...+.+...+ + +..++.++|||+|..
T Consensus 135 ------~~~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~--~---------------------~~~~~~~i~~~~~~~ 183 (377)
T cd03798 135 ------KRLLRA--LLRRALRRADAVIAVSEALADELKALG--I---------------------DPEKVTVIPNGVDTE 183 (377)
T ss_pred ------hhhHHH--HHHHHHhcCCeEEeCCHHHHHHHHHhc--C---------------------CCCceEEcCCCcCcc
Confidence 001122 255678999999999998877754432 1 113899999999998
Q ss_pred CccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEE
Q 001705 433 YVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMT 512 (1024)
Q Consensus 433 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~ 512 (1024)
.+.+... . . ..+.....+++.|+++|++.+.||++.+++++..+.. ..+++.
T Consensus 184 ~~~~~~~----------------------~--~--~~~~~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~--~~~~~~ 235 (377)
T cd03798 184 RFSPADR----------------------A--E--ARKLGLPEDKKVILFVGRLVPRKGIDYLIEALARLLK--KRPDVH 235 (377)
T ss_pred cCCCcch----------------------H--H--HHhccCCCCceEEEEeccCccccCHHHHHHHHHHHHh--cCCCeE
Confidence 7755431 0 0 0111223567899999999999999999999999853 356777
Q ss_pred E-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHH
Q 001705 513 L-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAA 591 (1024)
Q Consensus 513 L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA 591 (1024)
+ ++|.++. ...+...++++++.++|.+.|+++.+++..+|+.| |++++|+..|+||++++|||+
T Consensus 236 l~i~g~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a----d~~i~~~~~~~~~~~~~Ea~~ 300 (377)
T cd03798 236 LVIVGDGPL-----------REALEALAAELGLEDRVTFLGAVPHEEVPAYYAAA----DVFVLPSLREGFGLVLLEAMA 300 (377)
T ss_pred EEEEcCCcc-----------hHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhc----CeeecchhhccCChHHHHHHh
Confidence 6 6676653 23455677788888999999999999999999999 999999999999999999999
Q ss_pred cCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001705 592 YGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYLSHVEHS 669 (1024)
Q Consensus 592 ~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~ 669 (1024)
||+|||+++.|+..+++.++.+|++++++|+++++++|.+++++++. ++..++++.+ +.|+|+.+++++.+.|+++
T Consensus 301 ~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 301 CGLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWL--RLGRAARRRVAERFSWENVAERLLELYREV 377 (377)
T ss_pred cCCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999887 6777777777 7999999999999998753
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-29 Score=285.69 Aligned_cols=355 Identities=23% Similarity=0.285 Sum_probs=245.2
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++|+.. ++ +..+||.++++.+|+++|.++| |+|++++.......... ...
T Consensus 1 kIl~i~~~---------~~-~~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~~----------------~~~ 52 (359)
T cd03823 1 RILVVNHL---------YP-PRSVGGAEVVAHDLAEALAKRG--HEVAVLTAGEDPPRQDK----------------EVI 52 (359)
T ss_pred CeeEEccc---------CC-cccccchHHHHHHHHHHHHhcC--CceEEEeCCCCCCCccc----------------ccc
Confidence 68999966 34 4568999999999999999999 99999988643221100 001
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCh-HHHHHHHHccCCCC
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADA-GEVAAHLSGALNVP 329 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~-~~~a~~l~~~~~ip 329 (1024)
+..+...+.............+..... ........+.+.+.+ .+||+||+|.... +.......+..++|
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-------~~~dii~~~~~~~~~~~~~~~~~~~~~~ 122 (359)
T cd03823 53 GVVVYGRPIDEVLRSALPRDLFHLSDY---DNPAVVAEFARLLED-------FRPDVVHFHHLQGLGVSILRAARDRGIP 122 (359)
T ss_pred cceeeccccccccCCCchhhhhHHHhc---cCHHHHHHHHHHHHH-------cCCCEEEECCccchHHHHHHHHHhcCCC
Confidence 222222110000000000000000000 000111112222222 5799999998632 23333445566899
Q ss_pred EEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh
Q 001705 330 MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409 (1024)
Q Consensus 330 iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~ 409 (1024)
++++.|+.+..... . .......|.++++|+...+.+...+.
T Consensus 123 ~i~~~hd~~~~~~~-------------------~-----~~~~~~~d~ii~~s~~~~~~~~~~~~--------------- 163 (359)
T cd03823 123 IVLTLHDYWLICPR-------------------Q-----GLFKKGGDAVIAPSRFLLDRYVANGL--------------- 163 (359)
T ss_pred EEEEEeeeeeecch-------------------h-----hhhccCCCEEEEeCHHHHHHHHHcCC---------------
Confidence 99999976332100 0 00122339999999877766433221
Q ss_pred cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCC
Q 001705 410 RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPK 489 (1024)
Q Consensus 410 ~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~ 489 (1024)
...++.+||||+|...+.+... ....+++.|+++||+.+.
T Consensus 164 --------~~~~~~vi~n~~~~~~~~~~~~--------------------------------~~~~~~~~i~~~G~~~~~ 203 (359)
T cd03823 164 --------FAEKISVIRNGIDLDRAKRPRR--------------------------------APPGGRLRFGFIGQLTPH 203 (359)
T ss_pred --------CccceEEecCCcChhhcccccc--------------------------------CCCCCceEEEEEecCccc
Confidence 1128999999999887643320 012457789999999999
Q ss_pred CCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhc
Q 001705 490 KNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 568 (1024)
Q Consensus 490 Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~ 568 (1024)
||++.+++++..+.. +++.+ ++|.++..... .... +...+|.+.|+++.+++..+|+.|
T Consensus 204 k~~~~li~~~~~l~~----~~~~l~i~G~~~~~~~~-----------~~~~---~~~~~v~~~g~~~~~~~~~~~~~a-- 263 (359)
T cd03823 204 KGVDLLLEAFKRLPR----GDIELVIVGNGLELEEE-----------SYEL---EGDPRVEFLGAYPQEEIDDFYAEI-- 263 (359)
T ss_pred cCHHHHHHHHHHHHh----cCcEEEEEcCchhhhHH-----------HHhh---cCCCeEEEeCCCCHHHHHHHHHhC--
Confidence 999999999999853 45555 77877542221 1111 556789999999999999999999
Q ss_pred CCcEEEecCC-CCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 001705 569 TKGVFINPAL-VEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGL 647 (1024)
Q Consensus 569 ~~dv~v~ps~-~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~ 647 (1024)
|++++||. .|+||++++||||||+|||+|+.|+..|++.++.+|++++++|.++++++|.+++++++.+++++++++
T Consensus 264 --d~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~ 341 (359)
T cd03823 264 --DVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDPDLLERLRAGIE 341 (359)
T ss_pred --CEEEEcCcccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhChHHHHHHHHhHH
Confidence 99999997 799999999999999999999999999999998899999999999999999999999999999999988
Q ss_pred HHHhcCCHHHHHHHHHHHHH
Q 001705 648 KNIHRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 648 ~~~~~fsw~~~a~~~l~~~~ 667 (1024)
+.... +.++++|++.|+
T Consensus 342 ~~~~~---~~~~~~~~~~~~ 358 (359)
T cd03823 342 PPRSI---EDQAEEYLKLYR 358 (359)
T ss_pred HhhhH---HHHHHHHHHHhh
Confidence 87643 888888888875
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=302.38 Aligned_cols=346 Identities=18% Similarity=0.204 Sum_probs=279.7
Q ss_pred CccccccCCcchHHHHHH----------HHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccC-CCCEEE
Q 001705 264 KYIAKESLWPYIHEFVDG----------ALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGAL-NVPMVL 332 (1024)
Q Consensus 264 ~~~~k~~lwp~~~~f~~~----------~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~-~ipiV~ 332 (1024)
..++++.|||.+|+|... ....++.|++.+.+.++.| |+||+|++++.++|.+++++. ..+++|
T Consensus 102 ~~fsn~iLWP~~Hy~~~~~~~~~~~w~~Y~~vN~~FAd~i~~~~~~g-----DiIWVhDYhL~L~P~mlR~~~~~~~Igf 176 (486)
T COG0380 102 NGFSNAILWPLFHYFIDDVAYERNWWDAYVKVNRKFADKIVEIYEPG-----DIIWVHDYHLLLVPQMLRERIPDAKIGF 176 (486)
T ss_pred HHhhHhhhcceeeeecCccccchHHHHHHHHHHHHHHHHHHHhcCCC-----CEEEEEechhhhhHHHHHHhCCCceEEE
Confidence 467899999999977653 3344577889999988887 999999999999999999876 578999
Q ss_pred EeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhh---cCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh
Q 001705 333 TGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLD---ASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409 (1024)
Q Consensus 333 t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~---~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~ 409 (1024)
++| .++++-.+++.+++++.+++ +||+|.++|..++++ |...++++++....
T Consensus 177 FlH------------------iPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~n-------F~~~~~r~~~~~~~ 231 (486)
T COG0380 177 FLH------------------IPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARN-------FLDLCSRLLGVTGD 231 (486)
T ss_pred EEe------------------CCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHH-------HHHHHHHhcccccc
Confidence 999 66677788899998887776 999999999999998 77778888874433
Q ss_pred cCccccC--CCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCC
Q 001705 410 RGVSCFG--RFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPD 487 (1024)
Q Consensus 410 ~g~~~~g--~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld 487 (1024)
.++..-| .+..++..+|.|||+..|..... .......+.++.+... .++++|+.++|+|
T Consensus 232 ~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~------------------~~~v~~~~~el~~~~~-~~~kiivgvDRlD 292 (486)
T COG0380 232 ADIRFNGADGRIVKVGAFPIGIDPEEFERALK------------------SPSVQEKVLELKAELG-RNKKLIVGVDRLD 292 (486)
T ss_pred ccccccccCCceEEEEEEeeecCHHHHHHhhc------------------CCchhhHHHHHHHHhc-CCceEEEEehhcc
Confidence 4444332 45558999999999988865431 1111123444444443 2389999999999
Q ss_pred CCCCHHHHHHHHhhccccCCCC----cEEEEE------ecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCC
Q 001705 488 PKKNVTTLLKAFGECQPLRELA----NMTLIL------GNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQS 557 (1024)
Q Consensus 488 ~~Kgi~~ll~A~~~l~~l~~~~----~l~LIv------G~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~ 557 (1024)
+.||+...+.||++|. ..+| +++++. ++.+.|+.+.....+.+++|++.++..++.+..+|...++++
T Consensus 293 y~kGi~~rl~Afe~lL--~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~ 370 (486)
T COG0380 293 YSKGIPQRLLAFERLL--EEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRN 370 (486)
T ss_pred cccCcHHHHHHHHHHH--HhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHH
Confidence 9999999999999994 5566 344422 344445557778888999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc-----CCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHH
Q 001705 558 DVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAY-----GLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKL 632 (1024)
Q Consensus 558 el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~-----G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~l 632 (1024)
++.++|+.| |+++++|++|||+||++|+.|| |..|++..+|+..++ ..+++|||+|.+++|++|.++
T Consensus 371 ~l~al~~~a----Dv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L----~~AliVNP~d~~~va~ai~~A 442 (486)
T COG0380 371 ELLALYRAA----DVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASEL----RDALIVNPWDTKEVADAIKRA 442 (486)
T ss_pred HHHHHHhhh----ceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhh----ccCEeECCCChHHHHHHHHHH
Confidence 999999999 9999999999999999999999 888888889998888 459999999999999999999
Q ss_pred HhCHHHHHHHH-HHHHHHHhcCCHHHHHHHHHHHHHH
Q 001705 633 LADKNMWSECR-KNGLKNIHRFSWPEHCRNYLSHVEH 668 (1024)
Q Consensus 633 l~d~~~~~~~~-~~~~~~~~~fsw~~~a~~~l~~~~~ 668 (1024)
|+++.+.++.+ +..++.+..++...|+..|+..+..
T Consensus 443 L~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 443 LTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQ 479 (486)
T ss_pred hcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 99765555444 4555556899999999999999886
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-31 Score=289.04 Aligned_cols=231 Identities=16% Similarity=0.199 Sum_probs=165.7
Q ss_pred eEEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcC
Q 001705 749 LIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFP 828 (1024)
Q Consensus 749 lllIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~ 828 (1024)
+.+|++|+||||+++++.+++.++++|++++++ |+.|+|||||++..+.++++++++. .++||+||+.|++.
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~al~~~~~~----g~~v~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~~~ 74 (264)
T COG0561 3 IKLLAFDLDGTLLDSNKTISPETKEALARLREK----GVKVVLATGRPLPDVLSILEELGLD----GPLITFNGALIYNG 74 (264)
T ss_pred eeEEEEcCCCCccCCCCccCHHHHHHHHHHHHC----CCEEEEECCCChHHHHHHHHHcCCC----ccEEEeCCeEEecC
Confidence 457789999999999888999999999999998 9999999999999999999998884 27999999999997
Q ss_pred CCccccCcchhhhhcccCCchhHHHHHhhhhhc------cCCCCcc--cc-------------------cccCCCCceEE
Q 001705 829 WRDMVADGDYEAHVEYRWPGENVRSVVPRVARA------EDGAEDD--IV-------------------GFVDASSSRCQ 881 (1024)
Q Consensus 829 ~~~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~------~~~~~~~--~~-------------------~~~~~~~~~k~ 881 (1024)
+.... .. .+..+.+..++...... ....... .. .........++
T Consensus 75 -~~~i~----~~----~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (264)
T COG0561 75 -GELLF----QK----PLSREDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKI 145 (264)
T ss_pred -CcEEe----ee----cCCHHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceE
Confidence 32221 11 11112222222211100 0000000 00 00000000111
Q ss_pred EEEecCCCchhhHHHHHHHHHhcCC--eEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChH
Q 001705 882 SYSIKPGAETRKVDNIRQRLRMRGF--RCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYE 959 (1024)
Q Consensus 882 ~~~~~~~~~~~~~~el~~~L~~~~~--~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~ 959 (1024)
..... ......++.+.+..... ...+..+... ++||+|+++|||.||++|++++|++++++||| ||+.| | +
T Consensus 146 ~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~s~~~-~lei~~~g~~K~~al~~l~~~lgi~~~~v~af-GD~~N-D-~ 218 (264)
T COG0561 146 IALDK---DHEILEELVEALRKRFPDLGLTVSSSGPI-SLDITPKGVSKGYALQRLAKLLGIKLEEVIAF-GDSTN-D-I 218 (264)
T ss_pred EEEec---ChHhHHHHHHHHhhhccccceEEEEcCCc-eEEEecCCCchHHHHHHHHHHhCCCHHHeEEe-CCccc-c-H
Confidence 11111 12234555555654422 2334444443 69999999999999999999999999999998 99999 9 9
Q ss_pred HhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHHhccc
Q 001705 960 DLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAIKI 1023 (1024)
Q Consensus 960 ~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~~~ 1023 (1024)
+||+.+|+||||+ ||.+++|+.|+ ++|.+++++||+++|+++..
T Consensus 219 ~Ml~~ag~gvam~----Na~~~~k~~A~----------------~vt~~n~~~Gv~~~l~~~~~ 262 (264)
T COG0561 219 EMLEVAGLGVAMG----NADEELKELAD----------------YVTTSNDEDGVAEALEKLLL 262 (264)
T ss_pred HHHHhcCeeeecc----CCCHHHHhhCC----------------cccCCccchHHHHHHHHHhc
Confidence 9999999999999 99999999999 89999999999999999864
|
|
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-31 Score=310.05 Aligned_cols=360 Identities=17% Similarity=0.155 Sum_probs=245.5
Q ss_pred CCCeEEEEecCCCC-----CCccccccCCcchHHHHH--------------HHHHHHHHHHHHHHhhhcCCCCCcceEEE
Q 001705 249 SCGAYIIRIPCGAR-----DKYIAKESLWPYIHEFVD--------------GALNHIVNMARAIGEQVNGGKPTWPYVIH 309 (1024)
Q Consensus 249 ~~gv~i~rip~~~~-----~~~~~k~~lwp~~~~f~~--------------~~l~~~~~~~~~l~~~~~~g~~~~pDvIh 309 (1024)
.++..++.++..+. ..++++..|||.+|++.+ .....++.|++.+.+.+.+| |+||
T Consensus 72 ~~~~~~~pV~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~-----D~VW 146 (474)
T PF00982_consen 72 LDEYNCVPVFLSPEEYDGYYNGFCNQVLWPLFHYRLDSRPDLARFEEEWWEAYKRVNRRFADAIAEVYRPG-----DLVW 146 (474)
T ss_dssp ETTEEEEEEEE-HHHHHHHTTTHHHHTHHHHHTT-GG----G----HHHHHHHHHHHHHHHHHHGGG--TT------EEE
T ss_pred ccCceEEEEEcCHHHHHHHHHhhhhhccCcccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhCcCC-----CEEE
Confidence 34666666664321 256889999998884322 22334477889999988876 9999
Q ss_pred EcCCChHHHHHHHHccC-CCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhh---cCCEEEeCCHHH
Q 001705 310 GHYADAGEVAAHLSGAL-NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLD---ASEMVVTSTRQE 385 (1024)
Q Consensus 310 ~h~~~~~~~a~~l~~~~-~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~---~Ad~Vi~~S~~~ 385 (1024)
+|++++.+++.+++++. +.+++|++| .+++...+++.+++.+.+++ .||+|.++|..+
T Consensus 147 VhDYhL~llP~~LR~~~~~~~IgfFlH------------------iPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~ 208 (474)
T PF00982_consen 147 VHDYHLMLLPQMLRERGPDARIGFFLH------------------IPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEY 208 (474)
T ss_dssp EESGGGTTHHHHHHHTT--SEEEEEE-------------------S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHH
T ss_pred EeCCcHHHHHHHHHhhcCCceEeeEEe------------------cCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHH
Confidence 99999999999999876 789999999 77888889999888777776 999999999999
Q ss_pred HHHHHhcccCcchHHHHHHHHhhhcC--ccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCc
Q 001705 386 IEMQWGLYDGFDLKLERKLRVRRQRG--VSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPP 463 (1024)
Q Consensus 386 ~~~~~~~~~~f~~~~~r~l~~~~~~g--~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 463 (1024)
+++ |...+.++++...... ...++.+..++.++|.|||++.|..... ......
T Consensus 209 ~~n-------Fl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~------------------~~~v~~ 263 (474)
T PF00982_consen 209 ARN-------FLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLAR------------------SPEVQE 263 (474)
T ss_dssp HHH-------HHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-------------------S---H
T ss_pred HHH-------HHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhcc------------------ChHHHH
Confidence 998 7888889988776654 4445555569999999999988754321 011122
Q ss_pred chHHHhhhhCCCC-CcEEEEEeCCCCCCCHHHHHHHHhhccccCCCC----cEEEE---E---ecCCCcccccccchHHH
Q 001705 464 MWSEVMRFFTNPH-KPTILALSRPDPKKNVTTLLKAFGECQPLRELA----NMTLI---L---GNRDDIEDMSNSSSVVL 532 (1024)
Q Consensus 464 ~~~~~~~~~~~~~-~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~----~l~LI---v---G~~~~~~~l~~~~~~~~ 532 (1024)
....++..+ .+ .++|+.++|+|+.||+...++||+++. ..+| +++|+ + .+.++|+++..+..+..
T Consensus 264 ~~~~l~~~~--~~~~~ii~gvDrld~~kGi~~kl~Afe~fL--~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v 339 (474)
T PF00982_consen 264 RAEELREKF--KGKRKIIVGVDRLDYTKGIPEKLRAFERFL--ERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELV 339 (474)
T ss_dssp HHHHHHHHT--TT-SEEEEEE--B-GGG-HHHHHHHHHHHH--HH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhc--CCCcEEEEEeccchhhcCHHHHHHHHHHHH--HhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHH
Confidence 222333332 34 589999999999999999999999994 4444 35443 2 33344667888888999
Q ss_pred HHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc-----CCcEEEcCCCCchhh
Q 001705 533 TTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAY-----GLPVVATKNGGPVDI 607 (1024)
Q Consensus 533 ~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~-----G~PVVat~~Gg~~ei 607 (1024)
++|+....+.++.+.+++.+.++.+++.++|+.| ||+++||++|||+|+++||.|| |+.|++..+|+..++
T Consensus 340 ~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~a----Dv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L 415 (474)
T PF00982_consen 340 GRINGKYGTPDWTPIIYIYRSLSFEELLALYRAA----DVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQL 415 (474)
T ss_dssp HHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-----SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT-
T ss_pred HHHHhhcccCCceeEEEEecCCCHHHHHHHHHhh----hhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHc
Confidence 9999999999999999999999999999999999 9999999999999999999999 667777878887666
Q ss_pred hccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHH-HHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 001705 608 LKALNNGLLVDPHDQNAIADALLKLLADKNMWS-ECRKNGLKNIHRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 608 i~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~-~~~~~~~~~~~~fsw~~~a~~~l~~~~ 667 (1024)
- ..+++|||+|++++|+||.++|+++...+ +..+..++.+..++...|++.|++.++
T Consensus 416 ~---~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~ 473 (474)
T PF00982_consen 416 S---EAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDLK 473 (474)
T ss_dssp T---TS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHH
T ss_pred C---CccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhh
Confidence 1 23599999999999999999999876544 444455666799999999999998876
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-28 Score=285.10 Aligned_cols=276 Identities=20% Similarity=0.270 Sum_probs=216.1
Q ss_pred CcceEEEEcCCC-hHHHHHHHHccCCCC-EEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEe
Q 001705 303 TWPYVIHGHYAD-AGEVAAHLSGALNVP-MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVT 380 (1024)
Q Consensus 303 ~~pDvIh~h~~~-~~~~a~~l~~~~~ip-iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~ 380 (1024)
..+|++|+++.. .+..+.++.+..+.+ +|.+.|+.... +. .. ...+ +...+.+++.+|.|++
T Consensus 126 ~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~--~~-----~~----~~~~-----~~~~~~~~~~~d~ii~ 189 (407)
T cd04946 126 GQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLY--ED-----RY----PSGY-----IPLRRYLLSSLDAVFP 189 (407)
T ss_pred cCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhh--hh-----hc----cccc-----hHHHHHHHhcCCEEEE
Confidence 467899997654 344455566666665 99999975211 10 00 0011 1123446889999999
Q ss_pred CCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCC
Q 001705 381 STRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRN 460 (1024)
Q Consensus 381 ~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1024)
+|+...+.+...|+. ...++.++|+|++...+.+..
T Consensus 190 ~S~~~~~~l~~~~~~----------------------~~~ki~vi~~gv~~~~~~~~~---------------------- 225 (407)
T cd04946 190 CSEQGRNYLQKRYPA----------------------YKEKIKVSYLGVSDPGIISKP---------------------- 225 (407)
T ss_pred CCHHHHHHHHHHCCC----------------------ccccEEEEECCcccccccCCC----------------------
Confidence 999888876555432 223889999999987653321
Q ss_pred CCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHH
Q 001705 461 LPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLI 539 (1024)
Q Consensus 461 ~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i 539 (1024)
...+.+.|+++||+.+.||++.+++|+..+....+..++.+ ++|+++. ...+.+++
T Consensus 226 ------------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~-----------~~~l~~~~ 282 (407)
T cd04946 226 ------------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL-----------EDTLKELA 282 (407)
T ss_pred ------------CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH-----------HHHHHHHH
Confidence 01356789999999999999999999999964332335554 6787764 34566777
Q ss_pred HHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCC
Q 001705 540 DKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDP 619 (1024)
Q Consensus 540 ~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p 619 (1024)
...+..++|.|+|+++.+++..+|+.+ .+|+|++||..||||++++||||||+|||+|+.||..|++.++.+|+++++
T Consensus 283 ~~~~~~~~V~f~G~v~~~e~~~~~~~~--~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~ 360 (407)
T cd04946 283 ESKPENISVNFTGELSNSEVYKLYKEN--PVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSK 360 (407)
T ss_pred HhcCCCceEEEecCCChHHHHHHHhhc--CCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCC
Confidence 777888899999999999999999873 128999999999999999999999999999999999999999989999987
Q ss_pred C-CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHH
Q 001705 620 H-DQNAIADALLKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYL 663 (1024)
Q Consensus 620 ~-d~~~la~aI~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l 663 (1024)
. |+++++++|.++++||+++++++++|++.+ ++|||+...++|.
T Consensus 361 ~~~~~~la~~I~~ll~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 361 DPTPNELVSSLSKFIDNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 4 899999999999999999999999999999 6999999998885
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-30 Score=276.36 Aligned_cols=221 Identities=20% Similarity=0.235 Sum_probs=161.7
Q ss_pred EEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCCc
Q 001705 752 IAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRD 831 (1024)
Q Consensus 752 Ia~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~~ 831 (1024)
|++|+||||+++++.+++.++++|+++++. |+.|++||||++.++.++++.+++ ++++||+||+.|++.++
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~----Gi~~~~aTGR~~~~~~~~~~~l~~----~~~~i~~nGa~i~~~~~- 71 (225)
T TIGR01482 1 IASDIDGTLTDPNRAINESALEAIRKAESV----GIPVVLVTGNSVQFARALAKLIGT----PDPVIAENGGEISYNEG- 71 (225)
T ss_pred CeEeccCccCCCCcccCHHHHHHHHHHHHC----CCEEEEEcCCchHHHHHHHHHhCC----CCeEEEecCcEEEeCCC-
Confidence 469999999998888999999999999987 999999999999999999999886 56899999999998521
Q ss_pred cccCcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEEE
Q 001705 832 MVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLV 911 (1024)
Q Consensus 832 ~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v~ 911 (1024)
....|...+...|....+......+.. ...+.......+++.+.. + . +.+...+...+..+.+.
T Consensus 72 --~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-~---~---~~~~~~~~~~~~~~~~~ 135 (225)
T TIGR01482 72 --MDDIFLAYLEEEWFLDIVIAKTFPFSR-------LKVQYPRRASLVKMRYGI-D---V---DTVREIIKELGLNLVAV 135 (225)
T ss_pred --CceEEecccCHHHHHHHHHhcccchhh-------hccccccccceEEEeecC-C---H---HHHHHHHHhcCceEEEe
Confidence 112233323222221111111000000 011111112223332221 1 1 22333333333334333
Q ss_pred EecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCCC
Q 001705 912 YTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKR 991 (1024)
Q Consensus 912 ~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~ 991 (1024)
+... ++||+|+++|||.||++|++++|++++++++| ||+.| | ++||+.+|+||||+ ||.+++|+.|+
T Consensus 136 -~~~~-~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~-GD~~N-D-i~m~~~ag~~vam~----Na~~~~k~~A~---- 202 (225)
T TIGR01482 136 -DSGF-DIHILPQGVNKGVAVKKLKEKLGIKPGETLVC-GDSEN-D-IDLFEVPGFGVAVA----NAQPELKEWAD---- 202 (225)
T ss_pred -cCCc-EEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEE-CCCHh-h-HHHHHhcCceEEcC----ChhHHHHHhcC----
Confidence 4454 99999999999999999999999999999998 99999 9 99999999999999 99999999999
Q ss_pred CCccCCCCCCeeEeccccChhH----HHHHHHhcc
Q 001705 992 EDVVPPDSPNIAYIEESYEPQD----LSAALKAIK 1022 (1024)
Q Consensus 992 ~~v~~~~~~~~~~vt~~~~~dg----I~~aL~~~~ 1022 (1024)
+||.++.++| |+.+|++||
T Consensus 203 ------------~vt~~~~~~G~~~~v~~~l~~~~ 225 (225)
T TIGR01482 203 ------------YVTESPYGEGGAEAIGEILQAIG 225 (225)
T ss_pred ------------eecCCCCCCcHHHHHHHHHHhhC
Confidence 9999999999 999999987
|
catalyze the same reaction as SPP. |
| >PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=290.58 Aligned_cols=248 Identities=33% Similarity=0.520 Sum_probs=177.1
Q ss_pred CCceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCC-------C---ceEEEEEecCCCCCCCCcccCCC
Q 001705 167 SRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTE-------G---VYRVDLLTRQIASPEVDSSYGEP 236 (1024)
Q Consensus 167 ~~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g-------~---v~~V~vlt~~~~~p~~~~~y~~~ 236 (1024)
+|-.+|++||+||+++++|| +|| ||||||+.||+++++||.+.+ | .-+|.++||.+.+.. ...+.++
T Consensus 270 Pmvf~vvliSpHG~f~q~nv-LG~-pDTGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd~~-~t~~~q~ 346 (550)
T PF00862_consen 270 PMVFNVVLISPHGYFGQENV-LGR-PDTGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPDAK-GTTCNQR 346 (550)
T ss_dssp ---SEEEEE--SS--STTST-TSS-TTSSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TBTT-CGGGTSS
T ss_pred ceeEEEEEEcCccccccccc-cCC-CCCCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccCCc-CCCcccc
Confidence 46679999999999999999 998 999999999999999998753 1 136999999987643 3355667
Q ss_pred ccccCCCCCCCCCCCeEEEEecCCCC----CCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcC
Q 001705 237 NEMLSCPSDGTGSCGAYIIRIPCGAR----DKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHY 312 (1024)
Q Consensus 237 ~e~l~~~~~~~~~~gv~i~rip~~~~----~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~ 312 (1024)
.+.+ ...++++|+|+||++. ++|++++.+|||+..|++.+...+.+- + ..+||+||+||
T Consensus 347 le~~------~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e---~--------~~~PdlI~GnY 409 (550)
T PF00862_consen 347 LEKV------SGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAE---L--------QGKPDLIIGNY 409 (550)
T ss_dssp EEEE------TTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHH---H--------TS--SEEEEEH
T ss_pred cccc------CCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHH---h--------CCCCcEEEecc
Confidence 6665 4567999999999996 479999999999999999887765431 1 24899999999
Q ss_pred CChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhc
Q 001705 313 ADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGL 392 (1024)
Q Consensus 313 ~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~ 392 (1024)
.+.+++|.++++++|+|++++.|+++..|++ ..+..++++...|+++++|.+|..+++.||.|||+|.+|+..++..
T Consensus 410 sDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~---~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI~g~~~~ 486 (550)
T PF00862_consen 410 SDGNLVASLLSRKLGVTQCFIAHSLEKTKYE---DSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEIAGQKDT 486 (550)
T ss_dssp HHHHHHHHHHHHHHT-EEEEE-SS-HHHHHH---TTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHHHB-SSS
T ss_pred CcchHHHHHHHhhcCCceehhhhcccccccc---ccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhhcCCccc
Confidence 9999999999999999999999999999876 3455566999999999999999999999999999999999998887
Q ss_pred ccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccC
Q 001705 393 YDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQD 438 (1024)
Q Consensus 393 ~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~ 438 (1024)
++.|..-....+.. ..+.+++.+.+.||+.++|||+|.+.|.|-.
T Consensus 487 ~gqyes~~~ftlpg-Lyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt 531 (550)
T PF00862_consen 487 VGQYESHKAFTLPG-LYRVVNGIDVFDPKFNIVSPGADESIYFPYT 531 (550)
T ss_dssp BHTTGGGSSEEETT-TEEEEES--TT-TTEEE------TTTS--TT
T ss_pred cCCccchhhcchHh-HHhhhccccccCCcccccCCCCCcceecCCc
Confidence 77666531111111 3467888899999999999999999998876
|
4.1.13 from EC in the following reaction: |
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-28 Score=292.36 Aligned_cols=538 Identities=16% Similarity=0.150 Sum_probs=381.4
Q ss_pred HHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccC-CCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHH
Q 001705 287 VNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGAL-NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRI 365 (1024)
Q Consensus 287 ~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~-~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i 365 (1024)
..+++.+.+.+++| |+||+|+++...++.+++... .+.+.++.|+ .++..++++.+
T Consensus 128 ~~f~d~ive~~~~~-----d~vwihdyhlmllp~~lr~~~~~~~ig~flhs------------------pfpssEi~r~l 184 (732)
T KOG1050|consen 128 QAFADKIVEVYEEG-----DIVWIHDYHLMLLPQMLRERFNSAKIGFFLHS------------------PFPSSEIYRCL 184 (732)
T ss_pred HHHHHHHHHhccCC-----CcEEEEcchhhccchhhhcccccceEEEeccC------------------CCChHHHHHhc
Confidence 55666677766654 999999999999999999775 6788899994 44555666777
Q ss_pred HHHHHhh---hcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh-----cCccccCCCCCcEEEeCCCCCCCCcccc
Q 001705 366 EAEELGL---DASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ-----RGVSCFGRFMPRMVVIPPGMDFSYVTTQ 437 (1024)
Q Consensus 366 ~~e~~~l---~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~-----~g~~~~g~~~~ki~VIPnGiD~~~f~~~ 437 (1024)
+.+++++ .+++.+.+++.++.++ |.....|+++.... .|++..| +...+..+|.|+|..+|...
T Consensus 185 p~r~eIl~gll~~~~i~f~t~d~arh-------Fls~c~R~l~~~~~s~~~~~~v~~rg-r~~~v~~~pigid~~r~v~~ 256 (732)
T KOG1050|consen 185 PVRKEILRGLLYDDLLGFHTDDYARH-------FLSTCSRLLGLEVASKFPTAGVSGRG-RDVSVKALPIGIDVQRFVKL 256 (732)
T ss_pred ccHHHHHHhhhccCccccccccHHHH-------HHHHHHHHHHhhhhccCCcceEEecc-ceeeeeecccccchHHhhcc
Confidence 6655444 5999999999999887 77888888888877 3444444 33478999999999988654
Q ss_pred CCCCCCccccccccCccccccCCCCcchHHHhhhhCC-CCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCc----EE
Q 001705 438 DTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTN-PHKPTILALSRPDPKKNVTTLLKAFGECQPLRELAN----MT 512 (1024)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~ 512 (1024)
.. .+.+....+.+... .++++|+.++|+|+.||+..-+.||+++ +.++|. ++
T Consensus 257 ~~---------------------~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~--L~~~pe~~~kVv 313 (732)
T KOG1050|consen 257 LE---------------------LPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQF--LEEYPEWIDKVV 313 (732)
T ss_pred cc---------------------chhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHH--HHhChhhhceEE
Confidence 42 33344444444332 4789999999999999999999999998 455653 33
Q ss_pred EE-E-----ecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHH
Q 001705 513 LI-L-----GNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTI 586 (1024)
Q Consensus 513 LI-v-----G~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~l 586 (1024)
++ + +.+.++++++........+|++........+.+.+...++..++.++|..| |++++.++.+|+++++
T Consensus 314 liqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Va----ev~~v~s~rdGmnl~~ 389 (732)
T KOG1050|consen 314 LIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVA----EVCPVTSWRDGMNLVF 389 (732)
T ss_pred EEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhh----hheeecccccccchhh
Confidence 32 2 334445566666677777788777777766767788999999999999999 9999999999999999
Q ss_pred HHHHHc--C--CcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH-HhcCCHHHHHHH
Q 001705 587 IEAAAY--G--LPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKN-IHRFSWPEHCRN 661 (1024)
Q Consensus 587 lEAmA~--G--~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~-~~~fsw~~~a~~ 661 (1024)
+|+.+| + .+.|.+..-|..+..+ ...++++|+|.++++.+|..++++++...+.+....-. +...+...|++.
T Consensus 390 ~e~i~~~~~~~~~lVlsef~G~~~tl~--d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~ 467 (732)
T KOG1050|consen 390 LEYILCQENKKSVLVLSEFIGDDTTLE--DAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKS 467 (732)
T ss_pred hHHHHhhcccCCceEEeeecccccccc--ccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHH
Confidence 999999 2 4555555444445543 45789999999999999999999887766665544443 367888888888
Q ss_pred HHHHHHHhhhcCCCCCccccCCCCCCCCCccccccccccccccccccccchhhhHHHHHHHHHHHHhhhcccCCCCCCCC
Q 001705 662 YLSHVEHSRNRHPNSHLEIMTIPGEPLSDSLRDVEDFSLRFSMEGDFKLNAELDAVTRQKNLIEAITQKASFNGNASVTH 741 (1024)
Q Consensus 662 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~s~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (1024)
+++.+.++...........+ + +. .+.++. .
T Consensus 468 ~~~~l~~~~~~~~~~~~~~~------~---------------l~--------------~~~~i~---------------~ 497 (732)
T KOG1050|consen 468 FLQGLKRIWKVGFLGFRVTP------L---------------LT--------------AEHIVS---------------D 497 (732)
T ss_pred HHHhhhhhhhhccccccccc------c---------------cC--------------hhHhhh---------------h
Confidence 88855544332210000000 0 00 112233 3
Q ss_pred CCcccceeEEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHh-cCCCCCCCCEEEec
Q 001705 742 SPGRRQMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRR-CTVNIEDFDAIVCN 820 (1024)
Q Consensus 742 ~~~~~~rlllIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~-~~i~~~~~d~lI~~ 820 (1024)
|.++.+|++++ |.|||+-.+.... +...|+.|..+ |+..+.|+|||....+..++.. .++ +++++
T Consensus 498 y~~s~~rli~l--dyd~t~~~~~~~~---~~~~l~~L~~d---p~n~v~i~s~~~r~~l~~~~~~~~~l------gl~aE 563 (732)
T KOG1050|consen 498 YKKSKKRLILL--DYDLTLIPPRSIK---AISILKDLCSD---PKNIVYIVSGRGRSVLEKWFFGCKNL------GLAAE 563 (732)
T ss_pred hhhccceEEEe--cccccccCCCCch---HHHHHHHHhcC---CCCeEEEEEccCchhhhhhccccccc------eeecc
Confidence 44677888885 5558844442222 77888888888 7889999999999999777633 233 69999
Q ss_pred CCceEEcCCCccccCcchhhhh-cccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHH
Q 001705 821 SGSELYFPWRDMVADGDYEAHV-EYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQ 899 (1024)
Q Consensus 821 nGa~I~~~~~~~~~d~~~~~~i-~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~ 899 (1024)
||..+..+.+ |.... +-.|. +.++.+++.+.+++++ ..++.....-.|++... +.+.+..++.++.+
T Consensus 564 hG~f~r~~~~-------w~~~~~~~~w~-~~v~~i~~~~~ert~G---S~ie~k~~~l~~hy~~a-d~~~g~~qA~el~~ 631 (732)
T KOG1050|consen 564 HGYFVRIPGK-------WETCVLDLDWK-DLVKDIFQYYTERTPG---SYIERKETALVWHYRNA-DPEFGELQAKELLE 631 (732)
T ss_pred cCceeccCCc-------eeeecccccHH-HHHHHHHHHHHhcCCC---ceecccCceEEEeeecc-CcchhHHHHHHHHH
Confidence 9999987621 65444 45675 7788889888887655 33444333333333333 33345667788888
Q ss_pred HHHhcCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCC
Q 001705 900 RLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGL 965 (1024)
Q Consensus 900 ~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~a 965 (1024)
+|......++++... ..+||-|.|+|||.|...+...+. ++.+++.++||... | ++||...
T Consensus 632 ~l~~~~~~~~v~~g~--~~Vev~~~gvsk~~~~~~~~~~~~-~~~df~~c~g~d~t-D-ed~~~~~ 692 (732)
T KOG1050|consen 632 HLESKNEPVEVVRGK--HIVEVRPQGVSKGLAAERILSEMV-KEPDFVLCIGDDRT-D-EDMFEFI 692 (732)
T ss_pred HhcccCCCeEEEecC--ceEEEcccccchHHHHHHHHHhcC-CCcceEEEecCCCC-h-HHHHHHH
Confidence 887633344444433 389999999999999999999998 44455555799776 9 9999853
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=271.78 Aligned_cols=227 Identities=14% Similarity=0.187 Sum_probs=164.1
Q ss_pred eEEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcC
Q 001705 749 LIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFP 828 (1024)
Q Consensus 749 lllIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~ 828 (1024)
+.+|++|+||||+++++.+++.++++|++++++ |+.|+|||||++..+.+++..+++ .+++||+||+.|++.
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~----~~~~i~~nGa~i~~~ 74 (230)
T PRK01158 3 IKAIAIDIDGTITDKDRRLSLKAVEAIRKAEKL----GIPVILATGNVLCFARAAAKLIGT----SGPVIAENGGVISVG 74 (230)
T ss_pred eeEEEEecCCCcCCCCCccCHHHHHHHHHHHHC----CCEEEEEcCCchHHHHHHHHHhCC----CCcEEEecCeEEEEc
Confidence 347779999999998888999999999999987 999999999999999999999887 347999999999975
Q ss_pred C-CccccCcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCe
Q 001705 829 W-RDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFR 907 (1024)
Q Consensus 829 ~-~~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~ 907 (1024)
. +.. .+...+. .....+..+...+.................++... . .. ..+++.+.++..+..
T Consensus 75 ~~~~~----~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~---~~~~~~~~l~~~~~~ 139 (230)
T PRK01158 75 FDGKR----IFLGDIE------ECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALR-R-TV---PVEEVRELLEELGLD 139 (230)
T ss_pred CCCCE----EEEcchH------HHHHHHHHHHHhccccceeeecCCcccccceeeec-c-cc---cHHHHHHHHHHcCCc
Confidence 1 111 1111111 12222222211111100000000000011122111 1 11 234555556554444
Q ss_pred EEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccc
Q 001705 908 CNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 908 ~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad 987 (1024)
+.++.+ .. ++||+|+++|||.|+++|++++|++++++++| ||+.| | ++||+.+|+||||+ ||.+++|+.|+
T Consensus 140 ~~~~~~-~~-~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~-GD~~N-D-i~m~~~ag~~vam~----Na~~~vk~~a~ 210 (230)
T PRK01158 140 LEIVDS-GF-AIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI-GDSEN-D-LEMFEVAGFGVAVA----NADEELKEAAD 210 (230)
T ss_pred EEEEec-ce-EEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE-CCchh-h-HHHHHhcCceEEec----CccHHHHHhcc
Confidence 555444 33 89999999999999999999999999999998 99999 9 99999999999999 99999999999
Q ss_pred cCCCCCccCCCCCCeeEeccccChhHHHHHHHhccc
Q 001705 988 AFKREDVVPPDSPNIAYIEESYEPQDLSAALKAIKI 1023 (1024)
Q Consensus 988 ~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~~~ 1023 (1024)
+||.++++|||+++|+++.+
T Consensus 211 ----------------~v~~~n~~~Gv~~~l~~~~~ 230 (230)
T PRK01158 211 ----------------YVTEKSYGEGVAEAIEHLLL 230 (230)
T ss_pred ----------------eEecCCCcChHHHHHHHHhC
Confidence 99999999999999999864
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=301.15 Aligned_cols=234 Identities=17% Similarity=0.167 Sum_probs=166.9
Q ss_pred eeEEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCC-------EEEec
Q 001705 748 MLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFD-------AIVCN 820 (1024)
Q Consensus 748 rlllIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d-------~lI~~ 820 (1024)
++.+|++|+||||+++++.+++.++++|++++++ |+.|+|||||++.++.++++.+++. .++ ++||+
T Consensus 307 ~iKLIa~DLDGTLLn~d~~Is~~t~eAI~kl~ek----Gi~~vIATGR~~~~i~~~l~~L~l~--~~~~~I~~~~p~I~~ 380 (580)
T PLN02887 307 KFSYIFCDMDGTLLNSKSQISETNAKALKEALSR----GVKVVIATGKARPAVIDILKMVDLA--GKDGIISESSPGVFL 380 (580)
T ss_pred CccEEEEeCCCCCCCCCCccCHHHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHhCcc--cccceEeecccEEee
Confidence 4557789999999998889999999999999998 9999999999999999999998763 233 46678
Q ss_pred CCceEEcCCCccccCcchhhhhcccCCchhHHHHHhh---------------------------hhhccCCCC-c-c-cc
Q 001705 821 SGSELYFPWRDMVADGDYEAHVEYRWPGENVRSVVPR---------------------------VARAEDGAE-D-D-IV 870 (1024)
Q Consensus 821 nGa~I~~~~~~~~~d~~~~~~i~~~w~~~~v~~~l~~---------------------------~~~~~~~~~-~-~-~~ 870 (1024)
||+.||+.++... +...+ ..+.+..++.. +........ . + ..
T Consensus 381 NGA~I~d~~g~~I----~~~~L----~~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l 452 (580)
T PLN02887 381 QGLLVYGRQGREI----YRSNL----DQEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIMSSV 452 (580)
T ss_pred cCeEEEECCCcEE----EEEeC----CHHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccccCCH
Confidence 9999996422211 00000 00111111100 000000000 0 0 00
Q ss_pred ccc-CCCCceEEEEEecCCCchhhHHHHHHHHHh-cCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEE
Q 001705 871 GFV-DASSSRCQSYSIKPGAETRKVDNIRQRLRM-RGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVV 948 (1024)
Q Consensus 871 ~~~-~~~~~~k~~~~~~~~~~~~~~~el~~~L~~-~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vva 948 (1024)
... ......++.+.. ... ....++.+.+.. ....+.++.+... ++||+|+++|||.||++|++++||+++++||
T Consensus 453 ~~~~~~~~i~Ki~~~~-~~e--~~~~~l~~~l~~~~~~~~~v~~S~~~-~lEI~p~gvSKG~ALk~L~e~lGI~~eeviA 528 (580)
T PLN02887 453 DQLLAAADIQKVIFLD-TAE--GVSSVLRPYWSEATGDRANVVQAQPD-MLEIVPPGTSKGNGVKMLLNHLGVSPDEIMA 528 (580)
T ss_pred HHhhcccCeeEEEEEc-ChH--HHHHHHHHHHHHHhcCcEEEEEecCc-EEEEecCCCCHHHHHHHHHHHcCCCHHHEEE
Confidence 000 012344554432 111 112334444432 2345788888876 9999999999999999999999999999999
Q ss_pred EeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHHhcc
Q 001705 949 FVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAIK 1022 (1024)
Q Consensus 949 fiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~~ 1022 (1024)
| ||+.| | ++||+.+|+||||| ||.+++|++|+ +||.+|++|||+.+|+++-
T Consensus 529 F-GDs~N-D-IeMLe~AG~gVAMg----NA~eeVK~~Ad----------------~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 529 I-GDGEN-D-IEMLQLASLGVALS----NGAEKTKAVAD----------------VIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred E-ecchh-h-HHHHHHCCCEEEeC----CCCHHHHHhCC----------------EEeCCCCcCHHHHHHHHhh
Confidence 8 99999 9 99999999999999 99999999999 9999999999999999873
|
|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-28 Score=287.11 Aligned_cols=281 Identities=17% Similarity=0.220 Sum_probs=210.8
Q ss_pred CcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCC
Q 001705 303 TWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTST 382 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S 382 (1024)
.++||+|++.......+ ++.....+|+++++|+....... .......+...|. ......+.+|.||++|
T Consensus 210 ~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~~~----~~~~~~~~~~~y~------~~~~~~~~~D~iI~~S 278 (500)
T TIGR02918 210 TKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSESA----TNETYILWNNYYE------YQFSNADYIDFFITAT 278 (500)
T ss_pred CCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcCcc----CcchhHHHHHHHH------HHHhchhhCCEEEECC
Confidence 36899999876433323 44555689999999963211100 0000000111111 1122357889999999
Q ss_pred HHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCC
Q 001705 383 RQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLP 462 (1024)
Q Consensus 383 ~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p 462 (1024)
+...+.+...++. ++...+++.+||+|++...+.+..
T Consensus 279 ~~~~~~l~~~~~~-------------------~~~~~~ki~viP~g~~~~~~~~~~------------------------ 315 (500)
T TIGR02918 279 DIQNQILKNQFKK-------------------YYNIEPRIYTIPVGSLDELQYPEQ------------------------ 315 (500)
T ss_pred HHHHHHHHHHhhh-------------------hcCCCCcEEEEcCCCcccccCccc------------------------
Confidence 8777665443322 111224899999998654332211
Q ss_pred cchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHH
Q 001705 463 PMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDK 541 (1024)
Q Consensus 463 ~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~ 541 (1024)
......|+++||+.+.||++.+++|+..+. ...|++.| |+|+++. ...+.+++.+
T Consensus 316 -----------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~--~~~p~~~l~i~G~G~~-----------~~~l~~~i~~ 371 (500)
T TIGR02918 316 -----------ERKPFSIITASRLAKEKHIDWLVKAVVKAK--KSVPELTFDIYGEGGE-----------KQKLQKIINE 371 (500)
T ss_pred -----------ccCCeEEEEEeccccccCHHHHHHHHHHHH--hhCCCeEEEEEECchh-----------HHHHHHHHHH
Confidence 123457999999999999999999999985 45677777 7888763 3567788999
Q ss_pred cCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCC-CchhhhccCCcEEEeCCC
Q 001705 542 YDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNG-GPVDILKALNNGLLVDPH 620 (1024)
Q Consensus 542 ~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~G-g~~eii~~~~~Gllv~p~ 620 (1024)
+++.+.|.|.|+. ++.++|+.| |++|+||..||||++++||||||+|||+++.| |++|+|.++.+|+++++.
T Consensus 372 ~~l~~~V~f~G~~---~~~~~~~~a----dv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~ 444 (500)
T TIGR02918 372 NQAQDYIHLKGHR---NLSEVYKDY----ELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPID 444 (500)
T ss_pred cCCCCeEEEcCCC---CHHHHHHhC----CEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCC
Confidence 9999999999973 799999999 99999999999999999999999999999986 899999999999999743
Q ss_pred ----C----HHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Q 001705 621 ----D----QNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHS 669 (1024)
Q Consensus 621 ----d----~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~ 669 (1024)
| ++++|++|.+++. ++.++++++++++.++.|||+.++++|.++++++
T Consensus 445 ~~~~d~~~~~~~la~~I~~ll~-~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 445 EEEDDEDQIITALAEKIVEYFN-SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVREV 500 (500)
T ss_pred ccccchhHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 3 8899999999994 5678999999999889999999999999998753
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-27 Score=269.90 Aligned_cols=346 Identities=22% Similarity=0.248 Sum_probs=245.9
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++++.. + ..||..+++.+|+++|.+.| |+|++++.......... .. ....
T Consensus 1 kIl~~~~~---------~----~~gG~~~~~~~l~~~l~~~g--~~v~v~~~~~~~~~~~~-----~~--------~~~~ 52 (353)
T cd03811 1 KILFVIPS---------L----GGGGAERVLLNLANGLDKRG--YDVTLVVLRDEGDYLEL-----LP--------SNVK 52 (353)
T ss_pred CeEEEeec---------c----cCCCcchhHHHHHHHHHhcC--ceEEEEEcCCCCccccc-----cc--------cchh
Confidence 58888854 1 27899999999999999999 99999988643221000 00 0000
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC-ChHHHHHHHHccCCCC
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYA-DAGEVAAHLSGALNVP 329 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~-~~~~~a~~l~~~~~ip 329 (1024)
.......... .+. ...+ ...+.+.+.+ .+||+||+|.. ....++.+.... ++|
T Consensus 53 ~~~~~~~~~~----------~~~-~~~~-------~~~~~~~~~~-------~~~dii~~~~~~~~~~~~~~~~~~-~~~ 106 (353)
T cd03811 53 LIPVRVLKLK----------SLR-DLLA-------ILRLRRLLRK-------EKPDVVISHLTTTPNVLALLAARL-GTK 106 (353)
T ss_pred hhceeeeecc----------ccc-chhH-------HHHHHHHHHh-------cCCCEEEEcCccchhHHHHHHhhc-CCc
Confidence 0001110000 000 0011 1112222222 47999999987 555555544444 899
Q ss_pred EEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh
Q 001705 330 MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409 (1024)
Q Consensus 330 iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~ 409 (1024)
++++.|+......... .... ..+...+..+|.+++.|+...+.+...+..
T Consensus 107 ~i~~~~~~~~~~~~~~----------~~~~------~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~-------------- 156 (353)
T cd03811 107 LIVWEHNSLSLELKRK----------LRLL------LLIRKLYRRADKIVAVSEGVKEDLLKLLGI-------------- 156 (353)
T ss_pred eEEEEcCcchhhhccc----------hhHH------HHHHhhccccceEEEeccchhhhHHHhhcC--------------
Confidence 9999998754322100 0000 124567899999999998887776554431
Q ss_pred cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCC
Q 001705 410 RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPK 489 (1024)
Q Consensus 410 ~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~ 489 (1024)
...++.+||||+|...+.+... +. . ......+++.|+++||+.+.
T Consensus 157 --------~~~~~~vi~~~~~~~~~~~~~~----------------------~~----~-~~~~~~~~~~i~~~g~~~~~ 201 (353)
T cd03811 157 --------PPDKIEVIYNPIDIEEIRALAE----------------------EP----L-ELGIPPDGPVILAVGRLSPQ 201 (353)
T ss_pred --------CccccEEecCCcChhhcCcccc----------------------hh----h-hcCCCCCceEEEEEecchhh
Confidence 1138999999999887754431 00 0 11223567899999999999
Q ss_pred CCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhc
Q 001705 490 KNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 568 (1024)
Q Consensus 490 Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~ 568 (1024)
||++.+++|+..+.. ..+++.+ ++|+++. ...+.+.+.++++.++|.+.|+ .+++.++|+.|
T Consensus 202 k~~~~~i~~~~~l~~--~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~~-- 264 (353)
T cd03811 202 KGFDTLIRAFALLRK--EGPDARLVILGDGPL-----------REELEALAKELGLADRVHFLGF--QSNPYPYLKAA-- 264 (353)
T ss_pred cChHHHHHHHHHhhh--cCCCceEEEEcCCcc-----------HHHHHHHHHhcCCCccEEEecc--cCCHHHHHHhC--
Confidence 999999999999964 2456665 6787654 2445578888999999999999 46899999999
Q ss_pred CCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHH---HHHHHHHHhCHHHHHHHHHH
Q 001705 569 TKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAI---ADALLKLLADKNMWSECRKN 645 (1024)
Q Consensus 569 ~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~l---a~aI~~ll~d~~~~~~~~~~ 645 (1024)
|++|+||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|.+++ +++|..++.+++.+++++.+
T Consensus 265 --d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 342 (353)
T cd03811 265 --DLFVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLLDPELRERLAAA 342 (353)
T ss_pred --CEEEeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCChHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 77888888899999999998
Q ss_pred HHHHH-hcCC
Q 001705 646 GLKNI-HRFS 654 (1024)
Q Consensus 646 ~~~~~-~~fs 654 (1024)
+++.+ ++|+
T Consensus 343 ~~~~~~~~~~ 352 (353)
T cd03811 343 ARERVAREYS 352 (353)
T ss_pred HHHHHHHHhc
Confidence 88776 5765
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-28 Score=277.60 Aligned_cols=264 Identities=17% Similarity=0.242 Sum_probs=194.7
Q ss_pred CcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhh---HHHHh-cCCCCc-chhhHHHHHHHHHHHHHhhhcCCE
Q 001705 303 TWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKF---EQLLK-QGRLPK-DINASYKIMRRIEAEELGLDASEM 377 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~---~~l~~-~g~~~~-~i~~~y~~~r~i~~e~~~l~~Ad~ 377 (1024)
.++|+||++...... .+....++|.+++.|+..+..+ ..+.. .+.... .....+..++ .++...++.+|.
T Consensus 82 ~~~D~v~~~~~~~~~---~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~ 156 (351)
T cd03804 82 SGYDLVISSSHAVAK---GVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLR--IWDRRSAARVDY 156 (351)
T ss_pred cCCCEEEEcCcHHhc---cccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHH--HHHHHHhcCCCE
Confidence 469999987642221 2224557999999997422111 11111 111111 0011112222 246778899999
Q ss_pred EEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccc
Q 001705 378 VVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQS 457 (1024)
Q Consensus 378 Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~ 457 (1024)
|++.|+...+.+.+.+.. +..+||||+|.+.|.+..
T Consensus 157 ii~~S~~~~~~~~~~~~~-------------------------~~~vi~~~~d~~~~~~~~------------------- 192 (351)
T cd03804 157 FIANSRFVARRIKKYYGR-------------------------DATVIYPPVDTDRFTPAE------------------- 192 (351)
T ss_pred EEECCHHHHHHHHHHhCC-------------------------CcEEECCCCCHhhcCcCC-------------------
Confidence 999999888876544332 568999999988774322
Q ss_pred cCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHH
Q 001705 458 KRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLK 537 (1024)
Q Consensus 458 ~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~ 537 (1024)
..++.|+++||+.+.||++.+++|+..++ .++ +|+|+++..+ ++.+
T Consensus 193 -----------------~~~~~il~~G~~~~~K~~~~li~a~~~~~-----~~l-~ivG~g~~~~-----------~l~~ 238 (351)
T cd03804 193 -----------------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG-----KRL-VVIGDGPELD-----------RLRA 238 (351)
T ss_pred -----------------CCCCEEEEEEcCccccChHHHHHHHHHCC-----CcE-EEEECChhHH-----------HHHh
Confidence 23567999999999999999999998873 223 4778876422 2222
Q ss_pred HHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEe
Q 001705 538 LIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLV 617 (1024)
Q Consensus 538 ~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv 617 (1024)
+..++|.|.|+++.+++.++|+.| |++|+||. |+||++++||||||+|||+++.||..|++.++.+|+++
T Consensus 239 -----~~~~~V~~~g~~~~~~~~~~~~~a----d~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~ 308 (351)
T cd03804 239 -----KAGPNVTFLGRVSDEELRDLYARA----RAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILF 308 (351)
T ss_pred -----hcCCCEEEecCCCHHHHHHHHHhC----CEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEe
Confidence 445789999999999999999999 99999999 99999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHH
Q 001705 618 DPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNY 662 (1024)
Q Consensus 618 ~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~ 662 (1024)
+|.|+++++++|.+++++++ ..++++++.+++|+|+.+.+++
T Consensus 309 ~~~~~~~la~~i~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 350 (351)
T cd03804 309 EEQTVESLAAAVERFEKNED---FDPQAIRAHAERFSESRFREKI 350 (351)
T ss_pred CCCCHHHHHHHHHHHHhCcc---cCHHHHHHHHHhcCHHHHHHHh
Confidence 99999999999999999984 2344555556779999888765
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-28 Score=283.04 Aligned_cols=440 Identities=20% Similarity=0.230 Sum_probs=293.1
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCC--C--
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPS--D-- 245 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~--~-- 245 (1024)
|||++++.+.. | -..+||..-.+..|.++|++.| ++|.|+.+... .+...+....+.+.... .
T Consensus 1 M~Il~v~~E~~--------p-~vK~GGLaDv~~alpk~L~~~g--~~v~v~lP~y~--~~~~~~~~~~~~~~~~~~~~~~ 67 (487)
T COG0297 1 MKILFVASEIF--------P-FVKTGGLADVVGALPKALAKRG--VDVRVLLPSYP--KVQKEWRDLLKVVGKFGVLKGG 67 (487)
T ss_pred Ccceeeeeeec--------C-ccccCcHHHHHHHhHHHHHhcC--CeEEEEcCCch--hhhhhhccccceeeEeeeeecc
Confidence 89999998743 2 3589999999999999999999 99999988754 22222222111110000 0
Q ss_pred -----C----CCCCCeEEEEecCCCCCCcccc--ccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCC-CCcceEEEEcCC
Q 001705 246 -----G----TGSCGAYIIRIPCGARDKYIAK--ESLWPYIHEFVDGALNHIVNMARAIGEQVNGGK-PTWPYVIHGHYA 313 (1024)
Q Consensus 246 -----~----~~~~gv~i~rip~~~~~~~~~k--~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~-~~~pDvIh~h~~ 313 (1024)
. ....++.+.-+.. + .++.. ...+.+........ .|..+..+.+..+. ...|||||+|+|
T Consensus 68 ~~~~~~~~~~~~~~~v~~~lid~-~--~~f~r~~~~~~~~~d~~~Rf~-----~F~~a~~~~~~~~~~~~~pDIvH~hDW 139 (487)
T COG0297 68 RAQLFIVKEYGKDGGVDLYLIDN-P--ALFKRPDSTLYGYYDNAERFA-----FFSLAAAELAPLGLISWLPDIVHAHDW 139 (487)
T ss_pred cceEEEEEeecccCCCcEEEecC-h--hhcCccccccCCCCcHHHHHH-----HHHHHHHHHhhhcCCCCCCCEEEeecH
Confidence 0 1011133333321 1 22222 13333333222211 22333333332221 147999999999
Q ss_pred ChHHHHHHHHcc----CCCCEEEEeCCCchhhhH---HHHhcCCCCcchhhHHHHH-----HHHHHHHHhhhcCCEEEeC
Q 001705 314 DAGEVAAHLSGA----LNVPMVLTGHSLGRNKFE---QLLKQGRLPKDINASYKIM-----RRIEAEELGLDASEMVVTS 381 (1024)
Q Consensus 314 ~~~~~a~~l~~~----~~ipiV~t~H~l~~~~~~---~l~~~g~~~~~i~~~y~~~-----r~i~~e~~~l~~Ad~Vi~~ 381 (1024)
++++++.+++.. ..+|.|||+|++...... ..-..|. ++..|... -.+...+..+..||.|.++
T Consensus 140 qt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgL----p~~~~~~~~l~~~~~~~~lK~gi~~ad~vttV 215 (487)
T COG0297 140 QTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGL----PFEAYASFGLEFYGQISFLKGGLYYADAVTTV 215 (487)
T ss_pred HHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcC----CHHHhhhceeeecCcchhhhhhheeccEEEEE
Confidence 999999999984 479999999997332211 1111111 11111100 1122356678899999999
Q ss_pred CHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCC
Q 001705 382 TRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNL 461 (1024)
Q Consensus 382 S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1024)
|..++++++ .+.|...++..+..+. -++.-|-||+|.+.+.|... ..+...+.++.... -.
T Consensus 216 SptYa~Ei~--t~~~g~gl~g~l~~~~-----------~~l~GI~NgiD~~~wnp~~d----~~~~~~y~~~~~~~--k~ 276 (487)
T COG0297 216 SPTYAGEIY--TPEYGEGLEGLLSWRS-----------GKLSGILNGIDYDLWNPETD----PYIAANYSAEVLPA--KA 276 (487)
T ss_pred CHHHHHhhc--cccccccchhhhhhcc-----------ccEEEEEeeEEecccCcccc----cchhccCCccchhh--hH
Confidence 999999986 4556555555555443 28899999999999988763 22222222111110 00
Q ss_pred CcchHHHhhhhCC--CCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHH
Q 001705 462 PPMWSEVMRFFTN--PHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLI 539 (1024)
Q Consensus 462 p~~~~~~~~~~~~--~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i 539 (1024)
........++... .+.|++.++||++.+||++.+++++..+.+ ....+ +++|.++ ..+.+.+..+.
T Consensus 277 ~nk~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~--~~~~~-vilG~gd---------~~le~~~~~la 344 (487)
T COG0297 277 ENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLE--QGWQL-VLLGTGD---------PELEEALRALA 344 (487)
T ss_pred HHHHHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHH--hCceE-EEEecCc---------HHHHHHHHHHH
Confidence 1112223344443 367999999999999999999999999953 33222 4778773 34567788888
Q ss_pred HHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhcc--------C
Q 001705 540 DKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKA--------L 611 (1024)
Q Consensus 540 ~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~--------~ 611 (1024)
..+.. ++...-..+..-...+|+.| |++++||++||||++-++||++|+++|+..+||.+|.|.+ .
T Consensus 345 ~~~~~--~~~~~i~~~~~la~~i~aga----D~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~ 418 (487)
T COG0297 345 SRHPG--RVLVVIGYDEPLAHLIYAGA----DVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGV 418 (487)
T ss_pred HhcCc--eEEEEeeecHHHHHHHHhcC----CEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCc
Confidence 87764 55554444455567777778 9999999999999999999999999999999999998875 4
Q ss_pred CcEEEeCCCCHHHHHHHHHHHHh---CHHH-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhcC
Q 001705 612 NNGLLVDPHDQNAIADALLKLLA---DKNM-WSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNRH 673 (1024)
Q Consensus 612 ~~Gllv~p~d~~~la~aI~~ll~---d~~~-~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~~ 673 (1024)
.+|+++.+.++++++.+|.+++. .++. |+.+..+++. ..|||+..+++|.+.|+.+++..
T Consensus 419 gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~--~d~sw~~sa~~y~~lY~~~~~~~ 482 (487)
T COG0297 419 GTGFLFLQTNPDHLANALRRALVLYRAPPLLWRKVQPNAMG--ADFSWDLSAKEYVELYKPLLSKP 482 (487)
T ss_pred eeEEEEecCCHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc--cccCchhHHHHHHHHHHHHhccc
Confidence 78999999999999999998886 4444 9988888887 79999999999999999988643
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-27 Score=273.09 Aligned_cols=333 Identities=16% Similarity=0.131 Sum_probs=221.8
Q ss_pred hHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCCeEEEEecCCCCCCccccccCCcch
Q 001705 196 GQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWPYI 275 (1024)
Q Consensus 196 G~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~lwp~~ 275 (1024)
|.+..+.+++..|+++|+ ++|+|+|.... +...+. ....|++++++|. +.... ....++..+
T Consensus 16 g~~~r~~~~~~~l~~~~~-~~v~vi~~~~~--------~~~~~~-------~~~~~v~v~r~~~-~~~~~-~~~~~~~~~ 77 (371)
T PLN02275 16 GRSPRMQYHALSLARQAS-FQVDVVAYGGS--------EPIPAL-------LNHPSIHIHLMVQ-PRLLQ-RLPRVLYAL 77 (371)
T ss_pred CCCHHHHHHHHHHHhcCC-ceEEEEEecCC--------CCCHHH-------hcCCcEEEEECCC-ccccc-ccccchHHH
Confidence 455677889999999873 58999986421 111111 2235899999986 32111 111122211
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCh---HHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCC
Q 001705 276 HEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADA---GEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLP 352 (1024)
Q Consensus 276 ~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~---~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~ 352 (1024)
.++.. .......+...+. .+ ..+||+||+|.... ...+.++++..++|+|++.|+++.. ....|...
T Consensus 78 ~~~~~-~~~~~~~~~~~~~--~~---~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~----~~~~~~~~ 147 (371)
T PLN02275 78 ALLLK-VAIQFLMLLWFLC--VK---IPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT----LLALSLGR 147 (371)
T ss_pred HHHHH-HHHHHHHHHHHHH--hh---CCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH----HHhcccCC
Confidence 11111 1011111111110 01 14799999997432 4456666767789999999987421 12222211
Q ss_pred cchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCC
Q 001705 353 KDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFS 432 (1024)
Q Consensus 353 ~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~ 432 (1024)
. ...+++++++ |+.+++.||.|+++|+...+.+...+ |+ ++.+||||. .+
T Consensus 148 ~--~~~~~~~~~~--e~~~~~~ad~ii~~S~~~~~~l~~~~-----------------g~--------~i~vi~n~~-~~ 197 (371)
T PLN02275 148 S--HPLVRLYRWY--ERHYGKMADGHLCVTKAMQHELDQNW-----------------GI--------RATVLYDQP-PE 197 (371)
T ss_pred C--CHHHHHHHHH--HHHHHhhCCEEEECCHHHHHHHHHhc-----------------CC--------CeEEECCCC-HH
Confidence 1 1123344444 77789999999999998777643321 11 378999984 45
Q ss_pred CccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhcccc-------
Q 001705 433 YVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPL------- 505 (1024)
Q Consensus 433 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l------- 505 (1024)
.|.|... . ... ..+...+|+++||+.+.||++.+++|+..+...
T Consensus 198 ~f~~~~~----------------------~------~~~-~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~ 248 (371)
T PLN02275 198 FFRPASL----------------------E------IRL-RPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNE 248 (371)
T ss_pred HcCcCCc----------------------h------hcc-cCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhcccc
Confidence 5644331 0 000 112345788999999999999999999876310
Q ss_pred --------CCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEe-CCCCCCCCHHHHHHHhhcCCcEEEe
Q 001705 506 --------RELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFIN 575 (1024)
Q Consensus 506 --------~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~-~g~~~~~el~~ly~~A~~~~dv~v~ 575 (1024)
...|++.+ |+|+|+. .++++++++++++.+ +.| .|+++.++++.+|+.| |++|+
T Consensus 249 ~~~~~~~~~~~~~i~l~ivG~G~~-----------~~~l~~~~~~~~l~~-v~~~~~~~~~~~~~~~l~~a----Dv~v~ 312 (371)
T PLN02275 249 SDSASGKQSLYPRLLFIITGKGPQ-----------KAMYEEKISRLNLRH-VAFRTMWLEAEDYPLLLGSA----DLGVS 312 (371)
T ss_pred ccccccccccCCCeEEEEEeCCCC-----------HHHHHHHHHHcCCCc-eEEEcCCCCHHHHHHHHHhC----CEEEE
Confidence 23467776 8899875 356778889999976 666 5578999999999999 99998
Q ss_pred cC---CCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHH
Q 001705 576 PA---LVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLL 633 (1024)
Q Consensus 576 ps---~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll 633 (1024)
|+ ..|+||++++||||||+|||+++.||..|+|.++.+|++++ |+++++++|.+++
T Consensus 313 ~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 313 LHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred eccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 63 24899999999999999999999999999999999999996 7999999998875
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=271.82 Aligned_cols=233 Identities=12% Similarity=0.078 Sum_probs=159.5
Q ss_pred eEEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcC
Q 001705 749 LIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFP 828 (1024)
Q Consensus 749 lllIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~ 828 (1024)
..+|++||||||+++++.+++.++++|++++++ |+.|+|||||++.++.+++++++++ .+++||+||+.||..
T Consensus 7 ~~lI~~DlDGTLL~~~~~i~~~~~~ai~~l~~~----Gi~~viaTGR~~~~i~~~~~~l~~~---~~~~I~~NGa~I~~~ 79 (271)
T PRK03669 7 PLLIFTDLDGTLLDSHTYDWQPAAPWLTRLREA----QVPVILCSSKTAAEMLPLQQTLGLQ---GLPLIAENGAVIQLD 79 (271)
T ss_pred CeEEEEeCccCCcCCCCcCcHHHHHHHHHHHHc----CCeEEEEcCCCHHHHHHHHHHhCCC---CCcEEEeCCCEEEec
Confidence 346679999999998788899999999999998 9999999999999999999998873 247999999999975
Q ss_pred CCccccCcchhhhhcccCCchhHHHHHhhhhhc-c------CCCC--------ccc--c--cccCCCCceEEEEEecCCC
Q 001705 829 WRDMVADGDYEAHVEYRWPGENVRSVVPRVARA-E------DGAE--------DDI--V--GFVDASSSRCQSYSIKPGA 889 (1024)
Q Consensus 829 ~~~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~-~------~~~~--------~~~--~--~~~~~~~~~k~~~~~~~~~ 889 (1024)
.+.. ....+. ........+.+..++...... . .... ... . .........++.+. .+
T Consensus 80 ~~~~-~~~~~~-~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-- 154 (271)
T PRK03669 80 EQWQ-DHPDFP-RIISGISHGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWR-DS-- 154 (271)
T ss_pred Cccc-CCCCce-EeecCCCHHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEec-CC--
Confidence 2100 000000 001111222333332221110 0 0000 000 0 00001112233222 11
Q ss_pred chhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCC---CCCCEEEEeCCCCCCChHHhhcCCC
Q 001705 890 ETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGI---DLSKMVVFVGEKGDTDYEDLLVGLH 966 (1024)
Q Consensus 890 ~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi---~~~~vvafiGDs~N~D~~~Ml~~ag 966 (1024)
.....++.+.+... .++++.+ +. ++||+|+++|||+||++|++++|+ ++++++|| ||+.| | ++||+.+|
T Consensus 155 -~~~~~~~~~~l~~~--~~~~~~~-~~-~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viaf-GDs~N-D-i~Ml~~ag 226 (271)
T PRK03669 155 -DERMAQFTARLAEL--GLQFVQG-AR-FWHVLDASAGKDQAANWLIATYQQLSGTRPTTLGL-GDGPN-D-APLLDVMD 226 (271)
T ss_pred -HHHHHHHHHHHHHC--CCEEEec-Ce-eEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEE-cCCHH-H-HHHHHhCC
Confidence 22445666666543 4555553 33 899999999999999999999999 99999998 99999 9 99999999
Q ss_pred ceEEecCCCCCChH-H-----HhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHHhc
Q 001705 967 KTLILRGSVMYGSE-K-----LLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAI 1021 (1024)
Q Consensus 967 ~gVaMgna~~NA~~-e-----lk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~ 1021 (1024)
+||||| |+.+ . ++..++ |+|...++||+.++|+++
T Consensus 227 ~gvAM~----~~~~~~~~l~~~~~~~~----------------~~~~~~~~~g~~~~l~~~ 267 (271)
T PRK03669 227 YAVVVK----GLNREGVHLQDDDPARV----------------YRTQREGPEGWREGLDHF 267 (271)
T ss_pred EEEEec----CCCCCCcccccccCCce----------------EeccCCCcHHHHHHHHHH
Confidence 999999 5552 1 444666 999999999999999987
|
|
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.9e-27 Score=272.79 Aligned_cols=381 Identities=16% Similarity=0.157 Sum_probs=243.1
Q ss_pred ccccccc---CCCceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCC
Q 001705 159 IWSEDDK---SSRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGE 235 (1024)
Q Consensus 159 ~~~~~~~---~~~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~ 235 (1024)
-|++..+ .+.+-.|.++++-.+ |--||-.+.-.. =|..|++.|+ ++|+++.+-....+-..-|+.
T Consensus 309 ~~~~~~~~~~~~~~r~~~ivTtAsl----------PWmTGtavnpL~-rAayLa~~~~-~~VtlviPWl~~~dq~~vy~~ 376 (794)
T PLN02501 309 FWTDSSKHELSDGKRHVAIVTTASL----------PWMTGTAVNPLF-RAAYLAKSAK-QNVTLLVPWLCKSDQELVYPN 376 (794)
T ss_pred cccCccccccccCCCeEEEEEcccC----------cccccccccHHH-HHHHhcccCC-ceEEEEEecCCccccccccCC
Confidence 4777663 223457999997765 356777766654 3567888865 999998775432111111221
Q ss_pred ------CccccC---CCC--CCCCCCCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCc
Q 001705 236 ------PNEMLS---CPS--DGTGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTW 304 (1024)
Q Consensus 236 ------~~e~l~---~~~--~~~~~~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~ 304 (1024)
|.+..+ ... ..+-.++..|...|.. .-..+.++.|. -.+.+.+.. +.
T Consensus 377 ~~~F~~p~eQe~~ir~wl~~r~g~~~~~~i~fYpg~---~~~~~~SI~p~------------gdI~~~L~~-------f~ 434 (794)
T PLN02501 377 NLTFSSPEEQESYIRNWLEERIGFKADFKISFYPGK---FSKERRSIIPA------------GDTSQFIPS-------KD 434 (794)
T ss_pred CcccCCHHHHHHHHHHHHHHhcCCCCCceEEeecch---hccCCccccch------------HHHHHHhhc-------cC
Confidence 111100 000 0011233344433321 01112223221 111222222 68
Q ss_pred ceEEEEcCC-ChHHH--HHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhh-cCCEEEe
Q 001705 305 PYVIHGHYA-DAGEV--AAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLD-ASEMVVT 380 (1024)
Q Consensus 305 pDvIh~h~~-~~~~~--a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~-~Ad~Vi~ 380 (1024)
|||||++.+ ..++. +...+++++ |+|.++|.-...+..++. .|.... ..+++.++ .+.+ +||.|++
T Consensus 435 PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~eYl~~y~-~g~L~~---~llk~l~~-----~v~r~hcD~VIa 504 (794)
T PLN02501 435 ADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREK-NGALQA---FFVKHINN-----WVTRAYCHKVLR 504 (794)
T ss_pred CCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcHHHHhHhc-chhHHH---HHHHHHHH-----HHHHhhCCEEEc
Confidence 999999987 56777 888888888 999999977655443331 121111 01111111 1111 2899999
Q ss_pred CCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCC
Q 001705 381 STRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRN 460 (1024)
Q Consensus 381 ~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1024)
.|.... .+ .. ++....+|||++.|.|... .
T Consensus 505 PS~atq-~L----~~-------------------------~vI~nVnGVDte~F~P~~r---~----------------- 534 (794)
T PLN02501 505 LSAATQ-DL----PK-------------------------SVICNVHGVNPKFLKIGEK---V----------------- 534 (794)
T ss_pred CCHHHH-Hh----cc-------------------------cceeecccccccccCCcch---h-----------------
Confidence 995443 21 00 1122226999999987652 0
Q ss_pred CCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHH
Q 001705 461 LPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLI 539 (1024)
Q Consensus 461 ~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i 539 (1024)
....++......+.++|+||+.+.||++.||+|+..+. .+.+++.| |+|+|+. ..++.+++
T Consensus 535 -----~~~r~lgi~~~~kgiLfVGRLa~EKGld~LLeAla~L~--~~~pnvrLvIVGDGP~-----------reeLe~la 596 (794)
T PLN02501 535 -----AEERELGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHK--NELDGFNLDVFGNGED-----------AHEVQRAA 596 (794)
T ss_pred -----HHHHhcCCccccCceEEEEcccccCCHHHHHHHHHHHH--hhCCCeEEEEEcCCcc-----------HHHHHHHH
Confidence 00112222233456899999999999999999999885 34467766 8899886 34566777
Q ss_pred HHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCC
Q 001705 540 DKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDP 619 (1024)
Q Consensus 540 ~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p 619 (1024)
.++++ .|.|+|. .++..++|+.+ ||||+||.+|+||++++||||||+|||+++.||. +++.++.+|+++
T Consensus 597 ~eLgL--~V~FLG~--~dd~~~lyasa----DVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~-- 665 (794)
T PLN02501 597 KRLDL--NLNFLKG--RDHADDSLHGY----KVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY-- 665 (794)
T ss_pred HHcCC--EEEecCC--CCCHHHHHHhC----CEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--
Confidence 87877 4889988 46677899999 9999999999999999999999999999999985 446677788876
Q ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 001705 620 HDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 620 ~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~ 667 (1024)
.|+++++++|.++++++..+..+. ....|||+..++++++.-+
T Consensus 666 ~D~EafAeAI~~LLsd~~~rl~~~-----a~~~~SWeAaadrLle~~~ 708 (794)
T PLN02501 666 KTSEDFVAKVKEALANEPQPLTPE-----QRYNLSWEAATQRFMEYSD 708 (794)
T ss_pred CCHHHHHHHHHHHHhCchhhhHHH-----HHhhCCHHHHHHHHHHhhc
Confidence 599999999999999887443322 1348999999999987654
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-28 Score=264.06 Aligned_cols=223 Identities=15% Similarity=0.224 Sum_probs=164.7
Q ss_pred EEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCCc
Q 001705 752 IAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRD 831 (1024)
Q Consensus 752 Ia~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~~ 831 (1024)
|++|+||||++++..++++++++|++++++ |+.|++||||++..+..++..+++ .+++||+||+.|+...+.
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~----g~~~~i~TGR~~~~~~~~~~~~~~----~~~~I~~nGa~i~~~~~~ 72 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGKISPETIEALKELQEK----GIKLVIATGRSYSSIKRLLKELGI----DDYFICSNGALIDDPKGK 72 (254)
T ss_dssp EEEECCTTTCSTTSSSCHHHHHHHHHHHHT----TCEEEEECSSTHHHHHHHHHHTTH----CSEEEEGGGTEEEETTTE
T ss_pred cEEEECCceecCCCeeCHHHHHHHHhhccc----ceEEEEEccCcccccccccccccc----hhhhcccccceeeecccc
Confidence 579999999998888999999999999998 999999999999999999999887 368999999999544232
Q ss_pred cccCcchhhhhcccCCchhHHHHHhhhhhc----------------------------cCCCCc--ccccccCCCCceEE
Q 001705 832 MVADGDYEAHVEYRWPGENVRSVVPRVARA----------------------------EDGAED--DIVGFVDASSSRCQ 881 (1024)
Q Consensus 832 ~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~----------------------------~~~~~~--~~~~~~~~~~~~k~ 881 (1024)
.... ..+ ..+.+..++...... ...... ............++
T Consensus 73 ~l~~----~~i----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki 144 (254)
T PF08282_consen 73 ILYE----KPI----DSDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKI 144 (254)
T ss_dssp EEEE----ESB-----HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEE
T ss_pred cchh----hhe----eccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceee
Confidence 1100 000 011111111111000 000000 00011123455677
Q ss_pred EEEecCCCchhhHHHHHHHHHhc-CCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHH
Q 001705 882 SYSIKPGAETRKVDNIRQRLRMR-GFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYED 960 (1024)
Q Consensus 882 ~~~~~~~~~~~~~~el~~~L~~~-~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~ 960 (1024)
.+..+ ...++++.+.|... ...+.++.+... ++||+|+++|||.||++|++++|++++++++| ||+.| | ++
T Consensus 145 ~~~~~----~~~~~~l~~~l~~~~~~~~~~~~~~~~-~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~-GD~~N-D-~~ 216 (254)
T PF08282_consen 145 LFFPD----PEDLEQLREELKKKFPNLIDVVRSSPY-FLEITPKGVSKGSAIKYLLEYLGISPEDIIAF-GDSEN-D-IE 216 (254)
T ss_dssp EEESC----HHHHHHHHHHHHHHHTTTEEEEEEETT-EEEEEETTSSHHHHHHHHHHHHTTSGGGEEEE-ESSGG-G-HH
T ss_pred ecccc----chhhhhhhhhhccccCcceeEEEeccc-ceEEeeCCCCHHHHHHHHhhhcccccceeEEe-ecccc-c-Hh
Confidence 75432 23455666666544 233577778786 99999999999999999999999999999998 99999 9 99
Q ss_pred hhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHH
Q 001705 961 LLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAAL 1018 (1024)
Q Consensus 961 Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL 1018 (1024)
||+.+|+||||+ ||.++++..|+ ++|..+.+|||+++|
T Consensus 217 Ml~~~~~~~am~----na~~~~k~~a~----------------~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 217 MLELAGYSVAMG----NATPELKKAAD----------------YITPSNNDDGVAKAI 254 (254)
T ss_dssp HHHHSSEEEEET----TS-HHHHHHSS----------------EEESSGTCTHHHHHH
T ss_pred HHhhcCeEEEEc----CCCHHHHHhCC----------------EEecCCCCChHHHhC
Confidence 999999999999 99999999999 999999999999986
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-28 Score=270.02 Aligned_cols=229 Identities=11% Similarity=0.117 Sum_probs=161.1
Q ss_pred EEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcC-
Q 001705 750 IVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFP- 828 (1024)
Q Consensus 750 llIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~- 828 (1024)
.+|++|+||||+++++.+++.++++|++++++ |+.|+|||||++..+.++++.+++. .++||+||+.|++.
T Consensus 4 kli~~DlDGTLl~~~~~i~~~~~~ai~~~~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~d~~ 75 (272)
T PRK10530 4 RVIALDLDGTLLTPKKTILPESLEALARAREA----GYKVIIVTGRHHVAIHPFYQALALD----TPAICCNGTYLYDYQ 75 (272)
T ss_pred cEEEEeCCCceECCCCccCHHHHHHHHHHHHC----CCEEEEEcCCChHHHHHHHHhcCCC----CCEEEcCCcEEEecC
Confidence 47779999999998888999999999999998 9999999999999999999998873 35999999999964
Q ss_pred CCccccCcchhhhhcccCCchhHHHHHhhh------------------------------hhccCCC-Ccccc--cc---
Q 001705 829 WRDMVADGDYEAHVEYRWPGENVRSVVPRV------------------------------ARAEDGA-EDDIV--GF--- 872 (1024)
Q Consensus 829 ~~~~~~d~~~~~~i~~~w~~~~v~~~l~~~------------------------------~~~~~~~-~~~~~--~~--- 872 (1024)
++..... ..+ ..+.+..++... ....... ..... .+
T Consensus 76 ~~~~l~~----~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (272)
T PRK10530 76 AKKVLEA----DPL----PVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQ 147 (272)
T ss_pred CCEEEEe----cCC----CHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHH
Confidence 2221100 000 001111111000 0000000 00000 00
Q ss_pred --cCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEe
Q 001705 873 --VDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFV 950 (1024)
Q Consensus 873 --~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafi 950 (1024)
......+++.... .. ....+++.+.+... ..+.++.+... ++||+|.++|||.||+++++++|++++++++|
T Consensus 148 ~~~~~~~~~~i~~~~--~~-~~~~~~~~~~~~~~-~~~~~~~s~~~-~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~- 221 (272)
T PRK10530 148 AARQVNAIWKFALTH--ED-LPQLQHFAKHVEHE-LGLECEWSWHD-QVDIARKGNSKGKRLTQWVEAQGWSMKNVVAF- 221 (272)
T ss_pred HHhhcCCcEEEEEec--CC-HHHHHHHHHHHhhh-cCceEEEecCc-eEEEecCCCChHHHHHHHHHHcCCCHHHeEEe-
Confidence 0011223332221 11 11233444444332 22445555554 89999999999999999999999999999998
Q ss_pred CCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHHhcc
Q 001705 951 GEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAIK 1022 (1024)
Q Consensus 951 GDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~~ 1022 (1024)
||+.| | ++||+.+|+||||| ||.+++|+.|+ +++.++++|||+.+|+++-
T Consensus 222 GD~~N-D-i~m~~~ag~~vamg----na~~~lk~~Ad----------------~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 222 GDNFN-D-ISMLEAAGLGVAMG----NADDAVKARAD----------------LVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred CCChh-h-HHHHHhcCceEEec----CchHHHHHhCC----------------EEEecCCCCcHHHHHHHHh
Confidence 99999 9 99999999999999 99999999999 9999999999999999873
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=261.77 Aligned_cols=224 Identities=16% Similarity=0.179 Sum_probs=161.3
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCC
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWR 830 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~ 830 (1024)
+|++|+||||+++++.+++++.++|++++++ |+.|+|||||++..+.++++.+++. .++||+||+.|++.++
T Consensus 1 li~~DlDGTLl~~~~~i~~~~~~~i~~l~~~----G~~~~iaTGR~~~~~~~~~~~~~~~----~~~I~~NGa~i~~~~~ 72 (256)
T TIGR00099 1 LIFIDLDGTLLNDDHTISPSTKEALAKLREK----GIKVVLATGRPYKEVKNILKELGLD----TPFITANGAAVIDDQG 72 (256)
T ss_pred CEEEeCCCCCCCCCCccCHHHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCCC----CCEEEcCCcEEECCCC
Confidence 4679999999998888999999999999998 9999999999999999999998773 3799999999998632
Q ss_pred ccccCcchhhhhcccCCchhHHHHHhhhhhcc---------------------------CCCCcccccc---cCCCCceE
Q 001705 831 DMVADGDYEAHVEYRWPGENVRSVVPRVARAE---------------------------DGAEDDIVGF---VDASSSRC 880 (1024)
Q Consensus 831 ~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~---------------------------~~~~~~~~~~---~~~~~~~k 880 (1024)
... +...+ ..+.+..++..+.... .......... .......+
T Consensus 73 ~~i----~~~~i----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (256)
T TIGR00099 73 EIL----YKKPL----DLDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKI 144 (256)
T ss_pred CEE----eecCC----CHHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceE
Confidence 211 11101 1111111111110000 0000000000 00111222
Q ss_pred EEEEecCCCchhhHHHHHHHHHh--cCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCh
Q 001705 881 QSYSIKPGAETRKVDNIRQRLRM--RGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDY 958 (1024)
Q Consensus 881 ~~~~~~~~~~~~~~~el~~~L~~--~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~ 958 (1024)
+.+. .+. ...+++.+.+.. ....+.++.+.+. ++||+|.++|||.||+++++++|++++++++| ||+.| |
T Consensus 145 ~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~s~~~-~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~-GD~~n-D- 216 (256)
T TIGR00099 145 LLLF-LDP---EDLDLLIEALNKLELEENVSVVSSGPY-SIEITAKGVSKGSALQSLAEALGISLEDVIAF-GDGMN-D- 216 (256)
T ss_pred EEEE-CCH---HHHHHHHHHhhhhhhcCCEEEEEecCc-eEEecCCCCChHHHHHHHHHHcCCCHHHEEEe-CCcHH-h-
Confidence 2222 222 234556555542 2345777788776 99999999999999999999999999999998 99999 9
Q ss_pred HHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHH
Q 001705 959 EDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAAL 1018 (1024)
Q Consensus 959 ~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL 1018 (1024)
++||+.+|.+|||+ ||++++++.|+ +++.++++|||+.+|
T Consensus 217 ~~m~~~~~~~~a~~----na~~~~k~~a~----------------~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 217 IEMLEAAGYGVAMG----NADEELKALAD----------------YVTDSNNEDGVALAL 256 (256)
T ss_pred HHHHHhCCceeEec----CchHHHHHhCC----------------EEecCCCCcchhhhC
Confidence 99999999999999 99999999999 999999999999875
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=260.64 Aligned_cols=229 Identities=14% Similarity=0.090 Sum_probs=161.4
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCC
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWR 830 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~ 830 (1024)
+|++|+||||+++++...+.++++|++++++ |+.|++||||++..+..+++.+++ ++++||+||+.|++.++
T Consensus 1 li~~DlDGTll~~~~~~~~~~~~~i~~l~~~----g~~~~~~TgR~~~~~~~~~~~~~~----~~~~I~~NGa~i~~~~~ 72 (256)
T TIGR01486 1 WIFTDLDGTLLDPHGYDWGPAKEVLERLQEL----GIPVIPCTSKTAAEVEYLRKELGL----EDPFIVENGGAIYGPRG 72 (256)
T ss_pred CEEEcCCCCCcCCCCcCchHHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCC----CCcEEEcCCeEEEeCCC
Confidence 4679999998888663444699999999987 999999999999999999999887 36899999999998532
Q ss_pred ccccCcchhhhhcccCCchhHHHHHhhhhhccC----CCCc-----------ccc---cccCCCCceEEEEEecCCCchh
Q 001705 831 DMVADGDYEAHVEYRWPGENVRSVVPRVARAED----GAED-----------DIV---GFVDASSSRCQSYSIKPGAETR 892 (1024)
Q Consensus 831 ~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~----~~~~-----------~~~---~~~~~~~~~k~~~~~~~~~~~~ 892 (1024)
....+..| .....|..+.++.++..+..... .... ... .........++.+. +. .
T Consensus 73 ~~~~~~~~--~~~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~ 145 (256)
T TIGR01486 73 WFTEPEYP--VIALGIPYEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILW--SE---E 145 (256)
T ss_pred cccCCCeE--EEEcCCCHHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceec--Ch---H
Confidence 11111011 12333444555555443221100 0000 000 00000111222222 11 2
Q ss_pred hHHHHHHHHHhcCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCC--CCCEEEEeCCCCCCChHHhhcCCCceEE
Q 001705 893 KVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGID--LSKMVVFVGEKGDTDYEDLLVGLHKTLI 970 (1024)
Q Consensus 893 ~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~--~~~vvafiGDs~N~D~~~Ml~~ag~gVa 970 (1024)
....+.+.+...+ +.++.+. . ++||+|+++|||.||++|++++|++ .+++++| ||+.| | ++||+.+|+|||
T Consensus 146 ~~~~~~~~~~~~~--~~~~~s~-~-~~ei~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~-GD~~N-D-~~Ml~~ag~~va 218 (256)
T TIGR01486 146 RRERFTEALVELG--LEVTHGN-R-FYHVLGAGSDKGKAANALKQFYNQPGGAIKVVGL-GDSPN-D-LPLLEVVDLAVV 218 (256)
T ss_pred HHHHHHHHHHHcC--CEEEeCC-c-eEEEecCCCCHHHHHHHHHHHHhhcCCCceEEEE-cCCHh-h-HHHHHHCCEEEE
Confidence 3455666665432 4555543 4 9999999999999999999999999 9999998 99999 9 999999999999
Q ss_pred ecCCCCCCh---HHHhcc---cccCCCCCccCCCCCCeeEeccccChhHHHHHHHhc
Q 001705 971 LRGSVMYGS---EKLLHG---EDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAI 1021 (1024)
Q Consensus 971 Mgna~~NA~---~elk~~---ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~ 1021 (1024)
|+ ||. +++|+. ++ +||.++++|||+++|++|
T Consensus 219 m~----Na~~~~~~lk~~~~a~~----------------~vt~~~~~dGva~~l~~~ 255 (256)
T TIGR01486 219 VP----GPNGPNVSLKPGDPGSF----------------LLTPAPGPEGWREALEHL 255 (256)
T ss_pred eC----CCCCCccccCccCCCcE----------------EEcCCCCcHHHHHHHHHh
Confidence 99 887 478886 45 899999999999999986
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-26 Score=265.51 Aligned_cols=324 Identities=15% Similarity=0.203 Sum_probs=209.8
Q ss_pred CcceEEEEcCCChHHHHHHHH-ccCCCCEEEEeCCCchhhhHHHHhcCC--CCcc--------hhhHHHHHHHHHHHHHh
Q 001705 303 TWPYVIHGHYADAGEVAAHLS-GALNVPMVLTGHSLGRNKFEQLLKQGR--LPKD--------INASYKIMRRIEAEELG 371 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~a~~l~-~~~~ipiV~t~H~l~~~~~~~l~~~g~--~~~~--------i~~~y~~~r~i~~e~~~ 371 (1024)
..+||+|+|+|+++..+..++ ...++|+|||.|.+..... +..|. +... .-..+.+..+...|+.+
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~---l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~a 223 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRY---LCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAA 223 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccc---cccCCcccchhhhhcchhhhhhcccchHHHHHHHHH
Confidence 469999999999999999999 5578999999998632211 01121 0000 00112233444458889
Q ss_pred hhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCcccccccc
Q 001705 372 LDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIG 451 (1024)
Q Consensus 372 l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~ 451 (1024)
...||.|+++|+....+...+|+. +..+ |||||+|...|.+..+ . ..++.
T Consensus 224 a~~Ad~fttVS~it~~E~~~Ll~~----------------------~pd~--ViPNGid~~~f~~~~e--~-~~~~~--- 273 (590)
T cd03793 224 AHCAHVFTTVSEITAYEAEHLLKR----------------------KPDV--VLPNGLNVKKFSALHE--F-QNLHA--- 273 (590)
T ss_pred HhhCCEEEECChHHHHHHHHHhCC----------------------CCCE--EeCCCcchhhcccchh--h-hhhhH---
Confidence 999999999999888887777543 2223 9999999999865431 0 00000
Q ss_pred CccccccCCCCcchH-----HHhhhhCCCCCcEEEE-EeCCCC-CCCHHHHHHHHhhccccCCC--Cc--E-EEE-EecC
Q 001705 452 NDRTQSKRNLPPMWS-----EVMRFFTNPHKPTILA-LSRPDP-KKNVTTLLKAFGECQPLREL--AN--M-TLI-LGNR 518 (1024)
Q Consensus 452 ~~~~~~~~~~p~~~~-----~~~~~~~~~~~~~Il~-vgRld~-~Kgi~~ll~A~~~l~~l~~~--~~--l-~LI-vG~~ 518 (1024)
.....+.. ...++...+++++++| +||+.+ .||++.+|+|+.++....+. .+ + .+| +-..
T Consensus 274 -------~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~ 346 (590)
T cd03793 274 -------QSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAK 346 (590)
T ss_pred -------HhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCc
Confidence 00011111 1223344578888888 799999 99999999999998642222 21 2 233 2111
Q ss_pred ---CCcccccc---------cchHHH------------------------------------------------------
Q 001705 519 ---DDIEDMSN---------SSSVVL------------------------------------------------------ 532 (1024)
Q Consensus 519 ---~~~~~l~~---------~~~~~~------------------------------------------------------ 532 (1024)
...+.++. ...++.
T Consensus 347 ~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~ 426 (590)
T cd03793 347 TNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDD 426 (590)
T ss_pred cCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcC
Confidence 11111111 001111
Q ss_pred --HHHHHHHHHcCCCCC------EEe-CCCCCCC------CHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEE
Q 001705 533 --TTVLKLIDKYDLYGQ------VAY-PKHHKQS------DVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVV 597 (1024)
Q Consensus 533 --~~i~~~i~~~~l~~~------V~~-~g~~~~~------el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVV 597 (1024)
..|...+.+.++.++ |.| +-+++.. +..++|+.| |++|+||++||||++++||||||+|||
T Consensus 427 ~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~----dl~v~PS~yE~fG~~~lEAma~G~PvI 502 (590)
T cd03793 427 ANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGC----HLGVFPSYYEPWGYTPAECTVMGIPSI 502 (590)
T ss_pred ccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhc----eEEEeccccCCCCcHHHHHHHcCCCEE
Confidence 111222222223222 334 3344333 478999999 999999999999999999999999999
Q ss_pred EcCCCCc----hhhhccC-CcEEEeC-------CCCHHHHHHHHHHHHhCHHHHHHHHHHHH--HHHhcCCHHHHHHHHH
Q 001705 598 ATKNGGP----VDILKAL-NNGLLVD-------PHDQNAIADALLKLLADKNMWSECRKNGL--KNIHRFSWPEHCRNYL 663 (1024)
Q Consensus 598 at~~Gg~----~eii~~~-~~Gllv~-------p~d~~~la~aI~~ll~d~~~~~~~~~~~~--~~~~~fsw~~~a~~~l 663 (1024)
+|+.+|. .|++.++ ..|++|. +.++++|+++|.+++.. +.++.+..+++ +..+.|+|++.+..|.
T Consensus 503 ~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~ 581 (590)
T cd03793 503 TTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYR 581 (590)
T ss_pred EccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 9999988 5665544 3578776 45678899999998854 45666666655 5557999999999999
Q ss_pred HHHHHhhh
Q 001705 664 SHVEHSRN 671 (1024)
Q Consensus 664 ~~~~~~~~ 671 (1024)
+.+...+.
T Consensus 582 ~A~~~Al~ 589 (590)
T cd03793 582 KARQLALS 589 (590)
T ss_pred HHHHHHhh
Confidence 99987654
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.7e-27 Score=248.89 Aligned_cols=213 Identities=16% Similarity=0.217 Sum_probs=155.3
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCC
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWR 830 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~ 830 (1024)
+|++|+||||+++++.+++.++++|+++++. |+.|+|||||++..+..+++.+++. .++||+||+.|++..+
T Consensus 3 ~v~~DlDGTLl~~~~~i~~~~~~~i~~l~~~----g~~~~~~TGR~~~~~~~~~~~l~~~----~~~i~~NGa~i~~~~~ 74 (215)
T TIGR01487 3 LVAIDIDGTLTEPNRMISERAIEAIRKAEKK----GIPVSLVTGNTVPFARALAVLIGTS----GPVVAENGGVIFYNKE 74 (215)
T ss_pred EEEEecCCCcCCCCcccCHHHHHHHHHHHHC----CCEEEEEcCCcchhHHHHHHHhCCC----CcEEEccCcEEEeCCC
Confidence 6779999999988888999999999999987 9999999999999999999998763 3699999999998621
Q ss_pred ccccCcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEE
Q 001705 831 DMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNL 910 (1024)
Q Consensus 831 ~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v 910 (1024)
.. .+.. ....|........ .+... .... ............ .. ..+.+.+.++..+ +.+
T Consensus 75 ~~----~~~~-~~~~~~~~~~~~~--~~~~~-------~~~~--~~~~~~~~~~~~-~~---~~~~~~~~l~~~~--~~~ 132 (215)
T TIGR01487 75 DI----FLAN-MEEEWFLDEEKKK--RFPRD-------RLSN--EYPRASLVIMRE-GK---DVDEVREIIKERG--LNL 132 (215)
T ss_pred cE----EEec-ccchhhHHHhhhh--hhhhh-------hccc--ccceeEEEEecC-Cc---cHHHHHHHHHhCC--eEE
Confidence 11 1110 0001100000000 00000 0000 000111222221 21 2345566665433 444
Q ss_pred EEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCC
Q 001705 911 VYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFK 990 (1024)
Q Consensus 911 ~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~ 990 (1024)
..+ +. ++||+|.++|||.|++++++++|++++++++| ||+.| | ++||+.+|+||||+ ||.+++|+.|+
T Consensus 133 ~~~-~~-~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~i-GDs~N-D-~~ml~~ag~~vam~----na~~~~k~~A~--- 200 (215)
T TIGR01487 133 VDS-GF-AIHIMKKGVDKGVGVEKLKELLGIKPEEVAAI-GDSEN-D-IDLFRVVGFKVAVA----NADDQLKEIAD--- 200 (215)
T ss_pred Eec-Cc-eEEEecCCCChHHHHHHHHHHhCCCHHHEEEE-CCCHH-H-HHHHHhCCCeEEcC----CccHHHHHhCC---
Confidence 444 44 89999999999999999999999999999998 99999 9 99999999999999 99999999999
Q ss_pred CCCccCCCCCCeeEeccccChhHHHHHH
Q 001705 991 REDVVPPDSPNIAYIEESYEPQDLSAAL 1018 (1024)
Q Consensus 991 ~~~v~~~~~~~~~~vt~~~~~dgI~~aL 1018 (1024)
|+|.+++++||+++|
T Consensus 201 -------------~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 201 -------------YVTSNPYGEGVVEVL 215 (215)
T ss_pred -------------EEcCCCCCchhhhhC
Confidence 999999999999875
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-26 Score=262.28 Aligned_cols=273 Identities=24% Similarity=0.319 Sum_probs=209.5
Q ss_pred CcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCC
Q 001705 303 TWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTST 382 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S 382 (1024)
.++|++++|....... ..+......+.++++|+....... ......+...|+ . ....+..+|.|++.|
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~-----~~~~~~~~~~~~---~---~~~~~~~~d~ii~~s 165 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNN-----DPVHSLINNFYE---Y---VFENLDKVDGVIVAT 165 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCcc-----cccccccchhhH---H---HHhChhhCCEEEEcc
Confidence 3689999987654443 234444467789999964221110 000001111111 1 123467899999999
Q ss_pred HHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCC
Q 001705 383 RQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLP 462 (1024)
Q Consensus 383 ~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p 462 (1024)
+...+.+...++. ..++.+||+|++...+.+...
T Consensus 166 ~~~~~~l~~~~~~-----------------------~~~v~~ip~g~~~~~~~~~~~----------------------- 199 (372)
T cd04949 166 EQQKQDLQKQFGN-----------------------YNPIYTIPVGSIDPLKLPAQF----------------------- 199 (372)
T ss_pred HHHHHHHHHHhCC-----------------------CCceEEEcccccChhhcccch-----------------------
Confidence 9887776554332 015899999999876643210
Q ss_pred cchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHH
Q 001705 463 PMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDK 541 (1024)
Q Consensus 463 ~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~ 541 (1024)
....++.|+++||+.+.||++.+++|+..+. ...|++.| |+|.++. ...+..++..
T Consensus 200 ----------~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~--~~~~~~~l~i~G~g~~-----------~~~~~~~~~~ 256 (372)
T cd04949 200 ----------KQRKPHKIITVARLAPEKQLDQLIKAFAKVV--KQVPDATLDIYGYGDE-----------EEKLKELIEE 256 (372)
T ss_pred ----------hhcCCCeEEEEEccCcccCHHHHHHHHHHHH--HhCCCcEEEEEEeCch-----------HHHHHHHHHH
Confidence 1134678999999999999999999999985 34566666 6787654 2345667788
Q ss_pred cCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCC-CchhhhccCCcEEEeCCC
Q 001705 542 YDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNG-GPVDILKALNNGLLVDPH 620 (1024)
Q Consensus 542 ~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~G-g~~eii~~~~~Gllv~p~ 620 (1024)
+++.++|.|.|+ .+++..+|+.| |++|+||..||||++++||||||+|||+++.| |+.+++.++.+|++++++
T Consensus 257 ~~~~~~v~~~g~--~~~~~~~~~~a----d~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~ 330 (372)
T cd04949 257 LGLEDYVFLKGY--TRDLDEVYQKA----QLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKG 330 (372)
T ss_pred cCCcceEEEcCC--CCCHHHHHhhh----hEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCC
Confidence 899999999995 67899999999 99999999999999999999999999999987 899999999999999999
Q ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHH
Q 001705 621 DQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNY 662 (1024)
Q Consensus 621 d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~ 662 (1024)
|+++++++|.+++++++.++++++++++.+++|||+.++++|
T Consensus 331 d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 331 DIEALAEAIIELLNDPKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred cHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 999999999999999999999999999998899999998764
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.1e-26 Score=256.63 Aligned_cols=255 Identities=16% Similarity=0.141 Sum_probs=183.5
Q ss_pred EcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHh-hhcCCEEEeCCHHHHHH
Q 001705 310 GHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELG-LDASEMVVTSTRQEIEM 388 (1024)
Q Consensus 310 ~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~-l~~Ad~Vi~~S~~~~~~ 388 (1024)
.|.....+..+......++|+|++.|+.. ++.+. ++... .+.+|.|++.|+...+.
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~---------------------~l~~~--~~~~~~~~~ad~ii~~S~~~~~~ 108 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTD---------------------AISHT--ALYFFRNQPVDEIVVPSQWSKNA 108 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeec---------------------hhhHH--HHHHHhhccCCEEEECCHHHHHH
Confidence 45444444444444556899999999731 11122 24445 67899999999987776
Q ss_pred HHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHH
Q 001705 389 QWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEV 468 (1024)
Q Consensus 389 ~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 468 (1024)
+.... +. ...++.+||||+|.+.|.+...
T Consensus 109 l~~~g------------------~~----~~~~i~vIpNGVd~~~f~~~~~----------------------------- 137 (331)
T PHA01630 109 FYTSG------------------LK----IPQPIYVIPHNLNPRMFEYKPK----------------------------- 137 (331)
T ss_pred HHHcC------------------CC----CCCCEEEECCCCCHHHcCCCcc-----------------------------
Confidence 43321 00 0128999999999988754331
Q ss_pred hhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCC
Q 001705 469 MRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQ 547 (1024)
Q Consensus 469 ~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~ 547 (1024)
...+..+|++.|++.+.||++.+++|+..+.+ +.+++.+ ++|++.. +. ++ .++.+
T Consensus 138 ----~~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~--~~~~~~llivG~~~~--~~---------~l------~~~~~- 193 (331)
T PHA01630 138 ----EKPHPCVLAILPHSWDRKGGDIVVKIFHELQN--EGYDFYFLIKSSNML--DP---------RL------FGLNG- 193 (331)
T ss_pred ----ccCCCEEEEEeccccccCCHHHHHHHHHHHHh--hCCCEEEEEEeCccc--ch---------hh------ccccc-
Confidence 01234566677789999999999999999853 3456665 6675432 10 01 12222
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCC--------
Q 001705 548 VAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDP-------- 619 (1024)
Q Consensus 548 V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p-------- 619 (1024)
+.+.++.+++..+|+.| |+||+||..|+||++++||||||+|||+|+.||..|++.++.||+++++
T Consensus 194 --~~~~v~~~~l~~~y~~a----Dv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~ 267 (331)
T PHA01630 194 --VKTPLPDDDIYSLFAGC----DILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWY 267 (331)
T ss_pred --eeccCCHHHHHHHHHhC----CEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccc
Confidence 34567889999999999 9999999999999999999999999999999999999999888777642
Q ss_pred -----------CCHHHHHHHHHHHHhCH--HHHHHH-HHHHHHHHhcCCHHHHHHHHHHHHHH
Q 001705 620 -----------HDQNAIADALLKLLADK--NMWSEC-RKNGLKNIHRFSWPEHCRNYLSHVEH 668 (1024)
Q Consensus 620 -----------~d~~~la~aI~~ll~d~--~~~~~~-~~~~~~~~~~fsw~~~a~~~l~~~~~ 668 (1024)
.|.+++++++.+++.++ +.++++ ..+++...++|||+.++++|+++|++
T Consensus 268 ~~~~~~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 268 TNPIHVGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred cCCcccccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 27788999999999873 444444 44444445899999999999999864
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-24 Score=249.07 Aligned_cols=344 Identities=18% Similarity=0.164 Sum_probs=239.0
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGS 249 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~ 249 (1024)
|||++++.+ .||.++...+|+++|.++| |+|++++.... +. .... ..
T Consensus 2 ~~i~i~~~g---------------~gG~~~~~~~la~~L~~~g--~ev~vv~~~~~-~~-----~~~~----------~~ 48 (357)
T PRK00726 2 KKILLAGGG---------------TGGHVFPALALAEELKKRG--WEVLYLGTARG-ME-----ARLV----------PK 48 (357)
T ss_pred cEEEEEcCc---------------chHhhhHHHHHHHHHHhCC--CEEEEEECCCc-hh-----hhcc----------cc
Confidence 888888743 5799999999999999999 99999988531 10 0011 11
Q ss_pred CCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCC
Q 001705 250 CGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVP 329 (1024)
Q Consensus 250 ~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ip 329 (1024)
.|+++++++.... .....+..+..+. ..+....++.+.+.+ .+||+||+|.+.....+.++++..++|
T Consensus 49 ~g~~~~~~~~~~~----~~~~~~~~l~~~~-~~~~~~~~~~~~ik~-------~~pDvv~~~~~~~~~~~~~~~~~~~~p 116 (357)
T PRK00726 49 AGIEFHFIPSGGL----RRKGSLANLKAPF-KLLKGVLQARKILKR-------FKPDVVVGFGGYVSGPGGLAARLLGIP 116 (357)
T ss_pred CCCcEEEEeccCc----CCCChHHHHHHHH-HHHHHHHHHHHHHHh-------cCCCEEEECCCcchhHHHHHHHHcCCC
Confidence 3888888886322 1111111111111 112222233333333 579999999876666666777778999
Q ss_pred EEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh
Q 001705 330 MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409 (1024)
Q Consensus 330 iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~ 409 (1024)
+|++.|+..+. .. ++..+..+|.+++++++... . .
T Consensus 117 ~v~~~~~~~~~--------------------~~-----~r~~~~~~d~ii~~~~~~~~---~----~------------- 151 (357)
T PRK00726 117 LVIHEQNAVPG--------------------LA-----NKLLARFAKKVATAFPGAFP---E----F------------- 151 (357)
T ss_pred EEEEcCCCCcc--------------------HH-----HHHHHHHhchheECchhhhh---c----c-------------
Confidence 99988754211 01 23356688999998874321 1 0
Q ss_pred cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCC
Q 001705 410 RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPK 489 (1024)
Q Consensus 410 ~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~ 489 (1024)
+..++.++|||+|.+.+.+... ..++...++.++|+++|+..+.
T Consensus 152 --------~~~~i~vi~n~v~~~~~~~~~~----------------------------~~~~~~~~~~~~i~~~gg~~~~ 195 (357)
T PRK00726 152 --------FKPKAVVTGNPVREEILALAAP----------------------------PARLAGREGKPTLLVVGGSQGA 195 (357)
T ss_pred --------CCCCEEEECCCCChHhhcccch----------------------------hhhccCCCCCeEEEEECCcHhH
Confidence 1138999999999875532110 0112223567889999999888
Q ss_pred CCHHHHH-HHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhc
Q 001705 490 KNVTTLL-KAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 568 (1024)
Q Consensus 490 Kgi~~ll-~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~ 568 (1024)
|++..++ +|+.++.. .+...+++|+++. +.+.+..+ +++. |.|.|++ +++.++|..|
T Consensus 196 ~~~~~~l~~a~~~~~~---~~~~~~~~G~g~~------------~~~~~~~~-~~~~--v~~~g~~--~~~~~~~~~~-- 253 (357)
T PRK00726 196 RVLNEAVPEALALLPE---ALQVIHQTGKGDL------------EEVRAAYA-AGIN--AEVVPFI--DDMAAAYAAA-- 253 (357)
T ss_pred HHHHHHHHHHHHHhhh---CcEEEEEcCCCcH------------HHHHHHhh-cCCc--EEEeehH--hhHHHHHHhC--
Confidence 8876665 99988742 2433346687652 33444444 6663 8999996 7899999999
Q ss_pred CCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCC--------chhhhccCCcEEEeCCCC--HHHHHHHHHHHHhCHHH
Q 001705 569 TKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG--------PVDILKALNNGLLVDPHD--QNAIADALLKLLADKNM 638 (1024)
Q Consensus 569 ~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg--------~~eii~~~~~Gllv~p~d--~~~la~aI~~ll~d~~~ 638 (1024)
|++|.++- +.+++|||+||+|+|++..++ ..+.+.+.+.|+++++.| +++++++|.+++.+++.
T Consensus 254 --d~~i~~~g----~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~~ 327 (357)
T PRK00726 254 --DLVICRAG----ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDPER 327 (357)
T ss_pred --CEEEECCC----HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCHHH
Confidence 99998762 689999999999999987643 235677778899999888 99999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 001705 639 WSECRKNGLKNIHRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 639 ~~~~~~~~~~~~~~fsw~~~a~~~l~~~~ 667 (1024)
++++++++++..+.++...+++.+++.++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 328 LEAMAEAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred HHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence 99999999998889999999999888764
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-25 Score=245.56 Aligned_cols=234 Identities=12% Similarity=0.136 Sum_probs=158.8
Q ss_pred eEEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcC
Q 001705 749 LIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFP 828 (1024)
Q Consensus 749 lllIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~ 828 (1024)
+.+|++|+||||+++++.+++.++++|++++++ |+.|+|||||++..+..+++.+++. +++||.||+.||++
T Consensus 4 ~kli~~DlDGTLl~~~~~~~~~~~~ai~~l~~~----Gi~~~iaTgR~~~~~~~~~~~l~l~----~~~i~~nGa~i~~~ 75 (273)
T PRK00192 4 KLLVFTDLDGTLLDHHTYSYEPAKPALKALKEK----GIPVIPCTSKTAAEVEVLRKELGLE----DPFIVENGAAIYIP 75 (273)
T ss_pred ceEEEEcCcccCcCCCCcCcHHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCCC----CCEEEEcCcEEEec
Confidence 447779999999987778889999999999987 9999999999999999999998873 46999999999975
Q ss_pred CCcc--------ccCcchhhhhcccCCchhHHHHHhhhhhccC----CCCc-----------cccc--ccCCCCceEEEE
Q 001705 829 WRDM--------VADGDYEAHVEYRWPGENVRSVVPRVARAED----GAED-----------DIVG--FVDASSSRCQSY 883 (1024)
Q Consensus 829 ~~~~--------~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~----~~~~-----------~~~~--~~~~~~~~k~~~ 883 (1024)
++.. ..+..|. .......+.+..++..+..... .... +..+ ........+..+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (273)
T PRK00192 76 KNYFPFQPDGERLKGDYWV--IELGPPYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPF 153 (273)
T ss_pred ccccccCCccccccCCceE--EEcCCCHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCce
Confidence 2110 0000010 1111122333333322211000 0000 0000 000011111112
Q ss_pred E-ecCCCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCC-CCEEEEeCCCCCCChHHh
Q 001705 884 S-IKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDL-SKMVVFVGEKGDTDYEDL 961 (1024)
Q Consensus 884 ~-~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~-~~vvafiGDs~N~D~~~M 961 (1024)
. ... ....+.+.+.+...+ +.++.+ + .++||+|.+ |||.|+++|++++|+++ +++++| ||+.| | ++|
T Consensus 154 ~~~~~---~~~~~~~~~~l~~~~--~~~~~~-~-~~~ei~~~~-~Kg~al~~l~~~~~i~~~~~v~~~-GDs~N-D-i~m 222 (273)
T PRK00192 154 LWNGS---EAAKERFEEALKRLG--LKVTRG-G-RFLHLLGGG-DKGKAVRWLKELYRRQDGVETIAL-GDSPN-D-LPM 222 (273)
T ss_pred eecCc---hHHHHHHHHHHHHcC--CEEEEC-C-eEEEEeCCC-CHHHHHHHHHHHHhccCCceEEEE-cCChh-h-HHH
Confidence 2 111 224556666665433 444443 4 499999999 99999999999999999 999998 99999 9 999
Q ss_pred hcCCCceEEecCCCCCChHHHh----ccc-ccCCCCCccCCCCCCeeEeccccChhHHHHHHHhc
Q 001705 962 LVGLHKTLILRGSVMYGSEKLL----HGE-DAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAI 1021 (1024)
Q Consensus 962 l~~ag~gVaMgna~~NA~~elk----~~a-d~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~ 1021 (1024)
|+.+|++|||+ ||.+++| ++| + .++++.++.+|||+.+|+++
T Consensus 223 ~~~ag~~vam~----NA~~~~k~~~~~~a~~--------------~v~~~~~~~~~Gv~~~l~~~ 269 (273)
T PRK00192 223 LEAADIAVVVP----GPDGPNPPLLPGIADG--------------EFILASAPGPEGWAEAINKL 269 (273)
T ss_pred HHhCCeeEEeC----CCCCCCcccCccccCC--------------ceEEecCCCcHHHHHHHHHH
Confidence 99999999999 9999988 555 3 22445889999999999984
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-23 Score=235.49 Aligned_cols=221 Identities=14% Similarity=0.214 Sum_probs=162.4
Q ss_pred hhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCcccccccc
Q 001705 372 LDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIG 451 (1024)
Q Consensus 372 l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~ 451 (1024)
+...+.+|++|+...+.+... |+. . . .+||+|+|++.|.+... .
T Consensus 90 m~~~~~vIavS~~t~~~L~~~------------------G~~-----~-~-i~I~~GVD~~~f~p~~~--~--------- 133 (335)
T PHA01633 90 LLQDVKFIPNSKFSAENLQEV------------------GLQ-----V-D-LPVFHGINFKIVENAEK--L--------- 133 (335)
T ss_pred HhcCCEEEeCCHHHHHHHHHh------------------CCC-----C-c-eeeeCCCChhhcCccch--h---------
Confidence 344568899998777765432 111 1 3 34789999998865431 0
Q ss_pred CccccccCCCCcchHHHhhhhC-CCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCC--cEEE-EEecCCCccccccc
Q 001705 452 NDRTQSKRNLPPMWSEVMRFFT-NPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELA--NMTL-ILGNRDDIEDMSNS 527 (1024)
Q Consensus 452 ~~~~~~~~~~p~~~~~~~~~~~-~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~--~l~L-IvG~~~~~~~l~~~ 527 (1024)
.+ ..+.++.. .++.++|+++||+++.||++.+++|+..+.+..+.. ++.+ ++|.
T Consensus 134 ---------~~---~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~---------- 191 (335)
T PHA01633 134 ---------VP---QLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH---------- 191 (335)
T ss_pred ---------hH---HHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH----------
Confidence 00 11112221 256789999999999999999999999985322211 3455 3442
Q ss_pred chHHHHHHHHHHHHcCCCCCEEeC---CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc
Q 001705 528 SSVVLTTVLKLIDKYDLYGQVAYP---KHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP 604 (1024)
Q Consensus 528 ~~~~~~~i~~~i~~~~l~~~V~~~---g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~ 604 (1024)
....++++.++|.|. |+.+.+++.++|+.| |+||+||.+||||++++||||||+|||+++.||.
T Consensus 192 ---------~~~~~l~l~~~V~f~g~~G~~~~~dl~~~y~~a----DifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l 258 (335)
T PHA01633 192 ---------KQFTQLEVPANVHFVAEFGHNSREYIFAFYGAM----DFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPL 258 (335)
T ss_pred ---------HHHHHcCCCCcEEEEecCCCCCHHHHHHHHHhC----CEEEECCccccCCHHHHHHHHcCCCEEEccCCCc
Confidence 123456777899998 566778999999999 9999999999999999999999999999999998
Q ss_pred hhhhcc------------------CCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 001705 605 VDILKA------------------LNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLS 664 (1024)
Q Consensus 605 ~eii~~------------------~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~ 664 (1024)
.|++.+ ...|+++++.|+++++++|.+++...+ ..++++++++.++.|+|+.++++|++
T Consensus 259 ~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~-~~~~~~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 259 DEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD-REERSMKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred eeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC-hhhhhHHHHHHHHhcCHHHHHHHhhC
Confidence 886431 124778999999999999999966532 33447788888899999999999863
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-23 Score=240.31 Aligned_cols=330 Identities=18% Similarity=0.193 Sum_probs=226.3
Q ss_pred CChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCCeEEEEecCCCCCCccccccCCc
Q 001705 194 TGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWP 273 (1024)
Q Consensus 194 ~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~lwp 273 (1024)
+||..+++.+|+++|.++| |+|+++|.... ...+. ....|++++++|.... .+...+.
T Consensus 9 ~gG~~~~~~~la~~l~~~G--~ev~v~~~~~~---------~~~~~-------~~~~~~~~~~~~~~~~----~~~~~~~ 66 (350)
T cd03785 9 TGGHIFPALALAEELRERG--AEVLFLGTKRG---------LEARL-------VPKAGIPLHTIPVGGL----RRKGSLK 66 (350)
T ss_pred chhhhhHHHHHHHHHHhCC--CEEEEEECCCc---------chhhc-------ccccCCceEEEEecCc----CCCChHH
Confidence 6899999999999999999 99999988531 00110 1113788888886321 1111222
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCc
Q 001705 274 YIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPK 353 (1024)
Q Consensus 274 ~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~ 353 (1024)
.+..+.. .+.....+.+.+.+ .+||+||+|....+..+.++++..++|++++.|+..+.
T Consensus 67 ~~~~~~~-~~~~~~~~~~~i~~-------~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~~------------- 125 (350)
T cd03785 67 KLKAPFK-LLKGVLQARKILKK-------FKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVPG------------- 125 (350)
T ss_pred HHHHHHH-HHHHHHHHHHHHHh-------cCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCcc-------------
Confidence 2211111 12222223333333 57999999987666666777777899999877653110
Q ss_pred chhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCC
Q 001705 354 DINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSY 433 (1024)
Q Consensus 354 ~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~ 433 (1024)
.. ++.+.+.+|.|++.|+...+. +.+ .++.+||||+|.+.
T Consensus 126 -------~~-----~~~~~~~~~~vi~~s~~~~~~-------~~~---------------------~~~~~i~n~v~~~~ 165 (350)
T cd03785 126 -------LA-----NRLLARFADRVALSFPETAKY-------FPK---------------------DKAVVTGNPVREEI 165 (350)
T ss_pred -------HH-----HHHHHHhhCEEEEcchhhhhc-------CCC---------------------CcEEEECCCCchHH
Confidence 01 233456799999999866543 111 28999999999876
Q ss_pred ccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHH-HHHHHhhccccCCCCcEE
Q 001705 434 VTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTT-LLKAFGECQPLRELANMT 512 (1024)
Q Consensus 434 f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~l~~~~~l~ 512 (1024)
+.+.. ...++..++++++|+++|+....|+... +++|+..+. .....+.
T Consensus 166 ~~~~~----------------------------~~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~--~~~~~~~ 215 (350)
T cd03785 166 LALDR----------------------------ERARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELL--RKRLQVI 215 (350)
T ss_pred hhhhh----------------------------hHHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhh--ccCeEEE
Confidence 54321 0122233467788888888777777765 458888774 2222333
Q ss_pred EEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc
Q 001705 513 LILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAY 592 (1024)
Q Consensus 513 LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~ 592 (1024)
+++|.+. .+++.+.+.++ .++|.|.|+. +++.++|+.| |++|.++- +++++|||++
T Consensus 216 ~i~G~g~------------~~~l~~~~~~~--~~~v~~~g~~--~~~~~~l~~a----d~~v~~sg----~~t~~Eam~~ 271 (350)
T cd03785 216 HQTGKGD------------LEEVKKAYEEL--GVNYEVFPFI--DDMAAAYAAA----DLVISRAG----ASTVAELAAL 271 (350)
T ss_pred EEcCCcc------------HHHHHHHHhcc--CCCeEEeehh--hhHHHHHHhc----CEEEECCC----HhHHHHHHHh
Confidence 4667652 23445555554 4689999996 8999999999 99998662 6899999999
Q ss_pred CCcEEEcCCCC--------chhhhccCCcEEEeCCC--CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHH
Q 001705 593 GLPVVATKNGG--------PVDILKALNNGLLVDPH--DQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCR 660 (1024)
Q Consensus 593 G~PVVat~~Gg--------~~eii~~~~~Gllv~p~--d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~ 660 (1024)
|+|||++..++ ..+.+.+..+|+++++. |+++++++|..++.+++.+++++.++++.++.+.-+++++
T Consensus 272 G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~ 349 (350)
T cd03785 272 GLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDPERLKAMAEAARSLARPDAAERIAD 349 (350)
T ss_pred CCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHh
Confidence 99999987654 24666667899999987 8999999999999999999999999998887777777664
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.8e-23 Score=237.62 Aligned_cols=327 Identities=19% Similarity=0.198 Sum_probs=217.7
Q ss_pred CChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCCeEEEEecCCCCCCccccccCCc
Q 001705 194 TGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWP 273 (1024)
Q Consensus 194 ~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~lwp 273 (1024)
+||......+|+++|.++| |+|+++|+... ...+. ....|+++++++..+.. ...+..
T Consensus 10 ~~g~~~~~~~La~~L~~~g--~eV~vv~~~~~---------~~~~~-------~~~~g~~~~~i~~~~~~----~~~~~~ 67 (348)
T TIGR01133 10 TGGHIFPALAVAEELIKRG--VEVLWLGTKRG---------LEKRL-------VPKAGIEFYFIPVGGLR----RKGSFR 67 (348)
T ss_pred cHHHHhHHHHHHHHHHhCC--CEEEEEeCCCc---------chhcc-------cccCCCceEEEeccCcC----CCChHH
Confidence 4677766679999999999 99999986321 00010 01248888888864321 111111
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCc
Q 001705 274 YIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPK 353 (1024)
Q Consensus 274 ~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~ 353 (1024)
.+..+.. .+.....+.+.+.+ .+||+||+|.......+.++++..++|++++.|+...
T Consensus 68 ~l~~~~~-~~~~~~~l~~~i~~-------~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~-------------- 125 (348)
T TIGR01133 68 LIKTPLK-LLKAVFQARRILKK-------FKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVP-------------- 125 (348)
T ss_pred HHHHHHH-HHHHHHHHHHHHHh-------cCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCc--------------
Confidence 1111111 11222233333333 5799999998766666666777789999865553211
Q ss_pred chhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCC
Q 001705 354 DINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSY 433 (1024)
Q Consensus 354 ~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~ 433 (1024)
... ++.+.+.+|.+++.++...+.+ +..+||||+|...
T Consensus 126 ---------~~~--~~~~~~~~d~ii~~~~~~~~~~-------------------------------~~~~i~n~v~~~~ 163 (348)
T TIGR01133 126 ---------GLT--NKLLSRFAKKVLISFPGAKDHF-------------------------------EAVLVGNPVRQEI 163 (348)
T ss_pred ---------cHH--HHHHHHHhCeeEECchhHhhcC-------------------------------CceEEcCCcCHHH
Confidence 000 2345678999999998654431 3478999998655
Q ss_pred ccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHH-HHHHHhhccccCCCCcEE
Q 001705 434 VTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTT-LLKAFGECQPLRELANMT 512 (1024)
Q Consensus 434 f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~l~~~~~l~ 512 (1024)
+.+... ..++..+++.++|+++|+....|++.. +++|+..+.. ....+.
T Consensus 164 ~~~~~~----------------------------~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~--~~~~~~ 213 (348)
T TIGR01133 164 RSLPVP----------------------------RERFGLREGKPTILVLGGSQGAKILNELVPKALAKLAE--KGIQIV 213 (348)
T ss_pred hcccch----------------------------hhhcCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhh--cCcEEE
Confidence 432210 012233467789999998888888765 4588887742 233443
Q ss_pred EEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc
Q 001705 513 LILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAY 592 (1024)
Q Consensus 513 LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~ 592 (1024)
+++|+++ .+++.+.+.++++...+.|. . .++.++|..| |++|.++ | +++++|||++
T Consensus 214 ~~~g~~~------------~~~l~~~~~~~~l~~~v~~~---~-~~~~~~l~~a----d~~v~~~---g-~~~l~Ea~~~ 269 (348)
T TIGR01133 214 HQTGKND------------LEKVKNVYQELGIEAIVTFI---D-ENMAAAYAAA----DLVISRA---G-ASTVAELAAA 269 (348)
T ss_pred EECCcch------------HHHHHHHHhhCCceEEecCc---c-cCHHHHHHhC----CEEEECC---C-hhHHHHHHHc
Confidence 3445432 24566677777776555555 2 3899999999 9999864 2 7899999999
Q ss_pred CCcEEEcCCCC-------chhhhccCCcEEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHH
Q 001705 593 GLPVVATKNGG-------PVDILKALNNGLLVDPHD--QNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCR 660 (1024)
Q Consensus 593 G~PVVat~~Gg-------~~eii~~~~~Gllv~p~d--~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~ 660 (1024)
|+|+|+++.++ ..+++.++.+|+++++.| +++++++|.++++|++.+++|++++++.+..+.-+++++
T Consensus 270 g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 270 GVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPANLEAMAEAARKLAKPDAAKRIAE 346 (348)
T ss_pred CCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcCCccHHHHHHh
Confidence 99999998654 235788889999999876 999999999999999999999999988776666665554
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.4e-23 Score=223.76 Aligned_cols=215 Identities=13% Similarity=0.123 Sum_probs=138.1
Q ss_pred eEEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcC
Q 001705 749 LIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFP 828 (1024)
Q Consensus 749 lllIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~ 828 (1024)
+.+||+||||||+++++.+++.++++|++++++ |+.|+|||||++..+.+.++..... ..+++||+||+.|+..
T Consensus 5 ~klia~DlDGTLL~~~~~is~~~~~ai~~l~~~----Gi~~viaTGR~~~~i~~~l~~~~~~--~~~~~I~~NGa~I~~~ 78 (247)
T PTZ00174 5 KTILLFDVDGTLTKPRNPITQEMKDTLAKLKSK----GFKIGVVGGSDYPKIKEQLGEDVLE--DFDYVFSENGLVAYKD 78 (247)
T ss_pred CeEEEEECcCCCcCCCCCCCHHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHhhhhhc--ccCeEEeCCceEEEEC
Confidence 457889999999999899999999999999998 9999999999999998888754321 2467999999999964
Q ss_pred CCccccCcchhhhhcccCCchhHHHHHhhhhh----c-cCCCCcccccccCCCCceEEEEEecCC------------Cch
Q 001705 829 WRDMVADGDYEAHVEYRWPGENVRSVVPRVAR----A-EDGAEDDIVGFVDASSSRCQSYSIKPG------------AET 891 (1024)
Q Consensus 829 ~~~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~----~-~~~~~~~~~~~~~~~~~~k~~~~~~~~------------~~~ 891 (1024)
+... +...+......+.+.+++..... . ............ .....+....... ...
T Consensus 79 -~~~i----~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (247)
T PTZ00174 79 -GELF----HSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYR--NGMINISPIGRNCSQEERDEFEKYDKEH 151 (247)
T ss_pred -CeEE----EEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcC--CceEEeccccccCCHHHHHHHHhcCCcc
Confidence 3222 11111110111223333222111 0 000000000000 0000000000000 001
Q ss_pred hhHHHHHHHHHhcCCeEEEEEecC-CeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCC----CCCCChHHhhcCC-
Q 001705 892 RKVDNIRQRLRMRGFRCNLVYTRA-GSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGE----KGDTDYEDLLVGL- 965 (1024)
Q Consensus 892 ~~~~el~~~L~~~~~~~~v~~s~~-~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGD----s~N~D~~~Ml~~a- 965 (1024)
....++.+.+......+.+.++.+ ..++||+|+++|||.||++|+++ +++++|| || ++| | ++||+.+
T Consensus 152 ~~~~~~~~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~----~~eviaf-GD~~~~~~N-D-ieMl~~~~ 224 (247)
T PTZ00174 152 HIREKFIQDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND----FKEIHFF-GDKTFEGGN-D-YEIYNDPR 224 (247)
T ss_pred hHHHHHHHHHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh----hhhEEEE-cccCCCCCC-c-HhhhhcCC
Confidence 123456666644433455566653 24999999999999999999998 5899998 99 999 9 9999976
Q ss_pred CceEEecCCCCCChHHHhcccc
Q 001705 966 HKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 966 g~gVaMgna~~NA~~elk~~ad 987 (1024)
-.|+.++ ||.+.+|..+.
T Consensus 225 ~~g~~v~----n~~~~~~~~~~ 242 (247)
T PTZ00174 225 TIGHSVK----NPEDTIKILKE 242 (247)
T ss_pred CceEEeC----CHHHHHHHHHH
Confidence 4677888 99999998876
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.3e-23 Score=218.44 Aligned_cols=204 Identities=11% Similarity=0.042 Sum_probs=133.4
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCC
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWR 830 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~ 830 (1024)
+|++||||||+++++.+++.++++|++++++ |+.|++||||++..+..+++.+++. ..++||+||+.|++...
T Consensus 1 ~i~~DlDGTLL~~~~~~~~~~~~~l~~l~~~----gi~~~i~TgR~~~~~~~~~~~l~~~---~~~~I~~NGa~i~~~~~ 73 (221)
T TIGR02463 1 WVFSDLDGTLLDSHSYDWQPAAPWLTRLQEA----GIPVILCTSKTAAEVEYLQKALGLT---GDPYIAENGAAIHLEEL 73 (221)
T ss_pred CEEEeCCCCCcCCCCCCcHHHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCCC---CCcEEEeCCcEEEcCcc
Confidence 4789999998888665665699999999987 9999999999999999999998873 25799999999997521
Q ss_pred ccccCcchhhhhcccCCchhHHHHHhhhhhc----cCCCCcccc-----------c--ccCCCCceEEEEEecCCCchhh
Q 001705 831 DMVADGDYEAHVEYRWPGENVRSVVPRVARA----EDGAEDDIV-----------G--FVDASSSRCQSYSIKPGAETRK 893 (1024)
Q Consensus 831 ~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~----~~~~~~~~~-----------~--~~~~~~~~k~~~~~~~~~~~~~ 893 (1024)
.... ..|.. .......+.++.++..+... ......... . ........++.+..... ...
T Consensus 74 ~~~~-~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 149 (221)
T TIGR02463 74 WREE-PGYPR-IILGISYGIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDS--DSR 149 (221)
T ss_pred cccC-CCceE-EecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCc--hhH
Confidence 1000 00000 01111122333333221110 000000000 0 00001112233332111 224
Q ss_pred HHHHHHHHHhcCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEec
Q 001705 894 VDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILR 972 (1024)
Q Consensus 894 ~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMg 972 (1024)
.+++.+.+...+ +.++.+ +. ++||+|.+++||.|++++++++|++++++++| ||+.| | ++||+.+|+|||+.
T Consensus 150 ~~~~~~~l~~~~--~~~~~~-~~-~~ei~~~~~~Kg~al~~l~~~lgi~~~~vi~~-GD~~N-D-i~ml~~ag~~va~~ 221 (221)
T TIGR02463 150 MPRFTALLADLG--LAIVQG-NR-FSHVLGASSSKGKAANWLKATYNQPDVKTLGL-GDGPN-D-LPLLEVADYAVVIK 221 (221)
T ss_pred HHHHHHHHHHcC--CeEEec-CC-eeEEecCCCCHHHHHHHHHHHhCCCCCcEEEE-CCCHH-H-HHHHHhCCceEEeC
Confidence 556666665543 445544 44 89999999999999999999999999999998 99999 9 99999999999974
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.6e-22 Score=218.21 Aligned_cols=199 Identities=10% Similarity=0.005 Sum_probs=136.2
Q ss_pred EEEEEecCCCCCCC-----chhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCce
Q 001705 750 IVIAADCYDSDGNT-----TETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSE 824 (1024)
Q Consensus 750 llIa~DlDGTl~~~-----~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~ 824 (1024)
.+|++|+||||++. ++.+++.++++|++|.++ +|+.|+|+|||++..+.++++.+++ .+||+||++
T Consensus 15 ~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~---~g~~v~i~SGR~~~~~~~~~~~~~~------~~i~~nGa~ 85 (266)
T PRK10187 15 YAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATA---NDGALALISGRSMVELDALAKPYRF------PLAGVHGAE 85 (266)
T ss_pred EEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhC---CCCcEEEEeCCCHHHHHHhcCcccc------eEEEeCCCe
Confidence 34559999998873 568899999999999984 4999999999999999999987654 489999999
Q ss_pred EEcCCCccccCcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCC-chhhHHHHHHHHHh
Q 001705 825 LYFPWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGA-ETRKVDNIRQRLRM 903 (1024)
Q Consensus 825 I~~~~~~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~el~~~L~~ 903 (1024)
++..++.. +...+...|. ..+...+..+....++ ..++. ....+.+++.... ....+.++.+.+..
T Consensus 86 i~~~~~~~-----~~~~l~~~~~-~~i~~~l~~~~~~~pg---~~ve~----k~~~~~~h~r~~~~~~~~~~~l~~~i~~ 152 (266)
T PRK10187 86 RRDINGKT-----HIVHLPDAIA-RDISVQLHTALAQLPG---AELEA----KGMAFALHYRQAPQHEDALLALAQRITQ 152 (266)
T ss_pred eecCCCCe-----eeccCChhHH-HHHHHHHHHHhccCCC---cEEEe----CCcEEEEECCCCCccHHHHHHHHHHHHh
Confidence 98752211 1112222221 1222223232211111 22322 2234445553221 12334445444443
Q ss_pred cCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCC----CceEEecCCCCCCh
Q 001705 904 RGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGL----HKTLILRGSVMYGS 979 (1024)
Q Consensus 904 ~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~a----g~gVaMgna~~NA~ 979 (1024)
... ...+.+++ .++||+|+++|||.||++|++++|++.+++++| ||+.| | ++||+.+ |.||+|| ||.
T Consensus 153 ~~~-~~~~~~g~-~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~~-GD~~n-D-~~mf~~~~~~~g~~vavg----~a~ 223 (266)
T PRK10187 153 IWP-QLALQPGK-CVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVFV-GDDLT-D-EAGFAVVNRLGGISVKVG----TGA 223 (266)
T ss_pred hCC-ceEEeCCC-EEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEEE-cCCcc-H-HHHHHHHHhcCCeEEEEC----CCC
Confidence 322 23344555 599999999999999999999999999999997 99999 9 9999998 9999999 665
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-21 Score=229.77 Aligned_cols=246 Identities=13% Similarity=0.189 Sum_probs=164.1
Q ss_pred CCCCCcccceeEEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEE
Q 001705 739 VTHSPGRRQMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIV 818 (1024)
Q Consensus 739 ~~~~~~~~~rlllIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI 818 (1024)
++..|..-++-.+|++|+||||+++++.+++.++++|++++++ |+.|++||||++..+..+++.+++ .+++|
T Consensus 406 ~~~~~~~~~~~KLIfsDLDGTLLd~d~~i~~~t~eAL~~L~ek----GI~~VIATGRs~~~i~~l~~~Lgl----~~~~I 477 (694)
T PRK14502 406 PSRLPSSGQFKKIVYTDLDGTLLNPLTYSYSTALDALRLLKDK----ELPLVFCSAKTMGEQDLYRNELGI----KDPFI 477 (694)
T ss_pred cccCCCcCceeeEEEEECcCCCcCCCCccCHHHHHHHHHHHHc----CCeEEEEeCCCHHHHHHHHHHcCC----CCeEE
Confidence 4455544444556779999999988777778899999999987 999999999999999999999887 35799
Q ss_pred ecCCceEEcCCCcccc----C---cchhhhhcccCCchhHHHHHhhhhhccC---------------CCCcc--------
Q 001705 819 CNSGSELYFPWRDMVA----D---GDYEAHVEYRWPGENVRSVVPRVARAED---------------GAEDD-------- 868 (1024)
Q Consensus 819 ~~nGa~I~~~~~~~~~----d---~~~~~~i~~~w~~~~v~~~l~~~~~~~~---------------~~~~~-------- 868 (1024)
|+||+.|+.+++.... + ..+ .........+.++.++..+..... .....
T Consensus 478 ~eNGA~I~~~~~~~~~~~~~~~~~~~~-iI~~~~l~~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~ 556 (694)
T PRK14502 478 TENGGAIFIPKDYFRLPFAYDRVAGNY-LVIELGMAYKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRL 556 (694)
T ss_pred EcCCCEEEECCCcccccccccccCCCe-EEEEcCCCHHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHh
Confidence 9999999986321100 0 000 011122333444444433322100 00000
Q ss_pred ---cc----cccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCC
Q 001705 869 ---IV----GFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGI 941 (1024)
Q Consensus 869 ---~~----~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi 941 (1024)
.. .........++.+.. + ...++++.+.++..+ +++.. ++ +++||+ .++|||+||++|++++|+
T Consensus 557 TgL~~~~a~~a~~Re~seKIl~~g-d---~e~Leel~~~L~~~~--l~v~~-g~-rfleI~-~gvdKG~AL~~L~e~~gI 627 (694)
T PRK14502 557 TDLNLKQAELAKQREYSETVHIEG-D---KRSTNIVLNHIQQSG--LEYSF-GG-RFYEVT-GGNDKGKAIKILNELFRL 627 (694)
T ss_pred hCCCHHHHHHHhhccCceeEEEcC-C---HHHHHHHHHHHHHcC--cEEEE-CC-EEEEeC-CCCCHHHHHHHHHHHhCC
Confidence 00 000011223444432 2 235678888887653 44444 44 599999 599999999999999999
Q ss_pred CCCCEEEE-eCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHHh
Q 001705 942 DLSKMVVF-VGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKA 1020 (1024)
Q Consensus 942 ~~~~vvaf-iGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~ 1020 (1024)
+.+++++| +||+.| | ++||+.+|+||||++-. +..+.+ ..++.. .+.+..+.|=..|+++
T Consensus 628 ~~~eViafalGDs~N-D-isMLe~Ag~gVAM~~~~-~~~~~l---------------~~~~~~-~~~~~GP~GW~eai~~ 688 (694)
T PRK14502 628 NFGNIHTFGLGDSEN-D-YSMLETVDSPILVQRPG-NKWHKM---------------RLRNPS-YVKGVGPEGFSRAVTD 688 (694)
T ss_pred CccceEEEEcCCcHh-h-HHHHHhCCceEEEcCCC-CCCCcc---------------CCCCce-ecCCCCcHHHHHHHHH
Confidence 99999985 499999 9 99999999999999444 222233 123444 5578888898888876
Q ss_pred c
Q 001705 1021 I 1021 (1024)
Q Consensus 1021 ~ 1021 (1024)
+
T Consensus 689 ~ 689 (694)
T PRK14502 689 I 689 (694)
T ss_pred H
Confidence 5
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.8e-21 Score=224.34 Aligned_cols=283 Identities=18% Similarity=0.230 Sum_probs=190.0
Q ss_pred CcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCC
Q 001705 303 TWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTST 382 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S 382 (1024)
.+||+||++...........++..++|++++.|.+....+ ..|..+..+ .+.+++.+|.|++.|
T Consensus 123 ~~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~s~--------------~~~~~~~~~--~r~~~~~~d~ii~~S 186 (425)
T PRK05749 123 WRPKLVIIMETELWPNLIAELKRRGIPLVLANARLSERSF--------------KRYQKFKRF--YRLLFKNIDLVLAQS 186 (425)
T ss_pred hCCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChhhH--------------HHHHHHHHH--HHHHHHhCCEEEECC
Confidence 5799999885543322333345679999988775422211 112222222 455788999999999
Q ss_pred HHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCC
Q 001705 383 RQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLP 462 (1024)
Q Consensus 383 ~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p 462 (1024)
+...+.+..+ |.+.. +.++||+ +++.+.+... .+
T Consensus 187 ~~~~~~l~~~-----------------------g~~~~-i~vi~n~-~~d~~~~~~~---------------------~~ 220 (425)
T PRK05749 187 EEDAERFLAL-----------------------GAKNE-VTVTGNL-KFDIEVPPEL---------------------AA 220 (425)
T ss_pred HHHHHHHHHc-----------------------CCCCC-cEecccc-cccCCCChhh---------------------HH
Confidence 9887764331 22223 7788874 3333211110 00
Q ss_pred cchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHH
Q 001705 463 PMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDK 541 (1024)
Q Consensus 463 ~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~ 541 (1024)
.......++. +++++|+++|+. .|+.+.+++|+..+. ...|++.| |+|.++.. ..++.+++++
T Consensus 221 ~~~~~r~~~~--~~~~vil~~~~~--~~~~~~ll~A~~~l~--~~~~~~~liivG~g~~r----------~~~l~~~~~~ 284 (425)
T PRK05749 221 RAATLRRQLA--PNRPVWIAASTH--EGEEELVLDAHRALL--KQFPNLLLILVPRHPER----------FKEVEELLKK 284 (425)
T ss_pred HHHHHHHHhc--CCCcEEEEeCCC--chHHHHHHHHHHHHH--HhCCCcEEEEcCCChhh----------HHHHHHHHHh
Confidence 0111122222 567888888874 688999999999874 34577766 66776531 2457778888
Q ss_pred cCCCCCEEeCCCCC------------CCCHHHHHHHhhcCCcEEEe-cCCCCCCCHHHHHHHHcCCcEEEcCC-CCchhh
Q 001705 542 YDLYGQVAYPKHHK------------QSDVPDIYRLAAKTKGVFIN-PALVEPFGLTIIEAAAYGLPVVATKN-GGPVDI 607 (1024)
Q Consensus 542 ~~l~~~V~~~g~~~------------~~el~~ly~~A~~~~dv~v~-ps~~Egfgl~llEAmA~G~PVVat~~-Gg~~ei 607 (1024)
+++.. +.|.+... ..++..+|+.| |++++ +|+.|++|.+++||||||+|||++.. ++..++
T Consensus 285 ~gl~~-~~~~~~~~~~~~~~v~l~~~~~el~~~y~~a----Di~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~ 359 (425)
T PRK05749 285 AGLSY-VRRSQGEPPSADTDVLLGDTMGELGLLYAIA----DIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEI 359 (425)
T ss_pred CCCcE-EEccCCCCCCCCCcEEEEecHHHHHHHHHhC----CEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHH
Confidence 88752 44443211 35899999999 99655 67889999999999999999999874 666666
Q ss_pred hccC-CcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Q 001705 608 LKAL-NNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSR 670 (1024)
Q Consensus 608 i~~~-~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~ 670 (1024)
+... .+|+++.|.|+++++++|.++++|++.++++++++++.++.. ....+++++.+.+.+
T Consensus 360 ~~~~~~~g~~~~~~d~~~La~~l~~ll~~~~~~~~m~~~a~~~~~~~--~~~~~~~~~~l~~~l 421 (425)
T PRK05749 360 FERLLQAGAAIQVEDAEDLAKAVTYLLTDPDARQAYGEAGVAFLKQN--QGALQRTLQLLEPYL 421 (425)
T ss_pred HHHHHHCCCeEEECCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHhc
Confidence 5542 468888899999999999999999999999999999998533 255667777776544
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.1e-22 Score=208.05 Aligned_cols=197 Identities=16% Similarity=0.247 Sum_probs=135.7
Q ss_pred EEEEecCCCCCCCc-hhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCC
Q 001705 751 VIAADCYDSDGNTT-ETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPW 829 (1024)
Q Consensus 751 lIa~DlDGTl~~~~-~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~ 829 (1024)
+|++|+||||++++ ..+++.++++|++|+++ |+.|+|+|||++..+..+++.++ +++||+||+.|++.+
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~l~~~----g~~~~i~TGR~~~~~~~~~~~~~------~~~i~~nGa~i~~~~ 70 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALERLREA----GVKVVLVTGRSLAEIKELLKQLP------LPLIAENGALIFYPG 70 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHhCC------CCEEECCCcEEEECC
Confidence 36799999988876 68999999999999998 89999999999999999998832 469999999999752
Q ss_pred Ccccc--CcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCC-CchhhHHHHHHHHHhcC-
Q 001705 830 RDMVA--DGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPG-AETRKVDNIRQRLRMRG- 905 (1024)
Q Consensus 830 ~~~~~--d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~el~~~L~~~~- 905 (1024)
+.... ...|...+. +. +.+...+..+... ......+....++.+++... .......++...+....
T Consensus 71 ~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~-------~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (204)
T TIGR01484 71 EILYIEPSDVFEEILG--IK-EEIGAELKSLSEH-------YVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGR 140 (204)
T ss_pred EEEEEcccccHHHHHH--hh-hhcCceeeeeccc-------cccceeecccceeeEEEeccchhhHHHHHHHHHHHhhcc
Confidence 11110 011111111 00 1111111111111 11111223445556655332 11122334445554432
Q ss_pred --CeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEe
Q 001705 906 --FRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLIL 971 (1024)
Q Consensus 906 --~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaM 971 (1024)
..+.++++++. ++||+|++++|+.|+++++++++++++++++| ||+.| | ++||+.+|.+|||
T Consensus 141 ~~~~~~~~~s~~~-~~ev~p~~~~K~~~~~~~~~~~~~~~~~~~~~-GD~~n-D-~~~~~~~~~~vam 204 (204)
T TIGR01484 141 NDLELEAIYVGKT-DLEVLPAGVDKGSALQALLKELNGKRDEILAF-GDSGN-D-EEMFEVAGLAVAV 204 (204)
T ss_pred ccCcEEEEEecCC-EEEEecCCCChHHHHHHHHHHhCCCHHHEEEE-cCCHH-H-HHHHHHcCCceEC
Confidence 34677767776 99999999999999999999999999999997 99999 9 9999999999998
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-19 Score=209.31 Aligned_cols=265 Identities=19% Similarity=0.150 Sum_probs=179.2
Q ss_pred CcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCC
Q 001705 303 TWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTST 382 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S 382 (1024)
....+++++.+.+..++.. ..+.++|+..++...... +. . .. ....|+.+++.||.|++.|
T Consensus 101 ~~~~i~~~~~P~~~~~~~~---~~~~~~Vyd~~D~~~~~~------~~-~----~~-----~~~~e~~~~~~ad~vi~~S 161 (373)
T cd04950 101 FGRPILWYYTPYTLPVAAL---LQASLVVYDCVDDLSAFP------GG-P----PE-----LLEAERRLLKRADLVFTTS 161 (373)
T ss_pred CCCcEEEEeCccHHHHHhh---cCCCeEEEEcccchhccC------CC-C----HH-----HHHHHHHHHHhCCEEEECC
Confidence 4567888876655544444 457899999998643211 11 0 00 1144788899999999999
Q ss_pred HHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCC
Q 001705 383 RQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLP 462 (1024)
Q Consensus 383 ~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p 462 (1024)
+...+.+.... .++.+||||+|.+.|.+... ...+
T Consensus 162 ~~l~~~~~~~~--------------------------~~i~~i~ngvd~~~f~~~~~-------------------~~~~ 196 (373)
T cd04950 162 PSLYEAKRRLN--------------------------PNVVLVPNGVDYEHFAAARD-------------------PPPP 196 (373)
T ss_pred HHHHHHHhhCC--------------------------CCEEEcccccCHHHhhcccc-------------------cCCC
Confidence 87665432211 28999999999998865431 0000
Q ss_pred cchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHH
Q 001705 463 PMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDK 541 (1024)
Q Consensus 463 ~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~ 541 (1024)
.+.....++++|+|+|+++++++++.+.++.... |+..+ ++|.++...+. ..
T Consensus 197 ------~~~~~~~~~~~i~y~G~l~~~~d~~ll~~la~~~------p~~~~vliG~~~~~~~~---------------~~ 249 (373)
T cd04950 197 ------PADLAALPRPVIGYYGAIAEWLDLELLEALAKAR------PDWSFVLIGPVDVSIDP---------------SA 249 (373)
T ss_pred ------hhHHhcCCCCEEEEEeccccccCHHHHHHHHHHC------CCCEEEEECCCcCccCh---------------hH
Confidence 0011235678999999999988887666555432 44555 67776221111 11
Q ss_pred cCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCC-----CCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEE
Q 001705 542 YDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALV-----EPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLL 616 (1024)
Q Consensus 542 ~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~-----Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gll 616 (1024)
+.-.++|.|+|+++.++++.+|+.| |++++|+.. +.+|++++||||||+|||+|+.++. +.....+++
T Consensus 250 ~~~~~nV~~~G~~~~~~l~~~l~~~----Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~---~~~~~~~~~ 322 (373)
T cd04950 250 LLRLPNVHYLGPKPYKELPAYLAGF----DVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEV---RRYEDEVVL 322 (373)
T ss_pred hccCCCEEEeCCCCHHHHHHHHHhC----CEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHH---HhhcCcEEE
Confidence 1124689999999999999999999 999999753 4679999999999999999986544 433343444
Q ss_pred eCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 001705 617 VDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEH 668 (1024)
Q Consensus 617 v~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~ 668 (1024)
+ +.|+++++++|.+++.++...+.. ...+.++.|||+..++++++.+.+
T Consensus 323 ~-~~d~~~~~~ai~~~l~~~~~~~~~--~~~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 323 I-ADDPEEFVAAIEKALLEDGPARER--RRLRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred e-CCCHHHHHHHHHHHHhcCCchHHH--HHHHHHHHCCHHHHHHHHHHHHHh
Confidence 4 669999999999987643222211 122245799999999999976654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-19 Score=208.42 Aligned_cols=263 Identities=13% Similarity=0.109 Sum_probs=178.0
Q ss_pred CcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCC
Q 001705 303 TWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTST 382 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S 382 (1024)
.+||+||+|++.........+...++|++.+.++++.. ..++.+.+|.+++.|
T Consensus 103 ~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~---------------------------~~~~~~~ad~i~~~s 155 (380)
T PRK13609 103 EKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLH---------------------------KIWVHREVDRYFVAT 155 (380)
T ss_pred hCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCC---------------------------cccccCCCCEEEECC
Confidence 58999999876544333333344679988766654221 012467899999999
Q ss_pred HHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCC
Q 001705 383 RQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLP 462 (1024)
Q Consensus 383 ~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p 462 (1024)
+...+.+... |.+..++.++++.++.. |.+..
T Consensus 156 ~~~~~~l~~~-----------------------gi~~~ki~v~G~p~~~~-f~~~~------------------------ 187 (380)
T PRK13609 156 DHVKKVLVDI-----------------------GVPPEQVVETGIPIRSS-FELKI------------------------ 187 (380)
T ss_pred HHHHHHHHHc-----------------------CCChhHEEEECcccChH-HcCcC------------------------
Confidence 8776654321 11223777776555422 21111
Q ss_pred cchHHHhhhhCCCCCcE-EEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHH
Q 001705 463 PMWSEVMRFFTNPHKPT-ILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLID 540 (1024)
Q Consensus 463 ~~~~~~~~~~~~~~~~~-Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~ 540 (1024)
.......++...+++++ +++.|++...|++..+++++.+. +++.+ ++|++. .....++.+++.
T Consensus 188 ~~~~~~~~~~l~~~~~~il~~~G~~~~~k~~~~li~~l~~~------~~~~~viv~G~~---------~~~~~~l~~~~~ 252 (380)
T PRK13609 188 NPDIIYNKYQLCPNKKILLIMAGAHGVLGNVKELCQSLMSV------PDLQVVVVCGKN---------EALKQSLEDLQE 252 (380)
T ss_pred CHHHHHHHcCCCCCCcEEEEEcCCCCCCcCHHHHHHHHhhC------CCcEEEEEeCCC---------HHHHHHHHHHHh
Confidence 00112334444556665 45568888889999999988543 34444 343321 123455666666
Q ss_pred HcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcC-CCCch----hhhccCCcEE
Q 001705 541 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATK-NGGPV----DILKALNNGL 615 (1024)
Q Consensus 541 ~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~-~Gg~~----eii~~~~~Gl 615 (1024)
.++ .+|.|+|++ +++.++|+.| |++|. ++.|++++||||||+|||+++ .+|.. +.+. .+|+
T Consensus 253 ~~~--~~v~~~g~~--~~~~~l~~~a----D~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~--~~G~ 318 (380)
T PRK13609 253 TNP--DALKVFGYV--ENIDELFRVT----SCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFE--RKGA 318 (380)
T ss_pred cCC--CcEEEEech--hhHHHHHHhc----cEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHH--hCCc
Confidence 554 589999996 5799999999 99884 566999999999999999986 55531 2333 2455
Q ss_pred EeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Q 001705 616 LVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHS 669 (1024)
Q Consensus 616 lv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~ 669 (1024)
.+.+.|+++++++|.++++|++.+++|++++++....++++.+++.+++.+..+
T Consensus 319 ~~~~~~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 319 AVVIRDDEEVFAKTEALLQDDMKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred EEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 555679999999999999999999999999988777899999999998887654
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.1e-19 Score=207.20 Aligned_cols=264 Identities=14% Similarity=0.071 Sum_probs=182.6
Q ss_pred CcceEEEEcCCC-h---HHHHHHHH--ccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCC
Q 001705 303 TWPYVIHGHYAD-A---GEVAAHLS--GALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASE 376 (1024)
Q Consensus 303 ~~pDvIh~h~~~-~---~~~a~~l~--~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad 376 (1024)
.+||+||++++. . ..+...+. ...++|++.+.++++... ..+..+.+|
T Consensus 99 ~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~--------------------------~~w~~~~~d 152 (382)
T PLN02605 99 YKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH--------------------------PTWFHKGVT 152 (382)
T ss_pred cCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC--------------------------cccccCCCC
Confidence 589999997643 2 22222222 134799998888752110 112467999
Q ss_pred EEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCcccc
Q 001705 377 MVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQ 456 (1024)
Q Consensus 377 ~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~ 456 (1024)
.+++.|+...+++... |.+..++.+++++++...+.+..
T Consensus 153 ~~~~~s~~~~~~l~~~-----------------------g~~~~ki~v~g~~v~~~f~~~~~------------------ 191 (382)
T PLN02605 153 RCFCPSEEVAKRALKR-----------------------GLEPSQIRVYGLPIRPSFARAVR------------------ 191 (382)
T ss_pred EEEECCHHHHHHHHHc-----------------------CCCHHHEEEECcccCHhhccCCC------------------
Confidence 9999998776654332 12223899999998865332211
Q ss_pred ccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhcccc--CCCCc--EEEEEecCCCcccccccchHHH
Q 001705 457 SKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPL--RELAN--MTLILGNRDDIEDMSNSSSVVL 532 (1024)
Q Consensus 457 ~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l--~~~~~--l~LIvG~~~~~~~l~~~~~~~~ 532 (1024)
.....+.++..++++++|+++||....|++..+++++..+... ...++ +.+++|+++. ..
T Consensus 192 ------~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~----------~~ 255 (382)
T PLN02605 192 ------PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK----------LQ 255 (382)
T ss_pred ------CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH----------HH
Confidence 1112344555667899999999999999999999999764210 01233 3346665421 12
Q ss_pred HHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCC------CCchh
Q 001705 533 TTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKN------GGPVD 606 (1024)
Q Consensus 533 ~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~------Gg~~e 606 (1024)
.++.+. ....+|.|+|++ ++++++|++| |++|.++ .|+++.||||||+|||+++. |+...
T Consensus 256 ~~L~~~----~~~~~v~~~G~~--~~~~~l~~aa----Dv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~ 321 (382)
T PLN02605 256 SKLESR----DWKIPVKVRGFV--TNMEEWMGAC----DCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNVPY 321 (382)
T ss_pred HHHHhh----cccCCeEEEecc--ccHHHHHHhC----CEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhHHH
Confidence 233322 223468999996 5899999999 9999865 48899999999999999983 55544
Q ss_pred hhccCCcEEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 001705 607 ILKALNNGLLVDPHDQNAIADALLKLLAD-KNMWSECRKNGLKNIHRFSWPEHCRNYLSHV 666 (1024)
Q Consensus 607 ii~~~~~Gllv~p~d~~~la~aI~~ll~d-~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~ 666 (1024)
++ +.+.|+++ .|+++++++|.+++.+ ++.+++|++++++.....++..+++.+.+..
T Consensus 322 i~-~~g~g~~~--~~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~~ 379 (382)
T PLN02605 322 VV-DNGFGAFS--ESPKEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVHDLHELV 379 (382)
T ss_pred HH-hCCceeec--CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHh
Confidence 44 45567665 6999999999999998 9999999999999888889888887776654
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-20 Score=192.81 Aligned_cols=161 Identities=31% Similarity=0.535 Sum_probs=141.7
Q ss_pred CCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeC
Q 001705 473 TNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYP 551 (1024)
Q Consensus 473 ~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~ 551 (1024)
...++++|+++||+++.||++.+++|+..+... ..+++.+ |+|+++ +...+...+..+++..++.|+
T Consensus 11 ~~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~-~~~~~~l~i~G~~~-----------~~~~~~~~~~~~~~~~~i~~~ 78 (172)
T PF00534_consen 11 IPDKKKIILFIGRLDPEKGIDLLIEAFKKLKEK-KNPNYKLVIVGDGE-----------YKKELKNLIEKLNLKENIIFL 78 (172)
T ss_dssp T-TTSEEEEEESESSGGGTHHHHHHHHHHHHHH-HHTTEEEEEESHCC-----------HHHHHHHHHHHTTCGTTEEEE
T ss_pred CCCCCeEEEEEecCccccCHHHHHHHHHHHHhh-cCCCeEEEEEcccc-----------ccccccccccccccccccccc
Confidence 357789999999999999999999999998531 2466666 677443 356677888999999999999
Q ss_pred CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHH
Q 001705 552 KHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLK 631 (1024)
Q Consensus 552 g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ 631 (1024)
+..+.+++..+|+.| |++|+||..|+||++++|||+||+|||+++.|+..|++.++.+|+++++.|+++++++|.+
T Consensus 79 ~~~~~~~l~~~~~~~----di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~ 154 (172)
T PF00534_consen 79 GYVPDDELDELYKSS----DIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIEK 154 (172)
T ss_dssp ESHSHHHHHHHHHHT----SEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHHH
T ss_pred ccccccccccccccc----eeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHHH
Confidence 998888999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCHHHHHHHHHHHHHH
Q 001705 632 LLADKNMWSECRKNGLKN 649 (1024)
Q Consensus 632 ll~d~~~~~~~~~~~~~~ 649 (1024)
++.+++.++.++++++++
T Consensus 155 ~l~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 155 LLNDPELRQKLGKNARER 172 (172)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHCCHHHHHHHHHHhcCC
Confidence 999999999999999874
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.2e-19 Score=206.60 Aligned_cols=267 Identities=14% Similarity=0.131 Sum_probs=178.2
Q ss_pred CcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCC
Q 001705 303 TWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTST 382 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S 382 (1024)
.+||+||++.+.........++.+++|++...++.... . .++.+.+|.+++.|
T Consensus 103 ~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~----------------------~-----~w~~~~~d~~~v~s 155 (391)
T PRK13608 103 EKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLH----------------------K-----NWITPYSTRYYVAT 155 (391)
T ss_pred hCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCcc----------------------c-----ccccCCCCEEEECC
Confidence 58999999866443222222344589987655543110 0 12356899999999
Q ss_pred HHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCC
Q 001705 383 RQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLP 462 (1024)
Q Consensus 383 ~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p 462 (1024)
+...+.+... +.. ..++.+++++++.. |.+..
T Consensus 156 ~~~~~~l~~~--gi~---------------------~~ki~v~GiPv~~~-f~~~~------------------------ 187 (391)
T PRK13608 156 KETKQDFIDV--GID---------------------PSTVKVTGIPIDNK-FETPI------------------------ 187 (391)
T ss_pred HHHHHHHHHc--CCC---------------------HHHEEEECeecChH-hcccc------------------------
Confidence 8776664321 111 12788887777633 22111
Q ss_pred cchHHHhhhhCCCCCcE-EEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHH
Q 001705 463 PMWSEVMRFFTNPHKPT-ILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDK 541 (1024)
Q Consensus 463 ~~~~~~~~~~~~~~~~~-Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~ 541 (1024)
.......++..++++++ +++.|++...||+..+++++.+. .+...+.+++|... ....++.+ .
T Consensus 188 ~~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~~~~---~~~~~~vvv~G~~~----------~l~~~l~~---~ 251 (391)
T PRK13608 188 DQKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDILAK---SANAQVVMICGKSK----------ELKRSLTA---K 251 (391)
T ss_pred cHHHHHHHcCCCCCCCEEEEECCCcccchhHHHHHHHHHhc---CCCceEEEEcCCCH----------HHHHHHHH---H
Confidence 01112233444556665 55789999899999999986332 12223333445331 12233333 3
Q ss_pred cCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcC-CCCc----hhhhccCCcEEE
Q 001705 542 YDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATK-NGGP----VDILKALNNGLL 616 (1024)
Q Consensus 542 ~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~-~Gg~----~eii~~~~~Gll 616 (1024)
++..++|.++|+. ++++++|+.| |++|. .+.|+++.||||+|+|+|+++ .+|. ..++.+.+.|++
T Consensus 252 ~~~~~~v~~~G~~--~~~~~~~~~a----Dl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~ 321 (391)
T PRK13608 252 FKSNENVLILGYT--KHMNEWMASS----QLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKI 321 (391)
T ss_pred hccCCCeEEEecc--chHHHHHHhh----hEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEE
Confidence 3445679999995 6899999999 99986 457999999999999999996 3331 223345556666
Q ss_pred eCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhc
Q 001705 617 VDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNR 672 (1024)
Q Consensus 617 v~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~ 672 (1024)
+ .|+++++++|.++++|++.+++|++++++..+.|+++.+++.+++.+....+.
T Consensus 322 ~--~~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~ 375 (391)
T PRK13608 322 A--DTPEEAIKIVASLTNGNEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQP 375 (391)
T ss_pred e--CCHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhh
Confidence 5 49999999999999999999999999999888899999999999998765443
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.7e-20 Score=198.17 Aligned_cols=200 Identities=11% Similarity=0.076 Sum_probs=129.3
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCC
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWR 830 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~ 830 (1024)
+|++|+||||++. ..+++.++++|++++++ |+.|++||||+...+..+++++++ .+++||+||+.|+++..
T Consensus 1 li~~DlDGTLl~~-~~~~~~~~~ai~~l~~~----G~~~vi~TgR~~~~~~~~~~~lg~----~~~~I~~NGa~I~~~~~ 71 (225)
T TIGR02461 1 VIFTDLDGTLLPP-GYEPGPAREALEELKDL----GFPIVFVSSKTRAEQEYYREELGV----EPPFIVENGGAIFIPRG 71 (225)
T ss_pred CEEEeCCCCCcCC-CCCchHHHHHHHHHHHC----CCEEEEEeCCCHHHHHHHHHHcCC----CCcEEEcCCcEEEecCc
Confidence 4679999998885 45666899999999998 999999999999999999999987 34799999999998521
Q ss_pred ccc-----c--CcchhhhhcccCCchhHHHHHhhhhhccC--CCCccccc--------------ccCCCCceEEEEEecC
Q 001705 831 DMV-----A--DGDYEAHVEYRWPGENVRSVVPRVARAED--GAEDDIVG--------------FVDASSSRCQSYSIKP 887 (1024)
Q Consensus 831 ~~~-----~--d~~~~~~i~~~w~~~~v~~~l~~~~~~~~--~~~~~~~~--------------~~~~~~~~k~~~~~~~ 887 (1024)
... . +..+ ......+..+.++.++........ ........ ........++.+. .+
T Consensus 72 ~~~~~~~~~~~~~~~-~i~~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~-~~ 149 (225)
T TIGR02461 72 YFPFPVGAGREVGNY-EVIELGKPVAKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFL-WS 149 (225)
T ss_pred cccccccccccCCCe-EEEEcCCCHHHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccC-CC
Confidence 000 0 0000 011222333444444433322000 00000000 0000111232222 11
Q ss_pred CCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCC--CCCCEEEEeCCCCCCChHHhhcCC
Q 001705 888 GAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGI--DLSKMVVFVGEKGDTDYEDLLVGL 965 (1024)
Q Consensus 888 ~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi--~~~~vvafiGDs~N~D~~~Ml~~a 965 (1024)
.....++.+.+.. ..++++.+.. ++++ +.++|||.|++.|++.+++ +.+++++| ||+.| | ++||+.+
T Consensus 150 ---~e~~~~~~~~~~~--~~~~~~~s~~--~~~i-~~~~sK~~al~~l~~~~~~~~~~~~~i~~-GD~~n-D-~~ml~~a 218 (225)
T TIGR02461 150 ---REGWEAILVTARA--RGLKYTHGGR--FYTV-HGGSDKGKAIKRLLDLYKLRPGAIESVGL-GDSEN-D-FPMFEVV 218 (225)
T ss_pred ---HHHHHHHHHHHHH--cCCcEEECCE--EEEE-CCCCCHHHHHHHHHHHhccccCcccEEEE-cCCHH-H-HHHHHhC
Confidence 1234556666643 2345555543 6776 5599999999999999987 66689998 99999 9 9999999
Q ss_pred CceEEec
Q 001705 966 HKTLILR 972 (1024)
Q Consensus 966 g~gVaMg 972 (1024)
|+||++|
T Consensus 219 g~~v~v~ 225 (225)
T TIGR02461 219 DLAFLVG 225 (225)
T ss_pred CCcEecC
Confidence 9999986
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-19 Score=195.95 Aligned_cols=205 Identities=14% Similarity=0.170 Sum_probs=126.9
Q ss_pred cceeEEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceE
Q 001705 746 RQMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSEL 825 (1024)
Q Consensus 746 ~~rlllIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I 825 (1024)
|+.-+++++|+||||+++++.++++++++|++++ + ++.|++||||++..+.+.+..... .+++++||+||+.+
T Consensus 4 ~~~~~i~~~D~DGTLl~~~~~i~~~~~~ai~~l~-~----~i~fviaTGR~~~~~~~~~~~~~~--~~~~~~I~~NGa~i 76 (245)
T PLN02423 4 RKPGVIALFDVDGTLTAPRKEATPEMLEFMKELR-K----VVTVGVVGGSDLSKISEQLGKTVI--NDYDYVFSENGLVA 76 (245)
T ss_pred CccceEEEEeccCCCcCCCCcCCHHHHHHHHHHH-h----CCEEEEECCcCHHHHHHHhccccc--ccCCEEEECCceEE
Confidence 4445566799999999998899999999999998 4 499999999999998887776311 12357999999999
Q ss_pred EcCCCccccCcchhhhhcccCCchhHHHHHhhhhhc-----cCCCCcccccccCCCCceEEEEEecCC------------
Q 001705 826 YFPWRDMVADGDYEAHVEYRWPGENVRSVVPRVARA-----EDGAEDDIVGFVDASSSRCQSYSIKPG------------ 888 (1024)
Q Consensus 826 ~~~~~~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~k~~~~~~~~------------ 888 (1024)
+.. +... +...+......+.++.++...... .........+........+ +...+.
T Consensus 77 ~~~-g~~i----~~~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~--~~~~~~~~~~~~~~~~i~ 149 (245)
T PLN02423 77 HKD-GKLI----GTQSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVS--PIGRNCSQEERDEFEKYD 149 (245)
T ss_pred EeC-CEEE----EEecccccCCHHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccC--cccccCCHhHHhhHHhhC
Confidence 954 3222 111111111122333332221110 0000000000000000000 000000
Q ss_pred CchhhHHHHHHHHHhcCCeEEEEEecCC-eEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCC----CCCCChHHhhc
Q 001705 889 AETRKVDNIRQRLRMRGFRCNLVYTRAG-SRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGE----KGDTDYEDLLV 963 (1024)
Q Consensus 889 ~~~~~~~el~~~L~~~~~~~~v~~s~~~-~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGD----s~N~D~~~Ml~ 963 (1024)
.......++.+.+......+.++.+.++ .+|||+|+|+|||.||+.|+ +++++||| || ++| | ++||+
T Consensus 150 ~i~~~~~~~~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~-----~~~e~~aF-GD~~~~~~N-D-~eMl~ 221 (245)
T PLN02423 150 KVHNIRPKMVSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE-----DFDEIHFF-GDKTYEGGN-D-HEIFE 221 (245)
T ss_pred ccchHHHHHHHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc-----CcCeEEEE-eccCCCCCC-c-HHHHh
Confidence 0011234555555544344566666553 59999999999999999999 89999999 99 799 9 99999
Q ss_pred C-CCceEEec
Q 001705 964 G-LHKTLILR 972 (1024)
Q Consensus 964 ~-ag~gVaMg 972 (1024)
. .-.++.|.
T Consensus 222 ~~~~~~~~~~ 231 (245)
T PLN02423 222 SERTIGHTVT 231 (245)
T ss_pred CCCcceEEeC
Confidence 6 55788887
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.5e-17 Score=175.18 Aligned_cols=389 Identities=16% Similarity=0.239 Sum_probs=267.6
Q ss_pred CCCChHHHHHHHHHHHHHcC-CCceEEEEEecCCCCCCCCcccCCCccccCCC--CC--CCCCCCeEEEEecCCCCCCcc
Q 001705 192 SDTGGQVKYVVELARALANT-EGVYRVDLLTRQIASPEVDSSYGEPNEMLSCP--SD--GTGSCGAYIIRIPCGARDKYI 266 (1024)
Q Consensus 192 ~~~GG~~~~v~~La~aLa~~-g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~--~~--~~~~~gv~i~rip~~~~~~~~ 266 (1024)
...||-++..+--.+.+.+. +. +...++|.++.- .|.+++... .. +-.++++..+.+.. +++
T Consensus 54 NAGGGGErVLW~Avr~~q~k~~n-~~~viYsGD~n~--------t~~~IL~k~k~~F~idlDs~nI~Fi~Lk~----R~l 120 (465)
T KOG1387|consen 54 NAGGGGERVLWKAVRITQRKFPN-NVIVIYSGDFNV--------TPENILNKVKNKFDIDLDSDNIFFIYLKL----RYL 120 (465)
T ss_pred cCCCCcceehhHHHHHHHHhCCC-ceEEEEeCCCCC--------CHHHHHHHHHHhcCceecccceEEEEEEe----eee
Confidence 45788999999999998775 32 566666666421 111111000 00 02345777777765 566
Q ss_pred ccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCC--chhhhHH
Q 001705 267 AKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSL--GRNKFEQ 344 (1024)
Q Consensus 267 ~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l--~~~~~~~ 344 (1024)
-...-|+++.-..+.+-..+..+.. +.+ +-|||..-..-.+...+ .++...++|++...|-- ..+.+..
T Consensus 121 Vea~~~~hfTllgQaigsmIl~~Ea-i~r-------~~Pdi~IDtMGY~fs~p-~~r~l~~~~V~aYvHYP~iS~DML~~ 191 (465)
T KOG1387|consen 121 VEASTWKHFTLLGQAIGSMILAFEA-IIR-------FPPDIFIDTMGYPFSYP-IFRRLRRIPVVAYVHYPTISTDMLKK 191 (465)
T ss_pred eecccccceehHHHHHHHHHHHHHH-HHh-------CCchheEecCCCcchhH-HHHHHccCceEEEEecccccHHHHHH
Confidence 6677899987766666666655432 222 46887664321122222 23335589999999942 3333333
Q ss_pred HHh---cCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCc
Q 001705 345 LLK---QGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPR 421 (1024)
Q Consensus 345 l~~---~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~k 421 (1024)
+.. .|.....--..|+++.++ ...+-..||.|.+.|.....++.++.+.+ .
T Consensus 192 l~qrq~s~~l~~~KlaY~rlFa~l--Y~~~G~~ad~vm~NssWT~nHI~qiW~~~------------------------~ 245 (465)
T KOG1387|consen 192 LFQRQKSGILVWGKLAYWRLFALL--YQSAGSKADIVMTNSSWTNNHIKQIWQSN------------------------T 245 (465)
T ss_pred HHhhhhcchhhhHHHHHHHHHHHH--HHhccccceEEEecchhhHHHHHHHhhcc------------------------c
Confidence 322 222222222345666655 34556699999998866666665555432 5
Q ss_pred EEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhh
Q 001705 422 MVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGE 501 (1024)
Q Consensus 422 i~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~ 501 (1024)
+.+++|..+.+....... . ...+.+.+|++|.+.|.||.. +|+.+..
T Consensus 246 ~~iVyPPC~~e~lks~~~---------------------t-----------e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al 292 (465)
T KOG1387|consen 246 CSIVYPPCSTEDLKSKFG---------------------T-----------EGERENQLLSLAQFRPEKNHK-ILQLFAL 292 (465)
T ss_pred eeEEcCCCCHHHHHHHhc---------------------c-----------cCCcceEEEEEeecCcccccH-HHHHHHH
Confidence 566766667654322210 0 025678999999999999999 4444433
Q ss_pred ccccCCC----CcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEec
Q 001705 502 CQPLREL----ANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINP 576 (1024)
Q Consensus 502 l~~l~~~----~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~p 576 (1024)
.....+. ++..| ++|+... ++..+.+..++.++.++++.++|.|...+|.+++..+|..| -+-|++
T Consensus 293 ~~~~~pl~a~~~~iKL~ivGScRn-----eeD~ervk~Lkd~a~~L~i~~~v~F~~N~Py~~lv~lL~~a----~iGvh~ 363 (465)
T KOG1387|consen 293 YLKNEPLEASVSPIKLIIVGSCRN-----EEDEERVKSLKDLAEELKIPKHVQFEKNVPYEKLVELLGKA----TIGVHT 363 (465)
T ss_pred HHhcCchhhccCCceEEEEeccCC-----hhhHHHHHHHHHHHHhcCCccceEEEecCCHHHHHHHhccc----eeehhh
Confidence 3222333 34555 6676554 34567889999999999999999999999999999999999 788999
Q ss_pred CCCCCCCHHHHHHHHcCCcEEEcCCCCc-hhhhccC---CcEEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHh
Q 001705 577 ALVEPFGLTIIEAAAYGLPVVATKNGGP-VDILKAL---NNGLLVDPHDQNAIADALLKLLA-DKNMWSECRKNGLKNIH 651 (1024)
Q Consensus 577 s~~Egfgl~llEAmA~G~PVVat~~Gg~-~eii~~~---~~Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~~~ 651 (1024)
-..|-||+.+.||||+|+-+|+.+.||| -|||... .+|++.. +.++.|+++++++. +++++..+++++|+.+.
T Consensus 364 MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~--t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~ 441 (465)
T KOG1387|consen 364 MWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP--TDEEYAEAILKIVKLNYDERNMMRRNARKSLA 441 (465)
T ss_pred hhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC--ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998887 4676542 4799985 78899999999998 67779999999999999
Q ss_pred cCCHHHHHHHHHHHHHHhhhc
Q 001705 652 RFSWPEHCRNYLSHVEHSRNR 672 (1024)
Q Consensus 652 ~fsw~~~a~~~l~~~~~~~~~ 672 (1024)
+|+-....+.|...+..++.+
T Consensus 442 RFsE~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 442 RFGELKFDKDWENPICKLLEE 462 (465)
T ss_pred HhhHHHHHHhHhHHHHHhhcc
Confidence 999999999999999888764
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.4e-18 Score=186.55 Aligned_cols=242 Identities=13% Similarity=0.120 Sum_probs=154.9
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCC
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWR 830 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~ 830 (1024)
+|++||||||+++++.+.+.++++|++|+++ |+.|++||||++.++..+++++++. +++||+||+.|+.+.+
T Consensus 3 LIftDLDGTLLd~~~~~~~~a~~aL~~Lk~~----GI~vVlaTGRt~~ev~~l~~~Lgl~----~p~I~eNGA~I~~p~~ 74 (302)
T PRK12702 3 LVLSSLDGSLLDLEFNSYGAARQALAALERR----SIPLVLYSLRTRAQLEHLCRQLRLE----HPFICEDGSAIYVPEH 74 (302)
T ss_pred EEEEeCCCCCcCCCCcCCHHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHhCCC----CeEEEeCCcEEEEccc
Confidence 6679999999998778889999999999998 9999999999999999999998883 4799999999998732
Q ss_pred ccc-c---Ccchhh-----hhcccCCchhHHHHHhhhhhcc----CCCCcccccc-------------cCCCCceEEEEE
Q 001705 831 DMV-A---DGDYEA-----HVEYRWPGENVRSVVPRVARAE----DGAEDDIVGF-------------VDASSSRCQSYS 884 (1024)
Q Consensus 831 ~~~-~---d~~~~~-----~i~~~w~~~~v~~~l~~~~~~~----~~~~~~~~~~-------------~~~~~~~k~~~~ 884 (1024)
+. . +..+.. .+........++..+..+.... .+..++..+. ...+..|.-.+.
T Consensus 75 -~~~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SEp~~ 153 (302)
T PRK12702 75 -YFPAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSEIFS 153 (302)
T ss_pred -cccccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCcceE
Confidence 11 0 111100 1111122355666665544321 1111111100 011223333344
Q ss_pred ecCCCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEec------------------C---CCCHHHHHHHHHHHhCCC-
Q 001705 885 IKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVP------------------S---FASRIQALRYLSIRWGID- 942 (1024)
Q Consensus 885 ~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p------------------~---gasKg~AL~~L~~~~gi~- 942 (1024)
..+.. . ++++.+...+.+ ++ .++.|+.++. . +++||+|++.|.+.+.-.
T Consensus 154 w~~~~-~----~~~~~~~~~g~~--~~--~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~~~ 224 (302)
T PRK12702 154 YSGDP-A----RLREAFAQQEAN--LT--QHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQRHL 224 (302)
T ss_pred ecCCH-H----HHHHHHHHcCCe--EE--ecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHhcc
Confidence 32221 1 225666665543 22 4445788886 6 999999999999998754
Q ss_pred -CCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHHhc
Q 001705 943 -LSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAI 1021 (1024)
Q Consensus 943 -~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~ 1021 (1024)
.-.+++. |||.| | ++||+.+.++|++.+......+ |++-. -+=|...|+.. .|....+.|=.+++.++
T Consensus 225 ~~~~tiaL-GDspN-D-~~mLe~~D~~vvi~~~~~~~~~--~~~~~-----l~~~~~~~~~~-~a~~~GP~GW~e~v~~~ 293 (302)
T PRK12702 225 GPIKALGI-GCSPP-D-LAFLRWSEQKVVLPSPIADSLW--KEALR-----LGGPEVQPQWQ-LAQLPGPEGWNEVVLMW 293 (302)
T ss_pred CCceEEEe-cCChh-h-HHHHHhCCeeEEecCCCCCCcc--ccccc-----ccCcccCccce-ecCCCCcHHHHHHHHHH
Confidence 3368885 99999 9 9999999999999854422211 11111 00033445544 66777888888887764
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.4e-17 Score=180.98 Aligned_cols=218 Identities=9% Similarity=0.122 Sum_probs=140.1
Q ss_pred EEEecCCCCCC----C-chhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEE
Q 001705 752 IAADCYDSDGN----T-TETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELY 826 (1024)
Q Consensus 752 Ia~DlDGTl~~----~-~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~ 826 (1024)
|++|+||||.. | ...+++.++++|+.|.++ +++.|+|+|||++.++...+.-.++ +++++||++++
T Consensus 6 l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~---~~~~v~ivSGR~~~~~~~~~~~~~~------~l~g~hG~~~~ 76 (244)
T TIGR00685 6 FFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAAR---PHNAIWIISGRKFLEKWLGVKLPGL------GLAGEHGCEMK 76 (244)
T ss_pred EEEecCccccCCcCCCcccCCCHHHHHHHHHHHhC---CCCeEEEEECCChhhccccCCCCce------eEEeecCEEEe
Confidence 34999999654 3 245789999999999987 7888999999988777554322112 59999999998
Q ss_pred cCCCccccCcchhhhh--cccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCC-Cchhh---HHHHHHH
Q 001705 827 FPWRDMVADGDYEAHV--EYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPG-AETRK---VDNIRQR 900 (1024)
Q Consensus 827 ~~~~~~~~d~~~~~~i--~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~---~~el~~~ 900 (1024)
.. |... .|.... ...|. +.+..+...+... ++ ..+ +.+.+.++++++.. +.... +.++...
T Consensus 77 ~~-g~~~---~~~~~~~~~~~~~-~~~~~l~~~~~~~-pG---~~i----E~K~~s~~~hyr~a~d~~~~~~~~~~~~~~ 143 (244)
T TIGR00685 77 DN-GSCQ---DWVNLTEKIPSWK-VRANELREEITTR-PG---VFI----ERKGVALAWHYRQAPVPELARFRAKELKEK 143 (244)
T ss_pred cC-CCcc---eeeechhhhhhHH-HHHHHHHHHHhcC-CC---cEE----EecceEEEEEeccCCCcHHHHHHHHHHHHH
Confidence 63 2211 121110 01232 2333333333322 22 223 33557788887644 21111 2333333
Q ss_pred HHhcCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCC--------CceEEec
Q 001705 901 LRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGL--------HKTLILR 972 (1024)
Q Consensus 901 L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~a--------g~gVaMg 972 (1024)
+... ..+.++ .+..++|+.|.++|||.|++.++++++++.+++++| ||+.| | ++||+.+ +.+|+|+
T Consensus 144 ~~~~-~~~~v~--~g~~~~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~i-GD~~~-D-~~~~~~~~~~~~~~g~~~v~v~ 217 (244)
T TIGR00685 144 ILSF-TDLEVM--DGKAVVELKPRFVNKGEIVKRLLWHQPGSGISPVYL-GDDIT-D-EDAFRVVNNQWGNYGFYPVPIG 217 (244)
T ss_pred HhcC-CCEEEE--ECCeEEEEeeCCCCHHHHHHHHHHhcccCCCceEEE-cCCCc-H-HHHHHHHhcccCCCCeEEEEEe
Confidence 3221 233333 343599999999999999999999999998899886 99999 9 9999988 5889996
Q ss_pred CCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHHhc
Q 001705 973 GSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAI 1021 (1024)
Q Consensus 973 na~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~ 1021 (1024)
.+ +.+..|+ |+.. +.+++...|+.+
T Consensus 218 ----~g--~~~~~A~----------------~~~~--~~~~v~~~L~~l 242 (244)
T TIGR00685 218 ----SG--SKKTVAK----------------FHLT--GPQQVLEFLGLL 242 (244)
T ss_pred ----cC--CcCCCce----------------EeCC--CHHHHHHHHHHH
Confidence 33 3455566 6655 445588877664
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.6e-16 Score=171.16 Aligned_cols=288 Identities=26% Similarity=0.342 Sum_probs=205.0
Q ss_pred ceEEEEcCCChHH---HHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHH-HHhhhcCCEEEe
Q 001705 305 PYVIHGHYADAGE---VAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAE-ELGLDASEMVVT 380 (1024)
Q Consensus 305 pDvIh~h~~~~~~---~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e-~~~l~~Ad~Vi~ 380 (1024)
+|++|.+...... .........+.+.+...|.......... . .. ........ ..... ......++.+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~ 156 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLP--R--LL-LLLGLLRL--LLKRLKKALRLLADRVIA 156 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccc--c--ch-hhHHHHHH--HHHHHHHhccccccEEEE
Confidence 5999988764333 3455555668899999997643211000 0 00 00000000 01001 111124788888
Q ss_pred CCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCC
Q 001705 381 STRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRN 460 (1024)
Q Consensus 381 ~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1024)
.+..........+.. .++.++|++++...+.+...
T Consensus 157 ~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~--------------------- 191 (381)
T COG0438 157 VSPALKELLEALGVP------------------------NKIVVIPNGIDTEKFAPARI--------------------- 191 (381)
T ss_pred CCHHHHHHHHHhCCC------------------------CCceEecCCcCHHHcCcccc---------------------
Confidence 877543322111110 16889999999987754210
Q ss_pred CCcchHHHhhhhCCCC--CcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHH
Q 001705 461 LPPMWSEVMRFFTNPH--KPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLK 537 (1024)
Q Consensus 461 ~p~~~~~~~~~~~~~~--~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~ 537 (1024)
...++ ...++++||+.+.||++.+++++..+.. ..++..+ ++|.++.. ...+..
T Consensus 192 -----------~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~--~~~~~~~~~~g~~~~~----------~~~~~~ 248 (381)
T COG0438 192 -----------GLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKK--RGPDIKLVIVGDGPER----------REELEK 248 (381)
T ss_pred -----------CCCcccCceEEEEeeccChhcCHHHHHHHHHHhhh--hcCCeEEEEEcCCCcc----------HHHHHH
Confidence 00122 4799999999999999999999999953 3332444 77777642 233445
Q ss_pred HHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEe
Q 001705 538 LIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLV 617 (1024)
Q Consensus 538 ~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv 617 (1024)
.+.+++..+.|.|+|.++.+++..+|+.| |++++|+..|+||++++||||+|+|||+++.++..+++.++.+|+++
T Consensus 249 ~~~~~~~~~~v~~~g~~~~~~~~~~~~~~----~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~ 324 (381)
T COG0438 249 LAKKLGLEDNVKFLGYVPDEELAELLASA----DVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLV 324 (381)
T ss_pred HHHHhCCCCcEEEecccCHHHHHHHHHhC----CEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEec
Confidence 77777777899999999888999999989 99999999999999999999999999999999999999887778888
Q ss_pred CCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHhhh
Q 001705 618 DPHDQNAIADALLKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYLSHVEHSRN 671 (1024)
Q Consensus 618 ~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~~~ 671 (1024)
++.|.+++++++..++++++.++.+...+++.+ ..|+|+..++.+.+.+..+..
T Consensus 325 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (381)
T COG0438 325 PPGDVEELADALEQLLEDPELREELGEAARERVEEEFSWERIAEQLLELYEELLA 379 (381)
T ss_pred CCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 877899999999999999988888888777777 699999999999999887653
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.5e-16 Score=168.76 Aligned_cols=119 Identities=32% Similarity=0.485 Sum_probs=97.7
Q ss_pred EEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCC-CCH
Q 001705 482 ALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQ-SDV 559 (1024)
Q Consensus 482 ~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~-~el 559 (1024)
++|++.+.||++.+++|+..+.+ +.+++.+ ++|.+.+. ......+.+++...+|.+.|+++. +++
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~--~~~~~~~~i~G~~~~~-----------~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 175 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKE--RGPDLKLVIAGDGPER-----------EYLEELLAALLLLDRVIFLGGLDPEELL 175 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHH--hCCCeEEEEEeCCCCh-----------HHHHHHHHhcCCcccEEEeCCCCcHHHH
Confidence 99999999999999999999963 4466766 67776542 222233567778889999999855 455
Q ss_pred HHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEe
Q 001705 560 PDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLV 617 (1024)
Q Consensus 560 ~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv 617 (1024)
..+++.| |++++|+..|+||++++|||+||+|||+|+.++..|++.++.+|++|
T Consensus 176 ~~~~~~~----di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 176 ALLLAAA----DVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHhhcC----CEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 5555558 99999999999999999999999999999999999999888999875
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.2e-16 Score=178.35 Aligned_cols=201 Identities=14% Similarity=0.159 Sum_probs=131.3
Q ss_pred EEEEEecCCCCC----CCch-hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCce
Q 001705 750 IVIAADCYDSDG----NTTE-TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSE 824 (1024)
Q Consensus 750 llIa~DlDGTl~----~~~~-~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~ 824 (1024)
++|++|+||||. ++++ .++++++++|++|. + ++.|+|+|||++..+.+++.-.+ -++||+||++
T Consensus 112 ~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~----~~~vaIvSGR~~~~l~~~~~l~~------l~l~g~hGa~ 180 (366)
T PLN03017 112 IVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-K----CFPTAIVTGRCIDKVYNFVKLAE------LYYAGSHGMD 180 (366)
T ss_pred eEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-c----CCcEEEEeCCCHHHHHHhhcccC------ceEEEcCCcE
Confidence 455699999977 3665 79999999999999 5 78999999999999999854322 3799999999
Q ss_pred EEcCCCcccc---Ccchhh-hhcccCCchhHHHH---HhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHH
Q 001705 825 LYFPWRDMVA---DGDYEA-HVEYRWPGENVRSV---VPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNI 897 (1024)
Q Consensus 825 I~~~~~~~~~---d~~~~~-~i~~~w~~~~v~~~---l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el 897 (1024)
|..+.+.... +..+.. .....|. +.+..+ +..+... .+....+.+.+++++|++.... ....++
T Consensus 181 i~~p~~~~~~~~~~~~~~~~~~~~~~~-~~i~~v~~~L~~~~~~-------~pGa~VE~K~~~vavHyR~ad~-~~~~~l 251 (366)
T PLN03017 181 IKGPAKGFSRHKRVKQSLLYQPANDYL-PMIDEVYRQLLEKTKS-------TPGAKVENHKFCASVHFRCVDE-KKWSEL 251 (366)
T ss_pred EecCCCcceeccccccccccccchhhH-HHHHHHHHHHHHHHhc-------CCCCEEEecCcEEEEEcCcCCH-HHHHHH
Confidence 9875221110 000000 0111122 223333 3333332 2334455677899999976532 222334
Q ss_pred HHHHHhcCCe-EEEEEecCCeEEEEecC-CCCHHHHHHHHHHHhCCCC--CCEEEEeCCCCCCChHHhhcCC-----Cce
Q 001705 898 RQRLRMRGFR-CNLVYTRAGSRLNVVPS-FASRIQALRYLSIRWGIDL--SKMVVFVGEKGDTDYEDLLVGL-----HKT 968 (1024)
Q Consensus 898 ~~~L~~~~~~-~~v~~s~~~~~lEI~p~-gasKg~AL~~L~~~~gi~~--~~vvafiGDs~N~D~~~Ml~~a-----g~g 968 (1024)
...+...... ..+...++.+.+||.|. +.+||.|+++|++.+++.. ..+++|+||+.+ | ++||+.+ |.|
T Consensus 252 ~~~~~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~T-D-EDaF~~L~~~~~G~g 329 (366)
T PLN03017 252 VLQVRSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRT-D-EDAFKMLRDRGEGFG 329 (366)
T ss_pred HHHHHHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCc-c-HHHHHHHhhcCCceE
Confidence 3333321000 11333455569999995 9999999999999998763 346677899999 9 9999955 678
Q ss_pred EEec
Q 001705 969 LILR 972 (1024)
Q Consensus 969 VaMg 972 (1024)
|.+|
T Consensus 330 I~VG 333 (366)
T PLN03017 330 ILVS 333 (366)
T ss_pred EEEC
Confidence 8888
|
|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.5e-16 Score=189.42 Aligned_cols=337 Identities=15% Similarity=0.179 Sum_probs=218.0
Q ss_pred CcceEEEEcCCChHHHHHHHHcc--------------CCCCEEEEeCCCchhh---hH-HHHh---------cCCCCcch
Q 001705 303 TWPYVIHGHYADAGEVAAHLSGA--------------LNVPMVLTGHSLGRNK---FE-QLLK---------QGRLPKDI 355 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~a~~l~~~--------------~~ipiV~t~H~l~~~~---~~-~l~~---------~g~~~~~i 355 (1024)
.+||+||+|+|++++++..+.+. ....+|||.|++.+.- +. .++. .|.....+
T Consensus 160 ~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~~~gl~~~~~ 239 (601)
T TIGR02094 160 IDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAANLGLPREQL 239 (601)
T ss_pred CCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhhHhCCCHHHH
Confidence 58999999999999888775321 1366899999974332 21 1110 11100000
Q ss_pred hhHHHHH----HHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCC
Q 001705 356 NASYKIM----RRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDF 431 (1024)
Q Consensus 356 ~~~y~~~----r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~ 431 (1024)
....... ..+..-+..+..|+.|.++|+.+.+-..+++..+.+.. .....++.-|-||||+
T Consensus 240 ~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l~~~~---------------~~~~~~i~gItNGId~ 304 (601)
T TIGR02094 240 LALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFLYPGY---------------EEEEVPIGYVTNGVHN 304 (601)
T ss_pred HhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhhhhhc---------------ccccCCccceeCCccc
Confidence 0000000 11223356788999999999877774333332221100 0011258889999999
Q ss_pred CCccccCCCCCCcccccc-ccCc---------cccc--cCCCCcch-------HHHhh----------------------
Q 001705 432 SYVTTQDTMGGDTDLKSL-IGND---------RTQS--KRNLPPMW-------SEVMR---------------------- 470 (1024)
Q Consensus 432 ~~f~~~~~~~~~~~~~~~-~~~~---------~~~~--~~~~p~~~-------~~~~~---------------------- 470 (1024)
..+.|... ..+-.. .+.+ .+.. ..+....| ..+.+
T Consensus 305 ~~W~~~~~----~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~ 380 (601)
T TIGR02094 305 PTWVAPEL----RDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMA 380 (601)
T ss_pred cccCCHHH----HHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhh
Confidence 98876541 111110 0000 0000 00000000 01111
Q ss_pred h--hCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCC--CcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCC
Q 001705 471 F--FTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLREL--ANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLY 545 (1024)
Q Consensus 471 ~--~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~--~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~ 545 (1024)
+ ...++.++|++++|+...||.+.+++++.++..+..+ ..+++ ++|.+...+.+ ..++...+..+.++....
T Consensus 381 ~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~---gk~~i~~i~~la~~~~~~ 457 (601)
T TIGR02094 381 TDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGE---GKEIIQRIVEFSKRPEFR 457 (601)
T ss_pred hccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccch---HHHHHHHHHHHHhcccCC
Confidence 1 1357889999999999999999999999888532221 23555 66776543332 235677777887776677
Q ss_pred CCEEeCCCCCCCCHHHHHHHhhcCCcEEEe-cCC-CCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCC----
Q 001705 546 GQVAYPKHHKQSDVPDIYRLAAKTKGVFIN-PAL-VEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDP---- 619 (1024)
Q Consensus 546 ~~V~~~g~~~~~el~~ly~~A~~~~dv~v~-ps~-~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p---- 619 (1024)
++|.|+-..+.+--..+|+.| |++++ |+. +|++|++=+=||..|.+.+++..|+..|.. ++.||+.+.+
T Consensus 458 ~kv~f~~~Yd~~lA~~i~aG~----Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~ 532 (601)
T TIGR02094 458 GRIVFLENYDINLARYLVSGV----DVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEEY 532 (601)
T ss_pred CCEEEEcCCCHHHHHHHhhhh----eeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCccc
Confidence 889886655443344555556 99999 888 999999999999999999999999998887 5689999984
Q ss_pred --------CCHHHHHHHHHHHH-----hC-----HHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHH
Q 001705 620 --------HDQNAIADALLKLL-----AD-----KNMWSECRKNGLKNI-HRFSWPEHCRNYLSHV 666 (1024)
Q Consensus 620 --------~d~~~la~aI~~ll-----~d-----~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~ 666 (1024)
.|.++|-++|.+.+ ++ |..|.++.+++++.. ..|||.+.+++|.+.|
T Consensus 533 ~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 533 DDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 78999999997766 23 667999999999986 6999999999999886
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.3e-16 Score=179.79 Aligned_cols=204 Identities=14% Similarity=0.165 Sum_probs=133.8
Q ss_pred EEEecCCCCC----CC-chhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEE
Q 001705 752 IAADCYDSDG----NT-TETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELY 826 (1024)
Q Consensus 752 Ia~DlDGTl~----~~-~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~ 826 (1024)
+++|.||||. +| ...++++++++|+.|.+. ..++|+|||+...+..++...++ +++++||.++.
T Consensus 122 LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~-----~~VAIVSGR~~~~L~~~l~~~~l------~laGsHG~e~~ 190 (384)
T PLN02580 122 LFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY-----FPTAIISGRSRDKVYELVGLTEL------YYAGSHGMDIM 190 (384)
T ss_pred EEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC-----CCEEEEeCCCHHHHHHHhCCCCc------cEEEeCCceee
Confidence 3389999954 34 446789999999999876 36999999999999999976555 59999999997
Q ss_pred cCCCccccCcchhhh---------------hcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCc-
Q 001705 827 FPWRDMVADGDYEAH---------------VEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAE- 890 (1024)
Q Consensus 827 ~~~~~~~~d~~~~~~---------------i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~- 890 (1024)
.+.+... ...|... ....|. +.+..++..+...... .+....+.+.+++++|++....
T Consensus 191 ~p~~~~~-~~~~~~~~~~~~~~g~~~~~~~~a~~~~-~~i~~v~~~l~e~~~~----~pGs~VE~K~~svavHYR~a~~~ 264 (384)
T PLN02580 191 GPVRESV-SNDHPNCIKSTDQQGKEVNLFQPASEFL-PMIDEVFRSLVESTKD----IKGAKVENHKFCVSVHYRNVDEK 264 (384)
T ss_pred cCCCCcc-cccccccccccccccccccccccchhhh-hhHHHHHHHHHHHhcc----CCCCEEEecCcEEEEEeCCCCch
Confidence 6522110 0111110 011222 2223333332221111 2334445677899999975432
Q ss_pred --hhhHHHHHHHHHhcCCeEEEEEecCCeEEEEec-CCCCHHHHHHHHHHHhCCCCCC-E--EEEeCCCCCCChHHhhcC
Q 001705 891 --TRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVP-SFASRIQALRYLSIRWGIDLSK-M--VVFVGEKGDTDYEDLLVG 964 (1024)
Q Consensus 891 --~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p-~gasKg~AL~~L~~~~gi~~~~-v--vafiGDs~N~D~~~Ml~~ 964 (1024)
....+++...+... ..+.++ ++..++||.| .++|||.|+++|++++|++.++ + ++ +||+.| | ++||+.
T Consensus 265 ~~~~~~~~l~~~l~~~-~~l~v~--~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~-iGDD~T-D-edmF~~ 338 (384)
T PLN02580 265 NWPLVAQCVHDVLKKY-PRLRLT--HGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIY-IGDDRT-D-EDAFKV 338 (384)
T ss_pred HHHHHHHHHHHHHHhC-CceEEE--eCCeEEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEE-ECCCch-H-HHHHHh
Confidence 12223334334332 224443 3334999999 5999999999999999998764 3 45 599999 9 999995
Q ss_pred -----CCceEEecCCCCCChHHH
Q 001705 965 -----LHKTLILRGSVMYGSEKL 982 (1024)
Q Consensus 965 -----ag~gVaMgna~~NA~~el 982 (1024)
.|+||+|+ ||.++.
T Consensus 339 L~~~~~G~~I~Vg----n~~~~t 357 (384)
T PLN02580 339 LREGNRGYGILVS----SVPKES 357 (384)
T ss_pred hhccCCceEEEEe----cCCCCc
Confidence 59999999 876543
|
|
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.6e-15 Score=171.08 Aligned_cols=244 Identities=12% Similarity=0.111 Sum_probs=162.4
Q ss_pred Ccc-eEEEEcCCCh-H--HHHHHHH--ccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCC
Q 001705 303 TWP-YVIHGHYADA-G--EVAAHLS--GALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASE 376 (1024)
Q Consensus 303 ~~p-DvIh~h~~~~-~--~~a~~l~--~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad 376 (1024)
.++ |+||+|++.. + +...++. ++.++|+|+++|++++..+.. . .+ + ..++...++.||
T Consensus 62 ~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~---~---------~~--~--~~~~~~~~~~aD 125 (333)
T PRK09814 62 LKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDS---N---------YY--L--MKEEIDMLNLAD 125 (333)
T ss_pred CCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccc---c---------ch--h--hHHHHHHHHhCC
Confidence 345 9999998743 2 1122222 234899999999986542210 0 00 1 223677899999
Q ss_pred EEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCcccc
Q 001705 377 MVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQ 456 (1024)
Q Consensus 377 ~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~ 456 (1024)
.|+++|+...+.+... |....++.++++..+.....+..
T Consensus 126 ~iI~~S~~~~~~l~~~-----------------------g~~~~~i~~~~~~~~~~~~~~~~------------------ 164 (333)
T PRK09814 126 VLIVHSKKMKDRLVEE-----------------------GLTTDKIIVQGIFDYLNDIELVK------------------ 164 (333)
T ss_pred EEEECCHHHHHHHHHc-----------------------CCCcCceEecccccccccccccc------------------
Confidence 9999999887765321 11123677776654332110000
Q ss_pred ccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHH
Q 001705 457 SKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTV 535 (1024)
Q Consensus 457 ~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i 535 (1024)
.....+.|+|+|++....++ .. . .+++.| ++|.++...
T Consensus 165 ----------------~~~~~~~i~yaG~l~k~~~l----~~---~-----~~~~~l~i~G~g~~~~------------- 203 (333)
T PRK09814 165 ----------------TPSFQKKINFAGNLEKSPFL----KN---W-----SQGIKLTVFGPNPEDL------------- 203 (333)
T ss_pred ----------------cccCCceEEEecChhhchHH----Hh---c-----CCCCeEEEECCCcccc-------------
Confidence 01345689999999843321 11 1 134444 788876421
Q ss_pred HHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecC-C----------CCCCCHHHHHHHHcCCcEEEcCCCCc
Q 001705 536 LKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPA-L----------VEPFGLTIIEAAAYGLPVVATKNGGP 604 (1024)
Q Consensus 536 ~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps-~----------~Egfgl~llEAmA~G~PVVat~~Gg~ 604 (1024)
...++|.|.|+++.++++.+|+.. +.+++. . .-.+|.++.||||||+|||+++.|+.
T Consensus 204 -------~~~~~V~f~G~~~~eel~~~l~~~-----~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~ 271 (333)
T PRK09814 204 -------ENSANISYKGWFDPEELPNELSKG-----FGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAI 271 (333)
T ss_pred -------ccCCCeEEecCCCHHHHHHHHhcC-----cCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccH
Confidence 244689999999999999999874 333321 1 13578899999999999999999999
Q ss_pred hhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHH
Q 001705 605 VDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCR 660 (1024)
Q Consensus 605 ~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~ 660 (1024)
.++|+++.+|++++ +.++++++|.++ .++.+++|++++++..+.+.--...+
T Consensus 272 ~~~V~~~~~G~~v~--~~~el~~~l~~~--~~~~~~~m~~n~~~~~~~~~~g~~~~ 323 (333)
T PRK09814 272 ADFIVENGLGFVVD--SLEELPEIIDNI--TEEEYQEMVENVKKISKLLRNGYFTK 323 (333)
T ss_pred HHHHHhCCceEEeC--CHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 99999999999998 788999999985 35778899999998875444333333
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.6e-16 Score=183.36 Aligned_cols=283 Identities=16% Similarity=0.107 Sum_probs=178.9
Q ss_pred HHHHHHHHHhhhcCCCCCcceEEEEcC-CChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHH
Q 001705 286 IVNMARAIGEQVNGGKPTWPYVIHGHY-ADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRR 364 (1024)
Q Consensus 286 ~~~~~~~l~~~~~~g~~~~pDvIh~h~-~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~ 364 (1024)
+..+.+.+.+ .+||+||+|. ...++.+++++..+++|++++.+++-. .+.....+. ...|.
T Consensus 75 ~~~l~~~l~~-------~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~~s--------~~~~~~~~~---~~~r~ 136 (365)
T TIGR00236 75 LEGLEELLLE-------EKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRT--------GDRYSPMPE---EINRQ 136 (365)
T ss_pred HHHHHHHHHH-------cCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCCCc--------CCCCCCCcc---HHHHH
Confidence 3445555554 5899999995 466677888888889999876554300 011000000 01111
Q ss_pred HHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCC-CCCCccccCCCCCC
Q 001705 365 IEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGM-DFSYVTTQDTMGGD 443 (1024)
Q Consensus 365 i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGi-D~~~f~~~~~~~~~ 443 (1024)
...+.||.++++|+...+.+.+. |....++.+++|++ |...+....
T Consensus 137 -----~~~~~ad~~~~~s~~~~~~l~~~-----------------------G~~~~~I~vign~~~d~~~~~~~~----- 183 (365)
T TIGR00236 137 -----LTGHIADLHFAPTEQAKDNLLRE-----------------------NVKADSIFVTGNTVIDALLTNVEI----- 183 (365)
T ss_pred -----HHHHHHHhccCCCHHHHHHHHHc-----------------------CCCcccEEEeCChHHHHHHHHHhh-----
Confidence 12335899999999887775332 22334899999996 432211110
Q ss_pred ccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEe-CC-CCCCCHHHHHHHHhhccccCCCCcEEEE-EecCCC
Q 001705 444 TDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALS-RP-DPKKNVTTLLKAFGECQPLRELANMTLI-LGNRDD 520 (1024)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vg-Rl-d~~Kgi~~ll~A~~~l~~l~~~~~l~LI-vG~~~~ 520 (1024)
+.......++. .+++++++.+ |. ...||+..+++|+.++. ...+++.++ ++.+..
T Consensus 184 ------------------~~~~~~~~~~~--~~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~--~~~~~~~~vi~~~~~~ 241 (365)
T TIGR00236 184 ------------------AYSSPVLSEFG--EDKRYILLTLHRRENVGEPLENIFKAIREIV--EEFEDVQIVYPVHLNP 241 (365)
T ss_pred ------------------ccchhHHHhcC--CCCCEEEEecCchhhhhhHHHHHHHHHHHHH--HHCCCCEEEEECCCCh
Confidence 00001111221 2345666666 43 24589999999999884 334555543 333211
Q ss_pred cccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEc-
Q 001705 521 IEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVAT- 599 (1024)
Q Consensus 521 ~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat- 599 (1024)
..... +...++..++|.|++.++..++..+|+.| |+++.+| |..++|||+||+|||++
T Consensus 242 ---------~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~l~~a----d~vv~~S-----g~~~~EA~a~g~PvI~~~ 300 (365)
T TIGR00236 242 ---------VVREP---LHKHLGDSKRVHLIEPLEYLDFLNLAANS----HLILTDS-----GGVQEEAPSLGKPVLVLR 300 (365)
T ss_pred ---------HHHHH---HHHHhCCCCCEEEECCCChHHHHHHHHhC----CEEEECC-----hhHHHHHHHcCCCEEECC
Confidence 01111 22334556789999999999999999999 8998877 56689999999999996
Q ss_pred CCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 001705 600 KNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLS 664 (1024)
Q Consensus 600 ~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~ 664 (1024)
+.|+..+++..+ .++++ +.|+++++++|.+++++++.+++++.+...+....+++++++...+
T Consensus 301 ~~~~~~e~~~~g-~~~lv-~~d~~~i~~ai~~ll~~~~~~~~~~~~~~~~g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 301 DTTERPETVEAG-TNKLV-GTDKENITKAAKRLLTDPDEYKKMSNASNPYGDGEASERIVEELLN 363 (365)
T ss_pred CCCCChHHHhcC-ceEEe-CCCHHHHHHHHHHHHhChHHHHHhhhcCCCCcCchHHHHHHHHHHh
Confidence 678888888755 56667 5799999999999999999888887665322234455555544433
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.7e-15 Score=172.92 Aligned_cols=171 Identities=16% Similarity=0.137 Sum_probs=116.3
Q ss_pred hhhCCCCCcEEEE-Ee-CCCCC-CCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHc-CC
Q 001705 470 RFFTNPHKPTILA-LS-RPDPK-KNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKY-DL 544 (1024)
Q Consensus 470 ~~~~~~~~~~Il~-vg-Rld~~-Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~-~l 544 (1024)
++..++++++|+. .| |.... ++++.+++|+..+. +..+++.+ ++|+.+. ...++.+.+.++ ++
T Consensus 179 ~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~--~~~~~~~~ii~~~~~~----------~~~~~~~~~~~~~~~ 246 (380)
T PRK00025 179 RLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQ--QRYPDLRFVLPLVNPK----------RREQIEEALAEYAGL 246 (380)
T ss_pred HcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH--HhCCCeEEEEecCChh----------hHHHHHHHHhhcCCC
Confidence 3444556676544 34 44343 45789999999884 33456665 4443121 234455556665 54
Q ss_pred CCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEc-----------------CCCCchhh
Q 001705 545 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVAT-----------------KNGGPVDI 607 (1024)
Q Consensus 545 ~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat-----------------~~Gg~~ei 607 (1024)
. +.+. ..++..+|+.| |++|.+| |.+.+|||+||+|+|++ +.++.+++
T Consensus 247 ~--v~~~----~~~~~~~~~~a----Dl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~ 311 (380)
T PRK00025 247 E--VTLL----DGQKREAMAAA----DAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNL 311 (380)
T ss_pred C--eEEE----cccHHHHHHhC----CEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHH
Confidence 3 4442 35899999999 9999987 88889999999999987 56677788
Q ss_pred hccCC--cEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 001705 608 LKALN--NGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEH 668 (1024)
Q Consensus 608 i~~~~--~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~ 668 (1024)
+.++. .+++.+..|+++++++|.++++|++.++++++++.+..+.. -..-+++..+.+.+
T Consensus 312 ~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~ 373 (380)
T PRK00025 312 LAGRELVPELLQEEATPEKLARALLPLLADGARRQALLEGFTELHQQL-RCGADERAAQAVLE 373 (380)
T ss_pred hcCCCcchhhcCCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHH
Confidence 76653 45777888999999999999999999999999876555332 12233444444443
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.2e-15 Score=172.15 Aligned_cols=250 Identities=17% Similarity=0.108 Sum_probs=163.5
Q ss_pred CcceEEEEcCC-ChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeC
Q 001705 303 TWPYVIHGHYA-DAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTS 381 (1024)
Q Consensus 303 ~~pDvIh~h~~-~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~ 381 (1024)
.+||+||+|.. ...+.+.+.++..++|++++.|+.... ..+ .+. ...+ ..+.+.+|.++++
T Consensus 87 ~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~------~~~----~~~---~~~r-----~~~~~~ad~~~~~ 148 (363)
T cd03786 87 EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSF------DRG----MPD---EENR-----HAIDKLSDLHFAP 148 (363)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccC------CCC----CCc---hHHH-----HHHHHHhhhccCC
Confidence 47999999964 455666777777899999877653110 001 010 1111 1235678999999
Q ss_pred CHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCC-CCCCccccCCCCCCccccccccCccccccCC
Q 001705 382 TRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGM-DFSYVTTQDTMGGDTDLKSLIGNDRTQSKRN 460 (1024)
Q Consensus 382 S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGi-D~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1024)
|+...+.+.+. |....++.+++|++ |...+.+...
T Consensus 149 s~~~~~~l~~~-----------------------G~~~~kI~vign~v~d~~~~~~~~~--------------------- 184 (363)
T cd03786 149 TEEARRNLLQE-----------------------GEPPERIFVVGNTMIDALLRLLELA--------------------- 184 (363)
T ss_pred CHHHHHHHHHc-----------------------CCCcccEEEECchHHHHHHHHHHhh---------------------
Confidence 98877664321 22334899999985 5433221110
Q ss_pred CCcchHHHhhhhCCCCCcEEEEEeCCCC---CCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHH
Q 001705 461 LPPMWSEVMRFFTNPHKPTILALSRPDP---KKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLK 537 (1024)
Q Consensus 461 ~p~~~~~~~~~~~~~~~~~Il~vgRld~---~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~ 537 (1024)
.. ......+...++..++++.+|... .||++.+++|+.++.. . ++.+++++.+. ...++.+
T Consensus 185 -~~-~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~--~--~~~vi~~~~~~----------~~~~l~~ 248 (363)
T cd03786 185 -KK-ELILELLGLLPKKYILVTLHRVENVDDGEQLEEILEALAELAE--E--DVPVVFPNHPR----------TRPRIRE 248 (363)
T ss_pred -cc-chhhhhcccCCCCEEEEEeCCccccCChHHHHHHHHHHHHHHh--c--CCEEEEECCCC----------hHHHHHH
Confidence 00 000112223344456778888774 7999999999998842 1 45554433221 1345566
Q ss_pred HHHHcCC-CCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCC-CCchhhhccCCcEE
Q 001705 538 LIDKYDL-YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKN-GGPVDILKALNNGL 615 (1024)
Q Consensus 538 ~i~~~~l-~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~-Gg~~eii~~~~~Gl 615 (1024)
.+.++++ .++|.|.+....+++..+|+.| |++|.+|. | +..|||++|+|+|++.. +..++.+. +|+
T Consensus 249 ~~~~~~~~~~~v~~~~~~~~~~~~~l~~~a----d~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~---~g~ 316 (363)
T cd03786 249 AGLEFLGHHPNVLLISPLGYLYFLLLLKNA----DLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVE---SGT 316 (363)
T ss_pred HHHhhccCCCCEEEECCcCHHHHHHHHHcC----cEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhh---eee
Confidence 6667665 6689999988888999999999 99999984 4 47899999999999975 44556665 344
Q ss_pred EeCC-CCHHHHHHHHHHHHhCHHHHHHH
Q 001705 616 LVDP-HDQNAIADALLKLLADKNMWSEC 642 (1024)
Q Consensus 616 lv~p-~d~~~la~aI~~ll~d~~~~~~~ 642 (1024)
.+.. .|+++++++|.++++++..++.+
T Consensus 317 ~~~~~~~~~~i~~~i~~ll~~~~~~~~~ 344 (363)
T cd03786 317 NVLVGTDPEAILAAIEKLLSDEFAYSLM 344 (363)
T ss_pred EEecCCCHHHHHHHHHHHhcCchhhhcC
Confidence 4433 37999999999999998776655
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.66 E-value=2e-15 Score=168.23 Aligned_cols=199 Identities=15% Similarity=0.200 Sum_probs=131.2
Q ss_pred EEEEecCCCCC----CCch-hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceE
Q 001705 751 VIAADCYDSDG----NTTE-TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSEL 825 (1024)
Q Consensus 751 lIa~DlDGTl~----~~~~-~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I 825 (1024)
++++|+||||. +|+. .++++++++|++|.+ +..++|+|||++..+..++...++ +++++||+++
T Consensus 100 ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~-----~~~vaIvSGR~~~~l~~~~~~~~l------~laGsHG~e~ 168 (354)
T PLN02151 100 VMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAK-----CFPTAIVSGRCREKVSSFVKLTEL------YYAGSHGMDI 168 (354)
T ss_pred EEEEecCccCCCCCCCcccccCCHHHHHHHHHHhc-----CCCEEEEECCCHHHHHHHcCCccc------eEEEeCCcee
Confidence 44499999977 6755 789999999999985 468999999999999999865444 6999999999
Q ss_pred EcCCCccccCcchh-------hhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHH
Q 001705 826 YFPWRDMVADGDYE-------AHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIR 898 (1024)
Q Consensus 826 ~~~~~~~~~d~~~~-------~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~ 898 (1024)
..+.+. ..|. ......|. +.+..++..+...... .+....+.+.+++++|++..... ...++.
T Consensus 169 ~~p~~g----~~~~~~~~~~~~~~~~~~~-~~i~~v~~~l~~~~~~----~pG~~VE~K~~slavHYR~a~~~-~~~~l~ 238 (354)
T PLN02151 169 KGPEQG----SKYKKENQSLLCQPATEFL-PVINEVYKKLVEKTKS----IPGAKVENNKFCASVHFRCVEEN-KWSDLA 238 (354)
T ss_pred ecCCCC----ccccccccccccccchhhH-HHHHHHHHHHHHHHhc----CCCCEEEecCcEEEEEeCCCChH-HHHHHH
Confidence 865211 1121 11122232 3333333333211111 23344456778999999765421 223344
Q ss_pred HHHHhcCCeE-EEEEecCCeEEEEecC-CCCHHHHHHHHHHHhCCCCC--CEEEEeCCCCCCChHHhhcCC-----CceE
Q 001705 899 QRLRMRGFRC-NLVYTRAGSRLNVVPS-FASRIQALRYLSIRWGIDLS--KMVVFVGEKGDTDYEDLLVGL-----HKTL 969 (1024)
Q Consensus 899 ~~L~~~~~~~-~v~~s~~~~~lEI~p~-gasKg~AL~~L~~~~gi~~~--~vvafiGDs~N~D~~~Ml~~a-----g~gV 969 (1024)
+.+....... .+...++.+.+||.|. +++||.|+++|++.++..-. .+++|+||+.+ | ++||+.+ |.||
T Consensus 239 ~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~T-D-EDaF~~L~~~~~G~gI 316 (354)
T PLN02151 239 NQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRT-D-EDAFKILRDKKQGLGI 316 (354)
T ss_pred HHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCc-H-HHHHHHHhhcCCCccE
Confidence 4433211111 1233455569999995 99999999999999886532 45677899999 9 9999853 6778
Q ss_pred Eec
Q 001705 970 ILR 972 (1024)
Q Consensus 970 aMg 972 (1024)
.++
T Consensus 317 ~Vg 319 (354)
T PLN02151 317 LVS 319 (354)
T ss_pred Eec
Confidence 887
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.9e-13 Score=143.12 Aligned_cols=402 Identities=16% Similarity=0.127 Sum_probs=247.4
Q ss_pred CCCceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCC
Q 001705 166 SSRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSD 245 (1024)
Q Consensus 166 ~~~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~ 245 (1024)
+.++-+++++.... .||. . ....=|..|++.| ++|+++.-..+-| -+.+
T Consensus 9 ~~~k~ra~vvVLGD--------vGRS------P-RMqYHA~Sla~~g--f~VdliGy~~s~p---------~e~l----- 57 (444)
T KOG2941|consen 9 KSKKKRAIVVVLGD--------VGRS------P-RMQYHALSLAKLG--FQVDLIGYVESIP---------LEEL----- 57 (444)
T ss_pred ccccceEEEEEecc--------cCCC------h-HHHHHHHHHHHcC--CeEEEEEecCCCC---------hHHH-----
Confidence 34455677666431 3442 2 3344678899999 9999996653212 1211
Q ss_pred CCCCCCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC---ChHHHHHHH
Q 001705 246 GTGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYA---DAGEVAAHL 322 (1024)
Q Consensus 246 ~~~~~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~---~~~~~a~~l 322 (1024)
-..+.++|+.+|.-|...+.++ +....+....++...+..++.. ..||+|.++++ ....++.+.
T Consensus 58 -~~hprI~ih~m~~l~~~~~~p~---------~~~l~lKvf~Qfl~Ll~aL~~~---~~~~~ilvQNPP~iPtliv~~~~ 124 (444)
T KOG2941|consen 58 -LNHPRIRIHGMPNLPFLQGGPR---------VLFLPLKVFWQFLSLLWALFVL---RPPDIILVQNPPSIPTLIVCVLY 124 (444)
T ss_pred -hcCCceEEEeCCCCcccCCCch---------hhhhHHHHHHHHHHHHHHHHhc---cCCcEEEEeCCCCCchHHHHHHH
Confidence 2357999999987665322222 1112222222222222222222 35899999987 355666667
Q ss_pred HccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHH
Q 001705 323 SGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLER 402 (1024)
Q Consensus 323 ~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r 402 (1024)
+...+.+++...|+++.. +.--+..|.... .-++.++. |+..-+.||.-.|+|+.+.+++.+.++-
T Consensus 125 ~~l~~~KfiIDWHNy~Ys-l~l~~~~g~~h~----lV~l~~~~--E~~fgk~a~~nLcVT~AMr~dL~qnWgi------- 190 (444)
T KOG2941|consen 125 SILTGAKFIIDWHNYGYS-LQLKLKLGFQHP----LVRLVRWL--EKYFGKLADYNLCVTKAMREDLIQNWGI------- 190 (444)
T ss_pred HHHhcceEEEEehhhHHH-HHHHhhcCCCCc----hHHHHHHH--HHHhhcccccchhhHHHHHHHHHHhcCC-------
Confidence 777899999999999876 333334454433 22333433 6777889999999999888776443321
Q ss_pred HHHHhhhcCccccCCCCCcEEEeCCCCCCCC--ccccCCCCCCccccccccCccccccCCCCcchHHHhh------hhCC
Q 001705 403 KLRVRRQRGVSCFGRFMPRMVVIPPGMDFSY--VTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMR------FFTN 474 (1024)
Q Consensus 403 ~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~------~~~~ 474 (1024)
.+-..+|.++..+ |..+|..+ |.+... +-.....+... ...-.......+ +...
T Consensus 191 ------~ra~v~YDrPps~----~~~l~~~H~lf~~l~~-d~~~f~ar~~q-------~~~~~~taf~~k~~s~~v~~~~ 252 (444)
T KOG2941|consen 191 ------NRAKVLYDRPPSK----PTPLDEQHELFMKLAG-DHSPFRAREPQ-------DKALERTAFTKKDASGDVQLLP 252 (444)
T ss_pred ------ceeEEEecCCCCC----CCchhHHHHHHhhhcc-ccchhhhcccc-------cchhhhhhHhhhcccchhhhcc
Confidence 1122333333320 11111100 211110 00000000000 000000001111 1112
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHhhc-----cccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCE
Q 001705 475 PHKPTILALSRPDPKKNVTTLLKAFGEC-----QPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQV 548 (1024)
Q Consensus 475 ~~~~~Il~vgRld~~Kgi~~ll~A~~~l-----~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V 548 (1024)
....++++.-...|..++..|++|+... .+-...|++.. |-|.||. .+...+.|+++++...-
T Consensus 253 ~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPl-----------kE~Y~~~I~~~~~~~v~ 321 (444)
T KOG2941|consen 253 ERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPL-----------KEKYSQEIHEKNLQHVQ 321 (444)
T ss_pred CCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCch-----------hHHHHHHHHHhccccee
Confidence 2334666777789999999999999833 22245577765 5577764 45566888999998766
Q ss_pred EeCCCCCCCCHHHHHHHhhcCCcEEEecCCC-CCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHH
Q 001705 549 AYPKHHKQSDVPDIYRLAAKTKGVFINPALV-EPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIAD 627 (1024)
Q Consensus 549 ~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~-Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~ 627 (1024)
....++..+|.+.+++.|+ -+|++.+|.. =-.|+++.....||+||+|-+.....|+|.++.||++++ |.+++|+
T Consensus 322 ~~tpWL~aEDYP~ll~saD--lGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh~eNGlvF~--Ds~eLa~ 397 (444)
T KOG2941|consen 322 VCTPWLEAEDYPKLLASAD--LGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELVKHGENGLVFE--DSEELAE 397 (444)
T ss_pred eeecccccccchhHhhccc--cceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHHHhcCCCceEec--cHHHHHH
Confidence 6689999999999999992 2344555543 356899999999999999999999999999999999998 9999999
Q ss_pred HHHHHHh----CHHHHHHHHHHHHHHHhcCCHHHHH
Q 001705 628 ALLKLLA----DKNMWSECRKNGLKNIHRFSWPEHC 659 (1024)
Q Consensus 628 aI~~ll~----d~~~~~~~~~~~~~~~~~fsw~~~a 659 (1024)
.|..+++ +.++..+..+++++. +...|+..-
T Consensus 398 ql~~lf~~fp~~a~~l~~lkkn~~e~-~e~RW~~~W 432 (444)
T KOG2941|consen 398 QLQMLFKNFPDNADELNQLKKNLREE-QELRWDESW 432 (444)
T ss_pred HHHHHHhcCCCCHHHHHHHHHhhHHH-HhhhHHHHH
Confidence 9999999 788888888888887 455565433
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.1e-14 Score=152.30 Aligned_cols=204 Identities=13% Similarity=0.165 Sum_probs=139.4
Q ss_pred CCCCcccceeEEEEEecCCCCCC----C-chhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCC
Q 001705 740 THSPGRRQMLIVIAADCYDSDGN----T-TETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDF 814 (1024)
Q Consensus 740 ~~~~~~~~rlllIa~DlDGTl~~----~-~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~ 814 (1024)
..|...++++++ +|.||||.. | ...++++++++|+.|.++ +.+.++|+|||+..++..++.-.++
T Consensus 11 ~~~~~a~~~~~~--lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~---~~~~v~iiSGR~~~~l~~~~~v~~i----- 80 (266)
T COG1877 11 EPYLNARKRLLF--LDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASD---PRNVVAIISGRSLAELERLFGVPGI----- 80 (266)
T ss_pred cccccccceEEE--EeccccccccccCccccCCCHHHHHHHHHHHhc---CCCeEEEEeCCCHHHHHHhcCCCCc-----
Confidence 344467788888 788888443 4 345679999999999998 6788999999999999999986555
Q ss_pred CEEEecCCceEEcCCCccccCcchhhhhcc---cCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCch
Q 001705 815 DAIVCNSGSELYFPWRDMVADGDYEAHVEY---RWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAET 891 (1024)
Q Consensus 815 d~lI~~nGa~I~~~~~~~~~d~~~~~~i~~---~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 891 (1024)
++||+||+++..++|.. |...... .|. +.+..+++.+...+++ ...+.+.+.+.||+++....
T Consensus 81 -~l~aehGa~~r~~~g~~-----~~~~~~~~~~~~~-~~v~~~l~~~v~r~pG-------s~iE~K~~a~~~Hyr~a~~~ 146 (266)
T COG1877 81 -GLIAEHGAEVRDPNGKW-----WINLAEEADLRWL-KEVAAILEYYVERTPG-------SYIERKGFAVALHYRNAEDD 146 (266)
T ss_pred -cEEEecceEEecCCCCe-----eEecCHHHHhhHH-HHHHHHHHHHhhcCCC-------eEEEEcCcEEEEeeccCCch
Confidence 59999999997764322 2211111 232 5667777777665443 33344567888888755422
Q ss_pred h-hHHHHHHHHHhcCCe-EEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCC---
Q 001705 892 R-KVDNIRQRLRMRGFR-CNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLH--- 966 (1024)
Q Consensus 892 ~-~~~el~~~L~~~~~~-~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag--- 966 (1024)
. ....+.+........ ++++. +. ..+|+.|.++|||.++++++++...+- .+++|+||+.. | ++||+.+.
T Consensus 147 ~~~~~a~~~~~~~~~~~~~~v~~-gk-~vVEvrp~~~~KG~a~~~i~~~~~~~~-~~~~~aGDD~T-D-E~~F~~v~~~~ 221 (266)
T COG1877 147 EGAALALAEAATLINELKLRVTP-GK-MVVELRPPGVSKGAAIKYIMDELPFDG-RFPIFAGDDLT-D-EDAFAAVNKLD 221 (266)
T ss_pred hhHHHHHHHHHhccccccEEEEe-Cc-eEEEEeeCCcchHHHHHHHHhcCCCCC-CcceecCCCCc-c-HHHHHhhccCC
Confidence 2 122222222222222 33333 33 499999999999999999999876654 46667899999 9 99999876
Q ss_pred -ceEEec
Q 001705 967 -KTLILR 972 (1024)
Q Consensus 967 -~gVaMg 972 (1024)
.+|-++
T Consensus 222 ~~~v~v~ 228 (266)
T COG1877 222 SITVKVG 228 (266)
T ss_pred CceEEec
Confidence 455555
|
|
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.7e-13 Score=167.71 Aligned_cols=187 Identities=17% Similarity=0.218 Sum_probs=148.7
Q ss_pred CCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCC--CcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEE
Q 001705 473 TNPHKPTILALSRPDPKKNVTTLLKAFGECQPLREL--ANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVA 549 (1024)
Q Consensus 473 ~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~--~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~ 549 (1024)
.+|+.++|+++.|+..+|+.+.++..+.++..+... ..+++ +.|.+...++ ....++..|..+.+.....++|.
T Consensus 474 ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~---~gK~iIk~i~~~a~~p~~~~kVv 550 (778)
T cd04299 474 LDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADE---PGKELIQEIVEFSRRPEFRGRIV 550 (778)
T ss_pred cCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccch---HHHHHHHHHHHHHhCcCCCCcEE
Confidence 357778999999999999999999998888543221 23555 5676643333 23567778888888777788999
Q ss_pred eCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCC--------
Q 001705 550 YPKHHKQSDVPDIYRLAAKTKGVFINPAL--VEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDP-------- 619 (1024)
Q Consensus 550 ~~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p-------- 619 (1024)
|+.-.+-+--..++..| ||+++||+ +|++|++=+-||.-|.+-+++..|...|.. ++.|||.+.+
T Consensus 551 fle~Yd~~lA~~LvaG~----DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~~~~~~~~ 625 (778)
T cd04299 551 FLEDYDMALARHLVQGV----DVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDGDEYEDDE 625 (778)
T ss_pred EEcCCCHHHHHHHHhhh----hhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCCccccChh
Confidence 87665544445566666 99999999 899999999999999999999999999987 7899999987
Q ss_pred ----CCHHHHHHHHHHHHh----C------HHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 001705 620 ----HDQNAIADALLKLLA----D------KNMWSECRKNGLKNI-HRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 620 ----~d~~~la~aI~~ll~----d------~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~ 667 (1024)
.|.++|-+.|.+.+. + |..|.++.+++++.+ ..|||.++++.|.+.+-
T Consensus 626 ~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 626 YQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred hcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 567777777765433 3 778999999999988 69999999999998775
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.56 E-value=7.3e-14 Score=166.35 Aligned_cols=167 Identities=15% Similarity=0.204 Sum_probs=143.5
Q ss_pred cEEEEEe--CCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCC---------
Q 001705 478 PTILALS--RPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLY--------- 545 (1024)
Q Consensus 478 ~~Il~vg--Rld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~--------- 545 (1024)
..+++++ |+ +.|.++.+|+|+..+. .+.|+..| +.|.+.+ . .....++++++++++.
T Consensus 320 ~~~I~v~idrL-~ek~~~~~I~av~~~~--~~~p~~~L~~~gy~~~-~-------~~~~~l~~~i~~~~~~~~~~~~~~~ 388 (519)
T TIGR03713 320 ETEIGFWIDGL-SDEELQQILQQLLQYI--LKNPDYELKILTYNND-N-------DITQLLEDILEQINEEYNQDKNFFS 388 (519)
T ss_pred ceEEEEEcCCC-ChHHHHHHHHHHHHHH--hhCCCeEEEEEEecCc-h-------hHHHHHHHHHHHHHhhhchhhhccc
Confidence 3566666 99 9999999999999985 56788887 4666542 1 1235555666666555
Q ss_pred --------------------CCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCch
Q 001705 546 --------------------GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPV 605 (1024)
Q Consensus 546 --------------------~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~ 605 (1024)
..|.|.|..+..++...|..| .++|.+|..|+|+ +.+||+++|+|+| +-|+.
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~a----rl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~ 460 (519)
T TIGR03713 389 LSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKL----RLIIDLSKEPDLY-TQISGISAGIPQI---NKVET 460 (519)
T ss_pred cchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhh----eEEEECCCCCChH-HHHHHHHcCCCee---ecCCc
Confidence 689999998777999999999 7999999999999 9999999999999 66779
Q ss_pred hhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 001705 606 DILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSH 665 (1024)
Q Consensus 606 eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~ 665 (1024)
++|.++.||++| +|..+|+++|..+|.+++.|+++...+.+.+.+||-+.+.+++.+.
T Consensus 461 ~~V~d~~NG~li--~d~~~l~~al~~~L~~~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 461 DYVEHNKNGYII--DDISELLKALDYYLDNLKNWNYSLAYSIKLIDDYSSENIIERLNEL 518 (519)
T ss_pred eeeEcCCCcEEe--CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHhh
Confidence 999999999999 4999999999999999999999999999999999999999888764
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=99.56 E-value=6.8e-15 Score=159.10 Aligned_cols=193 Identities=15% Similarity=0.220 Sum_probs=114.7
Q ss_pred EecCCCCCC----C-chhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcC
Q 001705 754 ADCYDSDGN----T-TETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFP 828 (1024)
Q Consensus 754 ~DlDGTl~~----~-~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~ 828 (1024)
+|.||||.. | ...+++.++++|++|.+. +++.|+|+|||+...+..+..-.++ .++++||+++..+
T Consensus 2 lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~---~~~~v~IvSGR~~~~~~~~~~~~~i------~l~gehG~e~~~~ 72 (235)
T PF02358_consen 2 LDYDGTLAPIVDDPDAAVPPPELRELLRALAAD---PNNTVAIVSGRSLDDLERFGGIPNI------GLAGEHGAEIRRP 72 (235)
T ss_dssp EE-TTTSS---S-GGG----HHHHHHHHHHHHH---SE--EEEE-SS-HHHHHHH-S-SS-------EEEEGGGTEEEET
T ss_pred cccCCccCCCCCCccccCCCHHHHHHHHHHhcc---CCCEEEEEEeCCHHHhHHhcCCCCc------eEEEEeeEEeccC
Confidence 799999554 3 345789999999999998 7788999999999996666554333 6999999999987
Q ss_pred CCccccCcchhh---hhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCch---hhHHHHHHHHH
Q 001705 829 WRDMVADGDYEA---HVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAET---RKVDNIRQRLR 902 (1024)
Q Consensus 829 ~~~~~~d~~~~~---~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~---~~~~el~~~L~ 902 (1024)
.+ ..|.. .....|. +.+...+..+....++ .. .+.+.++++|+++..... ..+.++.+.+.
T Consensus 73 ~~-----~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~pG---~~----iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~ 139 (235)
T PF02358_consen 73 GG-----SEWTNLPADEDLEWK-DEVREILEYFAERTPG---SF----IEDKEFSVAFHYRNAPPEFGEAQARELAEQLR 139 (235)
T ss_dssp TE------EEE-TTGGGGHHHH-HHHHHHHTTHHHHSTT----E----EEEETTEEEEE-TTS-ST----THHHHHHHHH
T ss_pred cc-----ccccccccccchHHH-HHHHHHHHHHHhhccC---cE----EEECCeEEEEEecCCCcchhhhHHHHHHHHHH
Confidence 32 12221 2223354 5566677666554433 22 334567888998654422 24556655554
Q ss_pred hc---CCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCC--CCCEEEEeCCCCCCChHHhhcCC------CceEEe
Q 001705 903 MR---GFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGID--LSKMVVFVGEKGDTDYEDLLVGL------HKTLIL 971 (1024)
Q Consensus 903 ~~---~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~--~~~vvafiGDs~N~D~~~Ml~~a------g~gVaM 971 (1024)
.. ...++++... ..+||.|.+++||.|+++|++.++.. ..++++|+||+.+ | ++||+.+ |.+|.+
T Consensus 140 ~~~~~~~~~~v~~g~--~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~t-D-E~~f~~~~~~~~~~~~i~V 215 (235)
T PF02358_consen 140 EILASHPGLEVVPGK--KVVEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRT-D-EDAFRALRELEEGGFGIKV 215 (235)
T ss_dssp HHHHHH-T-EEEE-S--SEEEEE-TT--HHHHHHHHHTTS---------EEEEESSHH-H-HHHHHTTTTS----EEEEE
T ss_pred HHHHhCCCEEEEECC--CEEEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCC-C-HHHHHHHHhcccCCCCeEE
Confidence 32 1234444333 39999999999999999999988764 1234555699999 9 9999963 568888
Q ss_pred c
Q 001705 972 R 972 (1024)
Q Consensus 972 g 972 (1024)
+
T Consensus 216 ~ 216 (235)
T PF02358_consen 216 G 216 (235)
T ss_dssp S
T ss_pred E
Confidence 8
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.5e-13 Score=155.40 Aligned_cols=326 Identities=18% Similarity=0.244 Sum_probs=179.3
Q ss_pred cceEEEEcCCChHHHHHHHHccC-CCCEEEEeCCCchhhhHHHHhcCC-CCc--------chhhHHHHHHHHHHHHHhhh
Q 001705 304 WPYVIHGHYADAGEVAAHLSGAL-NVPMVLTGHSLGRNKFEQLLKQGR-LPK--------DINASYKIMRRIEAEELGLD 373 (1024)
Q Consensus 304 ~pDvIh~h~~~~~~~a~~l~~~~-~ipiV~t~H~l~~~~~~~l~~~g~-~~~--------~i~~~y~~~r~i~~e~~~l~ 373 (1024)
..-+.|+|-|++|....++++.. .+..|||.|..-... .+...+. +.. .....+.+..+.-.|+.+..
T Consensus 143 ~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR--~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~ 220 (633)
T PF05693_consen 143 PKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGR--YLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAH 220 (633)
T ss_dssp EEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHH--HHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHH
T ss_pred CcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhh--HhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHH
Confidence 45688999999988888877654 788999999862111 1111110 000 11122334455556888899
Q ss_pred cCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCc
Q 001705 374 ASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGND 453 (1024)
Q Consensus 374 ~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~ 453 (1024)
.||.+.++|+-...+...+.+.- .=.|+|||++...|.... +.+.+-.
T Consensus 221 ~AdvFTTVSeITa~Ea~~LL~r~------------------------pDvV~pNGl~v~~~~~~~------efqnl~~-- 268 (633)
T PF05693_consen 221 YADVFTTVSEITAKEAEHLLKRK------------------------PDVVTPNGLNVDKFPALH------EFQNLHA-- 268 (633)
T ss_dssp HSSEEEESSHHHHHHHHHHHSS--------------------------SEE----B-GGGTSSTT------HHHHHHH--
T ss_pred hcCeeeehhhhHHHHHHHHhCCC------------------------CCEEcCCCccccccccch------HHHHHHH--
Confidence 99999999866555543333220 237899999988774332 1111000
Q ss_pred cccccCCCCcchHHHhhhh-C----CCC-CcEEEEEeCCCC-CCCHHHHHHHHhhccccC--CCCc--EE-EEE------
Q 001705 454 RTQSKRNLPPMWSEVMRFF-T----NPH-KPTILALSRPDP-KKNVTTLLKAFGECQPLR--ELAN--MT-LIL------ 515 (1024)
Q Consensus 454 ~~~~~~~~p~~~~~~~~~~-~----~~~-~~~Il~vgRld~-~Kgi~~ll~A~~~l~~l~--~~~~--l~-LIv------ 515 (1024)
.....+...++..+ . .++ ..+|...||... .||++.+|+|+.++...- ...+ ++ +|+
T Consensus 269 -----~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~ 343 (633)
T PF05693_consen 269 -----KAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTN 343 (633)
T ss_dssp -----HHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEE
T ss_pred -----HHHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccC
Confidence 00112222333221 1 233 345667889986 599999999999885321 1112 22 333
Q ss_pred -------------------------------------ecCCCcccccccchHH--------------------------H
Q 001705 516 -------------------------------------GNRDDIEDMSNSSSVV--------------------------L 532 (1024)
Q Consensus 516 -------------------------------------G~~~~~~~l~~~~~~~--------------------------~ 532 (1024)
|.-++.+++-.....+ -
T Consensus 344 ~~~ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~ 423 (633)
T PF05693_consen 344 SFNVESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSN 423 (633)
T ss_dssp EE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT
T ss_pred CcCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCcc
Confidence 2222222211100000 1
Q ss_pred HHHHHHHHHcCCCC------CEEe-CCCCCCC------CHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEc
Q 001705 533 TTVLKLIDKYDLYG------QVAY-PKHHKQS------DVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVAT 599 (1024)
Q Consensus 533 ~~i~~~i~~~~l~~------~V~~-~g~~~~~------el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat 599 (1024)
..|...+.++++.+ +|.| +-+++.. +..++.+.| |+.|+||.+||||.|.+|+.|+|+|.|.|
T Consensus 424 DpILn~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~Gc----dLgvFPSYYEPWGYTPlE~~a~gVPsITT 499 (633)
T PF05693_consen 424 DPILNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGC----DLGVFPSYYEPWGYTPLECTAFGVPSITT 499 (633)
T ss_dssp -HHHHHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHS----SEEEE--SSBSS-HHHHHHHHTT--EEEE
T ss_pred CHHHHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccC----ceeeeccccccccCChHHHhhcCCceeec
Confidence 22333334444422 2344 3344433 578899999 99999999999999999999999999999
Q ss_pred CCCCchhhhcc-----CCcEEEe-C--CCCHH----HHHHHHHHHHh-CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 001705 600 KNGGPVDILKA-----LNNGLLV-D--PHDQN----AIADALLKLLA-DKNMWSECRKNGLKNIHRFSWPEHCRNYLSHV 666 (1024)
Q Consensus 600 ~~Gg~~eii~~-----~~~Gllv-~--p~d~~----~la~aI~~ll~-d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~ 666 (1024)
+..|...++.. ...|+.| + -.+.+ ++++.|.+... ++..+..+++++.+.....+|......|.+.+
T Consensus 500 nLsGFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay 579 (633)
T PF05693_consen 500 NLSGFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAY 579 (633)
T ss_dssp TTBHHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHH
T ss_pred cchhHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 99888776653 2357765 2 22444 45555555554 45566777777776668999999999999999
Q ss_pred HHhhhc
Q 001705 667 EHSRNR 672 (1024)
Q Consensus 667 ~~~~~~ 672 (1024)
.-.+.+
T Consensus 580 ~~AL~~ 585 (633)
T PF05693_consen 580 DLALRR 585 (633)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 876654
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.2e-13 Score=133.75 Aligned_cols=131 Identities=31% Similarity=0.456 Sum_probs=93.8
Q ss_pred CcEEEEEeCCCCCCCHHHHHH-HHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCC
Q 001705 477 KPTILALSRPDPKKNVTTLLK-AFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHH 554 (1024)
Q Consensus 477 ~~~Il~vgRld~~Kgi~~ll~-A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~ 554 (1024)
.++|+++|++.+.|+++.+++ ++.++.+ ..|++.| |+|.+++ ++ .++ ..++|.|+|++
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~--~~p~~~l~i~G~~~~--~l-----------~~~-----~~~~v~~~g~~ 61 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKE--KHPDIELIIIGNGPD--EL-----------KRL-----RRPNVRFHGFV 61 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHH--HSTTEEEEEECESS---HH-----------CCH-----HHCTEEEE-S-
T ss_pred cccccccccccccccccchhhhHHHHHHH--HCcCEEEEEEeCCHH--HH-----------HHh-----cCCCEEEcCCH
Confidence 468999999999999999999 9999853 4477777 7788653 11 122 23589999998
Q ss_pred CCCCHHHHHHHhhcCCcEEEecCC-CCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHH
Q 001705 555 KQSDVPDIYRLAAKTKGVFINPAL-VEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLL 633 (1024)
Q Consensus 555 ~~~el~~ly~~A~~~~dv~v~ps~-~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll 633 (1024)
+++.++|+.| |++++|+. .++++.+++|||++|+|||+++. +..+++.....|+++ ++|+++++++|.+++
T Consensus 62 --~e~~~~l~~~----dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 62 --EELPEILAAA----DVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp --HHHHHHHHC-----SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred --HHHHHHHHhC----CEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 5899999999 99999985 67899999999999999999999 567777666778888 889999999999998
Q ss_pred hC
Q 001705 634 AD 635 (1024)
Q Consensus 634 ~d 635 (1024)
+|
T Consensus 134 ~d 135 (135)
T PF13692_consen 134 ND 135 (135)
T ss_dssp H-
T ss_pred cC
Confidence 75
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.7e-11 Score=123.79 Aligned_cols=245 Identities=16% Similarity=0.185 Sum_probs=150.7
Q ss_pred cceeEEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceE
Q 001705 746 RQMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSEL 825 (1024)
Q Consensus 746 ~~rlllIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I 825 (1024)
++...||++|+||||+++ ..-.+....++.+|++. |+.|++||..+..++..+-+.++++ +-.+|+.||+.|
T Consensus 4 ~~~~~lIFtDlD~TLl~~-~ye~~pA~pv~~el~d~----G~~Vi~~SSKT~aE~~~l~~~l~v~---~~p~iaEnG~aI 75 (274)
T COG3769 4 IQMPLLIFTDLDGTLLPH-SYEWQPAAPVLLELKDA----GVPVILCSSKTRAEMLYLQKSLGVQ---GLPLIAENGAAI 75 (274)
T ss_pred cccceEEEEcccCcccCC-CCCCCccchHHHHHHHc----CCeEEEeccchHHHHHHHHHhcCCC---CCceeecCCceE
Confidence 455678889999998774 23334556778888887 9999999999999999999999986 346999999999
Q ss_pred EcCCCccccCcchh-----hhhcccCCchhHHHHHhhhhhccC-----CCCccccccc----------CCCCceEEEEEe
Q 001705 826 YFPWRDMVADGDYE-----AHVEYRWPGENVRSVVPRVARAED-----GAEDDIVGFV----------DASSSRCQSYSI 885 (1024)
Q Consensus 826 ~~~~~~~~~d~~~~-----~~i~~~w~~~~v~~~l~~~~~~~~-----~~~~~~~~~~----------~~~~~~k~~~~~ 885 (1024)
|-+.+-+..+.... .+++-.-.-+.++..+..+...+. ..+...++.. .....|......
T Consensus 76 ~~p~~~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rEyseti~~ 155 (274)
T COG3769 76 YLPKGWFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLREYSETIIW 155 (274)
T ss_pred EecccccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHHhhhheee
Confidence 98733221111111 111111122334444433332210 0000000000 001112222221
Q ss_pred cCCCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHh-CCCCCC-EEEEeCCCCCCChHHhhc
Q 001705 886 KPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRW-GIDLSK-MVVFVGEKGDTDYEDLLV 963 (1024)
Q Consensus 886 ~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~-gi~~~~-vvafiGDs~N~D~~~Ml~ 963 (1024)
.+.+ ....++...|+..++ .+.++..|--|+.....||+|+..+++.+ ..+..+ +++ +||+.| | .+||+
T Consensus 156 rs~d--~~~~~~~~~L~e~gl----t~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~~r~t~~-~GDg~n-D-~Pl~e 226 (274)
T COG3769 156 RSSD--ERMAQFTARLNERGL----TFVHGARFWHVLDASAGKGQAANWLLETYRRLGGARTTLG-LGDGPN-D-APLLE 226 (274)
T ss_pred cccc--hHHHHHHHHHHhcCc----eEEeccceEEEeccccCccHHHHHHHHHHHhcCceeEEEe-cCCCCC-c-ccHHH
Confidence 2111 134456667776543 44555558889999999999999999765 345555 556 699999 9 99999
Q ss_pred CCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHHhc
Q 001705 964 GLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAI 1021 (1024)
Q Consensus 964 ~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~ 1021 (1024)
...+.+.++|.. -+-.+..+ +-|-+..+++.-..+|..+.++++
T Consensus 227 v~d~AfiV~~ln----re~~~lv~----------~i~~vv~~~~~~~~~~~~e~~~~~ 270 (274)
T COG3769 227 VMDYAFIVKGLN----REGVHLVS----------SIPAVVERIQREGPEGWREGLDHF 270 (274)
T ss_pred hhhhheeecccc----hhhhhccc----------cchhheeeccccCchHHHHHhhhh
Confidence 999999999433 22222222 224455666777788998888876
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.1e-10 Score=135.53 Aligned_cols=250 Identities=16% Similarity=0.029 Sum_probs=146.9
Q ss_pred CcceEEEEcCCCh-HHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeC
Q 001705 303 TWPYVIHGHYADA-GEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTS 381 (1024)
Q Consensus 303 ~~pDvIh~h~~~~-~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~ 381 (1024)
.+||+|+++++.. ....+..++.+|+|+++.+. - . ++...+ .+ -+.+.+.+|.|++.
T Consensus 88 ~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~-P--~---~waw~~-------------~~---~r~l~~~~d~v~~~ 145 (385)
T TIGR00215 88 AKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYIS-P--Q---VWAWRK-------------WR---AKKIEKATDFLLAI 145 (385)
T ss_pred cCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeC-C--c---HhhcCc-------------ch---HHHHHHHHhHhhcc
Confidence 6899999998622 22233356677999997653 1 0 000000 00 12245688999999
Q ss_pred CHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCC
Q 001705 382 TRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNL 461 (1024)
Q Consensus 382 S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1024)
++.+.+.+.. .|+ +..++.|++-.... +..
T Consensus 146 ~~~e~~~~~~------------------~g~--------~~~~vGnPv~~~~~-~~~----------------------- 175 (385)
T TIGR00215 146 LPFEKAFYQK------------------KNV--------PCRFVGHPLLDAIP-LYK----------------------- 175 (385)
T ss_pred CCCcHHHHHh------------------cCC--------CEEEECCchhhhcc-ccC-----------------------
Confidence 8876554211 011 55667666522111 000
Q ss_pred CcchHHHhhhhCCCCCcEEEEE--eCCCC-CCCHHHHHHHHhhccccCCCCcEEE-E-EecCCCcccccccchHHHHHHH
Q 001705 462 PPMWSEVMRFFTNPHKPTILAL--SRPDP-KKNVTTLLKAFGECQPLRELANMTL-I-LGNRDDIEDMSNSSSVVLTTVL 536 (1024)
Q Consensus 462 p~~~~~~~~~~~~~~~~~Il~v--gRld~-~Kgi~~ll~A~~~l~~l~~~~~l~L-I-vG~~~~~~~l~~~~~~~~~~i~ 536 (1024)
+.....+.++..++++++|+.+ +|..+ .|++..+++|+..+. +..|++.+ + ++.+.. ...+.
T Consensus 176 ~~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~--~~~p~~~~vi~~~~~~~-----------~~~~~ 242 (385)
T TIGR00215 176 PDRKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLE--QQEPDLRRVLPVVNFKR-----------RLQFE 242 (385)
T ss_pred CCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHH--HhCCCeEEEEEeCCchh-----------HHHHH
Confidence 0011123344455677877765 37766 789999999999885 34466654 3 333221 12334
Q ss_pred HHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcC-CCCchh---------
Q 001705 537 KLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATK-NGGPVD--------- 606 (1024)
Q Consensus 537 ~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~-~Gg~~e--------- 606 (1024)
+....++....|.++.. +...+|++| |++|.+| |.+.+|+|++|+|+|... .....-
T Consensus 243 ~~~~~~~~~~~v~~~~~----~~~~~l~aA----Dl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~ 309 (385)
T TIGR00215 243 QIKAEYGPDLQLHLIDG----DARKAMFAA----DAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKT 309 (385)
T ss_pred HHHHHhCCCCcEEEECc----hHHHHHHhC----CEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcC
Confidence 44455555445655433 567899999 9999999 777789999999998872 222221
Q ss_pred -------hhccCCcE--EEeCCCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHH
Q 001705 607 -------ILKALNNG--LLVDPHDQNAIADALLKLLADK----NMWSECRKNGLKNI 650 (1024)
Q Consensus 607 -------ii~~~~~G--llv~p~d~~~la~aI~~ll~d~----~~~~~~~~~~~~~~ 650 (1024)
++.+..-. ++=+.-+++.+++++.+++.|+ +.++++.+...+..
T Consensus 310 ~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 366 (385)
T TIGR00215 310 DYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENGLKAYKEMHRERQFFEELR 366 (385)
T ss_pred CeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHH
Confidence 12111111 1112346899999999999999 87777766655543
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.2e-11 Score=121.78 Aligned_cols=160 Identities=28% Similarity=0.366 Sum_probs=88.1
Q ss_pred ChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCCeEEEEecCCCCCCccccccCCcc
Q 001705 195 GGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWPY 274 (1024)
Q Consensus 195 GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~lwp~ 274 (1024)
||+++++.+|+++|++.| |+|+|+|+...... .+ ....++.++++|..+... .+..
T Consensus 1 GG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~~--------~~--------~~~~~~~~~~~~~~~~~~------~~~~ 56 (160)
T PF13579_consen 1 GGIERYVRELARALAARG--HEVTVVTPQPDPED--------DE--------EEEDGVRVHRLPLPRRPW------PLRL 56 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT---EEEEEEE---GGG---------S--------EEETTEEEEEE--S-SSS------GGGH
T ss_pred CCHHHHHHHHHHHHHHCC--CEEEEEecCCCCcc--------cc--------cccCCceEEeccCCccch------hhhh
Confidence 899999999999999999 99999997643221 01 123489999999755421 1111
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcc
Q 001705 275 IHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKD 354 (1024)
Q Consensus 275 ~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~ 354 (1024)
+ .+.. .+.+.+. .. ..+||+||+|++..+.++.++++..++|+|++.|+..... +
T Consensus 57 ~-~~~~-------~~~~~l~--~~---~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~-------~----- 111 (160)
T PF13579_consen 57 L-RFLR-------RLRRLLA--AR---RERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRR-------G----- 111 (160)
T ss_dssp C-CHHH-------HHHHHCH--HC---T---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------------
T ss_pred H-HHHH-------HHHHHHh--hh---ccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhh-------c-----
Confidence 1 1111 1111110 01 2579999999987777777777567999999999753221 0
Q ss_pred hhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCC
Q 001705 355 INASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPG 428 (1024)
Q Consensus 355 i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnG 428 (1024)
......+++.+ ++..++.||.|+++|+...+.+.. +. . +..++.|||||
T Consensus 112 ~~~~~~~~~~~--~~~~~~~ad~vi~~S~~~~~~l~~-~g-~---------------------~~~ri~vipnG 160 (160)
T PF13579_consen 112 SRWKRRLYRWL--ERRLLRRADRVIVVSEAMRRYLRR-YG-V---------------------PPDRIHVIPNG 160 (160)
T ss_dssp --HHHHHHHHH--HHHHHHH-SEEEESSHHHHHHHHH-H-------------------------GGGEEE----
T ss_pred cchhhHHHHHH--HHHHHhcCCEEEECCHHHHHHHHH-hC-C---------------------CCCcEEEeCcC
Confidence 01112233333 678899999999999988887655 32 2 22399999998
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.9e-11 Score=110.72 Aligned_cols=91 Identities=22% Similarity=0.387 Sum_probs=86.0
Q ss_pred EEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-
Q 001705 572 VFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNI- 650 (1024)
Q Consensus 572 v~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~- 650 (1024)
++++|+..++++..++|+||||+|||++..++..+++.++..+++++ |++++.++|..++++|++++++++++++.+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~~~~~~~ia~~a~~~v~ 78 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLENPEERRRIAKNARERVL 78 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999999888999998 999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHH
Q 001705 651 HRFSWPEHCRNYLS 664 (1024)
Q Consensus 651 ~~fsw~~~a~~~l~ 664 (1024)
++|+|++.++++++
T Consensus 79 ~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 79 KRHTWEHRAEQILE 92 (92)
T ss_pred HhCCHHHHHHHHHC
Confidence 59999999998863
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.25 E-value=9.4e-09 Score=117.93 Aligned_cols=308 Identities=11% Similarity=0.097 Sum_probs=172.9
Q ss_pred CChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCCeEEEEecCCCCCCccccccCCc
Q 001705 194 TGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWP 273 (1024)
Q Consensus 194 ~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~lwp 273 (1024)
|||+..-.+.++++|.+.| |+|.++++... ...+.+. ..|+.++.++..+. ++...|.
T Consensus 11 TGGHi~Pala~a~~l~~~g--~~v~~vg~~~~---------~e~~l~~-------~~g~~~~~~~~~~l----~~~~~~~ 68 (352)
T PRK12446 11 SAGHVTPNLAIIPYLKEDN--WDISYIGSHQG---------IEKTIIE-------KENIPYYSISSGKL----RRYFDLK 68 (352)
T ss_pred cHHHHHHHHHHHHHHHhCC--CEEEEEECCCc---------cccccCc-------ccCCcEEEEeccCc----CCCchHH
Confidence 8999999999999999998 99999987531 1111111 12566666664322 1111111
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCc
Q 001705 274 YIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPK 353 (1024)
Q Consensus 274 ~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~ 353 (1024)
.+. +.........+..+.+.+ .+||+||++....+..+.+.++.+++|++++-.+..+
T Consensus 69 ~~~-~~~~~~~~~~~~~~i~~~-------~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~-------------- 126 (352)
T PRK12446 69 NIK-DPFLVMKGVMDAYVRIRK-------LKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTP-------------- 126 (352)
T ss_pred HHH-HHHHHHHHHHHHHHHHHh-------cCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCc--------------
Confidence 111 111112222222233333 6899999988767777778888889998775543211
Q ss_pred chhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCC
Q 001705 354 DINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSY 433 (1024)
Q Consensus 354 ~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~ 433 (1024)
. ... +...+.|+.|+++-+...+. |.. .++.+.-|.|..+.
T Consensus 127 --g----~~n-----r~~~~~a~~v~~~f~~~~~~-------~~~---------------------~k~~~tG~Pvr~~~ 167 (352)
T PRK12446 127 --G----LAN-----KIALRFASKIFVTFEEAAKH-------LPK---------------------EKVIYTGSPVREEV 167 (352)
T ss_pred --c----HHH-----HHHHHhhCEEEEEccchhhh-------CCC---------------------CCeEEECCcCCccc
Confidence 0 111 12456778887754321111 111 16666666554432
Q ss_pred ccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHH-HHHHhhccccCCCCcEE
Q 001705 434 VTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTL-LKAFGECQPLRELANMT 512 (1024)
Q Consensus 434 f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~l-l~A~~~l~~l~~~~~l~ 512 (1024)
..... ......+...+++++||.+|.=-..+.+..+ .+++..+. ..-+++
T Consensus 168 ~~~~~--------------------------~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~---~~~~vv 218 (352)
T PRK12446 168 LKGNR--------------------------EKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELL---LKYQIV 218 (352)
T ss_pred ccccc--------------------------hHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhc---cCcEEE
Confidence 21100 1112233345678888888765445556433 34444442 123343
Q ss_pred EEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc
Q 001705 513 LILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAY 592 (1024)
Q Consensus 513 LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~ 592 (1024)
.+.|..+ .++ .. ..+ ..+...++. .++++++|+.| |++|.- +-+.++.|++++
T Consensus 219 ~~~G~~~-~~~-----------~~---~~~---~~~~~~~f~-~~~m~~~~~~a----dlvIsr----~G~~t~~E~~~~ 271 (352)
T PRK12446 219 HLCGKGN-LDD-----------SL---QNK---EGYRQFEYV-HGELPDILAIT----DFVISR----AGSNAIFEFLTL 271 (352)
T ss_pred EEeCCch-HHH-----------HH---hhc---CCcEEecch-hhhHHHHHHhC----CEEEEC----CChhHHHHHHHc
Confidence 4556432 111 11 111 122333442 25799999999 898864 347899999999
Q ss_pred CCcEEEcCCC-----Cc----hhhhccCCcEEEeCCC--CHHHHHHHHHHHHhCHHHHH
Q 001705 593 GLPVVATKNG-----GP----VDILKALNNGLLVDPH--DQNAIADALLKLLADKNMWS 640 (1024)
Q Consensus 593 G~PVVat~~G-----g~----~eii~~~~~Gllv~p~--d~~~la~aI~~ll~d~~~~~ 640 (1024)
|+|+|.-... +- .+.+.....|..+... +++.++++|.+++.|++.++
T Consensus 272 g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~~~~ 330 (352)
T PRK12446 272 QKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNNEKYK 330 (352)
T ss_pred CCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCHHHHH
Confidence 9999988542 11 2234444556666433 57899999999999986543
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.3e-11 Score=123.92 Aligned_cols=168 Identities=21% Similarity=0.272 Sum_probs=85.5
Q ss_pred CCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCCeEEEEecCCCCCCccccccC
Q 001705 192 SDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESL 271 (1024)
Q Consensus 192 ~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~l 271 (1024)
+..||.++++.+|+++|+++| |+|++++....++... . ........+....
T Consensus 9 ~~~GG~e~~~~~l~~~l~~~G--~~v~v~~~~~~~~~~~-----------------~-~~~~~~~~~~~~~--------- 59 (177)
T PF13439_consen 9 PNIGGAERVVLNLARALAKRG--HEVTVVSPGVKDPIEE-----------------E-LVKIFVKIPYPIR--------- 59 (177)
T ss_dssp TSSSHHHHHHHHHHHHHHHTT---EEEEEESS-TTS-SS-----------------T-EEEE---TT-SST---------
T ss_pred CCCChHHHHHHHHHHHHHHCC--CEEEEEEcCCCccchh-----------------h-ccceeeeeecccc---------
Confidence 468999999999999999999 9999998875432210 0 0111111111110
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCC
Q 001705 272 WPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRL 351 (1024)
Q Consensus 272 wp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~ 351 (1024)
......+ .....+.+.+.+ .+||+||+|.+.....+..... ++|++++.|+.... .. ......
T Consensus 60 ~~~~~~~-----~~~~~~~~~i~~-------~~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~--~~-~~~~~~ 122 (177)
T PF13439_consen 60 KRFLRSF-----FFMRRLRRLIKK-------EKPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFE--RR-FLKSKL 122 (177)
T ss_dssp SS--HHH-----HHHHHHHHHHHH-------HT-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH----HH-TTTTSC
T ss_pred cccchhH-----HHHHHHHHHHHH-------cCCCeEEecccchhHHHHHhcc--CCCEEEEeCCCccc--cc-cccccc
Confidence 0011111 112223333333 3699999998743333332222 89999999975421 00 001111
Q ss_pred CcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCC
Q 001705 352 PKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDF 431 (1024)
Q Consensus 352 ~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~ 431 (1024)
. .. . .+...+ +....+.+|.++|+|+...+++.. +. + +..++.|||||||.
T Consensus 123 ~-~~-~--~~~~~~--~~~~~~~~~~ii~vS~~~~~~l~~-~~-~---------------------~~~ki~vI~ngid~ 173 (177)
T PF13439_consen 123 S-PY-S--YLNFRI--ERKLYKKADRIIAVSESTKDELIK-FG-I---------------------PPEKIHVIYNGIDT 173 (177)
T ss_dssp C-CH-H--HHHHCT--THHHHCCSSEEEESSHHHHHHHHH-HT------------------------SS-EEE----B-C
T ss_pred c-hh-h--hhhhhh--hhhHHhcCCEEEEECHHHHHHHHH-hC-C---------------------cccCCEEEECCccH
Confidence 1 11 1 111111 344578999999999988887655 32 1 22389999999999
Q ss_pred CCc
Q 001705 432 SYV 434 (1024)
Q Consensus 432 ~~f 434 (1024)
+.|
T Consensus 174 ~~F 176 (177)
T PF13439_consen 174 DRF 176 (177)
T ss_dssp CCH
T ss_pred HHc
Confidence 987
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.8e-08 Score=114.63 Aligned_cols=327 Identities=17% Similarity=0.166 Sum_probs=193.8
Q ss_pred CChHHHHHHHHHHHHHcCCCceE-EEEEecCCCCCCCCcccCCCccccCCCCCCCCCCCeEEEEecCCCCCCccccccCC
Q 001705 194 TGGQVKYVVELARALANTEGVYR-VDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLW 272 (1024)
Q Consensus 194 ~GG~~~~v~~La~aLa~~g~v~~-V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~lw 272 (1024)
|||+..-..-|+++|.++| ++ |.++.... ...+.+ ....++.++-++.++...+. .|
T Consensus 10 TGGHv~pAlAl~~~l~~~g--~~~v~~~~~~~----------~~e~~l------~~~~~~~~~~I~~~~~~~~~----~~ 67 (357)
T COG0707 10 TGGHVFPALALAEELAKRG--WEQVIVLGTGD----------GLEAFL------VKQYGIEFELIPSGGLRRKG----SL 67 (357)
T ss_pred CccchhHHHHHHHHHHhhC--ccEEEEecccc----------cceeee------ccccCceEEEEecccccccC----cH
Confidence 8999999999999999999 74 55552221 011111 11237888888876543322 22
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCC
Q 001705 273 PYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLP 352 (1024)
Q Consensus 273 p~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~ 352 (1024)
..+... -..+.-..+..+.+.+ .+||+|.+........+.+.+..+++|++.+-.+.-..
T Consensus 68 ~~~~~~-~~~~~~~~~a~~il~~-------~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~G------------ 127 (357)
T COG0707 68 KLLKAP-FKLLKGVLQARKILKK-------LKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVPG------------ 127 (357)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHH-------cCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCcc------------
Confidence 211111 1222233344444544 68999999777666677777788899999888765221
Q ss_pred cchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCC
Q 001705 353 KDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFS 432 (1024)
Q Consensus 353 ~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~ 432 (1024)
...++ ..+.|+.|.+.-.. ... + +. ..++.+.-+.|..+
T Consensus 128 ----~ank~---------~~~~a~~V~~~f~~-~~~----~--~~---------------------~~~~~~tG~Pvr~~ 166 (357)
T COG0707 128 ----LANKI---------LSKFAKKVASAFPK-LEA----G--VK---------------------PENVVVTGIPVRPE 166 (357)
T ss_pred ----hhHHH---------hHHhhceeeecccc-ccc----c--CC---------------------CCceEEecCcccHH
Confidence 11111 23456666554332 110 0 11 11466666666554
Q ss_pred CccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHh-hccccCCCCcE
Q 001705 433 YVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFG-ECQPLRELANM 511 (1024)
Q Consensus 433 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~-~l~~l~~~~~l 511 (1024)
.+. ... ...++....++++|+.+|.=-..+.+..++.... .+ .+ ++
T Consensus 167 ~~~-~~~---------------------------~~~~~~~~~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l---~~--~~ 213 (357)
T COG0707 167 FEE-LPA---------------------------AEVRKDGRLDKKTILVTGGSQGAKALNDLVPEALAKL---AN--RI 213 (357)
T ss_pred hhc-cch---------------------------hhhhhhccCCCcEEEEECCcchhHHHHHHHHHHHHHh---hh--Ce
Confidence 432 110 0011111236888888887443333444443333 33 22 34
Q ss_pred EE--EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHH
Q 001705 512 TL--ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEA 589 (1024)
Q Consensus 512 ~L--IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEA 589 (1024)
.+ +.|... +.++.....+++. +...++ .++++++|+.| |++|.=+ -++|+-|.
T Consensus 214 ~v~~~~G~~~------------~~~~~~~~~~~~~---~~v~~f--~~dm~~~~~~A----DLvIsRa----Ga~Ti~E~ 268 (357)
T COG0707 214 QVIHQTGKND------------LEELKSAYNELGV---VRVLPF--IDDMAALLAAA----DLVISRA----GALTIAEL 268 (357)
T ss_pred EEEEEcCcch------------HHHHHHHHhhcCc---EEEeeH--HhhHHHHHHhc----cEEEeCC----cccHHHHH
Confidence 44 334322 3444455555554 666777 56899999999 8988643 47999999
Q ss_pred HHcCCcEEEcCCCCc--------hhhhccCCcEEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHH
Q 001705 590 AAYGLPVVATKNGGP--------VDILKALNNGLLVDPHD--QNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHC 659 (1024)
Q Consensus 590 mA~G~PVVat~~Gg~--------~eii~~~~~Gllv~p~d--~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a 659 (1024)
.++|+|+|.-..+.. ...+.+...|++++-.+ ++.+++.|.+++++|+..++|..++++....-.-..++
T Consensus 269 ~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~~m~~~a~~~~~p~aa~~i~ 348 (357)
T COG0707 269 LALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENAKKLGKPDAAERIA 348 (357)
T ss_pred HHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 999999998764433 22344455678886555 88999999999999999999998888765443334343
Q ss_pred HH
Q 001705 660 RN 661 (1024)
Q Consensus 660 ~~ 661 (1024)
..
T Consensus 349 ~~ 350 (357)
T COG0707 349 DL 350 (357)
T ss_pred HH
Confidence 33
|
|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=99.16 E-value=4.1e-11 Score=130.26 Aligned_cols=206 Identities=20% Similarity=0.152 Sum_probs=108.4
Q ss_pred EEEEEecccccccCCCCCCCC-CCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCC-----
Q 001705 171 YIVLISMHGLVRGDNMEIGRD-SDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPS----- 244 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~-~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~----- 244 (1024)
||+||+++ ++ | ..+||....+..|+++|+++| |+|.|+++..........-..++..+....
T Consensus 1 kIl~vt~E---------~~-P~~k~GGLgdv~~~L~kaL~~~G--~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~ 68 (245)
T PF08323_consen 1 KILMVTSE---------YA-PFAKVGGLGDVVGSLPKALAKQG--HDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVP 68 (245)
T ss_dssp EEEEE-S----------BT-TTB-SSHHHHHHHHHHHHHHHTT---EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEE
T ss_pred CEEEEEcc---------cC-cccccCcHhHHHHHHHHHHHhcC--CeEEEEEccchhhhhhhhcceEEEEeccccccccc
Confidence 79999988 43 3 589999999999999999999 999999997632110000000000000000
Q ss_pred ----C-----CCCCCCeEEEEecCCCCCCccccccCCcc-hHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC
Q 001705 245 ----D-----GTGSCGAYIIRIPCGARDKYIAKESLWPY-IHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYAD 314 (1024)
Q Consensus 245 ----~-----~~~~~gv~i~rip~~~~~~~~~k~~lwp~-~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~ 314 (1024)
. ....+|+.++.+... .++.+..+... -..+.+...+.. .+++++.+.+..- +.+|||||+|+|+
T Consensus 69 ~~~~~~~~v~~~~~~~v~v~~i~~~---~~f~r~~iY~~~~~~~~d~~~rf~-~fs~a~le~~~~l-~~~pDIIH~hDW~ 143 (245)
T PF08323_consen 69 VGVWYEVRVYRYPVDGVPVYFIDNP---EYFDRPGIYGDNGGDYPDNAERFA-FFSRAALELLKKL-GWKPDIIHCHDWH 143 (245)
T ss_dssp EE----EEEEEEEETTEEEEEEESH---HHHGSSSSSBSTSSBHTTHHHHHH-HHHHHHHHHHCTC-T-S-SEEEEECGG
T ss_pred cccceEEEEEEEEcCCccEEEecCh---hhccccceeccCCCcchhHHHHHH-HHHHHHHHHHHhh-CCCCCEEEecCch
Confidence 0 011247777766532 23333333311 001112222221 3344444545441 3589999999999
Q ss_pred hHHHHHHHHccC-------CCCEEEEeCCCchhhh---HHHHhcCCCCcc--hhhHHHHHHHHHHHHHhhhcCCEEEeCC
Q 001705 315 AGEVAAHLSGAL-------NVPMVLTGHSLGRNKF---EQLLKQGRLPKD--INASYKIMRRIEAEELGLDASEMVVTST 382 (1024)
Q Consensus 315 ~~~~a~~l~~~~-------~ipiV~t~H~l~~~~~---~~l~~~g~~~~~--i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S 382 (1024)
+++++.+++... ++|+|+|+|++..... ..+...|..... ....+.....+...+..+..||.|+|+|
T Consensus 144 tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi~~AD~v~TVS 223 (245)
T PF08323_consen 144 TALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGIVYADKVTTVS 223 (245)
T ss_dssp GTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHHHHSSEEEESS
T ss_pred HHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHHHhcCEeeeCC
Confidence 999999999875 5999999999733211 011001110000 0000000112223456788999999999
Q ss_pred HHHHHHHHhcc
Q 001705 383 RQEIEMQWGLY 393 (1024)
Q Consensus 383 ~~~~~~~~~~~ 393 (1024)
+.+++++..-+
T Consensus 224 ~~Ya~Ei~~~~ 234 (245)
T PF08323_consen 224 PTYAREIQTPE 234 (245)
T ss_dssp HHHHHHTTSHH
T ss_pred HHHHHHHhCcc
Confidence 99999976544
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=99.08 E-value=1e-08 Score=119.86 Aligned_cols=194 Identities=15% Similarity=0.260 Sum_probs=141.4
Q ss_pred hcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccC
Q 001705 373 DASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGN 452 (1024)
Q Consensus 373 ~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~ 452 (1024)
...|.||++|+++.+.+..+++.. .++.++|-|+=+. + +..
T Consensus 238 ~~~~~iIv~T~~q~~di~~r~~~~-----------------------~~~~~ip~g~i~~-~-~~~-------------- 278 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKELLDNE-----------------------YQEQISQLGYLYP-F-KKD-------------- 278 (438)
T ss_pred cccCeEEeCCHHHHHHHHHHhCcc-----------------------cCceEEEEEEEEe-e-ccc--------------
Confidence 688999999988777666554420 1667788776522 1 111
Q ss_pred ccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHH
Q 001705 453 DRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVL 532 (1024)
Q Consensus 453 ~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~ 532 (1024)
+...+-++.++ + ...|++++++. ...|++.|=+|.+.+ | .
T Consensus 279 ---------------------~r~~~~~l~~t---~----s~~I~~i~~Lv--~~lPd~~f~Iga~te---~-------s 318 (438)
T TIGR02919 279 ---------------------NKYRKQALILT---N----SDQIEHLEEIV--QALPDYHFHIAALTE---M-------S 318 (438)
T ss_pred ---------------------cCCcccEEEEC---C----HHHHHHHHHHH--HhCCCcEEEEEecCc---c-------c
Confidence 01233455555 1 88999999884 567888884476653 1 2
Q ss_pred HHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCC-CCchhhhccC
Q 001705 533 TTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKN-GGPVDILKAL 611 (1024)
Q Consensus 533 ~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~-Gg~~eii~~~ 611 (1024)
.+|.++ .++ .+.+.|+|.. ..++.++|..| |+++.++..|+|++++.||+.+|+|||+.+. -|+.+++.+
T Consensus 319 ~kL~~L-~~y--~nvvly~~~~-~~~l~~ly~~~----dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~- 389 (438)
T TIGR02919 319 SKLMSL-DKY--DNVKLYPNIT-TQKIQELYQTC----DIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS- 389 (438)
T ss_pred HHHHHH-Hhc--CCcEEECCcC-hHHHHHHHHhc----cEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC-
Confidence 455666 666 4556666664 45799999999 9999999999999999999999999999884 456677754
Q ss_pred CcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHH
Q 001705 612 NNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWP 656 (1024)
Q Consensus 612 ~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~ 656 (1024)
|.+++++|+++|+++|.++|++++.+++.-..-++.+..-+.+
T Consensus 390 --g~l~~~~~~~~m~~~i~~lL~d~~~~~~~~~~q~~~a~~~~~~ 432 (438)
T TIGR02919 390 --ENIFEHNEVDQLISKLKDLLNDPNQFRELLEQQREHANDISKE 432 (438)
T ss_pred --CceecCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccCCHH
Confidence 8999999999999999999999988887666655555444433
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.06 E-value=5.6e-10 Score=112.55 Aligned_cols=72 Identities=8% Similarity=0.131 Sum_probs=65.1
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEec
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIE 1006 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt 1006 (1024)
+|..++..+++++|+++++++++ ||+.| | ++|++.+|.+++|. |+.+.++..++ +++
T Consensus 76 ~k~~~~~~~~~~~~~~~~~~~~v-GDs~~-D-~~~~~~ag~~~~v~----~~~~~~~~~a~----------------~i~ 132 (154)
T TIGR01670 76 NKLIAFSDILEKLALAPENVAYI-GDDLI-D-WPVMEKVGLSVAVA----DAHPLLIPRAD----------------YVT 132 (154)
T ss_pred chHHHHHHHHHHcCCCHHHEEEE-CCCHH-H-HHHHHHCCCeEecC----CcCHHHHHhCC----------------EEe
Confidence 38889999999999999999996 99999 9 99999999999999 99999999898 888
Q ss_pred cccChhH-HHHHHHhc
Q 001705 1007 ESYEPQD-LSAALKAI 1021 (1024)
Q Consensus 1007 ~~~~~dg-I~~aL~~~ 1021 (1024)
.+...+| ++++++++
T Consensus 133 ~~~~~~g~~~~~~~~~ 148 (154)
T TIGR01670 133 RIAGGRGAVREVCELL 148 (154)
T ss_pred cCCCCCcHHHHHHHHH
Confidence 8887666 99998875
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.02 E-value=6.5e-10 Score=113.18 Aligned_cols=69 Identities=6% Similarity=0.084 Sum_probs=61.7
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEec
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIE 1006 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt 1006 (1024)
.|...++.+++++|++++++++| ||+.| | ++|++.+|+++||+ ||.++++..|+ +|+
T Consensus 82 pkp~~~~~~~~~l~~~~~ev~~i-GD~~n-D-i~~~~~ag~~~am~----nA~~~lk~~A~----------------~I~ 138 (169)
T TIGR02726 82 KKTEPYAQMLEEMNISDAEVCYV-GDDLV-D-LSMMKRVGLAVAVG----DAVADVKEAAA----------------YVT 138 (169)
T ss_pred CCHHHHHHHHHHcCcCHHHEEEE-CCCHH-H-HHHHHHCCCeEECc----CchHHHHHhCC----------------EEc
Confidence 35678899999999999999997 99999 9 99999999999999 99999999999 898
Q ss_pred cccChhHHHHHH
Q 001705 1007 ESYEPQDLSAAL 1018 (1024)
Q Consensus 1007 ~~~~~dgI~~aL 1018 (1024)
..+..+|+...+
T Consensus 139 ~~~~~~g~v~e~ 150 (169)
T TIGR02726 139 TARGGHGAVREV 150 (169)
T ss_pred CCCCCCCHHHHH
Confidence 888888864444
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=9.9e-10 Score=114.06 Aligned_cols=137 Identities=12% Similarity=0.105 Sum_probs=107.2
Q ss_pred eeEEEEEecCCCCCCC-------chhhHHHHH---HHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEE
Q 001705 748 MLIVIAADCYDSDGNT-------TETFQATIK---NVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAI 817 (1024)
Q Consensus 748 rlllIa~DlDGTl~~~-------~~~i~~~~~---~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~l 817 (1024)
.+.+|++|+||||+++ +..+...+. .+++.++++ |+.++|+|||+...+..+++.+++.. +
T Consensus 20 ~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L~~~----Gi~v~I~T~~~~~~v~~~l~~lgl~~-----~ 90 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCLLTS----GIEVAIITGRKSKLVEDRMTTLGITH-----L 90 (183)
T ss_pred CceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHHHHC----CCEEEEEeCCCcHHHHHHHHHcCCce-----e
Confidence 3556679999997764 444444444 788888876 99999999999999998888866520 0
Q ss_pred EecCCceEEcCCCccccCcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHH
Q 001705 818 VCNSGSELYFPWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNI 897 (1024)
Q Consensus 818 I~~nGa~I~~~~~~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el 897 (1024)
| . .
T Consensus 91 --------------------f---------------------------------------------~-g----------- 93 (183)
T PRK09484 91 --------------------Y---------------------------------------------Q-G----------- 93 (183)
T ss_pred --------------------e---------------------------------------------c-C-----------
Confidence 0 0 0
Q ss_pred HHHHHhcCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCC
Q 001705 898 RQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMY 977 (1024)
Q Consensus 898 ~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~N 977 (1024)
.-+|..+++.+++++|+++++++++ ||+.| | ++|++.+|++++|+ +
T Consensus 94 ---------------------------~~~k~~~l~~~~~~~gl~~~ev~~V-GDs~~-D-~~~a~~aG~~~~v~----~ 139 (183)
T PRK09484 94 ---------------------------QSNKLIAFSDLLEKLAIAPEQVAYI-GDDLI-D-WPVMEKVGLSVAVA----D 139 (183)
T ss_pred ---------------------------CCcHHHHHHHHHHHhCCCHHHEEEE-CCCHH-H-HHHHHHCCCeEecC----C
Confidence 0125678999999999999999996 99999 9 99999999999999 9
Q ss_pred ChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHHh
Q 001705 978 GSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKA 1020 (1024)
Q Consensus 978 A~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~ 1020 (1024)
+.+.++..|+ |++..+..+|....|.+
T Consensus 140 ~~~~~~~~a~----------------~v~~~~~g~g~~~el~~ 166 (183)
T PRK09484 140 AHPLLLPRAD----------------YVTRIAGGRGAVREVCD 166 (183)
T ss_pred hhHHHHHhCC----------------EEecCCCCCCHHHHHHH
Confidence 9888888888 88877777777655543
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.7e-07 Score=109.73 Aligned_cols=127 Identities=17% Similarity=0.105 Sum_probs=85.9
Q ss_pred CCCcEEEEEeCCCC---CCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeC
Q 001705 475 PHKPTILALSRPDP---KKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYP 551 (1024)
Q Consensus 475 ~~~~~Il~vgRld~---~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~ 551 (1024)
.+.++++..|.... .+-...+++|+..+. ..+.+.+|...... ....++|.+.
T Consensus 238 ~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~-----~~~i~~~g~~~~~~-------------------~~~~~~v~~~ 293 (401)
T cd03784 238 GRPPVYVGFGSMVVRDPEALARLDVEAVATLG-----QRAILSLGWGGLGA-------------------EDLPDNVRVV 293 (401)
T ss_pred CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcC-----CeEEEEccCccccc-------------------cCCCCceEEe
Confidence 44567778888743 344556666666541 23334555443210 2345689999
Q ss_pred CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhhccCCcEEEeCCC--CHHHH
Q 001705 552 KHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----VDILKALNNGLLVDPH--DQNAI 625 (1024)
Q Consensus 552 g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~----~eii~~~~~Gllv~p~--d~~~l 625 (1024)
+++++ ..+|..| |++|.- |-..++.||+++|+|+|....++- .+.+...+.|+.+++. +.+++
T Consensus 294 ~~~p~---~~ll~~~----d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~~l 362 (401)
T cd03784 294 DFVPH---DWLLPRC----AAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAERL 362 (401)
T ss_pred CCCCH---HHHhhhh----heeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHHHH
Confidence 99754 5678888 899933 335899999999999999876652 3344555678877665 68999
Q ss_pred HHHHHHHHhCH
Q 001705 626 ADALLKLLADK 636 (1024)
Q Consensus 626 a~aI~~ll~d~ 636 (1024)
+++|.++++++
T Consensus 363 ~~al~~~l~~~ 373 (401)
T cd03784 363 AAALRRLLDPP 373 (401)
T ss_pred HHHHHHHhCHH
Confidence 99999999854
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=4.4e-09 Score=118.25 Aligned_cols=71 Identities=13% Similarity=0.148 Sum_probs=65.0
Q ss_pred CCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeE
Q 001705 925 FASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAY 1004 (1024)
Q Consensus 925 gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~ 1004 (1024)
+..|+.+++.+++++|++++++++| ||+.| | ++|++.+|.|||| ||.|.+++.|+ +
T Consensus 246 ~k~K~~~L~~la~~lgi~~~qtIaV-GDg~N-D-l~m~~~AGlgiA~-----nAkp~Vk~~Ad----------------~ 301 (322)
T PRK11133 246 AQYKADTLTRLAQEYEIPLAQTVAI-GDGAN-D-LPMIKAAGLGIAY-----HAKPKVNEQAQ----------------V 301 (322)
T ss_pred cccHHHHHHHHHHHcCCChhhEEEE-ECCHH-H-HHHHHHCCCeEEe-----CCCHHHHhhCC----------------E
Confidence 4589999999999999999999997 99999 9 9999999999998 58999999999 7
Q ss_pred eccccChhHHHHHHH
Q 001705 1005 IEESYEPQDLSAALK 1019 (1024)
Q Consensus 1005 vt~~~~~dgI~~aL~ 1019 (1024)
++...+-+||..-|-
T Consensus 302 ~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 302 TIRHADLMGVLCILS 316 (322)
T ss_pred EecCcCHHHHHHHhc
Confidence 878889999887663
|
|
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.8e-07 Score=93.57 Aligned_cols=180 Identities=16% Similarity=0.149 Sum_probs=113.8
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++|...|. |+.-||.++.|-+|+..|+++| ++|+|+|+....+.. + .+..
T Consensus 3 kIaIiGtrGI----------Pa~YGGfET~ve~L~~~l~~~g--~~v~Vyc~~~~~~~~--------~--------~~y~ 54 (185)
T PF09314_consen 3 KIAIIGTRGI----------PARYGGFETFVEELAPRLVSKG--IDVTVYCRSDYYPYK--------E--------FEYN 54 (185)
T ss_pred eEEEEeCCCC----------CcccCcHHHHHHHHHHHHhcCC--ceEEEEEccCCCCCC--------C--------cccC
Confidence 7999998876 5778999999999999999999 999999997432211 1 3346
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCh-HHHHHHHHcc--CC
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADA-GEVAAHLSGA--LN 327 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~-~~~a~~l~~~--~~ 327 (1024)
|++++.+|.... .. . ..+.. ....+..++.-... +..+.||||++.... +.+..+++.. .|
T Consensus 55 gv~l~~i~~~~~-g~--~-------~si~y----d~~sl~~al~~~~~--~~~~~~ii~ilg~~~g~~~~~~~r~~~~~g 118 (185)
T PF09314_consen 55 GVRLVYIPAPKN-GS--A-------ESIIY----DFLSLLHALRFIKQ--DKIKYDIILILGYGIGPFFLPFLRKLRKKG 118 (185)
T ss_pred CeEEEEeCCCCC-Cc--h-------HHHHH----HHHHHHHHHHHHhh--ccccCCEEEEEcCCccHHHHHHHHhhhhcC
Confidence 999999985432 10 1 11111 11111222210000 113578999998763 4444444433 47
Q ss_pred CCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHh
Q 001705 328 VPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVR 407 (1024)
Q Consensus 328 ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~ 407 (1024)
.|++++.|++.+.. ..+.......++ ..|+.+.+.||.+|+-|+.-.+++...|..
T Consensus 119 ~~v~vN~DGlEWkR-------~KW~~~~k~~lk-----~~E~~avk~ad~lIaDs~~I~~y~~~~y~~------------ 174 (185)
T PF09314_consen 119 GKVVVNMDGLEWKR-------AKWGRPAKKYLK-----FSEKLAVKYADRLIADSKGIQDYIKERYGR------------ 174 (185)
T ss_pred CcEEECCCcchhhh-------hhcCHHHHHHHH-----HHHHHHHHhCCEEEEcCHHHHHHHHHHcCC------------
Confidence 79999999885432 112211111121 137788999999999998777766555541
Q ss_pred hhcCccccCCCCCcEEEeCCCCC
Q 001705 408 RQRGVSCFGRFMPRMVVIPPGMD 430 (1024)
Q Consensus 408 ~~~g~~~~g~~~~ki~VIPnGiD 430 (1024)
.+..+||.|.|
T Consensus 175 ------------~~s~~IaYGad 185 (185)
T PF09314_consen 175 ------------KKSTFIAYGAD 185 (185)
T ss_pred ------------CCcEEecCCCC
Confidence 27899999976
|
|
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.80 E-value=6.6e-06 Score=92.95 Aligned_cols=264 Identities=20% Similarity=0.251 Sum_probs=162.0
Q ss_pred CcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCC
Q 001705 303 TWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTST 382 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S 382 (1024)
.+||++.+--...-.....-.+..++|++.-- |+++..-...|.....+ .+.+++..|.|++.|
T Consensus 122 ~~P~l~Ii~EtElWPnli~e~~~~~~p~~LvN--------------aRLS~rS~~~y~k~~~~--~~~~~~~i~li~aQs 185 (419)
T COG1519 122 WRPKLLIIMETELWPNLINELKRRGIPLVLVN--------------ARLSDRSFARYAKLKFL--ARLLFKNIDLILAQS 185 (419)
T ss_pred cCCCEEEEEeccccHHHHHHHHHcCCCEEEEe--------------eeechhhhHHHHHHHHH--HHHHHHhcceeeecC
Confidence 47997775432222222233455689987643 33333223344444444 566789999999999
Q ss_pred HHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCC
Q 001705 383 RQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLP 462 (1024)
Q Consensus 383 ~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p 462 (1024)
+.+.+++..+--. ++.+.-| +-+ ..... ...+
T Consensus 186 e~D~~Rf~~LGa~-------------------------~v~v~GN-lKf--d~~~~--------------------~~~~ 217 (419)
T COG1519 186 EEDAQRFRSLGAK-------------------------PVVVTGN-LKF--DIEPP--------------------PQLA 217 (419)
T ss_pred HHHHHHHHhcCCc-------------------------ceEEecc-eee--cCCCC--------------------hhhH
Confidence 9888875443211 3444333 111 10000 0011
Q ss_pred cchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHc
Q 001705 463 PMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKY 542 (1024)
Q Consensus 463 ~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~ 542 (1024)
...+..+... .+.++++++.+. ...--+.+++++..++ ...|++.+|+-.+. .+-...+.++++..
T Consensus 218 ~~~~~~r~~l-~~~r~v~iaaST--H~GEeei~l~~~~~l~--~~~~~~llIlVPRH---------pERf~~v~~l~~~~ 283 (419)
T COG1519 218 AELAALRRQL-GGHRPVWVAAST--HEGEEEIILDAHQALK--KQFPNLLLILVPRH---------PERFKAVENLLKRK 283 (419)
T ss_pred HHHHHHHHhc-CCCCceEEEecC--CCchHHHHHHHHHHHH--hhCCCceEEEecCC---------hhhHHHHHHHHHHc
Confidence 1111222222 233888998888 2233355889999985 56677776554432 34567788888888
Q ss_pred CCCCCEEe-CC---CCC--------CCCHHHHHHHhhcCCcEEEe-cCCCCCCCHHHHHHHHcCCcEEEcCC----CCch
Q 001705 543 DLYGQVAY-PK---HHK--------QSDVPDIYRLAAKTKGVFIN-PALVEPFGLTIIEAAAYGLPVVATKN----GGPV 605 (1024)
Q Consensus 543 ~l~~~V~~-~g---~~~--------~~el~~ly~~A~~~~dv~v~-ps~~Egfgl~llEAmA~G~PVVat~~----Gg~~ 605 (1024)
|+.- ..+ -+ ..+ --|+..+|..| |++++ -|+.+--|--++|++++|+|||.-.. ..+.
T Consensus 284 gl~~-~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~a----diAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~ 358 (419)
T COG1519 284 GLSV-TRRSQGDPPFSDTDVLLGDTMGELGLLYGIA----DIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIA 358 (419)
T ss_pred CCeE-EeecCCCCCCCCCcEEEEecHhHHHHHHhhc----cEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHH
Confidence 8741 111 11 111 12789999999 77655 47776567889999999999998652 2233
Q ss_pred hhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHh
Q 001705 606 DILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIH 651 (1024)
Q Consensus 606 eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~ 651 (1024)
+-+...+.|+.|+ |.+.+++++..++++++.++++++++...+.
T Consensus 359 ~~l~~~ga~~~v~--~~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~ 402 (419)
T COG1519 359 ERLLQAGAGLQVE--DADLLAKAVELLLADEDKREAYGRAGLEFLA 402 (419)
T ss_pred HHHHhcCCeEEEC--CHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 3334445688887 6899999999999999999999999998873
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=98.78 E-value=3e-06 Score=98.96 Aligned_cols=111 Identities=21% Similarity=0.198 Sum_probs=75.2
Q ss_pred CCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCch----hhhccCCcEEEeCC
Q 001705 544 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPV----DILKALNNGLLVDP 619 (1024)
Q Consensus 544 l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~----eii~~~~~Gllv~p 619 (1024)
+.++|.+.+++++ .+++..| |++|..+ | ..++.||+++|+|+|.....+-. +.+.....|..++.
T Consensus 273 ~~~~v~~~~~~p~---~~ll~~~----~~~I~hg---G-~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~ 341 (392)
T TIGR01426 273 LPPNVEVRQWVPQ---LEILKKA----DAFITHG---G-MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPP 341 (392)
T ss_pred CCCCeEEeCCCCH---HHHHhhC----CEEEECC---C-chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEecc
Confidence 3467888888865 3778888 8988653 3 24789999999999997654433 23444567877764
Q ss_pred C--CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 001705 620 H--DQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSH 665 (1024)
Q Consensus 620 ~--d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~ 665 (1024)
. +.++++++|.+++.+++.++.+.+-+.+....-.-+..++...+.
T Consensus 342 ~~~~~~~l~~ai~~~l~~~~~~~~~~~l~~~~~~~~~~~~aa~~i~~~ 389 (392)
T TIGR01426 342 EEVTAEKLREAVLAVLSDPRYAERLRKMRAEIREAGGARRAADEIEGF 389 (392)
T ss_pred ccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHh
Confidence 3 578999999999999876555543333322344555555444443
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.74 E-value=3.4e-06 Score=98.41 Aligned_cols=151 Identities=18% Similarity=0.279 Sum_probs=96.5
Q ss_pred CCCCCHHHHHHHHhhccccCCCCcEEEEE--ecCCCcccccccchHHHHHHHHHHHHcCCCC--------------CEEe
Q 001705 487 DPKKNVTTLLKAFGECQPLRELANMTLIL--GNRDDIEDMSNSSSVVLTTVLKLIDKYDLYG--------------QVAY 550 (1024)
Q Consensus 487 d~~Kgi~~ll~A~~~l~~l~~~~~l~LIv--G~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~--------------~V~~ 550 (1024)
...++++.+++++..+.+ . +++.+++ .+..+ ...+.+.+...++.. .+.+
T Consensus 218 e~~~~lp~~l~al~~L~~--~-~~~~~v~~~~~~~~-----------~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v 283 (396)
T TIGR03492 218 EAYRNLKLLLRALEALPD--S-QPFVFLAAIVPSLS-----------LEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEV 283 (396)
T ss_pred HHHccHHHHHHHHHHHhh--C-CCeEEEEEeCCCCC-----------HHHHHHHHHhcCceecCCccccchhhccCceEE
Confidence 345788899999999842 2 5555533 22222 233444444444431 2344
Q ss_pred CCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCch---hhhcc----CCcEEEeCCCCHH
Q 001705 551 PKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPV---DILKA----LNNGLLVDPHDQN 623 (1024)
Q Consensus 551 ~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~---eii~~----~~~Gllv~p~d~~ 623 (1024)
..+ ..++.++|+.| |++|..| |.+..|++++|+|+|.....+.. .+... ...++.+...+++
T Consensus 284 ~~~--~~~~~~~l~~A----DlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~l~~~~~~ 352 (396)
T TIGR03492 284 LLG--RGAFAEILHWA----DLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVFLASKNPE 352 (396)
T ss_pred Eec--hHhHHHHHHhC----CEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEecCCCCHH
Confidence 333 45789999999 9999874 56669999999999998744431 22222 1245555566889
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHH
Q 001705 624 AIADALLKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNY 662 (1024)
Q Consensus 624 ~la~aI~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~ 662 (1024)
.+++++.++++|++.++++.+++++.. .....+.+++..
T Consensus 353 ~l~~~l~~ll~d~~~~~~~~~~~~~~lg~~~a~~~ia~~i 392 (396)
T TIGR03492 353 QAAQVVRQLLADPELLERCRRNGQERMGPPGASARIAESI 392 (396)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 999999999999988888775555444 344445444433
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.69 E-value=5e-06 Score=96.00 Aligned_cols=241 Identities=19% Similarity=0.163 Sum_probs=139.7
Q ss_pred CcceEEEEcC-CChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeC
Q 001705 303 TWPYVIHGHY-ADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTS 381 (1024)
Q Consensus 303 ~~pDvIh~h~-~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~ 381 (1024)
.+||+|.+|. ....+.+++.+..+++|+++.--++ +. .|. + -+..|++ +-+-|++.+++
T Consensus 92 ~~Pd~vlv~GD~~~~la~alaA~~~~IPv~HveaG~-rs-------~~~----~---eE~~r~~-----i~~la~l~f~~ 151 (365)
T TIGR03568 92 LKPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHGGE-VT-------EGA----I---DESIRHA-----ITKLSHLHFVA 151 (365)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHhCCcEEEEECCc-cC-------CCC----c---hHHHHHH-----HHHHHhhccCC
Confidence 5899999987 5667777888888899998533321 00 010 0 0111222 34466788889
Q ss_pred CHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCC-CCCCCCccccCCCCCCccccccccCccccccCC
Q 001705 382 TRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPP-GMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRN 460 (1024)
Q Consensus 382 S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPn-GiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1024)
|+...+.+.+. |....++.++-| ++|.-......
T Consensus 152 t~~~~~~L~~e-----------------------g~~~~~i~~tG~~~iD~l~~~~~~---------------------- 186 (365)
T TIGR03568 152 TEEYRQRVIQM-----------------------GEDPDRVFNVGSPGLDNILSLDLL---------------------- 186 (365)
T ss_pred CHHHHHHHHHc-----------------------CCCCCcEEEECCcHHHHHHhhhcc----------------------
Confidence 98777765321 111226666544 55532111100
Q ss_pred CCcchHHHhhhhCCCCCcEEEEEeCC------CCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHH
Q 001705 461 LPPMWSEVMRFFTNPHKPTILALSRP------DPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTT 534 (1024)
Q Consensus 461 ~p~~~~~~~~~~~~~~~~~Il~vgRl------d~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~ 534 (1024)
.......++..++++++++..-.. +..+.+..+++++.++ . .++.++.-+.+. ....+...
T Consensus 187 --~~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~---~--~~~~vi~P~~~p------~~~~i~~~ 253 (365)
T TIGR03568 187 --SKEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDEL---N--KNYIFTYPNADA------GSRIINEA 253 (365)
T ss_pred --CHHHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHh---c--cCCEEEEeCCCC------CchHHHHH
Confidence 011222333333344555444332 2223455666666554 2 133344322211 11223334
Q ss_pred HHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcE
Q 001705 535 VLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNG 614 (1024)
Q Consensus 535 i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~G 614 (1024)
+...... .++|.+++.++..++..+++.| +++|--| -|. +.||.++|+|+|+ .|.-+|.+..+.|.
T Consensus 254 i~~~~~~---~~~v~l~~~l~~~~~l~Ll~~a----~~vitdS----Sgg-i~EA~~lg~Pvv~--l~~R~e~~~~g~nv 319 (365)
T TIGR03568 254 IEEYVNE---HPNFRLFKSLGQERYLSLLKNA----DAVIGNS----SSG-IIEAPSFGVPTIN--IGTRQKGRLRADSV 319 (365)
T ss_pred HHHHhcC---CCCEEEECCCChHHHHHHHHhC----CEEEEcC----hhH-HHhhhhcCCCEEe--ecCCchhhhhcCeE
Confidence 4444221 4679999999999999999999 7887432 133 3899999999995 45677888778888
Q ss_pred EEeCCCCHHHHHHHHHHHHhCHH
Q 001705 615 LLVDPHDQNAIADALLKLLADKN 637 (1024)
Q Consensus 615 llv~p~d~~~la~aI~~ll~d~~ 637 (1024)
++| +.|+++|.+++.++ .++.
T Consensus 320 l~v-g~~~~~I~~a~~~~-~~~~ 340 (365)
T TIGR03568 320 IDV-DPDKEEIVKAIEKL-LDPA 340 (365)
T ss_pred EEe-CCCHHHHHHHHHHH-hChH
Confidence 888 56899999999995 4443
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=98.60 E-value=5.9e-06 Score=93.46 Aligned_cols=118 Identities=19% Similarity=0.318 Sum_probs=79.3
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCC
Q 001705 475 PHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHH 554 (1024)
Q Consensus 475 ~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~ 554 (1024)
+.+.+++++|..+.. .+++++..+. ...+. ++|.... + .-.++|.+.++.
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~~----~~~~~-v~g~~~~-~--------------------~~~~ni~~~~~~ 240 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKALP----DYQFI-VFGPNAA-D--------------------PRPGNIHVRPFS 240 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhCC----CCeEE-EEcCCcc-c--------------------ccCCCEEEeecC
Confidence 346688999998776 6677777762 12333 4465420 0 014678877762
Q ss_pred CCCCHHHHHHHhhcCCcEEEecCCCCCCCH-HHHHHHHcCCcEEEcCCCCchh------hhccCCcEEEeCCC--CHHHH
Q 001705 555 KQSDVPDIYRLAAKTKGVFINPALVEPFGL-TIIEAAAYGLPVVATKNGGPVD------ILKALNNGLLVDPH--DQNAI 625 (1024)
Q Consensus 555 ~~~el~~ly~~A~~~~dv~v~ps~~Egfgl-~llEAmA~G~PVVat~~Gg~~e------ii~~~~~Gllv~p~--d~~~l 625 (1024)
..++.+++..| |++|.-+ |. ++.|++++|+|+|.-...+..| .++..+.|..+++. +++.+
T Consensus 241 -~~~~~~~m~~a----d~vIs~~-----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l 310 (318)
T PF13528_consen 241 -TPDFAELMAAA----DLVISKG-----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERL 310 (318)
T ss_pred -hHHHHHHHHhC----CEEEECC-----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHH
Confidence 37899999999 8998653 44 5999999999999987654322 33445567776543 57888
Q ss_pred HHHHHHH
Q 001705 626 ADALLKL 632 (1024)
Q Consensus 626 a~aI~~l 632 (1024)
+++|.++
T Consensus 311 ~~~l~~~ 317 (318)
T PF13528_consen 311 AEFLERL 317 (318)
T ss_pred HHHHhcC
Confidence 8888754
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.2e-05 Score=91.19 Aligned_cols=112 Identities=17% Similarity=0.259 Sum_probs=74.7
Q ss_pred CCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcC
Q 001705 490 KNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKT 569 (1024)
Q Consensus 490 Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~ 569 (1024)
.+...+++++..+ +.+.+++|+.+.. . + .+.+++.+.++.+ +++.++|..|
T Consensus 198 ~~~~~l~~~l~~~------~~~~~i~~~~~~~-~----------------~--~~~~~v~~~~~~~-~~~~~~l~~a--- 248 (321)
T TIGR00661 198 EYRYKILELLGKI------ANVKFVCYSYEVA-K----------------N--SYNENVEIRRITT-DNFKELIKNA--- 248 (321)
T ss_pred CCHHHHHHHHHhC------CCeEEEEeCCCCC-c----------------c--ccCCCEEEEECCh-HHHHHHHHhC---
Confidence 3456777777665 3555666643210 0 1 2245788888754 6899999999
Q ss_pred CcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchh------hhccCCcEEEeCCCCHHHHHHHHHHHHhCH
Q 001705 570 KGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVD------ILKALNNGLLVDPHDQNAIADALLKLLADK 636 (1024)
Q Consensus 570 ~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~e------ii~~~~~Gllv~p~d~~~la~aI~~ll~d~ 636 (1024)
|++|.-+ | ..++.|++++|+|+|.....+..| .+.+.+.|+.++..+. ++.+++...++++
T Consensus 249 -d~vI~~~---G-~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~-~~~~~~~~~~~~~ 315 (321)
T TIGR00661 249 -ELVITHG---G-FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKEL-RLLEAILDIRNMK 315 (321)
T ss_pred -CEEEECC---C-hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhhH-HHHHHHHhccccc
Confidence 8999765 2 257999999999999988755323 3445567888887666 5555555555543
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.3e-07 Score=95.54 Aligned_cols=70 Identities=4% Similarity=0.114 Sum_probs=59.0
Q ss_pred EEEEecCCCCCCCc-----------hhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHH---HHHHh-----cCCCC
Q 001705 751 VIAADCYDSDGNTT-----------ETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETM---EAIRR-----CTVNI 811 (1024)
Q Consensus 751 lIa~DlDGTl~~~~-----------~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~---~~l~~-----~~i~~ 811 (1024)
+|++|+||||++++ ..+++.+.+++++++++ |+.|+++|||++..+. +++.. .+++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~----G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp- 75 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNN----GYKILYLTARPIGQADRTRSYLSQIKQDGHNLP- 75 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHc----CCeEEEEcCCcHHHHHHHHHHHHHhhhccccCC-
Confidence 35699999988876 68899999999999998 9999999999999874 78877 2342
Q ss_pred CCCCEEEecCCceEEc
Q 001705 812 EDFDAIVCNSGSELYF 827 (1024)
Q Consensus 812 ~~~d~lI~~nGa~I~~ 827 (1024)
.+++|++||+.++.
T Consensus 76 --~g~li~~~g~~~~~ 89 (157)
T smart00775 76 --HGPVLLSPDRLFAA 89 (157)
T ss_pred --CceEEEcCCcchhh
Confidence 35899999998864
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=98.50 E-value=2.1e-06 Score=84.59 Aligned_cols=128 Identities=19% Similarity=0.281 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCCeEEEEecCCCCCCccccccCCcchHH
Q 001705 198 VKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWPYIHE 277 (1024)
Q Consensus 198 ~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~lwp~~~~ 277 (1024)
..++.++++.|.+.| |+|+++|.....+ .. ....|+.+++++.+.+ . .++++.
T Consensus 10 ~~~~~~~~~~L~~~g--~~V~ii~~~~~~~--------~~---------~~~~~i~~~~~~~~~k------~-~~~~~~- 62 (139)
T PF13477_consen 10 STFIYNLAKELKKRG--YDVHIITPRNDYE--------KY---------EIIEGIKVIRLPSPRK------S-PLNYIK- 62 (139)
T ss_pred HHHHHHHHHHHHHCC--CEEEEEEcCCCch--------hh---------hHhCCeEEEEecCCCC------c-cHHHHH-
Confidence 347889999999999 9999999853211 00 1235899999874311 1 223221
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCh-HHHHHHHHccCC-CCEEEEeCCCchhhhHHHHhcCCCCcch
Q 001705 278 FVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADA-GEVAAHLSGALN-VPMVLTGHSLGRNKFEQLLKQGRLPKDI 355 (1024)
Q Consensus 278 f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~-~~~a~~l~~~~~-ipiV~t~H~l~~~~~~~l~~~g~~~~~i 355 (1024)
+ ..+.+.+.+ .+||+||+|.... +.++.++++..+ +|+|++.|+++... .+.
T Consensus 63 ----~----~~l~k~ik~-------~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~------~~~----- 116 (139)
T PF13477_consen 63 ----Y----FRLRKIIKK-------EKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYN------SSK----- 116 (139)
T ss_pred ----H----HHHHHHhcc-------CCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeec------CCc-----
Confidence 1 123333333 5799999999864 787888877787 99999999763211 100
Q ss_pred hhHHHHHHHHHHHHHhhhcCCEEEeCC
Q 001705 356 NASYKIMRRIEAEELGLDASEMVVTST 382 (1024)
Q Consensus 356 ~~~y~~~r~i~~e~~~l~~Ad~Vi~~S 382 (1024)
..++.+. .++.+++.||.|++.|
T Consensus 117 --~~~~~~~--~~~~~~k~~~~ii~~~ 139 (139)
T PF13477_consen 117 --KKKLKKF--IIKFAFKRADKIIVQS 139 (139)
T ss_pred --hHHHHHH--HHHHHHHhCCEEEEcC
Confidence 0112222 2567899999999875
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.48 E-value=3.2e-07 Score=89.10 Aligned_cols=128 Identities=14% Similarity=0.190 Sum_probs=89.8
Q ss_pred EEEecCCCCCCCch--------hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCc
Q 001705 752 IAADCYDSDGNTTE--------TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGS 823 (1024)
Q Consensus 752 Ia~DlDGTl~~~~~--------~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa 823 (1024)
++||+||||...+. .+.+.+.++|++++++ |+.++++|||....+..+++.+++. ..++.++++++.
T Consensus 2 ~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----g~~i~ivS~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~ 76 (139)
T cd01427 2 VLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEK----GIKLALATNKSRREVLELLEELGLD-DYFDPVITSNGA 76 (139)
T ss_pred eEEccCCceEccCccccccccCCcCcCHHHHHHHHHHC----CCeEEEEeCchHHHHHHHHHHcCCc-hhhhheeccchh
Confidence 56999999776654 6778899999999987 9999999999999999999997763 123344443333
Q ss_pred eEEcCCCccccCcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHh
Q 001705 824 ELYFPWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRM 903 (1024)
Q Consensus 824 ~I~~~~~~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~ 903 (1024)
...... . . ...
T Consensus 77 ~~~~~~------~-----------------------~--------~~~-------------------------------- 87 (139)
T cd01427 77 AIYYPK------E-----------------------G--------LFL-------------------------------- 87 (139)
T ss_pred hhhccc------c-----------------------c--------ccc--------------------------------
Confidence 211100 0 0 000
Q ss_pred cCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCC-ceEE
Q 001705 904 RGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLH-KTLI 970 (1024)
Q Consensus 904 ~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag-~gVa 970 (1024)
. -+.+..+-.|....+.+++.++++++++++| ||+.+ | ++|++.+| .+++
T Consensus 88 -----------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-gD~~~-d-~~~~~~~g~~~i~ 138 (139)
T cd01427 88 -----------G---GGPFDIGKPNPDKLLAALKLLGVDPEEVLMV-GDSLN-D-IEMAKAAGGLGVA 138 (139)
T ss_pred -----------c---ccccccCCCCHHHHHHHHHHcCCChhhEEEe-CCCHH-H-HHHHHHcCCceee
Confidence 1 1222233457788888999999998999886 99999 9 99999854 4554
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=98.43 E-value=1.5e-06 Score=94.92 Aligned_cols=193 Identities=9% Similarity=0.065 Sum_probs=111.9
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECC---CCHHHHHHHHHhcCCCCCCCCEEEecCCceEEc
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTG---SSLGETMEAIRRCTVNIEDFDAIVCNSGSELYF 827 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTG---R~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~ 827 (1024)
.+++|+||||.+.++.++ .+.++|++++++ |+.|+++|| |+...+...++.+|++. .+|-+|+++|+.+.+
T Consensus 3 ~~~~D~DGtl~~~~~~i~-~a~~~l~~l~~~----g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~-~~~~iit~~~~~~~~ 76 (249)
T TIGR01457 3 GYLIDLDGTMYKGKERIP-EAETFVHELQKR----DIPYLFVTNNSTRTPESVAEMLASFDIPA-TLETVFTASMATADY 76 (249)
T ss_pred EEEEeCCCceEcCCeeCc-CHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHHHHcCCCC-ChhhEeeHHHHHHHH
Confidence 456999999888766665 789999999998 999999995 99999999999999974 567899999987655
Q ss_pred CCCccccCcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCe
Q 001705 828 PWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFR 907 (1024)
Q Consensus 828 ~~~~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~ 907 (1024)
-. ....+.. -+....+.+...+....-. .... . .--+..-.+.......+......++ .+
T Consensus 77 l~----~~~~~~~--v~~lg~~~l~~~l~~~g~~--------~~~~--~-~~~Vvvg~~~~~~y~~l~~a~~~l~-~g-- 136 (249)
T TIGR01457 77 MN----DLKLEKT--VYVIGEEGLKEAIKEAGYV--------EDKE--K-PDYVVVGLDRQIDYEKFATATLAIR-KG-- 136 (249)
T ss_pred HH----hcCCCCE--EEEEcChhHHHHHHHcCCE--------ecCC--C-CCEEEEeCCCCCCHHHHHHHHHHHH-CC--
Confidence 30 0000100 0111223344444322110 0000 0 0111111111111222222222222 12
Q ss_pred EEEEEecCCe-----------------------EEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCC-CCChHHhhc
Q 001705 908 CNLVYTRAGS-----------------------RLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKG-DTDYEDLLV 963 (1024)
Q Consensus 908 ~~v~~s~~~~-----------------------~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~-N~D~~~Ml~ 963 (1024)
+.++.+++.. ..+....+=-+...++.+++++++++++++++ ||+. + | +.+=+
T Consensus 137 ~~~i~tN~D~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~V-GD~~~~-D-i~~a~ 213 (249)
T TIGR01457 137 AHFIGTNGDLAIPTERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETLMV-GDNYLT-D-IRAGI 213 (249)
T ss_pred CeEEEECCCCCCCCCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCcccEEEE-CCCchh-h-HHHHH
Confidence 2233333210 01111122223567888999999999999996 9996 6 9 88888
Q ss_pred CCCc-eEEec
Q 001705 964 GLHK-TLILR 972 (1024)
Q Consensus 964 ~ag~-gVaMg 972 (1024)
.+|. ++.+.
T Consensus 214 ~~G~~~v~v~ 223 (249)
T TIGR01457 214 DAGIDTLLVH 223 (249)
T ss_pred HcCCcEEEEc
Confidence 8886 56665
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.32 E-value=7.6e-07 Score=86.38 Aligned_cols=54 Identities=15% Similarity=0.185 Sum_probs=50.3
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccc
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad 987 (1024)
+|-.+...|++++++.++++.. +||+.| | +++|+.+|.+||+. +|+++++..|+
T Consensus 83 dK~~a~~~L~~~~~l~~e~~ay-iGDD~~-D-lpvm~~vGls~a~~----dAh~~v~~~a~ 136 (170)
T COG1778 83 DKLAAFEELLKKLNLDPEEVAY-VGDDLV-D-LPVMEKVGLSVAVA----DAHPLLKQRAD 136 (170)
T ss_pred hHHHHHHHHHHHhCCCHHHhhh-hcCccc-c-HHHHHHcCCccccc----ccCHHHHHhhH
Confidence 4777888899999999999977 599999 9 99999999999999 99999999999
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=98.31 E-value=5.2e-05 Score=84.31 Aligned_cols=98 Identities=21% Similarity=0.323 Sum_probs=73.7
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCC
Q 001705 477 KPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQ 556 (1024)
Q Consensus 477 ~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~ 556 (1024)
+.+++++|..++.+....+++++..+ ....++.+|+|.+.. ...++.+.+... +++.+.++ .
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~i~vv~G~~~~----------~~~~l~~~~~~~---~~i~~~~~--~ 232 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAES---QINISITLVTGSSNP----------NLDELKKFAKEY---PNIILFID--V 232 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhcc---ccCceEEEEECCCCc----------CHHHHHHHHHhC---CCEEEEeC--H
Confidence 46899999999987667888888765 233466678887532 124455555543 47888887 4
Q ss_pred CCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCC
Q 001705 557 SDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKN 601 (1024)
Q Consensus 557 ~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~ 601 (1024)
++++++++.| |++|.+ .|.|+.|++++|+|+|+-..
T Consensus 233 ~~m~~lm~~a----Dl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 233 ENMAELMNEA----DLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred HHHHHHHHHC----CEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 6899999999 999974 57999999999999998754
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=0.00075 Score=81.24 Aligned_cols=165 Identities=15% Similarity=0.114 Sum_probs=102.4
Q ss_pred HHhhhhCCCC-CcEEEEEeCCCC-----CCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHH
Q 001705 467 EVMRFFTNPH-KPTILALSRPDP-----KKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLID 540 (1024)
Q Consensus 467 ~~~~~~~~~~-~~~Il~vgRld~-----~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~ 540 (1024)
++.++..... .+++++.|.... .+-+..+++||+.+. .++ ++-.+.+.. .
T Consensus 286 ~l~~fl~~~~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~-----~~v-iw~~~~~~~------------------~ 341 (507)
T PHA03392 286 YLEEFLNNSTNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-----YNV-LWKYDGEVE------------------A 341 (507)
T ss_pred HHHHHHhcCCCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCC-----CeE-EEEECCCcC------------------c
Confidence 3444443333 467788888642 334577778887762 122 222221110 0
Q ss_pred HcCCCCCEEeCCCCCCCCHHHHHH--HhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhhccCCcE
Q 001705 541 KYDLYGQVAYPKHHKQSDVPDIYR--LAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG----PVDILKALNNG 614 (1024)
Q Consensus 541 ~~~l~~~V~~~g~~~~~el~~ly~--~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg----~~eii~~~~~G 614 (1024)
.++.++|.+.+++|+. ++++ .+ ++||. -|-..++.||+.+|+|+|+-...+ ....+...+.|
T Consensus 342 -~~~p~Nv~i~~w~Pq~---~lL~hp~v----~~fIt----HGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G 409 (507)
T PHA03392 342 -INLPANVLTQKWFPQR---AVLKHKNV----KAFVT----QGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIG 409 (507)
T ss_pred -ccCCCceEEecCCCHH---HHhcCCCC----CEEEe----cCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcE
Confidence 2356789999999875 5553 35 78874 344678999999999999987543 22334445678
Q ss_pred EEeCCC--CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 001705 615 LLVDPH--DQNAIADALLKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 615 llv~p~--d~~~la~aI~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~ 667 (1024)
+.++.. +.+++.+||.+++++|.-++.+.+-+.... +..+-.+-+-.+.+.+.
T Consensus 410 ~~l~~~~~t~~~l~~ai~~vl~~~~y~~~a~~ls~~~~~~p~~~~~~av~~iE~v~ 465 (507)
T PHA03392 410 RALDTVTVSAAQLVLAIVDVIENPKYRKNLKELRHLIRHQPMTPLHKAIWYTEHVI 465 (507)
T ss_pred EEeccCCcCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 888754 578999999999999876665555544444 34455555555555543
|
|
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.22 E-value=5.1e-06 Score=83.28 Aligned_cols=197 Identities=15% Similarity=0.192 Sum_probs=114.3
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCC
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWR 830 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~ 830 (1024)
++-+|.||||..+...++++..+.|+.+++ .+.+.++-|-.++-+.+-+..-=+ ..|||.-+.||-.-|.. |
T Consensus 13 l~lfdvdgtLt~~r~~~~~e~~~~l~~lr~-----~v~ig~VggsDl~k~~eqlG~~Vl--~~fDY~F~ENGl~~yk~-g 84 (252)
T KOG3189|consen 13 LCLFDVDGTLTPPRQKVTPEMLEFLQKLRK-----KVTIGFVGGSDLSKQQEQLGDNVL--EEFDYVFSENGLVAYKG-G 84 (252)
T ss_pred EEEEecCCccccccccCCHHHHHHHHHHhh-----heEEEEeecHHHHHHHHHhchhHH--hhhcccccCCCeeEeeC-C
Confidence 334999999988888999999999999886 588999999888776666522112 46999999999988875 5
Q ss_pred ccccCcchhhhhcccCCchhHHHHHhhhhhcc-CCCCcccccccCCCCceEEEEEecCCCc------------hhhHHHH
Q 001705 831 DMVADGDYEAHVEYRWPGENVRSVVPRVARAE-DGAEDDIVGFVDASSSRCQSYSIKPGAE------------TRKVDNI 897 (1024)
Q Consensus 831 ~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~-~~~~~~~~~~~~~~~~~k~~~~~~~~~~------------~~~~~el 897 (1024)
..........++......+-+.-.+..+.... +.+.+..++-.... ..++-.-++... ...-+.+
T Consensus 85 k~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgM--iNvsPIGR~cs~EER~eF~e~Dkk~~iR~K~ 162 (252)
T KOG3189|consen 85 KLLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGM--INVSPIGRNCSQEERNEFEELDKKHKIREKF 162 (252)
T ss_pred cchhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCc--eeccccccccCHHHHHHHHHhhhhhhhHHHH
Confidence 45444444444432211122222222222211 11111111111111 111111111110 0011122
Q ss_pred HHHHHhcCCeEEEEEecC-CeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCC----CCCCChHHhhc
Q 001705 898 RQRLRMRGFRCNLVYTRA-GSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGE----KGDTDYEDLLV 963 (1024)
Q Consensus 898 ~~~L~~~~~~~~v~~s~~-~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGD----s~N~D~~~Ml~ 963 (1024)
.+.|+.......+++|-+ .-.+||.|.|-+|-.-|++|-.. |.+ ++..| || ++| | .+.|.
T Consensus 163 v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d-gf~--~IhFF-GDkT~~GGN-D-yEIf~ 227 (252)
T KOG3189|consen 163 VEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD-GFD--TIHFF-GDKTMPGGN-D-YEIFA 227 (252)
T ss_pred HHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc-CCc--eEEEe-ccccCCCCC-c-ceeee
Confidence 233444444455566654 34799999999999999998775 554 56666 99 789 9 78886
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.14 E-value=1e-05 Score=85.82 Aligned_cols=62 Identities=23% Similarity=0.291 Sum_probs=55.2
Q ss_pred EEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccc
Q 001705 918 RLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 918 ~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad 987 (1024)
.+-.+-.+-+|..+|+.++..+|+++++++++ |||.| | ++||+.+|.+||.. +.+++++.|+
T Consensus 135 v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~-gDs~n-D-lpml~~ag~~ia~n-----~~~~l~~~a~ 196 (212)
T COG0560 135 VVGPICDGEGKAKALRELAAELGIPLEETVAY-GDSAN-D-LPMLEAAGLPIAVN-----PKPKLRALAD 196 (212)
T ss_pred eeeeecCcchHHHHHHHHHHHcCCCHHHeEEE-cCchh-h-HHHHHhCCCCeEeC-----cCHHHHHHHH
Confidence 34445555689999999999999999999996 99999 9 99999999999986 8999998888
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.13 E-value=0.00011 Score=84.26 Aligned_cols=261 Identities=20% Similarity=0.217 Sum_probs=137.6
Q ss_pred HHHHHHHHHHhhhcCCCCCcceEEEEcCC-ChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCC-cchhhHHHHH
Q 001705 285 HIVNMARAIGEQVNGGKPTWPYVIHGHYA-DAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLP-KDINASYKIM 362 (1024)
Q Consensus 285 ~~~~~~~~l~~~~~~g~~~~pDvIh~h~~-~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~-~~i~~~y~~~ 362 (1024)
.+..+.+.+.+ .+||+|.++.- ...+.+++.+..+++| |.++|.--+ .+... ..+. +..
T Consensus 55 ~~~~~~~~~~~-------~~Pd~Vlv~GD~~~~la~alaA~~~~ip-v~HieaGlR--------s~d~~~g~~d---e~~ 115 (346)
T PF02350_consen 55 AIIELADVLER-------EKPDAVLVLGDRNEALAAALAAFYLNIP-VAHIEAGLR--------SGDRTEGMPD---EIN 115 (346)
T ss_dssp HHHHHHHHHHH-------HT-SEEEEETTSHHHHHHHHHHHHTT-E-EEEES-------------S-TTSSTTH---HHH
T ss_pred HHHHHHHHHHh-------cCCCEEEEEcCCchHHHHHHHHHHhCCC-EEEecCCCC--------ccccCCCCch---hhh
Confidence 33444555544 47999998864 5667778888889999 445553100 00111 0111 122
Q ss_pred HHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCC-CCCCCCccccCCCC
Q 001705 363 RRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPP-GMDFSYVTTQDTMG 441 (1024)
Q Consensus 363 r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPn-GiD~~~f~~~~~~~ 441 (1024)
|. .+-+-|++.+++|+...+.+.+. |....+|.++-+ ++|.-......
T Consensus 116 R~-----~i~~la~lhf~~t~~~~~~L~~~-----------------------G~~~~rI~~vG~~~~D~l~~~~~~--- 164 (346)
T PF02350_consen 116 RH-----AIDKLAHLHFAPTEEARERLLQE-----------------------GEPPERIFVVGNPGIDALLQNKEE--- 164 (346)
T ss_dssp HH-----HHHHH-SEEEESSHHHHHHHHHT-----------------------T--GGGEEE---HHHHHHHHHHHT---
T ss_pred hh-----hhhhhhhhhccCCHHHHHHHHhc-----------------------CCCCCeEEEEChHHHHHHHHhHHH---
Confidence 22 24568999999999988876443 112237776654 33322111000
Q ss_pred CCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCC----CCCHHHHHHHHhhccccCCCCcEEEEEec
Q 001705 442 GDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDP----KKNVTTLLKAFGECQPLRELANMTLILGN 517 (1024)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~----~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~ 517 (1024)
..+. .. ...+.....++++|...-... ......+.+++..+.+. .++.+|+--
T Consensus 165 ------------------~~~~-~~-~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~---~~~~vi~~~ 221 (346)
T PF02350_consen 165 ------------------IEEK-YK-NSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER---QNVPVIFPL 221 (346)
T ss_dssp ------------------TCC--HH-HHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH---TTEEEEEE-
T ss_pred ------------------Hhhh-hh-hHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc---CCCcEEEEe
Confidence 0000 00 011111245566665553322 23456777777777532 444443322
Q ss_pred CCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHH-HHHHcCCcE
Q 001705 518 RDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTII-EAAAYGLPV 596 (1024)
Q Consensus 518 ~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~ll-EAmA~G~PV 596 (1024)
. .++.....+.+.+.++ +++.+...++..++..+++.| +++|--| | .+. ||..+|+|+
T Consensus 222 h--------n~p~~~~~i~~~l~~~---~~v~~~~~l~~~~~l~ll~~a----~~vvgdS-----s-GI~eEa~~lg~P~ 280 (346)
T PF02350_consen 222 H--------NNPRGSDIIIEKLKKY---DNVRLIEPLGYEEYLSLLKNA----DLVVGDS-----S-GIQEEAPSLGKPV 280 (346)
T ss_dssp ---------S-HHHHHHHHHHHTT----TTEEEE----HHHHHHHHHHE----SEEEESS-----H-HHHHHGGGGT--E
T ss_pred c--------CCchHHHHHHHHhccc---CCEEEECCCCHHHHHHHHhcc----eEEEEcC-----c-cHHHHHHHhCCeE
Confidence 1 1223445555555555 389999999999999999999 7776432 5 667 999999999
Q ss_pred EEcC-CCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHH
Q 001705 597 VATK-NGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSE 641 (1024)
Q Consensus 597 Vat~-~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~ 641 (1024)
|.-+ .|--++.+..+.+-+ |. .|.+++.++|.+++.+++.+.+
T Consensus 281 v~iR~~geRqe~r~~~~nvl-v~-~~~~~I~~ai~~~l~~~~~~~~ 324 (346)
T PF02350_consen 281 VNIRDSGERQEGRERGSNVL-VG-TDPEAIIQAIEKALSDKDFYRK 324 (346)
T ss_dssp EECSSS-S-HHHHHTTSEEE-ET-SSHHHHHHHHHHHHH-HHHHHH
T ss_pred EEecCCCCCHHHHhhcceEE-eC-CCHHHHHHHHHHHHhChHHHHh
Confidence 9985 455566666555444 75 7999999999999988554443
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.12 E-value=0.00087 Score=75.56 Aligned_cols=363 Identities=16% Similarity=0.131 Sum_probs=207.9
Q ss_pred ceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCC
Q 001705 169 NLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTG 248 (1024)
Q Consensus 169 ~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~ 248 (1024)
+|||+.|..- | |+ ..-..-|.+++.+.+++.-..++|.+..+++....|-+..+.-
T Consensus 3 ~~Kv~~I~GT-----------R-PE----~iKmapli~~~~~~~~~~~~vi~TGQH~d~em~~~~le~~~i~-------- 58 (383)
T COG0381 3 MLKVLTIFGT-----------R-PE----AIKMAPLVKALEKDPDFELIVIHTGQHRDYEMLDQVLELFGIR-------- 58 (383)
T ss_pred ceEEEEEEec-----------C-HH----HHHHhHHHHHHHhCCCCceEEEEecccccHHHHHHHHHHhCCC--------
Confidence 4789988833 2 12 2345578899999988788888888865544332221111100
Q ss_pred CCCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC-ChHHHHHHHHccCC
Q 001705 249 SCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYA-DAGEVAAHLSGALN 327 (1024)
Q Consensus 249 ~~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~-~~~~~a~~l~~~~~ 327 (1024)
.+. +.+..+. ... ...+-....+..+.+++.+ .+||+|.+|.- ...+++++.+...+
T Consensus 59 ~pd---y~L~i~~-----~~~-------tl~~~t~~~i~~~~~vl~~-------~kPD~VlVhGDT~t~lA~alaa~~~~ 116 (383)
T COG0381 59 KPD---YDLNIMK-----PGQ-------TLGEITGNIIEGLSKVLEE-------EKPDLVLVHGDTNTTLAGALAAFYLK 116 (383)
T ss_pred CCC---cchhccc-----cCC-------CHHHHHHHHHHHHHHHHHh-------hCCCEEEEeCCcchHHHHHHHHHHhC
Confidence 000 0000000 000 1122233334444555554 68999999965 45555577777789
Q ss_pred CCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHh
Q 001705 328 VPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVR 407 (1024)
Q Consensus 328 ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~ 407 (1024)
+|+.+---++ .+......-++-|+ .+-.-|++-+++|....+.+.+.
T Consensus 117 IpV~HvEAGl-------------Rt~~~~~PEE~NR~-----l~~~~S~~hfapte~ar~nLl~E--------------- 163 (383)
T COG0381 117 IPVGHVEAGL-------------RTGDLYFPEEINRR-----LTSHLSDLHFAPTEIARKNLLRE--------------- 163 (383)
T ss_pred CceEEEeccc-------------ccCCCCCcHHHHHH-----HHHHhhhhhcCChHHHHHHHHHc---------------
Confidence 9998765543 11111100011122 23457888899998887775331
Q ss_pred hhcCccccCCCCCcEEEeCCCC-CCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEe-C
Q 001705 408 RQRGVSCFGRFMPRMVVIPPGM-DFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALS-R 485 (1024)
Q Consensus 408 ~~~g~~~~g~~~~ki~VIPnGi-D~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vg-R 485 (1024)
|.+..+|.|+-|-+ |.-...... ....+. ....+...+++++|+..+ |
T Consensus 164 --------G~~~~~IfvtGnt~iDal~~~~~~-------------------~~~~~~---~~~~~~~~~~~~~iLvT~HR 213 (383)
T COG0381 164 --------GVPEKRIFVTGNTVIDALLNTRDR-------------------VLEDSK---ILAKGLDDKDKKYILVTAHR 213 (383)
T ss_pred --------CCCccceEEeCChHHHHHHHHHhh-------------------hccchh---hHHhhhccccCcEEEEEcch
Confidence 22233678877653 211111000 000000 011112334555666555 3
Q ss_pred CCC-CCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHH
Q 001705 486 PDP-KKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYR 564 (1024)
Q Consensus 486 ld~-~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~ 564 (1024)
-.- .+++..+++|+.++. ...+++.+|.-..+. ..+.++. ...++-.++|.++..+...+...+..
T Consensus 214 reN~~~~~~~i~~al~~i~--~~~~~~~viyp~H~~---------~~v~e~~--~~~L~~~~~v~li~pl~~~~f~~L~~ 280 (383)
T COG0381 214 RENVGEPLEEICEALREIA--EEYPDVIVIYPVHPR---------PRVRELV--LKRLKNVERVKLIDPLGYLDFHNLMK 280 (383)
T ss_pred hhcccccHHHHHHHHHHHH--HhCCCceEEEeCCCC---------hhhhHHH--HHHhCCCCcEEEeCCcchHHHHHHHH
Confidence 322 288999999999885 444777777765543 1122222 35666666799999999999999999
Q ss_pred HhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCC-CCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHH
Q 001705 565 LAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKN-GGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECR 643 (1024)
Q Consensus 565 ~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~-Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~ 643 (1024)
.| .++++- .|-..-||-..|+||+.-+. ..-+|-+.. +.-.+|. .|.+.+.+++.+++++++..++|+
T Consensus 281 ~a-----~~iltD----SGgiqEEAp~lg~Pvl~lR~~TERPE~v~a-gt~~lvg-~~~~~i~~~~~~ll~~~~~~~~m~ 349 (383)
T COG0381 281 NA-----FLILTD----SGGIQEEAPSLGKPVLVLRDTTERPEGVEA-GTNILVG-TDEENILDAATELLEDEEFYERMS 349 (383)
T ss_pred hc-----eEEEec----CCchhhhHHhcCCcEEeeccCCCCccceec-CceEEeC-ccHHHHHHHHHHHhhChHHHHHHh
Confidence 99 556552 26678899999999998763 333455543 3446664 488999999999999998877665
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHH
Q 001705 644 KNGLKNIHRFSWPEHCRNYLSHVEH 668 (1024)
Q Consensus 644 ~~~~~~~~~fsw~~~a~~~l~~~~~ 668 (1024)
... ..|.=...++++.+.+..
T Consensus 350 ~~~----npYgdg~as~rIv~~l~~ 370 (383)
T COG0381 350 NAK----NPYGDGNASERIVEILLN 370 (383)
T ss_pred ccc----CCCcCcchHHHHHHHHHH
Confidence 432 244444455555555543
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=98.08 E-value=8e-06 Score=88.73 Aligned_cols=71 Identities=15% Similarity=0.187 Sum_probs=59.2
Q ss_pred EEEEecCCCCCCCchhh---HHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEc
Q 001705 751 VIAADCYDSDGNTTETF---QATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYF 827 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i---~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~ 827 (1024)
+|+||+||||.++++.+ ++.+.++|++|+++ |+.++|+|+++...+...++.+|+. ..|+.+| ++|.....
T Consensus 128 vIvFDLDgTLi~~~~~v~irdPgV~EaL~~Lkek----GikLaIaTS~~Re~v~~~L~~lGLd-~YFdvII-s~Gdv~~~ 201 (301)
T TIGR01684 128 VVVFDLDSTLITDEEPVRIRDPRIYDSLTELKKR----GCILVLWSYGDRDHVVESMRKVKLD-RYFDIII-SGGHKAEE 201 (301)
T ss_pred EEEEecCCCCcCCCCccccCCHHHHHHHHHHHHC----CCEEEEEECCCHHHHHHHHHHcCCC-cccCEEE-ECCccccC
Confidence 77799999988886665 59999999999998 9999999999999999999999996 3456554 46666554
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.00077 Score=76.28 Aligned_cols=66 Identities=29% Similarity=0.314 Sum_probs=49.9
Q ss_pred CHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCC---chhhhccCCcEEEeCCCCHHHHHHHHHHHHh
Q 001705 558 DVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG---PVDILKALNNGLLVDPHDQNAIADALLKLLA 634 (1024)
Q Consensus 558 el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg---~~eii~~~~~Gllv~p~d~~~la~aI~~ll~ 634 (1024)
+...++..| |++|- +-|....||+..|+|.|++..|- .-+.+. +.|++....|++++.+.+.+.+.
T Consensus 241 d~~~Ll~~a----~l~Ig-----~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~--~~Gll~~~~~~~ei~~~v~~~~~ 309 (335)
T PF04007_consen 241 DGLDLLYYA----DLVIG-----GGGTMAREAALLGTPAISCFPGKLLAVDKYLI--EKGLLYHSTDPDEIVEYVRKNLG 309 (335)
T ss_pred CHHHHHHhc----CEEEe-----CCcHHHHHHHHhCCCEEEecCCcchhHHHHHH--HCCCeEecCCHHHHHHHHHHhhh
Confidence 556888888 88883 45788999999999999987653 223333 35889988899999987766544
|
They are found in archaea and some bacteria and have no known function. |
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.0045 Score=73.82 Aligned_cols=94 Identities=14% Similarity=0.069 Sum_probs=60.0
Q ss_pred CCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhhcc-CCcEEEeCC-
Q 001705 546 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----VDILKA-LNNGLLVDP- 619 (1024)
Q Consensus 546 ~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~----~eii~~-~~~Gllv~p- 619 (1024)
+++.+.++.|+.+ ++..++ .++||. -+-..+++||+++|+|+|+-...+= ...+.+ ...|+-+..
T Consensus 323 ~~~~v~~w~pQ~~---iL~h~~--v~~fvt----HgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~ 393 (459)
T PLN02448 323 DMGLVVPWCDQLK---VLCHSS--VGGFWT----HCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKRE 393 (459)
T ss_pred CCEEEeccCCHHH---HhccCc--cceEEe----cCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecc
Confidence 3566778888765 444551 133552 2334688999999999999775442 222322 245776631
Q ss_pred ------CCHHHHHHHHHHHHhCH-HHHHHHHHHHHH
Q 001705 620 ------HDQNAIADALLKLLADK-NMWSECRKNGLK 648 (1024)
Q Consensus 620 ------~d~~~la~aI~~ll~d~-~~~~~~~~~~~~ 648 (1024)
-+.+++++++.+++.++ +..+++++++.+
T Consensus 394 ~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~ 429 (459)
T PLN02448 394 VGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKE 429 (459)
T ss_pred cccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence 36799999999999874 445556555554
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=98.01 E-value=1.3e-05 Score=77.20 Aligned_cols=56 Identities=5% Similarity=0.003 Sum_probs=44.8
Q ss_pred EEEEecCCCCCCCch------hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHH---------------HHHHHHHhcCC
Q 001705 751 VIAADCYDSDGNTTE------TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLG---------------ETMEAIRRCTV 809 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~------~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~---------------~~~~~l~~~~i 809 (1024)
+|++|+||||++.+. .+.+.+++++++++++ |+.|+++|||+.. .+..||...++
T Consensus 3 ~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~----G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~i 78 (126)
T TIGR01689 3 RLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKAL----GFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNV 78 (126)
T ss_pred EEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHC----CCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCC
Confidence 567999999776432 2557888889888877 9999999999876 45678888888
Q ss_pred C
Q 001705 810 N 810 (1024)
Q Consensus 810 ~ 810 (1024)
+
T Consensus 79 p 79 (126)
T TIGR01689 79 P 79 (126)
T ss_pred C
Confidence 6
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.0011 Score=74.08 Aligned_cols=125 Identities=15% Similarity=0.163 Sum_probs=103.7
Q ss_pred cCCCCCEEeCCCCCC-CCHHHHHHHhhcCCcEEEecCCC---CC---CCHHHHHHHHcCCcEEEcCCCCchhhhccCCcE
Q 001705 542 YDLYGQVAYPKHHKQ-SDVPDIYRLAAKTKGVFINPALV---EP---FGLTIIEAAAYGLPVVATKNGGPVDILKALNNG 614 (1024)
Q Consensus 542 ~~l~~~V~~~g~~~~-~el~~ly~~A~~~~dv~v~ps~~---Eg---fgl~llEAmA~G~PVVat~~Gg~~eii~~~~~G 614 (1024)
..+.+++.+.|+.+. ..++..|+.- +++++-+.. ++ +..-+.|+++||.|.+++..-+..-.+..+..-
T Consensus 233 ~~~~~~~~yIg~~~~~~~v~~~~~~~----~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~ 308 (373)
T COG4641 233 RTWEPNVQYIGYYNPKDGVPNAFKRD----DVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDI 308 (373)
T ss_pred ccccchhhhhhccCccchhhhccccc----ceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchhe
Confidence 346678888888887 7888888888 888876442 22 378899999999999999888887777766654
Q ss_pred EEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHhhhc
Q 001705 615 LLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYLSHVEHSRNR 672 (1024)
Q Consensus 615 llv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~~~~ 672 (1024)
++. .|..++.+.+..++..++.++++.+.+.+.+ ..|+.++-+.++++.+.++..+
T Consensus 309 iv~--~d~kdl~~~~~yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~sI~~r 365 (373)
T COG4641 309 IVY--QDSKDLKEKLKYLLNHPDERKEIAECAYERVLARHTYEERIFKLLNEIASINIR 365 (373)
T ss_pred EEe--cCHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHh
Confidence 444 4999999999999999999999999999998 5899999999999999886654
|
|
| >PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5 | Back alignment and domain information |
|---|
Probab=97.97 E-value=1.2e-05 Score=83.58 Aligned_cols=183 Identities=13% Similarity=0.176 Sum_probs=96.4
Q ss_pred HHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHH-hcCCCCCCCCEEEecCCceEEcCCCccccCcchhhhhcccCCchh
Q 001705 772 KNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIR-RCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYEAHVEYRWPGEN 850 (1024)
Q Consensus 772 ~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~-~~~i~~~~~d~lI~~nGa~I~~~~~~~~~d~~~~~~i~~~w~~~~ 850 (1024)
.++|++|++ .+.++++||-.+.-+.+-+. ..-+ ..+|++-+.||...|.. +.......+..++...-..+.
T Consensus 2 ~~~L~~L~~-----~~~vgvVgGsd~~k~~eQl~~~~~~--~~fdy~f~enG~~~y~~-~~~~~~~~~~~~lgee~~~~~ 73 (220)
T PF03332_consen 2 AELLQKLRK-----KVPVGVVGGSDLPKIQEQLGGDDVL--DNFDYVFPENGLVAYKN-GELIWSQSIAEFLGEEKLQKL 73 (220)
T ss_dssp HHHHHHHHT-----TSEEEEEESS-HHHHHHHHSTTTHH--HH-SEEEEGGGTEEEET-TEEEEE--HHHHHHHHHHHHH
T ss_pred HHHHHHHHh-----cCeEEEEcchhHHHHHHHHcccchH--hhCCeeecCCCCeEEEC-CCchhhHhHHHHcCHHHHHHH
Confidence 467788875 68999999999998887774 2112 35899999999999875 322222223333322111111
Q ss_pred HHHHHhhhhhcc-CCCCcccccccCCCCceEEEEE--ecCCCchh------------hHHHHHHHHHhcCCeEEEEE-ec
Q 001705 851 VRSVVPRVARAE-DGAEDDIVGFVDASSSRCQSYS--IKPGAETR------------KVDNIRQRLRMRGFRCNLVY-TR 914 (1024)
Q Consensus 851 v~~~l~~~~~~~-~~~~~~~~~~~~~~~~~k~~~~--~~~~~~~~------------~~~el~~~L~~~~~~~~v~~-s~ 914 (1024)
+...+..+.... +...+..++.... .+.+. -++..... .-+.+.+.|+.....+.+.+ .+
T Consensus 74 in~~l~~~~~l~lp~krGtfIE~R~g----mIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siG 149 (220)
T PF03332_consen 74 INFCLRYISDLDLPVKRGTFIEFRGG----MINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIG 149 (220)
T ss_dssp HHHHHHHHHT---S---S-SEEEESS----EEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEE
T ss_pred HHHHHHHHHhCCCCccCCCceeecCC----cEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecC
Confidence 122222221110 0101112222111 12221 11111000 11234455555544443433 34
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCC----CCCCChHHhhcCC-CceEEec
Q 001705 915 AGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGE----KGDTDYEDLLVGL-HKTLILR 972 (1024)
Q Consensus 915 ~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGD----s~N~D~~~Ml~~a-g~gVaMg 972 (1024)
+.+.+||.|+|.+|..+|++|.+.. .++++.| || ++| | .+.+... -.|+.|.
T Consensus 150 GqiSiDvfp~GwDKty~Lr~l~~~~---~~~I~Ff-GDkt~pGGN-D-yei~~~~rt~g~~V~ 206 (220)
T PF03332_consen 150 GQISIDVFPKGWDKTYCLRHLEDEG---FDEIHFF-GDKTFPGGN-D-YEIFEDPRTIGHTVT 206 (220)
T ss_dssp TTTEEEEEETT-SGGGGGGGTTTTT----SEEEEE-ESS-STTST-T-HHHHHSTTSEEEE-S
T ss_pred CceEEccccCCccHHHHHHHHHhcc---cceEEEE-ehhccCCCC-C-ceeeecCCccEEEeC
Confidence 4469999999999999999997743 5677776 99 789 9 8888765 3588877
|
4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A. |
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00011 Score=81.98 Aligned_cols=108 Identities=19% Similarity=0.305 Sum_probs=74.9
Q ss_pred CHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCch----hhhccC-CcEEEe-C-----C-CCHHHH
Q 001705 558 DVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPV----DILKAL-NNGLLV-D-----P-HDQNAI 625 (1024)
Q Consensus 558 el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~----eii~~~-~~Gllv-~-----p-~d~~~l 625 (1024)
|..++.+-| .+.|+||.+||+|.+..|.-.+|+|-|.|+..|.. |.|++. .-|+.+ | | .+.+++
T Consensus 493 DYeeFVRGC----HLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL 568 (692)
T KOG3742|consen 493 DYEEFVRGC----HLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQL 568 (692)
T ss_pred CHHHHhccc----cccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHH
Confidence 677888888 89999999999999999999999999999977753 444332 246654 2 2 246677
Q ss_pred HHHHHHHHhCHHHHHHHHHHH-HHHH-hcCCHHHHHHHHHHHHHHhh
Q 001705 626 ADALLKLLADKNMWSECRKNG-LKNI-HRFSWPEHCRNYLSHVEHSR 670 (1024)
Q Consensus 626 a~aI~~ll~d~~~~~~~~~~~-~~~~-~~fsw~~~a~~~l~~~~~~~ 670 (1024)
++-|....... .++++-++. -+.. ...+|.....-|.+.=.-.+
T Consensus 569 ~~~m~~F~~qs-RRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~laL 614 (692)
T KOG3742|consen 569 ASFMYEFCKQS-RRQRIIQRNRTERLSDLLDWKYLGRYYRKARHLAL 614 (692)
T ss_pred HHHHHHHHHHH-HHHHHHHhcchhhHHHHHhHHHHhHHHHHHHHHHH
Confidence 77776665433 344443333 3334 47899998888776544333
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00011 Score=85.77 Aligned_cols=185 Identities=15% Similarity=0.129 Sum_probs=118.8
Q ss_pred hHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCC
Q 001705 465 WSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDL 544 (1024)
Q Consensus 465 ~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l 544 (1024)
...+..+..+.+..+++++.++ .|=-+..++++.++ ++..|+-+|++...+.. -...+.+.+.+.|+
T Consensus 273 ~~~R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~I--L~~vP~S~L~L~~~~~~---------~~~~l~~~~~~~Gv 339 (468)
T PF13844_consen 273 VTTRAQYGLPEDAVVFGSFNNL--FKISPETLDLWARI--LKAVPNSRLWLLRFPAS---------GEARLRRRFAAHGV 339 (468)
T ss_dssp EEETGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHH--HHHSTTEEEEEEETSTT---------HHHHHHHHHHHTTS
T ss_pred ccCHHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHH--HHhCCCcEEEEeeCCHH---------HHHHHHHHHHHcCC
Confidence 3445667777777666666665 66678888999888 46667777755433321 12567788888888
Q ss_pred C-CCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCch-----hhhcc-CCcEEEe
Q 001705 545 Y-GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPV-----DILKA-LNNGLLV 617 (1024)
Q Consensus 545 ~-~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~-----eii~~-~~~Gllv 617 (1024)
. +++.|.+..+.++....|+.+ ||++=|..+-| +.+.+||+.+|+|||.-.-.... -++.. |-..++.
T Consensus 340 ~~~Ri~f~~~~~~~ehl~~~~~~----DI~LDT~p~nG-~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA 414 (468)
T PF13844_consen 340 DPDRIIFSPVAPREEHLRRYQLA----DICLDTFPYNG-GTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIA 414 (468)
T ss_dssp -GGGEEEEE---HHHHHHHGGG-----SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-
T ss_pred ChhhEEEcCCCCHHHHHHHhhhC----CEEeeCCCCCC-cHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcC
Confidence 6 578998888888888888888 99997754433 79999999999999986422111 12211 1122334
Q ss_pred CCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-h--cCCHHHHHHHHHHHHHHh
Q 001705 618 DPHDQNAIADALLKLLADKNMWSECRKNGLKNI-H--RFSWPEHCRNYLSHVEHS 669 (1024)
Q Consensus 618 ~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~-~--~fsw~~~a~~~l~~~~~~ 669 (1024)
. |.++..+.-.++.+|++.+++++++.++.. + -|+-..+++.+.+.|+.+
T Consensus 415 ~--s~~eYv~~Av~La~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m 467 (468)
T PF13844_consen 415 D--SEEEYVEIAVRLATDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM 467 (468)
T ss_dssp S--SHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred C--CHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence 3 899999999999999999999999998876 3 799999999999999764
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=97.87 E-value=9.8e-05 Score=82.14 Aligned_cols=66 Identities=12% Similarity=0.009 Sum_probs=48.3
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCC---HHHHHHHHHhcCCCCCCCCEEEecCC
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSS---LGETMEAIRRCTVNIEDFDAIVCNSG 822 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~---~~~~~~~l~~~~i~~~~~d~lI~~nG 822 (1024)
++++|+||||.+.+..+ +.+.++|++|+++ |+.|+++|+|+ .......++.+|++. ..+-+++++-
T Consensus 4 ~~~~D~DGtl~~~~~~~-~ga~e~l~~L~~~----g~~~~~~Tnns~~~~~~~~~~l~~~G~~~-~~~~i~ts~~ 72 (279)
T TIGR01452 4 GFIFDCDGVLWLGERVV-PGAPELLDRLARA----GKAALFVTNNSTKSRAEYALKFARLGFNG-LAEQLFSSAL 72 (279)
T ss_pred EEEEeCCCceEcCCeeC-cCHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHHHHcCCCC-ChhhEecHHH
Confidence 56699999987765444 4589999999987 99999999976 445556678888863 3444555433
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00025 Score=77.32 Aligned_cols=65 Identities=6% Similarity=-0.013 Sum_probs=50.1
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHH---HHHhcCCCCCCCCEEEecC
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETME---AIRRCTVNIEDFDAIVCNS 821 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~---~l~~~~i~~~~~d~lI~~n 821 (1024)
++++|+||||.+.+ .+.+.+.+++++|+++ |+.|+++|+|+...... .|..+|++. ..+-++++.
T Consensus 3 ~v~~DlDGtL~~~~-~~~p~a~~~l~~L~~~----g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~-~~~~i~ts~ 70 (248)
T PRK10444 3 NVICDIDGVLMHDN-VAVPGAAEFLHRILDK----GLPLVLLTNYPSQTGQDLANRFATAGVDV-PDSVFYTSA 70 (248)
T ss_pred EEEEeCCCceEeCC-eeCccHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHHHHcCCCC-CHhhEecHH
Confidence 45699999988775 6778899999999998 99999999998865544 455567763 355566653
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=6.1e-05 Score=82.09 Aligned_cols=72 Identities=14% Similarity=0.159 Sum_probs=58.9
Q ss_pred EEEEecCCCCCCCchhh---HHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEc
Q 001705 751 VIAADCYDSDGNTTETF---QATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYF 827 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i---~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~ 827 (1024)
+|++|+||||.++++.+ ++.+.++|++|+++ |+.++|+|+.+...+...++.+++. ..|+.+|| +|.....
T Consensus 130 ~i~~D~D~TL~~~~~~v~irdp~V~EtL~eLkek----GikLaIvTNg~Re~v~~~Le~lgL~-~yFDvII~-~g~i~~k 203 (303)
T PHA03398 130 VIVFDLDSTLITDEEPVRIRDPFVYDSLDELKER----GCVLVLWSYGNREHVVHSLKETKLE-GYFDIIIC-GGRKAGE 203 (303)
T ss_pred EEEEecCCCccCCCCccccCChhHHHHHHHHHHC----CCEEEEEcCCChHHHHHHHHHcCCC-ccccEEEE-CCCcccc
Confidence 56699999999887776 69999999999998 9999999988888889999999995 34565544 6665554
Q ss_pred C
Q 001705 828 P 828 (1024)
Q Consensus 828 ~ 828 (1024)
.
T Consensus 204 ~ 204 (303)
T PHA03398 204 Y 204 (303)
T ss_pred c
Confidence 3
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=97.75 E-value=8e-05 Score=81.75 Aligned_cols=66 Identities=14% Similarity=0.083 Sum_probs=51.6
Q ss_pred EEEEecCCCCCCCch---hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHH---HHHHHHHhcCCCCCCCCEEEecC
Q 001705 751 VIAADCYDSDGNTTE---TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLG---ETMEAIRRCTVNIEDFDAIVCNS 821 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~---~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~---~~~~~l~~~~i~~~~~d~lI~~n 821 (1024)
++++|+||||.+.+. .+.+.+.++|++|+++ |+.|+++|||+.. .+...+..+|++. .++-++++.
T Consensus 3 ~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~----G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~-~~~~i~ts~ 74 (257)
T TIGR01458 3 GVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGA----SVKVRFVTNTTKESKQDLLERLQRLGFDI-SEDEVFTPA 74 (257)
T ss_pred EEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHC----CCeEEEEECCCCCCHHHHHHHHHHcCCCC-CHHHeEcHH
Confidence 456999999777654 2778999999999998 9999999997655 5777888888863 455566643
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.0013 Score=76.96 Aligned_cols=97 Identities=18% Similarity=0.202 Sum_probs=71.2
Q ss_pred cCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhhccCCcEEEe
Q 001705 542 YDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----VDILKALNNGLLV 617 (1024)
Q Consensus 542 ~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~----~eii~~~~~Gllv 617 (1024)
-++..++....++++. +++..| |++|.. |-..+..||+.+|+|+|+-..+.= .+-++....|..+
T Consensus 280 ~~~p~n~~v~~~~p~~---~~l~~a----d~vI~h----GG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l 348 (406)
T COG1819 280 VNVPDNVIVADYVPQL---ELLPRA----DAVIHH----GGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIAL 348 (406)
T ss_pred ccCCCceEEecCCCHH---HHhhhc----CEEEec----CCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceec
Confidence 3567788888887765 588899 899965 334678899999999999776542 3345556678777
Q ss_pred C--CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Q 001705 618 D--PHDQNAIADALLKLLADKNMWSECRKNGLKNI 650 (1024)
Q Consensus 618 ~--p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~ 650 (1024)
. +.+.+.++++|.++|+|+..++... ...+..
T Consensus 349 ~~~~l~~~~l~~av~~vL~~~~~~~~~~-~~~~~~ 382 (406)
T COG1819 349 PFEELTEERLRAAVNEVLADDSYRRAAE-RLAEEF 382 (406)
T ss_pred CcccCCHHHHHHHHHHHhcCHHHHHHHH-HHHHHh
Confidence 6 6789999999999999987554443 333444
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.17 Score=60.10 Aligned_cols=94 Identities=16% Similarity=0.117 Sum_probs=61.4
Q ss_pred CEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhh-hccCCcEEEeCC--
Q 001705 547 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG----PVDI-LKALNNGLLVDP-- 619 (1024)
Q Consensus 547 ~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg----~~ei-i~~~~~Gllv~p-- 619 (1024)
.+.+.++.||.+ +++.. ..++||. . +--++++||+++|+|+|+-..-+ ...+ +...+.|+.++.
T Consensus 312 g~~v~~W~PQ~~---iL~H~--~v~~Fvt--H--cG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~ 382 (442)
T PLN02208 312 GVVWGGWVQQPL---ILDHP--SIGCFVN--H--CGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREK 382 (442)
T ss_pred CcEeeccCCHHH---HhcCC--ccCeEEc--c--CCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecccc
Confidence 466678888875 55555 1134552 1 22378999999999999976433 2222 233466877754
Q ss_pred ---CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHH
Q 001705 620 ---HDQNAIADALLKLLADK-NMWSECRKNGLKN 649 (1024)
Q Consensus 620 ---~d~~~la~aI~~ll~d~-~~~~~~~~~~~~~ 649 (1024)
-+.++++++|.+++.++ +..+++++++++.
T Consensus 383 ~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~ 416 (442)
T PLN02208 383 TGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKL 416 (442)
T ss_pred CCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 36789999999999865 4556666666554
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.24 Score=59.56 Aligned_cols=140 Identities=13% Similarity=0.147 Sum_probs=76.4
Q ss_pred CCcEEEEEeCCCC--CCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCC
Q 001705 476 HKPTILALSRPDP--KKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKH 553 (1024)
Q Consensus 476 ~~~~Il~vgRld~--~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~ 553 (1024)
+..+.+++|.... .+.+..++++++.+. .++..+++........... +-..+.+.+. ..++...++
T Consensus 285 ~svvyvsfGS~~~~~~~~~~~~~~~l~~~~-----~~flw~~~~~~~~~~~~~~---lp~~~~~r~~----~~g~~v~~w 352 (482)
T PLN03007 285 DSVIYLSFGSVASFKNEQLFEIAAGLEGSG-----QNFIWVVRKNENQGEKEEW---LPEGFEERTK----GKGLIIRGW 352 (482)
T ss_pred CceEEEeecCCcCCCHHHHHHHHHHHHHCC-----CCEEEEEecCCcccchhhc---CCHHHHHHhc----cCCEEEecC
Confidence 4567888887643 345666666666552 2454566642111000000 0011111111 246778889
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhh----h-ccCCcEEEe--------C--
Q 001705 554 HKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDI----L-KALNNGLLV--------D-- 618 (1024)
Q Consensus 554 ~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~ei----i-~~~~~Gllv--------~-- 618 (1024)
+|+. +++..++ .++||.- -| -.+++||+++|+|+|+-...+=... + +...-|+-+ +
T Consensus 353 ~PQ~---~iL~h~~--v~~fvtH---~G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~ 423 (482)
T PLN03007 353 APQV---LILDHQA--TGGFVTH---CG-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGD 423 (482)
T ss_pred CCHH---HHhccCc--cceeeec---Cc-chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccC
Confidence 8875 5666661 1335522 23 3688999999999999764332211 1 111334433 1
Q ss_pred CCCHHHHHHHHHHHHhCH
Q 001705 619 PHDQNAIADALLKLLADK 636 (1024)
Q Consensus 619 p~d~~~la~aI~~ll~d~ 636 (1024)
.-+.++++++|++++.++
T Consensus 424 ~~~~~~l~~av~~~m~~~ 441 (482)
T PLN03007 424 FISREKVEKAVREVIVGE 441 (482)
T ss_pred cccHHHHHHHHHHHhcCc
Confidence 136889999999999875
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.092 Score=62.63 Aligned_cols=184 Identities=13% Similarity=0.117 Sum_probs=99.8
Q ss_pred HHHhhhhCC--CCCcEEEEEeCCC--CCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHH
Q 001705 466 SEVMRFFTN--PHKPTILALSRPD--PKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDK 541 (1024)
Q Consensus 466 ~~~~~~~~~--~~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~ 541 (1024)
....+++.. ++..+.+++|... +..-+..+..+++.+. . .+.-++....... .......-....+.++.
T Consensus 266 ~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~----~-~FlWv~r~~~~~~--~~~~~~lp~~f~~~~~~ 338 (472)
T PLN02670 266 VRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSE----T-PFFWVLRNEPGTT--QNALEMLPDGFEERVKG 338 (472)
T ss_pred HHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCC----C-CEEEEEcCCcccc--cchhhcCChHHHHhccC
Confidence 344455432 3456777788764 2345666777777663 1 3323443211100 00000000111111111
Q ss_pred cCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhhccCCcEEEe
Q 001705 542 YDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG----PVDILKALNNGLLV 617 (1024)
Q Consensus 542 ~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg----~~eii~~~~~Gllv 617 (1024)
. -+.+.++.||.+ ++...+ .++||.- +--.+++||+++|+|+|+-...+ ....+...+.|+.+
T Consensus 339 ---r-G~vv~~W~PQ~~---IL~H~~--v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l 405 (472)
T PLN02670 339 ---R-GMIHVGWVPQVK---ILSHES--VGGFLTH----CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEV 405 (472)
T ss_pred ---C-CeEEeCcCCHHH---HhcCcc--cceeeec----CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEe
Confidence 1 256678888775 454441 1345522 33478999999999999976433 22334445778888
Q ss_pred CC------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH----hcCCHHHHHHHHHHHHHHhh
Q 001705 618 DP------HDQNAIADALLKLLADKNMWSECRKNGLKNI----HRFSWPEHCRNYLSHVEHSR 670 (1024)
Q Consensus 618 ~p------~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~----~~fsw~~~a~~~l~~~~~~~ 670 (1024)
+. -+.++++++|.+++.+++ -.++++++++.. .+=.-.+.++.+.+.+.+..
T Consensus 406 ~~~~~~~~~~~e~i~~av~~vm~~~~-g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~~ 467 (472)
T PLN02670 406 PRDERDGSFTSDSVAESVRLAMVDDA-GEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLRENR 467 (472)
T ss_pred eccccCCcCcHHHHHHHHHHHhcCcc-hHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHhc
Confidence 53 358999999999998752 234455555443 34555666666666666543
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00053 Score=87.86 Aligned_cols=65 Identities=14% Similarity=0.150 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEecc
Q 001705 928 RIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEE 1007 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~ 1007 (1024)
|..+++.+.. ..++++++ ||+.| | .+||+.+|.||+|| |+++..+++|| .+..
T Consensus 701 K~~~i~~l~~----~~~~v~~v-GDg~n-D-~~al~~Agvgia~g----~g~~~a~~~ad----------------~vl~ 753 (834)
T PRK10671 701 KAEAIKRLQS----QGRQVAMV-GDGIN-D-APALAQADVGIAMG----GGSDVAIETAA----------------ITLM 753 (834)
T ss_pred HHHHHHHHhh----cCCEEEEE-eCCHH-H-HHHHHhCCeeEEec----CCCHHHHHhCC----------------EEEe
Confidence 4445555433 24567775 99999 9 99999999999999 99999999999 7777
Q ss_pred ccChhHHHHHHH
Q 001705 1008 SYEPQDLSAALK 1019 (1024)
Q Consensus 1008 ~~~~dgI~~aL~ 1019 (1024)
..+.++|..+++
T Consensus 754 ~~~~~~i~~~i~ 765 (834)
T PRK10671 754 RHSLMGVADALA 765 (834)
T ss_pred cCCHHHHHHHHH
Confidence 888999999986
|
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.013 Score=62.94 Aligned_cols=138 Identities=22% Similarity=0.371 Sum_probs=84.4
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCC
Q 001705 475 PHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHH 554 (1024)
Q Consensus 475 ~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~ 554 (1024)
+-+.+++++|.-|+. |+ .++.+..+. ...-++.+|+|.... -+..+.+.+.+ ++++.++-.
T Consensus 157 ~~r~ilI~lGGsDpk-~l--t~kvl~~L~--~~~~nl~iV~gs~~p----------~l~~l~k~~~~---~~~i~~~~~- 217 (318)
T COG3980 157 PKRDILITLGGSDPK-NL--TLKVLAELE--QKNVNLHIVVGSSNP----------TLKNLRKRAEK---YPNINLYID- 217 (318)
T ss_pred chheEEEEccCCChh-hh--HHHHHHHhh--ccCeeEEEEecCCCc----------chhHHHHHHhh---CCCeeeEec-
Confidence 345588899998884 43 344555553 222578888886543 13444555554 456666555
Q ss_pred CCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCc--E--EEcCCCCchhhhccCCcEEEeCC---CCHHHHHH
Q 001705 555 KQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLP--V--VATKNGGPVDILKALNNGLLVDP---HDQNAIAD 627 (1024)
Q Consensus 555 ~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~P--V--Vat~~Gg~~eii~~~~~Gllv~p---~d~~~la~ 627 (1024)
.+++++++..| |.+|.. -|.++.|+...|+| + ++.+--........ -|+..+- ........
T Consensus 218 -~~dma~LMke~----d~aI~A-----aGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~--lg~~~~l~~~l~~~~~~~ 285 (318)
T COG3980 218 -TNDMAELMKEA----DLAISA-----AGSTLYEALLLGVPSLVLPLAENQIATAKEFEA--LGIIKQLGYHLKDLAKDY 285 (318)
T ss_pred -chhHHHHHHhc----chheec-----cchHHHHHHHhcCCceEEeeeccHHHHHHHHHh--cCchhhccCCCchHHHHH
Confidence 57899999999 888865 38999999999999 3 33332222222221 1222221 23556677
Q ss_pred HHHHHHhCHHHHHHHH
Q 001705 628 ALLKLLADKNMWSECR 643 (1024)
Q Consensus 628 aI~~ll~d~~~~~~~~ 643 (1024)
.+.++.+|+..+....
T Consensus 286 ~~~~i~~d~~~rk~l~ 301 (318)
T COG3980 286 EILQIQKDYARRKNLS 301 (318)
T ss_pred HHHHhhhCHHHhhhhh
Confidence 7777878877655443
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0017 Score=84.47 Aligned_cols=40 Identities=13% Similarity=0.163 Sum_probs=37.2
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
.+-+.++++|+++++. |+.++++|||++..+..+.+++|+
T Consensus 568 plr~~v~~aI~~l~~~----Gi~v~~~TGd~~~ta~~ia~~~gi 607 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSA----GIKVIMVTGDHPITAKAIAKGVGI 607 (997)
T ss_pred CChHHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 4668899999999998 999999999999999999999887
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.6 Score=55.51 Aligned_cols=93 Identities=14% Similarity=0.152 Sum_probs=61.4
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhh-ccCCcEEEeCC---
Q 001705 548 VAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----VDIL-KALNNGLLVDP--- 619 (1024)
Q Consensus 548 V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~----~eii-~~~~~Gllv~p--- 619 (1024)
..+.+++|+.+ ++..+ ..++||.- +--.+++||+++|+|+|+-...+= ...+ +....|+.+..
T Consensus 314 ~vv~~w~PQ~~---vL~h~--~v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~ 384 (446)
T PLN00414 314 IVWEGWVEQPL---ILSHP--SVGCFVNH----CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDS 384 (446)
T ss_pred eEEeccCCHHH---HhcCC--ccceEEec----CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccC
Confidence 44568888765 45444 12456632 334789999999999999764332 2333 34567777742
Q ss_pred --CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHH
Q 001705 620 --HDQNAIADALLKLLADK-NMWSECRKNGLKN 649 (1024)
Q Consensus 620 --~d~~~la~aI~~ll~d~-~~~~~~~~~~~~~ 649 (1024)
-+.+++++++.+++.++ +..+++++++++.
T Consensus 385 ~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~ 417 (446)
T PLN00414 385 GWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKL 417 (446)
T ss_pred CccCHHHHHHHHHHHhcCChhhHHHHHHHHHHH
Confidence 37899999999999864 4556666666654
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0037 Score=63.67 Aligned_cols=146 Identities=19% Similarity=0.273 Sum_probs=80.6
Q ss_pred CCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcC-CChHHHHHHHHccC-C
Q 001705 250 CGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHY-ADAGEVAAHLSGAL-N 327 (1024)
Q Consensus 250 ~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~-~~~~~~a~~l~~~~-~ 327 (1024)
+|+++++..... ......-|+...|-..+++-. ...+++.++...| +.||||.+|. |-. ++.++..+ +
T Consensus 19 ~GV~~~~y~~~~----~~~~~~~~~~~~~e~~~~rg~-av~~a~~~L~~~G--f~PDvI~~H~GWGe---~Lflkdv~P~ 88 (171)
T PF12000_consen 19 PGVRVVRYRPPR----GPTPGTHPYVRDFEAAVLRGQ-AVARAARQLRAQG--FVPDVIIAHPGWGE---TLFLKDVFPD 88 (171)
T ss_pred CCcEEEEeCCCC----CCCCCCCcccccHHHHHHHHH-HHHHHHHHHHHcC--CCCCEEEEcCCcch---hhhHHHhCCC
Confidence 388888877522 233445667777665544433 3344555555554 8999999996 332 23455555 7
Q ss_pred CCEEEEe----CCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHH
Q 001705 328 VPMVLTG----HSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERK 403 (1024)
Q Consensus 328 ipiV~t~----H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~ 403 (1024)
+|++... |.-+.+.. + ...+........++..+-..-...+..||..++.|...... |.....
T Consensus 89 a~li~Y~E~~y~~~g~d~~---F-Dpe~p~~~~~~~~~r~rN~~~l~~l~~~D~~isPT~wQ~~~-------fP~~~r-- 155 (171)
T PF12000_consen 89 APLIGYFEFYYRASGADVG---F-DPEFPPSLDDRARLRMRNAHNLLALEQADAGISPTRWQRSQ-------FPAEFR-- 155 (171)
T ss_pred CcEEEEEEEEecCCCCcCC---C-CCCCCCCHHHHHHHHHHhHHHHHHHHhCCcCcCCCHHHHHh-------CCHHHH--
Confidence 8887533 32222110 0 00111111222221111112345678999999999866553 443322
Q ss_pred HHHhhhcCccccCCCCCcEEEeCCCCCCCCc
Q 001705 404 LRVRRQRGVSCFGRFMPRMVVIPPGMDFSYV 434 (1024)
Q Consensus 404 l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f 434 (1024)
.||.||+-|||++.+
T Consensus 156 ----------------~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 156 ----------------SKISVIHDGIDTDRF 170 (171)
T ss_pred ----------------cCcEEeecccchhhc
Confidence 299999999999765
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.054 Score=59.70 Aligned_cols=166 Identities=13% Similarity=0.071 Sum_probs=110.9
Q ss_pred cEEEEEe-CCCCCCCHHHHHHHHhhccccCCCCcEEEEE--ecCCCcccccccchHHHHHHHHHHHHcCCCCCEE-eCCC
Q 001705 478 PTILALS-RPDPKKNVTTLLKAFGECQPLRELANMTLIL--GNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVA-YPKH 553 (1024)
Q Consensus 478 ~~Il~vg-Rld~~Kgi~~ll~A~~~l~~l~~~~~l~LIv--G~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~-~~g~ 553 (1024)
++.+-+| .-|+.-+....++++.+.. ..++.+++ |-+ .+++.|..++.+...++--.+++. ...+
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~----~~~v~ii~PlsYp-------~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~ 214 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQF----GDNVKIIVPMGYP-------ANNQAYIEEVRQAGLALFGAENFQILTEK 214 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHh----CCCeEEEEECCcC-------CCCHHHHHHHHHHHHHhcCcccEEehhhh
Confidence 4444445 4688888888888887763 24555544 432 356788999999988876544555 5788
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecC-CCCCCCHHHHHHHHcCCcEEEcC-CCCchhhhccCCcEEEeCCCC--HHHHHHHH
Q 001705 554 HKQSDVPDIYRLAAKTKGVFINPA-LVEPFGLTIIEAAAYGLPVVATK-NGGPVDILKALNNGLLVDPHD--QNAIADAL 629 (1024)
Q Consensus 554 ~~~~el~~ly~~A~~~~dv~v~ps-~~Egfgl~llEAmA~G~PVVat~-~Gg~~eii~~~~~Gllv~p~d--~~~la~aI 629 (1024)
++.+|..++++.| |+.++-- +..++|..++ .+..|+||+.+. +.--.++.+.+ --++++..+ ...+.++
T Consensus 215 l~f~eYl~lL~~~----Dl~~f~~~RQQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~e~g-v~Vlf~~d~L~~~~v~e~- 287 (322)
T PRK02797 215 LPFDDYLALLRQC----DLGYFIFARQQGIGTLCL-LIQLGKPVVLSRDNPFWQDLTEQG-LPVLFTGDDLDEDIVREA- 287 (322)
T ss_pred CCHHHHHHHHHhC----CEEEEeechhhHHhHHHH-HHHCCCcEEEecCCchHHHHHhCC-CeEEecCCcccHHHHHHH-
Confidence 9999999999999 8998775 4589998766 688999998875 66667766543 233344322 2222221
Q ss_pred HHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 001705 630 LKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRN 671 (1024)
Q Consensus 630 ~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~ 671 (1024)
.+++...-++.+. |+-+...+.+.++++....
T Consensus 288 ---------~rql~~~dk~~I~-Ff~pn~~~~W~~~l~~~~g 319 (322)
T PRK02797 288 ---------QRQLASVDKNIIA-FFSPNYLQGWRNALAIAAG 319 (322)
T ss_pred ---------HHHHHhhCcceee-ecCHhHHHHHHHHHHHhhC
Confidence 1222222233333 9999999999999886644
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.37 Score=57.38 Aligned_cols=139 Identities=14% Similarity=0.149 Sum_probs=81.5
Q ss_pred CCcEEEEEeCCC---CCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCC
Q 001705 476 HKPTILALSRPD---PKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPK 552 (1024)
Q Consensus 476 ~~~~Il~vgRld---~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g 552 (1024)
+..+.++.|... +.+-+..++.+++.+. . .+..++..+.. +.+. . ...++ ..+++.+.+
T Consensus 273 ~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g----~-~fiW~~~~~~~-~~l~-------~---~~~~~--~~~~~~v~~ 334 (448)
T PLN02562 273 NSVIYISFGSWVSPIGESNVRTLALALEASG----R-PFIWVLNPVWR-EGLP-------P---GYVER--VSKQGKVVS 334 (448)
T ss_pred CceEEEEecccccCCCHHHHHHHHHHHHHCC----C-CEEEEEcCCch-hhCC-------H---HHHHH--hccCEEEEe
Confidence 346778888853 4456777777777763 1 33234432110 0111 0 11111 124667778
Q ss_pred CCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhhc-cCCcEEEeCCCCHHHHHH
Q 001705 553 HHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----VDILK-ALNNGLLVDPHDQNAIAD 627 (1024)
Q Consensus 553 ~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~----~eii~-~~~~Gllv~p~d~~~la~ 627 (1024)
++|+.+ ++..++ .++||. -+--.+.+||+.+|+|+|+-...+= ...+. ....|+-+..-+.+++++
T Consensus 335 w~PQ~~---iL~h~~--v~~fvt----H~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~l~~ 405 (448)
T PLN02562 335 WAPQLE---VLKHQA--VGCYLT----HCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQKEVEE 405 (448)
T ss_pred cCCHHH---HhCCCc--cceEEe----cCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCCHHHHHH
Confidence 888764 555541 134552 2334789999999999998764332 22332 235677775568899999
Q ss_pred HHHHHHhCHHHHHH
Q 001705 628 ALLKLLADKNMWSE 641 (1024)
Q Consensus 628 aI~~ll~d~~~~~~ 641 (1024)
+|++++.+++.+++
T Consensus 406 ~v~~~l~~~~~r~~ 419 (448)
T PLN02562 406 GLRKVMEDSGMGER 419 (448)
T ss_pred HHHHHhCCHHHHHH
Confidence 99999988654443
|
|
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.75 Score=54.25 Aligned_cols=89 Identities=11% Similarity=0.154 Sum_probs=57.2
Q ss_pred CCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCC-CCchhhhccC-CcEEEeCC--CCHHHHH
Q 001705 551 PKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKN-GGPVDILKAL-NNGLLVDP--HDQNAIA 626 (1024)
Q Consensus 551 ~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~-Gg~~eii~~~-~~Gllv~p--~d~~~la 626 (1024)
....+..++..++..| |++|-.-+ -.++=|++.|+|+|+-.. .-...++... ...++++. -+.+++.
T Consensus 313 ~~~~~~~e~~~iIs~~----dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~~~~~~~~~l~~~~Li 383 (426)
T PRK10017 313 MDELNDLEMGKILGAC----ELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQ 383 (426)
T ss_pred cCCCChHHHHHHHhhC----CEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHcCCccEEechhhCCHHHHH
Confidence 3444556888999999 89885433 357779999999998653 2222333222 22344443 3577899
Q ss_pred HHHHHHHhCHHHHHHHHHHHHH
Q 001705 627 DALLKLLADKNMWSECRKNGLK 648 (1024)
Q Consensus 627 ~aI~~ll~d~~~~~~~~~~~~~ 648 (1024)
+.+.+++++.+..++.-+....
T Consensus 384 ~~v~~~~~~r~~~~~~l~~~v~ 405 (426)
T PRK10017 384 AMVADTLGQLPALNARLAEAVS 405 (426)
T ss_pred HHHHHHHhCHHHHHHHHHHHHH
Confidence 9999999987765544433333
|
|
| >PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.023 Score=62.61 Aligned_cols=85 Identities=18% Similarity=0.190 Sum_probs=55.8
Q ss_pred CcceEEEEcCC-ChHHHHHHHHccCCCCEEEEeCCCc-hhhhHHHHhcCCC--Ccchh-hHHHHHHHHHHHHHhhhcCCE
Q 001705 303 TWPYVIHGHYA-DAGEVAAHLSGALNVPMVLTGHSLG-RNKFEQLLKQGRL--PKDIN-ASYKIMRRIEAEELGLDASEM 377 (1024)
Q Consensus 303 ~~pDvIh~h~~-~~~~~a~~l~~~~~ipiV~t~H~l~-~~~~~~l~~~g~~--~~~i~-~~y~~~r~i~~e~~~l~~Ad~ 377 (1024)
-+.||+|+... .+++++++++...|+|+++|=|+.. ++....+...... ..... ...++++.+ =+.+++.||.
T Consensus 171 P~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l--~~~~Y~~Ad~ 248 (268)
T PF11997_consen 171 PKADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESL--SRLAYRAADR 248 (268)
T ss_pred CCCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHH--HHHHHHhhCe
Confidence 36799998765 6788999999999999999999974 3443444443333 11111 112233332 3567999999
Q ss_pred EEeCCHHHHHHH
Q 001705 378 VVTSTRQEIEMQ 389 (1024)
Q Consensus 378 Vi~~S~~~~~~~ 389 (1024)
|++..+...+.|
T Consensus 249 I~~l~~~n~~~q 260 (268)
T PF11997_consen 249 ITPLYEYNREWQ 260 (268)
T ss_pred ecccchhhHHHH
Confidence 999987655443
|
It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY. |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.034 Score=64.02 Aligned_cols=145 Identities=19% Similarity=0.280 Sum_probs=89.7
Q ss_pred CCCCCcEEEEE-e-CCCC-CCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEE
Q 001705 473 TNPHKPTILAL-S-RPDP-KKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVA 549 (1024)
Q Consensus 473 ~~~~~~~Il~v-g-Rld~-~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~ 549 (1024)
.++++++|..+ | |-.. ++.++.+++++..+. ...|++.+++...+. .....+.......+..-.+.
T Consensus 180 l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~--~~~p~l~fvvp~a~~---------~~~~~i~~~~~~~~~~~~~~ 248 (373)
T PF02684_consen 180 LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLK--KQRPDLQFVVPVAPE---------VHEELIEEILAEYPPDVSIV 248 (373)
T ss_pred CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHH--HhCCCeEEEEecCCH---------HHHHHHHHHHHhhCCCCeEE
Confidence 45666655443 3 4433 456688999999995 466888887754432 11122334444444322333
Q ss_pred eCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcC-CCCchh----------------hhccCC
Q 001705 550 YPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATK-NGGPVD----------------ILKALN 612 (1024)
Q Consensus 550 ~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~-~Gg~~e----------------ii~~~~ 612 (1024)
.. ..+-.+.++.| |+.+..| |.+-+|++.+|+|+|..- .+...- |+.+..
T Consensus 249 ~~----~~~~~~~m~~a----d~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~ 315 (373)
T PF02684_consen 249 II----EGESYDAMAAA----DAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGRE 315 (373)
T ss_pred Ec----CCchHHHHHhC----cchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCC
Confidence 22 34678899999 8988776 999999999999998753 333222 211100
Q ss_pred --cEEEeCCCCHHHHHHHHHHHHhCHHHHHH
Q 001705 613 --NGLLVDPHDQNAIADALLKLLADKNMWSE 641 (1024)
Q Consensus 613 --~Gllv~p~d~~~la~aI~~ll~d~~~~~~ 641 (1024)
.-++-+.-+++.+++++..++.|++.++.
T Consensus 316 v~PEliQ~~~~~~~i~~~~~~ll~~~~~~~~ 346 (373)
T PF02684_consen 316 VVPELIQEDATPENIAAELLELLENPEKRKK 346 (373)
T ss_pred cchhhhcccCCHHHHHHHHHHHhcCHHHHHH
Confidence 01222345799999999999999876443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.049 Score=59.50 Aligned_cols=136 Identities=18% Similarity=0.262 Sum_probs=78.3
Q ss_pred HHhhhhCCCCCcEEEE------EeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHH
Q 001705 467 EVMRFFTNPHKPTILA------LSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLID 540 (1024)
Q Consensus 467 ~~~~~~~~~~~~~Il~------vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~ 540 (1024)
.++++....+.++|+. ..-....+++..+.++++++.+ .+ +|+-.++. ...+.+.
T Consensus 172 vlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k---~g---iV~ipr~~-------------~~~eife 232 (346)
T COG1817 172 VLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKK---YG---IVLIPREK-------------EQAEIFE 232 (346)
T ss_pred HHHHcCCCCCCceEEEeeccccceeeccccchhhHHHHHHHHHh---Cc---EEEecCch-------------hHHHHHh
Confidence 3445555565666654 1112346778778888888742 23 33333332 1123344
Q ss_pred HcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCC---CchhhhccCCcEEEe
Q 001705 541 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNG---GPVDILKALNNGLLV 617 (1024)
Q Consensus 541 ~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~G---g~~eii~~~~~Gllv 617 (1024)
.+. ++..+... .+.+.-+|.+. +++ .+-|.-.-||++.|+|.|++..| +..+... +.|+++
T Consensus 233 ~~~---n~i~pk~~-vD~l~Llyya~-----lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~~ 296 (346)
T COG1817 233 GYR---NIIIPKKA-VDTLSLLYYAT-----LVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLLY 296 (346)
T ss_pred hhc---cccCCccc-ccHHHHHhhhh-----eee-----cCCchHHHHHHHhCCceEEecCCccccccHHHH--hcCcee
Confidence 432 33333221 22244444443 544 34577889999999999999865 3333332 469999
Q ss_pred CCCCHHHHHHHHHHHHhCHH
Q 001705 618 DPHDQNAIADALLKLLADKN 637 (1024)
Q Consensus 618 ~p~d~~~la~aI~~ll~d~~ 637 (1024)
+..|+.++.+...+++.++.
T Consensus 297 ~s~~~~~~~~~a~~~l~~~~ 316 (346)
T COG1817 297 HSTDEIAIVEYAVRNLKYRR 316 (346)
T ss_pred ecCCHHHHHHHHHHHhhchh
Confidence 98898877777777776654
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.98 Score=53.79 Aligned_cols=93 Identities=19% Similarity=0.320 Sum_probs=58.3
Q ss_pred CCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhhccC-CcEEEeC-C
Q 001705 546 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----VDILKAL-NNGLLVD-P 619 (1024)
Q Consensus 546 ~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~----~eii~~~-~~Gllv~-p 619 (1024)
++....+++|+.+ ++... ..++||.- -|+ .+++||+++|+|+|+-...+= ...+.+. +.|+-+. .
T Consensus 324 ~~g~v~~w~PQ~~---iL~h~--~v~~fvtH---~G~-nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~ 394 (451)
T PLN02410 324 GRGYIVKWAPQKE---VLSHP--AVGGFWSH---CGW-NSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGD 394 (451)
T ss_pred CCeEEEccCCHHH---HhCCC--ccCeeeec---Cch-hHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCc
Confidence 4555668888875 55553 11456632 233 588999999999999764332 2222222 5677663 3
Q ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 001705 620 HDQNAIADALLKLLADKNMWSECRKNGLK 648 (1024)
Q Consensus 620 ~d~~~la~aI~~ll~d~~~~~~~~~~~~~ 648 (1024)
-+.++++++|++++.+++ .+++++++++
T Consensus 395 ~~~~~v~~av~~lm~~~~-~~~~r~~a~~ 422 (451)
T PLN02410 395 LDRGAVERAVKRLMVEEE-GEEMRKRAIS 422 (451)
T ss_pred ccHHHHHHHHHHHHcCCc-HHHHHHHHHH
Confidence 478899999999998754 3344444443
|
|
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.31 Score=54.41 Aligned_cols=335 Identities=17% Similarity=0.178 Sum_probs=168.1
Q ss_pred ceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcC--CCceEEEEEecCCCCCCCCcccCCCccccCCCCCC
Q 001705 169 NLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANT--EGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDG 246 (1024)
Q Consensus 169 ~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~--g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~ 246 (1024)
.|||+|-|.|. +|- |.-+....+|++|.+. | .+|.++|....-+..
T Consensus 9 ~~Ri~~Yshd~--------~Gl-----GHlrR~~~Ia~aLv~d~~~--~~Il~IsG~~~~~~F----------------- 56 (400)
T COG4671 9 RPRILFYSHDL--------LGL-----GHLRRALRIAHALVEDYLG--FDILIISGGPPAGGF----------------- 56 (400)
T ss_pred cceEEEEehhh--------ccc-----hHHHHHHHHHHHHhhcccC--ceEEEEeCCCccCCC-----------------
Confidence 46999999663 443 7888899999999998 8 999999987432221
Q ss_pred CCCCCeEEEEecCCCC---CCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHH-----
Q 001705 247 TGSCGAYIIRIPCGAR---DKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEV----- 318 (1024)
Q Consensus 247 ~~~~gv~i~rip~~~~---~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~----- 318 (1024)
....|+..+.+|+-.+ ..|-.... -..+++|...--..+. ..+. .++||++.+.....|..
T Consensus 57 ~~~~gVd~V~LPsl~k~~~G~~~~~d~-~~~l~e~~~~Rs~lil---~t~~-------~fkPDi~IVd~~P~Glr~EL~p 125 (400)
T COG4671 57 PGPAGVDFVKLPSLIKGDNGEYGLVDL-DGDLEETKKLRSQLIL---STAE-------TFKPDIFIVDKFPFGLRFELLP 125 (400)
T ss_pred CCcccCceEecCceEecCCCceeeeec-CCCHHHHHHHHHHHHH---HHHH-------hcCCCEEEEeccccchhhhhhH
Confidence 1124888899987322 11212211 1123444332222221 1222 27899999987654422
Q ss_pred -HHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcc
Q 001705 319 -AAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFD 397 (1024)
Q Consensus 319 -a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~ 397 (1024)
...++. .+.+.|.-+.++ ++.... ... -.++-..++.+-+.-|.|.++..-.......-|+ |.
T Consensus 126 tL~yl~~-~~t~~vL~lr~i-~D~p~~---~~~----------~w~~~~~~~~I~r~yD~V~v~GdP~f~d~~~~~~-~~ 189 (400)
T COG4671 126 TLEYLKT-TGTRLVLGLRSI-RDIPQE---LEA----------DWRRAETVRLINRFYDLVLVYGDPDFYDPLTEFP-FA 189 (400)
T ss_pred HHHHHhh-cCCcceeehHhh-hhchhh---hcc----------chhhhHHHHHHHHhheEEEEecCccccChhhcCC-cc
Confidence 122222 234555555443 111000 000 0122222344556788898876543322222222 11
Q ss_pred hHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCC
Q 001705 398 LKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHK 477 (1024)
Q Consensus 398 ~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 477 (1024)
+.+ +-.+.+-|.= .+-.+.. +.|.-+ .+...
T Consensus 190 ~~i--------------------~~k~~ytG~v-q~~~~~~---------------------~~p~~~-------~pE~~ 220 (400)
T COG4671 190 PAI--------------------RAKMRYTGFV-QRSLPHL---------------------PLPPHE-------APEGF 220 (400)
T ss_pred Hhh--------------------hhheeEeEEe-eccCcCC---------------------CCCCcC-------CCccc
Confidence 211 2223333321 0000100 001100 02345
Q ss_pred cEEEEEeCC-CCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCC
Q 001705 478 PTILALSRP-DPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQ 556 (1024)
Q Consensus 478 ~~Il~vgRl-d~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~ 556 (1024)
.+++.+|.- +...=+...+.|...+..+. .+..+|.|.- |. ....+++.. ...-.++|.+..+ .
T Consensus 221 ~Ilvs~GGG~dG~eLi~~~l~A~~~l~~l~--~~~~ivtGP~-----MP---~~~r~~l~~---~A~~~p~i~I~~f--~ 285 (400)
T COG4671 221 DILVSVGGGADGAELIETALAAAQLLAGLN--HKWLIVTGPF-----MP---EAQRQKLLA---SAPKRPHISIFEF--R 285 (400)
T ss_pred eEEEecCCChhhHHHHHHHHHHhhhCCCCC--cceEEEeCCC-----CC---HHHHHHHHH---hcccCCCeEEEEh--h
Confidence 567777763 22333444555555543322 1244455532 21 223344443 3333467888777 7
Q ss_pred CCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchh--hhccC---CcEE--EeCCC--CHHHHHH
Q 001705 557 SDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVD--ILKAL---NNGL--LVDPH--DQNAIAD 627 (1024)
Q Consensus 557 ~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~e--ii~~~---~~Gl--lv~p~--d~~~la~ 627 (1024)
+++..|+..| +..|.- -|+ +|..|-+.+|+|-+.-..+.+.+ +++.. .-|+ ++.|. .++.+|+
T Consensus 286 ~~~~~ll~gA----~~vVSm---~GY-NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~ 357 (400)
T COG4671 286 NDFESLLAGA----RLVVSM---GGY-NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLAD 357 (400)
T ss_pred hhHHHHHHhh----heeeec---ccc-hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHH
Confidence 8999999999 676632 244 56779999999988876555443 22211 1122 22233 3677777
Q ss_pred HHHHHHh
Q 001705 628 ALLKLLA 634 (1024)
Q Consensus 628 aI~~ll~ 634 (1024)
+|..++.
T Consensus 358 al~~~l~ 364 (400)
T COG4671 358 ALKAALA 364 (400)
T ss_pred HHHhccc
Confidence 7777766
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0046 Score=67.00 Aligned_cols=68 Identities=10% Similarity=-0.001 Sum_probs=54.2
Q ss_pred EEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEEC---CCCHHHHHHHHHh-cCCCCCCCCEEEecCCceEE
Q 001705 753 AADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVT---GSSLGETMEAIRR-CTVNIEDFDAIVCNSGSELY 826 (1024)
Q Consensus 753 a~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaT---GR~~~~~~~~l~~-~~i~~~~~d~lI~~nGa~I~ 826 (1024)
.||+||||.+.+..+ +.+.++|+.++++ |+.+++.| ||+...+.+.|.. ++++ ..++-+|++..+...
T Consensus 2 lfD~DGvL~~~~~~~-~~a~e~i~~l~~~----g~~~~~~tN~~~~~~~~~~~~l~~~~g~~-~~~~~iits~~~~~~ 73 (236)
T TIGR01460 2 LFDIDGVLWLGHKPI-PGAAEALNRLRAK----GKPVVFLTNNSSRSEEDYAEKLSSLLGVD-VSPDQIITSGSVTKD 73 (236)
T ss_pred EEeCcCccCcCCccC-cCHHHHHHHHHHC----CCeEEEEECCCCCCHHHHHHHHHHhcCCC-CCHHHeeeHHHHHHH
Confidence 489999988875544 4888999999987 89999998 9999999998888 7886 356677776555443
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.061 Score=60.92 Aligned_cols=153 Identities=13% Similarity=0.134 Sum_probs=90.0
Q ss_pred HhhhhCCCCCcEEE-EEeC-CC-CCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHH-HHHHcC
Q 001705 468 VMRFFTNPHKPTIL-ALSR-PD-PKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLK-LIDKYD 543 (1024)
Q Consensus 468 ~~~~~~~~~~~~Il-~vgR-ld-~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~-~i~~~~ 543 (1024)
+.++..+.+.++|. ..|. -. -.+....+++|+.++. ...|++.+++-.... ...++.. ..+...
T Consensus 179 r~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~--~~~~~~~~vlp~~~~----------~~~~~~~~~~~~~~ 246 (381)
T COG0763 179 REKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELK--ARYPDLKFVLPLVNA----------KYRRIIEEALKWEV 246 (381)
T ss_pred HHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHH--hhCCCceEEEecCcH----------HHHHHHHHHhhccc
Confidence 34444555555443 3443 22 2456778888888885 466888887754331 1122222 222222
Q ss_pred CCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcC-CCC----------------chh
Q 001705 544 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATK-NGG----------------PVD 606 (1024)
Q Consensus 544 l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~-~Gg----------------~~e 606 (1024)
....+. +...+-...+..| |+.+..| |.+.+|+|.+|+|+|++- ... ++.
T Consensus 247 ~~~~~~----~~~~~~~~a~~~a----D~al~aS-----GT~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpN 313 (381)
T COG0763 247 AGLSLI----LIDGEKRKAFAAA----DAALAAS-----GTATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPN 313 (381)
T ss_pred cCceEE----ecCchHHHHHHHh----hHHHHhc-----cHHHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchH
Confidence 111222 2345778899999 8988765 999999999999998763 322 223
Q ss_pred hhccCCcEEEe-----CCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 001705 607 ILKALNNGLLV-----DPHDQNAIADALLKLLADKNMWSECRKNGLK 648 (1024)
Q Consensus 607 ii~~~~~Gllv-----~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~ 648 (1024)
|+.+ -.+| ..-.++.++.++..++.|+..++++.+...+
T Consensus 314 Ii~~---~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~ 357 (381)
T COG0763 314 ILAG---REIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRE 357 (381)
T ss_pred HhcC---CccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHH
Confidence 3221 1112 1235889999999999998655555444433
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.003 Score=77.68 Aligned_cols=59 Identities=14% Similarity=0.119 Sum_probs=45.3
Q ss_pred ccceeEEEEEecCCCCC---CCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 745 RRQMLIVIAADCYDSDG---NTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 745 ~~~rlllIa~DlDGTl~---~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
...+.+.++.| +++. .-...+-+..+++++++++. |+++++.||-+...+..+.+++|+
T Consensus 424 ~G~r~l~va~~--~~~lG~i~l~D~~Rp~a~eaI~~l~~~----Gi~v~miTGD~~~ta~~iA~~lGI 485 (675)
T TIGR01497 424 QGGTPLVVCED--NRIYGVIYLKDIVKGGIKERFAQLRKM----GIKTIMITGDNRLTAAAIAAEAGV 485 (675)
T ss_pred CCCeEEEEEEC--CEEEEEEEecccchhHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCC
Confidence 33456666665 4411 11234678999999999998 999999999999999999999887
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0038 Score=80.72 Aligned_cols=147 Identities=16% Similarity=0.241 Sum_probs=92.5
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCCccccCcchhhhhccc
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYEAHVEYR 845 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~~~~~d~~~~~~i~~~ 845 (1024)
.+-+.+.++|+++++. |++++++||.+...+..+.+++|+.. . +..+... .
T Consensus 537 plr~~v~e~I~~l~~a----GI~v~miTGD~~~tA~~ia~~~gi~~--~-------~~~v~~~----------------~ 587 (917)
T TIGR01116 537 PPRPEVADAIEKCRTA----GIRVIMITGDNKETAEAICRRIGIFS--P-------DEDVTFK----------------S 587 (917)
T ss_pred CCchhHHHHHHHHHHC----CCEEEEecCCCHHHHHHHHHHcCCCC--C-------Cccccce----------------e
Confidence 4568889999999987 99999999999999999999988831 1 1100000 0
Q ss_pred CCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCC
Q 001705 846 WPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSF 925 (1024)
Q Consensus 846 w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~g 925 (1024)
.....+ ..+ .+ +++.+... ++ ++ +-.+.|.
T Consensus 588 ~~g~~l----~~~---------------------------~~-------~~~~~~~~----~~-~v------~ar~~P~- 617 (917)
T TIGR01116 588 FTGREF----DEM---------------------------GP-------AKQRAACR----SA-VL------FSRVEPS- 617 (917)
T ss_pred eeHHHH----hhC---------------------------CH-------HHHHHhhh----cC-eE------EEecCHH-
Confidence 000000 000 00 01111111 11 12 2233343
Q ss_pred CCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEe
Q 001705 926 ASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYI 1005 (1024)
Q Consensus 926 asKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~v 1005 (1024)
.|...++.+.+ ..++++++||+.| | .+||+.|+.||+|+ +|.+..+++|| ++
T Consensus 618 -~K~~iV~~lq~-----~g~~va~iGDG~N-D-~~alk~AdVGia~g----~g~~~ak~aAD----------------~v 669 (917)
T TIGR01116 618 -HKSELVELLQE-----QGEIVAMTGDGVN-D-APALKKADIGIAMG----SGTEVAKEASD----------------MV 669 (917)
T ss_pred -HHHHHHHHHHh-----cCCeEEEecCCcc-h-HHHHHhCCeeEECC----CCcHHHHHhcC----------------eE
Confidence 47777776542 2346666799999 9 99999999999999 99988899999 66
Q ss_pred ccccChhHHHHHHH
Q 001705 1006 EESYEPQDLSAALK 1019 (1024)
Q Consensus 1006 t~~~~~dgI~~aL~ 1019 (1024)
..+.+=..|..+++
T Consensus 670 l~dd~f~~i~~~i~ 683 (917)
T TIGR01116 670 LADDNFATIVAAVE 683 (917)
T ss_pred EccCCHHHHHHHHH
Confidence 55544455666653
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0057 Score=67.79 Aligned_cols=48 Identities=17% Similarity=0.145 Sum_probs=40.8
Q ss_pred ecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCc-eEEec
Q 001705 922 VPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHK-TLILR 972 (1024)
Q Consensus 922 ~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~-gVaMg 972 (1024)
++..-.+...+.++++++|++++++++| ||+.+ | ++|-+.+|. ++.+.
T Consensus 153 ~~~~Kp~p~~~~~~~~~~g~~~~~~l~I-GD~~~-D-i~aA~~aGi~~i~v~ 201 (272)
T PRK13223 153 LPQKKPDPAALLFVMKMAGVPPSQSLFV-GDSRS-D-VLAAKAAGVQCVALS 201 (272)
T ss_pred CCCCCCCcHHHHHHHHHhCCChhHEEEE-CCCHH-H-HHHHHHCCCeEEEEe
Confidence 3445567789999999999999999996 99999 9 999999997 45555
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=96.96 E-value=1.4 Score=52.67 Aligned_cols=81 Identities=19% Similarity=0.220 Sum_probs=54.7
Q ss_pred CEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhh-ccCCcEEEeCC--
Q 001705 547 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----VDIL-KALNNGLLVDP-- 619 (1024)
Q Consensus 547 ~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~----~eii-~~~~~Gllv~p-- 619 (1024)
.+.+.+++|+.+ ++...+ .+.||. -+-..+++||+.+|+|+|+-...+= ...+ ...+.|+.++.
T Consensus 339 g~vv~~W~PQ~~---iL~h~~--vg~Fit----H~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~ 409 (481)
T PLN02992 339 GFVVPSWAPQAE---ILAHQA--VGGFLT----HCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPK 409 (481)
T ss_pred CEEEeecCCHHH---HhCCcc--cCeeEe----cCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCC
Confidence 477788988775 455541 134552 2334689999999999999775432 2233 34566877753
Q ss_pred --CCHHHHHHHHHHHHhCH
Q 001705 620 --HDQNAIADALLKLLADK 636 (1024)
Q Consensus 620 --~d~~~la~aI~~ll~d~ 636 (1024)
-+.++++++|.+++.++
T Consensus 410 ~~~~~~~l~~av~~vm~~~ 428 (481)
T PLN02992 410 EVISRSKIEALVRKVMVEE 428 (481)
T ss_pred CcccHHHHHHHHHHHhcCC
Confidence 36889999999999763
|
|
| >PF09210 DUF1957: Domain of unknown function (DUF1957); InterPro: IPR015293 This C-terminal domain is found in a set of hypothetical bacterial proteins that have a N-terminal domain related to the glycoside hydrolase family 57 family GH57 from CAZY | Back alignment and domain information |
|---|
Probab=96.95 E-value=4.4e-05 Score=70.51 Aligned_cols=79 Identities=20% Similarity=0.141 Sum_probs=56.9
Q ss_pred chhhhhhhhhhhhHHHHHHhhhhh---hhchHHHHHHHHHHHHHHhcCccccccccccCccccccCCCCCcccccCcccc
Q 001705 76 NTRERSNRLENMCWRIWHLARKKK---QIAWEDAQRLAKRRLEREQGRNDAADDLSELSEGEKEKGDSINASESLKEIPR 152 (1024)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (1024)
++.+=..|+=|.+.|=+=||---- -|..+++++||++|++.|+.||..+.++ |..|+.+.+.|.++|..++.||.
T Consensus 19 ~~~~l~~R~LnQaaRElLLaqSSDW~Fii~~gta~~YA~~R~~~Hl~rF~~L~~~--l~~~~id~~~L~~~E~~d~iFp~ 96 (102)
T PF09210_consen 19 DADGLRERALNQAARELLLAQSSDWAFIITTGTAVEYARERFKEHLNRFWRLYDM--LESGRIDEEWLEELEEKDNIFPD 96 (102)
T ss_dssp TSSHCHHHHHHHHHHHHHHHCBTHHHHCCCCTTTHHHHHHHHHHHHHHHHHHHHH--HHHS---HHHHHHHHHHS---TT
T ss_pred CcchHHHHHHHHHHHHHHHHHhCccHHHHcCCChHHHHHHHHHHHHHHHHHHHHH--HHcCCcCHHHHHHHHHHcCCCcc
Confidence 344555677777777766653221 1677899999999999999999999999 88999988889999999999999
Q ss_pred cccc
Q 001705 153 INSD 156 (1024)
Q Consensus 153 ~~~~ 156 (1024)
||++
T Consensus 97 idyr 100 (102)
T PF09210_consen 97 IDYR 100 (102)
T ss_dssp --GG
T ss_pred cCCC
Confidence 9986
|
The exact function of this domain has not, as yet, been defined. ; PDB: 3N98_A 3N8T_A 3N92_A 1UFA_A 3P0B_A. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0035 Score=76.75 Aligned_cols=53 Identities=17% Similarity=0.256 Sum_probs=45.0
Q ss_pred CCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHH
Q 001705 944 SKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALK 1019 (1024)
Q Consensus 944 ~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~ 1019 (1024)
+++++ +||+.| | .+|++.+|.||+|| ++.+..+..|| ++..+.+-++|..+++
T Consensus 448 ~~v~~-vGDg~n-D-~~al~~A~vgia~g----~~~~~~~~~Ad----------------~vi~~~~~~~l~~~i~ 500 (556)
T TIGR01525 448 GVVAM-VGDGIN-D-APALAAADVGIAMG----AGSDVAIEAAD----------------IVLLNDDLSSLPTAID 500 (556)
T ss_pred CEEEE-EECChh-H-HHHHhhCCEeEEeC----CCCHHHHHhCC----------------EEEeCCCHHHHHHHHH
Confidence 46766 599999 9 99999999999999 88888888999 7767777888887764
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.11 Score=58.12 Aligned_cols=163 Identities=15% Similarity=0.136 Sum_probs=106.2
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEE--ecCCCcccccccchHHHHHHHHHHHHcCCCCCEEe-CCC
Q 001705 477 KPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLIL--GNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAY-PKH 553 (1024)
Q Consensus 477 ~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIv--G~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~-~g~ 553 (1024)
+..|+.--.-|+.-+....++++.... . .+..+++ |-+. ++++|..++.+...++--.+++.. ..+
T Consensus 185 ~ltILvGNSgd~sNnHieaL~~L~~~~--~--~~~kIivPLsYg~-------~n~~Yi~~V~~~~~~lF~~~~~~iL~e~ 253 (360)
T PF07429_consen 185 KLTILVGNSGDPSNNHIEALEALKQQF--G--DDVKIIVPLSYGA-------NNQAYIQQVIQAGKELFGAENFQILTEF 253 (360)
T ss_pred ceEEEEcCCCCCCccHHHHHHHHHHhc--C--CCeEEEEECCCCC-------chHHHHHHHHHHHHHhcCccceeEhhhh
Confidence 444555445788888888888887652 2 3455544 5442 356788999998888755556654 679
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCC-CCCCCHHHHHHHHcCCcEEEcCCCCc-hhhhccCCcEEEe--CCCCHHHHHHHH
Q 001705 554 HKQSDVPDIYRLAAKTKGVFINPAL-VEPFGLTIIEAAAYGLPVVATKNGGP-VDILKALNNGLLV--DPHDQNAIADAL 629 (1024)
Q Consensus 554 ~~~~el~~ly~~A~~~~dv~v~ps~-~Egfgl~llEAmA~G~PVVat~~Gg~-~eii~~~~~Gllv--~p~d~~~la~aI 629 (1024)
++.+|..++++.| |+.++... ..++|..++ .+.+|+||+.+..... .++.+. .--+++ |.-|...+++|=
T Consensus 254 mpf~eYl~lL~~c----Dl~if~~~RQQgiGnI~l-Ll~~G~~v~L~~~np~~~~l~~~-~ipVlf~~d~L~~~~v~ea~ 327 (360)
T PF07429_consen 254 MPFDEYLALLSRC----DLGIFNHNRQQGIGNICL-LLQLGKKVFLSRDNPFWQDLKEQ-GIPVLFYGDELDEALVREAQ 327 (360)
T ss_pred CCHHHHHHHHHhC----CEEEEeechhhhHhHHHH-HHHcCCeEEEecCChHHHHHHhC-CCeEEeccccCCHHHHHHHH
Confidence 9999999999999 99999875 489987665 7899999998875444 455433 222333 333455555555
Q ss_pred HHHHh-CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 001705 630 LKLLA-DKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEH 668 (1024)
Q Consensus 630 ~~ll~-d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~ 668 (1024)
+++.. |++ . -.|.-+...+.+.+.+.-
T Consensus 328 rql~~~dk~-----------~-iaFf~pny~~~w~~~l~~ 355 (360)
T PF07429_consen 328 RQLANVDKQ-----------Q-IAFFAPNYLQGWRQALRL 355 (360)
T ss_pred HHHhhCccc-----------c-eeeeCCchHHHHHHHHHH
Confidence 44433 211 1 135556666666666653
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PF08550 DUF1752: Fungal protein of unknown function (DUF1752); InterPro: IPR013860 This entry represents fungal proteins of unknown function | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.00041 Score=48.54 Aligned_cols=25 Identities=28% Similarity=0.752 Sum_probs=18.4
Q ss_pred HHHhcchhhhhhhhhhhhHHHHHHh
Q 001705 71 VIATRNTRERSNRLENMCWRIWHLA 95 (1024)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (1024)
.+.++..-+=..||||++||+|+.+
T Consensus 5 ~~~~k~~l~~~~RLeN~sWR~w~~~ 29 (29)
T PF08550_consen 5 YTKCKDSLPNGERLENLSWRLWNKN 29 (29)
T ss_pred HhhhhhhcCcchhHHHHHHHHHhcC
Confidence 3444545555889999999999863
|
This short section domain is bounded by two highly conserved tryptophans. The entry contains P34072 from SWISSPROT that is thought to be a negative regulator of RAS-cAMP pathway in S. cerevisiae and the S. pombe member is a GAF1 transcription factor Q10280 from SWISSPROT that is also associated with the zinc finger family GATA PF00320 from PFAM. |
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.093 Score=55.90 Aligned_cols=198 Identities=14% Similarity=0.073 Sum_probs=109.9
Q ss_pred CcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCC
Q 001705 303 TWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTST 382 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S 382 (1024)
.+||++.+....+..++.++.++.+.+.++.+.+- .- -...-|+||.+-
T Consensus 69 ~~Pdl~I~aGrrta~l~~~lkk~~~~~~vVqI~~P------------------rl-------------p~~~fDlvivp~ 117 (329)
T COG3660 69 QRPDLIITAGRRTAPLAFYLKKKFGGIKVVQIQDP------------------RL-------------PYNHFDLVIVPY 117 (329)
T ss_pred CCCceEEecccchhHHHHHHHHhcCCceEEEeeCC------------------CC-------------CcccceEEeccc
Confidence 58999999998899999999988877665555421 10 134578999998
Q ss_pred HHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCC
Q 001705 383 RQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLP 462 (1024)
Q Consensus 383 ~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p 462 (1024)
.+.++++-.- ...++|.-=.+..+.+.. ..
T Consensus 118 HD~~~~~s~~----------------------------~~Nilpi~Gs~h~Vt~~~----------------------lA 147 (329)
T COG3660 118 HDWREELSDQ----------------------------GPNILPINGSPHNVTSQR----------------------LA 147 (329)
T ss_pred hhhhhhhhcc----------------------------CCceeeccCCCCcccHHH----------------------hh
Confidence 8877752111 223344211222222211 00
Q ss_pred cchHHHhhhhCCCCCcEEEEEeCCCCCCCH-----HHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHH
Q 001705 463 PMWSEVMRFFTNPHKPTILALSRPDPKKNV-----TTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVL 536 (1024)
Q Consensus 463 ~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi-----~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~ 536 (1024)
...+...++.-.+...+-+.||.-.+.-.+ ..+..++-+.. ......+ +--++... ..+.
T Consensus 148 a~~e~~~~~~p~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l---~~~g~~~lisfSRRTp-----------~~~~ 213 (329)
T COG3660 148 ALREAFKHLLPLPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKIL---ENQGGSFLISFSRRTP-----------DTVK 213 (329)
T ss_pred hhHHHHHhhCCCCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHH---HhCCceEEEEeecCCc-----------HHHH
Confidence 111122233334566788888887654443 22222222221 1122223 33333222 2223
Q ss_pred HHHHH-cCCCCCEEeCCC-CCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCC
Q 001705 537 KLIDK-YDLYGQVAYPKH-HKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNG 602 (1024)
Q Consensus 537 ~~i~~-~~l~~~V~~~g~-~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~G 602 (1024)
..+.. +.-.+.+++.+. -..+-..+++.+| |.+|.+.-.-.| +-||++.|+||.+-...
T Consensus 214 s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~A----dyii~TaDSinM---~sEAasTgkPv~~~~~~ 274 (329)
T COG3660 214 SILKNNLNSSPGIVWNNEDTGYNPYIDMLAAA----DYIISTADSINM---CSEAASTGKPVFILEPP 274 (329)
T ss_pred HHHHhccccCceeEeCCCCCCCCchHHHHhhc----ceEEEecchhhh---hHHHhccCCCeEEEecC
Confidence 33333 455555666554 2345688999999 999998654443 78999999999776543
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.01 Score=75.19 Aligned_cols=151 Identities=16% Similarity=0.145 Sum_probs=99.4
Q ss_pred ccceeEEEEE-ecCC--C---CCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEE
Q 001705 745 RRQMLIVIAA-DCYD--S---DGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIV 818 (1024)
Q Consensus 745 ~~~rlllIa~-DlDG--T---l~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI 818 (1024)
...|.+.+|+ |.++ + +..-...+-+..+++++++++. |+++++.||.+...+..+.+++||.. + +
T Consensus 415 ~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~a----GI~v~miTGD~~~tA~~IA~~lGI~~---~-~- 485 (755)
T TIGR01647 415 RGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERARHL----GVEVKMVTGDHLAIAKETARRLGLGT---N-I- 485 (755)
T ss_pred CCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCCCC---C-C-
Confidence 4456777777 4322 3 1111234668899999999998 99999999999999999999999831 0 0
Q ss_pred ecCCceEEcCCCccccCcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHH
Q 001705 819 CNSGSELYFPWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIR 898 (1024)
Q Consensus 819 ~~nGa~I~~~~~~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~ 898 (1024)
. .|..+.. .. ..+ .. .-+++.
T Consensus 486 ~-~~~~l~~--------------------------------~~-------~~~------------~~-------~~~~~~ 506 (755)
T TIGR01647 486 Y-TADVLLK--------------------------------GD-------NRD------------DL-------PSGELG 506 (755)
T ss_pred c-CHHHhcC--------------------------------Cc-------chh------------hC-------CHHHHH
Confidence 0 0100000 00 000 00 012344
Q ss_pred HHHHhcCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCC
Q 001705 899 QRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYG 978 (1024)
Q Consensus 899 ~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA 978 (1024)
+.+... . -+-++.|. .|..-++.|.+ .| ++++++||+-| | .+.|+.++.||||+ +|
T Consensus 507 ~~~~~~----~-------vfAr~~Pe--~K~~iV~~lq~-~G----~~VamvGDGvN-D-apAL~~AdVGIAm~----~g 562 (755)
T TIGR01647 507 EMVEDA----D-------GFAEVFPE--HKYEIVEILQK-RG----HLVGMTGDGVN-D-APALKKADVGIAVA----GA 562 (755)
T ss_pred HHHHhC----C-------EEEecCHH--HHHHHHHHHHh-cC----CEEEEEcCCcc-c-HHHHHhCCeeEEec----CC
Confidence 444321 1 14455564 58888888754 33 46777899999 9 99999999999999 99
Q ss_pred hHHHhcccc
Q 001705 979 SEKLLHGED 987 (1024)
Q Consensus 979 ~~elk~~ad 987 (1024)
++-.+++||
T Consensus 563 tdvAkeaAD 571 (755)
T TIGR01647 563 TDAARSAAD 571 (755)
T ss_pred cHHHHHhCC
Confidence 998899999
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0021 Score=62.72 Aligned_cols=54 Identities=11% Similarity=0.015 Sum_probs=43.9
Q ss_pred EEEEecCCCCCCCc----h--------hhHHHHHHHHHHHhhccCCCCeEEEEECCC-CHHHHHHHHHhcC
Q 001705 751 VIAADCYDSDGNTT----E--------TFQATIKNVMKAAGLSLGLGRVGFILVTGS-SLGETMEAIRRCT 808 (1024)
Q Consensus 751 lIa~DlDGTl~~~~----~--------~i~~~~~~~l~~l~~~~~~~gi~~viaTGR-~~~~~~~~l~~~~ 808 (1024)
+|++|+||||.+.. + .+-+.+.++|+.|+++ |+.++|+|++ +...+...++..+
T Consensus 2 li~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~----g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 2 VIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKN----GFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred EEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHC----CeEEEEEeCCCCHHHHHHHHHhcc
Confidence 56799999977652 1 1467999999999987 9999999999 7777778888765
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=96.80 E-value=1.9 Score=51.72 Aligned_cols=138 Identities=13% Similarity=0.151 Sum_probs=75.7
Q ss_pred CCcEEEEEeCCCC--CCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCC
Q 001705 476 HKPTILALSRPDP--KKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKH 553 (1024)
Q Consensus 476 ~~~~Il~vgRld~--~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~ 553 (1024)
+..+.++.|.... .+-+..++.+++... ..+..+++...+.... ....-..+.+.+. ...+...++
T Consensus 283 ~svVyvsfGS~~~~~~~~~~ela~gL~~~~-----~~flw~~~~~~~~~~~---~~~lp~~~~~r~~----~~g~~v~~w 350 (477)
T PLN02863 283 HKVVYVCFGSQVVLTKEQMEALASGLEKSG-----VHFIWCVKEPVNEESD---YSNIPSGFEDRVA----GRGLVIRGW 350 (477)
T ss_pred CceEEEEeeceecCCHHHHHHHHHHHHhCC-----CcEEEEECCCcccccc---hhhCCHHHHHHhc----cCCEEecCC
Confidence 3456677787643 233666677766552 2444455532111000 0000111112111 235777789
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhh-hccCCcEEEeCC-----CCHH
Q 001705 554 HKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG----PVDI-LKALNNGLLVDP-----HDQN 623 (1024)
Q Consensus 554 ~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg----~~ei-i~~~~~Gllv~p-----~d~~ 623 (1024)
+|+. +++... +.++||.- -| -.+.+||+++|+|+|+-...+ .... ++..+.|+.+.. -+.+
T Consensus 351 ~PQ~---~vL~h~--~v~~fvtH---~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~~ 421 (477)
T PLN02863 351 APQV---AILSHR--AVGAFLTH---CG-WNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVPDSD 421 (477)
T ss_pred CCHH---HHhcCC--CcCeEEec---CC-chHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCcCHH
Confidence 8875 456553 12667632 23 358899999999999976433 2222 233466776621 2678
Q ss_pred HHHHHHHHHHh
Q 001705 624 AIADALLKLLA 634 (1024)
Q Consensus 624 ~la~aI~~ll~ 634 (1024)
++++++.+++.
T Consensus 422 ~v~~~v~~~m~ 432 (477)
T PLN02863 422 ELARVFMESVS 432 (477)
T ss_pred HHHHHHHHHhh
Confidence 99999999884
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.021 Score=73.50 Aligned_cols=125 Identities=15% Similarity=0.184 Sum_probs=87.6
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCCccccCcchhhhhccc
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYEAHVEYR 845 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~~~~~d~~~~~~i~~~ 845 (1024)
.+-++++++++++++. ||++++.||=+...+..+.+++||. .+.++ .|.++
T Consensus 550 p~R~~a~~aI~~l~~a----GI~v~miTGD~~~tA~aIA~~lGI~---~~~vi--~G~el-------------------- 600 (903)
T PRK15122 550 PPKESAAPAIAALREN----GVAVKVLTGDNPIVTAKICREVGLE---PGEPL--LGTEI-------------------- 600 (903)
T ss_pred ccHHHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCCC---CCCcc--chHhh--------------------
Confidence 5678999999999998 9999999999999999999999883 11000 01000
Q ss_pred CCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCC
Q 001705 846 WPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSF 925 (1024)
Q Consensus 846 w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~g 925 (1024)
. .+ . -+++.+.+.. ++ -+-.+.|.
T Consensus 601 ------~----~~---------------------------~-------~~el~~~v~~----~~-------VfAr~sPe- 624 (903)
T PRK15122 601 ------E----AM---------------------------D-------DAALAREVEE----RT-------VFAKLTPL- 624 (903)
T ss_pred ------h----hC---------------------------C-------HHHHHHHhhh----CC-------EEEEeCHH-
Confidence 0 00 0 0123333321 11 13344443
Q ss_pred CCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccc
Q 001705 926 ASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 926 asKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad 987 (1024)
.|..-++.|.++ | ++|+++||+-| | .+.|+.|+.||||| +|++-.|++||
T Consensus 625 -~K~~iV~~Lq~~-G----~vVamtGDGvN-D-aPALk~ADVGIAmg----~gtdvAkeaAD 674 (903)
T PRK15122 625 -QKSRVLKALQAN-G----HTVGFLGDGIN-D-APALRDADVGISVD----SGADIAKESAD 674 (903)
T ss_pred -HHHHHHHHHHhC-C----CEEEEECCCch-h-HHHHHhCCEEEEeC----cccHHHHHhcC
Confidence 477777777643 2 47777899999 9 99999999999999 99988899999
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.024 Score=73.16 Aligned_cols=62 Identities=16% Similarity=0.131 Sum_probs=47.2
Q ss_pred ccceeEEEEEec---CCC---CCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCC
Q 001705 745 RRQMLIVIAADC---YDS---DGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVN 810 (1024)
Q Consensus 745 ~~~rlllIa~Dl---DGT---l~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~ 810 (1024)
...|.+.+|++- |.| +..-...+-+.++++++++++. |+++++.||-+...+..+.+++|+.
T Consensus 501 ~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~----Gi~v~miTGD~~~tA~~ia~~~Gi~ 568 (884)
T TIGR01522 501 AGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITG----GVRIIMITGDSQETAVSIARRLGMP 568 (884)
T ss_pred cCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCCC
Confidence 344667777653 223 1111235678999999999987 9999999999999999999999984
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.67 E-value=2.2 Score=50.68 Aligned_cols=93 Identities=17% Similarity=0.160 Sum_probs=61.0
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhh-ccCCcEEEeCC---
Q 001705 548 VAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----VDIL-KALNNGLLVDP--- 619 (1024)
Q Consensus 548 V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~----~eii-~~~~~Gllv~p--- 619 (1024)
+...+++|+.+ ++... ..++||.- +-..+.+||+++|+|+|+-...+= ...+ +....|+.+.+
T Consensus 319 ~v~~~W~PQ~~---vL~h~--~v~~FvtH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~ 389 (453)
T PLN02764 319 VVWGGWVQQPL---ILSHP--SVGCFVSH----CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREET 389 (453)
T ss_pred cEEeCCCCHHH---HhcCc--ccCeEEec----CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccC
Confidence 56668888875 44443 12556632 334789999999999999775442 2233 33455666532
Q ss_pred --CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHH
Q 001705 620 --HDQNAIADALLKLLADK-NMWSECRKNGLKN 649 (1024)
Q Consensus 620 --~d~~~la~aI~~ll~d~-~~~~~~~~~~~~~ 649 (1024)
-+.+++++++.+++.++ +..+++++++++.
T Consensus 390 ~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~ 422 (453)
T PLN02764 390 GWFSKESLRDAINSVMKRDSEIGNLVKKNHTKW 422 (453)
T ss_pred CccCHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 27899999999999875 4556666666554
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.028 Score=65.93 Aligned_cols=178 Identities=13% Similarity=0.140 Sum_probs=122.9
Q ss_pred CCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCC-CCEEe
Q 001705 473 TNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLY-GQVAY 550 (1024)
Q Consensus 473 ~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~-~~V~~ 550 (1024)
++++..+++++++ +.|-.+.++.-+-++ ++.-|+-+| +.|++++ +++...++.++++.|+. .++.|
T Consensus 426 lp~~avVf~c~~n--~~K~~pev~~~wmqI--L~~vP~Svl~L~~~~~~--------~~~~~~l~~la~~~Gv~~eRL~f 493 (620)
T COG3914 426 LPEDAVVFCCFNN--YFKITPEVFALWMQI--LSAVPNSVLLLKAGGDD--------AEINARLRDLAEREGVDSERLRF 493 (620)
T ss_pred CCCCeEEEEecCC--cccCCHHHHHHHHHH--HHhCCCcEEEEecCCCc--------HHHHHHHHHHHHHcCCChhheee
Confidence 3455444444444 566667777777666 355566555 5555543 56789999999999884 67999
Q ss_pred CCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEc-------CCCCchhhhcc-CCcEEEeCCCCH
Q 001705 551 PKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVAT-------KNGGPVDILKA-LNNGLLVDPHDQ 622 (1024)
Q Consensus 551 ~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat-------~~Gg~~eii~~-~~~Gllv~p~d~ 622 (1024)
.+..+.++..+.|..| |+++=+--+ |-..|.+|++-+|+|||.- .+|+ -|+.+ |-.-++.+ +.
T Consensus 494 ~p~~~~~~h~a~~~iA----DlvLDTyPY-~g~TTa~daLwm~vPVlT~~G~~FasR~~~--si~~~agi~e~vA~--s~ 564 (620)
T COG3914 494 LPPAPNEDHRARYGIA----DLVLDTYPY-GGHTTASDALWMGVPVLTRVGEQFASRNGA--SIATNAGIPELVAD--SR 564 (620)
T ss_pred cCCCCCHHHHHhhchh----heeeecccC-CCccchHHHHHhcCceeeeccHHHHHhhhH--HHHHhcCCchhhcC--CH
Confidence 9999999999999999 998855333 3358999999999999863 3444 22222 22233443 55
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHH-h--cCCHHHHHHHHHHHHHHhhh
Q 001705 623 NAIADALLKLLADKNMWSECRKNGLKNI-H--RFSWPEHCRNYLSHVEHSRN 671 (1024)
Q Consensus 623 ~~la~aI~~ll~d~~~~~~~~~~~~~~~-~--~fsw~~~a~~~l~~~~~~~~ 671 (1024)
++..+.-..+=.|..++++.+....+.. . -|+.+..++++.+.|..+-+
T Consensus 565 ~dYV~~av~~g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~~ 616 (620)
T COG3914 565 ADYVEKAVAFGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMWS 616 (620)
T ss_pred HHHHHHHHHhcccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHHH
Confidence 5554444455567777888777766665 2 69999999999999987654
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.014 Score=74.97 Aligned_cols=125 Identities=14% Similarity=0.196 Sum_probs=84.8
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCCccccCcchhhhhccc
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYEAHVEYR 845 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~~~~~d~~~~~~i~~~ 845 (1024)
.+-+.++++++++++. |+++++.||-+...+..+.+++||.. .+ ++ .|..+..
T Consensus 515 p~R~~~~~aI~~l~~a----GI~vvmiTGD~~~tA~aIA~~lGI~~--~~-v~--~g~~l~~------------------ 567 (867)
T TIGR01524 515 PPKESTKEAIAALFKN----GINVKVLTGDNEIVTARICQEVGIDA--ND-FL--LGADIEE------------------ 567 (867)
T ss_pred CCchhHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCCCC--CC-ee--ecHhhhh------------------
Confidence 4668899999999998 99999999999999999999999831 11 10 0110000
Q ss_pred CCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCC
Q 001705 846 WPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSF 925 (1024)
Q Consensus 846 w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~g 925 (1024)
+ . -+++.+.+.. +++ +-.+.|.
T Consensus 568 ------------~---------------------------~-------~~el~~~~~~----~~v-------fAr~~Pe- 589 (867)
T TIGR01524 568 ------------L---------------------------S-------DEELARELRK----YHI-------FARLTPM- 589 (867)
T ss_pred ------------C---------------------------C-------HHHHHHHhhh----CeE-------EEECCHH-
Confidence 0 0 0122222211 111 2223332
Q ss_pred CCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccc
Q 001705 926 ASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 926 asKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad 987 (1024)
.|..-++.|.++ | ++++++||+-| | .++|+.|+.||||| +|++-.|++||
T Consensus 590 -~K~~iV~~lq~~-G----~vVam~GDGvN-D-apALk~AdVGIAmg----~gtdvAk~aAD 639 (867)
T TIGR01524 590 -QKSRIIGLLKKA-G----HTVGFLGDGIN-D-APALRKADVGISVD----TAADIAKEASD 639 (867)
T ss_pred -HHHHHHHHHHhC-C----CEEEEECCCcc-c-HHHHHhCCEEEEeC----CccHHHHHhCC
Confidence 477666666542 2 46777899999 9 99999999999999 99988899999
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.016 Score=74.67 Aligned_cols=125 Identities=17% Similarity=0.196 Sum_probs=87.4
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCCccccCcchhhhhccc
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYEAHVEYR 845 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~~~~~d~~~~~~i~~~ 845 (1024)
.+-++++++++++++. |+++++.||-+...+..+.+++||. .+.++ .|.+
T Consensus 550 p~R~~a~~aI~~l~~a----GI~v~miTGD~~~tA~~IA~~lGI~---~~~v~--~G~e--------------------- 599 (902)
T PRK10517 550 PPKETTAPALKALKAS----GVTVKILTGDSELVAAKVCHEVGLD---AGEVL--IGSD--------------------- 599 (902)
T ss_pred cchhhHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCCC---ccCce--eHHH---------------------
Confidence 4668999999999998 9999999999999999999999983 11010 0110
Q ss_pred CCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCC
Q 001705 846 WPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSF 925 (1024)
Q Consensus 846 w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~g 925 (1024)
+. .+ . -+++.+.++.. .+ +-.+.|.
T Consensus 600 -----l~----~l---------------------------~-------~~el~~~~~~~----~V-------fAr~sPe- 624 (902)
T PRK10517 600 -----IE----TL---------------------------S-------DDELANLAERT----TL-------FARLTPM- 624 (902)
T ss_pred -----HH----hC---------------------------C-------HHHHHHHHhhC----cE-------EEEcCHH-
Confidence 00 00 0 01233333221 11 2334443
Q ss_pred CCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccc
Q 001705 926 ASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 926 asKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad 987 (1024)
.|..-++.|.++ | ++|+++||+-| | .+.|+.|+.||||| +|.+-.|++||
T Consensus 625 -~K~~IV~~Lq~~-G----~vVam~GDGvN-D-aPALk~ADVGIAmg----~gtdvAkeaAD 674 (902)
T PRK10517 625 -HKERIVTLLKRE-G----HVVGFMGDGIN-D-APALRAADIGISVD----GAVDIAREAAD 674 (902)
T ss_pred -HHHHHHHHHHHC-C----CEEEEECCCcc-h-HHHHHhCCEEEEeC----CcCHHHHHhCC
Confidence 577777777542 3 47777899999 9 99999999999999 99988899999
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.011 Score=77.31 Aligned_cols=154 Identities=10% Similarity=0.115 Sum_probs=93.8
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCCccccCcchhhhhccc
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYEAHVEYR 845 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~~~~~d~~~~~~i~~~ 845 (1024)
.+-+.+.++|+++++. ||++++.||.+...+..+.+++||.. .+ .+ ... +..
T Consensus 646 p~r~~v~~aI~~l~~a----GIkv~MiTGD~~~tA~~iA~~~Gi~~--~~-~~-------~~~------~~~-------- 697 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQA----GINVHMLTGDFPETAKAIAQEVGIIP--PN-FI-------HDR------DEI-------- 697 (1053)
T ss_pred CCchhHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHcCCCC--cc-cc-------ccc------ccc--------
Confidence 3568889999999997 99999999999999999999999831 11 10 000 000
Q ss_pred CCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCC
Q 001705 846 WPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSF 925 (1024)
Q Consensus 846 w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~g 925 (1024)
.. . . +....... . .. -+++.+.+.. +. ++ -.+.|.
T Consensus 698 ~~---------~--~-------vitG~~l~-------~-l~-------~~~l~~~~~~----~~-V~------ar~sP~- 732 (1053)
T TIGR01523 698 MD---------S--M-------VMTGSQFD-------A-LS-------DEEVDDLKAL----CL-VI------ARCAPQ- 732 (1053)
T ss_pred cc---------c--e-------eeehHHhh-------h-cC-------HHHHHHHhhc----Ce-EE------EecCHH-
Confidence 00 0 0 00000000 0 00 0123222221 11 21 223332
Q ss_pred CCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEe
Q 001705 926 ASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYI 1005 (1024)
Q Consensus 926 asKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~v 1005 (1024)
.|..-++.|.+. | ++++++||+-| | .+||+.++.||||| .+|.+-.+++|| ++
T Consensus 733 -~K~~iV~~lq~~-g----~~Vam~GDGvN-D-apaLk~AdVGIAmg---~~gt~vak~aAD----------------iv 785 (1053)
T TIGR01523 733 -TKVKMIEALHRR-K----AFCAMTGDGVN-D-SPSLKMANVGIAMG---INGSDVAKDASD----------------IV 785 (1053)
T ss_pred -HHHHHHHHHHhc-C----CeeEEeCCCcc-h-HHHHHhCCccEecC---CCccHHHHHhcC----------------EE
Confidence 588888888764 2 34555799999 9 99999999999997 246777789999 55
Q ss_pred ccccChhHHHHHHH
Q 001705 1006 EESYEPQDLSAALK 1019 (1024)
Q Consensus 1006 t~~~~~dgI~~aL~ 1019 (1024)
-.+.+-..|..+++
T Consensus 786 l~dd~f~~I~~~i~ 799 (1053)
T TIGR01523 786 LSDDNFASILNAIE 799 (1053)
T ss_pred EecCCHHHHHHHHH
Confidence 44445556666654
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0095 Score=65.15 Aligned_cols=197 Identities=12% Similarity=0.049 Sum_probs=105.1
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEEC---CCCHHHHHHHHHh-cCCCCCCCCEEEecCCceEE
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVT---GSSLGETMEAIRR-CTVNIEDFDAIVCNSGSELY 826 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaT---GR~~~~~~~~l~~-~~i~~~~~d~lI~~nGa~I~ 826 (1024)
.+.+|+|||+.+. .+.-+...++|+.|+++ |+.+++.| .|+...+..-|.. .+++ ..++.++++.=+...
T Consensus 10 ~~l~DlDGvl~~G-~~~ipga~e~l~~L~~~----g~~~iflTNn~~~s~~~~~~~L~~~~~~~-~~~~~i~TS~~at~~ 83 (269)
T COG0647 10 GFLFDLDGVLYRG-NEAIPGAAEALKRLKAA----GKPVIFLTNNSTRSREVVAARLSSLGGVD-VTPDDIVTSGDATAD 83 (269)
T ss_pred EEEEcCcCceEeC-CccCchHHHHHHHHHHc----CCeEEEEeCCCCCCHHHHHHHHHhhcCCC-CCHHHeecHHHHHHH
Confidence 4459999997765 45567888999999998 89888876 5566667777887 4443 345555553222111
Q ss_pred cCCCccccCcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCC
Q 001705 827 FPWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGF 906 (1024)
Q Consensus 827 ~~~~~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~ 906 (1024)
+-......... +....+.+...+...... ..........-++....+... ..+.+.+.+.....
T Consensus 84 ~l~~~~~~~kv------~viG~~~l~~~l~~~G~~-------~~~~~~~~~~d~Vv~g~d~~~---~~e~l~~a~~~i~~ 147 (269)
T COG0647 84 YLAKQKPGKKV------YVIGEEGLKEELEGAGFE-------LVDEEEPARVDAVVVGLDRTL---TYEKLAEALLAIAA 147 (269)
T ss_pred HHHhhCCCCEE------EEECCcchHHHHHhCCcE-------EeccCCCCcccEEEEecCCCC---CHHHHHHHHHHHHc
Confidence 10000000011 112234455555443321 111111111223333323222 22334433332222
Q ss_pred eEEEEEecCCeE---------------------EEEecCCCCHHHH--HHHHHHHhCCCCCCEEEEeCCCCCCChHHhhc
Q 001705 907 RCNLVYTRAGSR---------------------LNVVPSFASRIQA--LRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLV 963 (1024)
Q Consensus 907 ~~~v~~s~~~~~---------------------lEI~p~gasKg~A--L~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~ 963 (1024)
.+.++.+++... -...|.-+.|-.. .+..++.++.+.++++++ ||+.+|| +.+=.
T Consensus 148 g~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~tg~~~~~~GKP~~~i~~~al~~~~~~~~~~~mV-GD~~~TD-I~~a~ 225 (269)
T COG0647 148 GAPFIATNPDLTVPTERGLRPGAGAIAALLEQATGREPTVIGKPSPAIYEAALEKLGLDRSEVLMV-GDRLDTD-ILGAK 225 (269)
T ss_pred CCcEEEeCCCccccCCCCCccCcHHHHHHHHHhhCCcccccCCCCHHHHHHHHHHhCCCcccEEEE-cCCchhh-HHHHH
Confidence 244444443211 1233445566444 566778899999999995 9999999 88888
Q ss_pred CCCceEEe
Q 001705 964 GLHKTLIL 971 (1024)
Q Consensus 964 ~ag~gVaM 971 (1024)
.+|..-++
T Consensus 226 ~~G~~t~L 233 (269)
T COG0647 226 AAGLDTLL 233 (269)
T ss_pred HcCCCEEE
Confidence 88875443
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.014 Score=60.45 Aligned_cols=43 Identities=12% Similarity=0.020 Sum_probs=33.6
Q ss_pred ecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEE
Q 001705 922 VPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLI 970 (1024)
Q Consensus 922 ~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVa 970 (1024)
.+.+..|+..++.+...+ +++++++ ||+.| | ++|.+.++.-+|
T Consensus 144 ~~~g~~K~~~~~~~~~~~---~~~~i~i-GD~~~-D-~~aa~~~d~~~a 186 (188)
T TIGR01489 144 CPCGCCKGKVIHKLSEPK---YQHIIYI-GDGVT-D-VCPAKLSDVVFA 186 (188)
T ss_pred CCCCCCHHHHHHHHHhhc---CceEEEE-CCCcc-h-hchHhcCCcccc
Confidence 356678999999988765 5778775 99999 9 999888765443
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0032 Score=71.18 Aligned_cols=64 Identities=11% Similarity=0.091 Sum_probs=49.3
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCC---HHHHHHHHHhcCCCCCCCCEEEec
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSS---LGETMEAIRRCTVNIEDFDAIVCN 820 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~---~~~~~~~l~~~~i~~~~~d~lI~~ 820 (1024)
++++|+||||.+.++ +.+...++|++|+++ |+.|+++|+|+ ...+.+-|..+|++ ..++-++++
T Consensus 30 ~~~~D~DGtl~~~~~-~~~ga~e~l~~lr~~----g~~~~~~TN~~~~~~~~~~~~l~~lGi~-~~~~~I~ts 96 (311)
T PLN02645 30 TFIFDCDGVIWKGDK-LIEGVPETLDMLRSM----GKKLVFVTNNSTKSRAQYGKKFESLGLN-VTEEEIFSS 96 (311)
T ss_pred EEEEeCcCCeEeCCc-cCcCHHHHHHHHHHC----CCEEEEEeCCCCCCHHHHHHHHHHCCCC-CChhhEeeh
Confidence 566999999887654 557889999999998 99999999999 45555556788886 345555554
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.24 Score=59.81 Aligned_cols=152 Identities=13% Similarity=0.147 Sum_probs=85.5
Q ss_pred hhhhCCCCCcEE-EEEe-CCCC-CCCHHHHHHHHh--hccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcC
Q 001705 469 MRFFTNPHKPTI-LALS-RPDP-KKNVTTLLKAFG--ECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYD 543 (1024)
Q Consensus 469 ~~~~~~~~~~~I-l~vg-Rld~-~Kgi~~ll~A~~--~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~ 543 (1024)
.++..++++++| +..| |-.. ++.++.+++|+. .+. + ++.+++...+. ...+.+.+.++..+
T Consensus 405 ~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~---~--~l~fvvp~a~~---------~~~~~i~~~~~~~~ 470 (608)
T PRK01021 405 EQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLA---S--THQLLVSSANP---------KYDHLILEVLQQEG 470 (608)
T ss_pred HHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhc---c--CeEEEEecCch---------hhHHHHHHHHhhcC
Confidence 344444566654 3333 4333 567788889987 552 2 35565543221 11233444444333
Q ss_pred CCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEc-CCCCchh----------------
Q 001705 544 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVAT-KNGGPVD---------------- 606 (1024)
Q Consensus 544 l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat-~~Gg~~e---------------- 606 (1024)
.. .+.+.. .++-.+++++| |+++..| |.+.+|++.+|+|+|.. +.+...-
T Consensus 471 ~~-~~~ii~---~~~~~~~m~aa----D~aLaaS-----GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsL 537 (608)
T PRK01021 471 CL-HSHIVP---SQFRYELMREC----DCALAKC-----GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSL 537 (608)
T ss_pred CC-CeEEec---CcchHHHHHhc----CeeeecC-----CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeeh
Confidence 11 122211 11246899999 9999876 99999999999999874 3332221
Q ss_pred --hhccCC--cEEE--eCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 001705 607 --ILKALN--NGLL--VDPHDQNAIADALLKLLADKNMWSECRKNGLK 648 (1024)
Q Consensus 607 --ii~~~~--~Gll--v~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~ 648 (1024)
++.+.. .-++ =+.-+++.+++++ +++.|++.++++.+...+
T Consensus 538 pNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~~l~~ 584 (608)
T PRK01021 538 PNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKDACRD 584 (608)
T ss_pred hHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHHHHHH
Confidence 121110 1122 1344789999996 888898876666554443
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.01 Score=73.22 Aligned_cols=58 Identities=14% Similarity=0.120 Sum_probs=44.1
Q ss_pred cceeEEEEEecCCCCC---CCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 746 RQMLIVIAADCYDSDG---NTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 746 ~~rlllIa~DlDGTl~---~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
..+.+.++.| ++++ .=...+-+..++++++|++. |+++++.||=+...+..+.+++|+
T Consensus 424 G~~~l~va~~--~~~lG~i~l~D~~R~~~~eai~~Lr~~----GI~vvMiTGDn~~TA~aIA~elGI 484 (679)
T PRK01122 424 GGTPLVVAED--NRVLGVIYLKDIVKPGIKERFAELRKM----GIKTVMITGDNPLTAAAIAAEAGV 484 (679)
T ss_pred CCcEEEEEEC--CeEEEEEEEeccCchhHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 3455666654 4411 11124668899999999998 999999999999999999999887
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0073 Score=76.21 Aligned_cols=60 Identities=7% Similarity=0.051 Sum_probs=44.9
Q ss_pred cceeEEEEEecCCC-CCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 746 RQMLIVIAADCYDS-DGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 746 ~~rlllIa~DlDGT-l~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
..+.+.++.|..-. +..-...+-+..+++|++|++. |+.+++.||.+...+..+.+++|+
T Consensus 547 g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~----gi~~~llTGd~~~~a~~ia~~lgi 607 (741)
T PRK11033 547 GKTVVLVLRNDDVLGLIALQDTLRADARQAISELKAL----GIKGVMLTGDNPRAAAAIAGELGI 607 (741)
T ss_pred CCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCC
Confidence 34566666653222 1111235668899999999987 999999999999999999999876
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=96.56 E-value=2.6 Score=50.10 Aligned_cols=93 Identities=16% Similarity=0.193 Sum_probs=59.2
Q ss_pred CCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhhcc-CCcEEEeCC-
Q 001705 546 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----VDILKA-LNNGLLVDP- 619 (1024)
Q Consensus 546 ~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~----~eii~~-~~~Gllv~p- 619 (1024)
+++.+.++.|+.+ ++... ..++||. -+-.++++||+++|+|+|+-..-+= ...+.+ ...|+-+..
T Consensus 317 ~~~~i~~W~PQ~~---iL~H~--~v~~Fvt----HcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~ 387 (449)
T PLN02173 317 DKSLVLKWSPQLQ---VLSNK--AIGCFMT----HCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAE 387 (449)
T ss_pred CceEEeCCCCHHH---HhCCC--ccceEEe----cCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeec
Confidence 4577779988764 55555 1135552 2335789999999999999764332 223332 256776642
Q ss_pred -----CCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 001705 620 -----HDQNAIADALLKLLADKNMWSECRKNGLK 648 (1024)
Q Consensus 620 -----~d~~~la~aI~~ll~d~~~~~~~~~~~~~ 648 (1024)
-+.+++++++.+++.+++ .+++++++++
T Consensus 388 ~~~~~~~~e~v~~av~~vm~~~~-~~~~r~~a~~ 420 (449)
T PLN02173 388 KESGIAKREEIEFSIKEVMEGEK-SKEMKENAGK 420 (449)
T ss_pred ccCCcccHHHHHHHHHHHhcCCh-HHHHHHHHHH
Confidence 167999999999997643 3445554444
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.039 Score=62.18 Aligned_cols=110 Identities=15% Similarity=0.108 Sum_probs=68.5
Q ss_pred CCCCcEEEEEeCCCCCC--CHH---HHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCC
Q 001705 474 NPHKPTILALSRPDPKK--NVT---TLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQ 547 (1024)
Q Consensus 474 ~~~~~~Il~vgRld~~K--gi~---~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~ 547 (1024)
.+...+.+.+|.....- +-+ .+++.+..+. .... ..+ |..++. +..+....+.+..+ -.+.
T Consensus 144 l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~--~~~~-~~~~vttSRR-------Tp~~~~~~L~~~~~---~~~~ 210 (311)
T PF06258_consen 144 LPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALA--AAYG-GSLLVTTSRR-------TPPEAEAALRELLK---DNPG 210 (311)
T ss_pred CCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHH--HhCC-CeEEEEcCCC-------CcHHHHHHHHHhhc---CCCc
Confidence 35556677888755332 233 4555555553 2223 333 444442 33445555555544 2346
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCC
Q 001705 548 VAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG 603 (1024)
Q Consensus 548 V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg 603 (1024)
+.+...-+.+-+.+++..| |.+++|.-.-.| +-||+++|+||..-...+
T Consensus 211 ~~~~~~~~~nPy~~~La~a----d~i~VT~DSvSM---vsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 211 VYIWDGTGENPYLGFLAAA----DAIVVTEDSVSM---VSEAAATGKPVYVLPLPG 259 (311)
T ss_pred eEEecCCCCCcHHHHHHhC----CEEEEcCccHHH---HHHHHHcCCCEEEecCCC
Confidence 6555665667799999999 999998654444 789999999998877655
|
The function of this family is unknown. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.027 Score=73.24 Aligned_cols=128 Identities=16% Similarity=0.233 Sum_probs=84.8
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCCccccCcchhhhhccc
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYEAHVEYR 845 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~~~~~d~~~~~~i~~~ 845 (1024)
.+-+.++++++++++. |+++++.||-+...+..+.+++|+.. .+ ..+..+
T Consensus 579 plr~~~~~aI~~l~~a----GI~v~miTGD~~~tA~~iA~~~GI~~--~~-------~~vi~G----------------- 628 (941)
T TIGR01517 579 PLRPGVREAVQECQRA----GITVRMVTGDNIDTAKAIARNCGILT--FG-------GLAMEG----------------- 628 (941)
T ss_pred CCchhHHHHHHHHHHC----CCEEEEECCCChHHHHHHHHHcCCCC--CC-------ceEeeH-----------------
Confidence 4668899999999997 99999999999999999999999831 11 111110
Q ss_pred CCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCC
Q 001705 846 WPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSF 925 (1024)
Q Consensus 846 w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~g 925 (1024)
+.+. .+ . -+++.+.+.. +. + +-.+.|.
T Consensus 629 ---~~~~----~l---------------------------~-------~~el~~~i~~----~~-V------far~sPe- 655 (941)
T TIGR01517 629 ---KEFR----RL---------------------------V-------YEEMDPILPK----LR-V------LARSSPL- 655 (941)
T ss_pred ---HHhh----hC---------------------------C-------HHHHHHHhcc----Ce-E------EEECCHH-
Confidence 0000 00 0 0122222221 11 1 2233343
Q ss_pred CCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccc
Q 001705 926 ASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 926 asKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad 987 (1024)
.|..-++.|.+. | ++++++||+-| | .++|+.|+.||||| .+|.+-.+++||
T Consensus 656 -~K~~iV~~lq~~-g----~vVam~GDGvN-D-apALk~AdVGIAmg---~~gtdvAk~aAD 706 (941)
T TIGR01517 656 -DKQLLVLMLKDM-G----EVVAVTGDGTN-D-APALKLADVGFSMG---ISGTEVAKEASD 706 (941)
T ss_pred -HHHHHHHHHHHC-C----CEEEEECCCCc-h-HHHHHhCCcceecC---CCccHHHHHhCC
Confidence 588888877653 2 36677899999 9 99999999999998 135666788888
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.02 Score=63.36 Aligned_cols=58 Identities=17% Similarity=0.142 Sum_probs=42.8
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhc-ccc
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLH-GED 987 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~-~ad 987 (1024)
.|..++.+++++++++++++++| ||+.+ | +.+-+.+|..++.-+-.-+..+++.. .++
T Consensus 196 ~k~~~~~~~l~~~~~~p~~~l~I-GDs~~-D-i~aA~~AG~~~I~v~~g~~~~~~l~~~~ad 254 (273)
T PRK13225 196 SKRRALSQLVAREGWQPAAVMYV-GDETR-D-VEAARQVGLIAVAVTWGFNDRQSLVAACPD 254 (273)
T ss_pred CCHHHHHHHHHHhCcChhHEEEE-CCCHH-H-HHHHHHCCCeEEEEecCCCCHHHHHHCCCC
Confidence 47789999999999999999996 99999 9 99988899765533221234444543 345
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.012 Score=63.45 Aligned_cols=40 Identities=15% Similarity=0.069 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEE
Q 001705 928 RIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLI 970 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVa 970 (1024)
+...+.++++++|++++++++| ||+.+ | +.+-+.+|..++
T Consensus 153 ~p~~~~~~~~~l~~~p~~~l~I-GDs~~-D-i~aA~~aG~~~i 192 (229)
T PRK13226 153 HPLPLLVAAERIGVAPTDCVYV-GDDER-D-ILAARAAGMPSV 192 (229)
T ss_pred CHHHHHHHHHHhCCChhhEEEe-CCCHH-H-HHHHHHCCCcEE
Confidence 4567999999999999999997 99999 9 999999997654
|
|
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.033 Score=68.18 Aligned_cols=139 Identities=16% Similarity=0.134 Sum_probs=103.7
Q ss_pred CCCCcEEEEEeCCCCCCCHHHHHHHHhhcccc---CCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEe
Q 001705 474 NPHKPTILALSRPDPKKNVTTLLKAFGECQPL---RELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAY 550 (1024)
Q Consensus 474 ~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l---~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~ 550 (1024)
+|+..+++++-|+...|.....+.-...+... ...|.+.+|.|+...... ......+..|+..++..+...+|.|
T Consensus 484 ~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y--~~aK~iIk~I~~~a~~in~~lkVvF 561 (750)
T COG0058 484 DPNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPAD--YAAKEIIKLINDVADVINNKLKVVF 561 (750)
T ss_pred CCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcc--hHHHHHHHHHHHHHHhhcccceEEE
Confidence 57788999999999999776655433333211 234667756555433222 1234677888888888877778999
Q ss_pred CCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhc--cCCcEEEeC
Q 001705 551 PKHHKQSDVPDIYRLAAKTKGVFINPAL--VEPFGLTIIEAAAYGLPVVATKNGGPVDILK--ALNNGLLVD 618 (1024)
Q Consensus 551 ~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Egfgl~llEAmA~G~PVVat~~Gg~~eii~--~~~~Gllv~ 618 (1024)
+...+-+--.-++.+| ||-.+.|. .|..|..=+-+|.-|.+.|+|..|+..|+.+ .+.||+++-
T Consensus 562 l~nYdvslA~~iipa~----Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG 629 (750)
T COG0058 562 LPNYDVSLAELLIPAA----DVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFG 629 (750)
T ss_pred eCCCChhHHHhhcccc----cccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeC
Confidence 8887655555566666 99998876 5999999999999999999999999999997 789999995
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=96.34 E-value=3.6 Score=49.19 Aligned_cols=136 Identities=14% Similarity=0.192 Sum_probs=76.4
Q ss_pred CCcEEEEEeCCCC--CCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCC
Q 001705 476 HKPTILALSRPDP--KKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKH 553 (1024)
Q Consensus 476 ~~~~Il~vgRld~--~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~ 553 (1024)
...+.+++|.... .+-+..+..+++... ..+..+++.....+ . ...+.+... .++..+.++
T Consensus 269 ~svvyvsfGS~~~~~~~~~~e~a~~l~~~~-----~~flw~~~~~~~~~-----~---~~~~~~~~~----~~~g~v~~w 331 (456)
T PLN02210 269 SSVVYISFGSMLESLENQVETIAKALKNRG-----VPFLWVIRPKEKAQ-----N---VQVLQEMVK----EGQGVVLEW 331 (456)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHhCC-----CCEEEEEeCCcccc-----c---hhhHHhhcc----CCCeEEEec
Confidence 3567788887643 233555556665442 24434554311100 0 111112211 123344588
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhhcc-CCcEEEeCC------CCH
Q 001705 554 HKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----VDILKA-LNNGLLVDP------HDQ 622 (1024)
Q Consensus 554 ~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~----~eii~~-~~~Gllv~p------~d~ 622 (1024)
.|+. +++..++ .++||.- -|+ .+++|++++|+|+|+-...+= ...+.+ .+.|+.++. -+.
T Consensus 332 ~PQ~---~iL~h~~--vg~FitH---~G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~ 402 (456)
T PLN02210 332 SPQE---KILSHMA--ISCFVTH---CGW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKV 402 (456)
T ss_pred CCHH---HHhcCcC--cCeEEee---CCc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCH
Confidence 8776 4666661 2355532 233 578899999999999764432 223333 567877742 368
Q ss_pred HHHHHHHHHHHhCHH
Q 001705 623 NAIADALLKLLADKN 637 (1024)
Q Consensus 623 ~~la~aI~~ll~d~~ 637 (1024)
+++++++++++.+++
T Consensus 403 ~~l~~av~~~m~~~~ 417 (456)
T PLN02210 403 EEVERCIEAVTEGPA 417 (456)
T ss_pred HHHHHHHHHHhcCch
Confidence 899999999997643
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.023 Score=67.67 Aligned_cols=36 Identities=11% Similarity=0.202 Sum_probs=28.4
Q ss_pred CEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhccccc
Q 001705 945 KMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDA 988 (1024)
Q Consensus 945 ~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~ 988 (1024)
+++. +||+.+ | ++|++.++..++++ .++.+.+.|+.
T Consensus 141 ~~~y-vGDS~~-D-lp~~~~A~~av~Vn-----~~~~l~~~a~~ 176 (479)
T PRK08238 141 GFDY-AGNSAA-D-LPVWAAARRAIVVG-----ASPGVARAARA 176 (479)
T ss_pred CeeE-ecCCHH-H-HHHHHhCCCeEEEC-----CCHHHHHHHHH
Confidence 3445 499999 9 99999999999998 45557766663
|
|
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.016 Score=71.57 Aligned_cols=149 Identities=13% Similarity=0.119 Sum_probs=104.4
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHhhccccCCCC-----cEEEEEecCCCcccccccchHHHHHHHHHHHHc----
Q 001705 473 TNPHKPTILALSRPDPKKNVTT-LLKAFGECQPLRELA-----NMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKY---- 542 (1024)
Q Consensus 473 ~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~l~~~~-----~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~---- 542 (1024)
.+|+..+++++-|+...|.... ++..+.++..+...| ..++|.|+...... ......+..|...++..
T Consensus 523 ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y--~~aK~iIklI~~va~~iN~Dp 600 (794)
T TIGR02093 523 VDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGY--HMAKLIIKLINSVAEVVNNDP 600 (794)
T ss_pred cCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCc--HHHHHHHHHHHHHHHHhccCh
Confidence 4678889999999999998877 666655554444443 34555544322111 11234555666665442
Q ss_pred CCCC--CEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhcc--CCcEEE
Q 001705 543 DLYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAL--VEPFGLTIIEAAAYGLPVVATKNGGPVDILKA--LNNGLL 616 (1024)
Q Consensus 543 ~l~~--~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~--~~~Gll 616 (1024)
.+.+ +|.|+.-..-+--..++.+| ||-.+.|. .|..|..=+-+|.-|.+.|+|..|+..|+.++ .+|+++
T Consensus 601 ~v~~~lkVVFlenY~VslAe~iipaa----Dvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fi 676 (794)
T TIGR02093 601 AVGDKLKVVFVPNYNVSLAELIIPAA----DLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFI 676 (794)
T ss_pred hhCCceeEEEeCCCChHHHHHhhhhh----hhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEE
Confidence 2444 68888776555556666667 99998876 59999999999999999999999999999977 789999
Q ss_pred eCCCCHHHHHHH
Q 001705 617 VDPHDQNAIADA 628 (1024)
Q Consensus 617 v~p~d~~~la~a 628 (1024)
|- .+.+++.+.
T Consensus 677 FG-~~~~ev~~~ 687 (794)
T TIGR02093 677 FG-LTVEEVEAL 687 (794)
T ss_pred cC-CCHHHHHHH
Confidence 94 466665543
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.016 Score=71.57 Aligned_cols=40 Identities=8% Similarity=0.096 Sum_probs=36.9
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
.+-++.++++++|++. |+++++.||-+...+..+.+++|+
T Consensus 441 p~R~~a~e~I~~Lr~~----GI~vvMiTGDn~~TA~aIA~elGI 480 (673)
T PRK14010 441 VIKDGLVERFRELREM----GIETVMCTGDNELTAATIAKEAGV 480 (673)
T ss_pred CCcHHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 4668899999999998 999999999999999999999887
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.033 Score=71.89 Aligned_cols=129 Identities=15% Similarity=0.303 Sum_probs=83.7
Q ss_pred hHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCCccccCcchhhhhcccC
Q 001705 767 FQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYEAHVEYRW 846 (1024)
Q Consensus 767 i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~~~~~d~~~~~~i~~~w 846 (1024)
+-++++++|+.+++. ||++..+||-+...+..+.+++|+.. +.+.-++-.|+++-.
T Consensus 548 pr~~v~~aI~~l~~A----GI~v~MiTGD~~~TA~aIa~~~Gi~~-~~~~~~vi~G~el~~------------------- 603 (917)
T COG0474 548 PREDVKEAIEELREA----GIKVWMITGDHVETAIAIAKECGIEA-EAESALVIDGAELDA------------------- 603 (917)
T ss_pred CCccHHHHHHHHHHC----CCcEEEECCCCHHHHHHHHHHcCCCC-CCCceeEeehHHhhh-------------------
Confidence 447888999999998 99999999999999999999988742 000000101111100
Q ss_pred CchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCCC
Q 001705 847 PGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFA 926 (1024)
Q Consensus 847 ~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~ga 926 (1024)
. . + +++.+.+... . + |--+.|.
T Consensus 604 -------l----~--------------------------~--------~el~~~~~~~----~-V------fARvsP~-- 625 (917)
T COG0474 604 -------L----S--------------------------D--------EELAELVEEL----S-V------FARVSPE-- 625 (917)
T ss_pred -------c----C--------------------------H--------HHHHHHhhhC----c-E------EEEcCHH--
Confidence 0 0 0 0222222211 1 1 1122221
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccc
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad 987 (1024)
.|..-++.|.++ | +++++.||+-| | .+||+.|+.||+|++ +|.+-.|++||
T Consensus 626 qK~~IV~~lq~~-g----~vVamtGDGvN-D-apALk~ADVGIamg~---~Gtdaak~Aad 676 (917)
T COG0474 626 QKARIVEALQKS-G----HVVAMTGDGVN-D-APALKAADVGIAMGG---EGTDAAKEAAD 676 (917)
T ss_pred HHHHHHHHHHhC-C----CEEEEeCCCch-h-HHHHHhcCccEEecc---cHHHHHHhhcc
Confidence 477777776654 3 46777899999 9 999999999999992 58888889988
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.12 E-value=4.7 Score=48.53 Aligned_cols=83 Identities=14% Similarity=0.147 Sum_probs=53.2
Q ss_pred CCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCC----ch-hhhccCCcEEEeCC-
Q 001705 546 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG----PV-DILKALNNGLLVDP- 619 (1024)
Q Consensus 546 ~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg----~~-eii~~~~~Gllv~p- 619 (1024)
+++.+.++.|+.+ +++.. ..++||. .-| -.+++||+.+|+|+|+-...+ .. .+++..+.|+.++.
T Consensus 342 ~~g~v~~W~PQ~~---iL~H~--~v~~Fvt---H~G-~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~ 412 (481)
T PLN02554 342 DIGKVIGWAPQVA---VLAKP--AIGGFVT---HCG-WNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKY 412 (481)
T ss_pred cCceEEeeCCHHH---HhCCc--ccCcccc---cCc-cchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeecc
Confidence 4556668888764 44332 1145552 123 358899999999999976432 12 33444566777641
Q ss_pred ------------CCHHHHHHHHHHHHh-CHH
Q 001705 620 ------------HDQNAIADALLKLLA-DKN 637 (1024)
Q Consensus 620 ------------~d~~~la~aI~~ll~-d~~ 637 (1024)
-+.++++++|.+++. +++
T Consensus 413 ~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~ 443 (481)
T PLN02554 413 WRGDLLAGEMETVTAEEIERGIRCLMEQDSD 443 (481)
T ss_pred ccccccccccCeEcHHHHHHHHHHHhcCCHH
Confidence 268899999999996 543
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.021 Score=69.63 Aligned_cols=41 Identities=7% Similarity=0.127 Sum_probs=37.4
Q ss_pred hhhHHHHHHHHHHHhhccCCCCe-EEEEECCCCHHHHHHHHHhcCC
Q 001705 765 ETFQATIKNVMKAAGLSLGLGRV-GFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 765 ~~i~~~~~~~l~~l~~~~~~~gi-~~viaTGR~~~~~~~~l~~~~i 809 (1024)
..+-+..+++|++|++. |+ .++++||.+...+..+++.+|+
T Consensus 361 d~l~~~~~e~i~~L~~~----Gi~~v~vvTgd~~~~a~~i~~~lgi 402 (536)
T TIGR01512 361 DEPRPDAAEAIAELKAL----GIEKVVMLTGDRRAVAERVARELGI 402 (536)
T ss_pred ccchHHHHHHHHHHHHc----CCCcEEEEcCCCHHHHHHHHHHcCC
Confidence 45778999999999988 99 9999999999999999999776
|
. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.026 Score=60.37 Aligned_cols=43 Identities=9% Similarity=0.013 Sum_probs=38.0
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEec
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILR 972 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMg 972 (1024)
.+...++.+++++|++++++++| ||+.+ | +++-+.+|..++.-
T Consensus 149 p~~~~~~~~~~~~~~~~~~~~~i-gDs~~-D-i~aA~~aG~~~i~v 191 (222)
T PRK10826 149 PHPEVYLNCAAKLGVDPLTCVAL-EDSFN-G-MIAAKAARMRSIVV 191 (222)
T ss_pred CCHHHHHHHHHHcCCCHHHeEEE-cCChh-h-HHHHHHcCCEEEEe
Confidence 45678999999999999999996 99999 9 99999999776555
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.012 Score=62.07 Aligned_cols=55 Identities=13% Similarity=0.244 Sum_probs=46.2
Q ss_pred CCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCC
Q 001705 924 SFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFK 990 (1024)
Q Consensus 924 ~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~ 990 (1024)
..-.|...++.+. ..+. +++++ ||+.| | ++|++.+|.+|+|. |.|.+++.|+..+
T Consensus 129 ~~~~K~~~l~~l~-~~~~---~~v~v-GDs~n-D-l~ml~~Ag~~ia~~-----ak~~~~~~~~~~~ 183 (203)
T TIGR02137 129 QKDPKRQSVIAFK-SLYY---RVIAA-GDSYN-D-TTMLSEAHAGILFH-----APENVIREFPQFP 183 (203)
T ss_pred CcchHHHHHHHHH-hhCC---CEEEE-eCCHH-H-HHHHHhCCCCEEec-----CCHHHHHhCCCCC
Confidence 3457999999884 5554 58885 99999 9 99999999999998 9999999999533
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.031 Score=73.47 Aligned_cols=41 Identities=17% Similarity=0.357 Sum_probs=37.6
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCC
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVN 810 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~ 810 (1024)
.+.+.++++|+++++. ||+++++||.+...+..+.+++||-
T Consensus 656 ~lr~~~~~~I~~l~~a----gi~v~miTGD~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRA----SIRTVMITGDNPLTAVHVARECGIV 696 (1054)
T ss_pred CCCccHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCCC
Confidence 4668899999999997 9999999999999999999999983
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.011 Score=57.80 Aligned_cols=55 Identities=11% Similarity=0.144 Sum_probs=45.3
Q ss_pred EEEecCCCCCCC--------chhhHHHHHHHHHHHhhccCCCCeEEEEECCCC--------HHHHHHHHHhcCCC
Q 001705 752 IAADCYDSDGNT--------TETFQATIKNVMKAAGLSLGLGRVGFILVTGSS--------LGETMEAIRRCTVN 810 (1024)
Q Consensus 752 Ia~DlDGTl~~~--------~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~--------~~~~~~~l~~~~i~ 810 (1024)
+++|+||||.+. ...+.+.+.++|++|+++ |+.++|+|+++ ...+..+++.+++.
T Consensus 3 ~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~----g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~ 73 (132)
T TIGR01662 3 VVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEA----GYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP 73 (132)
T ss_pred EEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHC----CCEEEEEECCccccccHHHHHHHHHHHHHCCCC
Confidence 459999997741 234568889999999987 99999999999 77888999998773
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.0078 Score=64.18 Aligned_cols=53 Identities=19% Similarity=0.234 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccc
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad 987 (1024)
.|...++.+++++++++++++++ ||+.+ | ++|++.+|.+++|+ +.+.+++.|+
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~i-GDs~~-D-i~aa~~ag~~i~~~-----~~~~~~~~a~ 204 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVAV-GDGAN-D-LSMIKAAGLGIAFN-----AKPKLQQKAD 204 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEEE-ECCHH-H-HHHHHhCCCeEEeC-----CCHHHHHhch
Confidence 48999999999999999999996 99999 9 99999999999986 6778888888
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.011 Score=55.07 Aligned_cols=54 Identities=11% Similarity=-0.002 Sum_probs=42.2
Q ss_pred EEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECC---CCHHHHHHHHHhcCCC
Q 001705 752 IAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTG---SSLGETMEAIRRCTVN 810 (1024)
Q Consensus 752 Ia~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTG---R~~~~~~~~l~~~~i~ 810 (1024)
+.+|+||||.+. ..+.+...++|++|++. |..|++.|- |+.......|+.+|++
T Consensus 1 ~l~D~dGvl~~g-~~~ipga~e~l~~L~~~----g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 1 FLFDLDGVLYNG-NEPIPGAVEALDALRER----GKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp EEEESTTTSEET-TEE-TTHHHHHHHHHHT----TSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred CEEeCccEeEeC-CCcCcCHHHHHHHHHHc----CCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 358999997775 45677889999999998 888888874 5666777788888886
|
... |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.0071 Score=63.35 Aligned_cols=54 Identities=13% Similarity=0.097 Sum_probs=45.8
Q ss_pred CCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccc
Q 001705 926 ASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 926 asKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad 987 (1024)
-+|+.+++.+++++|+++++++++ ||+.+ | ++|++.+|.++|+. +.+.+.+.|.
T Consensus 146 ~~k~~~~~~~~~~~~~~~~~~i~i-GDs~~-D-~~~a~~ag~~~a~~-----~~~~~~~~a~ 199 (201)
T TIGR01491 146 DNKGEAVERLKRELNPSLTETVAV-GDSKN-D-LPMFEVADISISLG-----DEGHADYLAK 199 (201)
T ss_pred ccHHHHHHHHHHHhCCCHHHEEEE-cCCHh-H-HHHHHhcCCeEEEC-----CCccchhhcc
Confidence 469999999999999999999996 99999 9 99999999999997 3444554443
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.015 Score=59.36 Aligned_cols=64 Identities=13% Similarity=0.079 Sum_probs=45.1
Q ss_pred EEEEecCCCCCCCch-h-----------hHHHHHHHHHHHhhccCCCCeEEEEECCCCH------------HHHHHHHHh
Q 001705 751 VIAADCYDSDGNTTE-T-----------FQATIKNVMKAAGLSLGLGRVGFILVTGSSL------------GETMEAIRR 806 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~-~-----------i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~------------~~~~~~l~~ 806 (1024)
++++|+||||....+ . +-+.+.++|++|+++ |+.++|+|..+. ..+..+++.
T Consensus 15 ~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~ 90 (166)
T TIGR01664 15 VAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDE----GYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK 90 (166)
T ss_pred EEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHC----CCEEEEEeCCcccccCcccHHHHHHHHHHHHHH
Confidence 345899999665322 1 126788999999987 999999996543 246778899
Q ss_pred cCCCCCCCCEEEecC
Q 001705 807 CTVNIEDFDAIVCNS 821 (1024)
Q Consensus 807 ~~i~~~~~d~lI~~n 821 (1024)
+|+. ++.+|+.+
T Consensus 91 ~gl~---~~~ii~~~ 102 (166)
T TIGR01664 91 LKVP---IQVLAATH 102 (166)
T ss_pred cCCC---EEEEEecC
Confidence 8884 34555544
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.069 Score=53.51 Aligned_cols=74 Identities=16% Similarity=0.139 Sum_probs=43.2
Q ss_pred cceEEEEcCC-ChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCC
Q 001705 304 WPYVIHGHYA-DAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTST 382 (1024)
Q Consensus 304 ~pDvIh~h~~-~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S 382 (1024)
.+|+|.+.+. +...+-.+.....++|.++.+|.-. +......+.. ++.. |.+... ...-.||.|++.|
T Consensus 59 ~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQ---l~YP~~~~~~-rd~~--~~~~ni-----~saLaAD~v~FNS 127 (168)
T PF12038_consen 59 SYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQ---LAYPVSPGQE-RDFQ--YGMNNI-----YSALAADRVVFNS 127 (168)
T ss_pred CCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCc---ccCCCCCCcc-cccc--HHHHHH-----HHHHhceeeeecc
Confidence 5799998875 5555555555556899999999631 1111111111 1222 222221 1234899999999
Q ss_pred HHHHHH
Q 001705 383 RQEIEM 388 (1024)
Q Consensus 383 ~~~~~~ 388 (1024)
...++.
T Consensus 128 ~~nr~s 133 (168)
T PF12038_consen 128 AFNRDS 133 (168)
T ss_pred hhhHHH
Confidence 877665
|
It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.011 Score=62.73 Aligned_cols=41 Identities=20% Similarity=0.180 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEe
Q 001705 928 RIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLIL 971 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaM 971 (1024)
+...+..+++++|++++++++| ||+.+ | +.+-+.+|..++.
T Consensus 143 ~p~~~~~~~~~~~~~~~~~~~i-gDs~~-d-~~aa~~aG~~~i~ 183 (213)
T TIGR01449 143 HPDPLLLAAERLGVAPQQMVYV-GDSRV-D-IQAARAAGCPSVL 183 (213)
T ss_pred ChHHHHHHHHHcCCChhHeEEe-CCCHH-H-HHHHHHCCCeEEE
Confidence 4678999999999999999996 99999 9 9999999976653
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.04 Score=59.53 Aligned_cols=36 Identities=8% Similarity=0.113 Sum_probs=30.8
Q ss_pred HHHHHHHHhhccCCCCeEEEEECCC----CHHHHHHHHHhcCCC
Q 001705 771 IKNVMKAAGLSLGLGRVGFILVTGS----SLGETMEAIRRCTVN 810 (1024)
Q Consensus 771 ~~~~l~~l~~~~~~~gi~~viaTGR----~~~~~~~~l~~~~i~ 810 (1024)
.+++|+.++++ |+.++++|+| .-..+..+++.+|++
T Consensus 119 a~elL~~l~~~----G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 119 ARQLIDMHQRR----GDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred HHHHHHHHHHC----CCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 67888889887 9999999999 556788888888884
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.076 Score=56.42 Aligned_cols=44 Identities=7% Similarity=-0.080 Sum_probs=38.1
Q ss_pred CCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEE
Q 001705 924 SFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLI 970 (1024)
Q Consensus 924 ~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVa 970 (1024)
..-.|...++++++++|++++++++| ||+.+ | +.+-+.+|..++
T Consensus 136 ~~Kp~p~~~~~~~~~~~~~~~~~~~i-GDs~~-D-i~aa~~aG~~~i 179 (214)
T PRK13288 136 HAKPDPEPVLKALELLGAKPEEALMV-GDNHH-D-ILAGKNAGTKTA 179 (214)
T ss_pred CCCCCcHHHHHHHHHcCCCHHHEEEE-CCCHH-H-HHHHHHCCCeEE
Confidence 34457889999999999999999996 99999 9 999999997654
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.052 Score=66.50 Aligned_cols=100 Identities=16% Similarity=0.254 Sum_probs=68.9
Q ss_pred hhhHHHHHHHHHhcCCeEEEEEecCC-------------eEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCC
Q 001705 891 TRKVDNIRQRLRMRGFRCNLVYTRAG-------------SRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTD 957 (1024)
Q Consensus 891 ~~~~~el~~~L~~~~~~~~v~~s~~~-------------~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D 957 (1024)
.+.+.+.-+.|+..+..+.++.+.+. .+-++.| -.|...++.+.. +.+++++ +||+.| |
T Consensus 407 ~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~~~~~~~p--~~K~~~v~~l~~----~~~~v~~-VGDg~n-D 478 (562)
T TIGR01511 407 RPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGINVRAEVLP--DDKAALIKELQE----KGRVVAM-VGDGIN-D 478 (562)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcEEccCCh--HHHHHHHHHHHH----cCCEEEE-EeCCCc-c
Confidence 34456666777777766654433221 1233434 268777777765 3456766 599999 9
Q ss_pred hHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHH
Q 001705 958 YEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALK 1019 (1024)
Q Consensus 958 ~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~ 1019 (1024)
.+|++.++.||+|| ++.+..+..|| ++..+.+-++|..+++
T Consensus 479 -~~al~~A~vgia~g----~g~~~a~~~Ad----------------vvl~~~~l~~l~~~i~ 519 (562)
T TIGR01511 479 -APALAQADVGIAIG----AGTDVAIEAAD----------------VVLMRNDLNDVATAID 519 (562)
T ss_pred -HHHHhhCCEEEEeC----CcCHHHHhhCC----------------EEEeCCCHHHHHHHHH
Confidence 99999999999999 88877788888 6655556677776653
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.095 Score=63.91 Aligned_cols=152 Identities=14% Similarity=0.160 Sum_probs=87.2
Q ss_pred HHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCCccccCcchhhhhcccCCchhHH
Q 001705 773 NVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYEAHVEYRWPGENVR 852 (1024)
Q Consensus 773 ~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~~~~~d~~~~~~i~~~w~~~~v~ 852 (1024)
+++.+.++. ||+++..||+....++.+.++.|| |. -|+++. +
T Consensus 597 ~Av~~CrsA----GIkvimVTgdhpiTAkAiA~~vgI--------i~-~~~et~-------------------------e 638 (1019)
T KOG0203|consen 597 DAVGKCRSA----GIKVIMVTGDHPITAKAIAKSVGI--------IS-EGSETV-------------------------E 638 (1019)
T ss_pred hhhhhhhhh----CceEEEEecCccchhhhhhhheee--------ec-CCchhh-------------------------h
Confidence 777888887 999999999999999999998664 12 122111 1
Q ss_pred HHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCCCCHHHHH
Q 001705 853 SVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQAL 932 (1024)
Q Consensus 853 ~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL 932 (1024)
.+..+.... ..+........++. + ..+...-.-+++.+.|..+. ..-...+.+...+=|+-
T Consensus 639 ~~a~r~~~~-------v~~vn~~~a~a~Vi-h-G~eL~~~~~~qld~il~nh~-eIVFARTSPqQKLiIVe--------- 699 (1019)
T KOG0203|consen 639 DIAKRLNIP-------VEQVNSRDAKAAVI-H-GSELPDMSSEQLDELLQNHQ-EIVFARTSPQQKLIIVE--------- 699 (1019)
T ss_pred hhHHhcCCc-------ccccCccccceEEE-e-cccccccCHHHHHHHHHhCC-ceEEEecCccceEEeEh---------
Confidence 111111110 00000011122222 2 22222223456666666542 23333444443555543
Q ss_pred HHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCC-hHHHhcccccCCCCC
Q 001705 933 RYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYG-SEKLLHGEDAFKRED 993 (1024)
Q Consensus 933 ~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA-~~elk~~ad~~~~~~ 993 (1024)
=|++.|- +|+..||+-| | -+-|+.++.||||| =| ++--|++||=.-++|
T Consensus 700 --~cQr~Ga----iVaVTGDGVN-D-sPALKKADIGVAMG----iaGSDvsKqAADmILLDD 749 (1019)
T KOG0203|consen 700 --GCQRQGA----IVAVTGDGVN-D-SPALKKADIGVAMG----IAGSDVSKQAADMILLDD 749 (1019)
T ss_pred --hhhhcCc----EEEEeCCCcC-C-Chhhcccccceeec----cccchHHHhhcceEEecC
Confidence 2666664 6776799999 9 99999999999998 44 444478888444433
|
|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.053 Score=67.29 Aligned_cols=148 Identities=14% Similarity=0.133 Sum_probs=105.4
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHhhccccCCCC-----cEEEEEecCCCcccccccchHHHHHHHHHHH----Hc
Q 001705 473 TNPHKPTILALSRPDPKKNVTT-LLKAFGECQPLRELA-----NMTLILGNRDDIEDMSNSSSVVLTTVLKLID----KY 542 (1024)
Q Consensus 473 ~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~l~~~~-----~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~----~~ 542 (1024)
.+|+..+++++-|+...|.... ++..+.++..+...| ..++|.|+...... ......+..|...++ ..
T Consensus 539 ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y--~~aK~iIk~I~~va~~in~Dp 616 (815)
T PRK14986 539 VNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAY--YMAKHIIHLINDVAKVINNDP 616 (815)
T ss_pred cCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCc--HHHHHHHHHHHHHHHHhccCh
Confidence 4678889999999999998887 776655554444443 35565544322111 123456667777766 23
Q ss_pred CCCC--CEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhcc--CCcEEE
Q 001705 543 DLYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAL--VEPFGLTIIEAAAYGLPVVATKNGGPVDILKA--LNNGLL 616 (1024)
Q Consensus 543 ~l~~--~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~--~~~Gll 616 (1024)
.+.+ +|.|+.-..-+--..++..| ||-.+.|. .|..|..=+-+|.-|.+.++|..|+..|+.++ +.||+.
T Consensus 617 ~v~~~lkVVFlenY~vslAe~lipg~----Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~ 692 (815)
T PRK14986 617 QIGDKLKVVFIPNYSVSLAQLIIPAA----DLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFI 692 (815)
T ss_pred hhcCceeEEEeCCCCHHHHHHhhhhh----hhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEE
Confidence 3444 68888776555555666666 99999887 59999999999999999999999999999986 789999
Q ss_pred eCCCCHHHHHH
Q 001705 617 VDPHDQNAIAD 627 (1024)
Q Consensus 617 v~p~d~~~la~ 627 (1024)
+- .+.+++.+
T Consensus 693 fG-~~~~ev~~ 702 (815)
T PRK14986 693 FG-NTAEEVEA 702 (815)
T ss_pred eC-CCHHHHHH
Confidence 95 35655544
|
|
| >PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.071 Score=47.39 Aligned_cols=71 Identities=18% Similarity=0.188 Sum_probs=45.1
Q ss_pred CCCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC--hHHHHHHHHccC
Q 001705 249 SCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYAD--AGEVAAHLSGAL 326 (1024)
Q Consensus 249 ~~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~--~~~~a~~l~~~~ 326 (1024)
.+|.+++.+|..+. .+....|-+-.+.. .++ ..+.+ .+.||||+|... .+.-+.+.++.+
T Consensus 13 tngLKVYYlP~~~~----~~~~t~Pt~~~~~p----l~R---~Ilir-------E~I~IVHgH~a~S~l~hE~i~hA~~m 74 (90)
T PF08288_consen 13 TNGLKVYYLPLKVF----YNQCTLPTLFGSFP----LLR---NILIR-------ERIDIVHGHQAFSTLCHEAILHARTM 74 (90)
T ss_pred CCCeEEEeecchhh----hcCcchHHHHHhhH----HHH---HHHHH-------cCeeEEEeehhhhHHHHHHHHHHHhC
Confidence 45999999997553 23333343222111 111 11111 378999999873 455577778889
Q ss_pred CCCEEEEeCCC
Q 001705 327 NVPMVLTGHSL 337 (1024)
Q Consensus 327 ~ipiV~t~H~l 337 (1024)
|++.|||-||+
T Consensus 75 GlktVfTDHSL 85 (90)
T PF08288_consen 75 GLKTVFTDHSL 85 (90)
T ss_pred CCcEEeecccc
Confidence 99999999987
|
These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.25 Score=53.88 Aligned_cols=41 Identities=7% Similarity=-0.043 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEE
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLI 970 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVa 970 (1024)
-+...+.+.++++|++++++++| ||+.. | +..=+.+|..++
T Consensus 165 P~p~~~~~a~~~~~~~~~~~l~v-gDs~~-D-i~aA~~aGi~~i 205 (248)
T PLN02770 165 PHPDPYLKALEVLKVSKDHTFVF-EDSVS-G-IKAGVAAGMPVV 205 (248)
T ss_pred CChHHHHHHHHHhCCChhHEEEE-cCCHH-H-HHHHHHCCCEEE
Confidence 34567899999999999999996 99999 9 888888887654
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.093 Score=65.15 Aligned_cols=98 Identities=15% Similarity=0.260 Sum_probs=73.4
Q ss_pred hhHHHHHHHHHhcCCeEEEEEecCC---------------eEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCC
Q 001705 892 RKVDNIRQRLRMRGFRCNLVYTRAG---------------SRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDT 956 (1024)
Q Consensus 892 ~~~~el~~~L~~~~~~~~v~~s~~~---------------~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~ 956 (1024)
+...+.-+.|+..+.+ .++.++++ .+=|++|. .|...++.|.++. +.++||||+-|
T Consensus 540 ~~a~~aI~~L~~~Gi~-~~mLTGDn~~~A~~iA~~lGId~v~AellPe--dK~~~V~~l~~~g-----~~VamVGDGIN- 610 (713)
T COG2217 540 PDAKEAIAALKALGIK-VVMLTGDNRRTAEAIAKELGIDEVRAELLPE--DKAEIVRELQAEG-----RKVAMVGDGIN- 610 (713)
T ss_pred hhHHHHHHHHHHCCCe-EEEEcCCCHHHHHHHHHHcChHhheccCCcH--HHHHHHHHHHhcC-----CEEEEEeCCch-
Confidence 3455666778888877 44555543 24577775 5999999987533 46777899999
Q ss_pred ChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHH
Q 001705 957 DYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALK 1019 (1024)
Q Consensus 957 D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~ 1019 (1024)
| -+-|..+..||||| .+++-.+++|| .+--..+-..|..+++
T Consensus 611 D-APALA~AdVGiAmG----~GtDvA~eaAD----------------vvL~~~dL~~v~~ai~ 652 (713)
T COG2217 611 D-APALAAADVGIAMG----SGTDVAIEAAD----------------VVLMRDDLSAVPEAID 652 (713)
T ss_pred h-HHHHhhcCeeEeec----CCcHHHHHhCC----------------EEEecCCHHHHHHHHH
Confidence 9 99999999999999 89998899999 4444556667777664
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=95.06 E-value=11 Score=45.38 Aligned_cols=94 Identities=18% Similarity=0.237 Sum_probs=59.8
Q ss_pred CCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCC----chh-hhccCCcEEEeC--
Q 001705 546 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG----PVD-ILKALNNGLLVD-- 618 (1024)
Q Consensus 546 ~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg----~~e-ii~~~~~Gllv~-- 618 (1024)
+++.+.++.|+.+ ++... ..++||.- -| -.+++||+.+|+|+|+-..-+ ... +++..+.|+.+.
T Consensus 337 ~~g~v~~W~PQ~~---iL~H~--~v~~FvtH---~G-~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~ 407 (480)
T PLN02555 337 DKGKIVQWCPQEK---VLAHP--SVACFVTH---CG-WNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRG 407 (480)
T ss_pred CceEEEecCCHHH---HhCCC--ccCeEEec---CC-cchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCC
Confidence 4666678888765 44332 11566632 23 468899999999999976433 122 223336677772
Q ss_pred ---C--CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 001705 619 ---P--HDQNAIADALLKLLADKNMWSECRKNGLKN 649 (1024)
Q Consensus 619 ---p--~d~~~la~aI~~ll~d~~~~~~~~~~~~~~ 649 (1024)
. -+.++++++|.+++.+++ .+++++++++.
T Consensus 408 ~~~~~~v~~~~v~~~v~~vm~~~~-g~~~r~ra~~l 442 (480)
T PLN02555 408 EAENKLITREEVAECLLEATVGEK-AAELKQNALKW 442 (480)
T ss_pred ccccCcCcHHHHHHHHHHHhcCch-HHHHHHHHHHH
Confidence 1 257899999999997643 45666666553
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.02 E-value=11 Score=45.34 Aligned_cols=93 Identities=14% Similarity=0.204 Sum_probs=57.6
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCC----chh-hhccCCcEEEeCC---
Q 001705 548 VAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG----PVD-ILKALNNGLLVDP--- 619 (1024)
Q Consensus 548 V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg----~~e-ii~~~~~Gllv~p--- 619 (1024)
+.+.++.|+. +++..++ .++||.- -|+ .+++||+++|+|+|+-..-+ ... +++..+.|+.++.
T Consensus 341 ~~v~~w~PQ~---~iL~h~~--vg~fvtH---~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~ 411 (480)
T PLN00164 341 LVWPTWAPQK---EILAHAA--VGGFVTH---CGW-NSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRK 411 (480)
T ss_pred eEEeecCCHH---HHhcCcc--cCeEEee---ccc-chHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccc
Confidence 5566787776 4555551 1345522 233 58899999999999965322 222 2334466877742
Q ss_pred ----CCHHHHHHHHHHHHhCHH-HHHHHHHHHHHH
Q 001705 620 ----HDQNAIADALLKLLADKN-MWSECRKNGLKN 649 (1024)
Q Consensus 620 ----~d~~~la~aI~~ll~d~~-~~~~~~~~~~~~ 649 (1024)
-+.++++++|.+++.+++ +.+++++++.+.
T Consensus 412 ~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~ 446 (480)
T PLN00164 412 RDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEM 446 (480)
T ss_pred cCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 257999999999997643 344555544443
|
|
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.79 Score=53.07 Aligned_cols=110 Identities=12% Similarity=0.215 Sum_probs=65.5
Q ss_pred CCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEc--CC-------CCchhhhccCCc
Q 001705 543 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVAT--KN-------GGPVDILKALNN 613 (1024)
Q Consensus 543 ~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat--~~-------Gg~~eii~~~~~ 613 (1024)
...++|.+... ..++.+++..| |++|- -++-++.|++.+++|||-. +. |...++ .....
T Consensus 249 ~~~~~i~~~~~--~~~~~~ll~~a----DiLIT-----DySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~-~~~~p 316 (369)
T PF04464_consen 249 EDNSNIIFVSD--NEDIYDLLAAA----DILIT-----DYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDY-EEDLP 316 (369)
T ss_dssp T-TTTEEE-TT---S-HHHHHHT-----SEEEE-----SS-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-T-TTSSS
T ss_pred ccCCcEEECCC--CCCHHHHHHhc----CEEEE-----echhHHHHHHHhCCCEEEEeccHHHHhhccCCCCch-HhhCC
Confidence 34467776555 34899999999 89873 3567899999999999954 22 333332 22345
Q ss_pred EEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 001705 614 GLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHV 666 (1024)
Q Consensus 614 Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~ 666 (1024)
|-++. +.++|.++|..++.++...++.++...+..-.|.=...|++..+.+
T Consensus 317 g~~~~--~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Dg~s~eri~~~I 367 (369)
T PF04464_consen 317 GPIVY--NFEELIEAIENIIENPDEYKEKREKFRDKFFKYNDGNSSERIVNYI 367 (369)
T ss_dssp S-EES--SHHHHHHHHTTHHHHHHHTHHHHHHHHHHHSTT--S-HHHHHHHHH
T ss_pred CceeC--CHHHHHHHHHhhhhCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHH
Confidence 66775 8999999999999877665555555555443344445566665554
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.069 Score=57.08 Aligned_cols=40 Identities=8% Similarity=-0.011 Sum_probs=33.6
Q ss_pred hHHHHHHHHHHHhhccCCCCeEEEEECCCCHHH---HHHHHHhcCCC
Q 001705 767 FQATIKNVMKAAGLSLGLGRVGFILVTGSSLGE---TMEAIRRCTVN 810 (1024)
Q Consensus 767 i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~---~~~~l~~~~i~ 810 (1024)
..+.++++++.++++ |+.++++|||+... +...|...|++
T Consensus 121 aip~al~l~~~l~~~----G~~Vf~lTGR~e~~r~~T~~nL~~~G~~ 163 (229)
T TIGR01675 121 ALPEGLKLYQKIIEL----GIKIFLLSGRWEELRNATLDNLINAGFT 163 (229)
T ss_pred CCHHHHHHHHHHHHC----CCEEEEEcCCChHHHHHHHHHHHHcCCC
Confidence 346788899999987 99999999999766 77888888874
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.042 Score=59.72 Aligned_cols=64 Identities=9% Similarity=0.016 Sum_probs=47.5
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHH--HHHHHHhcCCCCCCCCEEEe
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGE--TMEAIRRCTVNIEDFDAIVC 819 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~--~~~~l~~~~i~~~~~d~lI~ 819 (1024)
.+.+|+|||+.+. ..+.+...++|++|+++ |+.++++|..+... +.+.++.+|++...++.+++
T Consensus 10 ~~~~D~dG~l~~~-~~~~pga~e~L~~L~~~----G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~ 75 (242)
T TIGR01459 10 VFLLDLWGVIIDG-NHTYPGAVQNLNKIIAQ----GKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIIS 75 (242)
T ss_pred EEEEecccccccC-CccCccHHHHHHHHHHC----CCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEc
Confidence 4558999997765 34568999999999987 99999976655443 44788999986214666655
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=94.69 E-value=13 Score=44.65 Aligned_cols=140 Identities=12% Similarity=0.172 Sum_probs=76.3
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCC
Q 001705 476 HKPTILALSRPD--PKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKH 553 (1024)
Q Consensus 476 ~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~ 553 (1024)
+.++.+++|.+. ..+.+..++.+++.+. ..+..+++..... ........-..+.+.+ .++..+.++
T Consensus 280 ~svvyvsfGS~~~~~~~~~~ela~~l~~~~-----~~flw~~~~~~~~--~~~~~~~lp~~~~er~-----~~rg~v~~w 347 (475)
T PLN02167 280 SSVVFLCFGSLGSLPAPQIKEIAQALELVG-----CRFLWSIRTNPAE--YASPYEPLPEGFMDRV-----MGRGLVCGW 347 (475)
T ss_pred CceEEEeecccccCCHHHHHHHHHHHHhCC-----CcEEEEEecCccc--ccchhhhCChHHHHHh-----ccCeeeecc
Confidence 346777888763 3345677777776662 2343455432110 0000000001111111 134455688
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc----h-hhhccCCcEEEeCC---------
Q 001705 554 HKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----V-DILKALNNGLLVDP--------- 619 (1024)
Q Consensus 554 ~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~----~-eii~~~~~Gllv~p--------- 619 (1024)
+|+. +++... ..++||.- -|+ .+++||+++|+|+|+-...+= . -++...+.|+.+..
T Consensus 348 ~PQ~---~iL~h~--~vg~fvtH---~G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~ 418 (475)
T PLN02167 348 APQV---EILAHK--AIGGFVSH---CGW-NSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEI 418 (475)
T ss_pred CCHH---HHhcCc--ccCeEEee---CCc-ccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCc
Confidence 7776 455554 12566632 233 478999999999998764332 1 12444466877642
Q ss_pred CCHHHHHHHHHHHHhCH
Q 001705 620 HDQNAIADALLKLLADK 636 (1024)
Q Consensus 620 ~d~~~la~aI~~ll~d~ 636 (1024)
-+.++++++|.+++.++
T Consensus 419 ~~~~~l~~av~~~m~~~ 435 (475)
T PLN02167 419 VKADEIAGAVRSLMDGE 435 (475)
T ss_pred ccHHHHHHHHHHHhcCC
Confidence 26889999999999754
|
|
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.14 Score=63.79 Aligned_cols=148 Identities=15% Similarity=0.142 Sum_probs=104.3
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHhhccccCCCC-----cEEEEEecCCCcccccccchHHHHHHHHHHHH----c
Q 001705 473 TNPHKPTILALSRPDPKKNVTT-LLKAFGECQPLRELA-----NMTLILGNRDDIEDMSNSSSVVLTTVLKLIDK----Y 542 (1024)
Q Consensus 473 ~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~l~~~~-----~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~----~ 542 (1024)
.+|+..+++++-|+...|.... ++..+.++..+...| ..++|.|+-..... ......+..|...++. .
T Consensus 526 ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y--~~aK~iIklI~~va~~in~Dp 603 (797)
T cd04300 526 VDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGY--YMAKLIIKLINAVADVVNNDP 603 (797)
T ss_pred cCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCc--HHHHHHHHHHHHHHHHhccCh
Confidence 3688899999999999998888 666655554444443 25565554332211 1223456666666663 2
Q ss_pred CCCC--CEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhcc--CCcEEE
Q 001705 543 DLYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAL--VEPFGLTIIEAAAYGLPVVATKNGGPVDILKA--LNNGLL 616 (1024)
Q Consensus 543 ~l~~--~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~--~~~Gll 616 (1024)
.+.+ +|.|+.-..-+--..++.+| ||-.+.|. .|..|..=+-+|.-|.+.|+|..|+..|+.+. .+|+++
T Consensus 604 ~v~~~lkVVFlenY~VslAe~iipaa----Dvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fi 679 (797)
T cd04300 604 DVGDKLKVVFLPNYNVSLAEKIIPAA----DLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFI 679 (797)
T ss_pred hcCCceEEEEeCCCChHHHHHhhhhh----hhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEE
Confidence 3444 68888776555555666666 99998876 59999999999999999999999999999977 789999
Q ss_pred eCCCCHHHHHH
Q 001705 617 VDPHDQNAIAD 627 (1024)
Q Consensus 617 v~p~d~~~la~ 627 (1024)
|- .+.+++.+
T Consensus 680 FG-~~~~ev~~ 689 (797)
T cd04300 680 FG-LTAEEVEA 689 (797)
T ss_pred eC-CCHHHHHH
Confidence 95 35555543
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=94.58 E-value=14 Score=44.49 Aligned_cols=93 Identities=18% Similarity=0.141 Sum_probs=55.6
Q ss_pred CEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchh-----hhccCCcEEEeC---
Q 001705 547 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVD-----ILKALNNGLLVD--- 618 (1024)
Q Consensus 547 ~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~e-----ii~~~~~Gllv~--- 618 (1024)
.+.+.+++|+. +++...+ .+.||. -+-..+++||+++|+|+|+-...+-.- +++....|+-+.
T Consensus 345 g~~v~~w~pq~---~iL~h~~--v~~fvt----H~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~ 415 (491)
T PLN02534 345 GLLIKGWAPQV---LILSHPA--IGGFLT----HCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEV 415 (491)
T ss_pred CeeccCCCCHH---HHhcCCc--cceEEe----cCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccc
Confidence 56677898885 4555551 123553 233478999999999999976533211 222333444431
Q ss_pred ------------CCCHHHHHHHHHHHHhC-HHHHHHHHHHHHH
Q 001705 619 ------------PHDQNAIADALLKLLAD-KNMWSECRKNGLK 648 (1024)
Q Consensus 619 ------------p~d~~~la~aI~~ll~d-~~~~~~~~~~~~~ 648 (1024)
--+.+++++++++++.+ .++-+++++++.+
T Consensus 416 ~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~e 458 (491)
T PLN02534 416 PVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQE 458 (491)
T ss_pred cccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHH
Confidence 02578999999999962 2223444444443
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=94.39 E-value=0.11 Score=51.97 Aligned_cols=52 Identities=8% Similarity=0.090 Sum_probs=41.2
Q ss_pred EEEecCCCCCCCch-----------hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHH---HHHHHHhc
Q 001705 752 IAADCYDSDGNTTE-----------TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGE---TMEAIRRC 807 (1024)
Q Consensus 752 Ia~DlDGTl~~~~~-----------~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~---~~~~l~~~ 807 (1024)
|.+|+|||+..+|. ...+.+.++.++++++ |.+|+..|+|+... .+.||...
T Consensus 2 VvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~----GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 2 VVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADN----GYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred EEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHC----CeEEEEECcCcHHHHHHHHHHHHHH
Confidence 56999999665431 4567788999999988 99999999999764 56788876
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.38 Score=63.58 Aligned_cols=40 Identities=10% Similarity=0.261 Sum_probs=36.5
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
++.+.+.++|+.|++. ||++.+.||=....+..+..+.|+
T Consensus 631 ~lq~~v~etI~~L~~A----GIkv~mlTGD~~~TA~~IA~~~~i 670 (1057)
T TIGR01652 631 KLQEGVPETIELLRQA----GIKIWVLTGDKVETAINIGYSCRL 670 (1057)
T ss_pred hhhhccHHHHHHHHHC----CCeEEEEcCCcHHHHHHHHHHhCC
Confidence 4667888999999987 999999999999999999999887
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=94.18 E-value=0.44 Score=50.64 Aligned_cols=42 Identities=14% Similarity=0.138 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCCC-CCChHHhhcCCCce-EEec
Q 001705 928 RIQALRYLSIRWGIDLSKMVVFVGEKG-DTDYEDLLVGLHKT-LILR 972 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~~~~vvafiGDs~-N~D~~~Ml~~ag~g-VaMg 972 (1024)
+......+++++|+++++++++ ||+. + | +..=+.+|.. |.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~i-gDs~~~-d-i~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 152 HPKIFYAALKRLGVKPEEAVMV-GDRLDK-D-IKGAKNLGMKTVWIN 195 (221)
T ss_pred CHHHHHHHHHHcCCChhhEEEE-CCChHH-H-HHHHHHCCCEEEEEC
Confidence 4568899999999999999996 9997 8 9 8888888874 4444
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=94.17 E-value=0.047 Score=56.60 Aligned_cols=38 Identities=11% Similarity=0.154 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCC
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVN 810 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~ 810 (1024)
+.+.+.|+.++++ |+.++|+||-+...+..+++.++++
T Consensus 92 ~~~~e~i~~~~~~----~~~v~IvS~~~~~~i~~~~~~~~i~ 129 (192)
T PF12710_consen 92 PDAMELIRELKDN----GIKVVIVSGSPDEIIEPIAERLGID 129 (192)
T ss_dssp TTHHHHHHHHHHT----TSEEEEEEEEEHHHHHHHHHHTTSS
T ss_pred hhHHHHHHHHHHC----CCEEEEECCCcHHHHHHHHHHcCCC
Confidence 5566888888887 9999999999999999999998874
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.042 Score=57.67 Aligned_cols=48 Identities=21% Similarity=0.195 Sum_probs=43.4
Q ss_pred ecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEec
Q 001705 922 VPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILR 972 (1024)
Q Consensus 922 ~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMg 972 (1024)
...+-.|..+++.++++.++++++++++ ||+.+ | ++|++.+|.++++.
T Consensus 150 ~~~g~~K~~~l~~~~~~~~~~~~~~~~~-gDs~~-D-~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 150 NCKGEGKVHALAELLAEEQIDLKDSYAY-GDSIS-D-LPLLSLVGHPYVVN 197 (202)
T ss_pred CCCChHHHHHHHHHHHHcCCCHHHcEee-eCCcc-c-HHHHHhCCCcEEeC
Confidence 3456679999999999999999999997 99999 9 99999999999886
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=93.81 E-value=19 Score=43.07 Aligned_cols=92 Identities=14% Similarity=0.182 Sum_probs=56.3
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhh-ccCCcEEEeC----
Q 001705 548 VAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----VDIL-KALNNGLLVD---- 618 (1024)
Q Consensus 548 V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~----~eii-~~~~~Gllv~---- 618 (1024)
+.+.++.|+.++.. .. ..+.||.- +--.+.+||+.+|+|+|+-..-+= ...+ +....|+-+.
T Consensus 337 l~v~~W~PQ~~vL~---h~--~vg~fvtH----~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~ 407 (470)
T PLN03015 337 LVVTQWAPQVEILS---HR--SIGGFLSH----CGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPS 407 (470)
T ss_pred eEEEecCCHHHHhc---cC--ccCeEEec----CCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEeccccc
Confidence 45668888876544 33 12456532 223588999999999999764331 1222 3345676663
Q ss_pred --CCCHHHHHHHHHHHHhC-HHHHHHHHHHHHH
Q 001705 619 --PHDQNAIADALLKLLAD-KNMWSECRKNGLK 648 (1024)
Q Consensus 619 --p~d~~~la~aI~~ll~d-~~~~~~~~~~~~~ 648 (1024)
.-..++++++|++++.. .++-+++++++++
T Consensus 408 ~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~ 440 (470)
T PLN03015 408 EKVIGREEVASLVRKIVAEEDEEGQKIRAKAEE 440 (470)
T ss_pred CCccCHHHHHHHHHHHHccCcccHHHHHHHHHH
Confidence 13678999999999952 1334455555554
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.76 E-value=1.2 Score=55.03 Aligned_cols=51 Identities=16% Similarity=0.264 Sum_probs=42.7
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccc
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad 987 (1024)
.|-.-++.|.++- +++|.-||+-| | -.-|+.+.+||||| -|+.+-.|+++|
T Consensus 665 HK~kIVeaLq~~g-----eivAMTGDGVN-D-ApALK~AdIGIAMG---~~GTdVaKeAsD 715 (972)
T KOG0202|consen 665 HKLKIVEALQSRG-----EVVAMTGDGVN-D-APALKKADIGIAMG---ISGTDVAKEASD 715 (972)
T ss_pred hHHHHHHHHHhcC-----CEEEecCCCcc-c-hhhhhhcccceeec---CCccHhhHhhhh
Confidence 5888888886643 46777799999 9 99999999999999 477877788888
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=93.75 E-value=0.33 Score=64.19 Aligned_cols=40 Identities=8% Similarity=0.148 Sum_probs=36.3
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
.+.+.+.++++++++. |+++.+.||-....+..+..+.++
T Consensus 726 ~lr~~v~~~I~~l~~a----gi~v~mlTGD~~~tAi~IA~s~~L 765 (1178)
T PLN03190 726 KLQQGVPEAIESLRTA----GIKVWVLTGDKQETAISIGYSSKL 765 (1178)
T ss_pred CCchhHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHhCC
Confidence 4668888999999987 999999999999999999999887
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=93.69 E-value=1.7 Score=49.83 Aligned_cols=80 Identities=14% Similarity=0.078 Sum_probs=49.7
Q ss_pred CCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhc
Q 001705 489 KKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 568 (1024)
Q Consensus 489 ~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~ 568 (1024)
.+.++.+++++.++.+ +. +.+++...++. +.+.....+. ..+.+.+ +..++|+.|
T Consensus 182 ~~llP~~~~aa~~L~~--~~--~~~~i~~a~~~-----------~~i~~~~~~~---~~~~~~~-----~~~~~m~~a-- 236 (347)
T PRK14089 182 KRLMPIFKELAKKLEG--KE--KILVVPSFFKG-----------KDLKEIYGDI---SEFEISY-----DTHKALLEA-- 236 (347)
T ss_pred HHHHHHHHHHHHHHhh--cC--cEEEEeCCCcH-----------HHHHHHHhcC---CCcEEec-----cHHHHHHhh--
Confidence 3566777889888853 22 44444322221 2333333322 1333332 557899999
Q ss_pred CCcEEEecCCCCCCCHHHHHHHHcCCcEEEcC
Q 001705 569 TKGVFINPALVEPFGLTIIEAAAYGLPVVATK 600 (1024)
Q Consensus 569 ~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~ 600 (1024)
|+++..| |.+.+|++.+|+|.|..-
T Consensus 237 --Dlal~~S-----GT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 237 --EFAFICS-----GTATLEAALIGTPFVLAY 261 (347)
T ss_pred --hHHHhcC-----cHHHHHHHHhCCCEEEEE
Confidence 8988775 888889999999998854
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=93.57 E-value=0.18 Score=55.42 Aligned_cols=48 Identities=17% Similarity=0.196 Sum_probs=35.9
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHH---HHHHHHHhcCCCCCCCCEEEec
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLG---ETMEAIRRCTVNIEDFDAIVCN 820 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~---~~~~~l~~~~i~~~~~d~lI~~ 820 (1024)
+.+.++|+.+.++ |+.++++|+|+.. .+...|+.+|++...++.+++.
T Consensus 121 pGA~e~L~~L~~~----G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr 171 (266)
T TIGR01533 121 AGALDFLNYANSK----GVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLK 171 (266)
T ss_pred ccHHHHHHHHHHC----CCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeC
Confidence 5568899999887 9999999999843 4557888889863234556554
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=93.49 E-value=0.043 Score=56.18 Aligned_cols=42 Identities=24% Similarity=0.232 Sum_probs=37.5
Q ss_pred EecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCC
Q 001705 921 VVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGL 965 (1024)
Q Consensus 921 I~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~a 965 (1024)
..+.+.+|+.+++.+++..|++++++++| ||+.| | ++|++.+
T Consensus 136 ~~~~~~~K~~~l~~~~~~~~~~~~~~~~i-GDs~~-D-~~~~~~a 177 (177)
T TIGR01488 136 VNPEGECKGKVLKELLEESKITLKKIIAV-GDSVN-D-LPMLKLA 177 (177)
T ss_pred ccCCcchHHHHHHHHHHHhCCCHHHEEEE-eCCHH-H-HHHHhcC
Confidence 34678899999999999999999999997 99999 9 9999864
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=93.46 E-value=0.14 Score=63.48 Aligned_cols=148 Identities=16% Similarity=0.146 Sum_probs=103.6
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHhhccccCCCC-----cEEEEEecCCCcccccccchHHHHHHHHHHHHcC---
Q 001705 473 TNPHKPTILALSRPDPKKNVTT-LLKAFGECQPLRELA-----NMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYD--- 543 (1024)
Q Consensus 473 ~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~l~~~~-----~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~--- 543 (1024)
.+|+..+++++-|+...|.... ++....++..+...| ..++|.|+...... ......+..|...++..+
T Consensus 525 ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y--~~aK~iIklI~~va~~in~Dp 602 (798)
T PRK14985 525 INPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY--YLAKNIIFAINKVAEVINNDP 602 (798)
T ss_pred cCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCc--HHHHHHHHHHHHHHHHhcCCh
Confidence 4678888999999999998877 666655554444443 25565544322111 112345556666664442
Q ss_pred -CCC--CEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhcc--CCcEEE
Q 001705 544 -LYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAL--VEPFGLTIIEAAAYGLPVVATKNGGPVDILKA--LNNGLL 616 (1024)
Q Consensus 544 -l~~--~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~--~~~Gll 616 (1024)
+.+ +|.|+.-..-+--..++.+| ||-.+.|. .|..|..=+-+|.-|.+.|+|-.|+..|+.+. ++||++
T Consensus 603 ~v~~~lkVVFlenY~VslAe~lipaa----Dvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~ 678 (798)
T PRK14985 603 LVGDKLKVVFLPDYCVSAAELLIPAA----DISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFI 678 (798)
T ss_pred hhCCceeEEEeCCCChHHHHHHhhhh----hhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEE
Confidence 334 68888776555556666777 99998876 59999999999999999999999999999875 789999
Q ss_pred eCCCCHHHHHH
Q 001705 617 VDPHDQNAIAD 627 (1024)
Q Consensus 617 v~p~d~~~la~ 627 (1024)
+-. +.+++.+
T Consensus 679 fG~-~~~ev~~ 688 (798)
T PRK14985 679 FGH-TVEQVKA 688 (798)
T ss_pred eCC-CHHHHHH
Confidence 954 5555443
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=93.42 E-value=0.12 Score=51.59 Aligned_cols=54 Identities=17% Similarity=0.142 Sum_probs=40.5
Q ss_pred EEEecCCCCCCCch----------hhHHHHHHHHHHHhhccCCCCeEEEEECCCCH---------------HHHHHHHHh
Q 001705 752 IAADCYDSDGNTTE----------TFQATIKNVMKAAGLSLGLGRVGFILVTGSSL---------------GETMEAIRR 806 (1024)
Q Consensus 752 Ia~DlDGTl~~~~~----------~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~---------------~~~~~~l~~ 806 (1024)
+++|+||||.+... .+-+.+.++|+.|+++ |+.++|+|..+. ..+...++.
T Consensus 3 ~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~----g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 78 (147)
T TIGR01656 3 LFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAA----GYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQ 78 (147)
T ss_pred EEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHC----CCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHh
Confidence 45899999665432 2457788999999987 999999998652 456666777
Q ss_pred cCC
Q 001705 807 CTV 809 (1024)
Q Consensus 807 ~~i 809 (1024)
+++
T Consensus 79 ~~l 81 (147)
T TIGR01656 79 LGV 81 (147)
T ss_pred CCC
Confidence 665
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=93.32 E-value=0.066 Score=54.50 Aligned_cols=90 Identities=22% Similarity=0.271 Sum_probs=59.8
Q ss_pred CCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCC--------chhhhccCCcEEEe
Q 001705 546 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG--------PVDILKALNNGLLV 617 (1024)
Q Consensus 546 ~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg--------~~eii~~~~~Gllv 617 (1024)
.+|.+.++ .+++.++|+.| |++|.- +-+.|+.|++++|+|.|.-...+ ....+.....|+.+
T Consensus 55 ~~v~~~~~--~~~m~~~m~~a----DlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~ 124 (167)
T PF04101_consen 55 PNVKVFGF--VDNMAELMAAA----DLVISH----AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIML 124 (167)
T ss_dssp CCCEEECS--SSSHHHHHHHH----SEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCS
T ss_pred CcEEEEec--hhhHHHHHHHc----CEEEeC----CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCcccc
Confidence 57888888 45799999999 988854 33589999999999998766555 12223333345444
Q ss_pred CCC--CHHHHHHHHHHHHhCHHHHHHHHHH
Q 001705 618 DPH--DQNAIADALLKLLADKNMWSECRKN 645 (1024)
Q Consensus 618 ~p~--d~~~la~aI~~ll~d~~~~~~~~~~ 645 (1024)
... +++.|.++|..++.++....++..+
T Consensus 125 ~~~~~~~~~L~~~i~~l~~~~~~~~~~~~~ 154 (167)
T PF04101_consen 125 DESELNPEELAEAIEELLSDPEKLKEMAKA 154 (167)
T ss_dssp ECCC-SCCCHHHHHHCHCCCHH-SHHHCCC
T ss_pred CcccCCHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 322 3678999999999998875655444
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.26 E-value=0.55 Score=50.24 Aligned_cols=42 Identities=17% Similarity=0.138 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCC---ceEEec
Q 001705 928 RIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLH---KTLILR 972 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag---~gVaMg 972 (1024)
.-..+..+++.+|+++++++. |||+.+ | +.|=+.+| .+|..|
T Consensus 147 ~P~~l~~~~~~~~~~~~~~l~-VGDs~~-D-i~aA~~Ag~~~v~v~~g 191 (220)
T COG0546 147 DPEPLLLLLEKLGLDPEEALM-VGDSLN-D-ILAAKAAGVPAVGVTWG 191 (220)
T ss_pred CHHHHHHHHHHhCCChhheEE-ECCCHH-H-HHHHHHcCCCEEEEECC
Confidence 457888999999999778888 599999 9 99999998 344555
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=93.20 E-value=0.35 Score=52.23 Aligned_cols=37 Identities=5% Similarity=0.050 Sum_probs=29.4
Q ss_pred HHHHHHHHHhhccCCCCeEEEEECCCC----HHHHHHHHHhcCCC
Q 001705 770 TIKNVMKAAGLSLGLGRVGFILVTGSS----LGETMEAIRRCTVN 810 (1024)
Q Consensus 770 ~~~~~l~~l~~~~~~~gi~~viaTGR~----~~~~~~~l~~~~i~ 810 (1024)
..+++|+.++++ |+.++++|||+ ...+..+++.+|++
T Consensus 118 Ga~elL~~L~~~----G~~I~iVTnR~~~k~~~t~~~Llk~~gip 158 (237)
T PRK11009 118 VARQLIDMHVKR----GDSIYFITGRTATKTETVSKTLADDFHIP 158 (237)
T ss_pred HHHHHHHHHHHC----CCeEEEEeCCCCcccHHHHHHHHHHcCCC
Confidence 378899999887 99999999996 33566666678884
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.95 E-value=0.65 Score=55.64 Aligned_cols=41 Identities=20% Similarity=0.442 Sum_probs=32.6
Q ss_pred CCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceE-Eec
Q 001705 926 ASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTL-ILR 972 (1024)
Q Consensus 926 asKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gV-aMg 972 (1024)
.-|++-++-|.++-|- .+.| |||++| | .+|++.++.|| ++|
T Consensus 767 tQKA~v~~llq~~t~k---rvc~-IGDGGN-D-VsMIq~A~~GiGI~g 808 (1051)
T KOG0210|consen 767 TQKAQVVRLLQKKTGK---RVCA-IGDGGN-D-VSMIQAADVGIGIVG 808 (1051)
T ss_pred hHHHHHHHHHHHhhCc---eEEE-EcCCCc-c-chheeecccceeeec
Confidence 3699999999988874 3555 699999 9 99999887766 344
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=92.92 E-value=0.12 Score=58.13 Aligned_cols=55 Identities=9% Similarity=0.052 Sum_probs=45.6
Q ss_pred EEEEecCCCCCCC------------chhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 751 VIAADCYDSDGNT------------TETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 751 lIa~DlDGTl~~~------------~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
++.+|+|||+... +..+.+.+.++|+.|+++ |+.++++|||+.......++.+++
T Consensus 160 ~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----g~~i~i~T~r~~~~~~~~l~~l~~ 226 (300)
T PHA02530 160 AVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAA----GYEIIVVSGRDGVCEEDTVEWLRQ 226 (300)
T ss_pred EEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhC----CCEEEEEeCCChhhHHHHHHHHHH
Confidence 4448999996542 235678999999999987 999999999999999998888776
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=92.78 E-value=0.62 Score=53.78 Aligned_cols=42 Identities=10% Similarity=0.108 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEec
Q 001705 928 RIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILR 972 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMg 972 (1024)
+...+.+.++++|++++++++| ||+.. | +..=+.+|..++.-
T Consensus 274 ~Peifl~A~~~lgl~Peecl~I-GDS~~-D-IeAAk~AGm~~IgV 315 (381)
T PLN02575 274 DPEMFIYAAQLLNFIPERCIVF-GNSNQ-T-VEAAHDARMKCVAV 315 (381)
T ss_pred CHHHHHHHHHHcCCCcccEEEE-cCCHH-H-HHHHHHcCCEEEEE
Confidence 5678889999999999999997 99999 9 99999999755443
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=92.76 E-value=0.29 Score=51.48 Aligned_cols=40 Identities=8% Similarity=0.183 Sum_probs=36.2
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
.+-+.+.++|+.|++. |+.++++||-+...+..+.+.+||
T Consensus 127 ~~~~~~~~~l~~L~~~----Gi~~~i~TGD~~~~a~~~~~~lgi 166 (215)
T PF00702_consen 127 PLRPGAKEALQELKEA----GIKVAILTGDNESTASAIAKQLGI 166 (215)
T ss_dssp EBHTTHHHHHHHHHHT----TEEEEEEESSEHHHHHHHHHHTTS
T ss_pred cchhhhhhhhhhhhcc----Ccceeeeecccccccccccccccc
Confidence 4667889999999998 999999999999999999999776
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=92.75 E-value=0.22 Score=51.07 Aligned_cols=56 Identities=4% Similarity=0.008 Sum_probs=44.2
Q ss_pred EEEEEecCCCCCCCch-hhHHHHHHHHHHHhhccCCCCeEEEEECCCC-HHHHHHHHHhcCC
Q 001705 750 IVIAADCYDSDGNTTE-TFQATIKNVMKAAGLSLGLGRVGFILVTGSS-LGETMEAIRRCTV 809 (1024)
Q Consensus 750 llIa~DlDGTl~~~~~-~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~-~~~~~~~l~~~~i 809 (1024)
-++++|+|||+...+. .+.+.+.++|++|++. |+.++|+|+.+ ...+..+++.+++
T Consensus 26 ~~vv~D~Dgtl~~~~~~~~~pgv~e~L~~Lk~~----g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 26 KGVVLDKDNTLVYPDHNEAYPALRDWIEELKAA----GRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CEEEEecCCccccCCCCCcChhHHHHHHHHHHc----CCEEEEEeCCchHHHHHHHHHHcCC
Confidence 3555899999776544 6778899999999987 99999999998 5666666677555
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=92.64 E-value=0.88 Score=47.69 Aligned_cols=39 Identities=13% Similarity=0.025 Sum_probs=32.1
Q ss_pred HHHHHHHHHHhCCCCCCEEEEeCCCC-CCChHHhhcCCCceEE
Q 001705 929 IQALRYLSIRWGIDLSKMVVFVGEKG-DTDYEDLLVGLHKTLI 970 (1024)
Q Consensus 929 g~AL~~L~~~~gi~~~~vvafiGDs~-N~D~~~Ml~~ag~gVa 970 (1024)
....+++++++|+++++++.+ ||+. + | +..=+.+|...+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~I-gD~~~~-D-i~~A~~aG~~~i 202 (203)
T TIGR02252 163 PKIFQEALERAGISPEEALHI-GDSLRN-D-YQGARAAGWRAL 202 (203)
T ss_pred HHHHHHHHHHcCCChhHEEEE-CCCchH-H-HHHHHHcCCeee
Confidence 456899999999999999996 9997 8 9 877777776543
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=92.64 E-value=0.24 Score=50.88 Aligned_cols=39 Identities=5% Similarity=0.026 Sum_probs=34.2
Q ss_pred hHHHHHHHHHHHhhccCCCCeEEEEECCC-CHHHHHHHHHhcCC
Q 001705 767 FQATIKNVMKAAGLSLGLGRVGFILVTGS-SLGETMEAIRRCTV 809 (1024)
Q Consensus 767 i~~~~~~~l~~l~~~~~~~gi~~viaTGR-~~~~~~~~l~~~~i 809 (1024)
+-+.+.++|+.|+++ |+.++|+|+. +...+..+++.+++
T Consensus 46 l~pGv~elL~~Lk~~----G~~l~I~Sn~~~~~~~~~~L~~~~l 85 (174)
T TIGR01685 46 LIKEVRDVLQTLKDA----GTYLATASWNDVPEWAYEILGTFEI 85 (174)
T ss_pred EcccHHHHHHHHHHC----CCEEEEEeCCCChHHHHHHHHhCCc
Confidence 347789999999987 9999999998 88888999998886
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=92.55 E-value=29 Score=41.51 Aligned_cols=146 Identities=16% Similarity=0.185 Sum_probs=77.1
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHhhccccCCCCcEEEEEecCCCccccc-ccchHHHHHHHHHHHHcCCCCCEEeCC
Q 001705 476 HKPTILALSRPD--PKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMS-NSSSVVLTTVLKLIDKYDLYGQVAYPK 552 (1024)
Q Consensus 476 ~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~-~~~~~~~~~i~~~i~~~~l~~~V~~~g 552 (1024)
+..+.+++|.+. +.+-+..+..+++.+. . .+.-++......+... ..............++ ..++..+.+
T Consensus 261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s~----~-~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~--~~~~g~v~~ 333 (455)
T PLN02152 261 SSVIYVSFGTMVELSKKQIEELARALIEGK----R-PFLWVITDKLNREAKIEGEEETEIEKIAGFRHE--LEEVGMIVS 333 (455)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHcC----C-CeEEEEecCcccccccccccccccccchhHHHh--ccCCeEEEe
Confidence 456777888754 3456777778887773 1 3322454311100000 0000000001122222 234556668
Q ss_pred CCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhhcc-CCcEEEeC-----CCCH
Q 001705 553 HHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----VDILKA-LNNGLLVD-----PHDQ 622 (1024)
Q Consensus 553 ~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~----~eii~~-~~~Gllv~-----p~d~ 622 (1024)
+.|+.+ ++...+ .++||.- +-..+++||+.+|+|+|+-...+= ...+.+ .+.|+-+. .-+.
T Consensus 334 W~PQ~~---iL~h~~--vg~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~ 404 (455)
T PLN02152 334 WCSQIE---VLRHRA--VGCFVTH----CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVER 404 (455)
T ss_pred eCCHHH---HhCCcc--cceEEee----CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCcH
Confidence 888764 555551 1345522 334688999999999999764332 222222 13455542 1267
Q ss_pred HHHHHHHHHHHhCHH
Q 001705 623 NAIADALLKLLADKN 637 (1024)
Q Consensus 623 ~~la~aI~~ll~d~~ 637 (1024)
+++++++.+++.++.
T Consensus 405 e~l~~av~~vm~~~~ 419 (455)
T PLN02152 405 GEIRRCLEAVMEEKS 419 (455)
T ss_pred HHHHHHHHHHHhhhH
Confidence 899999999997543
|
|
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=92.42 E-value=0.77 Score=56.59 Aligned_cols=146 Identities=14% Similarity=0.170 Sum_probs=86.4
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HH---HHHhhccccC--CCCcEEEEEecCCC-cccccccchHHHHHHHHHHHHc---
Q 001705 473 TNPHKPTILALSRPDPKKNVTT-LL---KAFGECQPLR--ELANMTLILGNRDD-IEDMSNSSSVVLTTVLKLIDKY--- 542 (1024)
Q Consensus 473 ~~~~~~~Il~vgRld~~Kgi~~-ll---~A~~~l~~l~--~~~~l~LIvG~~~~-~~~l~~~~~~~~~~i~~~i~~~--- 542 (1024)
.+|+..+++++-|+...|.... ++ .-+.++.... .....++|+|+-.. -+.+ ..+++..|..+++..
T Consensus 440 ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~~---gK~iIk~I~~va~~in~D 516 (713)
T PF00343_consen 440 LDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDYM---GKEIIKLINNVAEVINND 516 (713)
T ss_dssp --TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-HH---HHHHHHHHHHHHHHHCT-
T ss_pred CCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcHH---HHHHHHHHHHHHHHHhcC
Confidence 3678888999999999998777 33 3344443211 11235565544322 1221 234555555555432
Q ss_pred -CCCC--CEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhcc--CCcEE
Q 001705 543 -DLYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAL--VEPFGLTIIEAAAYGLPVVATKNGGPVDILKA--LNNGL 615 (1024)
Q Consensus 543 -~l~~--~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~--~~~Gl 615 (1024)
.+.+ +|.|+.-.+-+--..++..| ||-++.|. .|..|..-+-+|.-|.+.++|..|+..|+.+. .+|.+
T Consensus 517 p~v~~~lkVvFlenYdvslA~~lipg~----DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~f 592 (713)
T PF00343_consen 517 PEVGDRLKVVFLENYDVSLAEKLIPGV----DVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIF 592 (713)
T ss_dssp TTTCCGEEEEEETT-SHHHHHHHGGG-----SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSE
T ss_pred hhhccceeEEeecCCcHHHHHHHhhhh----hhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEE
Confidence 3344 68887776544444555555 99999987 59999999999999999999999999999864 45788
Q ss_pred EeCCCCHHHHH
Q 001705 616 LVDPHDQNAIA 626 (1024)
Q Consensus 616 lv~p~d~~~la 626 (1024)
++- .+.+++.
T Consensus 593 iFG-~~~~ev~ 602 (713)
T PF00343_consen 593 IFG-LTAEEVE 602 (713)
T ss_dssp EES--BHHHHH
T ss_pred EcC-CCHHHHH
Confidence 884 3555543
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=92.24 E-value=0.2 Score=60.51 Aligned_cols=84 Identities=18% Similarity=0.203 Sum_probs=53.6
Q ss_pred CCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhhccCCcEEEeCCC-
Q 001705 546 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG----PVDILKALNNGLLVDPH- 620 (1024)
Q Consensus 546 ~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg----~~eii~~~~~Gllv~p~- 620 (1024)
.++....++||. ++++.. ..++||. -|--.++.||+.+|+|+|+-..-| ....+.+.+.|+.++..
T Consensus 323 ~n~~~~~W~PQ~---~lL~hp--~v~~fit----HgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~ 393 (500)
T PF00201_consen 323 KNVLIVKWLPQN---DLLAHP--RVKLFIT----HGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKND 393 (500)
T ss_dssp TTEEEESS--HH---HHHTST--TEEEEEE----S--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC
T ss_pred ceEEEeccccch---hhhhcc--cceeeee----ccccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecC
Confidence 477888999886 445544 1245552 233478999999999999976422 23344455678888754
Q ss_pred -CHHHHHHHHHHHHhCHHH
Q 001705 621 -DQNAIADALLKLLADKNM 638 (1024)
Q Consensus 621 -d~~~la~aI~~ll~d~~~ 638 (1024)
+.+++.++|.++++|+.-
T Consensus 394 ~~~~~l~~ai~~vl~~~~y 412 (500)
T PF00201_consen 394 LTEEELRAAIREVLENPSY 412 (500)
T ss_dssp -SHHHHHHHHHHHHHSHHH
T ss_pred CcHHHHHHHHHHHHhhhHH
Confidence 578899999999999753
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E | Back alignment and domain information |
|---|
Probab=91.69 E-value=23 Score=38.64 Aligned_cols=139 Identities=15% Similarity=0.149 Sum_probs=76.0
Q ss_pred EEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHH-----------HHHcCCC--CC
Q 001705 481 LALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKL-----------IDKYDLY--GQ 547 (1024)
Q Consensus 481 l~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~-----------i~~~~l~--~~ 547 (1024)
+|+||..-.||+..++..-+++ +.+ +++.-++-+-+.. .. .-.|... +++..+. +-
T Consensus 187 ~yigR~Tt~kG~~~mfD~h~~~--lK~-~~~~t~~~GierS-------~A-~~~i~d~~~~~~y~~~~~~~~~~~~pN~~ 255 (355)
T PF11440_consen 187 RYIGRQTTWKGPRRMFDLHEKI--LKP-AGFKTIMEGIERS-------PA-KISIKDHGIPYEYYPKLDCDEPKPAPNSP 255 (355)
T ss_dssp EEE--SSGGG-HHHHHHHHHHT--TTT-TT-EEEEE---SS-------TH-HHHHHHTT--EEEE-CTGGGG---SSS--
T ss_pred eeeeeeeeecCcHHHhhhHHHh--cCC-cchhHHhhhhhcC-------Cc-eeeeecCCcccccCccccccCcccCCCCc
Confidence 7999999999999999998887 333 7777666443211 11 1112211 1122222 23
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEe-cC------CCCCCCHHHHHHHHcCC-cEEEcCCCCchh-------hhccCC
Q 001705 548 VAYPKHHKQSDVPDIYRLAAKTKGVFIN-PA------LVEPFGLTIIEAAAYGL-PVVATKNGGPVD-------ILKALN 612 (1024)
Q Consensus 548 V~~~g~~~~~el~~ly~~A~~~~dv~v~-ps------~~Egfgl~llEAmA~G~-PVVat~~Gg~~e-------ii~~~~ 612 (1024)
+..+|..=.+|..+.++.. .|.. -+ +.+.|-.+-+|..|||+ ||.-...|-... ++.+..
T Consensus 256 ~~v~~~Yi~~E~~~~Maks-----~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~ 330 (355)
T PF11440_consen 256 VPVYGPYIRSEGLERMAKS-----LFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPY 330 (355)
T ss_dssp EEEESS--HHHHHHHHHTE-----EEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--
T ss_pred ceecchhhhHHHHHHHhhc-----cceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCc
Confidence 5566766677778888777 4432 22 23568899999999996 666665554322 344445
Q ss_pred cEEEeCCCCHHHHHHHHHHHHhC
Q 001705 613 NGLLVDPHDQNAIADALLKLLAD 635 (1024)
Q Consensus 613 ~Gllv~p~d~~~la~aI~~ll~d 635 (1024)
..+.+|-.|-++-.+.|.++-++
T Consensus 331 ~~I~~De~dle~T~ekl~E~a~~ 353 (355)
T PF11440_consen 331 SAIYFDENDLESTVEKLIEVANN 353 (355)
T ss_dssp S-EEE-TTSHHHHHHHHHHHHT-
T ss_pred ceeEeccchHHHHHHHHHHHhcc
Confidence 67889988999888888887655
|
coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=91.34 E-value=0.38 Score=49.54 Aligned_cols=35 Identities=20% Similarity=0.168 Sum_probs=28.9
Q ss_pred HHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceE
Q 001705 932 LRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTL 969 (1024)
Q Consensus 932 L~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gV 969 (1024)
+...++++|+++++++++ ||+.. | ++.=+.+|..+
T Consensus 112 ~~~a~~~~~~~~~~~v~V-GDs~~-D-i~aA~~aG~~~ 146 (176)
T TIGR00213 112 LLQARKELHIDMAQSYMV-GDKLE-D-MQAGVAAKVKT 146 (176)
T ss_pred HHHHHHHcCcChhhEEEE-cCCHH-H-HHHHHHCCCcE
Confidence 356677789999999986 99999 9 88888899864
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway | Back alignment and domain information |
|---|
Probab=91.15 E-value=0.89 Score=51.34 Aligned_cols=212 Identities=14% Similarity=0.166 Sum_probs=107.2
Q ss_pred eeEEEEEecCCCCCCCchhh---HHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHH----------Hhc-CCCCCC
Q 001705 748 MLIVIAADCYDSDGNTTETF---QATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAI----------RRC-TVNIED 813 (1024)
Q Consensus 748 rlllIa~DlDGTl~~~~~~i---~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l----------~~~-~i~~~~ 813 (1024)
++-++-||.|+||..+.+.+ ++-+..+++-|+ + |+.|+|+|.=.|....++- +.. .++...
T Consensus 146 ~L~LvTFDgDvTLY~DG~sl~~d~pvi~~ii~LL~-~----gv~VgIVTAAGY~~a~kY~~RL~GLL~a~~~~~~Lt~~q 220 (408)
T PF06437_consen 146 GLKLVTFDGDVTLYEDGASLEPDNPVIPRIIKLLR-R----GVKVGIVTAAGYPGAEKYEERLHGLLDAFKDSTDLTPEQ 220 (408)
T ss_pred CceEEEEcCCcccccCCCCCCCCchHHHHHHHHHh-c----CCeEEEEeCCCCCChHHHHHHHHHHHHHHHhccCCCHHH
Confidence 78888999999988764443 234445555444 3 8999999987776655443 322 332111
Q ss_pred CCEEEecCCceEE----cCC---C-ccccCcchhhhhcccCCchhHHHHHhhhhhccCCCC-cccccccCCCCceEEEEE
Q 001705 814 FDAIVCNSGSELY----FPW---R-DMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAE-DDIVGFVDASSSRCQSYS 884 (1024)
Q Consensus 814 ~d~lI~~nGa~I~----~~~---~-~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~-~~~~~~~~~~~~~k~~~~ 884 (1024)
-.-++-..|--=| +++ + .++++..|....-..|..+.+..++..-........ .+......-.+...+-..
T Consensus 221 k~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~~m~~W~~~dI~~lLD~AE~~L~~~~~~l~Lpa~IiRK~RAVGiv 300 (408)
T PF06437_consen 221 KSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLLPEMKTWSEEDITELLDIAEAALRDCVKRLNLPATIIRKERAVGIV 300 (408)
T ss_pred hcCEEEecccceeEEEecCCCCCCeEEccHHhccCccccCcCHHHHHHHHHHHHHHHHHHHHHcCCCeeEEeecceeeEe
Confidence 1123332332211 121 0 234556676555567887777766643221100000 000000000000111111
Q ss_pred ecCCC--chhhHHHH----HHHHHhcCCeEEEEEe----cCCeEEEEecCCCCHHHHHHHHHHHh----CCCCCCEEEEe
Q 001705 885 IKPGA--ETRKVDNI----RQRLRMRGFRCNLVYT----RAGSRLNVVPSFASRIQALRYLSIRW----GIDLSKMVVFV 950 (1024)
Q Consensus 885 ~~~~~--~~~~~~el----~~~L~~~~~~~~v~~s----~~~~~lEI~p~gasKg~AL~~L~~~~----gi~~~~vvafi 950 (1024)
-.... ....++|+ ++.|........+-+| ++.-|+|| -+|.-|++.|..++ +|.+++++-+
T Consensus 301 P~~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDI----GdKs~GV~~lQ~y~~~~~~i~~~~tLHV- 375 (408)
T PF06437_consen 301 PKPGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDI----GDKSLGVRALQKYFDPEGGIKPSETLHV- 375 (408)
T ss_pred cCCCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEc----CCcHHhHHHHHHHHHhccCCCccceeee-
Confidence 01111 11223333 4455443222222222 22246777 58999999999999 9999999995
Q ss_pred CCC----C-CCChHHhhcCCCceEEec
Q 001705 951 GEK----G-DTDYEDLLVGLHKTLILR 972 (1024)
Q Consensus 951 GDs----~-N~D~~~Ml~~ag~gVaMg 972 (1024)
||. + | |+-. +.++.++-++
T Consensus 376 GDQF~s~GaN-Dfka--R~a~~t~WIa 399 (408)
T PF06437_consen 376 GDQFLSAGAN-DFKA--RLACTTAWIA 399 (408)
T ss_pred hhhhhccCCc-chhh--hhhceeeEec
Confidence 993 4 8 8211 2356666666
|
; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=91.11 E-value=0.46 Score=55.37 Aligned_cols=42 Identities=7% Similarity=-0.065 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceE-Eec
Q 001705 928 RIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTL-ILR 972 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gV-aMg 972 (1024)
+...+...++++|+++++++++ ||+.+ | ++.=+.+|..+ ++.
T Consensus 152 ~p~~~~~a~~~lgv~p~~~l~V-GDs~~-D-i~aA~~aGi~~I~v~ 194 (382)
T PLN02940 152 SPDIFLEAAKRLNVEPSNCLVI-EDSLP-G-VMAGKAAGMEVIAVP 194 (382)
T ss_pred CHHHHHHHHHHcCCChhHEEEE-eCCHH-H-HHHHHHcCCEEEEEC
Confidence 5678999999999999999996 99999 9 88888899654 444
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=91.07 E-value=0.63 Score=50.79 Aligned_cols=42 Identities=17% Similarity=-0.008 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhCCC-CCCEEEEeCCCCCCChHHhhcCCCc-eEEec
Q 001705 928 RIQALRYLSIRWGID-LSKMVVFVGEKGDTDYEDLLVGLHK-TLILR 972 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~-~~~vvafiGDs~N~D~~~Ml~~ag~-gVaMg 972 (1024)
+-..+...++++|+. +++++++ ||+.+ | +.+=+.+|. .|++.
T Consensus 158 ~p~~~~~a~~~l~~~~~~~~l~I-GDs~~-D-i~aA~~aGi~~i~v~ 201 (253)
T TIGR01422 158 APWMALKNAIELGVYDVAACVKV-GDTVP-D-IEEGRNAGMWTVGLI 201 (253)
T ss_pred CHHHHHHHHHHcCCCCchheEEE-CCcHH-H-HHHHHHCCCeEEEEe
Confidence 456788889999995 8999996 99999 9 888888885 44444
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.88 E-value=0.3 Score=52.97 Aligned_cols=42 Identities=5% Similarity=-0.003 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCCC-CCChHHhhcCCCceEEec
Q 001705 928 RIQALRYLSIRWGIDLSKMVVFVGEKG-DTDYEDLLVGLHKTLILR 972 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~~~~vvafiGDs~-N~D~~~Ml~~ag~gVaMg 972 (1024)
+.....+.++++|+++++++.+ ||+. . | +..=+.+|...+.-
T Consensus 165 ~p~~~~~a~~~~~~~~~~~~~V-GD~~~~-D-i~~A~~aG~~~i~v 207 (238)
T PRK10748 165 FSDMYHLAAEKLNVPIGEILHV-GDDLTT-D-VAGAIRCGMQACWI 207 (238)
T ss_pred cHHHHHHHHHHcCCChhHEEEE-cCCcHH-H-HHHHHHCCCeEEEE
Confidence 4667888889999999999996 9995 7 8 77777888766655
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=90.86 E-value=0.41 Score=57.66 Aligned_cols=64 Identities=11% Similarity=0.085 Sum_probs=47.6
Q ss_pred EEEEecCCCCCCCch-----------h-hHHHHHHHHHHHhhccCCCCeEEEEECCCCH------------HHHHHHHHh
Q 001705 751 VIAADCYDSDGNTTE-----------T-FQATIKNVMKAAGLSLGLGRVGFILVTGSSL------------GETMEAIRR 806 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~-----------~-i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~------------~~~~~~l~~ 806 (1024)
+++||+||||..... . +-+.+.++|++|.++ |+.++|+|.-+- ..+..+++.
T Consensus 170 ia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~----Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~ 245 (526)
T TIGR01663 170 IAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEAD----GFKICIFTNQGGIARGKINADDFKAKIEAIVAK 245 (526)
T ss_pred EEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHC----CCEEEEEECCcccccCcccHHHHHHHHHHHHHH
Confidence 444999999664311 1 346788999999988 999999997554 347788999
Q ss_pred cCCCCCCCCEEEecC
Q 001705 807 CTVNIEDFDAIVCNS 821 (1024)
Q Consensus 807 ~~i~~~~~d~lI~~n 821 (1024)
+|++ ++.++|..
T Consensus 246 lgip---fdviia~~ 257 (526)
T TIGR01663 246 LGVP---FQVFIAIG 257 (526)
T ss_pred cCCc---eEEEEeCC
Confidence 9985 77777754
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=90.50 E-value=0.5 Score=48.01 Aligned_cols=55 Identities=11% Similarity=0.092 Sum_probs=40.3
Q ss_pred EEEecCCCCCCCch-----------hhHHHHHHHHHHHhhccCCCCeEEEEECCC---------------CHHHHHHHHH
Q 001705 752 IAADCYDSDGNTTE-----------TFQATIKNVMKAAGLSLGLGRVGFILVTGS---------------SLGETMEAIR 805 (1024)
Q Consensus 752 Ia~DlDGTl~~~~~-----------~i~~~~~~~l~~l~~~~~~~gi~~viaTGR---------------~~~~~~~~l~ 805 (1024)
+++|.||||..... .+-+.+.++|++|+++ |+.++|+|-- ....+..+++
T Consensus 4 ~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~----g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~ 79 (161)
T TIGR01261 4 LFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKA----GYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFR 79 (161)
T ss_pred EEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHC----CCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHH
Confidence 34899999665211 2336688999999987 9999999974 3456777888
Q ss_pred hcCCC
Q 001705 806 RCTVN 810 (1024)
Q Consensus 806 ~~~i~ 810 (1024)
.+|+.
T Consensus 80 ~~gl~ 84 (161)
T TIGR01261 80 SQGII 84 (161)
T ss_pred HCCCc
Confidence 88873
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=90.26 E-value=0.66 Score=47.92 Aligned_cols=37 Identities=22% Similarity=0.188 Sum_probs=28.7
Q ss_pred HHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEE
Q 001705 931 ALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLI 970 (1024)
Q Consensus 931 AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVa 970 (1024)
.+.++++++|+++++++++ ||+.+ | +.+-+.+|..++
T Consensus 108 ~~~~~~~~l~~~~~~~~~V-gDs~~-D-i~~A~~aG~~~i 144 (181)
T PRK08942 108 MLLSIAERLNIDLAGSPMV-GDSLR-D-LQAAAAAGVTPV 144 (181)
T ss_pred HHHHHHHHcCCChhhEEEE-eCCHH-H-HHHHHHCCCeEE
Confidence 3444566778999999996 99999 9 888888887543
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=89.93 E-value=1.3 Score=47.15 Aligned_cols=39 Identities=10% Similarity=0.066 Sum_probs=33.8
Q ss_pred hHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 767 FQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 767 i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
+.+.+.++|++|+++ |+.++|+|+.....+...++.+++
T Consensus 88 l~~G~~~~L~~L~~~----g~~~~ivT~~~~~~~~~~l~~~~l 126 (220)
T TIGR03351 88 ALPGAEEAFRSLRSS----GIKVALTTGFDRDTAERLLEKLGW 126 (220)
T ss_pred cCCCHHHHHHHHHHC----CCEEEEEeCCchHHHHHHHHHhhh
Confidence 336677999999987 999999999999999999988776
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=89.84 E-value=0.38 Score=46.99 Aligned_cols=116 Identities=22% Similarity=0.159 Sum_probs=60.1
Q ss_pred CChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCCeEEEEecCC-CCCCcc-ccccC
Q 001705 194 TGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCG-ARDKYI-AKESL 271 (1024)
Q Consensus 194 ~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~-~~~~~~-~k~~l 271 (1024)
++|...-.+-|+++|.++| |+|.+.|.... .+.++ ..|+..+.++.. +..... ....+
T Consensus 8 t~Ghv~P~lala~~L~~rG--h~V~~~~~~~~--------~~~v~----------~~Gl~~~~~~~~~~~~~~~~~~~~~ 67 (139)
T PF03033_consen 8 TRGHVYPFLALARALRRRG--HEVRLATPPDF--------RERVE----------AAGLEFVPIPGDSRLPRSLEPLANL 67 (139)
T ss_dssp SHHHHHHHHHHHHHHHHTT---EEEEEETGGG--------HHHHH----------HTT-EEEESSSCGGGGHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHhccC--CeEEEeecccc--------eeccc----------ccCceEEEecCCcCcCcccchhhhh
Confidence 7899999999999999999 99999987531 11111 238888888754 110000 00001
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHhhh-----cCCCCCcceEEEEcCCChHHHHHHHHccCCCCEEEEeCC
Q 001705 272 WPYIHEFVDGALNHIVNMARAIGEQV-----NGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHS 336 (1024)
Q Consensus 272 wp~~~~f~~~~l~~~~~~~~~l~~~~-----~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~ 336 (1024)
+. +... ......+.+.+.+.. ..+....+|++..+. ....+..++.++++|.+.+...
T Consensus 68 ~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~vaE~~~iP~~~~~~~ 130 (139)
T PF03033_consen 68 RR----LARL-IRGLEEAMRILARFRPDLVVAAGGYVADDVIIAAP--LAFAAALVAEQLGIPGVANRLF 130 (139)
T ss_dssp HC----HHHH-HHHHHHHHHHHHHHHHCCCCHCTTTTECCEECHHH--HHTHHHHHHHHHTS-EEEEESS
T ss_pred hh----HHHH-hhhhhHHHHHhhccCcchhhhccCcccchHHHhhh--hcCccceeEhhhCchHHHHhhC
Confidence 11 1110 011111222222211 111112455554332 4556778888999999988763
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B .... |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=89.68 E-value=0.69 Score=46.19 Aligned_cols=37 Identities=8% Similarity=0.047 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 768 QATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 768 ~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
-+.+.+.|++|+ + ++.++|+|+-+...+..+++.+++
T Consensus 47 ~pG~~e~L~~L~-~----~~~l~I~Ts~~~~~~~~il~~l~~ 83 (148)
T smart00577 47 RPGVDEFLKRAS-E----LFELVVFTAGLRMYADPVLDLLDP 83 (148)
T ss_pred CCCHHHHHHHHH-h----ccEEEEEeCCcHHHHHHHHHHhCc
Confidence 356788999997 4 789999999999999999998766
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.54 E-value=2.3 Score=52.56 Aligned_cols=39 Identities=13% Similarity=0.337 Sum_probs=36.1
Q ss_pred hHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 767 FQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 767 i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
..|.++++++.++.. ||.|--+||-+...++.+..++||
T Consensus 648 vRPgV~~AV~~Cq~A----GItVRMVTGDNI~TAkAIA~eCGI 686 (1034)
T KOG0204|consen 648 VRPGVPEAVQLCQRA----GITVRMVTGDNINTAKAIARECGI 686 (1034)
T ss_pred CCCCcHHHHHHHHHc----CcEEEEEeCCcHHHHHHHHHHccc
Confidence 457888999999987 999999999999999999999998
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=89.44 E-value=0.9 Score=51.62 Aligned_cols=64 Identities=17% Similarity=0.191 Sum_probs=48.4
Q ss_pred EEEEecCCCCCCC----c--h-----hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHh----cCCCCCCCC
Q 001705 751 VIAADCYDSDGNT----T--E-----TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRR----CTVNIEDFD 815 (1024)
Q Consensus 751 lIa~DlDGTl~~~----~--~-----~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~----~~i~~~~~d 815 (1024)
+|++|+|+||-.- + . ..-+.+.++|++|+++ |+.++|||..+...+...|+. +++. ..|+
T Consensus 5 ~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~----Gi~lai~S~n~~~~a~~~l~~~~~~~~~~-~~f~ 79 (320)
T TIGR01686 5 VLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQ----GFLLALASKNDEDDAKKVFERRKDFILQA-EDFD 79 (320)
T ss_pred EEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhC----CCEEEEEcCCCHHHHHHHHHhCccccCcH-HHee
Confidence 5559999995431 1 0 2347899999999987 999999999999999999998 6663 2355
Q ss_pred EEEe
Q 001705 816 AIVC 819 (1024)
Q Consensus 816 ~lI~ 819 (1024)
.+++
T Consensus 80 ~~~~ 83 (320)
T TIGR01686 80 ARSI 83 (320)
T ss_pred EEEE
Confidence 5444
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=89.11 E-value=1.2 Score=48.54 Aligned_cols=64 Identities=13% Similarity=0.190 Sum_probs=46.8
Q ss_pred EEEEecCCCCCCCch--hh-HHHHHHHHHHHhhccCCCCe-EEEEECCCCHHHHHHHHHhcCCCCCCCCEEEec
Q 001705 751 VIAADCYDSDGNTTE--TF-QATIKNVMKAAGLSLGLGRV-GFILVTGSSLGETMEAIRRCTVNIEDFDAIVCN 820 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~--~i-~~~~~~~l~~l~~~~~~~gi-~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~ 820 (1024)
+|++|+|.||.+++. +| .+.+.+.+.+|++. |. .+.-++|- ..-+..-++++++. .-||.+||.
T Consensus 124 VIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~~----g~vLvLWSyG~-~eHV~~sl~~~~L~-~~Fd~ii~~ 191 (297)
T PF05152_consen 124 VIVFDLDSTLITDEGDVRIRDPAVYDSLRELKEQ----GCVLVLWSYGN-REHVRHSLKELKLE-GYFDIIICG 191 (297)
T ss_pred EEEEECCCcccccCCccccCChHHHHHHHHHHHc----CCEEEEecCCC-HHHHHHHHHHhCCc-cccEEEEeC
Confidence 566999999776533 33 47888999999998 74 55555554 56677788888886 468888884
|
|
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.08 E-value=2.8 Score=46.11 Aligned_cols=51 Identities=29% Similarity=0.402 Sum_probs=35.4
Q ss_pred HHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhc-CCCc-eEEecCCCCCChHHHhcc
Q 001705 931 ALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLV-GLHK-TLILRGSVMYGSEKLLHG 985 (1024)
Q Consensus 931 AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~-~ag~-gVaMgna~~NA~~elk~~ 985 (1024)
...+|.++++|+++.++++ ||..||| + ||. .+|. ++.|--.+ +-.++++..
T Consensus 229 m~~~l~~~~~i~psRt~mv-GDRL~TD-I-lFG~~~G~~TLLvltGv-~~led~~~~ 281 (306)
T KOG2882|consen 229 MFEYLLEKFNIDPSRTCMV-GDRLDTD-I-LFGKNCGFKTLLVLSGV-TTLEDILEA 281 (306)
T ss_pred HHHHHHHHcCCCcceEEEE-cccchhh-h-hHhhccCcceEEEecCc-CcHHHHHhc
Confidence 4678899999999999996 9999999 4 443 4554 56666344 344444443
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.01 E-value=0.84 Score=46.76 Aligned_cols=41 Identities=10% Similarity=0.101 Sum_probs=36.6
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCC
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVN 810 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~ 810 (1024)
++++.++++.+.|+++ |+.++++||=-...+.++..++||+
T Consensus 88 ~lT~Gi~eLv~~L~~~----~~~v~liSGGF~~~i~~Va~~Lgi~ 128 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHAR----GTQVYLISGGFRQLIEPVAEQLGIP 128 (227)
T ss_pred ccCCCHHHHHHHHHHc----CCeEEEEcCChHHHHHHHHHHhCCc
Confidence 3557888999999998 9999999999999999999999985
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=88.63 E-value=1.5 Score=53.08 Aligned_cols=39 Identities=10% Similarity=0.181 Sum_probs=33.6
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcC
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCT 808 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~ 808 (1024)
.+.+...++++++++. |+.+++.||.+...+..+.+++|
T Consensus 347 ~lr~~~~~~i~~l~~~----gi~~~~ltGD~~~~a~~ia~~lg 385 (499)
T TIGR01494 347 PLRDDAKETISELREA----GIRVIMLTGDNVLTAKAIAKELG 385 (499)
T ss_pred CCchhHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcC
Confidence 4567788999999887 99999999999999998888854
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.45 E-value=0.86 Score=48.52 Aligned_cols=43 Identities=14% Similarity=0.170 Sum_probs=38.2
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCc-eEEec
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHK-TLILR 972 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~-gVaMg 972 (1024)
.+..+++.++++++++++++++| ||+.+ | ++|.+.+|. +|.+.
T Consensus 150 p~~~~~~~~~~~~~~~~~~~i~i-gD~~~-D-i~~a~~~g~~~i~v~ 193 (226)
T PRK13222 150 PDPAPLLLACEKLGLDPEEMLFV-GDSRN-D-IQAARAAGCPSVGVT 193 (226)
T ss_pred cChHHHHHHHHHcCCChhheEEE-CCCHH-H-HHHHHHCCCcEEEEC
Confidence 35789999999999999999996 99999 9 999999998 66665
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=88.23 E-value=1.2 Score=48.77 Aligned_cols=39 Identities=8% Similarity=0.025 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhhccCCCCeEEEEECCCCHH---HHHHHHHhcCCC
Q 001705 768 QATIKNVMKAAGLSLGLGRVGFILVTGSSLG---ETMEAIRRCTVN 810 (1024)
Q Consensus 768 ~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~---~~~~~l~~~~i~ 810 (1024)
.+.+.+..+.+.+. |+.+++.|||+-. .....|...|++
T Consensus 147 lp~al~ly~~l~~~----G~kIf~VSgR~e~~r~aT~~NL~kaGy~ 188 (275)
T TIGR01680 147 LPETLKNYNKLVSL----GFKIIFLSGRLKDKQAVTEANLKKAGYH 188 (275)
T ss_pred ChHHHHHHHHHHHC----CCEEEEEeCCchhHHHHHHHHHHHcCCC
Confidence 45778888899887 9999999999843 356677777874
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.34 E-value=1.5 Score=44.10 Aligned_cols=55 Identities=7% Similarity=0.066 Sum_probs=47.8
Q ss_pred EEEecCCCCCC-CchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCC
Q 001705 752 IAADCYDSDGN-TTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVN 810 (1024)
Q Consensus 752 Ia~DlDGTl~~-~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~ 810 (1024)
|.+|+|.||.. ++...+++.++.+..+++. |++++|.|-.+..-+..+...++++
T Consensus 31 vi~DlDNTLv~wd~~~~tpe~~~W~~e~k~~----gi~v~vvSNn~e~RV~~~~~~l~v~ 86 (175)
T COG2179 31 VILDLDNTLVPWDNPDATPELRAWLAELKEA----GIKVVVVSNNKESRVARAAEKLGVP 86 (175)
T ss_pred EEEeccCceecccCCCCCHHHHHHHHHHHhc----CCEEEEEeCCCHHHHHhhhhhcCCc
Confidence 33899999554 3456889999999999997 9999999999999999999998885
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=87.30 E-value=0.73 Score=48.93 Aligned_cols=51 Identities=14% Similarity=0.075 Sum_probs=38.3
Q ss_pred cCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhc
Q 001705 923 PSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLH 984 (1024)
Q Consensus 923 p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~ 984 (1024)
..|..|-..|+.++ +.+.+...++ |||.| | ++||+.+++++++. ..+.|++
T Consensus 159 c~g~~K~~~l~~~~---~~~~~~~~aY-~Ds~~-D-~pmL~~a~~~~~vn-----p~~~l~~ 209 (211)
T PRK11590 159 CLGHEKVAQLERKI---GTPLRLYSGY-SDSKQ-D-NPLLYFCQHRWRVT-----PRGELQQ 209 (211)
T ss_pred CCChHHHHHHHHHh---CCCcceEEEe-cCCcc-c-HHHHHhCCCCEEEC-----ccHHhhc
Confidence 34445655555444 6677788898 99999 9 99999999999986 6666654
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=87.29 E-value=0.94 Score=46.52 Aligned_cols=42 Identities=14% Similarity=0.096 Sum_probs=32.1
Q ss_pred EEEEecCCCCCCC-------chhhHHHHHHHHHHHhhccCCCCeEEEEECCCC
Q 001705 751 VIAADCYDSDGNT-------TETFQATIKNVMKAAGLSLGLGRVGFILVTGSS 796 (1024)
Q Consensus 751 lIa~DlDGTl~~~-------~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~ 796 (1024)
+|.+|.||||... .-.+-+.+.++|++|+++ |+.++|+|+-+
T Consensus 6 ~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----G~~l~I~Tn~~ 54 (173)
T PRK06769 6 AIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKAN----HIKIFSFTNQP 54 (173)
T ss_pred EEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHC----CCEEEEEECCc
Confidence 4448999996332 112457889999999987 99999999865
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=86.89 E-value=3.5 Score=49.34 Aligned_cols=39 Identities=10% Similarity=0.172 Sum_probs=30.9
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEE
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLI 970 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVa 970 (1024)
.|...+...+++++ ++++++| ||+.+ | +.+-+.+|..++
T Consensus 386 ~kP~~~~~al~~l~--~~~~v~V-GDs~~-D-i~aAk~AG~~~I 424 (459)
T PRK06698 386 NKSDLVKSILNKYD--IKEAAVV-GDRLS-D-INAAKDNGLIAI 424 (459)
T ss_pred CCcHHHHHHHHhcC--cceEEEE-eCCHH-H-HHHHHHCCCeEE
Confidence 46667777777764 5889886 99999 9 999999997543
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=86.79 E-value=1 Score=51.28 Aligned_cols=60 Identities=17% Similarity=0.088 Sum_probs=41.0
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEE---CCCCHHHHHHHH-HhcCCCC
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILV---TGSSLGETMEAI-RRCTVNI 811 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~via---TGR~~~~~~~~l-~~~~i~~ 811 (1024)
.+.|||||||.+.+ .+.+...++++.|+.....-|+.+++. +|++.......+ +.+|++.
T Consensus 2 ~~ifD~DGvL~~g~-~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~ 65 (321)
T TIGR01456 2 GFAFDIDGVLFRGK-KPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDV 65 (321)
T ss_pred EEEEeCcCceECCc-cccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCC
Confidence 45699999987764 457888899999875200015555555 477788766655 8888863
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=85.58 E-value=0.76 Score=49.55 Aligned_cols=60 Identities=10% Similarity=0.057 Sum_probs=42.3
Q ss_pred ceeEEEEEecCCCCCCC-c-------------------------hhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHH--
Q 001705 747 QMLIVIAADCYDSDGNT-T-------------------------ETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLG-- 798 (1024)
Q Consensus 747 ~rlllIa~DlDGTl~~~-~-------------------------~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~-- 798 (1024)
.+...|.+|+|+|+++. . ....+...++++.+.++ |+.|+++|||+-.
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~----G~~V~~iT~R~~~~r 145 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSR----GVKVFFITGRPESQR 145 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHT----TEEEEEEEEEETTCH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHC----CCeEEEEecCCchhH
Confidence 34446669999996541 0 12224477899999988 9999999999755
Q ss_pred -HHHHHHHhcCCC
Q 001705 799 -ETMEAIRRCTVN 810 (1024)
Q Consensus 799 -~~~~~l~~~~i~ 810 (1024)
....-|...|++
T Consensus 146 ~~T~~nL~~~G~~ 158 (229)
T PF03767_consen 146 EATEKNLKKAGFP 158 (229)
T ss_dssp HHHHHHHHHHTTS
T ss_pred HHHHHHHHHcCCC
Confidence 455667777763
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=85.47 E-value=1.2 Score=47.43 Aligned_cols=43 Identities=16% Similarity=0.252 Sum_probs=35.0
Q ss_pred CCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEe
Q 001705 924 SFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLIL 971 (1024)
Q Consensus 924 ~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaM 971 (1024)
.+.+|..+++.+++++|+ +++++| ||+.| | +.|-+.+|..++.
T Consensus 152 ~~~~K~~~i~~~~~~~~~--~~~i~i-GDs~~-D-i~aa~~~~~~~~~ 194 (224)
T PLN02954 152 RSGGKAEAVQHIKKKHGY--KTMVMI-GDGAT-D-LEARKPGGADLFI 194 (224)
T ss_pred CCccHHHHHHHHHHHcCC--CceEEE-eCCHH-H-HHhhhcCCCCEEE
Confidence 456799999999999886 588886 99999 9 9998776665544
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=84.65 E-value=0.94 Score=47.54 Aligned_cols=34 Identities=12% Similarity=0.125 Sum_probs=27.3
Q ss_pred HHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEec
Q 001705 936 SIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILR 972 (1024)
Q Consensus 936 ~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMg 972 (1024)
++.++...++++++ ||+.| | +.|.+.+|.|++.+
T Consensus 137 l~~~~~~~~~~v~i-GDs~~-D-~~~~~aa~~~v~~~ 170 (205)
T PRK13582 137 VKALKSLGYRVIAA-GDSYN-D-TTMLGEADAGILFR 170 (205)
T ss_pred HHHHHHhCCeEEEE-eCCHH-H-HHHHHhCCCCEEEC
Confidence 33444555788886 99999 9 99999999999866
|
|
| >COG4370 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=84.59 E-value=21 Score=39.36 Aligned_cols=142 Identities=20% Similarity=0.272 Sum_probs=81.3
Q ss_pred CCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCC------CCCCCCH
Q 001705 486 PDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPK------HHKQSDV 559 (1024)
Q Consensus 486 ld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g------~~~~~el 559 (1024)
++...|+..++.++-.+... ...+++...-.+. +. ...+..+.++.+|.+.-...+ +++++..
T Consensus 237 pea~~nl~~il~slcal~~~--~a~vvfw~ai~~~---lp------l~~l~~l~e~~gWq~~ad~~~kdnc~l~lsqqsf 305 (412)
T COG4370 237 PEAQTNLAVILGSLCALPAM--FALVVFWAAIAPE---LP------LLLLWTLEERQGWQPLADRFGKDNCSLWLSQQSF 305 (412)
T ss_pred hHHHhhHHHHHHHHhhhHHH--HHHHHHHhccCcC---CC------HHHHHHHHHhcCcchhhhhhccCceEEEEeHHHH
Confidence 55678888888866555311 1111111110111 10 233445555556554322122 3456788
Q ss_pred HHHHHHhhcCCcEEEecCCCCCC-CHHHHHHHHcCCcEEEcCCCCch------hhhc--cCCcEEEeCCCCHHHHHHHHH
Q 001705 560 PDIYRLAAKTKGVFINPALVEPF-GLTIIEAAAYGLPVVATKNGGPV------DILK--ALNNGLLVDPHDQNAIADALL 630 (1024)
Q Consensus 560 ~~ly~~A~~~~dv~v~ps~~Egf-gl~llEAmA~G~PVVat~~Gg~~------eii~--~~~~Gllv~p~d~~~la~aI~ 630 (1024)
.+++..| |+.+ +| |...-.+.-.|+|||+...-|+. +--. -+..=.++.| ..+.+..+.
T Consensus 306 adiLH~a----daal------gmAGTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~--~aq~a~~~~ 373 (412)
T COG4370 306 ADILHAA----DAAL------GMAGTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRP--EAQAAAQAV 373 (412)
T ss_pred HHHHHHH----HHHH------HhccchHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCC--chhhHHHHH
Confidence 9999999 6755 33 44444567789999998865552 1100 0223356665 334455555
Q ss_pred H-HHhCHHHHHHHHHHHHHHH
Q 001705 631 K-LLADKNMWSECRKNGLKNI 650 (1024)
Q Consensus 631 ~-ll~d~~~~~~~~~~~~~~~ 650 (1024)
+ ++.||+....++.|+++++
T Consensus 374 q~ll~dp~r~~air~nGqrRi 394 (412)
T COG4370 374 QELLGDPQRLTAIRHNGQRRI 394 (412)
T ss_pred HHHhcChHHHHHHHhcchhhc
Confidence 5 9999999999999999987
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=84.58 E-value=1.1 Score=47.52 Aligned_cols=50 Identities=14% Similarity=0.098 Sum_probs=37.6
Q ss_pred CCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhc
Q 001705 924 SFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLH 984 (1024)
Q Consensus 924 ~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~ 984 (1024)
.|..|-..|+..+ +.+.+...++ |||.| | .+||+.+++++++. .++.|.+
T Consensus 159 ~g~~Kv~rl~~~~---~~~~~~~~aY-sDS~~-D-~pmL~~a~~~~~Vn-----p~~~L~~ 208 (210)
T TIGR01545 159 LGHEKVAQLEQKI---GSPLKLYSGY-SDSKQ-D-NPLLAFCEHRWRVS-----KRGELQQ 208 (210)
T ss_pred CChHHHHHHHHHh---CCChhheEEe-cCCcc-c-HHHHHhCCCcEEEC-----cchHhcc
Confidence 3445666565554 5577778898 99999 9 99999999999986 5655543
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.43 E-value=4 Score=51.06 Aligned_cols=57 Identities=18% Similarity=0.271 Sum_probs=47.5
Q ss_pred EEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccc
Q 001705 918 RLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 918 ~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad 987 (1024)
+-|++|. .|..=++.|.+.- ..++++||+-| | -.-|..+..||+|| .+++-..++||
T Consensus 766 ~aev~P~--~K~~~Ik~lq~~~-----~~VaMVGDGIN-D-aPALA~AdVGIaig----~gs~vAieaAD 822 (951)
T KOG0207|consen 766 YAEVLPE--QKAEKIKEIQKNG-----GPVAMVGDGIN-D-APALAQADVGIAIG----AGSDVAIEAAD 822 (951)
T ss_pred EeccCch--hhHHHHHHHHhcC-----CcEEEEeCCCC-c-cHHHHhhccceeec----cccHHHHhhCC
Confidence 5677774 5888888887654 34566799999 9 99999999999999 99888889999
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=83.59 E-value=1.9 Score=49.54 Aligned_cols=58 Identities=10% Similarity=0.096 Sum_probs=42.6
Q ss_pred ceeEEEEEecCCCCCCC-----------chhhHHHHHHHHHHHhhccCCCCeEEEEECCC---------------CHHHH
Q 001705 747 QMLIVIAADCYDSDGNT-----------TETFQATIKNVMKAAGLSLGLGRVGFILVTGS---------------SLGET 800 (1024)
Q Consensus 747 ~rlllIa~DlDGTl~~~-----------~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR---------------~~~~~ 800 (1024)
+++++ +|-||||... +..+-+.+.++|.+|+++ |+.++|+|.- +...+
T Consensus 2 ~k~l~--lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~----G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i 75 (354)
T PRK05446 2 QKILF--IDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKA----GYKLVMVTNQDGLGTDSFPQEDFDPPHNLM 75 (354)
T ss_pred CcEEE--EeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhC----CCeEEEEECCccccCccccHHHHhhHHHHH
Confidence 34555 8999995542 234557789999999887 9999999984 34457
Q ss_pred HHHHHhcCCC
Q 001705 801 MEAIRRCTVN 810 (1024)
Q Consensus 801 ~~~l~~~~i~ 810 (1024)
...++.+++.
T Consensus 76 ~~iL~~~gl~ 85 (354)
T PRK05446 76 MQIFESQGIK 85 (354)
T ss_pred HHHHHHcCCc
Confidence 7788888873
|
|
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=83.53 E-value=1.4 Score=46.24 Aligned_cols=47 Identities=6% Similarity=0.099 Sum_probs=36.9
Q ss_pred cCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCce-EEec
Q 001705 923 PSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKT-LILR 972 (1024)
Q Consensus 923 p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~g-VaMg 972 (1024)
|.-..|..=++++++++|+++++++.| -|... . ++--+..|.- +...
T Consensus 158 Pdp~iK~yHle~ll~~~gl~peE~LFI-DD~~~-N-VeaA~~lGi~ai~f~ 205 (219)
T PTZ00445 158 PMPLDKSYHLKQVCSDFNVNPDEILFI-DDDMN-N-CKNALKEGYIALHVT 205 (219)
T ss_pred CCccchHHHHHHHHHHcCCCHHHeEee-cCCHH-H-HHHHHHCCCEEEEcC
Confidence 455678888899999999999999987 88766 5 8888888864 4444
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=82.95 E-value=1.9 Score=41.47 Aligned_cols=42 Identities=24% Similarity=0.165 Sum_probs=34.6
Q ss_pred CCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccc
Q 001705 942 DLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 942 ~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad 987 (1024)
+-+.+++ +||+.| | +-||+.+..||+.=.- |++++.++..||
T Consensus 92 ~~~k~vm-VGnGaN-D-~laLr~ADlGI~tiq~-e~v~~r~l~~AD 133 (152)
T COG4087 92 RYEKVVM-VGNGAN-D-ILALREADLGICTIQQ-EGVPERLLLTAD 133 (152)
T ss_pred CCcEEEE-ecCCcc-h-HHHhhhcccceEEecc-CCcchHHHhhch
Confidence 3355667 599999 9 9999999999866433 699999999999
|
|
| >PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides | Back alignment and domain information |
|---|
Probab=82.66 E-value=10 Score=39.54 Aligned_cols=73 Identities=12% Similarity=0.067 Sum_probs=31.6
Q ss_pred cceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCH
Q 001705 304 WPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTR 383 (1024)
Q Consensus 304 ~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~ 383 (1024)
+||++.......-.--...+++.|+|+++.-=-+ +..-...|..++.+ -+.+++..|.|.+.|+
T Consensus 95 ~P~~~i~~EtElWPnll~~a~~~~ip~~LvNarl--------------s~~s~~~~~~~~~~--~r~~l~~f~~i~aqs~ 158 (186)
T PF04413_consen 95 RPDLLIWVETELWPNLLREAKRRGIPVVLVNARL--------------SERSFRRYRRFPFL--FRPLLSRFDRILAQSE 158 (186)
T ss_dssp --SEEEEES----HHHHHH-----S-EEEEEE----------------------------HH--HHHHGGG-SEEEESSH
T ss_pred CCCEEEEEccccCHHHHHHHhhcCCCEEEEeeee--------------ccccchhhhhhHHH--HHHHHHhCCEEEECCH
Confidence 6898776654333333334455689987754322 11111223222222 4567899999999999
Q ss_pred HHHHHHHhc
Q 001705 384 QEIEMQWGL 392 (1024)
Q Consensus 384 ~~~~~~~~~ 392 (1024)
...+.+..+
T Consensus 159 ~da~r~~~l 167 (186)
T PF04413_consen 159 ADAERFRKL 167 (186)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHc
Confidence 988876443
|
Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=82.66 E-value=2.1 Score=45.50 Aligned_cols=36 Identities=6% Similarity=-0.009 Sum_probs=25.5
Q ss_pred HHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCC
Q 001705 771 IKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVN 810 (1024)
Q Consensus 771 ~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~ 810 (1024)
+.++|+.++++ |+.++|+||-....+..+++.+++.
T Consensus 90 ~~~~l~~l~~~----g~~~~IvS~~~~~~~~~~l~~~~i~ 125 (219)
T TIGR00338 90 AEELVKTLKEK----GYKVAVISGGFDLFAEHVKDKLGLD 125 (219)
T ss_pred HHHHHHHHHHC----CCEEEEECCCcHHHHHHHHHHcCCC
Confidence 34455555554 7888888888877888888887763
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=82.13 E-value=1.1e+02 Score=35.63 Aligned_cols=84 Identities=18% Similarity=0.339 Sum_probs=50.9
Q ss_pred CCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCC-CCchhhhccC-CcEE--EeCCCC
Q 001705 546 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKN-GGPVDILKAL-NNGL--LVDPHD 621 (1024)
Q Consensus 546 ~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~-Gg~~eii~~~-~~Gl--lv~p~d 621 (1024)
.++.+..--..+++-..++.+ |++|-.-+ -.++=|++.|+|+|+=.. +-...+.++. -.++ -+.|.|
T Consensus 266 ~~i~~~~d~~~~~~~~~l~~~----dl~Vg~R~-----HsaI~al~~g~p~i~i~Y~~K~~~l~~~~gl~~~~~~i~~~~ 336 (385)
T COG2327 266 AEILVSSDEYAEELGGILAAC----DLIVGMRL-----HSAIMALAFGVPAIAIAYDPKVRGLMQDLGLPGFAIDIDPLD 336 (385)
T ss_pred cceEeecchHHHHHHHHhccC----ceEEeehh-----HHHHHHHhcCCCeEEEeecHHHHHHHHHcCCCcccccCCCCc
Confidence 455543332235666788888 78774322 346779999999998653 2233333322 2233 445678
Q ss_pred HHHHHHHHHHHHhC-HHH
Q 001705 622 QNAIADALLKLLAD-KNM 638 (1024)
Q Consensus 622 ~~~la~aI~~ll~d-~~~ 638 (1024)
.+.+..+..+.++. +++
T Consensus 337 ~~~l~~~~~e~~~~~~~~ 354 (385)
T COG2327 337 AEILSAVVLERLTKLDEL 354 (385)
T ss_pred hHHHHHHHHHHHhccHHH
Confidence 88888888887774 443
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=80.65 E-value=4.4 Score=48.25 Aligned_cols=143 Identities=10% Similarity=0.150 Sum_probs=80.5
Q ss_pred CCCcEEEEEeCCC--CCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchH-HHHHHHHHHHHcCCCCCEEeC
Q 001705 475 PHKPTILALSRPD--PKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSV-VLTTVLKLIDKYDLYGQVAYP 551 (1024)
Q Consensus 475 ~~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~-~~~~i~~~i~~~~l~~~V~~~ 551 (1024)
++..+.+++|... +.+-+..+..+++... . .+.-++......+.-...... +-. ...++.. ...+.+.
T Consensus 269 ~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~----~-~FlW~~r~~~~~~~~~~~~~~~lp~---gf~er~~-~~g~~v~ 339 (451)
T PLN03004 269 EKSVVFLCFGSLGLFSKEQVIEIAVGLEKSG----Q-RFLWVVRNPPELEKTELDLKSLLPE---GFLSRTE-DKGMVVK 339 (451)
T ss_pred CCceEEEEecccccCCHHHHHHHHHHHHHCC----C-CEEEEEcCCccccccccchhhhCCh---HHHHhcc-CCcEEEE
Confidence 3466788888873 3455666777777652 2 332244321110000000000 001 1111111 2357778
Q ss_pred CCCCCCCHHHHHHHhhcCCcE--EEecCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhh-ccCCcEEEeCC-----
Q 001705 552 KHHKQSDVPDIYRLAAKTKGV--FINPALVEPFGLTIIEAAAYGLPVVATKNGG----PVDIL-KALNNGLLVDP----- 619 (1024)
Q Consensus 552 g~~~~~el~~ly~~A~~~~dv--~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg----~~eii-~~~~~Gllv~p----- 619 (1024)
+++||.+ +++.+ ++ ||. -+--++++||+++|+|+|+-...+ ....+ ...+.|+.++.
T Consensus 340 ~W~PQ~~---iL~H~----~v~~FvT----H~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~ 408 (451)
T PLN03004 340 SWAPQVP---VLNHK----AVGGFVT----HCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGF 408 (451)
T ss_pred eeCCHHH---HhCCC----ccceEec----cCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCc
Confidence 8988875 66666 45 552 223468899999999999976432 23333 33467888753
Q ss_pred CCHHHHHHHHHHHHhCHH
Q 001705 620 HDQNAIADALLKLLADKN 637 (1024)
Q Consensus 620 ~d~~~la~aI~~ll~d~~ 637 (1024)
-+.++++++|.+++.+++
T Consensus 409 ~~~e~l~~av~~vm~~~~ 426 (451)
T PLN03004 409 VSSTEVEKRVQEIIGECP 426 (451)
T ss_pred cCHHHHHHHHHHHhcCHH
Confidence 268999999999998754
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1024 | ||||
| 2r60_A | 499 | Structure Of Apo Sucrose Phosphate Synthase (Sps) O | 3e-47 | ||
| 3s28_A | 816 | The Crystal Structure Of Sucrose Synthase-1 In Comp | 3e-36 | ||
| 3s27_A | 816 | The Crystal Structure Of Sucrose Synthase-1 From Ar | 2e-35 | ||
| 3c4q_A | 426 | Structure Of The Retaining Glycosyltransferase Msha | 2e-05 | ||
| 3c48_A | 438 | Structure Of The Retaining Glycosyltransferase Msha | 2e-05 |
| >pdb|2R60|A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii Length = 499 | Back alignment and structure |
|
| >pdb|3S28|A Chain A, The Crystal Structure Of Sucrose Synthase-1 In Complex With A Breakdown Product Of The Udp-Glucose Length = 816 | Back alignment and structure |
|
| >pdb|3S27|A Chain A, The Crystal Structure Of Sucrose Synthase-1 From Arabidopsis Thaliana And Its Functional Implications. Length = 816 | Back alignment and structure |
|
| >pdb|3C4Q|A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp Length = 426 | Back alignment and structure |
|
| >pdb|3C48|A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. Length = 438 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1024 | |||
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 1e-165 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 1e-155 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 3e-93 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 2e-37 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 8e-35 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 3e-29 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 4e-29 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 7e-29 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 2e-28 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 8e-25 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 1e-20 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 4e-18 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 1e-10 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 2e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-06 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 4e-08 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 1e-07 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 5e-05 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 2e-04 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 6e-04 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 7e-04 |
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 493 bits (1271), Expect = e-165
Identities = 150/553 (27%), Positives = 233/553 (42%), Gaps = 69/553 (12%)
Query: 167 SRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIAS 226
+R ++ ++ G + D GGQ+ YV E++ ALA E +VD++TR+I
Sbjct: 5 TRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALA--EMGVQVDIITRRIKD 62
Query: 227 PEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHI 286
GE + I+RIP G DK++ KE LWPY+HE+V+ +N
Sbjct: 63 ENWPEFSGEIDYYQETN-------KVRIVRIPFG-GDKFLPKEELWPYLHEYVNKIINFY 114
Query: 287 VNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLL 346
+ +P V+ HY D G L +P TGHSLG K E+L
Sbjct: 115 REEGK------------FPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLGAQKMEKLN 162
Query: 347 KQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQW--GLYDGFDLKLERKL 404
K+++ +K RRI AE L + ++ ++ ST QE Q+ LY G +
Sbjct: 163 VNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDD-- 220
Query: 405 RVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPM 464
+ VIPPG++ + + +
Sbjct: 221 ---------------DKFSVIPPGVNTRVFDGEY------------------GDKIKAKI 247
Query: 465 WSEVMRFFTNP--HKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGN----R 518
+ R + P I+A SR D KKN L++A+ + + L++ AN+ L L
Sbjct: 248 TKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPF 307
Query: 519 DDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAL 578
+D +L +++LID D G+V+ + Q ++ Y A VF +
Sbjct: 308 EDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSF 367
Query: 579 VEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNM 638
EPFGL +EA A GLP V T+NGGP +IL G+LVDP D IA LLK +
Sbjct: 368 YEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFESEET 427
Query: 639 WSECRKNGLKNI-HRFSWPEHCRNYLSHVEHSRNRHPNS-HLEIMTIPGEPLSDSLRDVE 696
WS ++ G + + R++W E R YL ++ +R + IP +
Sbjct: 428 WSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRKDEEDEGGSLNIPDYF--TNPGASN 485
Query: 697 DFSLRFSMEGDFK 709
D L + +K
Sbjct: 486 DEKLLDTFNKLWK 498
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 479 bits (1235), Expect = e-155
Identities = 154/651 (23%), Positives = 267/651 (41%), Gaps = 76/651 (11%)
Query: 93 HLARKKKQIAWEDAQRLAKRRLEREQGRNDAADDLSE-LSEGEK--------EKGDSINA 143
H + K + E Q L + + A+ SE L E + E+G +
Sbjct: 187 HSHQGKNLMLSEKIQNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERGWG-DN 245
Query: 144 SESLKEIPRINSDMQIWSEDDKSSRNL-------YIVLISMHGLVRGDNMEIGRDSDTGG 196
+E + ++ R+ D+ + L +V++S HG DN+ +G DTGG
Sbjct: 246 AERVLDMIRLLLDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNV-LGY-PDTGG 303
Query: 197 QVKYVVELARALAN----------TEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDG 246
QV Y+++ RAL R+ +LTR + V ++ GE E +
Sbjct: 304 QVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLP-DAVGTTCGERLERVY----- 357
Query: 247 TGSCGAYIIRIPCG----ARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKP 302
S I+R+P K+I++ +WPY+ + + A +
Sbjct: 358 -DSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKEL-----------N 405
Query: 303 TWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIM 362
P +I G+Y+D VA+ L+ L V H+L + K K ++ Y
Sbjct: 406 GKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTK---YPDSDIYWKKLDDKYHFS 462
Query: 363 RRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRM 422
+ A+ ++ ++ ++TST QEI ++ L R V F P+
Sbjct: 463 CQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLP-GLYRVVHGIDVFDPKF 521
Query: 423 VVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILA 482
++ PG D S + + + + E + + KP +
Sbjct: 522 NIVSPGADMSIYFPYT----EEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFT 577
Query: 483 LSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKY 542
++R D KN++ L++ +G+ LRELAN+ ++ G+R E N + + LI++Y
Sbjct: 578 MARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRK-ESKDNEEKAEMKKMYDLIEEY 636
Query: 543 DLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKN 601
L GQ + + ++YR TKG F+ PAL E FGLT++EA GLP AT
Sbjct: 637 KLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK 696
Query: 602 GGPVDILKALNNGLLVDPHD----QNAIADALLKLLADKNMWSECRKNGLKNIHR-FSWP 656
GGP +I+ +G +DP+ + +AD K D + W E K GL+ I ++W
Sbjct: 697 GGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQ 756
Query: 657 EHCRNYLS---------HVEHSRNRHPNSHLEIM-TIPGEPLSDSLRDVED 697
+ + L+ HV + +LE+ + PL+ ++ +D
Sbjct: 757 IYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFYALKYRPLAQAVPLAQD 807
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 302 bits (776), Expect = 3e-93
Identities = 98/516 (18%), Positives = 174/516 (33%), Gaps = 101/516 (19%)
Query: 167 SRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIAS 226
++ + +ISMH ++ D+GG Y++ A LA + VD+ TR
Sbjct: 18 GSHMRVAMISMHT----SPLQQPGTGDSGGMNVYILSTATELA--KQGIEVDIYTRATRP 71
Query: 227 PEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHI 286
+ + +I I G + ++KE L + F G L+
Sbjct: 72 SQGEIVRVAE--------------NLRVINIAAGPYE-GLSKEELPTQLAAFTGGMLSFT 116
Query: 287 VNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLL 346
+ +IH HY +G+V L +P++ T H+L K
Sbjct: 117 ------------RREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKNSYRD 164
Query: 347 KQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRV 406
+ R E+ +D ++++ +T++E++
Sbjct: 165 DSDT--------PESEARRICEQQLVDNADVLAVNTQEEMQDL----------------- 199
Query: 407 RRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWS 466
+ + R+ V+ PG D +L S + T+ R
Sbjct: 200 -----MHHYDADPDRISVVSPGAD-------------VELYSPGNDRATERSRR------ 235
Query: 467 EVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLIL-GNRDDIEDMS 525
H + + R P K L+KA N+ +I+ G
Sbjct: 236 ---ELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNAT- 291
Query: 526 NSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLT 585
T + ++ + ++ + S++ +YR A + P+ E FGL
Sbjct: 292 ------PDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAA----DIVAVPSFNESFGLV 341
Query: 586 IIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKN 645
+EA A G PV+A + GG + GLLVD H +A ADAL LL D ++
Sbjct: 342 AMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDDDETRIRMGED 401
Query: 646 GLKNIHRFSWPEHCRN----YLSHVEHSRNRHPNSH 677
+++ FSW Y + + H
Sbjct: 402 AVEHARTFSWAATAAQLSSLYNDAIANENVDGETHH 437
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 2e-37
Identities = 71/477 (14%), Positives = 151/477 (31%), Gaps = 132/477 (27%)
Query: 195 GGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYI 254
GG EL + LA G + + +T P + Y
Sbjct: 27 GGSGVVGTELGKQLAE-RG-HEIHFITS--GLPFRLNKVYP---------------NIYF 67
Query: 255 IRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYAD 314
+ + PY + +A + E ++H HYA
Sbjct: 68 HEVTV----NQYSVFQYPPYD-----------LALASKMAEVAQRENLD---ILHVHYAI 109
Query: 315 AGEVAAHLSGAL---NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELG 371
+ A+L+ + + +V T H DI G
Sbjct: 110 PHAICAYLAKQMIGERIKIVTTLHGT----------------DITVLGSDPSLNNLIRFG 153
Query: 372 LDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDF 431
++ S++V + I ++ + + + +D
Sbjct: 154 IEQSDVVTAVSHSLINE-----------THELVKPNK------------DIQTVYNFID- 189
Query: 432 SYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKN 491
+ D TQ K+ + + + ++ +S K
Sbjct: 190 --------------ERVYFKRDMTQLKK----------EYGISESEKILIHISNFRKVKR 225
Query: 492 VTTLLKAFGECQPLRELANMTLIL-GN---RDDIEDMSNSSSVVLTTVLKLIDKYDLYGQ 547
V +++AF + + + L+L G+ I + + L + D+ G
Sbjct: 226 VQDVVQAFAK---IVTEVDAKLLLVGDGPEFCTILQLVKN--------LHIEDRVLFLG- 273
Query: 548 VAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDI 607
KQ +V ++ ++ + + + E FGL ++EA A G+P + T+ GG ++
Sbjct: 274 -------KQDNVAELLAMSD----LMLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEV 322
Query: 608 LKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIH-RFSWPEHCRNYL 663
++ + G L + D +AD ++LL D+ + + ++++ +F + Y
Sbjct: 323 IQHGDTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIVSQYE 379
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 8e-35
Identities = 59/462 (12%), Positives = 120/462 (25%), Gaps = 119/462 (25%)
Query: 195 GGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYI 254
GG + + +A +A G V + T+ +
Sbjct: 14 GGLQRDFMRIASTVAA-RGH-HVRVYTQSWEGDCPK--------------------AFEL 51
Query: 255 IRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYAD 314
I++P + + E+ NH+ + G
Sbjct: 52 IQVPVKSHTNH-------GRNAEYYAWVQNHLKEHP--------------ADRVVGFNKM 90
Query: 315 AGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDA 374
G + V + + Y+ E
Sbjct: 91 PGLDVYFAADVCYAEKVAQEK--------------GFLYRLTSRYRHYAAFERATFEQGK 136
Query: 375 SEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYV 434
S ++ T ++ + R ++PPG+
Sbjct: 137 STKLMMLTDKQ----------------------IADFQKHYQTEPERFQILPPGIYPDRK 174
Query: 435 TTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTT 494
++ N R ++ + + +L + +K V
Sbjct: 175 YSEQI-----------PNSREIYRQ----------KNGIKEQQNLLLQVGSDFGRKGVDR 213
Query: 495 LLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHH 554
++A P N L + +D L +K + V +
Sbjct: 214 SIEALASL-PESLRHNTLLFVVGQDKPRKF-----------EALAEKLGVRSNVHFFSG- 260
Query: 555 KQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNG 614
++DV ++ A + ++PA E G+ ++EA GLPV+ T G + N G
Sbjct: 261 -RNDVSELMAAAD----LLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCG 315
Query: 615 LLV-DPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSW 655
++ +P Q + + L K L + +N
Sbjct: 316 TVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDL 357
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 3e-29
Identities = 60/392 (15%), Positives = 119/392 (30%), Gaps = 88/392 (22%)
Query: 277 EFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHS 336
+ + +N+ R + ++ + H + P + H
Sbjct: 102 KLTEEMKELYLNVNRENSKFIDLSSFD---YVLVHDPQPAALIEFY--EKKSPWLWRCH- 155
Query: 337 LGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGF 396
L ++ +RR ++ + + + +
Sbjct: 156 ------------IDLSSPNREFWEFLRRF------VEKYDRYIFHLPEYV---------- 187
Query: 397 DLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQ 456
+ + R + V++PP +D + +
Sbjct: 188 ------QPELDRNK-----------AVIMPPSIDPLSEKNVE-----------LKQTEIL 219
Query: 457 SKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLIL- 515
RF +P KP I +SR DP K + +++ + + ++ + L+L
Sbjct: 220 RILE---------RFDVDPEKPIITQVSRFDPWKGIFDVIEIYRK--VKEKIPGVQLLLV 268
Query: 516 --GNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVF 573
DD E T+ K+ + YD+ H + +V R + V
Sbjct: 269 GVMAHDDPE----GWIYFEKTLRKIGEDYDVKVLTNLIGVHAR-EVNAFQRASD----VI 319
Query: 574 INPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLL 633
+ ++ E FGLT+ EA G PV+ GG + G LV + + +L LL
Sbjct: 320 LQMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLVRDAN--EAVEVVLYLL 377
Query: 634 ADKNMWSECRKNGLKNIH-RFSWPEHCRNYLS 664
+ E + + F +H YL
Sbjct: 378 KHPEVSKEMGAKAKERVRKNFIITKHMERYLD 409
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 4e-29
Identities = 29/183 (15%), Positives = 67/183 (36%), Gaps = 30/183 (16%)
Query: 478 PTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGN---RDDIEDMSNSSSVVLT 533
I + R +KN + L+KA + ++ L + G I+
Sbjct: 3 FKIAMVGRYSNEKNQSVLIKAVAL---SKYKQDIVLLLKGKGPDEKKIK----------- 48
Query: 534 TVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYG 593
L K + + + +++ +I + ++++ A VE + +EA + G
Sbjct: 49 ---LLAQKLGVKAEFGFVNS---NELLEILKTCT----LYVHAANVESEAIACLEAISVG 98
Query: 594 L-PVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHR 652
+ PV+A AL+ L +P++ ++ + L +K + K+
Sbjct: 99 IVPVIANSPLSATRQF-ALDERSLFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSALN 157
Query: 653 FSW 655
++
Sbjct: 158 YTL 160
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 7e-29
Identities = 73/485 (15%), Positives = 142/485 (29%), Gaps = 146/485 (30%)
Query: 195 GGQVKYVVELARALANTEGVYRVDLLTR-QIASPEVDSSYGEPNEMLSCPSDGTGSCGAY 253
GG Y+ + E + V T+ + D +
Sbjct: 19 GGIQSYLRDFIATQD-PESI-VVFASTQNAEEAHAYDKTLDYE----------------- 59
Query: 254 IIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYA 313
+IR P L A A+ E + + + A
Sbjct: 60 VIRWP--------RSVMLPTP-------------TTAHAMAEIIREREID---NVWFGAA 95
Query: 314 -DAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGL 372
+A A ++ + H LP S + +R+I
Sbjct: 96 APLALMAGTAKQAGASKVIASTHGHEVG-------WSMLP----GSRQSLRKI------G 138
Query: 373 DASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFS 432
+++ ++ + R + G P +P G+D
Sbjct: 139 TEVDVLTYISQYTLR-----------------RFKSAFGSH------PTFEHLPSGVDVK 175
Query: 433 YVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNV 492
T D++ +++ + P I SR P+K
Sbjct: 176 RFTPAT------------PEDKSATRK----------KLGFTDTTPVIACNSRLVPRKGQ 213
Query: 493 TTLLKAFGECQPLRELANMTLILG----NRDDIEDMSN--SSSVVLTTVLKLIDKYDLYG 546
+L+KA + + + L++ + ++ S +V G
Sbjct: 214 DSLIKAMPQ--VIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFL------------G 259
Query: 547 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAL-------VEPFGLTIIEAAAYGLPVVAT 599
++ Y D+ + A +F PA VE G+ +EA A G+PV+A
Sbjct: 260 RLEYQ------DMINTLAAAD----IFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAG 309
Query: 600 KNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIH-RFSWPEH 658
+GG + + GL+V+ D + +++ L++LL D + G ++ +SW
Sbjct: 310 TSGGAPETVTP-ATGLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSWEIM 368
Query: 659 CRNYL 663
Sbjct: 369 GERLT 373
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 2e-28
Identities = 81/467 (17%), Positives = 135/467 (28%), Gaps = 136/467 (29%)
Query: 195 GGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYI 254
GG +V++LA L + G V +L ++ G
Sbjct: 35 GGVQSHVLQLAEVLRD-AGH-EVSVLAPASPHVKLP---------------DYVVSGGKA 77
Query: 255 IRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYAD 314
+ IP + L R + + + G V+H H +
Sbjct: 78 VPIP-----------------YNGSVARLRFGPATHRKVKKWIAEGDFD---VLHIHEPN 117
Query: 315 AGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDA 374
A ++ A P+V T H+ + QG L +I
Sbjct: 118 APSLSMLALQAAEGPIVATFHTSTTKSLTLSVFQGILRP-------YHEKI-------IG 163
Query: 375 SEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYV 434
V R+ V IP G+D
Sbjct: 164 RIAVSDLARRWQM----------------------------EALGSDAVEIPNGVD---- 191
Query: 435 TTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPD-PKKNVT 493
S + P T+L L R D P+K +
Sbjct: 192 --------------------VASFADAPL------LDGYPREGRTVLFLGRYDEPRKGMA 225
Query: 494 TLLKAFGECQPLRELANMTLIL---GNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAY 550
LL A + + ++ +++ G+ D++ + L GQV
Sbjct: 226 VLLAALPKL--VARFPDVEILIVGRGDEDELREQ----------AGDLAGHLRFLGQVD- 272
Query: 551 PKHHKQSDVPDIYRLAAKTKGVFINPAL-VEPFGLTIIEAAAYGLPVVATKNGGPVDILK 609
+ R A V+ P L E FG+ ++EA A G VVA+ +L
Sbjct: 273 -----DATKASAMRSAD----VYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRRVLA 323
Query: 610 ALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWP 656
+ G LV D + +A AL+ +L D + + + +HR+ W
Sbjct: 324 DGDAGRLVPVDDADGMAAALIGILEDDQLRAGYVARASERVHRYDWS 370
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 8e-25
Identities = 44/188 (23%), Positives = 77/188 (40%), Gaps = 24/188 (12%)
Query: 467 EVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLIL-GNRDDIEDMS 525
E +F + L+++R P+K + L+ F ++L + L + G +
Sbjct: 13 ETSKFKFKCYGDFWLSVNRIYPEKRIELQLEVF------KKLQDEKLYIVGWFSKGDHAE 66
Query: 526 NSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLT 585
+ ++ D G V + ++ D+Y K + A E FGLT
Sbjct: 67 RYARKIMK---IAPDNVKFLGSV------SEEELIDLYS-RCK---GLLCTAKDEDFGLT 113
Query: 586 IIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKN 645
IEA A G PV+A GG + + G LV+ D N I DA+ K+ + + + +K+
Sbjct: 114 PIEAMASGKPVIAVNEGGFKETVINEKTGYLVNA-DVNEIIDAMKKVSKNPDKF---KKD 169
Query: 646 GLKNIHRF 653
+ F
Sbjct: 170 CFRRAKEF 177
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 94.8 bits (235), Expect = 1e-20
Identities = 27/184 (14%), Positives = 63/184 (34%), Gaps = 22/184 (11%)
Query: 475 PHKPTILALSRPD-PKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLT 533
+ IL RP + T +++A + +N I+ + +D+
Sbjct: 239 QKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKDI--------- 289
Query: 534 TVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYG 593
L + G++ D D+ + ++ + I+ + +E A +G
Sbjct: 290 -ALGKGIHLNSLGKLT------LEDYADLLKRSS----IGISLMISPHPSYPPLEMAHFG 338
Query: 594 LPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRF 653
L V+ D+ +N + ++ + IA+ L++L N +K +
Sbjct: 339 LRVITN-KYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFNNRDVDKKESSNMMFYI 397
Query: 654 SWPE 657
+
Sbjct: 398 NEFN 401
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 87.2 bits (215), Expect = 4e-18
Identities = 30/216 (13%), Positives = 60/216 (27%), Gaps = 26/216 (12%)
Query: 460 NLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLR-ELANMTLILGNR 518
+++ L ++R +K + + A + L +
Sbjct: 167 KTIYDARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHH 226
Query: 519 DDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAL 578
+ D+ + + L L + V +Y V +N +
Sbjct: 227 ESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACD----VIVNCSS 282
Query: 579 VEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPH------------------ 620
E FGL E A G P++ + GG D + + P
Sbjct: 283 GEGFGLCSAEGAVLGKPLIISAVGGADDYFSG-DCVYKIKPSAWISVDDRDGIGGIEGII 341
Query: 621 DQNAIADALLKLLADKNMWSECRKNGLKNIH-RFSW 655
D + + +A D+ E K + + +W
Sbjct: 342 DVDDLVEA-FTFFKDEKNRKEYGKRVQDFVKTKPTW 376
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* Length = 244 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 1e-10
Identities = 32/204 (15%), Positives = 74/204 (36%), Gaps = 32/204 (15%)
Query: 760 DGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVC 819
D E Q + + TG S E ++ + D+ +
Sbjct: 17 DQQALEHLQEYLG--DRRGN-------FYLAYATGRSYHSARELQKQVGLMEPDY--WLT 65
Query: 820 NSGSELYFPWRDMVADGDYEAHVEYRWPGENVRSVVP--RVARAEDGAEDDIVGFVDASS 877
GSE+Y P + D + ++ W + ++++ + + E +
Sbjct: 66 AVGSEIYHP-EGL--DQHWADYLSEHWQRDILQAIADGFEALKPQSPLEQNPWKI----- 117
Query: 878 SRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSI 937
SY + P A +D + + L+ G ++++ ++++P +++ A +YL
Sbjct: 118 ----SYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKD-VDLLPQRSNKGNATQYLQQ 172
Query: 938 RWGIDLSKMVVFVGEKGDT--DYE 959
++ S+ +V GD+ D
Sbjct: 173 HLAMEPSQTLVC----GDSGNDIG 192
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 | Back alignment and structure |
|---|
Score = 62.5 bits (152), Expect = 2e-10
Identities = 32/197 (16%), Positives = 53/197 (26%), Gaps = 33/197 (16%)
Query: 475 PHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLIL-GNRDDIEDMSNSSSVVLT 533
+ +L + R P K L+L G + E
Sbjct: 160 AKEDFLLFMGRVSPHKGALEAAAFA-------HACGRRLVLAGPAWEPEYFD-------E 205
Query: 534 TVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAA------KTKGVFINPALVEPFGLTII 587
+ + G+V D+ A + EP +
Sbjct: 206 ITRRYGSTVEPIGEVG------GERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVS 259
Query: 588 EAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGL 647
EAA G PVV T NG +I + + V + + D + LA E R+
Sbjct: 260 EAAVSGTPVVGTGNGCLAEI---VPSVGEVVGYGTDFAPDEARRTLAGLPASDEVRR--- 313
Query: 648 KNIHRFSWPEHCRNYLS 664
+ + Y+
Sbjct: 314 AAVRLWGHVTIAERYVE 330
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 61.0 bits (147), Expect = 2e-09
Identities = 95/615 (15%), Positives = 176/615 (28%), Gaps = 183/615 (29%)
Query: 36 ETKQKEGQLFSPTKYFVEEVIN-SFDESDLHRTWVK-VIATRNTRERSNRLENMCWRIWH 93
+KQ+E + FVEEV+ ++ ++ I T R+ S M R++
Sbjct: 72 LSKQEEM-----VQKFVEEVLRINYK-------FLMSPIKTEQ-RQPS-----MMTRMYI 113
Query: 94 LARKKKQIAWEDAQRLAKRRLEREQGRNDAADDLSELS-------EGEKEKGDSINASES 146
R + + D Q AK + R Q L EL +G G + A +
Sbjct: 114 EQRDR---LYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV 170
Query: 147 LKEIPRI-NSDMQI-W-------SEDD--KSSRNLYIVLISMHGLVRGDNMEIGRDSDTG 195
D +I W S + + + L I + R D+
Sbjct: 171 CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLL-YQIDPNWTSRSDHSS--NIKLRI 227
Query: 196 GQVKYVVELARALANTEGVYRVDLLT-RQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYI 254
++ EL R L + Y LL + + + +++ LSC
Sbjct: 228 HSIQA--ELRRLLKSKP--YENCLLVLLNVQNAKAWNAFN-----LSC------------ 266
Query: 255 IRIPCGARDKYIA-------------KESLWPYIHEFVDGALNHIVNMARA--------- 292
+I R K + + V L ++
Sbjct: 267 -KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT 325
Query: 293 -------IGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNV--PMVLTGHSLGRNKFE 343
I E + G TW H + + + +LNV P R F+
Sbjct: 326 NPRRLSIIAESIRDGLATWDNWKHVNCDKLTTI---IESSLNVLEPAEY------RKMFD 376
Query: 344 QLLKQGRLPKDINASYKIMRRI----EAEELGLDASEMVVTS--TRQEIEMQWGLYDG-F 396
+L P + ++ I ++ + +++ S +Q E +
Sbjct: 377 RL---SVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYL 433
Query: 397 DLK--------LERKL--RVRRQRGVSCFGRFMPRMVVIPPGMD---FSYVT---TQDTM 440
+LK L R + + +IPP +D +S++
Sbjct: 434 ELKVKLENEYALHRSIVDHYNIPKTFDSDD-------LIPPYLDQYFYSHIGHHLKNIEH 486
Query: 441 GGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFG 500
L ++ D RF + A + N LK +
Sbjct: 487 PERMTLFRMVFLD---------------FRFLEQKIRHDSTAWNASGSILNTLQQLKFY- 530
Query: 501 ECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVP 560
+ I D ++ +L + K + ++ S
Sbjct: 531 -----------------KPYICDNDPKYERLVNAILDFLPKIE--------ENLICSKYT 565
Query: 561 DIYRLA--AKTKGVF 573
D+ R+A A+ + +F
Sbjct: 566 DLLRIALMAEDEAIF 580
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.1 bits (142), Expect = 7e-09
Identities = 92/623 (14%), Positives = 177/623 (28%), Gaps = 188/623 (30%)
Query: 191 DSDTGGQVKY-----VVELARALANTEGVYRV-DLLTRQIASPEVDSSYGEPNEMLSCPS 244
D +TG + +Y + A + V D+ ++ E+D + +
Sbjct: 8 DFETG-EHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVS---- 62
Query: 245 DGTGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVN---MARAIGEQVNGGK 301
G + ++ + + + +FV+ L +N + I +
Sbjct: 63 ------GTLRLFWTLLSKQEEMVQ--------KFVEEVLR--INYKFLMSPIKTEQRQ-- 104
Query: 302 PTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNK-FEQL---LKQGR------- 350
P+ ++ D N V +++ R + + +L L + R
Sbjct: 105 PSMMTRMYIEQRDR---------LYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLI 155
Query: 351 ----------LPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKL 400
+ D+ SYK+ +++ + L+ S +EM L D
Sbjct: 156 DGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKN--CNSPETVLEMLQKLLYQIDPNW 213
Query: 401 ERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRN 460
D S +L+ L+ +++ N
Sbjct: 214 T-------------------------SRSDHSSNIKLRIHSIQAELRRLL---KSKPYEN 245
Query: 461 ----LPPMWS-EVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-- 513
L + + + F IL +R K VT L A + +MTL
Sbjct: 246 CLLVLLNVQNAKAWNAFN--LSCKILLTTR---FKQVTDFLSAATTTHISLDHHSMTLTP 300
Query: 514 ---------ILGNRDDIEDMSNSSSVVLTTVLKLI--------DKYDLYGQVAYPKHHKQ 556
L R +D+ L +I +D + V K
Sbjct: 301 DEVKSLLLKYLDCR--PQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTI 358
Query: 557 SDV------PDIYR-----LAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPV 605
+ P YR L+ I P ++ L++I +
Sbjct: 359 IESSLNVLEPAEYRKMFDRLSVFPPSAHI-PTIL----LSLIWF--------DVIKSDVM 405
Query: 606 DILKALNNGLLVDPHDQN---AIADALLKLLADKNMWSECRKNGLKNIHR---------- 652
++ L+ LV+ + +I L+L + +HR
Sbjct: 406 VVVNKLHKYSLVEKQPKESTISIPSIYLELK--------VKLENEYALHRSIVDHYNIPK 457
Query: 653 -FSW----PEHCRNYL-SHVEHSRNRHPNSHLEIMTIPGEPLSDSLRDVEDFSLRFSMEG 706
F P + Y SH+ H HL+ + P R V RF +E
Sbjct: 458 TFDSDDLIPPYLDQYFYSHIGH--------HLKNIEHPER--MTLFRMVF-LDFRF-LEQ 505
Query: 707 DFKLNAELDAVTRQKNLIEAITQ 729
K+ + A +++ + Q
Sbjct: 506 --KIRHDSTAWNASGSILNTLQQ 526
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.9 bits (118), Expect = 5e-06
Identities = 65/444 (14%), Positives = 124/444 (27%), Gaps = 115/444 (25%)
Query: 309 HGHYAD--AGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIE 366
H H+ D GE L+V FE KD+ K + +
Sbjct: 3 HHHHMDFETGEHQYQYKDILSV-------------FEDAFVDNFDCKDVQDMPKSI--LS 47
Query: 367 AEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIP 426
EE+ ++++ G F L +++ V +F+ V+
Sbjct: 48 KEEI----DHIIMSKDAVS-----GTLRLFWT-----LLSKQEEMVQ---KFVEE--VLR 88
Query: 427 PGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRP 486
F L S I ++ Q + R + + +SR
Sbjct: 89 INYKF--------------LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRL 134
Query: 487 DPKKNVTTLLKA--------------FGE-------CQPLRELANMT-----LILGNRDD 520
P + L G+ C + M L L N +
Sbjct: 135 QPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNS 194
Query: 521 IED-MSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFI----- 574
E + ++ + D + H Q+++ + + + +
Sbjct: 195 PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQ 254
Query: 575 NPALVEPFGL--TIIEAAAYGLPVVATKNGGPVDILKALNNG-LLVDPHDQNAIADALLK 631
N F L I+ + T+ D L A + +D H D +
Sbjct: 255 NAKAWNAFNLSCKIL---------LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS 305
Query: 632 LLADKNMWSECRKNGL----KNIHRFSWP-------EHCRNYLSHVEHSRNRHPNSHLEI 680
LL + +CR L + P E R+ L+ ++ ++ + + I
Sbjct: 306 LLLK---YLDCRPQDLPREVLTTN----PRRLSIIAESIRDGLATWDNWKHVNCDKLTTI 358
Query: 681 MTIPGEPLS-DSLRDV-EDFSLRF 702
+ L R + + S+ F
Sbjct: 359 IESSLNVLEPAEYRKMFDRLSV-F 381
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Length = 200 | Back alignment and structure |
|---|
Score = 53.3 bits (129), Expect = 4e-08
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 572 VFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVD-ILKALNNGLLVDPHDQNAIADALL 630
I P+ EPFGL +EA G +A+ GG D I G+LV D +A+A+L
Sbjct: 118 FVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE--TGILVKAGDPGELANAIL 175
Query: 631 KLLA-DKNMWSECRKNGLKNIHRFSW 655
K L ++ S+ R+N K S+
Sbjct: 176 KALELSRSDLSKFRENCKK--RAMSF 199
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 | Back alignment and structure |
|---|
Score = 54.5 bits (130), Expect = 1e-07
Identities = 43/317 (13%), Positives = 96/317 (30%), Gaps = 37/317 (11%)
Query: 369 ELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPG 428
+ LD + + R E + + G D+ +E L R + ++ P
Sbjct: 326 DFDLDNTLYFFIAGRYEYKNK-----GADMFIE-ALARLNYRLKVSGSKKTVVAFIVMPA 379
Query: 429 MDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILA-----L 483
+ S+ T + + G ++++L + ++ +R+ N + L
Sbjct: 380 KNNSF--TVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELL 437
Query: 484 SRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYD 543
D +L L + ++ D I + + V D
Sbjct: 438 KSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNK-------IRQVQLFNSPSD 490
Query: 544 LYGQVAYPKHHKQSD--VPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKN 601
+ +P+ ++ + Y + + + P+ EP+G T E G+P + T
Sbjct: 491 RVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNV 550
Query: 602 GGPVDILKAL--------NNGLLVDPHDQN------AIADALLKLLA-DKNMWSECRKNG 646
G ++ L +VD + + D + + + + R
Sbjct: 551 SGFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNAT 610
Query: 647 LKNIHRFSWPEHCRNYL 663
W Y+
Sbjct: 611 EALSDLLDWKRMGLEYV 627
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} Length = 289 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 5e-05
Identities = 22/204 (10%), Positives = 59/204 (28%), Gaps = 24/204 (11%)
Query: 763 TTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSG 822
+ ++ K + VTGSS+ ++ + R I + G
Sbjct: 45 DIYELEDYLEQKSKDGE-------LIIGWVTGSSIESILDKMGRGKFRYFP-HFIASDLG 96
Query: 823 SELYFPWRD--MVADGDYEAHVEYRWPGENVRSVVPRV---------ARAEDGAEDDIVG 871
+E+ + D + + + + E V +V ++ + + G
Sbjct: 97 TEITYFSEHNFGQQDNKWNSRINEGFSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHN 156
Query: 872 FVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQA 931
F E + R + ++ +P + +
Sbjct: 157 FYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSYD-VDFIPIGTGKNEI 215
Query: 932 LRYLSIRWGIDLSKMVVFVGEKGD 955
+ ++ ++ ++ + + F GD
Sbjct: 216 VTFMLEKYNLNTERAIAF----GD 235
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Length = 485 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 2e-04
Identities = 24/119 (20%), Positives = 49/119 (41%), Gaps = 19/119 (15%)
Query: 572 VFINPALVEPFGLTIIEAAAYG-LPVV-AT-------KNGGPVDILKALNNGLLVDPHDQ 622
V + P+ EP GLT + YG LP+V T + ++ + +G + + +
Sbjct: 369 VILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNA 428
Query: 623 NAIADAL---LKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLS-----HVEHSRNRH 673
++ A+ L + ++W ++ + FSW ++Y +EH + H
Sbjct: 429 WSLLRAIRRAFVLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYRELYYRLKLEHHHHHH 485
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Length = 485 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 6e-04
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 18/106 (16%)
Query: 572 VFINPALVEPFGLTIIEAAAYG-LPVV-ATKNGGPVDILKALN---------NGLLVDPH 620
I P+ EP GLT + A YG +PVV T GG D + N G+ P
Sbjct: 368 AIIIPSRFEPCGLTQLYALRYGCIPVVART--GGLADTVIDANHAALASKAATGVQFSPV 425
Query: 621 DQNAIADAL---LKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYL 663
+ + A+ ++ D +W++ +K G+K SW + Y
Sbjct: 426 TLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYA 469
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} PDB: 2bis_A* 3l01_A* Length = 439 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 7e-04
Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 12/98 (12%)
Query: 572 VFINPALVEPFGLTIIEAAAYG-LPVV-ATKNGGPVD-ILKALNNGLLVDPHDQNAIADA 628
I P+ EPFGL +EA G +P+ A GG D I G+LV D +A+A
Sbjct: 333 FVIIPSYFEPFGLVALEAMCLGAIPIASAV--GGLRDIITNE--TGILVKAGDPGELANA 388
Query: 629 L---LKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYL 663
+ L+L FSW + Y+
Sbjct: 389 ILKALELSRSDLSKFRENCKK--RAMSFSWEKSAERYV 424
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1024 | ||||
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 3e-25 | |
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 1e-23 | |
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 8e-19 | |
| d2iw1a1 | 370 | c.87.1.8 (A:2-371) Lipopolysaccharide core biosynt | 3e-10 | |
| d2bfwa1 | 196 | c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Py | 7e-06 |
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 107 bits (267), Expect = 3e-25
Identities = 91/485 (18%), Positives = 158/485 (32%), Gaps = 68/485 (14%)
Query: 194 TGGQVKYVVELARALANTEGVYRVDLLTR--QIASPEVDSSYGEPNEMLSCPSDGTGSCG 251
GG + + ++ ALA+ G + V + T E E +
Sbjct: 15 VGGLAEALTAISEALAS-LG-HEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGN 72
Query: 252 AYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGH 311
I RI G D +++ P + A+ + + + P V+H H
Sbjct: 73 LRIYRIGGGLLD---SEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEP--LPDVVHFH 127
Query: 312 YADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELG 371
A + +P V T H L ++K + + I+ E G
Sbjct: 128 DWHTVFAGALIKKYFKIPAVFTIHRLNKSKLPAF----YFHEAGLSELAPYPDIDPEHTG 183
Query: 372 LDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDF 431
+++V T +R + +WG + F+ ++ + G+D
Sbjct: 184 GYIADIVTTVSRGYLIDEWGFFRNFE----------------------GKITYVFNGIDC 221
Query: 432 SYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKN 491
S+ G + K S + +F + + +K
Sbjct: 222 SFWNESYLTGSRDERK-----------------KSLLSKFGMDEGVTFMFIGRFDRGQKG 264
Query: 492 VTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYP 551
V LLKA +E M I+ + D E + +G V
Sbjct: 265 VDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGW-----------ARSLEEKHGNVKVI 313
Query: 552 KHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKAL 611
+ + I P+ EPFGL +EA G +A+ GG DI+
Sbjct: 314 TEMLSREFVRELYGSVD---FVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN- 369
Query: 612 NNGLLVDPHDQNAIADALLKLLA-DKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSR 670
G+LV D +A+A+LK L ++ S+ R+N K FSW + Y+ S
Sbjct: 370 ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSI 429
Query: 671 NRHPN 675
+R +
Sbjct: 430 DRAFD 434
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 103 bits (256), Expect = 1e-23
Identities = 88/507 (17%), Positives = 155/507 (30%), Gaps = 88/507 (17%)
Query: 194 TGGQVKYVVELARALANTEGVYRVDLLT-----------RQIASPEVDSSYGEPNEMLSC 242
TGG V L AL GV R L + E GE ++L
Sbjct: 16 TGGLADVVGALPIALEA-HGV-RTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEV 73
Query: 243 PSDGTGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMA---RAIGEQVNG 299
+ I+ P + S PY+ + ++ A A G
Sbjct: 74 QHER---LDLLILDAP------AYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAG 124
Query: 300 GKPTW-PYVIHGHYADAGEVAAHL--SGALNVPMVLTGHS------LGRNKFEQLLKQGR 350
P W P ++H H A ++ + +P +LT H+ G N F +L
Sbjct: 125 VLPGWRPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAH 184
Query: 351 -LPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409
+ Y + ++ A V S +EI L F + LE + R
Sbjct: 185 AFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEI-----LTAEFGMGLEGVIGSR-- 237
Query: 410 RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVM 469
+ I G+D + + +R +K+
Sbjct: 238 ---------AHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKK-----AVAEH 283
Query: 470 RFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSS 529
+ P +SR +K + + +A E + + ++ +E +
Sbjct: 284 FRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEI--VSLGGRLVVLGAGDVALEGALLA-- 339
Query: 530 VVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEA 589
+G+V + + + I P+ EP GLT + A
Sbjct: 340 ----------AASRHHGRVGVAIGYNEPLSHLMQAGCD----AIIIPSRFEPCGLTQLYA 385
Query: 590 AAYGLPVVATKNGGPVDILKALN---------NGLLVDPHDQNAIADAL---LKLLADKN 637
YG V + GG D + N G+ P + + A+ ++ D
Sbjct: 386 LRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPK 445
Query: 638 MWSECRKNGLKNIHRFSWPEHCRNYLS 664
+W++ +K G+K SW + Y +
Sbjct: 446 LWTQMQKLGMK--SDVSWEKSAGLYAA 470
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 88.4 bits (218), Expect = 8e-19
Identities = 40/281 (14%), Positives = 88/281 (31%), Gaps = 37/281 (13%)
Query: 403 KLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLP 462
++ R + + +G+ R V P G++ + Q L
Sbjct: 202 RVTTRSAKSHTAWGKAF-RTEVYPIGIEPKEIAKQAA------------GPLPPKLAQLK 248
Query: 463 PMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLIL-----GN 517
+ I ++ R D K + A+ + + +
Sbjct: 249 AEL---------KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTS 299
Query: 518 RDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPA 577
R D++ + + ++ KY G ++ D + ++ + V +
Sbjct: 300 RGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYS-DVGLVTP 358
Query: 578 LVEPFGLTIIEAAAYGLP-----VVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKL 632
L + L E A P +V ++ G + L + L+V+P+D++ +A AL +
Sbjct: 359 LRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL---TSALIVNPYDRDEVAAALDRA 415
Query: 633 LA-DKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNR 672
L L I + ++S ++ R
Sbjct: 416 LTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPR 456
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Length = 370 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Score = 60.7 bits (145), Expect = 3e-10
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 592 YGLPVVATKNGGPVDILKALNNGLLV-DPHDQNAIADALLKLLADKNMWSECRKNGLKNI 650
GLPV+ T G + N G ++ +P Q + + L K L + +N
Sbjct: 292 AGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYA 351
Query: 651 HRF---SWPEHCRNYLS 664
S PE + ++
Sbjct: 352 DTQDLYSLPEKAADIIT 368
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 196 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 45.6 bits (106), Expect = 7e-06
Identities = 45/218 (20%), Positives = 73/218 (33%), Gaps = 26/218 (11%)
Query: 441 GGDTDL--KSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPD-PKKNVTTLLK 497
G D +S + R + K++L + F T + + R D +K V LLK
Sbjct: 1 GIDCSFWNESYLTGSRDERKKSL-------LSKFGMDEGVTFMFIGRFDRGQKGVDVLLK 53
Query: 498 AFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQS 557
A +E M I+ + D E + S+ + L + +
Sbjct: 54 AIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVD 113
Query: 558 DVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLV 617
V G +A+ GG DI+ G+LV
Sbjct: 114 FVIIPSYFEPFGLVALEAMC--------------LGAIPIASAVGGLRDIITN-ETGILV 158
Query: 618 DPHDQNAIADALLKLLA-DKNMWSECRKNGLKNIHRFS 654
D +A+A+LK L ++ S+ R+N K FS
Sbjct: 159 KAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFS 196
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1024 | |||
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 100.0 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 100.0 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 100.0 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 100.0 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.97 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.97 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.97 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.95 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.95 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.95 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.94 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.91 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.9 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 99.9 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.88 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 99.88 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 99.83 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 99.51 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 99.48 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.41 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 99.39 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.35 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 99.12 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 98.94 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 98.91 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.88 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 98.86 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.82 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 98.79 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.58 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 98.5 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 98.46 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 98.46 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 98.42 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 98.38 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 98.31 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.25 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 98.24 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 97.96 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 97.77 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 97.75 | |
| d2b5dx1 | 114 | Alpha-amylase AmyC {Thermotoga maritima [TaxId: 23 | 96.98 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 96.82 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 96.26 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 96.08 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 95.54 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 95.35 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 94.98 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 94.67 | |
| d1ufaa1 | 105 | Hypothetical protein TT1467, domain 2 {Thermus the | 94.49 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 93.31 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 93.02 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 82.8 |
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=0 Score=340.05 Aligned_cols=422 Identities=22% Similarity=0.307 Sum_probs=290.4
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCC-----CCCCCCCCCCCC
Q ss_conf 189999314543457777799898880789999999999807991389998167789987766-----698753357999
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSS-----YGEPNEMLSCPS 244 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~-----y~~~~e~l~~~~ 244 (1024)
||||+++.. || |..+||+++++..|+++|+++| |+|+|+|+.......... ++...... .
T Consensus 1 MkIl~~~~~---------~p-P~~~GG~~~~~~~La~~L~~~G--h~V~Vvtp~~~~~~~~~~~~~~~~~~~~~~~---~ 65 (437)
T d2bisa1 1 MKVLLLGFE---------FL-PVKVGGLAEALTAISEALASLG--HEVLVFTPSHGRFQGEEIGKIRVFGEEVQVK---V 65 (437)
T ss_dssp CEEEEECSC---------CT-TCCSSSHHHHHHHHHHHHHHTT--CEEEEEEECTTSSCCEEEEEEECSSSEEEEE---E
T ss_pred CEEEEECCC---------CC-CCCCCCHHHHHHHHHHHHHHCC--CEEEEEECCCCCCCHHHCCCEEECCCCCCEE---E
T ss_conf 987998774---------58-8455879999999999999769--9899990589865544415402215442011---2
Q ss_pred CCCCCCCEEEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf 99997880999804899877644346-77314899999999999999998754149999963499976987479999998
Q 001705 245 DGTGSCGAYIIRIPCGARDKYIAKES-LWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLS 323 (1024)
Q Consensus 245 ~~~~~~gv~i~rip~~~~~~~~~k~~-lw~~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~ 323 (1024)
......++.++++..+ ++.... .++...................+...+... ..||+||+|++..++++.+++
T Consensus 66 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~pDiIh~~~~~~~~~~~~~~ 139 (437)
T d2bisa1 66 SYEERGNLRIYRIGGG----LLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREE--PLPDVVHFHDWHTVFAGALIK 139 (437)
T ss_dssp EEEEETTEEEEEEESS----GGGCSCTTCSHHHHHHHHHHHHHHHHHHHHHHHTTSS--CCCSEEEEETGGGHHHHHHHH
T ss_pred EEECCCCEEEEECCCC----CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCEEEECCHHHHHHHHHHH
T ss_conf 3322588179961754----3454112553114689999998999999899998408--999789989704666765430
Q ss_pred CCCCCCEEEEECCCCHHHHHHH-HHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCHHHHH
Q ss_conf 0299979999579960036998-731999700336899999899999731117989927989999997002686267899
Q 001705 324 GALNVPMVLTGHSLGRNKFEQL-LKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLER 402 (1024)
Q Consensus 324 ~~~~ipiV~t~H~l~~~~~~~l-~~~g~~~~~i~~~y~~~~~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~l~~~f~~~~~~ 402 (1024)
+..++|++++.|++....+... ........... ...+..+......+|.+++.+.....+.+..+..+.
T Consensus 140 ~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~----- 209 (437)
T d2bisa1 140 KYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAP-----YPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFE----- 209 (437)
T ss_dssp HHHCCCEEEEESSCCCCCEEHHHHHHTTCGGGCC-----SSEECHHHHHHHHSSEEEESCHHHHHHTHHHHGGGT-----
T ss_pred CCCCCCEEEEEEECCCCCCCHHHHHHCCCHHHHH-----HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC-----
T ss_conf 1346762589962144555123321012013456-----778899988887652211110245666666513456-----
Q ss_pred HHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEE
Q ss_conf 99985404743458889968995999989996446898998311001257654555799830588753207999958999
Q 001705 403 KLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILA 482 (1024)
Q Consensus 403 ~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~ 482 (1024)
.++.+||||+|.+.|.+.... ...+.........+...+++.|++
T Consensus 210 -----------------~ki~vi~~g~d~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~i~~ 254 (437)
T d2bisa1 210 -----------------GKITYVFNGIDCSFWNESYLT------------------GSRDERKKSLLSKFGMDEGVTFMF 254 (437)
T ss_dssp -----------------TTEEECCCCCCTTTSCGGGCC------------------SCHHHHHHHHHHHTTCCSCEEEEE
T ss_pred -----------------CCEEEEECCCCCCCCCCCCCC------------------HHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf -----------------751897046544343322220------------------105888876545540267866987
Q ss_pred EECCC-CCCCHHHHHHHHHHCCCCCCCCCEEE-EEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHH
Q ss_conf 83899-87899999999941415579983999-99159993000133158999999999871999977839999989799
Q 001705 483 LSRPD-PKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVP 560 (1024)
Q Consensus 483 vgRld-~~Kgi~~ll~A~~~l~~l~~~~~l~L-IiG~~~~~~~l~~~~~~~~~~i~~li~~~~l~~~V~~~g~~~~~el~ 560 (1024)
+||+. ++||++.+++|+..+......+++.| ++|.++.. ....+..+... ....+.+.+.++.+++.
T Consensus 255 ~G~~~~~~Kg~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~~---------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 323 (437)
T d2bisa1 255 IGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPE---------LEGWARSLEEK--HGNVKVITEMLSREFVR 323 (437)
T ss_dssp ESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHH---------HHHHHHHHHHT--CTTEEEECSCCCHHHHH
T ss_pred EECCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCC---------CCCCHHHHCCC--CCCCEECCCCCCHHHHH
T ss_conf 30356651258999864102332333332114531022333---------32100221023--21000023457688899
Q ss_pred HHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHH-CHHHH
Q ss_conf 99997231893999238989888999999984996998188872111304985899399999999999999973-99999
Q 001705 561 DIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLA-DKNMW 639 (1024)
Q Consensus 561 ~ly~~A~~~~Dv~v~ps~~Egfgl~llEAmA~G~PVIat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~-d~~~~ 639 (1024)
.+|+.| |++++||..|+||++++||||||+|||+++.||..|++.+ .+|+++++.|+++++++|.++++ +++.+
T Consensus 324 ~~~~~a----di~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g~~~e~i~~-~~G~~~~~~d~~~la~~i~~ll~~~~~~~ 398 (437)
T d2bisa1 324 ELYGSV----DFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILKALELSRSDL 398 (437)
T ss_dssp HHHTTC----SEEEECCSCCSSCHHHHHHHTTTCEEEEESCTTHHHHCCT-TTCEEECTTCHHHHHHHHHHHHTTTTSCT
T ss_pred HHHHHH----CCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHEEC-CCEEEECCCCHHHHHHHHHHHHHCCHHHH
T ss_conf 987642----2354446555642689999987998999389980773778-95899779999999999999983799999
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 9999999999960999999999999999836149
Q 001705 640 SECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNRH 673 (1024)
Q Consensus 640 ~~~~~~a~~~~~~fsw~~~a~~~l~~l~~~~~~~ 673 (1024)
+++++++++.+++|||++++++|+++|++++.+.
T Consensus 399 ~~~~~~~~~~~~~~s~~~~a~~~~~iY~~~i~r~ 432 (437)
T d2bisa1 399 SKFRENCKKRAMSFSWEKSAERYVKAYTGSIDRA 432 (437)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHHTCSCCB
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999996999999999999999999867
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=0 Score=345.81 Aligned_cols=441 Identities=18% Similarity=0.196 Sum_probs=273.0
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC-------CCCC----CCCCCCCC
Q ss_conf 189999314543457777799898880789999999999807991389998167789-------9877----66698753
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIAS-------PEVD----SSYGEPNE 238 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~-------p~~~----~~y~~~~e 238 (1024)
|||+||+++++ | ...+||++.+|.+|+++|+++| |+|+|+|+.... +-.. ..++...+
T Consensus 1 M~i~~v~~e~~--------P-~~~~GGl~~vv~~La~~L~~~G--h~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (477)
T d1rzua_ 1 MNVLSVSSEIY--------P-LIKTGGLADVVGALPIALEAHG--VRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKAD 69 (477)
T ss_dssp CEEEEECSCBT--------T-TBCSSHHHHHHHHHHHHHHTTT--CEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEE
T ss_pred CEEEEEEEEEE--------C-CCCCCCHHHHHHHHHHHHHHCC--CEEEEEECCCCCHHHHCCCCEEEEEEECCCCCEEE
T ss_conf 98999977220--------6-3326768999999999999769--96999966985344652566589997146785478
Q ss_pred CCCCCCCCCCCCCEEEEEECCC-----CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
Q ss_conf 3579999999788099980489-----98776443467731489999999999999999875414999996349997698
Q 001705 239 MLSCPSDGTGSCGAYIIRIPCG-----ARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYA 313 (1024)
Q Consensus 239 ~l~~~~~~~~~~gv~i~rip~~-----~~~~~~~k~~lw~~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~ 313 (1024)
+.. ....|+.++.+... +...+... ..-.+...+.... .+.....+.+...+.. ++|||||+|+|
T Consensus 70 ~~~-----~~~~~v~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~pDIvH~h~~ 139 (477)
T d1rzua_ 70 LLE-----VQHERLDLLILDAPAYYERSGGPYLGQ-TGKDYPDNWKRFA-ALSLAAARIGAGVLPG---WRPDMVHAHDW 139 (477)
T ss_dssp EEE-----EEETTEEEEEEECHHHHCSSSCSSBCT-TSSBCTTHHHHHH-HHHHHHHHHHTTCSSS---CCCSEEEEEHH
T ss_pred EEE-----EEECCEEEEEECCHHHCCCCCCCCCCC-CCCCCCCCHHHHH-HHHHHHHHHHHHCCCC---CCCCEEEECCH
T ss_conf 999-----998991599955824304678735576-6656652188999-9998877665302568---88887993360
Q ss_pred CHHHHHHHHH--CCCCCCEEEEECCCCHHHH--HHHH-HCCCCCCCHH-HHHHHHHHHHHHHHHHHCCCEEEECCHHHHH
Q ss_conf 7479999998--0299979999579960036--9987-3199970033-6899999899999731117989927989999
Q 001705 314 DAGEVAAHLS--GALNVPMVLTGHSLGRNKF--EQLL-KQGRLPKDIN-ASYKIMRRIEAEELGLDASEMVVTSTRQEIE 387 (1024)
Q Consensus 314 ~~~~~a~~l~--~~~~ipiV~t~H~l~~~~~--~~l~-~~g~~~~~i~-~~y~~~~~i~~e~~~l~~Ad~Vi~~S~~~~~ 387 (1024)
..++.+..+. +..++|+|+|.|++..... ..++ ..+....... ........+..++.....+|.++++|..+.+
T Consensus 140 ~~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~ 219 (477)
T d1rzua_ 140 QAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAE 219 (477)
T ss_dssp HHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 67788999998547898889998324423467888998862114440654434320568999887764442131199999
Q ss_pred HHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CHH
Q ss_conf 9970026862678999998540474345888996899599998999644689899831100125765455579983-058
Q 001705 388 MQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPP-MWS 466 (1024)
Q Consensus 388 ~~~~l~~~f~~~~~~~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~ 466 (1024)
+....+.++ ..+.+.+. ...++.+||||+|...|.|.... .+...... ........ ...
T Consensus 220 ~~~~~~~~~--~~~~~~~~-----------~~~~~~vi~ngv~~~~~~p~~~~----~i~~~~~~---~~~~~~~~~~~~ 279 (477)
T d1rzua_ 220 EILTAEFGM--GLEGVIGS-----------RAHVLHGIVNGIDADVWNPATDH----LIHDNYSA---ANLKNRALNKKA 279 (477)
T ss_dssp HTTSHHHHT--TCHHHHHT-----------TGGGEEECCCCBCTTTSCTTTCT----TSSSCCBT---TBCTTHHHHHHH
T ss_pred HHHHHHCCC--CHHHHHHH-----------CCCCEEEEECCCCHHHCCCCCCC----CCCCCCHH---HHHHHHHHHHHH
T ss_conf 999875475--36656665-----------15647999789340120566453----33333104---567776663899
Q ss_pred HHHHHHC-CCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 8753207-999958999838998789999999994141557998399999159993000133158999999999871999
Q 001705 467 EVMRFFT-NPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLY 545 (1024)
Q Consensus 467 ~~~~~~~-~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIiG~~~~~~~l~~~~~~~~~~i~~li~~~~l~ 545 (1024)
...+... .++.++|+++||+++.||++.|++|+.++. +..+++ +++|.|+. .....+..+... +.
T Consensus 280 ~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~--~~~~~l-~~~G~G~~---------~~~~~~~~~~~~--~~ 345 (477)
T d1rzua_ 280 VAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIV--SLGGRL-VVLGAGDV---------ALEGALLAAASR--HH 345 (477)
T ss_dssp HHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHH--HTTCEE-EEEECBCH---------HHHHHHHHHHHH--TT
T ss_pred HHHHCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHH--HHCCEE-EEEECCCC---------HHHHHHHHHHHH--CC
T ss_conf 88741446678638999850021588379999999878--659839-99936774---------577899998763--58
Q ss_pred CCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHCCCC---------CEEE
Q ss_conf 9778399999897999999723189399923898988899999998499699818887211130498---------5899
Q 001705 546 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALN---------NGLL 616 (1024)
Q Consensus 546 ~~V~~~g~~~~~el~~ly~~A~~~~Dv~v~ps~~Egfgl~llEAmA~G~PVIat~~Gg~~eii~~~~---------~Gll 616 (1024)
++|.+.+..+.+++..+|+.| |++|+||.+|+||++++||||||+|||+|+.||++|+|.++. +|++
T Consensus 346 ~~v~~~~~~~~~~~~~~~~~a----D~~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l 421 (477)
T d1rzua_ 346 GRVGVAIGYNEPLSHLMQAGC----DAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQ 421 (477)
T ss_dssp TTEEEEESCCHHHHHHHHHHC----SEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEE
T ss_pred CEEEEECCCCHHHHHHHHHHC----CCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCEEECCCCCCCCCCCCCEEE
T ss_conf 727897154705799999838----5134886535788899999983998999079997405524875533467874489
Q ss_pred ECCCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 399999999999999973---9999999999999999609999999999999998361
Q 001705 617 VDPHDQNAIADALLKLLA---DKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRN 671 (1024)
Q Consensus 617 v~p~d~~~la~aI~~ll~---d~~~~~~~~~~a~~~~~~fsw~~~a~~~l~~l~~~~~ 671 (1024)
|+|.|+++++++|.++++ ++++|+++++++++ ++|||+.++++|+++|+++++
T Consensus 422 ~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~a~~--~~fsw~~~a~~~~~lY~~ll~ 477 (477)
T d1rzua_ 422 FSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYSQLIS 477 (477)
T ss_dssp ESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHHHHTC
T ss_pred ECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH--HHCCHHHHHHHHHHHHHHHHC
T ss_conf 69999999999999998600799999999999998--518999999999999999849
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=7.7e-42 Score=292.04 Aligned_cols=365 Identities=16% Similarity=0.200 Sum_probs=247.8
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99993145434577777998988807899999999998079913899981677899877666987533579999999788
Q 001705 172 IVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCG 251 (1024)
Q Consensus 172 Il~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~g 251 (1024)
|+|+...+. | .||.++++.+|+++|+++| |+|+|+|+.... ....+
T Consensus 2 i~f~~~~y~-----------p-~GG~e~~~~~la~~L~~~G--~~V~v~~~~~~~--------------------~~~~~ 47 (370)
T d2iw1a1 2 VAFCLYKYF-----------P-FGGLQRDFMRIASTVAARG--HHVRVYTQSWEG--------------------DCPKA 47 (370)
T ss_dssp EEEECSEEC-----------T-TCHHHHHHHHHHHHHHHTT--CCEEEEESEECS--------------------CCCTT
T ss_pred EEEEECCCC-----------C-CCCHHHHHHHHHHHHHHCC--CEEEEEECCCCC--------------------CCCCC
T ss_conf 899914889-----------9-9989999999999999779--979999567877--------------------88886
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCEE
Q ss_conf 09998048998776443467731489999999999999999875414999996349997698747999999802999799
Q 001705 252 AYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMV 331 (1024)
Q Consensus 252 v~i~rip~~~~~~~~~k~~lw~~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipiV 331 (1024)
+.++++|......+ .....|..+....+ .. ..+|+||.+....+ ..+
T Consensus 48 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~-------~~-------~~~d~v~~~~~~~~-----------~~~- 94 (370)
T d2iw1a1 48 FELIQVPVKSHTNH-------GRNAEYYAWVQNHL-------KE-------HPADRVVGFNKMPG-----------LDV- 94 (370)
T ss_dssp CEEEECCCCCSSHH-------HHHHHHHHHHHHHH-------HH-------SCCSEEEESSCCTT-----------CSE-
T ss_pred EEEEECCCCCCCCC-------HHHHHHHHHHHHHH-------HH-------CCCCEEEECCCCCH-----------HHH-
T ss_conf 38998676554430-------11588999999999-------86-------16552531036723-----------789-
Q ss_pred EEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
Q ss_conf 99579960036998731999700336899999899999731117989927989999997002686267899999854047
Q 001705 332 LTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRG 411 (1024)
Q Consensus 332 ~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~~~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~l~~~f~~~~~~~l~~~~~~g 411 (1024)
+..++...... .....+... .....+.....+.........++.+++.+......+...+..
T Consensus 95 ~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 156 (370)
T d2iw1a1 95 YFAADVCYAEK-VAQEKGFLY-RLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQT---------------- 156 (370)
T ss_dssp EECCSCCHHHH-HHHHCCHHH-HTSHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHHHCC----------------
T ss_pred HHHHHCCCCEE-EEEECCCCC-CCCCHHCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCC----------------
T ss_conf 98762244104-663047420-004000006788999974215746998247999999986099----------------
Q ss_pred CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH-HHHHHHCCCCCCEEEEEECCCCCC
Q ss_conf 4345888996899599998999644689899831100125765455579983058-875320799995899983899878
Q 001705 412 VSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWS-EVMRFFTNPHKPTILALSRPDPKK 490 (1024)
Q Consensus 412 ~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~Il~vgRld~~K 490 (1024)
...++.++|||+|...+.+... +.... ....+...+++++|+++||+.+.|
T Consensus 157 ------~~~~i~vi~~gv~~~~~~~~~~----------------------~~~~~~~r~~~~~~~~~~~i~~~gr~~~~K 208 (370)
T d2iw1a1 157 ------EPERFQILPPGIYPDRKYSEQI----------------------PNSREIYRQKNGIKEQQNLLLQVGSDFGRK 208 (370)
T ss_dssp ------CGGGEEECCCCCCGGGSGGGSC----------------------TTHHHHHHHHTTCCTTCEEEEEECSCTTTT
T ss_pred ------CCCEEEEEEEECCCCCCCCCCC----------------------HHHHHHHHHCCCCCCCCEEEEEEECCCCCC
T ss_conf ------9642899974022221124676----------------------566666543048886636999985145542
Q ss_pred CHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCC
Q ss_conf 99999999941415579983999991599930001331589999999998719999778399999897999999723189
Q 001705 491 NVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTK 570 (1024)
Q Consensus 491 gi~~ll~A~~~l~~l~~~~~l~LIiG~~~~~~~l~~~~~~~~~~i~~li~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~ 570 (1024)
|++.+++|+..+.+......+ +++|+++.. ..+.+++++++...++.|+|+ .+++..+|+.|
T Consensus 209 g~~~li~a~~~l~~~~~~~~~-~ii~g~~~~-----------~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a---- 270 (370)
T d2iw1a1 209 GVDRSIEALASLPESLRHNTL-LFVVGQDKP-----------RKFEALAEKLGVRSNVHFFSG--RNDVSELMAAA---- 270 (370)
T ss_dssp THHHHHHHHHTSCHHHHHTEE-EEEESSSCC-----------HHHHHHHHHHTCGGGEEEESC--CSCHHHHHHHC----
T ss_pred CHHHHCCCCCCCCCCCCCCEE-EECCCCCCC-----------CCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCC----
T ss_conf 033320111233233221000-001122222-----------232222222222222222332--33444222333----
Q ss_pred CEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHCCCCCEEEE-CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
Q ss_conf 39992389898889999999849969981888721113049858993-99999999999999973999999999999999
Q 001705 571 GVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLV-DPHDQNAIADALLKLLADKNMWSECRKNGLKN 649 (1024)
Q Consensus 571 Dv~v~ps~~Egfgl~llEAmA~G~PVIat~~Gg~~eii~~~~~Gllv-~p~d~~~la~aI~~ll~d~~~~~~~~~~a~~~ 649 (1024)
|++|+||..|+||++++|||+||+|||+|+.||..|++.++.+|+++ +|.|+++++++|.++++|+++++++++++++.
T Consensus 271 dv~v~ps~~E~~~~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d~~~~~~~~~~ar~~ 350 (370)
T d2iw1a1 271 DLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHY 350 (370)
T ss_dssp SEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 34443222234331133214577039993899718885279836998699999999999999976999999999999999
Q ss_pred HHCCCHHHHHHHHHHHHH
Q ss_conf 960999999999999999
Q 001705 650 IHRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 650 ~~~fsw~~~a~~~l~~l~ 667 (1024)
++.|+|..+.+++.++|.
T Consensus 351 ~~~~~~~~~~~~~~~ii~ 368 (370)
T d2iw1a1 351 ADTQDLYSLPEKAADIIT 368 (370)
T ss_dssp HHHSCCSCHHHHHHHHHH
T ss_pred HHHHCHHHHHHHHHHHHH
T ss_conf 998285479999999984
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.1e-42 Score=293.86 Aligned_cols=417 Identities=16% Similarity=0.152 Sum_probs=288.2
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89999314543457777799898880789999999999807991389998167789987766698753357999999978
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
|++++|...- +...+.+..||.+..+..+ +.+.||+. +=......++ .++... ....
T Consensus 2 rlivvsnr~~-----~~~~~~~~~gGl~~al~~~---~~~~~g~W---vgw~g~~~~~-----~~~~~~-------~~~~ 58 (456)
T d1uqta_ 2 RLVVVSNRIA-----PPDEHAASAGGLAVGILGA---LKAAGGLW---FGWSGETGNE-----DQPLKK-------VKKG 58 (456)
T ss_dssp CEEEEEEECC-----CCC----CCCHHHHHHHHH---HHHHCEEE---EEEEEEESCC-----SSCCEE-------EEET
T ss_pred CEEEEECCCC-----CCCCCCCCCCCHHHHHHHH---HHHCCCEE---EECCCCCCCC-----CCHHHH-------HHCC
T ss_conf 7899979999-----7888778996189972999---95179789---9669988766-----423455-------5405
Q ss_pred CEEEEEECCCCC-----CCCCCCCCCCCCHHHH----------HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCH
Q ss_conf 809998048998-----7764434677314899----------9999999999999987541499999634999769874
Q 001705 251 GAYIIRIPCGAR-----DKYIAKESLWPYIHEF----------VDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADA 315 (1024)
Q Consensus 251 gv~i~rip~~~~-----~~~~~k~~lw~~~~~f----------~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~ 315 (1024)
+.....++..+. ..++++..+||.+|.+ .......++.+++.+.+.+..+ |+||+|++++
T Consensus 59 ~~~~~~v~l~~~~~~~~Y~gf~n~~LWpl~H~~~~~~~~~~~~~~~Y~~vN~~fA~~l~~~~~~~-----d~iwvhDyhl 133 (456)
T d1uqta_ 59 NITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLVQFQRPAWDGYLRVNALLADKLLPLLQDD-----DIIWIHDYHL 133 (456)
T ss_dssp TEEEEEEEECHHHHHHHTTTHHHHTHHHHHTTCGGGCCCCHHHHHHHHHHHHHHHHHHGGGCCTT-----CEEEEESGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC-----CEEEEECCCH
T ss_conf 85169956999999999987154426210157666544037888889999999999998725689-----8699954525
Q ss_pred HHHHHHHHCCC-CCCEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH---HHHHCCCEEEECCHHHHHHHHH
Q ss_conf 79999998029-9979999579960036998731999700336899999899999---7311179899279899999970
Q 001705 316 GEVAAHLSGAL-NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEE---LGLDASEMVVTSTRQEIEMQWG 391 (1024)
Q Consensus 316 ~~~a~~l~~~~-~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~~~i~~e~---~~l~~Ad~Vi~~S~~~~~~~~~ 391 (1024)
..++.++++.. +.+++++.|..++. +.+++.+++.+ ..+-.+|.|.+++..+++.
T Consensus 134 ~llp~~lR~~~~~~~i~~flH~pfP~------------------~~~fr~lp~~~~il~~ll~~d~igf~~~~~~~~--- 192 (456)
T d1uqta_ 134 LPFAHELRKRGVNNRIGFFLHIPFPT------------------PEIFNALPTYDTLLEQLCDYDLLGFQTENDRLA--- 192 (456)
T ss_dssp TTHHHHHHHTTCCSCEEEECCSCCCC------------------HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHH---
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCCC------------------HHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHH---
T ss_conf 55699999858998589996899998------------------577554850699997763226200358999999---
Q ss_pred CCCCCCHHHHHHHHHHHH--CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 026862678999998540--474345888996899599998999644689899831100125765455579983058875
Q 001705 392 LYDGFDLKLERKLRVRRQ--RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVM 469 (1024)
Q Consensus 392 l~~~f~~~~~~~l~~~~~--~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 469 (1024)
|...+.+.++.... .++...|+.. ++.++|+|||...|.+... .+.......+.
T Consensus 193 ----fl~~~~~ll~~~~~~~~~i~~~gr~v-~v~~~p~GID~~~~~~~~~-------------------~~~~~~~~~l~ 248 (456)
T d1uqta_ 193 ----FLDCLSNLTRVTTRSAKSHTAWGKAF-RTEVYPIGIEPKEIAKQAA-------------------GPLPPKLAQLK 248 (456)
T ss_dssp ----HHHHHHHHSCEEEETTTEEEETTEEE-EEEECCCCCCHHHHHHHHH-------------------SCCCHHHHHHH
T ss_pred ----HHHHHHHHHCCCCCCCCEEEECCCEE-EEEEECCCCCCHHHHHHCC-------------------CHHHHHHHHHH
T ss_conf ----99999997386112687299568155-3012067656266543114-------------------07799999977
Q ss_pred HHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCC----CEEEEE-ECC--CCC---CCCCCCCHHHHHHHHHHH
Q ss_conf 3207999958999838998789999999994141557998----399999-159--993---000133158999999999
Q 001705 470 RFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELA----NMTLIL-GNR--DDI---EDMSNSSSVVLTTVLKLI 539 (1024)
Q Consensus 470 ~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~----~l~LIi-G~~--~~~---~~l~~~~~~~~~~i~~li 539 (1024)
.. ..++++|+++||+++.||++.+++||+++. ..+| ++.+++ +.+ .+. .++..+......+++..+
T Consensus 249 ~~--~~~~~~il~V~Rld~~KGi~~~l~A~~~~l--~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~ 324 (456)
T d1uqta_ 249 AE--LKNVQNIFSVERLDYSKGLPERFLAYEALL--EKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKY 324 (456)
T ss_dssp HH--TTTCEEEEEECCBCGGGCHHHHHHHHHHHH--HHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HH--CCCCEEEEEECCCCHHHCHHHHHHHHHHHH--HHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 75--289859999378743206589999999998--75843146189999748753456889999999999999987652
Q ss_pred HHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCC-----EEECCCCCCHHHHCCCCCE
Q ss_conf 87199997783999998979999997231893999238989888999999984996-----9981888721113049858
Q 001705 540 DKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLP-----VVATKNGGPVDILKALNNG 614 (1024)
Q Consensus 540 ~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~Dv~v~ps~~Egfgl~llEAmA~G~P-----VIat~~Gg~~eii~~~~~G 614 (1024)
...++.+.+.+.+.++++++.++|+.| |++++||++||||++++||||||+| +|+|+.+|+.+.+. +|
T Consensus 325 ~~~~~~~~v~~~~~~~~~~l~a~~~~A----dv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l~---~g 397 (456)
T d1uqta_ 325 GQLGWTPLYYLNQHFDRKLLMKIFRYS----DVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SA 397 (456)
T ss_dssp CBTTBCSEEEECSCCCHHHHHHHHHHC----SEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT---TS
T ss_pred CCCCCCCEEECCCCCCHHHHHHHHHHH----CEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCHHHHC---CE
T ss_conf 127987502115876788876777530----54525876578883999999908988897589728978778859---76
Q ss_pred EEECCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 993999999999999999739-999999999999999609999999999999998361
Q 001705 615 LLVDPHDQNAIADALLKLLAD-KNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRN 671 (1024)
Q Consensus 615 llv~p~d~~~la~aI~~ll~d-~~~~~~~~~~a~~~~~~fsw~~~a~~~l~~l~~~~~ 671 (1024)
++|+|+|++++|++|.++|++ +++++++.+++++.+.+|++..|++.|++.++++..
T Consensus 398 ~lVnP~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W~~~fl~~l~~~~~ 455 (456)
T d1uqta_ 398 LIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVP 455 (456)
T ss_dssp EEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred EEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
T ss_conf 9989599999999999997499999999999998999978999999999999875517
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=100.00 E-value=1e-32 Score=231.40 Aligned_cols=238 Identities=16% Similarity=0.256 Sum_probs=190.1
Q ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEECCCC
Q ss_conf 99984689999993215999999999973003999839999879998899999985399988988899658855882798
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWR 830 (1024)
Q Consensus 751 via~D~DgTl~~~~~~~~~~~~~~l~~l~~~~~~~gi~vviaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~i~~~~~ 830 (1024)
++++|+||||.+++.. .+.++. +.++.+. |+.|+++|||++.++..+++.+++ ..|+++||+||+.+++++
T Consensus 5 li~~DlDGTL~~~~~~-~~~~~~-~~~~~~~----g~~v~i~TGR~~~~~~~~~~~~~~--~~~~~~i~~~G~~i~~~~- 75 (244)
T d1s2oa1 5 LLISDLDNTWVGDQQA-LEHLQE-YLGDRRG----NFYLAYATGRSYHSARELQKQVGL--MEPDYWLTAVGSEIYHPE- 75 (244)
T ss_dssp EEEECTBTTTBSCHHH-HHHHHH-HHHTTGG----GEEEEEECSSCHHHHHHHHHHHTC--CCCSEEEETTTTEEEETT-
T ss_pred EEEEECCCCCCCCCCC-HHHHHH-HHHHHCC----CCEEEEECCCCHHHHHHHHHHCCC--CCCCEEEECCCEEEEECC-
T ss_conf 9999896667999989-899999-9999819----998999889998999999997399--877658851625999716-
Q ss_pred CCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 65457100121202478322888876532004898865324568899417999905997525599999999851891799
Q 001705 831 DMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNL 910 (1024)
Q Consensus 831 ~~~~d~~~~~~i~~~w~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~L~~~~~~~~v 910 (1024)
..+..|..++.+.|..+.+...+..... ...+.......+++.+...........+.+.+.+......+..
T Consensus 76 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (244)
T d1s2oa1 76 --GLDQHWADYLSEHWQRDILQAIADGFEA-------LKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQV 146 (244)
T ss_dssp --EECHHHHHHHHTTCCHHHHHHHHHTCTT-------EEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEE
T ss_pred --CCCHHHHHHHHHHHHHHHHHHHHHHCCC-------CCCCCHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEE
T ss_conf --7416789888788768799999853554-------3325724406268999525211589999999999863234126
Q ss_pred EEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCCEEEECCCCCCCHHHHHCCCCCCC
Q ss_conf 99439908999409999899999999993999787899908999999687622799369944887899087863001388
Q 001705 911 VYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFK 990 (1024)
Q Consensus 911 ~~s~~~~~leV~P~~vSKg~ALr~L~~~~gi~~~~vvvfiGDs~N~D~~~Ml~~~~~~vamg~~~~Na~~~l~~~a~~~~ 990 (1024)
..+.+. ++||+|.++|||.|+++|+.++|++.+++++| ||+.| | ++||+.++++|+|+ ||++++++.|+...
T Consensus 147 ~~~~~~-~~~i~~~~~~K~~a~~~l~~~~gi~~~~~v~~-GD~~N-D-~~Ml~~~~~~vav~----na~~~lk~~a~~~~ 218 (244)
T d1s2oa1 147 IFSSGK-DVDLLPQRSNKGNATQYLQQHLAMEPSQTLVC-GDSGN-D-IGLFETSARGVIVR----NAQPELLHWYDQWG 218 (244)
T ss_dssp EEETTT-EEEEEETTCSHHHHHHHHHHHTTCCGGGEEEE-ECSGG-G-HHHHTSSSEEEECT----TCCHHHHHHHHHHC
T ss_pred EECCCC-EEEEEECCCCHHHHHHHHHHHCCCCHHHEEEE-CCCCC-C-HHHHHHCCCEEEEC----CCCHHHHHHHHCCC
T ss_conf 630781-89998676415577888877415773037997-58887-7-99996189189967----99999999863236
Q ss_pred CCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCC
Q ss_conf 777457899992682255682579999886026
Q 001705 991 REDVVPPDSPNIAYIEESYEPQDLSAALKAIKI 1023 (1024)
Q Consensus 991 ~~~v~~~~~~~~~~~~~~~~~~gi~~al~~~~~ 1023 (1024)
+...|++..+..+||.++|++|++
T Consensus 219 ---------~~~~~~~~~~~~~Gi~e~l~~f~~ 242 (244)
T d1s2oa1 219 ---------DSRHYRAQSSHAGAILEAIAHFDF 242 (244)
T ss_dssp ---------CTTEEECSSCHHHHHHHHHHHTTC
T ss_pred ---------CCCEEECCCCCCCHHHHHHHHHCC
T ss_conf ---------665377189971489999998286
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=2.5e-31 Score=222.23 Aligned_cols=237 Identities=15% Similarity=0.122 Sum_probs=163.0
Q ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEECCCC
Q ss_conf 99984689999993215999999999973003999839999879998899999985399988988899658855882798
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWR 830 (1024)
Q Consensus 751 via~D~DgTl~~~~~~~~~~~~~~l~~l~~~~~~~gi~vviaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~i~~~~~ 830 (1024)
+|++|+||||.+++..+++.+.+++++++++ |+.|+++|||++.++..++..+++ .+++||.||+.||++++
T Consensus 3 li~~DlDGTLl~~~~~i~~~~~~~l~~l~~~----Gi~~~i~TGR~~~~~~~~~~~l~~----~~~~i~~nG~~i~~~~~ 74 (285)
T d1nrwa_ 3 LIAIDLDGTLLNSKHQVSLENENALRQAQRD----GIEVVVSTGRAHFDVMSIFEPLGI----KTWVISANGAVIHDPEG 74 (285)
T ss_dssp EEEEECCCCCSCTTSCCCHHHHHHHHHHHHT----TCEEEEECSSCHHHHHHHHGGGTC----CCEEEEGGGTEEECTTC
T ss_pred EEEEECCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHHCC----CCEEEECCCEEEEECCC
T ss_conf 9999788664188794199999999999978----899999979998999999998099----85899547316995687
Q ss_pred CCCC----CCCHH--------HH-H-----------CCCCCCHHHHHHHHHHHHCCCCCCC-------------------
Q ss_conf 6545----71001--------21-2-----------0247832288887653200489886-------------------
Q 001705 831 DMVA----DGDYE--------AH-V-----------EYRWPGENVRSVVPRVARAEDGAED------------------- 867 (1024)
Q Consensus 831 ~~~~----d~~~~--------~~-i-----------~~~w~~~~i~~~l~~~~~~~~~~~~------------------- 867 (1024)
.... +.... .+ + ...+..+.+......+....+....
T Consensus 75 ~~i~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (285)
T d1nrwa_ 75 RLYHHETIDKKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFAYI 154 (285)
T ss_dssp CEEEECCCCHHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCEEEC
T ss_pred CEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEE
T ss_conf 43564168889999999999976971687417648860663777777777664057421055653333333101452010
Q ss_pred -CCCCCC-CCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCC
Q ss_conf -532456-889941799990599752559999999985189179999439908999409999899999999993999787
Q 001705 868 -DIVGFV-DASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSK 945 (1024)
Q Consensus 868 -~~~~~~-~~~~~~~~~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~leV~P~~vSKg~ALr~L~~~~gi~~~~ 945 (1024)
...+.. .........+.. .........+..... .....++++.+... ++||+|.++|||.|+++|++++|++.++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~-~ldi~~~~~~K~~ai~~l~~~~gi~~~~ 231 (285)
T d1nrwa_ 155 NSFQELFEADEPIDFYNILG-FSFFKEKLEAGWKRY-EHAEDLTLVSSAEH-NFELSSRKASKGQALKRLAKQLNIPLEE 231 (285)
T ss_dssp SCGGGGTSSSSCCCEEEEEE-ECSCHHHHHHHHHHH-TTCTTEEEECSSTT-EEEEEETTCSHHHHHHHHHHHTTCCGGG
T ss_pred CHHHHHHHCCCCHHHEEEEC-CCCHHHHHHHHHHHH-HCCCCEEEEEECCC-EEEEECCCCHHHHHHHHHHHHCCCCCCC
T ss_conf 31888763145211201311-232189999999986-32797699994796-8999555402366898877650557204
Q ss_pred EEEEECCCCCCCHHHHHCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHC
Q ss_conf 8999089999996876227993699448878990878630013887774578999926822556825799998860
Q 001705 946 MVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAI 1021 (1024)
Q Consensus 946 vvvfiGDs~N~D~~~Ml~~~~~~vamg~~~~Na~~~l~~~a~~~~~~~v~~~~~~~~~~~~~~~~~~gi~~al~~~ 1021 (1024)
+++| ||+.| | ++||+.++.+|||+ ||++++++.|+ +++.++.++||+.+|++|
T Consensus 232 vi~~-GD~~N-D-~~Ml~~a~~svam~----na~~~~k~~A~----------------~v~~~~~~~Gv~~~l~~l 284 (285)
T d1nrwa_ 232 TAAV-GDSLN-D-KSMLEAAGKGVAMG----NAREDIKSIAD----------------AVTLTNDEHGVAHMMKHL 284 (285)
T ss_dssp EEEE-ESSGG-G-HHHHHHSSEEEECT----TCCHHHHHHCS----------------EECCCGGGTHHHHHHHHT
T ss_pred EEEE-ECCHH-H-HHHHHHCCEEEEEC----CCCHHHHHHCC----------------EECCCCCCCHHHHHHHHH
T ss_conf 9999-29788-8-99998489189968----99899998589----------------882788755899999986
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.3e-31 Score=224.21 Aligned_cols=232 Identities=12% Similarity=0.123 Sum_probs=161.8
Q ss_pred EEEEECCCCCCCCCHH-HHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEECCC
Q ss_conf 9998468999999321-599999999997300399983999987999889999998539998898889965885588279
Q 001705 751 VIAADCYDSDGNTTET-FQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPW 829 (1024)
Q Consensus 751 via~D~DgTl~~~~~~-~~~~~~~~l~~l~~~~~~~gi~vviaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~i~~~~ 829 (1024)
+|++|+||||.++... ..+.++++++++++. |+.|+++|||++.++..+++++++ ..++||+||+.|++++
T Consensus 4 li~~DlDGTLl~~~~~~~~~~~~~~l~~l~~~----gi~~~i~TGR~~~~~~~~~~~l~~----~~~~i~~nGa~i~~~~ 75 (269)
T d1rlma_ 4 VIVTDMDGTFLNDAKTYNQPRFMAQYQELKKR----GIKFVVASGNQYYQLISFFPELKD----EISFVAENGALVYEHG 75 (269)
T ss_dssp EEEECCCCCCSCTTSCCCHHHHHHHHHHHHHH----TCEEEEECSSCHHHHGGGCTTTTT----TSEEEEGGGTEEEETT
T ss_pred EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHHCC----CCCEEEECEEEEEECC
T ss_conf 99994775672799839969999999999978----998999959998999999998286----6626741216999899
Q ss_pred CCCCC-----CCCHH---HHHCCC------------CC----CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEE
Q ss_conf 86545-----71001---212024------------78----32288887653200489886532456889941799990
Q 001705 830 RDMVA-----DGDYE---AHVEYR------------WP----GENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSI 885 (1024)
Q Consensus 830 ~~~~~-----d~~~~---~~i~~~------------w~----~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 885 (1024)
..... +..+. ...... +. .+............... ...........+++....
T Consensus 76 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 152 (269)
T d1rlma_ 76 KQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKP---VKDYQEIDDVLFKFSLNL 152 (269)
T ss_dssp EEEEECCCCHHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEE---ESCGGGCCSCEEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCHHHHHHHHHHCCCCCC---CCCHHHHCCHHEEEEECC
T ss_conf 08997326658889999999862484299981573688468818899998752345520---253766221024777508
Q ss_pred CCCCCHHHHHHHHHHHHH-CCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCC
Q ss_conf 599752559999999985-1891799994399089994099998999999999939997878999089999996876227
Q 001705 886 KPGAETRKVDNIRQRLRM-RGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVG 964 (1024)
Q Consensus 886 ~~~~~~~~~~el~~~L~~-~~~~~~v~~s~~~~~leV~P~~vSKg~ALr~L~~~~gi~~~~vvvfiGDs~N~D~~~Ml~~ 964 (1024)
. .. ....+.+.+.. ....+.++.+... ++||+|.++|||.||++|++++|++++++++| ||+.| | ++||+.
T Consensus 153 ~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~di~p~~~sK~~al~~l~~~lgi~~~~vi~~-GD~~N-D-~~Ml~~ 224 (269)
T d1rlma_ 153 P-DE---QIPLVIDKLHVALDGIMKPVTSGFG-FIDLIIPGLHKANGISRLLKRWDLSPQNVVAI-GDSGN-D-AEMLKM 224 (269)
T ss_dssp C-GG---GHHHHHHHHHHHTTTSSEEEECSTT-EEEEECTTCSHHHHHHHHHHHHTCCGGGEEEE-ECSGG-G-HHHHHH
T ss_pred C-HH---HHHHHHHHHHHHHHCCEEEEEECCC-EEEEECCCHHHHHHHHHHHHHHCCCCCCEEEE-CCCCC-H-HHHHHH
T ss_conf 8-89---9999999999985153389997582-68884586577788887766502142418999-08844-1-999985
Q ss_pred CCCEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHC
Q ss_conf 993699448878990878630013887774578999926822556825799998860
Q 001705 965 LHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAI 1021 (1024)
Q Consensus 965 ~~~~vamg~~~~Na~~~l~~~a~~~~~~~v~~~~~~~~~~~~~~~~~~gi~~al~~~ 1021 (1024)
++++|||+ ||++++|..|+ ++|.++.++||+.+|+++
T Consensus 225 ag~~vam~----Na~~~lk~~A~----------------~v~~~~~~~Gva~~i~~~ 261 (269)
T d1rlma_ 225 ARYSFAMG----NAAENIKQIAR----------------YATDDNNHEGALNVIQAV 261 (269)
T ss_dssp CSEEEECT----TCCHHHHHHCS----------------EECCCGGGTHHHHHHHHH
T ss_pred CCEEEEEC----CCCHHHHHHCC----------------EECCCCCCCHHHHHHHHH
T ss_conf 89189958----99899998478----------------881889845999999999
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.97 E-value=4.8e-32 Score=226.99 Aligned_cols=226 Identities=13% Similarity=0.155 Sum_probs=157.6
Q ss_pred EEEEECCCCCCCC-CHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEECCC
Q ss_conf 9998468999999-321599999999997300399983999987999889999998539998898889965885588279
Q 001705 751 VIAADCYDSDGNT-TETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPW 829 (1024)
Q Consensus 751 via~D~DgTl~~~-~~~~~~~~~~~l~~l~~~~~~~gi~vviaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~i~~~~ 829 (1024)
+|++|+||||.++ ...+++.+.++++++++. |+.|+++|||++.++..+.....+. .++++||+||+.+|++
T Consensus 3 ~if~DlDGTL~~~~~~~i~~~~~~al~~l~~~----gi~v~~~TGR~~~~~~~l~~~~~~~--~~~~~I~~nGa~i~~~- 75 (260)
T d2rbka1 3 ALFFDIDGTLVSFETHRIPSSTIEALEAAHAK----GLKIFIATGRPKAIINNLSELQDRN--LIDGYITMNGAYCFVG- 75 (260)
T ss_dssp EEEECSBTTTBCTTTSSCCHHHHHHHHHHHHT----TCEEEEECSSCGGGCCSCHHHHHTT--CCCEEEEGGGTEEEET-
T ss_pred EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHHHCC--CCCCEEECCCCCCCCC-
T ss_conf 99998888871899799899999999999978----8999998899889999999997158--8773476277401257-
Q ss_pred CCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHC-----CCCCCC-------------------------CCCCCCCCCCCE
Q ss_conf 86545710012120247832288887653200-----489886-------------------------532456889941
Q 001705 830 RDMVADGDYEAHVEYRWPGENVRSVVPRVARA-----EDGAED-------------------------DIVGFVDASSSR 879 (1024)
Q Consensus 830 ~~~~~d~~~~~~i~~~w~~~~i~~~l~~~~~~-----~~~~~~-------------------------~~~~~~~~~~~~ 879 (1024)
+... +...+.. +.++.++..+... ...... ....+.......
T Consensus 76 ~~~i----~~~~l~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (260)
T d2rbka1 76 EEVI----YKSAIPQ----EEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVI 147 (260)
T ss_dssp TEEE----EECCCCH----HHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCS
T ss_pred CCCC----CCCCCCH----HHHHHHHHHHHHCCCCEEEEECCCEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEE
T ss_conf 5321----0467888----9999999999973986899835755413640789999998632576765677673676469
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHH
Q ss_conf 79999059975255999999998518917999943990899940999989999999999399978789990899999968
Q 001705 880 CQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYE 959 (1024)
Q Consensus 880 ~~~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~leV~P~~vSKg~ALr~L~~~~gi~~~~vvvfiGDs~N~D~~ 959 (1024)
++..... . +....+......+.+..+.+. ++||+|.++||+.||++|++++|++.+++++| ||++| | +
T Consensus 148 ~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~-~~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~-GD~~N-D-~ 215 (260)
T d2rbka1 148 QMTPFIT----E----EEEKEVLPSIPTCEIGRWYPA-FADVTAKGDTKQKGIDEIIRHFGIKLEETMSF-GDGGN-D-I 215 (260)
T ss_dssp EEEECCC----H----HHHHHHGGGSTTCEEECSSTT-CCEEESTTCSHHHHHHHHHHHHTCCGGGEEEE-ECSGG-G-H
T ss_pred EEEECCC----H----HHHHHHHHHHCCCCCEEECCC-EEEEEECCCCHHHHHHHHHHHCCCCHHHEEEE-CCCCC-C-H
T ss_conf 8851278----8----999999987215540145586-79997488999999999987322357551676-58855-5-9
Q ss_pred HHHCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCC
Q ss_conf 7622799369944887899087863001388777457899992682255682579999886026
Q 001705 960 DLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAIKI 1023 (1024)
Q Consensus 960 ~Ml~~~~~~vamg~~~~Na~~~l~~~a~~~~~~~v~~~~~~~~~~~~~~~~~~gi~~al~~~~~ 1023 (1024)
+||+.++++|+|+ ||.+++++.|+ ++|+++.++||+.+|++|++
T Consensus 216 ~Ml~~a~~svav~----na~~~lk~~A~----------------~vt~~~~~~Gv~~~l~~~~~ 259 (260)
T d2rbka1 216 SMLRHAAIGVAMG----QAKEDVKAAAD----------------YVTAPIDEDGISKAMKHFGI 259 (260)
T ss_dssp HHHHHSSEEEECT----TSCHHHHHHSS----------------EECCCGGGTHHHHHHHHHTC
T ss_pred HHHHHCCEEEEEC----CCCHHHHHHCC----------------EEECCCCCCHHHHHHHHHCC
T ss_conf 9998489089958----99899998479----------------78088875689999998588
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=8.6e-31 Score=218.66 Aligned_cols=240 Identities=13% Similarity=0.112 Sum_probs=164.3
Q ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEECC-C
Q ss_conf 999846899999932159999999999730039998399998799988999999853999889888996588558827-9
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFP-W 829 (1024)
Q Consensus 751 via~D~DgTl~~~~~~~~~~~~~~l~~l~~~~~~~gi~vviaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~i~~~-~ 829 (1024)
+|++|+||||.+.+..+++.+++++++++++ |+.|+++|||++.++.+++..+++. ..++++|++||+.++.+ +
T Consensus 6 li~~DlDGTL~~~~~~i~~~~~~al~~L~~~----gi~v~i~TGR~~~~~~~~~~~l~l~-~~~~~~i~~nGa~i~~~~~ 80 (271)
T d1rkqa_ 6 LIAIDMDGTLLLPDHTISPAVKNAIAAARAR----GVNVVLTTGRPYAGVHNYLKELHME-QPGDYCITYNGALVQKAAD 80 (271)
T ss_dssp EEEECCCCCCSCTTSCCCHHHHHHHHHHHHT----TCEEEEECSSCGGGTHHHHHHTTCC-STTCEEEEGGGTEEEETTT
T ss_pred EEEEECCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHHCCC-CCCCEEEECCCEEEECCCC
T ss_conf 9999577664389795199999999999978----9999999899989999999984676-8985899868516750677
Q ss_pred CCCCCCCCH----HHHHC------------------CCCCC-HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEC
Q ss_conf 865457100----12120------------------24783-22888876532004898865324568899417999905
Q 001705 830 RDMVADGDY----EAHVE------------------YRWPG-ENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIK 886 (1024)
Q Consensus 830 ~~~~~d~~~----~~~i~------------------~~w~~-~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 886 (1024)
+.......+ ...+. +.... .........+....+... ...+...............
T Consensus 81 ~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 159 (271)
T d1rkqa_ 81 GSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVF-CEAEKMDPNTQFLKVMMID 159 (271)
T ss_dssp CCEEEECCBCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEE-CCGGGSCTTCCBCEEEEEC
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHCCEEEEEECCEEEECCCCCHHHHHHHHHHCCCCCCC-CHHHHCCCCCCEEEEEEEC
T ss_conf 708985020077888878888861640788731327740566116777777640576100-3165507655458999946
Q ss_pred CCCCH-HHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCC
Q ss_conf 99752-55999999998518917999943990899940999989999999999399978789990899999968762279
Q 001705 887 PGAET-RKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGL 965 (1024)
Q Consensus 887 ~~~~~-~~~~el~~~L~~~~~~~~v~~s~~~~~leV~P~~vSKg~ALr~L~~~~gi~~~~vvvfiGDs~N~D~~~Ml~~~ 965 (1024)
++... ...+.+...+. ....++.+.+. ++||+|.++|||.||++|+++++++.+++++| ||+.| | ++||+.+
T Consensus 160 ~~~~~~~~~~~l~~~~~---~~~~~~~~~~~-~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~-GD~~N-D-~~ml~~~ 232 (271)
T d1rkqa_ 160 EPAILDQAIARIPQEVK---EKYTVLKSAPY-FLEILDKRVNKGTGVKSLADVLGIKPEEIMAI-GDQEN-D-IAMIEYA 232 (271)
T ss_dssp CHHHHHHHHHHSCHHHH---HHEEEEEEETT-EEEEEETTCSHHHHHHHHHHHHTCCGGGEEEE-ECSGG-G-HHHHHHS
T ss_pred CHHHHHHHHHHHHHHHH---CCEEEEEECCC-EEEECCCCCCCCCCCCEEHHHCCCCHHCEEEE-ECCHH-H-HHHHHHC
T ss_conf 77789999999999850---56389995472-68852788876542000011001142017999-18676-7-9999858
Q ss_pred CCEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCC
Q ss_conf 9369944887899087863001388777457899992682255682579999886026
Q 001705 966 HKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAIKI 1023 (1024)
Q Consensus 966 ~~~vamg~~~~Na~~~l~~~a~~~~~~~v~~~~~~~~~~~~~~~~~~gi~~al~~~~~ 1023 (1024)
+++|+|+ ||.+++++.|+ +++.++.++||+.+|++|-+
T Consensus 233 ~~~~am~----na~~~lk~~a~----------------~i~~~~~~~Gv~~~l~~~~l 270 (271)
T d1rkqa_ 233 GVGVAVD----NAIPSVKEVAN----------------FVTKSNLEDGVAFAIEKYVL 270 (271)
T ss_dssp SEEEECT----TSCHHHHHHCS----------------EECCCTTTTHHHHHHHHHTT
T ss_pred CCEEEEC----CCCHHHHHHCC----------------EECCCCCCCHHHHHHHHHHC
T ss_conf 9189967----98799998589----------------88388985839999999847
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.97 E-value=2.1e-30 Score=216.08 Aligned_cols=228 Identities=15% Similarity=0.193 Sum_probs=161.8
Q ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEECCCC
Q ss_conf 99984689999993215999999999973003999839999879998899999985399988988899658855882798
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWR 830 (1024)
Q Consensus 751 via~D~DgTl~~~~~~~~~~~~~~l~~l~~~~~~~gi~vviaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~i~~~~~ 830 (1024)
+|++|+||||.+++..+++.++++++++++ ++.|+++|||++.++...+..++.. ..++||+||+.||.+++
T Consensus 4 li~~DlDGTL~~~~~~i~~~~~~al~~l~~-----~~~~~i~TGR~~~~~~~~~~~~~~~---~~~~I~~nGa~i~~~~~ 75 (267)
T d1nf2a_ 4 VFVFDLDGTLLNDNLEISEKDRRNIEKLSR-----KCYVVFASGRMLVSTLNVEKKYFKR---TFPTIAYNGAIVYLPEE 75 (267)
T ss_dssp EEEEECCCCCSCTTSCCCHHHHHHHHHHTT-----TSEEEEECSSCHHHHHHHHHHHSSS---CCCEEEGGGTEEEETTT
T ss_pred EEEEECCCCCCCCCCCCCHHHHHHHHHHHC-----CCEEEEECCCCHHHHHHHHHHHCCC---CCCEECCCCEEEEECCC
T ss_conf 999917756548959449999999999974-----9979998999858889999984656---77311369828995466
Q ss_pred CCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCC-----CCC--------------------CCCC-----CCCCCCCEE
Q ss_conf 6545710012120247832288887653200489-----886--------------------5324-----568899417
Q 001705 831 DMVADGDYEAHVEYRWPGENVRSVVPRVARAEDG-----AED--------------------DIVG-----FVDASSSRC 880 (1024)
Q Consensus 831 ~~~~d~~~~~~i~~~w~~~~i~~~l~~~~~~~~~-----~~~--------------------~~~~-----~~~~~~~~~ 880 (1024)
..... .....+.+..++......... .+. .... ........+
T Consensus 76 ~~i~~--------~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (267)
T d1nf2a_ 76 GVILN--------EKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTK 147 (267)
T ss_dssp EEEEE--------CCBCHHHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSE
T ss_pred CCCCC--------CCCCHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCHHHHHHHHHCCCCCEECCCHHHHHHHCCCEE
T ss_conf 64324--------5799899999999997338427874076688627748889898860787220476888744116237
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHC-CCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHH
Q ss_conf 999905997525599999999851-8917999943990899940999989999999999399978789990899999968
Q 001705 881 QSYSIKPGAETRKVDNIRQRLRMR-GFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYE 959 (1024)
Q Consensus 881 ~~~~~~~~~~~~~~~el~~~L~~~-~~~~~v~~s~~~~~leV~P~~vSKg~ALr~L~~~~gi~~~~vvvfiGDs~N~D~~ 959 (1024)
+.+. .+. ..++++.+.+... ...+.++.+... ++||+|.++|||.||++|+++++++.+++++| ||+.| | +
T Consensus 148 i~~~-~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~-~~di~~~~~~K~~ai~~l~~~~~i~~~~vva~-GD~~N-D-~ 219 (267)
T d1nf2a_ 148 LLLI-DTP---ERLDELKEILSERFKDVVKVFKSFPT-YLEIVPKNVDKGKALRFLRERMNWKKEEIVVF-GDNEN-D-L 219 (267)
T ss_dssp EEEE-CCH---HHHHHHHHHHHHHHTTTSEEEEEETT-EEEEECTTCCHHHHHHHHHHHHTCCGGGEEEE-ECSHH-H-H
T ss_pred EEEE-CCH---HHHHHHHHHHHHHHCCCEEEEEEECC-EEEECCCCCCHHHHHHHHHHHHCCCCCCEEEE-CCCCC-H-H
T ss_conf 8884-559---99999999998860783899996211-45655877751678999988603682208998-08844-0-9
Q ss_pred HHHCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCC
Q ss_conf 762279936994488789908786300138877745789999268225568257999988602
Q 001705 960 DLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAIK 1022 (1024)
Q Consensus 960 ~Ml~~~~~~vamg~~~~Na~~~l~~~a~~~~~~~v~~~~~~~~~~~~~~~~~~gi~~al~~~~ 1022 (1024)
+||+.++.+|+|+ ||++++++.|+ +++.++.++||+.+|+++-
T Consensus 220 ~ml~~~~~sva~~----na~~~~k~~A~----------------~i~~~~~~~Gva~~i~~ll 262 (267)
T d1nf2a_ 220 FMFEEAGLRVAME----NAIEKVKEASD----------------IVTLTNNDSGVSYVLERIS 262 (267)
T ss_dssp HHHTTCSEEEECT----TSCHHHHHHCS----------------EECCCTTTTHHHHHHTTBC
T ss_pred HHHHHCCCEEEEC----CCCHHHHHHCC----------------EECCCCCCCHHHHHHHHHH
T ss_conf 9998689089948----99899998589----------------8858887538999999998
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.95 E-value=4.3e-27 Score=194.10 Aligned_cols=220 Identities=12% Similarity=0.098 Sum_probs=157.1
Q ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEECCCC
Q ss_conf 99984689999993215999999999973003999839999879998899999985399988988899658855882798
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWR 830 (1024)
Q Consensus 751 via~D~DgTl~~~~~~~~~~~~~~l~~l~~~~~~~gi~vviaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~i~~~~~ 830 (1024)
+|++|+||||.+++..+++.++++++++.+. |+.|+++|||++..+...+...++ .+++|+.||+.+++...
T Consensus 4 ~i~~D~DGTL~~~~~~i~~~~~~~l~~l~~~----gi~v~~~TGR~~~~~~~~~~~~~~----~~~~i~~~g~~~~~~~~ 75 (230)
T d1wr8a_ 4 AISIDIDGTITYPNRMIHEKALEAIRRAESL----GIPIMLVTGNTVQFAEAASILIGT----SGPVVAEDGGAISYKKK 75 (230)
T ss_dssp EEEEESTTTTBCTTSCBCHHHHHHHHHHHHT----TCCEEEECSSCHHHHHHHHHHHTC----CSCEEEGGGTEEEETTE
T ss_pred EEEEECCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEEECCCHHHHHHHHHHCCC----CCCCCCCCCEEEECCCC
T ss_conf 9999167777379894699999999999867----995999927868889999986488----73200122201002421
Q ss_pred CCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 65457100121202478322888876532004898865324568899417999905997525599999999851891799
Q 001705 831 DMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNL 910 (1024)
Q Consensus 831 ~~~~d~~~~~~i~~~w~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~L~~~~~~~~v 910 (1024)
......+ .. + ......+....+... ...........+.+. ........++++. .........
T Consensus 76 -~~~~~~~----~~----~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~ 137 (230)
T d1wr8a_ 76 -RIFLASM----DE----E--WILWNEIRKRFPNAR---TSYTMPDRRAGLVIM-RETINVETVREII---NELNLNLVA 137 (230)
T ss_dssp -EEESCCC----SH----H--HHHHHHHHHHCTTCC---BCTTGGGCSSCEEEC-TTTSCHHHHHHHH---HHTTCSCEE
T ss_pred -CCCCCCC----CH----H--HHHHHHHHHHCCCCC---CEEECCCCEEEEEEE-CCCCCHHHHHHHH---HHHCCCEEE
T ss_conf -0002344----18----8--999999998626654---214414422458993-4611699999999---983665289
Q ss_pred EEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCCEEEECCCCCCCHHHHHCCCCCCC
Q ss_conf 99439908999409999899999999993999787899908999999687622799369944887899087863001388
Q 001705 911 VYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFK 990 (1024)
Q Consensus 911 ~~s~~~~~leV~P~~vSKg~ALr~L~~~~gi~~~~vvvfiGDs~N~D~~~Ml~~~~~~vamg~~~~Na~~~l~~~a~~~~ 990 (1024)
...+. ++||+|.++||+.|+++++.++|++++++++| ||+.| | ++||+.++.+|+|+ ||++++++.|+
T Consensus 138 -~~~~~-~iei~~~~~~K~~al~~l~~~~~i~~~~~~~i-GD~~N-D-i~ml~~ag~~vav~----na~~~~k~~A~--- 205 (230)
T d1wr8a_ 138 -VDSGF-AIHVKKPWINKGSGIEKASEFLGIKPKEVAHV-GDGEN-D-LDAFKVVGYKVAVA----QAPKILKENAD--- 205 (230)
T ss_dssp -EECSS-CEEEECTTCCHHHHHHHHHHHHTSCGGGEEEE-ECSGG-G-HHHHHHSSEEEECT----TSCHHHHTTCS---
T ss_pred -EECCC-EEEEEECCCCCCHHHCCCCCCCCCCHHHEEEE-ECCCC-H-HHHHHHCCEEEEEC----CCCHHHHHHCC---
T ss_conf -60894-89994077676133201121100133242566-26730-7-99999789079988----98799998579---
Q ss_pred CCCCCCCCCCCEEEECCCCCHHHHHHHHHHC
Q ss_conf 7774578999926822556825799998860
Q 001705 991 REDVVPPDSPNIAYIEESYEPQDLSAALKAI 1021 (1024)
Q Consensus 991 ~~~v~~~~~~~~~~~~~~~~~~gi~~al~~~ 1021 (1024)
+++.++..+|++.+++++
T Consensus 206 -------------~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 206 -------------YVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp -------------EECSSCHHHHHHHHHHHH
T ss_pred -------------EEECCCCCCHHHHHHHHH
T ss_conf -------------998999847899999999
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.95 E-value=7.1e-27 Score=192.65 Aligned_cols=220 Identities=10% Similarity=0.154 Sum_probs=164.1
Q ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEECCCC
Q ss_conf 99984689999993215999999999973003999839999879998899999985399988988899658855882798
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWR 830 (1024)
Q Consensus 751 via~D~DgTl~~~~~~~~~~~~~~l~~l~~~~~~~gi~vviaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~i~~~~~ 830 (1024)
++++|+||||.+++..+.+.+.++++.+.+. |+.|+++|||++..+..+....++ ...+|+.||+.++.+++
T Consensus 5 li~~D~DGTL~~~~~~i~~~~~~al~~l~~~----g~~v~~~TGr~~~~~~~~~~~~~~----~~~~i~~~G~~~~~~~~ 76 (225)
T d1l6ra_ 5 LAAIDVDGNLTDRDRLISTKAIESIRSAEKK----GLTVSLLSGNVIPVVYALKIFLGI----NGPVFGENGGIMFDNDG 76 (225)
T ss_dssp EEEEEHHHHSBCTTSCBCHHHHHHHHHHHHT----TCEEEEECSSCHHHHHHHHHHHTC----CSCEEEGGGTEEECTTS
T ss_pred EEEEECCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHCCC----CCEEEEECCEEEEECCC
T ss_conf 9999658877389994799999999999877----998999828860326999998198----85288604169996795
Q ss_pred CCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 65457100121202478322888876532004898865324568899417999905997525599999999851891799
Q 001705 831 DMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNL 910 (1024)
Q Consensus 831 ~~~~d~~~~~~i~~~w~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~L~~~~~~~~v 910 (1024)
. +...+..+.+...+..+...... .. ....... .....+.. + ....+.+...+... ...+
T Consensus 77 ~----------~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~--~~~~~~~~-~---~~~~~~~~~~~~~~--~~~i 136 (225)
T d1l6ra_ 77 S----------IKKFFSNEGTNKFLEEMSKRTSM-RS-ILTNRWR--EASTGFDI-D---PEDVDYVRKEAESR--GFVI 136 (225)
T ss_dssp C----------EEESSCSHHHHHHHHHHTTTSSC-BC-CGGGGGC--SSSEEEBC-C---GGGHHHHHHHHHTT--TEEE
T ss_pred C----------EEEECCHHHHHHHHHHHHHHCCC-CE-EECCCCE--EEEECCCC-C---HHHHHHHHHHHHHC--CCEE
T ss_conf 1----------78736868999999999873485-42-4203220--23100235-8---99999999987425--7299
Q ss_pred EEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCCEEEECCCCCCCHHHHHCCCCCCC
Q ss_conf 99439908999409999899999999993999787899908999999687622799369944887899087863001388
Q 001705 911 VYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFK 990 (1024)
Q Consensus 911 ~~s~~~~~leV~P~~vSKg~ALr~L~~~~gi~~~~vvvfiGDs~N~D~~~Ml~~~~~~vamg~~~~Na~~~l~~~a~~~~ 990 (1024)
..+ +. .+||+|.++||+.|+++|++++|++++++++| ||+.| | ++||+.++.+|+|+ ||.+++++.|+
T Consensus 137 ~~~-~~-~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~-GDs~n-D-~~m~~~a~~~vav~----na~~~~k~~ad--- 204 (225)
T d1l6ra_ 137 FYS-GY-SWHLMNRGEDKAFAVNKLKEMYSLEYDEILVI-GDSNN-D-MPMFQLPVRKACPA----NATDNIKAVSD--- 204 (225)
T ss_dssp EEE-TT-EEEEEETTCSHHHHHHHHHHHTTCCGGGEEEE-CCSGG-G-HHHHTSSSEEEECT----TSCHHHHHHCS---
T ss_pred EEC-CC-EEEECCCCCCHHHHHHHHHHHHCCCHHHEEEE-CCCCC-H-HHHHHHCCEEEEEC----CCCHHHHHHCC---
T ss_conf 988-91-79963876522789998766510023022564-48843-5-99999779089988----97599998499---
Q ss_pred CCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCC
Q ss_conf 777457899992682255682579999886026
Q 001705 991 REDVVPPDSPNIAYIEESYEPQDLSAALKAIKI 1023 (1024)
Q Consensus 991 ~~~v~~~~~~~~~~~~~~~~~~gi~~al~~~~~ 1023 (1024)
++++.+..+||+.++++|++
T Consensus 205 -------------~v~~~~~~~gi~~~l~~~~l 224 (225)
T d1l6ra_ 205 -------------FVSDYSYGEEIGQIFKHFEL 224 (225)
T ss_dssp -------------EECSCCTTHHHHHHHHHTTC
T ss_pred -------------EEECCCCCCHHHHHHHHHCC
T ss_conf -------------99898984889999998678
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.95 E-value=2.8e-27 Score=195.39 Aligned_cols=231 Identities=11% Similarity=0.071 Sum_probs=156.4
Q ss_pred EEEEECCCCCC-CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCC--CCCCEEEECCCCEEEC
Q ss_conf 99984689999-99321599999999997300399983999987999889999998539998--8988899658855882
Q 001705 751 VIAADCYDSDG-NTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNI--EDFDAIVCNSGSELYF 827 (1024)
Q Consensus 751 via~D~DgTl~-~~~~~~~~~~~~~l~~l~~~~~~~gi~vviaTGR~~~~~~~~l~~~~i~~--~~~d~lI~~nGa~i~~ 827 (1024)
+|++|+||||. +.+..+++.+++++++++++ |+.|+++|||++.++...+..+++.. ......|+.||+.+|.
T Consensus 12 li~~DlDGTLl~~~~~~i~~~~~~al~~l~~~----Gi~v~i~TGR~~~~~~~~~~~l~~~~~~~~~~~~i~~~g~~~~~ 87 (283)
T d2b30a1 12 LLLIDFDGTLFVDKDIKVPSENIDAIKEAIEK----GYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIVYD 87 (283)
T ss_dssp EEEEETBTTTBCCTTTCSCHHHHHHHHHHHHH----TCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTEEEC
T ss_pred EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEC
T ss_conf 99998888884898996799999999999988----99899986999899999999847665455577437875458984
Q ss_pred CCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHH-----------------------------CCCCCCCCCCC---CCCC
Q ss_conf 798654571001212024783228888765320-----------------------------04898865324---5688
Q 001705 828 PWRDMVADGDYEAHVEYRWPGENVRSVVPRVAR-----------------------------AEDGAEDDIVG---FVDA 875 (1024)
Q Consensus 828 ~~~~~~~d~~~~~~i~~~w~~~~i~~~l~~~~~-----------------------------~~~~~~~~~~~---~~~~ 875 (1024)
+.+....... + .......++..+.. ........... ....
T Consensus 88 ~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (283)
T d2b30a1 88 QIGYTLLDET----I----ETDVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLKY 159 (283)
T ss_dssp TTCCEEEECC----C----CHHHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHHHHTTC
T ss_pred CCCCEEEECC----C----CHHHHHHHHHHHHHHCCCCEEEEEECCEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHC
T ss_conf 8996831025----6----8788899998877506651589973230687046327788888741165533667777402
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHH-CCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCC
Q ss_conf 9941799990599752559999999985-189179999439908999409999899999999993999787899908999
Q 001705 876 SSSRCQSYSIKPGAETRKVDNIRQRLRM-RGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKG 954 (1024)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~el~~~L~~-~~~~~~v~~s~~~~~leV~P~~vSKg~ALr~L~~~~gi~~~~vvvfiGDs~ 954 (1024)
....++.+. .+... .+++.+.+.. ......+..+... ++||.|.++||+.|+++|++.++++.+++++| ||+.
T Consensus 160 ~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~K~~~l~~l~~~~~i~~~~vi~~-GD~~ 233 (283)
T d2b30a1 160 RTMNKLMIV-LDPSE---SKTVIGNLKQKFKNKLTIFTTYNG-HAEVTKLGHDKYTGINYLLKHYNISNDQVLVV-GDAE 233 (283)
T ss_dssp CCCSEEEEC-CCTTT---HHHHHHHHHHHSTTTEEEEECTTS-CEEEEETTCCHHHHHHHHHHHTTCCGGGEEEE-ECSG
T ss_pred CCCEEEEEE-CCHHH---HHHHHHHHHHHHCCCCEEEEECCE-EEEECCCCCHHHHHHHHHHHHCCCCCCEEEEE-CCCH
T ss_conf 661389996-68899---999999999984566137885240-67624776505778887766410020207996-4876
Q ss_pred CCCHHHHHCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCCC-CHHHHHHHHHHC
Q ss_conf 9996876227993699448878990878630013887774578999926822556-825799998860
Q 001705 955 DTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESY-EPQDLSAALKAI 1021 (1024)
Q Consensus 955 N~D~~~Ml~~~~~~vamg~~~~Na~~~l~~~a~~~~~~~v~~~~~~~~~~~~~~~-~~~gi~~al~~~ 1021 (1024)
| | ++||+.++++|+|+ ||++++++.|+ ++++.+ .++|++.+|+++
T Consensus 234 N-D-~~Ml~~a~~~va~~----na~~~~k~~a~----------------~v~~~~~~~g~v~~~l~~~ 279 (283)
T d2b30a1 234 N-D-IAMLSNFKYSFAVA----NATDSAKSHAK----------------CVLPVSHREGAVAYLLKKV 279 (283)
T ss_dssp G-G-HHHHHSCSEEEECT----TCCHHHHHHSS----------------EECSSCTTTTHHHHHHHHH
T ss_pred H-H-HHHHHHCCCEEEEC----CCCHHHHHHCC----------------EEECCCCCCCHHHHHHHHH
T ss_conf 3-6-99998589189968----99899998489----------------9999848886999999999
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.94 E-value=1.7e-25 Score=183.55 Aligned_cols=193 Identities=27% Similarity=0.344 Sum_probs=152.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCC-CCCCHHHHHHHHHHCCCCC
Q ss_conf 998999644689899831100125765455579983058875320799995899983899-8789999999994141557
Q 001705 428 GMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPD-PKKNVTTLLKAFGECQPLR 506 (1024)
Q Consensus 428 GiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld-~~Kgi~~ll~A~~~l~~l~ 506 (1024)
|||.+.|.|... ...........+.++.. +++++|+|+||++ ++||++.+++|+..+....
T Consensus 1 gid~~~~~~~~~-----------------~~~~~~~~~~~~~~~~l-~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~ 62 (196)
T d2bfwa1 1 GIDCSFWNESYL-----------------TGSRDERKKSLLSKFGM-DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKK 62 (196)
T ss_dssp CCCTTTSSGGGS-----------------CSCHHHHHHHHHHHTTC-CSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSG
T ss_pred CCCHHHCCCCCC-----------------CCHHHHHHHHHHHHHCC-CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 918133089888-----------------70168999999999597-999889997688811049999999988641125
Q ss_pred CCCCEEE-EEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHH
Q ss_conf 9983999-991599930001331589999999998719999778399999897999999723189399923898988899
Q 001705 507 ELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLT 585 (1024)
Q Consensus 507 ~~~~l~L-IiG~~~~~~~l~~~~~~~~~~i~~li~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~Dv~v~ps~~Egfgl~ 585 (1024)
..+++.+ ++|.++. .+...+..+... +...+.+.+.++.+++..+|+.| |++|+||..|+||++
T Consensus 63 ~~~~~~l~i~G~g~~---------~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~----di~v~ps~~e~~~~~ 127 (196)
T d2bfwa1 63 EFQEMRFIIIGKGDP---------ELEGWARSLEEK--HGNVKVITEMLSREFVRELYGSV----DFVIIPSYFEPFGLV 127 (196)
T ss_dssp GGGGEEEEEECCBCH---------HHHHHHHHHHHH--CTTEEEECSCCCHHHHHHHHTTC----SEEEECCSCCSSCHH
T ss_pred CCCCEEEEEEEECCC---------CHHHHHHHHHHC--CCEEEEEEECCCCCCCHHCCCCC----CCCCCCCCCCCCCCC
T ss_conf 788818999961355---------213454332211--31157753023321100001232----334432221123322
Q ss_pred HHHHHHCCCCEEECCCCCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHCCC
Q ss_conf 9999984996998188872111304985899399999999999999973-99999999999999996099
Q 001705 586 IIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLA-DKNMWSECRKNGLKNIHRFS 654 (1024)
Q Consensus 586 llEAmA~G~PVIat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~a~~~~~~fs 654 (1024)
++|||+||+|||+++.|+..|++.+ .+|++++|.|+++++++|.+++. +++.+.++++++++++..||
T Consensus 128 ~~Eam~~G~pvI~~~~~~~~e~i~~-~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~fs 196 (196)
T d2bfwa1 128 ALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFS 196 (196)
T ss_dssp HHHHHHTTCEEEEESCHHHHHHCCT-TTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHCCCEEEECCCCCCCEEECC-CCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
T ss_conf 0133314860465178853201028-73146789999999999999995799999999999999998378
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.91 E-value=8e-24 Score=172.39 Aligned_cols=210 Identities=12% Similarity=0.038 Sum_probs=134.7
Q ss_pred EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEECCC
Q ss_conf 99998468999999321599999999997300399983999987999889999998539998898889965885588279
Q 001705 750 IVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPW 829 (1024)
Q Consensus 750 lvia~D~DgTl~~~~~~~~~~~~~~l~~l~~~~~~~gi~vviaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~i~~~~ 829 (1024)
-+|++|+|||+.++. .++.+++++++++++ |+.|++||||++.++..++..+++ .+++||+||+.+++++
T Consensus 3 Kli~~DlDGTLl~~~--~~~~~~~ai~~l~~~----G~~~~~aTGR~~~~~~~~~~~~~~----~~~~i~~nGa~i~~~~ 72 (243)
T d1wzca1 3 RLIFLDIDKTLIPGY--EPDPAKPIIEELKDM----GFEIIFNSSKTRAEQEYYRKELEV----ETPFISENGSAIFIPK 72 (243)
T ss_dssp EEEEECCBTTTBSSS--CSGGGHHHHHHHHHT----TEEEEEECSSCHHHHHHHHHHHTC----CSCEEETTTTEEEECT
T ss_pred EEEEEECCCCCCCCC--CCHHHHHHHHHHHHC----CCEEEEEECCCHHHHHHHHHHHCC----CCCCCCCCCCEEECCC
T ss_conf 799992777778999--888999999999988----999999919888999999998364----4210014784897089
Q ss_pred CCCCCCCCHHHHHC-----CCCCCHHHHHHHHHHHHCCCCCCC-------------CCCCC--CCCCCCEEEEEEECCCC
Q ss_conf 86545710012120-----247832288887653200489886-------------53245--68899417999905997
Q 001705 830 RDMVADGDYEAHVE-----YRWPGENVRSVVPRVARAEDGAED-------------DIVGF--VDASSSRCQSYSIKPGA 889 (1024)
Q Consensus 830 ~~~~~d~~~~~~i~-----~~w~~~~i~~~l~~~~~~~~~~~~-------------~~~~~--~~~~~~~~~~~~~~~~~ 889 (1024)
+.......+..... .....+.+...+............ ..... ......+....... ..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 151 (243)
T d1wzca1 73 GYFPFDVKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFEW-SR 151 (243)
T ss_dssp TCCC----------CEEEECSCCHHHHHHHHHHHHHHHTCBCGGGSCHHHHHHHHCCCGGGHHHHTCCSSEEEECBC-SS
T ss_pred CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHH-HH
T ss_conf 84303543067788999987521999999997655311210031344888877624764677888863134113444-46
Q ss_pred CHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHC-CCCCCEEEEECCCCCCCHHHHHCCCCCE
Q ss_conf 525599999999851891799994399089994099998999999999939-9978789990899999968762279936
Q 001705 890 ETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWG-IDLSKMVVFVGEKGDTDYEDLLVGLHKT 968 (1024)
Q Consensus 890 ~~~~~~el~~~L~~~~~~~~v~~s~~~~~leV~P~~vSKg~ALr~L~~~~g-i~~~~vvvfiGDs~N~D~~~Ml~~~~~~ 968 (1024)
. ...+. ...... ....+. +++++|.++||+.|+++++++++ ++.+++++| ||+.| | ++||+.++++
T Consensus 152 ~--~~~~~---~~~~~~----~~~~~~-~~~~~~~~~~K~~al~~l~~~~~~~~~~~~~a~-GD~~N-D-~~Ml~~a~~~ 218 (243)
T d1wzca1 152 D--GWEEV---LVEGGF----KVTMGS-RFYTVHGNSDKGKAAKILLDFYKRLGQIESYAV-GDSYN-D-FPMFEVVDKV 218 (243)
T ss_dssp S--CHHHH---HHHTTC----EEEECS-SSEEEECSCCHHHHHHHHHHHHHTTSCEEEEEE-ECSGG-G-HHHHTTSSEE
T ss_pred H--HHHHH---HHHCCE----EEEECC-CCCCHHHHHCCHHHHHHHHHHHCCCCCCCEEEE-CCCHH-H-HHHHHCCCCE
T ss_conf 7--89986---552376----884236-530010311007799999998359991419998-49885-8-9999849938
Q ss_pred EEECCCCCCCHHHHHCCCC
Q ss_conf 9944887899087863001
Q 001705 969 LILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 969 vamg~~~~Na~~~l~~~a~ 987 (1024)
|+|+ ||+++++..++
T Consensus 219 va~~----Na~~~~~~~~~ 233 (243)
T d1wzca1 219 FIVG----SLKHKKAQNVS 233 (243)
T ss_dssp EEES----SCCCTTCEEES
T ss_pred EEEC----CCCHHHHHHHH
T ss_conf 9927----99868870231
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.90 E-value=1.3e-23 Score=171.11 Aligned_cols=207 Identities=10% Similarity=0.046 Sum_probs=128.6
Q ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEECCCC
Q ss_conf 99984689999993215999999999973003999839999879998899999985399988988899658855882798
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWR 830 (1024)
Q Consensus 751 via~D~DgTl~~~~~~~~~~~~~~l~~l~~~~~~~gi~vviaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~i~~~~~ 830 (1024)
+|++|+||||.+++..+++.+++++++++++ |+.|+++|||++.++...+..+++. +.++||+||+.|+....
T Consensus 6 li~~DlDGTLl~~~~~i~~~~~~al~~l~~~----Gi~~~i~TGR~~~~~~~~~~~~~~~---~~~~i~~nGa~i~~~~~ 78 (232)
T d1xvia_ 6 LVFSDLDGTLLDSHSYDWQPAAPWLTRLREA----NVPVILCSSKTSAEMLYLQKTLGLQ---GLPLIAENGAVIQLAEQ 78 (232)
T ss_dssp EEEEECTTTTSCSSCCSCCTTHHHHHHHHHT----TCCEEEECSSCHHHHHHHHHHTTCT---TSCEEEGGGTEEECCTT
T ss_pred EEEEECCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEEECCCHHHCHHHHHHHCCC---CCEEECCCCEEEEECCC
T ss_conf 9999788875289694799999999999977----9989999689736530688873457---84597169769993577
Q ss_pred CCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC---------------CC--CCCCCCCCCEEEEEEECCCCCHHH
Q ss_conf 6545710012120247832288887653200489886---------------53--245688994179999059975255
Q 001705 831 DMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAED---------------DI--VGFVDASSSRCQSYSIKPGAETRK 893 (1024)
Q Consensus 831 ~~~~d~~~~~~i~~~w~~~~i~~~l~~~~~~~~~~~~---------------~~--~~~~~~~~~~~~~~~~~~~~~~~~ 893 (1024)
......+.. .........+................ .. .........+....... .....
T Consensus 79 -~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 154 (232)
T d1xvia_ 79 -WQEIDGFPR-IISGISHGEISLVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWR--DSDER 154 (232)
T ss_dssp -CTTSTTTTE-EECSSCHHHHHHHHHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEEC--SCHHH
T ss_pred -CCCCCHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCEEEEECCC--CCHHH
T ss_conf -531201455-55577899998765422222021212332023555433310230134554411124531022--52999
Q ss_pred HHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHH---HCCCCCCEEEEECCCCCCCHHHHHCCCCCEEE
Q ss_conf 999999998518917999943990899940999989999999999---39997878999089999996876227993699
Q 001705 894 VDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIR---WGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLI 970 (1024)
Q Consensus 894 ~~el~~~L~~~~~~~~v~~s~~~~~leV~P~~vSKg~ALr~L~~~---~gi~~~~vvvfiGDs~N~D~~~Ml~~~~~~va 970 (1024)
...+........ . ...... .+++++|.+++|+.|+++|++. +|++.+++++| ||+.| | ++||+.++++|+
T Consensus 155 ~~~~~~~~~~~~--~-~~~~~~-~~~~~~~~~~~K~~~~~~l~~~~~~l~i~~~~~iaf-GD~~N-D-l~Ml~~a~~~va 227 (232)
T d1xvia_ 155 MAQFTARLNELG--L-QFMQGA-RFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLGL-GDGPN-D-APLLEVMDYAVI 227 (232)
T ss_dssp HHHHHHHHHHTT--E-EEEECS-SCEEEEETTCCHHHHHHHHHHHHHHHHSSCCEEEEE-ESSGG-G-HHHHHTSSEEEE
T ss_pred HHHHHHHHHHCC--C-EEEECC-CEEECCCCCCHHHHHHHHHHHHHHHCCCCHHCEEEE-CCCHH-H-HHHHHHCCEEEE
T ss_conf 988998765305--5-033225-302214788517899999999999759895219998-49786-8-999981990899
Q ss_pred ECCCCCCCH
Q ss_conf 448878990
Q 001705 971 LRGSVMYGS 979 (1024)
Q Consensus 971 mg~~~~Na~ 979 (1024)
|+ ||.
T Consensus 228 V~----n~~ 232 (232)
T d1xvia_ 228 VK----GLN 232 (232)
T ss_dssp CC----CCC
T ss_pred EE----CCC
T ss_conf 71----899
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.90 E-value=7.7e-24 Score=172.51 Aligned_cols=216 Identities=12% Similarity=0.085 Sum_probs=130.6
Q ss_pred EEEEECCCCCCC----C-CHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEE
Q ss_conf 999846899999----9-32159999999999730039998399998799988999999853999889888996588558
Q 001705 751 VIAADCYDSDGN----T-TETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSEL 825 (1024)
Q Consensus 751 via~D~DgTl~~----~-~~~~~~~~~~~l~~l~~~~~~~gi~vviaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~i 825 (1024)
+|++|+||||.+ + ...+++.++++++++++ ++.|+|+|||++..+..... .+++++|+||+.+
T Consensus 2 Li~~DlDGTL~~~~~~~~~~~i~~~~~~~l~~l~~-----~~~v~i~TGR~~~~l~~~~~-------~~~~~~~~ng~~~ 69 (229)
T d1u02a_ 2 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKE-----RFDTYIVTGRSPEEISRFLP-------LDINMICYHGACS 69 (229)
T ss_dssp EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHH-----HSEEEEECSSCHHHHHHHSC-------SSCEEEEGGGTEE
T ss_pred EEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHH-----CCCEEEECCCCHHHHHHHCC-------CCCCEEECCEEEE
T ss_conf 89999557778997896548899999999999850-----99789996998799664347-------6662896470898
Q ss_pred ECCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCC---CHHHHHHHHHHHH
Q ss_conf 8279865457100121202478322888876532004898865324568899417999905997---5255999999998
Q 001705 826 YFPWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGA---ETRKVDNIRQRLR 902 (1024)
Q Consensus 826 ~~~~~~~~~d~~~~~~i~~~w~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~el~~~L~ 902 (1024)
+..+ ......... ....| .+.+...+..+....++ .......+...+.+.... .....+.+.+.+.
T Consensus 70 ~~~~-~~~~~~~~~--~~~~~-~~~i~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 138 (229)
T d1u02a_ 70 KING-QIVYNNGSD--RFLGV-FDRIYEDTRSWVSDFPG-------LRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIAR 138 (229)
T ss_dssp EETT-EEEECTTGG--GGHHH-HHHHHHHHTTHHHHSTT-------CEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHH
T ss_pred ECCC-CEEEECCHH--HHHHH-HHHHHHHHHHHHCCCCC-------CEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH
T ss_conf 3499-346623305--44999-99999986776506677-------2103554213422033324457999999999852
Q ss_pred HCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCCEEEECCCCCCCHHHH
Q ss_conf 51891799994399089994099998999999999939997878999089999996876227993699448878990878
Q 001705 903 MRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKL 982 (1024)
Q Consensus 903 ~~~~~~~v~~s~~~~~leV~P~~vSKg~ALr~L~~~~gi~~~~vvvfiGDs~N~D~~~Ml~~~~~~vamg~~~~Na~~~l 982 (1024)
.... .+.+.. .++||+|+++|||.||++|+.+ +++++| ||+.| | ++||+.++.+++|+ ||..
T Consensus 139 ~~~~---~~~~~~-~~idi~p~g~~Kg~al~~l~~~-----~~~i~~-GDs~N-D-~~Mf~~~~~~~av~----~g~~-- 200 (229)
T d1u02a_ 139 IFGV---ETYYGK-MIIELRVPGVNKGSAIRSVRGE-----RPAIIA-GDDAT-D-EAAFEANDDALTIK----VGEG-- 200 (229)
T ss_dssp HHTC---EEEECS-SEEEEECTTCCHHHHHHHHHTT-----SCEEEE-ESSHH-H-HHHHHTTTTSEEEE----ESSS--
T ss_pred CCCE---EEEEEC-EEEEEECCCCCHHHHHHHHHCC-----CCCEEE-CCCCC-H-HHHHHCCCCEEEEE----ECCC--
T ss_conf 3876---999602-1899736989889999997440-----445664-38887-0-99996028828999----6898--
Q ss_pred HCCCCCCCCCCCCCCCCCCEEEECCCCC-HHHHHHHHHHCCC
Q ss_conf 6300138877745789999268225568-2579999886026
Q 001705 983 LHGEDAFKREDVVPPDSPNIAYIEESYE-PQDLSAALKAIKI 1023 (1024)
Q Consensus 983 ~~~a~~~~~~~v~~~~~~~~~~~~~~~~-~~gi~~al~~~~~ 1023 (1024)
+.+|+ |.+.++. ..++.+.|+.++.
T Consensus 201 ~~~A~----------------~~~~~~~ev~~~l~~l~~~~~ 226 (229)
T d1u02a_ 201 ETHAK----------------FHVADYIEMRKILKFIEMLGV 226 (229)
T ss_dssp CCCCS----------------EEESSHHHHHHHHHHHHHHHH
T ss_pred CCCCE----------------EECCCHHHHHHHHHHHHHHHH
T ss_conf 76672----------------875999999999999999986
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.88 E-value=5e-22 Score=160.47 Aligned_cols=157 Identities=26% Similarity=0.344 Sum_probs=125.4
Q ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCC
Q ss_conf 99958999838998789999999994141557998399999159993000133158999999999871999977839999
Q 001705 475 PHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHH 554 (1024)
Q Consensus 475 ~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIiG~~~~~~~l~~~~~~~~~~i~~li~~~~l~~~V~~~g~~ 554 (1024)
.....++++||+.+.||++.+++|+.+++. ..+ +++|.+.+.+. ...+.+.+.+.. .++|.|+|++
T Consensus 10 ~~~~~~l~iGrl~~~K~~~~~i~a~~~l~~----~~l-~ivg~~~~~~~--------~~~~~~~~~~~~-~~~v~~~g~~ 75 (166)
T d2f9fa1 10 CYGDFWLSVNRIYPEKRIELQLEVFKKLQD----EKL-YIVGWFSKGDH--------AERYARKIMKIA-PDNVKFLGSV 75 (166)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHCTT----SCE-EEEBCCCTTST--------HHHHHHHHHHHS-CTTEEEEESC
T ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHHHCC----CEE-EEEEECCCCCC--------HHHHHHHHCCCC-CCCEEEEECC
T ss_conf 999999999237543499999999998339----749-99972244542--------233332202356-6758874212
Q ss_pred CCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHH
Q ss_conf 98979999997231893999238989888999999984996998188872111304985899399999999999999973
Q 001705 555 KQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLA 634 (1024)
Q Consensus 555 ~~~el~~ly~~A~~~~Dv~v~ps~~Egfgl~llEAmA~G~PVIat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~ 634 (1024)
+.+++..+|+.| |++|+||..|+||++++|||+||+|||+++.++..|++.++.+|+++++ |+++++++|.++++
T Consensus 76 ~~~~~~~~~~~a----d~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~~~-d~~~~~~~i~~l~~ 150 (166)
T d2f9fa1 76 SEEELIDLYSRC----KGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNA-DVNEIIDAMKKVSK 150 (166)
T ss_dssp CHHHHHHHHHHC----SEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEECS-CHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCC-CHHHHHHHHHHHHH
T ss_conf 211122222222----2233212211233221101122332205527864033048841246899-99999999999980
Q ss_pred CHHHHHHHHHHHHHHHHCC
Q ss_conf 9999999999999999609
Q 001705 635 DKNMWSECRKNGLKNIHRF 653 (1024)
Q Consensus 635 d~~~~~~~~~~a~~~~~~f 653 (1024)
+++. +++++.+++++|
T Consensus 151 ~~~~---~~~~~~~~a~~f 166 (166)
T d2f9fa1 151 NPDK---FKKDCFRRAKEF 166 (166)
T ss_dssp CTTT---THHHHHHHHHTC
T ss_pred CHHH---HHHHHHHHHHCC
T ss_conf 9999---999999998579
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=3.5e-22 Score=161.47 Aligned_cols=217 Identities=12% Similarity=0.085 Sum_probs=122.5
Q ss_pred EEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHH-HHCCCCCCCCCEEEECCCCEEEC
Q ss_conf 69999846899999932159999999999730039998399998799988999999-85399988988899658855882
Q 001705 749 LIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAI-RRCTVNIEDFDAIVCNSGSELYF 827 (1024)
Q Consensus 749 llvia~D~DgTl~~~~~~~~~~~~~~l~~l~~~~~~~gi~vviaTGR~~~~~~~~l-~~~~i~~~~~d~lI~~nGa~i~~ 827 (1024)
++++ +|+||||++++..+++.+++++++++++ |+.| ++|||........+ ..+++. ..+.++++++|+.++.
T Consensus 2 ~i~l-FDlDGTLl~~~~~is~~~~~~i~~l~~~----g~~~-i~tgrr~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~ 74 (244)
T d2fuea1 2 VLCL-FDVDGTLTPARQKIDPEVAAFLQKLRSR----VQIG-VVGGSDYCKIAEQLGDGDEVI-EKFDYVFAENGTVQYK 74 (244)
T ss_dssp EEEE-EESBTTTBSTTSCCCHHHHHHHHHHTTT----SEEE-EECSSCHHHHHHHHSSTTTHH-HHCSEEEEGGGTEEEE
T ss_pred EEEE-ECCCCCCCCCCCCCCHHHHHHHHHHHHC----CCEE-EEECCCHHHHHHHHHHHHCCC-CCCCEEECCCCEEECC
T ss_conf 7999-8445683499895899999999999868----9999-996698065134566542334-5542231144002303
Q ss_pred CCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCC--HHH------------
Q ss_conf 798654571001212024783228888765320048988653245688994179999059975--255------------
Q 001705 828 PWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAE--TRK------------ 893 (1024)
Q Consensus 828 ~~~~~~~d~~~~~~i~~~w~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------------ 893 (1024)
.. .......+........................... ..............+....... ...
T Consensus 75 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (244)
T d2fuea1 75 HG-RLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPK---KRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKI 150 (244)
T ss_dssp TT-EECCCCCHHHHHCHHHHHHHHHHHHHHHHTCCCSC---CCSCSEEECSSCEEECSSCTTCCHHHHHHHHHHHHHHCH
T ss_pred CC-CCCEEECHHHHHHHHHHHHHHHHHHHHHHEECCCC---CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHH
T ss_conf 78-51212013577766677777764233310110221---124212344444202322333203454566653001036
Q ss_pred HHHHHHHH-HHC-CCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCC----CCCCHHHHHCCCC-
Q ss_conf 99999999-851-8917999943990899940999989999999999399978789990899----9999687622799-
Q 001705 894 VDNIRQRL-RMR-GFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEK----GDTDYEDLLVGLH- 966 (1024)
Q Consensus 894 ~~el~~~L-~~~-~~~~~v~~s~~~~~leV~P~~vSKg~ALr~L~~~~gi~~~~vvvfiGDs----~N~D~~~Ml~~~~- 966 (1024)
..+....+ ... .....+..+.. .++||+|+++|||.||++|++ ++.+++++| ||+ +| | ++||+.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~-~~lei~~~~vsKg~al~~L~~---~~~~ev~af-GD~~~~G~N-D-~eml~~a~~ 223 (244)
T d2fuea1 151 REKFVEALKTEFAGKGLRFSRGGM-ISFDVFPEGWDKRYCLDSLDQ---DSFDTIHFF-GNETSPGGN-D-FEIFADPRT 223 (244)
T ss_dssp HHHHHHHHHHHTTTSCEEEECCSS-SCEEEEETTCSTTHHHHHHTT---SCCSEEEEE-ESCCSTTST-T-HHHHHSTTS
T ss_pred HHHHHHHHHHHHHCCCEEEEECCC-CCCEECCHHCCHHHHHHHHHC---CCHHHEEEE-CCCCCCCCC-C-HHHHHCCCC
T ss_conf 788899999885103426764167-600320322027899999966---984459998-688999997-2-999971798
Q ss_pred CEEEECCCCCCCHHHHHCCCC
Q ss_conf 369944887899087863001
Q 001705 967 KTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 967 ~~vamg~~~~Na~~~l~~~a~ 987 (1024)
.+++|+ ||.++++..++
T Consensus 224 ~~~av~----na~~~~k~~~~ 240 (244)
T d2fuea1 224 VGHSVV----SPQDTVQRCRE 240 (244)
T ss_dssp EEEECS----SHHHHHHHHHH
T ss_pred CEEECC----CHHHHHHHHHH
T ss_conf 589918----98999999998
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.83 E-value=3.5e-20 Score=148.21 Aligned_cols=212 Identities=12% Similarity=0.124 Sum_probs=121.7
Q ss_pred CEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEE
Q ss_conf 40699998468999999321599999999997300399983999987999889999998539998898889965885588
Q 001705 747 QMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELY 826 (1024)
Q Consensus 747 ~rllvia~D~DgTl~~~~~~~~~~~~~~l~~l~~~~~~~gi~vviaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~i~ 826 (1024)
.+|++ +|+||||.++++.+++.+++++++++++ |+ ++++|||++..+...+..... ..+.++++++|+.++
T Consensus 3 ~kl~~--fDlDGTLl~~~~~i~~~~~~al~~l~~~----g~-~~i~Tgr~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 73 (243)
T d2amya1 3 PALCL--FDVDGTLTAPRQKITKEMDDFLQKLRQK----IK-IGVVGGSDFEKVQEQLGNDVV--EKYDYVFPENGLVAY 73 (243)
T ss_dssp SEEEE--EESBTTTBCTTSCCCHHHHHHHHHHTTT----SE-EEEECSSCHHHHHHHHCTTHH--HHCSEEESGGGTEEE
T ss_pred CEEEE--ECCCCCEECCCCCCCHHHHHHHHHHHCC----CC-EEEECCCCHHHHHHHHHHHCC--CCCEEEECCCEEEEE
T ss_conf 87999--8674782089994899999999999809----98-999958986886788765216--564299527479993
Q ss_pred CCCCCCCCCCCHHHHHCCCCCCHHHHHH----HHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCC-C-----------
Q ss_conf 2798654571001212024783228888----76532004898865324568899417999905997-5-----------
Q 001705 827 FPWRDMVADGDYEAHVEYRWPGENVRSV----VPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGA-E----------- 890 (1024)
Q Consensus 827 ~~~~~~~~d~~~~~~i~~~w~~~~i~~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------- 890 (1024)
.. +... +...+........+... .......... ...............+...... .
T Consensus 74 ~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (243)
T d2amya1 74 KD-GKLL----CRQNIQSHLGEALIQDLINYCLSYIAKIKLP---KKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELD 145 (243)
T ss_dssp ET-TEEE----EECCHHHHHCHHHHHHHHHHHHHHHHHCCCS---CCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHH
T ss_pred CC-CCCC----EECCHHHHHHHHHHHHHHHHHHHHHEECCCC---CCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf 38-8511----1000128888889888876400010001453---12220223101121122222235423301232110
Q ss_pred --HHHHHHHHHHHHH-C-CCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECC----CCCCCHHHHH
Q ss_conf --2559999999985-1-891799994399089994099998999999999939997878999089----9999968762
Q 001705 891 --TRKVDNIRQRLRM-R-GFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGE----KGDTDYEDLL 962 (1024)
Q Consensus 891 --~~~~~el~~~L~~-~-~~~~~v~~s~~~~~leV~P~~vSKg~ALr~L~~~~gi~~~~vvvfiGD----s~N~D~~~Ml 962 (1024)
.....+....+.. . .....+..+... ++||+|.++|||.||++|+ +++.+++++| || ++| | ++||
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lei~~~~vsKg~al~~l~---~~~~~ev~af-GD~~~~g~N-D-i~Ml 218 (243)
T d2amya1 146 KKENIRQKFVADLRKEFAGKGLTFSIGGQI-SFDVFPDGWDKRYCLRHVE---NDGYKTIYFF-GDKTMPGGN-D-HEIF 218 (243)
T ss_dssp HHHCHHHHHHHHHHHHTTTSCEEEEEETTT-EEEEEETTCSGGGGGGGTT---TSCCSEEEEE-ECSCC---C-C-CHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCCEEEEECCCC-CCEEECCCCCHHHHHHHHH---CCCCCEEEEE-CCCCCCCCC-C-HHHH
T ss_conf 010335899999998713455279952896-4155132167899999984---8993629998-689999997-6-9999
Q ss_pred CCCC-CEEEECCCCCCCHHHHHCCCC
Q ss_conf 2799-369944887899087863001
Q 001705 963 VGLH-KTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 963 ~~~~-~~vamg~~~~Na~~~l~~~a~ 987 (1024)
+.++ .+++|+ ++++.++.++
T Consensus 219 ~~~g~~~~~v~-----~~~~~~~~~~ 239 (243)
T d2amya1 219 TDPRTMGYSVT-----APEDTRRICE 239 (243)
T ss_dssp HCTTEEEEECS-----SHHHHHHHHH
T ss_pred HCCCCCEEEEC-----CHHHHHHHHH
T ss_conf 71597299907-----9999999999
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.51 E-value=2e-11 Score=90.14 Aligned_cols=82 Identities=18% Similarity=0.157 Sum_probs=63.3
Q ss_pred CCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCC--------CHHHHCCCCCE
Q ss_conf 9999778399999897999999723189399923898988899999998499699818887--------21113049858
Q 001705 543 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG--------PVDILKALNNG 614 (1024)
Q Consensus 543 ~l~~~V~~~g~~~~~el~~ly~~A~~~~Dv~v~ps~~Egfgl~llEAmA~G~PVIat~~Gg--------~~eii~~~~~G 614 (1024)
...++|.+.++++ ...++..+ |+||..+ -..++.||+++|+|+|+....+ ..+.+.....|
T Consensus 267 ~~~~~v~i~~~~p---~~~ll~~a----~~~v~hg----G~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g 335 (391)
T d1pn3a_ 267 DDGADCFVVGEVN---LQELFGRV----AAAIHHD----SAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVG 335 (391)
T ss_dssp SCCTTCCEESSCC---HHHHHTTS----SCEEEES----CHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSE
T ss_pred CCCCCEEEECCCC---HHHHHHHC----CEEEECC----CHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCE
T ss_conf 6889889954468---79998425----4898527----43799999982886899335567745299999999987988
Q ss_pred EEECCCC--HHHHHHHHHHHHHC
Q ss_conf 9939999--99999999999739
Q 001705 615 LLVDPHD--QNAIADALLKLLAD 635 (1024)
Q Consensus 615 llv~p~d--~~~la~aI~~ll~d 635 (1024)
+.++..+ +++++++|.+++++
T Consensus 336 ~~l~~~~~~~~~l~~~i~~~l~~ 358 (391)
T d1pn3a_ 336 VAVDGPVPTIDSLSAALDTALAP 358 (391)
T ss_dssp EEECCSSCCHHHHHHHHHHHTST
T ss_pred EECCCCCCCHHHHHHHHHHHHCH
T ss_conf 97685789999999999998399
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.48 E-value=5.7e-12 Score=93.71 Aligned_cols=111 Identities=15% Similarity=0.052 Sum_probs=75.2
Q ss_pred CCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCC----CHHHHCCCCCEEEEC
Q ss_conf 9999778399999897999999723189399923898988899999998499699818887----211130498589939
Q 001705 543 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG----PVDILKALNNGLLVD 618 (1024)
Q Consensus 543 ~l~~~V~~~g~~~~~el~~ly~~A~~~~Dv~v~ps~~Egfgl~llEAmA~G~PVIat~~Gg----~~eii~~~~~Gllv~ 618 (1024)
.+.++|.+.+++|+ .+++..+ |+||. .|...++.||+++|+|+|+....+ ..+.+.....|+.++
T Consensus 283 ~~~~~v~~~~~~p~---~~ll~~~----~~~I~----hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~ 351 (401)
T d1rrva_ 283 DDRDDCFAIDEVNF---QALFRRV----AAVIH----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHD 351 (401)
T ss_dssp CCCTTEEEESSCCH---HHHGGGS----SEEEE----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECS
T ss_pred CCCCCEEEEECCCC---HHHHHHC----CEEEE----CCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCEEECC
T ss_conf 57898899731481---7776212----48886----1772489999983999898066120899999999879889757
Q ss_pred CC--CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 99--99999999999973999999999999999960999999999999999836
Q 001705 619 PH--DQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSR 670 (1024)
Q Consensus 619 p~--d~~~la~aI~~ll~d~~~~~~~~~~a~~~~~~fsw~~~a~~~l~~l~~~~ 670 (1024)
.. +++.++++|.++++ ++. ++++++..+...- .-+.+-.+.+++.+
T Consensus 352 ~~~~~~~~L~~ai~~vl~-~~~----r~~a~~~~~~~~~-~g~~~aa~~ie~~~ 399 (401)
T d1rrva_ 352 GPTPTFESLSAALTTVLA-PET----RARAEAVAGMVLT-DGAAAAADLVLAAV 399 (401)
T ss_dssp SSCCCHHHHHHHHHHHTS-HHH----HHHHHHHTTTCCC-CHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHC-HHH----HHHHHHHHHHHHH-CCHHHHHHHHHHHH
T ss_conf 478999999999999849-799----9999999998755-17999999999985
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.41 E-value=2e-09 Score=76.82 Aligned_cols=329 Identities=14% Similarity=0.071 Sum_probs=171.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 88078999999999980799138999816778998776669875335799999997880999804899877644346773
Q 001705 194 TGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWP 273 (1024)
Q Consensus 194 ~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~lw~ 273 (1024)
+||+......|+++|.++| |+|.+++.... ...+.+ ...|..+..++.... .....+.
T Consensus 10 tGGHv~~a~al~~~L~~~G--~eV~~i~~~~~---------~~~~~~-------~~~~~~~~~~~~~~~----~~~~~~~ 67 (351)
T d1f0ka_ 10 TGGHVFPGLAVAHHLMAQG--WQVRWLGTADR---------MEADLV-------PKHGIEIDFIRISGL----RGKGIKA 67 (351)
T ss_dssp SHHHHHHHHHHHHHHHTTT--CEEEEEECTTS---------THHHHG-------GGGTCEEEECCCCCC----TTCCHHH
T ss_pred CHHHHHHHHHHHHHHHHCC--CEEEEEEECCC---------CHHHCC-------CCCCCCEEEEECCCC----CCCCHHH
T ss_conf 5898999999999998589--98999995883---------243223-------504995799978886----7777799
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCC
Q ss_conf 14899999999999999998754149999963499976987479999998029997999957996003699873199970
Q 001705 274 YIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPK 353 (1024)
Q Consensus 274 ~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~ 353 (1024)
.+.. ..............+.+ .+||++..-.......+...+..+++|++...++......
T Consensus 68 ~~~~-~~~~~~~~~~~~~i~~~-------~~~~~~~~~~~~~~~~~~~~a~~~~ip~~~~~~~~~~~~~----------- 128 (351)
T d1f0ka_ 68 LIAA-PLRIFNAWRQARAIMKA-------YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAGLT----------- 128 (351)
T ss_dssp HHTC-HHHHHHHHHHHHHHHHH-------HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSSCCHH-----------
T ss_pred HHHH-HHHHHHHHHHHHHHHHC-------CCCCEEEECCCCHHHHHHHHHHHCCCCEEECCCCCCCCHH-----------
T ss_conf 9999-98877767777887631-------3443001103221134454554056434632221231046-----------
Q ss_pred CHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCC
Q ss_conf 03368999998999997311179899279899999970026862678999998540474345888996899599998999
Q 001705 354 DINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSY 433 (1024)
Q Consensus 354 ~i~~~y~~~~~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~l~~~f~~~~~~~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~ 433 (1024)
.......++.+....... . .....+.+......
T Consensus 129 --------------~~~~~~~~~~~~~~~~~~--------~-------------------------~~~~~~~~~~~~~~ 161 (351)
T d1f0ka_ 129 --------------NKWLAKIATKVMQAFPGA--------F-------------------------PNAEVVGNPVRTDV 161 (351)
T ss_dssp --------------HHHHTTTCSEEEESSTTS--------S-------------------------SSCEECCCCCCHHH
T ss_pred --------------HHHHHHHCCEEECCCCCC--------C-------------------------CCEEEECCCCCCCC
T ss_conf --------------777654134011023566--------5-------------------------30038767764310
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCH-HHHHHHHHHCCCCCCCCCEE
Q ss_conf 64468989983110012576545557998305887532079999589998389987899-99999994141557998399
Q 001705 434 VTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNV-TTLLKAFGECQPLRELANMT 512 (1024)
Q Consensus 434 f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi-~~ll~A~~~l~~l~~~~~l~ 512 (1024)
+. .+. ...+.....+...++.+|.-.....+ ..+.+.+..+.. ....
T Consensus 162 ~~-------------------------~~~---~~~~~~~~~~~~~i~~~~gs~g~~~~~~~~~~~~~~l~~----~~~~ 209 (351)
T d1f0ka_ 162 LA-------------------------LPL---PQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGD----SVTI 209 (351)
T ss_dssp HT-------------------------SCC---HHHHHTTCCSSEEEEEECTTTCCHHHHHHHHHHHHHHGG----GEEE
T ss_pred CC-------------------------CHH---HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC----CCEE
T ss_conf 00-------------------------005---776532035874313344540134668888876665245----5304
Q ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHC
Q ss_conf 99915999300013315899999999987199997783999998979999997231893999238989888999999984
Q 001705 513 LILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAY 592 (1024)
Q Consensus 513 LIiG~~~~~~~l~~~~~~~~~~i~~li~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~Dv~v~ps~~Egfgl~llEAmA~ 592 (1024)
++++..... ......... ....++...++ .+++.+++..| |++|.- +-+.++.|++++
T Consensus 210 i~~~~~~~~----------~~~~~~~~~--~~~~~~~v~~f--~~~~~~lm~~a----dl~It~----~G~~T~~Eal~~ 267 (351)
T d1f0ka_ 210 WHQSGKGSQ----------QSVEQAYAE--AGQPQHKVTEF--IDDMAAAYAWA----DVVVCR----SGALTVSEIAAA 267 (351)
T ss_dssp EEECCTTCH----------HHHHHHHHH--TTCTTSEEESC--CSCHHHHHHHC----SEEEEC----CCHHHHHHHHHH
T ss_pred EEECCCCCH----------HHHHHHHCC--CCCCCCEEEEE--HHHHHHHHHHC----CHHHCC----CCCHHHHHHHHH
T ss_conf 542134104----------443343202--33223155543--05589999747----422205----542377888871
Q ss_pred CCCEEECCCCC---C----HHHHCCCCCEEEECCC--CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 99699818887---2----1113049858993999--9999999999997399999999999999996099999999999
Q 001705 593 GLPVVATKNGG---P----VDILKALNNGLLVDPH--DQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYL 663 (1024)
Q Consensus 593 G~PVIat~~Gg---~----~eii~~~~~Gllv~p~--d~~~la~aI~~ll~d~~~~~~~~~~a~~~~~~fsw~~~a~~~l 663 (1024)
|+|+|...... - ++.+...+.|+.++.. +.+.+.++|..+ +++...+|++++++......+...++..+
T Consensus 268 g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~~~~~~~~e~l~~~l~~l--~~~~~~~~~~~~~~~~~~~~a~~i~~~i~ 345 (351)
T d1f0ka_ 268 GLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW--SRETLLTMAERARAASIPDATERVANEVS 345 (351)
T ss_dssp TCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC--CHHHHHHHHHHHHHTCCTTHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECHHHCCHHHHHHHHHHH--CHHHHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 7854654154677669999999998899899223319999999999863--99999999999872699569999999999
Q ss_pred HHH
Q ss_conf 999
Q 001705 664 SHV 666 (1024)
Q Consensus 664 ~~l 666 (1024)
++.
T Consensus 346 ~l~ 348 (351)
T d1f0ka_ 346 RVA 348 (351)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 998
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.39 E-value=4.8e-10 Score=80.93 Aligned_cols=152 Identities=16% Similarity=0.058 Sum_probs=90.4
Q ss_pred CCCCEEEEEECCC-CCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCC
Q ss_conf 9995899983899-878999999999414155799839999915999300013315899999999987199997783999
Q 001705 475 PHKPTILALSRPD-PKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKH 553 (1024)
Q Consensus 475 ~~~~~Il~vgRld-~~Kgi~~ll~A~~~l~~l~~~~~l~LIiG~~~~~~~l~~~~~~~~~~i~~li~~~~l~~~V~~~g~ 553 (1024)
....++++.|... ..+....+++++..+. ....++.+.... ......+++.+.++
T Consensus 237 ~~~~i~~~~~~~~~~~~~~~~~~~al~~~~-----~~~~~~~~~~~~-------------------~~~~~~~nv~~~~~ 292 (401)
T d1iira_ 237 GPPPVYLGFGSLGAPADAVRVAIDAIRAHG-----RRVILSRGWADL-------------------VLPDDGADCFAIGE 292 (401)
T ss_dssp SSCCEEEECC---CCHHHHHHHHHHHHHTT-----CCEEECTTCTTC-------------------CCSSCGGGEEECSS
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHCC-----CEEEEECCCCCC-------------------CCCCCCCCEEEEEC
T ss_conf 897599715754665689999999999769-----807984267764-------------------23357897899702
Q ss_pred CCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCC----CHHHHCCCCCEEEECCC--CHHHHHH
Q ss_conf 99897999999723189399923898988899999998499699818887----21113049858993999--9999999
Q 001705 554 HKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG----PVDILKALNNGLLVDPH--DQNAIAD 627 (1024)
Q Consensus 554 ~~~~el~~ly~~A~~~~Dv~v~ps~~Egfgl~llEAmA~G~PVIat~~Gg----~~eii~~~~~Gllv~p~--d~~~la~ 627 (1024)
+++ .++|..+ |+||. .|...++.|++++|+|+|+-...+ ....+.....|+.++.. +++++++
T Consensus 293 ~p~---~~~l~~~----~~~V~----hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~~~~~~l~~ 361 (401)
T d1iira_ 293 VNH---QVLFGRV----AAVIH----HGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSA 361 (401)
T ss_dssp CCH---HHHGGGS----SEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHH
T ss_pred CCH---HHHHHHC----CEEEE----CCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHH
T ss_conf 587---9999545----89996----377169999998199999806614179999999987988876847899999999
Q ss_pred HHHHHHHCHHHHHHHHHHHHHHHH---CCCHHHHHHHHHHHH
Q ss_conf 999997399999999999999996---099999999999999
Q 001705 628 ALLKLLADKNMWSECRKNGLKNIH---RFSWPEHCRNYLSHV 666 (1024)
Q Consensus 628 aI~~ll~d~~~~~~~~~~a~~~~~---~fsw~~~a~~~l~~l 666 (1024)
+|.++++ ++. ++++++..+ ...-..-++.+++.+
T Consensus 362 ai~~~l~-~~~----~~~a~~~~~~~~~~~~~~aa~~i~~~i 398 (401)
T d1iira_ 362 ALATALT-PET----HARATAVAGTIRTDGAAVAARLLLDAV 398 (401)
T ss_dssp HHHHHTS-HHH----HHHHHHHHHHSCSCHHHHHHHHHHHHH
T ss_pred HHHHHHC-HHH----HHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 9999969-799----999999999987508399999999998
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.35 E-value=6.4e-13 Score=100.00 Aligned_cols=79 Identities=13% Similarity=0.098 Sum_probs=62.9
Q ss_pred EEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCCCCC
Q ss_conf 99940999989999999999399978789990899999968762279936994488789908786300138877745789
Q 001705 919 LNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPD 998 (1024)
Q Consensus 919 leV~P~~vSKg~ALr~L~~~~gi~~~~vvvfiGDs~N~D~~~Ml~~~~~~vamg~~~~Na~~~l~~~a~~~~~~~v~~~~ 998 (1024)
....+...+|+...+.++..++++.+++++| ||+.| | ++||+.+|.||||+ +..+..+++++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~i~~~eviai-GDg~N-D-i~Ml~~Ag~gIAmn----a~~~v~~~~~~----------- 182 (206)
T d1rkua_ 121 DRVVGYQLRQKDPKRQSVIAFKSLYYRVIAA-GDSYN-D-TTMLSEAHAGILFH----APENVIREFPQ----------- 182 (206)
T ss_dssp SCEEEEECCSSSHHHHHHHHHHHTTCEEEEE-ECSST-T-HHHHHHSSEEEEES----CCHHHHHHCTT-----------
T ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCCCEEEE-CCCCC-C-HHHHHHCCCCEEEC----CCHHHHHHCCC-----------
T ss_conf 4454321120145788999864256521884-38732-7-99998589409978----97799986789-----------
Q ss_pred CCCEEEECCCCCHHHHHHHHHHC
Q ss_conf 99926822556825799998860
Q 001705 999 SPNIAYIEESYEPQDLSAALKAI 1021 (1024)
Q Consensus 999 ~~~~~~~~~~~~~~gi~~al~~~ 1021 (1024)
|+ .....+++..+|.+.
T Consensus 183 -----~~-~~~~~~d~~~~~~~~ 199 (206)
T d1rkua_ 183 -----FP-AVHTYEDLKREFLKA 199 (206)
T ss_dssp -----SC-EECSHHHHHHHHHHH
T ss_pred -----CE-EECCHHHHHHHHHHH
T ss_conf -----55-626889999999997
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=99.12 E-value=3.3e-07 Score=62.06 Aligned_cols=297 Identities=13% Similarity=0.071 Sum_probs=155.0
Q ss_pred CCEEEEECCCCHHHHHH-HHHCC--------------CCCCEEEEECCCCHHH---HHHHHHCCCCCCCHHHHHHHHHH-
Q ss_conf 63499976987479999-99802--------------9997999957996003---69987319997003368999998-
Q 001705 304 WPYVIHGHYADAGEVAA-HLSGA--------------LNVPMVLTGHSLGRNK---FEQLLKQGRLPKDINASYKIMRR- 364 (1024)
Q Consensus 304 ~pDvIh~h~~~~~~~a~-~l~~~--------------~~ipiV~t~H~l~~~~---~~~l~~~g~~~~~i~~~y~~~~~- 364 (1024)
.++++|.+..+++++.. +++.. ....++||.|..-+.- ++.-+-...+.......+.+-.+
T Consensus 299 ~~~vihlNEgHpafai~El~R~l~d~~gl~~~~A~e~vr~~~~fTtHTpvpag~e~fp~~li~~~l~~~~~~i~~i~~~f 378 (796)
T d1l5wa_ 299 DYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRF 378 (796)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCEEEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 03546503622777899999999872289899999975251787415786453266279999998388987776765999
Q ss_pred -------------------------HHHHHHHHHCCCEEEECCHHHHHHHHHCC-CCCCHHHHHHHHHHHHCCCCCCCCC
Q ss_conf -------------------------99999731117989927989999997002-6862678999998540474345888
Q 001705 365 -------------------------IEAEELGLDASEMVVTSTRQEIEMQWGLY-DGFDLKLERKLRVRRQRGVSCFGRF 418 (1024)
Q Consensus 365 -------------------------i~~e~~~l~~Ad~Vi~~S~~~~~~~~~l~-~~f~~~~~~~l~~~~~~g~~~~g~~ 418 (1024)
+.+-.+++..+..+-.+|+...+-..+.. +.|.+ ..
T Consensus 379 l~~~~~~~~~d~~~~~~~~~~~~~~~~Ma~LAl~~S~~vNGVSklH~ev~~~~~~~~~~~------------------~~ 440 (796)
T d1l5wa_ 379 KTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQ------------------LW 440 (796)
T ss_dssp HHHHHHHSTTCHHHHHHHCSEETTEEEHHHHHHHHSSEEEESSHHHHHHHHHTTSHHHHH------------------HC
T ss_pred HHHHHHHCCCCHHHHHHHCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC------------------CC
T ss_conf 999998789958888520221066632699999860466799999999999875331255------------------68
Q ss_pred CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC------CCCC---CCCCCCCCHH------------------HHHHH
Q ss_conf 9968995999989996446898998311001257------6545---5579983058------------------87532
Q 001705 419 MPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGN------DRTQ---SKRNLPPMWS------------------EVMRF 471 (1024)
Q Consensus 419 ~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~------~~~~---~~~~~p~~~~------------------~~~~~ 471 (1024)
..++.-|.|||....+.....++....+.+.++. +.+. .-...+..+. .....
T Consensus 441 p~~i~~ITNGVh~~~Wl~~~n~~L~~l~~~~ig~~w~~~~~~l~~~~~~~~d~~~~~~l~~~k~~~K~~L~~~i~~~~g~ 520 (796)
T d1l5wa_ 441 PNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGI 520 (796)
T ss_dssp GGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 76643445661577887432789999987645652134778899888636879999999999999999999999985296
Q ss_pred HCCCCCCEEEEEECCCCCCCHHHHHHHH----HHCCCCC--CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCC--
Q ss_conf 0799995899983899878999999999----4141557--9983999991599930001331589999999998719--
Q 001705 472 FTNPHKPTILALSRPDPKKNVTTLLKAF----GECQPLR--ELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYD-- 543 (1024)
Q Consensus 472 ~~~~~~~~Il~vgRld~~Kgi~~ll~A~----~~l~~l~--~~~~l~LIiG~~~~~~~l~~~~~~~~~~i~~li~~~~-- 543 (1024)
..+|+..+++++-|+..+|...+++.-. ..+.... +....++|.++....... .....+..|..+.+..+
T Consensus 521 ~ldp~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d~--~gK~iIk~I~~va~~in~d 598 (796)
T d1l5wa_ 521 EINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYY--LAKNIIFAINKVADVINND 598 (796)
T ss_dssp CCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCH--HHHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHH--HHHHHHHHHHHHHHHHCCC
T ss_conf 35856514034345444314530353599999998508645778659997488898317--8999999999999986178
Q ss_pred --C--CCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCC--CCCCCHHHHHHHHCCCCEEECCCCCCHHHHCC--CCCEE
Q ss_conf --9--9977839999989799999972318939992389--89888999999984996998188872111304--98589
Q 001705 544 --L--YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAL--VEPFGLTIIEAAAYGLPVVATKNGGPVDILKA--LNNGL 615 (1024)
Q Consensus 544 --l--~~~V~~~g~~~~~el~~ly~~A~~~~Dv~v~ps~--~Egfgl~llEAmA~G~PVIat~~Gg~~eii~~--~~~Gl 615 (1024)
. ..+|.|+.-.+-+--..++..| ||-++.|. .|..|..-+-||.-|.+.+++..|+..|+.++ ++|||
T Consensus 599 p~~~~~~kVVFlenYdv~lA~~lv~g~----DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE~~~~vg~eN~f 674 (796)
T d1l5wa_ 599 PLVGDKLKVVFLPDYCVSAAEKLIPAA----DISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIF 674 (796)
T ss_dssp TTTGGGEEEEECSSCCHHHHHHHGGGC----SEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSE
T ss_pred HHHCCCEEEEEECCCCHHHHHHHHCCC----CHHHHCCCCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCEE
T ss_conf 554363338980787568999874401----2654099987345782677999859716604664479888863745368
Q ss_pred EECCCCHHHH
Q ss_conf 9399999999
Q 001705 616 LVDPHDQNAI 625 (1024)
Q Consensus 616 lv~p~d~~~l 625 (1024)
.+-. +.+++
T Consensus 675 ~fG~-~~~ev 683 (796)
T d1l5wa_ 675 IFGH-TVEQV 683 (796)
T ss_dssp ECSC-CHHHH
T ss_pred EECC-CHHHH
T ss_conf 8068-66777
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=98.94 E-value=8.5e-07 Score=59.35 Aligned_cols=83 Identities=18% Similarity=0.168 Sum_probs=56.4
Q ss_pred CCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCC----HH-HHCCCCCEEEECC
Q ss_conf 997783999998979999997231893999238989888999999984996998188872----11-1304985899399
Q 001705 545 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----VD-ILKALNNGLLVDP 619 (1024)
Q Consensus 545 ~~~V~~~g~~~~~el~~ly~~A~~~~Dv~v~ps~~Egfgl~llEAmA~G~PVIat~~Gg~----~e-ii~~~~~Gllv~p 619 (1024)
.+++.+..+.++.++. .+..+ ++||. -|-..++.||+++|+|+|+....+= .. +++....|+.++.
T Consensus 329 ~~n~~v~~~~pq~~~l-~~p~~----~~fIt----HGG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~ 399 (461)
T d2acva1 329 EGKGMICGWAPQVEVL-AHKAI----GGFVS----HCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRV 399 (461)
T ss_dssp HCSEEEESSCCHHHHH-HSTTE----EEEEE----CCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCS
T ss_pred CCCEEEEECCCHHHHH-HCCCC----CEEEE----CCCCCHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCEEEEEC
T ss_conf 7873898518778888-55657----77983----388448999998599989677600028899999998493678415
Q ss_pred --------CCHHHHHHHHHHHHHCH
Q ss_conf --------99999999999997399
Q 001705 620 --------HDQNAIADALLKLLADK 636 (1024)
Q Consensus 620 --------~d~~~la~aI~~ll~d~ 636 (1024)
-+.++++++|.++++++
T Consensus 400 ~~~~~~~~~t~~~l~~a~~~vl~~d 424 (461)
T d2acva1 400 DYRKGSDVVAAEEIEKGLKDLMDKD 424 (461)
T ss_dssp SCCTTCCCCCHHHHHHHHHHHTCTT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 3113678547999999999996088
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=98.91 E-value=2.1e-06 Score=56.69 Aligned_cols=94 Identities=11% Similarity=0.135 Sum_probs=67.1
Q ss_pred CCCEEECCCCCCCCHHHHH--HHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCC-CHH---HH-CCCCCEEEE
Q ss_conf 9977839999989799999--9723189399923898988899999998499699818887-211---13-049858993
Q 001705 545 YGQVAYPKHHKQSDVPDIY--RLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG-PVD---IL-KALNNGLLV 617 (1024)
Q Consensus 545 ~~~V~~~g~~~~~el~~ly--~~A~~~~Dv~v~ps~~Egfgl~llEAmA~G~PVIat~~Gg-~~e---ii-~~~~~Gllv 617 (1024)
.++|.+..++|+. +++ ..+ ++||. -|-..++.||+.+|+|+|+....+ -.+ .+ +....|+.+
T Consensus 345 ~~Nv~~~~~~Pq~---~lL~hp~~----~~fIt----HGG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l 413 (473)
T d2pq6a1 345 ADRGLIASWCPQD---KVLNHPSI----GGFLT----HCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEI 413 (473)
T ss_dssp TTTEEEESCCCHH---HHHTSTTE----EEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC
T ss_pred CCCEEEEEECCHH---HHHCCCCC----CEEEE----CCCCCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCEEEEE
T ss_conf 4766886308879---99647767----59995----6884089999985999896564112188999999971737861
Q ss_pred CCC-CHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q ss_conf 999-999999999999739999999999999999
Q 001705 618 DPH-DQNAIADALLKLLADKNMWSECRKNGLKNI 650 (1024)
Q Consensus 618 ~p~-d~~~la~aI~~ll~d~~~~~~~~~~a~~~~ 650 (1024)
+.. +.++++++|.+++.|+. .+++++++.+..
T Consensus 414 ~~~~t~~~l~~ai~~vl~d~~-~~~~r~~a~~l~ 446 (473)
T d2pq6a1 414 DTNVKREELAKLINEVIAGDK-GKKMKQKAMELK 446 (473)
T ss_dssp CSSCCHHHHHHHHHHHHTSHH-HHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHCCCH-HHHHHHHHHHHH
T ss_conf 897389999999999976976-899999999999
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.88 E-value=2.5e-06 Score=56.21 Aligned_cols=259 Identities=16% Similarity=0.056 Sum_probs=155.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEECCC-CHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCC-CHHHHHHH
Q ss_conf 999999999875414999996349997698-7479999998029997999957996003699873199970-03368999
Q 001705 284 NHIVNMARAIGEQVNGGKPTWPYVIHGHYA-DAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPK-DINASYKI 361 (1024)
Q Consensus 284 ~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~-~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~-~i~~~y~~ 361 (1024)
.....+.+.+.+ .+||+|.++.- ...+.++..+...++|+++..-+.- .|.... .+.. .
T Consensus 75 ~~~~~~~~~l~~-------~kPD~vlv~GDr~e~la~a~aa~~~~ipi~HiegG~r---------sg~~~~~~~de---~ 135 (373)
T d1v4va_ 75 RILPQAARALKE-------MGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLR---------SGNLKEPFPEE---A 135 (373)
T ss_dssp HHHHHHHHHHHH-------TTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCC---------CSCTTSSTTHH---H
T ss_pred HHHHHHHHHHHH-------CCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCC---------CCCCCCCCCHH---H
T ss_conf 999987666640-------3764001113675310377889876212224134345---------54335676166---6
Q ss_pred HHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC-CCCCCCCCCCCC
Q ss_conf 9989999973111798992798999999700268626789999985404743458889968995999-989996446898
Q 001705 362 MRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPG-MDFSYVTTQDTM 440 (1024)
Q Consensus 362 ~~~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~l~~~f~~~~~~~l~~~~~~g~~~~g~~~~ki~VIPnG-iD~~~f~~~~~~ 440 (1024)
.|. .+-+.|+..+|+|+...+.+.+.. ..+ .++.++-+. +|. +...
T Consensus 136 ~R~-----~iskls~~hf~~t~~~~~~L~~~G--e~~---------------------~~I~~vG~p~~D~--i~~~--- 182 (373)
T d1v4va_ 136 NRR-----LTDVLTDLDFAPTPLAKANLLKEG--KRE---------------------EGILVTGQTGVDA--VLLA--- 182 (373)
T ss_dssp HHH-----HHHHHCSEEEESSHHHHHHHHTTT--CCG---------------------GGEEECCCHHHHH--HHHH---
T ss_pred HHH-----HHCCCCCEEEECCHHHHHHHHHHC--CCC---------------------CCEEECCCCHHHH--HHHH---
T ss_conf 665-----522344325512215666666630--454---------------------2134426621557--7765---
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHH--HHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECC
Q ss_conf 99831100125765455579983058875--3207999958999838998789999999994141557998399999159
Q 001705 441 GGDTDLKSLIGNDRTQSKRNLPPMWSEVM--RFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNR 518 (1024)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIiG~~ 518 (1024)
.... ......+...++..-|....++...+.+++..+.... .++.++.-..
T Consensus 183 -------------------------~~~~~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~--~~~~~i~p~~ 235 (373)
T d1v4va_ 183 -------------------------AKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVAEAF--PHLTFVYPVH 235 (373)
T ss_dssp -------------------------HHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHC--TTSEEEEECC
T ss_pred -------------------------HHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHC--CCCEEEEEEC
T ss_conf -------------------------4311000223445531688426555312789999999986533--5650356403
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEE
Q ss_conf 99300013315899999999987199997783999998979999997231893999238989888999999984996998
Q 001705 519 DDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVA 598 (1024)
Q Consensus 519 ~~~~~l~~~~~~~~~~i~~li~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~Dv~v~ps~~Egfgl~llEAmA~G~PVIa 598 (1024)
+. ...... ..+......++.+...+++.+...+++.| ++++-- .|-...||.++|+|+|.
T Consensus 236 ~~--------~~~~~~---~~~~~~~~~n~~~~~~l~~~~~l~ll~~s----~~vign-----Sssgi~Ea~~lg~P~In 295 (373)
T d1v4va_ 236 LN--------PVVREA---VFPVLKGVRNFVLLDPLEYGSMAALMRAS----LLLVTD-----SGGLQEEGAALGVPVVV 295 (373)
T ss_dssp SC--------HHHHHH---HHHHHTTCTTEEEECCCCHHHHHHHHHTE----EEEEES-----CHHHHHHHHHTTCCEEE
T ss_pred CC--------CCCHHH---HHHHHCCCCCCEEECCCHHHHHHHHHHHC----EEEECC-----CCHHHHCCHHHCCCEEE
T ss_conf 42--------221035---55543033320011100078888876430----168506-----41222200320586898
Q ss_pred CC-CCCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCHHHHHHHH
Q ss_conf 18-8872111304985899399999999999999973999999999
Q 001705 599 TK-NGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECR 643 (1024)
Q Consensus 599 t~-~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~ 643 (1024)
-+ .|.-++-++.+.+ +++. .|.+++..++.+++.++..+.++.
T Consensus 296 ir~~~eRqeg~~~g~n-vlv~-~d~~~I~~~i~~~l~~~~~~~~~~ 339 (373)
T d1v4va_ 296 LRNVTERPEGLKAGIL-KLAG-TDPEGVYRVVKGLLENPEELSRMR 339 (373)
T ss_dssp CSSSCSCHHHHHHTSE-EECC-SCHHHHHHHHHHHHTCHHHHHHHH
T ss_pred ECCCCCCHHHHHCCEE-EECC-CCHHHHHHHHHHHHCCHHHHHHCC
T ss_conf 4887669878962904-9758-999999999999971989886402
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.86 E-value=3.2e-06 Score=55.57 Aligned_cols=227 Identities=13% Similarity=0.058 Sum_probs=127.8
Q ss_pred HHHHHCCCEEEECCHHHHHHHHHCC-CCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9731117989927989999997002-686267899999854047434588899689959999899964468989983110
Q 001705 369 ELGLDASEMVVTSTRQEIEMQWGLY-DGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLK 447 (1024)
Q Consensus 369 ~~~l~~Ad~Vi~~S~~~~~~~~~l~-~~f~~~~~~~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~ 447 (1024)
.+++..+..|-.+|+...+-..... ..|-. ....++.-|.|||....+.....+.....+.
T Consensus 432 ~Lal~~S~~vNGVSklH~ev~~~~~~~~~~~------------------~~p~ki~~iTNGV~~rrWl~~~np~L~~l~~ 493 (824)
T d2gj4a1 432 HLCIAGSHAVNGVARIHSEILKKTIFKDFYE------------------LEPHKFQNKTNGITPRRWLVLCNPGLAEIIA 493 (824)
T ss_dssp HHHHHTCSCEEESSHHHHHHHHHTTTHHHHH------------------HCGGGEEECCCCBCTCCCCCCTCHHHHHHHH
T ss_pred HHHHHHCHHHHHHHHHHHHHHHHHHCCCCCC------------------CCCCCEECCCCCCCCCCCHHCCCHHHHHHHH
T ss_conf 9999864267889999999999764356566------------------7872402664751576113116977999877
Q ss_pred CCCCC------CCC---CCCCCCCCCH---------------HHHH---HHHCCCCCCEEEEEECCCCCCCHHHHH----
Q ss_conf 01257------654---5557998305---------------8875---320799995899983899878999999----
Q 001705 448 SLIGN------DRT---QSKRNLPPMW---------------SEVM---RFFTNPHKPTILALSRPDPKKNVTTLL---- 496 (1024)
Q Consensus 448 ~~~~~------~~~---~~~~~~p~~~---------------~~~~---~~~~~~~~~~Il~vgRld~~Kgi~~ll---- 496 (1024)
+.++. +.+ ..-.+.+..+ +.+. ....+|+..+++++-|+..+|...+.+
T Consensus 494 ~~ig~~w~~d~~~l~~l~~~~~d~~~~~~~~~~k~~~K~~L~~~i~~~~g~~ldp~~lfd~~arRfheYKRq~Ln~~~i~ 573 (824)
T d2gj4a1 494 ERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVI 573 (824)
T ss_dssp HHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHH
T ss_pred HHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEECHHHHHHHHHHHHHH
T ss_conf 54344322598999998873898999999999999828999999999838778964110131000023333456676589
Q ss_pred HHHHHCCCCC--CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCC------CCEEECCCCCCCCHHHHHHHHHC
Q ss_conf 9994141557--998399999159993000133158999999999871999------97783999998979999997231
Q 001705 497 KAFGECQPLR--ELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLY------GQVAYPKHHKQSDVPDIYRLAAK 568 (1024)
Q Consensus 497 ~A~~~l~~l~--~~~~l~LIiG~~~~~~~l~~~~~~~~~~i~~li~~~~l~------~~V~~~g~~~~~el~~ly~~A~~ 568 (1024)
.-+.+++... .....++|.|+....... .....+..|..+.+..+.. .+|.|+.-.+-+--..++..|
T Consensus 574 ~ly~rlk~~~~~~~~P~q~IFaGKAhP~d~--~gK~iIk~I~~va~~in~dp~~~~~lkVvFlenY~v~lA~~li~g~-- 649 (824)
T d2gj4a1 574 TLYNRIKKEPNKFVVPRTVMIGGKAAPGYH--MAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAA-- 649 (824)
T ss_dssp HHHHHHHHCTTSCCCCEEEEEECCCCTTCH--HHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGC--
T ss_pred HHHHHHHHCCCCCCCCEEEEEECCCCCCCH--HHHHHHHHHHHHHHHHHCCHHHCCCEEEEECCCCCHHHHHHHHHHH--
T ss_conf 999876534567888749998078897638--8999999999999987418112153448870787669999751143--
Q ss_pred CCCEEEECCC--CCCCCHHHHHHHHCCCCEEECCCCCCHHHHCC--CCCEEEECC
Q ss_conf 8939992389--89888999999984996998188872111304--985899399
Q 001705 569 TKGVFINPAL--VEPFGLTIIEAAAYGLPVVATKNGGPVDILKA--LNNGLLVDP 619 (1024)
Q Consensus 569 ~~Dv~v~ps~--~Egfgl~llEAmA~G~PVIat~~Gg~~eii~~--~~~Gllv~p 619 (1024)
||.++.|. .|..|..-+-+|.-|.+.++|..|+-.|+.+. +.||+.+-.
T Consensus 650 --Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnvEi~~~vg~~N~~~fG~ 702 (824)
T d2gj4a1 650 --DLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGM 702 (824)
T ss_dssp --SEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSC
T ss_pred --HHHHCCCCCCCCCCCCCHHHHHHCCCEEECCCCCHHHHHHHHCCCCCEEEECC
T ss_conf --44131899973457750458997598356356635899998647566798179
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.82 E-value=6e-09 Score=73.65 Aligned_cols=80 Identities=9% Similarity=0.002 Sum_probs=70.8
Q ss_pred EEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCCCCC
Q ss_conf 99940999989999999999399978789990899999968762279936994488789908786300138877745789
Q 001705 919 LNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPD 998 (1024)
Q Consensus 919 leV~P~~vSKg~ALr~L~~~~gi~~~~vvvfiGDs~N~D~~~Ml~~~~~~vamg~~~~Na~~~l~~~a~~~~~~~v~~~~ 998 (1024)
.++.....+|..+++.++++++++.++++.+ ||+.| | ++||+.++.++||+ ||+++++..|+
T Consensus 72 ~~~~~~~~~K~~~l~~~~~~~~i~~~~v~~v-GDd~n-D-l~~l~~~g~siap~----nA~~~vk~~A~----------- 133 (177)
T d1k1ea_ 72 KLFFLGKLEKETACFDLMKQAGVTAEQTAYI-GDDSV-D-LPAFAACGTSFAVA----DAPIYVKNAVD----------- 133 (177)
T ss_dssp CEEEESCSCHHHHHHHHHHHHTCCGGGEEEE-ECSGG-G-HHHHHHSSEEEECT----TSCHHHHTTSS-----------
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCEEEEE-CCCCC-H-HHHHHHCCEEEECC----CCCHHHHHHCC-----------
T ss_conf 2011013638889999999866775225770-58840-7-89996689289848----86499998589-----------
Q ss_pred CCCEEEECCCCCHHH-HHHHHHHC
Q ss_conf 999268225568257-99998860
Q 001705 999 SPNIAYIEESYEPQD-LSAALKAI 1021 (1024)
Q Consensus 999 ~~~~~~~~~~~~~~g-i~~al~~~ 1021 (1024)
||+....-+| |+++++.+
T Consensus 134 -----~Vt~~~GG~GavrE~~e~i 152 (177)
T d1k1ea_ 134 -----HVLSTHGGKGAFREMSDMI 152 (177)
T ss_dssp -----EECSSCTTTTHHHHHHHHH
T ss_pred -----EEECCCCCCCHHHHHHHHH
T ss_conf -----9917889976399999999
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=98.79 E-value=9.1e-07 Score=59.16 Aligned_cols=333 Identities=12% Similarity=0.067 Sum_probs=176.4
Q ss_pred CCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCC-CCCCCCCCC
Q ss_conf 8618999931454345777779989888078999999999980799138999816778998776669875-335799999
Q 001705 168 RNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPN-EMLSCPSDG 246 (1024)
Q Consensus 168 ~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~-e~l~~~~~~ 246 (1024)
++|||++|+-- . ..---...|.++|.+.++ .++.++....+.. ..... ..+
T Consensus 1 ~k~Ki~~v~Gt------R----------~e~~kl~pli~~l~~~~~-~~~~li~tG~H~~-----~~~~~~~~~------ 52 (377)
T d1o6ca_ 1 KKLKVMTVFGT------R----------PEAIKMAPLVLELKKYPE-IDSYVTVTAQHRQ-----MLDQVLDAF------ 52 (377)
T ss_dssp CCEEEEEEECS------H----------HHHHHHHHHHHHGGGCTT-EEEEEEECCSCGG-----GTHHHHHHT------
T ss_pred CCCEEEEEEEC------H----------HHHHHHHHHHHHHHHCCC-CCEEEEEECCCHH-----HHHHHHHHC------
T ss_conf 98469999970------5----------859999999999971899-9879999379889-----999998516------
Q ss_pred CCCCCEE-EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC-CHHHHHHHHHC
Q ss_conf 9978809-998048998776443467731489999999999999999875414999996349997698-74799999980
Q 001705 247 TGSCGAY-IIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYA-DAGEVAAHLSG 324 (1024)
Q Consensus 247 ~~~~gv~-i~rip~~~~~~~~~k~~lw~~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~-~~~~~a~~l~~ 324 (1024)
++. -+.+..... .- ......-.....+.+.+.+ .+||+|.++.- ...+.++..+.
T Consensus 53 ----~i~~~~~~~~~~~-------~~-----~~~~~~~~~i~~~~~~~~~-------~kpD~v~v~GDr~e~la~a~aa~ 109 (377)
T d1o6ca_ 53 ----HIKPDFDLNIMKE-------RQ-----TLAEITSNALVRLDELFKD-------IKPDIVLVHGDTTTTFAGSLAAF 109 (377)
T ss_dssp ----TCCCSEECCCCCT-------TC-----CHHHHHHHHHHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHHH
T ss_pred ----CCCCCEEEECCCC-------CC-----CHHHHHHHHHHHHHHHHHH-------CCCCEEEEEECCCCCCHHHHHHH
T ss_conf ----8777535443889-------98-----8999999999850566653-------36653676403454301566653
Q ss_pred CCCCCEEEEECCCCHHHHHHHHHCCCCCCCHH--HHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCHHHHH
Q ss_conf 29997999957996003699873199970033--6899999899999731117989927989999997002686267899
Q 001705 325 ALNVPMVLTGHSLGRNKFEQLLKQGRLPKDIN--ASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLER 402 (1024)
Q Consensus 325 ~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~--~~y~~~~~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~l~~~f~~~~~~ 402 (1024)
..++|+++.--+. .+..+. ..-...|. .+-+.|+..+|+++...+.+.+.. ..
T Consensus 110 ~~~Ipi~HiegG~-------------~s~~~~~~~~de~~R~-----~iskls~~hf~~t~~~~~~L~~~G--~~----- 164 (377)
T d1o6ca_ 110 YHQIAVGHVEAGL-------------RTGNKYSPFPEELNRQ-----MTGAIADLHFAPTGQAKDNLLKEN--KK----- 164 (377)
T ss_dssp HTTCEEEEESCCC-------------CCSCTTTTTTHHHHHH-----HHHHHCSEEEESSHHHHHHHHHTT--CC-----
T ss_pred HCCCEEEEEECCC-------------CCCCCCCCCCHHHHCC-----CCCCCEEEEEECCHHHHHHHHHHC--CC-----
T ss_conf 1142279995145-------------6543323471455400-----356530488632346663443303--44-----
Q ss_pred HHHHHHHCCCCCCCCCCCCEEEECCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEE
Q ss_conf 99985404743458889968995999-98999644689899831100125765455579983058875320799995899
Q 001705 403 KLRVRRQRGVSCFGRFMPRMVVIPPG-MDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTIL 481 (1024)
Q Consensus 403 ~l~~~~~~g~~~~g~~~~ki~VIPnG-iD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il 481 (1024)
..++.++-+. +|.-....... . ... . ......+..+++
T Consensus 165 ----------------~~~I~~vG~~~~D~i~~~~~~~-----~---------------~~~----~-~~~~~~~~~ilv 203 (377)
T d1o6ca_ 165 ----------------ADSIFVTGNTAIDALNTTVRDG-----Y---------------SHP----V-LDQVGEDKMILL 203 (377)
T ss_dssp ----------------GGGEEECCCHHHHHHHHHCCSS-----C---------------CCS----T-TTTTTTSEEEEE
T ss_pred ----------------CCEEEECCCHHHHHHHHHHHHH-----H---------------HHH----H-HHHCCCCCEEEE
T ss_conf ----------------5427523420678888777777-----7---------------533----3-443057844999
Q ss_pred EEECCCCC-CCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHH-HHHHCCCCCCEEECCCCCCCCH
Q ss_conf 98389987-899999999941415579983999991599930001331589999999-9987199997783999998979
Q 001705 482 ALSRPDPK-KNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLK-LIDKYDLYGQVAYPKHHKQSDV 559 (1024)
Q Consensus 482 ~vgRld~~-Kgi~~ll~A~~~l~~l~~~~~l~LIiG~~~~~~~l~~~~~~~~~~i~~-li~~~~l~~~V~~~g~~~~~el 559 (1024)
..-|..-. +.....+.++..+. .......++....+. ..+.. ........+++.+...+++.++
T Consensus 204 t~Hr~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~------------~~~~~~~~~~~~~~~ni~~~~~l~~~~f 269 (377)
T d1o6ca_ 204 TAHRRENLGEPMENMFKAIRRIV--GEFEDVQVVYPVHLN------------PVVREAAHKHFGDSDRVHLIEPLEVIDF 269 (377)
T ss_dssp CC----------HHHHHHHHHHH--HHCTTEEEEEC----------------CHHHHHHHHC--CCSSEEECCCCCHHHH
T ss_pred EECCCCCCCCCHHHHHHHHHHHC--CCCCCCCCCCCCCCC------------CCCCHHHHHCCCCCCCEEECCCCCHHHH
T ss_conf 83231014663378999987521--233556532345521------------1321122101345651475132136889
Q ss_pred HHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCC-CCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCHHH
Q ss_conf 999997231893999238989888999999984996998188-8721113049858993999999999999999739999
Q 001705 560 PDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKN-GGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNM 638 (1024)
Q Consensus 560 ~~ly~~A~~~~Dv~v~ps~~Egfgl~llEAmA~G~PVIat~~-Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~ 638 (1024)
..+++.| ++++--| |-...||...|+|+|.-.. +.-++-++.+. -+++++ |.+++.+++.+++.++..
T Consensus 270 l~llk~s----~~vIgnS-----ss~i~Ea~~lg~P~Inir~~tERqe~~~~g~-nilv~~-~~~~I~~~i~~~l~~~~~ 338 (377)
T d1o6ca_ 270 HNFAAKS----HFILTDS-----GGVQEEAPSLGKPVLVLRDTTERPEGVEAGT-LKLAGT-DEENIYQLAKQLLTDPDE 338 (377)
T ss_dssp HHHHHHC----SEEEEC-------CHHHHGGGGTCCEEEECSCCC---CTTTTS-SEEECS-CHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHH----HEEECCC-----CHHHHHHHHHHCEEEEECCCCCCCCHHHCCE-EEECCC-CHHHHHHHHHHHHHCHHH
T ss_conf 9998642----2564164-----0467766665414898078875822000680-598789-999999999999749687
Q ss_pred HHHH
Q ss_conf 9999
Q 001705 639 WSEC 642 (1024)
Q Consensus 639 ~~~~ 642 (1024)
+..+
T Consensus 339 ~~~~ 342 (377)
T d1o6ca_ 339 YKKM 342 (377)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 7630
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.58 E-value=1.3e-08 Score=71.47 Aligned_cols=78 Identities=15% Similarity=0.136 Sum_probs=69.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCCCC
Q ss_conf 89994099998999999999939997878999089999996876227993699448878990878630013887774578
Q 001705 918 RLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPP 997 (1024)
Q Consensus 918 ~leV~P~~vSKg~ALr~L~~~~gi~~~~vvvfiGDs~N~D~~~Ml~~~~~~vamg~~~~Na~~~l~~~a~~~~~~~v~~~ 997 (1024)
..+..+.+.+|..++..++.+++++++++++| ||+.| | ++|++.+|.+|||. |.+.++..|+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i-GDs~n-D-i~m~~~ag~~va~n-----a~~~lk~~Ad---------- 194 (210)
T d1j97a_ 133 VEGEVLKENAKGEILEKIAKIEGINLEDTVAV-GDGAN-D-ISMFKKAGLKIAFC-----AKPILKEKAD---------- 194 (210)
T ss_dssp EECSSCSTTHHHHHHHHHHHHHTCCGGGEEEE-ESSGG-G-HHHHHHCSEEEEES-----CCHHHHTTCS----------
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEE-CCCCC-H-HHHHHHCCCCEEEC-----CCHHHHHHCC----------
T ss_conf 33211112345410335788846665541786-37847-4-99999889878999-----8999997499----------
Q ss_pred CCCCEEEECCCCCHHHHHHHHH
Q ss_conf 9999268225568257999988
Q 001705 998 DSPNIAYIEESYEPQDLSAALK 1019 (1024)
Q Consensus 998 ~~~~~~~~~~~~~~~gi~~al~ 1019 (1024)
++++..+.+||..+||
T Consensus 195 ------~vi~~~d~~~vl~~lk 210 (210)
T d1j97a_ 195 ------ICIEKRDLREILKYIK 210 (210)
T ss_dssp ------EEECSSCGGGGGGGCC
T ss_pred ------EEECCCCHHHHHHHHC
T ss_conf ------9991799999999869
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=98.50 E-value=1.3e-07 Score=64.80 Aligned_cols=193 Identities=9% Similarity=0.111 Sum_probs=89.8
Q ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEC---CCCHHHHHHHHH-HCCCCCCCCCEEEECCCCEEEC
Q ss_conf 998468999999321599999999997300399983999987---999889999998-5399988988899658855882
Q 001705 752 IAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVT---GSSLGETMEAIR-RCTVNIEDFDAIVCNSGSELYF 827 (1024)
Q Consensus 752 ia~D~DgTl~~~~~~~~~~~~~~l~~l~~~~~~~gi~vviaT---GR~~~~~~~~l~-~~~i~~~~~d~lI~~nGa~i~~ 827 (1024)
+.+|+||||.+.+..+ +.+.++++.+++. |+.|+++| +|+...+.+.|. .+++... .+.++++..+...+
T Consensus 5 v~fDlDGTL~~~~~~i-~~a~~~i~~l~~~----g~~~~~~Tn~s~~~~~~~~~~L~~~~~~~~~-~~~i~~~~~~~~~~ 78 (253)
T d1yv9a1 5 YLIDLDGTIYLGKEPI-PAGKRFVERLQEK----DLPFLFVTNNTTKSPETVAQRLANEFDIHVP-ASLVYTATLATIDY 78 (253)
T ss_dssp EEECCBTTTEETTEEC-HHHHHHHHHHHHT----TCCEEEEECCCSSCHHHHHHHHHHHSCCCCC-GGGEEEHHHHHHHH
T ss_pred EEECCCCCCEECCCCC-CCHHHHHHHHHHC----CCCEEEEECCCCCCHHHHHHHHHHHCCCCCC-CCCCCCHHHHHHHH
T ss_conf 9990888008299758-0199999999977----9978998089999989999888986077655-35246789999999
Q ss_pred CCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCE
Q ss_conf 79865457100121202478322888876532004898865324568899417999905997525599999999851891
Q 001705 828 PWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFR 907 (1024)
Q Consensus 828 ~~~~~~~d~~~~~~i~~~w~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~L~~~~~~ 907 (1024)
. .+..... ..+............... .........+.+.-. ......... +...+.... .
T Consensus 79 l-----~~~~~~~-~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~-~ 138 (253)
T d1yv9a1 79 M-----KEANRGK-KVFVIGEAGLIDLILEAG----------FEWDETNPDYVVVGL-DTELSYEKV--VLATLAIQK-G 138 (253)
T ss_dssp H-----HHHCCCS-EEEEESCHHHHHHHHHTT----------CEECSSSCSEEEECC-CTTCCHHHH--HHHHHHHHT-T
T ss_pred H-----HHCCCCC-EEEECCCCHHHHHHHHHC----------CCCCCCCCCEEEEEC-CCCCCHHHH--HHHHHHHCC-C
T ss_conf 9-----8645787-278616602445666526----------512345763378703-676547776--555554205-6
Q ss_pred EEEEEECCCEE---------------------EEEECCCCCHHHH--HHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCC
Q ss_conf 79999439908---------------------9994099998999--999999939997878999089999996876227
Q 001705 908 CNLVYTRAGSR---------------------LNVVPSFASRIQA--LRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVG 964 (1024)
Q Consensus 908 ~~v~~s~~~~~---------------------leV~P~~vSKg~A--Lr~L~~~~gi~~~~vvvfiGDs~N~D~~~Ml~~ 964 (1024)
..++.+..... +...+...+|..+ ..++++++|+++++++++ ||+.+|| +.|...
T Consensus 139 ~~~i~~n~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~gi~~~~~l~I-GD~~~~D-I~~a~~ 216 (253)
T d1yv9a1 139 ALFIGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMV-GDNYETD-IQSGIQ 216 (253)
T ss_dssp CEEEESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGGGEEEE-ESCTTTH-HHHHHH
T ss_pred CCEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEE-CCCHHHH-HHHHHH
T ss_conf 63032358841122473464056531000122343036513431267878999848884423784-3782779-999998
Q ss_pred CCC-EEEEC
Q ss_conf 993-69944
Q 001705 965 LHK-TLILR 972 (1024)
Q Consensus 965 ~~~-~vamg 972 (1024)
+|. ++.|.
T Consensus 217 aG~~si~V~ 225 (253)
T d1yv9a1 217 NGIDSLLVT 225 (253)
T ss_dssp HTCEEEEET
T ss_pred CCCCEEEEC
T ss_conf 799899989
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=98.46 E-value=4.6e-05 Score=47.83 Aligned_cols=92 Identities=15% Similarity=0.210 Sum_probs=63.8
Q ss_pred CCCEEECCCCCCCCHHHHH--HHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHH----HH-CCCCCEEEE
Q ss_conf 9977839999989799999--9723189399923898988899999998499699818887211----13-049858993
Q 001705 545 YGQVAYPKHHKQSDVPDIY--RLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVD----IL-KALNNGLLV 617 (1024)
Q Consensus 545 ~~~V~~~g~~~~~el~~ly--~~A~~~~Dv~v~ps~~Egfgl~llEAmA~G~PVIat~~Gg~~e----ii-~~~~~Gllv 617 (1024)
..++.+..++++. .++ ..+ ++||. -|-..++.||+.+|+|+|+....+=.. .+ +....|+.+
T Consensus 318 ~~nv~~~~~~pq~---~lL~hp~~----~~fIt----HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l 386 (450)
T d2c1xa1 318 RGYGMVVPWAPQA---EVLAHEAV----GAFVT----HCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRI 386 (450)
T ss_dssp TTTEEEESCCCHH---HHHTSTTE----EEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC
T ss_pred CCCCCCCCCCCHH---HHHCCCCE----EEEEC----CCCCCHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCEEEE
T ss_conf 3540155467837---66526741----69970----6883079999985999896354000089999999970908980
Q ss_pred CCC--CHHHHHHHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 999--9999999999997399999999999999
Q 001705 618 DPH--DQNAIADALLKLLADKNMWSECRKNGLK 648 (1024)
Q Consensus 618 ~p~--d~~~la~aI~~ll~d~~~~~~~~~~a~~ 648 (1024)
+.. +.+++.++|.++|+|+. .++.++++.+
T Consensus 387 ~~~~~t~~~l~~ai~~vL~d~~-y~~~~~r~~~ 418 (450)
T d2c1xa1 387 EGGVFTKSGLMSCFDQILSQEK-GKKLRENLRA 418 (450)
T ss_dssp GGGSCCHHHHHHHHHHHHHSHH-HHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHCCCH-HHHHHHHHHH
T ss_conf 3898389999999999961947-9999999999
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=98.46 E-value=7.5e-07 Score=59.72 Aligned_cols=204 Identities=10% Similarity=0.055 Sum_probs=101.2
Q ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEC---CCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEC
Q ss_conf 9998468999999321599999999997300399983999987---9998899999985399988988899658855882
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVT---GSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYF 827 (1024)
Q Consensus 751 via~D~DgTl~~~~~~~~~~~~~~l~~l~~~~~~~gi~vviaT---GR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~i~~ 827 (1024)
.+.+|+||||.+....+ +...++++.+++. |+.|+++| +|+...+...+..+|+++ .++-++++......+
T Consensus 9 ~vlFDlDGTL~~~~~~i-~~a~e~l~~l~~~----g~~~~~~TN~~~~~~~~~~~~~~~~g~~~-~~~~v~ts~~~~~~~ 82 (261)
T d1vjra_ 9 LFILDMDGTFYLDDSLL-PGSLEFLETLKEK----NKRFVFFTNNSSLGAQDYVRKLRNMGVDV-PDDAVVTSGEITAEH 82 (261)
T ss_dssp EEEECCBTTTEETTEEC-TTHHHHHHHHHHT----TCEEEEEESCTTSCHHHHHHHHHHTTCCC-CGGGEEEHHHHHHHH
T ss_pred EEEEECCCEEEECCCCC-CHHHHHHHHHHHC----CCCEEEEECCCCCCHHHHHHHHHHHCCCC-CCCEECCHHHHHHHH
T ss_conf 99995988568799168-3199999999976----99889995899999899999998523566-501034589999999
Q ss_pred CCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCE
Q ss_conf 79865457100121202478322888876532004898865324568899417999905997525599999999851891
Q 001705 828 PWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFR 907 (1024)
Q Consensus 828 ~~~~~~~d~~~~~~i~~~w~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~L~~~~~~ 907 (1024)
....... ...+......++..+..+... ... ....+.+ ................ .+...+
T Consensus 83 -----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--------~~~--~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~-- 142 (261)
T d1vjra_ 83 -----MLKRFGR-CRIFLLGTPQLKKVFEAYGHV--------IDE--ENPDFVV-LGFDKTLTYERLKKAC-ILLRKG-- 142 (261)
T ss_dssp -----HHHHHCS-CEEEEESCHHHHHHHHHTTCE--------ECS--SSCSEEE-ECCCTTCCHHHHHHHH-HHHTTT--
T ss_pred -----HHHHCCC-CEEEEECCCCHHHHHHHCCCC--------CCH--HHCCEEE-ECCCCCCCHHHHHHHH-HHHHCC--
T ss_conf -----9986379-638983564305788861950--------250--1012057-4577653468899998-875037--
Q ss_pred EEEEEECCCEEE------------------------EEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHC
Q ss_conf 799994399089------------------------99409999899999999993999787899908999999687622
Q 001705 908 CNLVYTRAGSRL------------------------NVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLV 963 (1024)
Q Consensus 908 ~~v~~s~~~~~l------------------------eV~P~~vSKg~ALr~L~~~~gi~~~~vvvfiGDs~N~D~~~Ml~ 963 (1024)
..++........ +....+-........+++++|++.++++++ ||+.+|| +.|-+
T Consensus 143 ~~~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~lmV-GD~~~~D-I~ga~ 220 (261)
T d1vjra_ 143 KFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAMV-GDRLYTD-VKLGK 220 (261)
T ss_dssp CEEEESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGGGEEEE-ESCHHHH-HHHHH
T ss_pred CCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCEE-CCCHHHH-HHHHH
T ss_conf 401224677545578871414520667776531321213667995788888876640472211031-6871678-99999
Q ss_pred CCCC-EEEECCCCCCCHHHHH
Q ss_conf 7993-6994488789908786
Q 001705 964 GLHK-TLILRGSVMYGSEKLL 983 (1024)
Q Consensus 964 ~~~~-~vamg~~~~Na~~~l~ 983 (1024)
.+|. +|.|.... +..+++.
T Consensus 221 ~aG~~si~V~~G~-~~~~~~~ 240 (261)
T d1vjra_ 221 NAGIVSILVLTGE-TTPEDLE 240 (261)
T ss_dssp HHTCEEEEESSSS-CCHHHHH
T ss_pred HCCCCEEEECCCC-CCHHHHH
T ss_conf 8799699989899-9877886
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.42 E-value=5.8e-05 Score=47.17 Aligned_cols=360 Identities=12% Similarity=0.073 Sum_probs=183.0
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCC-CCCCCCCCCCC
Q ss_conf 18999931454345777779989888078999999999980799138999816778998776669875-33579999999
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPN-EMLSCPSDGTG 248 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~-e~l~~~~~~~~ 248 (1024)
|||++|+-. . ..---+..|.++|.+.++ .++.++....+.. +.... ..+
T Consensus 1 MKi~~v~Gt------R----------~e~~kl~pli~~l~~~~~-~~~~li~tG~H~~-----~~~~~~~~~-------- 50 (376)
T d1f6da_ 1 MKVLTVFGT------R----------PEAIKMAPLVHALAKDPF-FEAKVCVTAQHRE-----MLDQVLKLF-------- 50 (376)
T ss_dssp CEEEEEECS------H----------HHHHHHHHHHHHHHHCTT-CEEEEEECCTTGG-----GGHHHHHHT--------
T ss_pred CEEEEEEEH------H----------HHHHHHHHHHHHHHHCCC-CCEEEEECCCCHH-----HHHHHHHHC--------
T ss_conf 969999982------6----------739999999999973899-8779999088989-----999999862--------
Q ss_pred CCCEE-EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC-CHHHHHHHHHCCC
Q ss_conf 78809-998048998776443467731489999999999999999875414999996349997698-7479999998029
Q 001705 249 SCGAY-IIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYA-DAGEVAAHLSGAL 326 (1024)
Q Consensus 249 ~~gv~-i~rip~~~~~~~~~k~~lw~~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~-~~~~~a~~l~~~~ 326 (1024)
+.. .+.+..... . ..+.. .....+..+.+.+.+ .+||+|.++.- ...+.++..+..+
T Consensus 51 --~~~~~~~~~~~~~-----~----~~~~~---~~~~~i~~~~~~~~~-------~kPD~v~v~GDr~e~la~a~aa~~~ 109 (376)
T d1f6da_ 51 --SIVPDYDLNIMQP-----G----QGLTE---ITCRILEGLKPILAE-------FKPDVVLVHGDTTTTLATSLAAFYQ 109 (376)
T ss_dssp --TCCCSEECCCCSS-----S----SCHHH---HHHHHHHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHHHTT
T ss_pred --CCCCCCCCCCCCC-----C----CCHHH---HHHHHHHHHHHHHHH-------CCCCCEEEECCCCCHHHHHHHHHHH
T ss_conf --8787744004889-----9----98999---999999864788974-------5676224310344313689998740
Q ss_pred CCCEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 99799995799600369987319997003368999998999997311179899279899999970026862678999998
Q 001705 327 NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRV 406 (1024)
Q Consensus 327 ~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~~~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~l~~~f~~~~~~~l~~ 406 (1024)
++|+++..-+.-. .+.....+.. ..| ..+-+-|+..+|+++...+.+.+.. ..+
T Consensus 110 ~ipi~HiegG~~s--------~~~~~~~pde---~~R-----~~iskls~~hf~~~~~~~~~L~~~G--~~~-------- 163 (376)
T d1f6da_ 110 RIPVGHVEAGLRT--------GDLYSPWPEE---ANR-----TLTGHLAMYHFSPTETSRQNLLREN--VAD-------- 163 (376)
T ss_dssp TCCEEEESCCCCC--------SCTTSSTTHH---HHH-----HHHHHTCSEEEESSHHHHHHHHHTT--CCG--------
T ss_pred CCEEEEEECCCCC--------CCCCCCCCHH---HHH-----HHHCCCEEEEEECCHHHHHHHHHCC--CCC--------
T ss_conf 7538998524465--------4200047406---655-----4203200488743478886877518--986--------
Q ss_pred HHHCCCCCCCCCCCCEEEECC-CCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCC-HHHHH-HHHCCCCCCEE-E
Q ss_conf 540474345888996899599-99899964-46898998311001257654555799830-58875-32079999589-9
Q 001705 407 RRQRGVSCFGRFMPRMVVIPP-GMDFSYVT-TQDTMGGDTDLKSLIGNDRTQSKRNLPPM-WSEVM-RFFTNPHKPTI-L 481 (1024)
Q Consensus 407 ~~~~g~~~~g~~~~ki~VIPn-GiD~~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~-~~~~~~~~~~I-l 481 (1024)
.++.++-+ ++|.-... +... ..+.. ..... ......+++++ +
T Consensus 164 -------------~~I~~vG~~~~D~l~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~ilv 210 (376)
T d1f6da_ 164 -------------SRIFITGNTVIDALLWVRDQVM--------------------SSDKLRSELAANYPFIDPDKKMILV 210 (376)
T ss_dssp -------------GGEEECCCHHHHHHHHHHHHTT--------------------TCHHHHHHHHTTCTTCCTTSEEEEE
T ss_pred -------------CCCCEECCCHHHHHHHHHHHHH--------------------CCCHHHHHHHCCCCCCCCCCCEEEE
T ss_conf -------------5341216724878888776542--------------------3512321111022334777766998
Q ss_pred EEECCC-CCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHH
Q ss_conf 983899-8789999999994141557998399999159993000133158999999999871999977839999989799
Q 001705 482 ALSRPD-PKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVP 560 (1024)
Q Consensus 482 ~vgRld-~~Kgi~~ll~A~~~l~~l~~~~~l~LIiG~~~~~~~l~~~~~~~~~~i~~li~~~~l~~~V~~~g~~~~~el~ 560 (1024)
..-|.. ..+++..++.++..+.. ...++.++.-..+. ......+. .......++.+...+++.++.
T Consensus 211 t~H~~~~~~~~~~~i~~~l~~~~~--~~~~~~ii~p~~~~--------~~~~~~~~---~~~~~~~ni~~~~~l~~~~fl 277 (376)
T d1f6da_ 211 TGHRRESFGRGFEEICHALADIAT--THQDIQIVYPVHLN--------PNVREPVN---RILGHVKNVILIDPQEYLPFV 277 (376)
T ss_dssp CCCCBSSCCHHHHHHHHHHHHHHH--HCTTEEEEEECCBC--------HHHHHHHH---HHHTTCTTEEEECCCCHHHHH
T ss_pred ECCCCHHHHHHHHHHHHHHHHHHH--HCCEEEEECCCCCC--------HHHHHHHH---HHHCCCCCCEEECCCCHHHHH
T ss_conf 335411112009999999865434--21404785254432--------12444676---664044451332355678999
Q ss_pred HHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCC-CCHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCHHHH
Q ss_conf 999972318939992389898889999999849969981888-7211130498589939999999999999997399999
Q 001705 561 DIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNG-GPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMW 639 (1024)
Q Consensus 561 ~ly~~A~~~~Dv~v~ps~~Egfgl~llEAmA~G~PVIat~~G-g~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~ 639 (1024)
.+++.| .+++.-| |-...||...|+|+|.-..+ .-++-+..+ +-+++++ |.+++.+++.+++.++...
T Consensus 278 ~ll~~a----~~vignS-----ssgi~Ea~~lg~P~Inir~~ter~~~~~~g-~~i~v~~-~~~~I~~ai~~~l~~~~~~ 346 (376)
T d1f6da_ 278 WLMNHA----WLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVGT-DKQRIVEEVTRLLKDENEY 346 (376)
T ss_dssp HHHHHC----SEEEESS-----SGGGGTGGGGTCCEEECSSCCSCHHHHHHT-SEEECCS-SHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHC----EEEEECC-----CCHHHHHHHHCCCEEECCCCCCCCCCEECC-EEEECCC-CHHHHHHHHHHHHHCHHHH
T ss_conf 998416----3998368-----506766787489889727876576412368-0698789-9999999999997285766
Q ss_pred HHHHHHHHHHH-HCCCHHHHHHHHHHHHHH
Q ss_conf 99999999999-609999999999999998
Q 001705 640 SECRKNGLKNI-HRFSWPEHCRNYLSHVEH 668 (1024)
Q Consensus 640 ~~~~~~a~~~~-~~fsw~~~a~~~l~~l~~ 668 (1024)
..+ ... .-|---..+++..+.+..
T Consensus 347 ~~~-----~~~~npYGdG~as~rI~~iLk~ 371 (376)
T d1f6da_ 347 QAM-----SRAHNPYGDGQACSRILEALKN 371 (376)
T ss_dssp HHH-----HHSCCTTCCSCHHHHHHHHHHH
T ss_pred HHH-----CCCCCCCCCCHHHHHHHHHHHH
T ss_conf 530-----4578989898499999999985
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=98.38 E-value=1.7e-06 Score=57.39 Aligned_cols=193 Identities=7% Similarity=-0.045 Sum_probs=94.5
Q ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEC---CCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEC
Q ss_conf 9998468999999321599999999997300399983999987---9998899999985399988988899658855882
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVT---GSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYF 827 (1024)
Q Consensus 751 via~D~DgTl~~~~~~~~~~~~~~l~~l~~~~~~~gi~vviaT---GR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~i~~ 827 (1024)
.|.+|+||||.+.+..+ +.+.++++.+++. |+.++++| +|+..++.+.+..+|+++. .+-++++......+
T Consensus 5 ~VifDlDGTL~~~~~~i-~~a~e~i~~l~~~----g~~~~~~TN~~~~~~~~~~~~l~~~G~~~~-~~~i~~~~~~~~~~ 78 (250)
T d2c4na1 5 NVICDIDGVLMHDNVAV-PGAAEFLHGIMDK----GLPLVLLTNYPSQTGQDLANRFATAGVDVP-DSVFYTSAMATADF 78 (250)
T ss_dssp EEEEECBTTTEETTEEC-TTHHHHHHHHHHT----TCCEEEEESCCSCCHHHHHHHHHHTTCCCC-GGGEEEHHHHHHHH
T ss_pred EEEEECCCEEEECCCCC-CCHHHHHHHHHHC----CCCEEEEECCCCCCHHHHHHHHHHCCCCCC-CEEEECHHHHHHHH
T ss_conf 99997998018799858-2099999999977----995899928999999999888763035665-41673049999999
Q ss_pred CCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCE
Q ss_conf 79865457100121202478322888876532004898865324568899417999905997525599999999851891
Q 001705 828 PWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFR 907 (1024)
Q Consensus 828 ~~~~~~~d~~~~~~i~~~w~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~L~~~~~~ 907 (1024)
. ....... .+....+.+...+...... .. .....+.+.-. ...............+.. .
T Consensus 79 l--~~~~~~~-----~~~~~~~~~~~~~~~~~~~--------~~--~~~~~~~v~~~-~~~~~~~~~~~~~~~~~~--~- 137 (250)
T d2c4na1 79 L--RRQEGKK-----AYVVGEGALIHELYKAGFT--------IT--DVNPDFVIVGE-TRSYNWDMMHKAAYFVAN--G- 137 (250)
T ss_dssp H--HTSSCCE-----EEEECCTHHHHHHHHTTCE--------EC--SSSCSEEEECC-CTTCCHHHHHHHHHHHHT--T-
T ss_pred H--HHHHCCC-----CCCCCCHHHHHHHHHHHHH--------CC--CCCCCEEECCC-CCCCCHHHHHHHHHHHHC--C-
T ss_conf 9--8630553-----1035877889999974431--------00--23552011267-755425788999998742--6-
Q ss_pred EEEEEECCCE--------------------EEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCC
Q ss_conf 7999943990--------------------89994099998999999999939997878999089999996876227993
Q 001705 908 CNLVYTRAGS--------------------RLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHK 967 (1024)
Q Consensus 908 ~~v~~s~~~~--------------------~leV~P~~vSKg~ALr~L~~~~gi~~~~vvvfiGDs~N~D~~~Ml~~~~~ 967 (1024)
...+.+.... ..+....+--....++++++++|+++++++++ ||+.+|| +.|-+.+|.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~lgi~p~e~v~I-GD~~~~D-I~~a~~aG~ 215 (250)
T d2c4na1 138 ARFIATNPDTHGRGFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIV-GDNLRTD-ILAGFQAGL 215 (250)
T ss_dssp CEEEESCCCSBSSTTCBCHHHHHHHHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEE-ESCTTTH-HHHHHHTTC
T ss_pred CCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHCCCCHHEEEE-CCCHHHH-HHHHHHCCC
T ss_conf 52101354323575543476257899875021000013420466766666632780345784-6872779-999998799
Q ss_pred -EEEEC
Q ss_conf -69944
Q 001705 968 -TLILR 972 (1024)
Q Consensus 968 -~vamg 972 (1024)
+|.|.
T Consensus 216 ~tilV~ 221 (250)
T d2c4na1 216 ETILVL 221 (250)
T ss_dssp EEEEES
T ss_pred CEEEEC
T ss_conf 899989
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.31 E-value=0.0001 Score=45.54 Aligned_cols=93 Identities=14% Similarity=0.142 Sum_probs=63.9
Q ss_pred CCCCEEECCCCCCCCHHHHHH--HHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCC-C---HHHH-CCCCCEEE
Q ss_conf 999778399999897999999--723189399923898988899999998499699818887-2---1113-04985899
Q 001705 544 LYGQVAYPKHHKQSDVPDIYR--LAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG-P---VDIL-KALNNGLL 616 (1024)
Q Consensus 544 l~~~V~~~g~~~~~el~~ly~--~A~~~~Dv~v~ps~~Egfgl~llEAmA~G~PVIat~~Gg-~---~eii-~~~~~Gll 616 (1024)
..++|.+.+++|+.+ ++. .+ ++||. -|-..++.||+.+|+|+|+...-+ - ...+ +....|+.
T Consensus 332 ~~~nv~~~~w~Pq~~---lL~hp~~----~~fVt----HGG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~ 400 (471)
T d2vcha1 332 KKRGFVIPFWAPQAQ---VLAHPST----GGFLT----HCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALR 400 (471)
T ss_dssp TTTEEEEESCCCHHH---HHHSTTE----EEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEEC
T ss_pred CCCCEEECCCCCHHH---HHCCCCC----CEEEE----CCCCCHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHEEEEE
T ss_conf 678755216578999---8657657----88970----688428999998599989714401228899999997204899
Q ss_pred ECCC-----CHHHHHHHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 3999-----9999999999997399999999999999
Q 001705 617 VDPH-----DQNAIADALLKLLADKNMWSECRKNGLK 648 (1024)
Q Consensus 617 v~p~-----d~~~la~aI~~ll~d~~~~~~~~~~a~~ 648 (1024)
+... +.+++++||.+++++++ -+.+++++++
T Consensus 401 l~~~~~~~~t~~~l~~ai~~vl~~~~-~~~~r~ra~~ 436 (471)
T d2vcha1 401 PRAGDDGLVRREEVARVVKGLMEGEE-GKGVRNKMKE 436 (471)
T ss_dssp CCCCTTSCCCHHHHHHHHHHHHTSTH-HHHHHHHHHH
T ss_pred EECCCCCCCCHHHHHHHHHHHHCCCH-HHHHHHHHHH
T ss_conf 72487886979999999999967947-8999999999
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.25 E-value=1.4e-07 Score=64.63 Aligned_cols=76 Identities=4% Similarity=-0.084 Sum_probs=56.8
Q ss_pred CCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCE
Q ss_conf 09999899999999993999787899908999999687622799369944887899087863001388777457899992
Q 001705 923 PSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNI 1002 (1024)
Q Consensus 923 P~~vSKg~ALr~L~~~~gi~~~~vvvfiGDs~N~D~~~Ml~~~~~~vamg~~~~Na~~~l~~~a~~~~~~~v~~~~~~~~ 1002 (1024)
....+|+..++.++++++++.++++++ ||+.| | +.|++.++.+++++ +..+.+.+....
T Consensus 141 ~~~~~k~~~~~~~~~~~~~~~~~~i~i-GDs~~-D-l~~a~~A~~~~a~~----~~~~~~~~~~~~-------------- 199 (226)
T d2feaa1 141 TCSNQCGCCKPSVIHELSEPNQYIIMI-GDSVT-D-VEAAKLSDLCFARD----YLLNECREQNLN-------------- 199 (226)
T ss_dssp TCCSCCSSCHHHHHHHHCCTTCEEEEE-ECCGG-G-HHHHHTCSEEEECH----HHHHHHHHTTCC--------------
T ss_pred CCCCCCHHHHHHHHHHHCCCCCEEEEE-ECCHH-H-HHHHHHCCEEEEEC----CHHHHHHHCCCC--------------
T ss_conf 255678999999999846788638998-07631-3-99999889978706----467999982998--------------
Q ss_pred EEECCCCCHHHHHHHHHHC
Q ss_conf 6822556825799998860
Q 001705 1003 AYIEESYEPQDLSAALKAI 1021 (1024)
Q Consensus 1003 ~~~~~~~~~~gi~~al~~~ 1021 (1024)
++ .--+-++|...|+++
T Consensus 200 -~~-~~~d~~~i~~~l~~~ 216 (226)
T d2feaa1 200 -HL-PYQDFYEIRKEIENV 216 (226)
T ss_dssp -EE-CCSSHHHHHHHHHTS
T ss_pred -EE-ECCCHHHHHHHHHHH
T ss_conf -36-249999999999998
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=98.24 E-value=1.3e-05 Score=51.42 Aligned_cols=193 Identities=11% Similarity=0.087 Sum_probs=95.7
Q ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEC---CCCHHHHHHHHHH-CCCCCCCCCEEEECCCCEEEC
Q ss_conf 998468999999321599999999997300399983999987---9998899999985-399988988899658855882
Q 001705 752 IAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVT---GSSLGETMEAIRR-CTVNIEDFDAIVCNSGSELYF 827 (1024)
Q Consensus 752 ia~D~DgTl~~~~~~~~~~~~~~l~~l~~~~~~~gi~vviaT---GR~~~~~~~~l~~-~~i~~~~~d~lI~~nGa~i~~ 827 (1024)
+.+|+||||.+.+..+ +...++++.+++. |+.|+++| .|+...+.+.+.. .++.. ..+-++.+..+...+
T Consensus 5 vlFDlDGTL~~~~~~i-~~a~e~l~~l~~~----g~~~~~~TN~s~~~~~~~~~~l~~~~~~~~-~~~~i~~~~~~~~~~ 78 (253)
T d1wvia_ 5 YLIDLDGTIYKGKDRI-PAGEDFVKRLQER----QLPYILVTNNTTRTPEMVQEMLATSFNIKT-PLETIYTATLATIDY 78 (253)
T ss_dssp EEEECBTTTEETTEEC-HHHHHHHHHHHHH----TCCEEEEECCCSSCHHHHHHHHHHHHSCCC-CGGGEEEHHHHHHHH
T ss_pred EEECCCCCEEECCCCC-CCHHHHHHHHHHC----CCCEEEEECCCCCCHHHHHHHHHHHCCCCC-CCCCCCCHHHHHHHH
T ss_conf 9992868208899838-1499999999977----997899948998999999999986067654-433346679999999
Q ss_pred CCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCE
Q ss_conf 79865457100121202478322888876532004898865324568899417999905997525599999999851891
Q 001705 828 PWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFR 907 (1024)
Q Consensus 828 ~~~~~~~d~~~~~~i~~~w~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~L~~~~~~ 907 (1024)
. .........+......+...+..... .... ................. +.+...+.....
T Consensus 79 l------~~~~~~~~~~~~~~~~l~~~~~~~~~---------~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~- 138 (253)
T d1wvia_ 79 M------NDMKRGKTAYVIGETGLKKAVAEAGY---------REDS--ENPAYVVVGLDTNLTYE--KLTLATLAIQKG- 138 (253)
T ss_dssp H------HHHCCCSEEEEESCHHHHHHHHHTTC---------EECS--SSCSEEEECCCTTCBHH--HHHHHHHHHHTT-
T ss_pred H------HHHCCCCEEEECCCHHHHHHHHHCCC---------CCCC--CCCCEEEEECCCCCCHH--HHHHHHHHHHHC-
T ss_conf 9------87045851343266678999997297---------5333--44304898547876788--887776666522-
Q ss_pred EEEEEECCCEEE---------------------EEECCCCCH--HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCC
Q ss_conf 799994399089---------------------994099998--999999999939997878999089999996876227
Q 001705 908 CNLVYTRAGSRL---------------------NVVPSFASR--IQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVG 964 (1024)
Q Consensus 908 ~~v~~s~~~~~l---------------------eV~P~~vSK--g~ALr~L~~~~gi~~~~vvvfiGDs~N~D~~~Ml~~ 964 (1024)
..++.++....+ ...+..++| ...+.+.++++|++.++++++ ||+.+|| +.|-..
T Consensus 139 ~~~i~tn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gKP~p~~~~~al~~l~i~~~~~~mI-GDs~~~D-I~gA~~ 216 (253)
T d1wvia_ 139 AVFIGTNPDLNIPTERGLLPGAGAILFLLEKATRVKPIIIGKPEAVIMNKALDRLGVKRHEAIMV-GDNYLTD-ITAGIK 216 (253)
T ss_dssp CEEEESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHHHTSCGGGEEEE-ESCTTTT-HHHHHH
T ss_pred CCCCCCCCCCEEECCCCCCCCCCCCHHCCCCCCCCEEEEECCCCCCCCEEHHHHCCCCCCCEEEE-CCCHHHH-HHHHHH
T ss_conf 55116799963476886304677321012333333047841677420011001103454516998-2780777-999998
Q ss_pred CCC-EEEEC
Q ss_conf 993-69944
Q 001705 965 LHK-TLILR 972 (1024)
Q Consensus 965 ~~~-~vamg 972 (1024)
+|. +|.|.
T Consensus 217 aG~~si~V~ 225 (253)
T d1wvia_ 217 NDIATLLVT 225 (253)
T ss_dssp TTCEEEEES
T ss_pred CCCCEEEEC
T ss_conf 799799989
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.96 E-value=6.1e-05 Score=47.02 Aligned_cols=132 Identities=15% Similarity=0.235 Sum_probs=88.4
Q ss_pred EEEEEEECCCCCCCC-CHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEC
Q ss_conf 699998468999999-3215999999999973003999839999879998899999985399988988899658855882
Q 001705 749 LIVIAADCYDSDGNT-TETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYF 827 (1024)
Q Consensus 749 llvia~D~DgTl~~~-~~~~~~~~~~~l~~l~~~~~~~gi~vviaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~i~~ 827 (1024)
+..+++|.+|++... ...+.+..+++++.|++. |+.+.+.||-+...+..+.+.+|++ .+.+
T Consensus 3 ~~~~~~d~~~~~~~g~~D~lr~~a~~~I~~L~~~----Gi~v~ilTGD~~~~a~~ia~~lgI~-----~v~~-------- 65 (135)
T d2b8ea1 3 VTAVIFDKTGTLTKGKPDTLKESAKPAVQELKRM----GIKVGMITGDNWRSAEAISRELNLD-----LVIA-------- 65 (135)
T ss_dssp CCEEEEECCCCCBCSCCCCBCTTHHHHHHHHHHT----TCEEEEECSSCHHHHHHHHHHHTCS-----EEEC--------
T ss_pred EEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHHHHH-----HHCC--------
T ss_conf 8999998914799736889981199999999985----9979997586335556777654222-----1012--------
Q ss_pred CCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCE
Q ss_conf 79865457100121202478322888876532004898865324568899417999905997525599999999851891
Q 001705 828 PWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFR 907 (1024)
Q Consensus 828 ~~~~~~~d~~~~~~i~~~w~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~L~~~~~~ 907 (1024)
... ++ .+...
T Consensus 66 ---~~~------------------------------------p~--------------------~k~~~----------- 75 (135)
T d2b8ea1 66 ---EVL------------------------------------PH--------------------QKSEE----------- 75 (135)
T ss_dssp ---SCC------------------------------------HH--------------------HHHHH-----------
T ss_pred ---CCC------------------------------------HH--------------------HHHHH-----------
T ss_conf ---110------------------------------------26--------------------79999-----------
Q ss_pred EEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCCEEEECCCCCCCHHHHHCCCC
Q ss_conf 79999439908999409999899999999993999787899908999999687622799369944887899087863001
Q 001705 908 CNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 908 ~~v~~s~~~~~leV~P~~vSKg~ALr~L~~~~gi~~~~vvvfiGDs~N~D~~~Ml~~~~~~vamg~~~~Na~~~l~~~a~ 987 (1024)
++.+.. + . .++++||+.| | .++|+.++.|++|+ ++++..+.+||
T Consensus 76 ------------------------v~~~q~--~---~-~v~~vGDg~n-D-~~aL~~Advgia~~----~~~~~~~~aAD 119 (135)
T d2b8ea1 76 ------------------------VKKLQA--K---E-VVAFVGDGIN-D-APALAQADLGIAVG----SGSDVAVESGD 119 (135)
T ss_dssp ------------------------HHHHTT--T---S-CEEEEECSSS-S-HHHHHHSSEEEEEC----CC--------S
T ss_pred ------------------------HHHHHC--C---C-EEEEEECCCC-C-HHHHHHCCEEEECC----CCCHHHHHHCC
T ss_conf ------------------------999985--9---9-7899967877-5-78897478624537----65878998499
Q ss_pred CCCCCCCCCCCCCCEEEECCCCCHHHHHHHHH
Q ss_conf 38877745789999268225568257999988
Q 001705 988 AFKREDVVPPDSPNIAYIEESYEPQDLSAALK 1019 (1024)
Q Consensus 988 ~~~~~~v~~~~~~~~~~~~~~~~~~gi~~al~ 1019 (1024)
.+-....-..|..++|
T Consensus 120 ----------------ivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 120 ----------------IVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp ----------------EEESSCCTHHHHHHHC
T ss_pred ----------------EEEECCCHHHHHHHHC
T ss_conf ----------------9997899889999859
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.77 E-value=0.00031 Score=42.31 Aligned_cols=163 Identities=16% Similarity=0.212 Sum_probs=103.0
Q ss_pred EEEEECCCC-CCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEECCC
Q ss_conf 999846899-9999321599999999997300399983999987999889999998539998898889965885588279
Q 001705 751 VIAADCYDS-DGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPW 829 (1024)
Q Consensus 751 via~D~DgT-l~~~~~~~~~~~~~~l~~l~~~~~~~gi~vviaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~i~~~~ 829 (1024)
++++|.+|| ..+--..+.+.+.++++.+++. |+.+.+.||=+...+..+.+++|+.. .+ .+++.
T Consensus 4 ~~~~d~~~~~~~~~~Dp~R~~~~~~I~~l~~~----GI~v~miTGD~~~tA~~ia~~~Gi~~--~~-------~~v~~-- 68 (168)
T d1wpga2 4 VICSDKTGTLTTNQLDPPRKEVMGSIQLCRDA----GIRVIMITGDNKGTAIAICRRIGIFG--EN-------EEVAD-- 68 (168)
T ss_dssp EEEECCTTTTBCCCECCBCTTHHHHHHHHHHT----TCEEEEECSSCHHHHHHHHHHTTSSC--TT-------CCCTT--
T ss_pred EEEECCCCEEEEEECCCCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHCCCCC--CC-------CCCCC--
T ss_conf 99978851788873488965399999999988----49899989999799999999849988--76-------41110--
Q ss_pred CCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCEEE
Q ss_conf 86545710012120247832288887653200489886532456889941799990599752559999999985189179
Q 001705 830 RDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCN 909 (1024)
Q Consensus 830 ~~~~~d~~~~~~i~~~w~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~L~~~~~~~~ 909 (1024)
... ....+. . ....++.+.+... .
T Consensus 69 ------~~~--------~~~~~~-------~-------------------------------~~~~~~~~~~~~~----~ 92 (168)
T d1wpga2 69 ------RAY--------TGREFD-------D-------------------------------LPLAEQREACRRA----C 92 (168)
T ss_dssp ------TEE--------EHHHHH-------H-------------------------------SCHHHHHHHHHHC----C
T ss_pred ------CCC--------CCCCCC-------H-------------------------------HHHHHHHHHHHHH----H
T ss_conf ------003--------463000-------0-------------------------------1278876655322----3
Q ss_pred EEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCCEEEECCCCCCCHHHHHCCCCCC
Q ss_conf 99943990899940999989999999999399978789990899999968762279936994488789908786300138
Q 001705 910 LVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAF 989 (1024)
Q Consensus 910 v~~s~~~~~leV~P~~vSKg~ALr~L~~~~gi~~~~vvvfiGDs~N~D~~~Ml~~~~~~vamg~~~~Na~~~l~~~a~~~ 989 (1024)
+ +-.+.|. .|..-++.|.. .|. +++++||+.| | ..+|+.++.||+|+ ++++..+.++|
T Consensus 93 -v------~ar~~p~--~K~~lv~~l~~-~g~----~Va~vGDG~n-D-~~AL~~AdvGIa~~----~gt~~a~~aAd-- 150 (168)
T d1wpga2 93 -C------FARVEPS--HKSKIVEYLQS-YDE----ITAMTGDGVN-D-APALKKAEIGIAMG----SGTAVAKTASE-- 150 (168)
T ss_dssp -E------EESCCHH--HHHHHHHHHHH-TTC----CEEEEECSGG-G-HHHHHHSSEEEEET----TSCHHHHHTCS--
T ss_pred -H------HHCCCHH--HHHHHHHHHHH-CCC----CEEEEECCCC-C-HHHHHHCCEEEEEC----CCCHHHHHHCC--
T ss_conf -0------0000114--78889999874-045----4047706778-8-89998598888865----51199998489--
Q ss_pred CCCCCCCCCCCCEEEECCCCCHHHHHHHHHH
Q ss_conf 8777457899992682255682579999886
Q 001705 990 KREDVVPPDSPNIAYIEESYEPQDLSAALKA 1020 (1024)
Q Consensus 990 ~~~~v~~~~~~~~~~~~~~~~~~gi~~al~~ 1020 (1024)
++-....-..|..+++.
T Consensus 151 --------------ivl~~~~l~~v~~~I~~ 167 (168)
T d1wpga2 151 --------------MVLADDNFSTIVAAVEE 167 (168)
T ss_dssp --------------EEETTCCTHHHHHHHHH
T ss_pred --------------EEECCCCHHHHHHHHHC
T ss_conf --------------99915998999999974
|
| >d2b5dx1 a.8.3.3 (X:415-528) Alpha-amylase AmyC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: immunoglobulin/albumin-binding domain-like superfamily: Families 57/38 glycoside transferase middle domain family: AmyC C-terminal domain-like domain: Alpha-amylase AmyC species: Thermotoga maritima [TaxId: 2336]
Probab=96.98 E-value=1.4e-05 Score=51.19 Aligned_cols=73 Identities=19% Similarity=0.092 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHHHH---HHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 21113688999864332---2206999999999999971573200001236744435688887554447666653112
Q 001705 83 RLENMCWRIWHLARKKK---QIAWEDAQRLAKRRLEREQGRNDAADDLSELSEGEKEKGDSINASESLKEIPRINSDM 157 (1024)
Q Consensus 83 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (1024)
|.=|..=|=.-||---- -|..+++++||++|+++|..||+.+.++ |..|+.+++.|...|..++.||.||+++
T Consensus 33 R~LnQaaRELLLaqSSDWaFi~~tgT~~eYA~~R~~~Hl~rF~~L~~~--l~~~~id~~~L~~~E~~D~iFp~idyr~ 108 (114)
T d2b5dx1 33 RVLNQMLRELFLAQSSDWAFIMTTRTSVQYAENRTKLHIKRFLNLYDQ--LVSGRIDEEMLRYYEWTDAIFPEINFRV 108 (114)
T ss_dssp HHHHHHHHHHHHTTBGGGTSCCCTTCHHHHHHHHHHHHHHHHHHHHHH--HHTTCCCHHHHHHHHHHSCSCTTCCGGG
T ss_pred HHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH--HHCCCCCHHHHHHHHHHCCCCCCCCHHH
T ss_conf 999999999999983452589748856899998999999999999999--8748989999999998779988767988
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=96.82 E-value=0.0025 Score=36.39 Aligned_cols=62 Identities=11% Similarity=0.118 Sum_probs=49.5
Q ss_pred EEEECCCCCCCC------CHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC---------------HHHHHHHHHHCCCC
Q ss_conf 998468999999------321599999999997300399983999987999---------------88999999853999
Q 001705 752 IAADCYDSDGNT------TETFQATIKNVMKAAGLSLGLGRVGFILVTGSS---------------LGETMEAIRRCTVN 810 (1024)
Q Consensus 752 ia~D~DgTl~~~------~~~~~~~~~~~l~~l~~~~~~~gi~vviaTGR~---------------~~~~~~~l~~~~i~ 810 (1024)
|++|+|||+..+ ...+.+.+.+.++.+.+. |+.++|.|+|. ...+.+||..+|++
T Consensus 4 i~~DiDGTI~~~~~~~y~~~~P~~~~Ie~l~~l~~~----G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI~ 79 (124)
T d1xpja_ 4 LIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQL----GFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQVP 79 (124)
T ss_dssp EEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHT----TCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTCC
T ss_pred EEEECCCCEECCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 999378872889999827368489999999999987----9989999568754557757787888999999999982998
Q ss_pred CCCCCEEEEC
Q ss_conf 8898889965
Q 001705 811 IEDFDAIVCN 820 (1024)
Q Consensus 811 ~~~~d~lI~~ 820 (1024)
+|-+|..
T Consensus 80 ---Yd~Li~g 86 (124)
T d1xpja_ 80 ---YDEILVG 86 (124)
T ss_dssp ---CSEEEEC
T ss_pred ---CEEEEEC
T ss_conf ---2388879
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=96.26 E-value=0.00013 Score=44.85 Aligned_cols=141 Identities=12% Similarity=-0.029 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEECCCCCCCCCCCHHHHHCCCC
Q ss_conf 59999999999730039998399998799988999999853999889888996588558827986545710012120247
Q 001705 767 FQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYEAHVEYRW 846 (1024)
Q Consensus 767 ~~~~~~~~l~~l~~~~~~~gi~vviaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~i~~~~~~~~~d~~~~~~i~~~w 846 (1024)
+.+.+.++++.+++. |+.++++||++...+...++.+|+.. .|+... . .
T Consensus 216 p~~~v~~~l~~lk~a----Gi~v~i~Tg~~~~~a~~il~~lgl~~-~F~~~~--------------i------------~ 264 (380)
T d1qyia_ 216 PVDEVKVLLNDLKGA----GFELGIATGRPYTETVVPFENLGLLP-YFEADF--------------I------------A 264 (380)
T ss_dssp CHHHHHHHHHHHHHT----TCEEEEECSSCHHHHHHHHHHHTCGG-GSCGGG--------------E------------E
T ss_pred CHHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHCCCCC-CCCCCE--------------E------------E
T ss_conf 436399999999987----99599988997999999999819953-478505--------------8------------7
Q ss_pred CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCC
Q ss_conf 83228888765320048988653245688994179999059975255999999998518917999943990899940999
Q 001705 847 PGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFA 926 (1024)
Q Consensus 847 ~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~leV~P~~v 926 (1024)
..+.+....... ....... ++.. .-+...+.. +. +
T Consensus 265 ~~~d~~~~~~~~-----------~~~~~~~---------KP~p-----~~~~~~~~~---------------~~-----~ 299 (380)
T d1qyia_ 265 TASDVLEAENMY-----------PQARPLG---------KPNP-----FSYIAALYG---------------NN-----R 299 (380)
T ss_dssp CHHHHHHHHHHS-----------TTSCCCC---------TTST-----HHHHHHHHC---------------CC-----G
T ss_pred ECCHHHHHHHHC-----------CCCCCCC---------CCCH-----HHHHHHHHH---------------CC-----C
T ss_conf 441333112203-----------3110236---------9986-----999999998---------------08-----8
Q ss_pred CHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCC---CEEEECCCCCCCHHHHH-CCCC
Q ss_conf 9899999999993999787899908999999687622799---36994488789908786-3001
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLH---KTLILRGSVMYGSEKLL-HGED 987 (1024)
Q Consensus 927 SKg~ALr~L~~~~gi~~~~vvvfiGDs~N~D~~~Ml~~~~---~~vamg~~~~Na~~~l~-~~a~ 987 (1024)
+......+...++++.+.++++ ||+.| | ..|.+.++ .+|+||.....+.+++. ..||
T Consensus 300 -~~~~k~~iv~~~~~~~~~~~~v-GD~~~-D-~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD 360 (380)
T d1qyia_ 300 -DKYESYINKQDNIVNKDDVFIV-GDSLA-D-LLSAQKIGATFIGTLTGLKGKDAAGELEAHHAD 360 (380)
T ss_dssp -GGHHHHHHCCTTCSCTTTEEEE-ESSHH-H-HHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCS
T ss_pred -CHHHHHHHHHHHCCCCCEEEEE-CCCHH-H-HHHHHHCCCCEEEEECCCCCCCCHHHHHHCCCC
T ss_conf -7788999999738998869998-89989-9-999998799889994588886437789767999
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=96.08 E-value=0.0042 Score=34.82 Aligned_cols=64 Identities=17% Similarity=0.022 Sum_probs=47.2
Q ss_pred EEEEECCCCCCC---C-CHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHH---HHHHHHHHCCCCCCCCCEEEECC
Q ss_conf 999846899999---9-32159999999999730039998399998799988---99999985399988988899658
Q 001705 751 VIAADCYDSDGN---T-TETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLG---ETMEAIRRCTVNIEDFDAIVCNS 821 (1024)
Q Consensus 751 via~D~DgTl~~---~-~~~~~~~~~~~l~~l~~~~~~~gi~vviaTGR~~~---~~~~~l~~~~i~~~~~d~lI~~n 821 (1024)
-|++|+|||+-. + ..++.+...+.++.+.++ |..++|.|+|+-. ....||...+++ +|.+.-..
T Consensus 2 ti~vDiDGTl~~~~~~~~~kPi~~~Ie~l~~L~~~----G~~IIi~TaR~~~~~~~t~~wL~~~~i~---yd~i~~~~ 72 (122)
T d2obba1 2 TIAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQE----KHRLILWSVREGELLDEAIEWCRARGLE---FYAANKDY 72 (122)
T ss_dssp EEEECCBTTTBCSCTTSCCCBCTTHHHHHHHHHHT----TCEEEECCSCCHHHHHHHHHHHHTTTCC---CSEESSSS
T ss_pred EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEEECCCCCCHHHHHHHHHHCCCC---CEEHHCCC
T ss_conf 89997579708899976366459999999999987----9969999358886538899999981998---34501057
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.54 E-value=0.0074 Score=33.22 Aligned_cols=57 Identities=9% Similarity=0.196 Sum_probs=43.6
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCCEEEECCCCCCCHHHHHCCCC
Q ss_conf 9999899999999993999787899908999999687622799369944887899087863001
Q 001705 924 SFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 924 ~~vSKg~ALr~L~~~~gi~~~~vvvfiGDs~N~D~~~Ml~~~~~~vamg~~~~Na~~~l~~~a~ 987 (1024)
....|+..++.++...+ +++++++ ||+.| | ..|++.++.+|++++. ...+.+++.++
T Consensus 150 ~~~~K~~~v~~~~~~~~--~~~~~~v-GDs~~-D-i~~~~~ag~~va~~~~--~~~~~~~~~ad 206 (217)
T d1nnla_ 150 ESGGKGKVIKLLKEKFH--FKKIIMI-GDGAT-D-MEACPPADAFIGFGGN--VIRQQVKDNAK 206 (217)
T ss_dssp STTHHHHHHHHHHHHHC--CSCEEEE-ESSHH-H-HTTTTTSSEEEEECSS--CCCHHHHHHCS
T ss_pred CCCHHHHHHHHHHHCCC--CCCCEEE-EECHH-H-HHHHHHCCCEEEECCC--HHHHHHHHHCC
T ss_conf 42208999999986348--6663899-71786-5-9989868921997987--77899998689
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=95.35 E-value=0.013 Score=31.54 Aligned_cols=47 Identities=13% Similarity=0.200 Sum_probs=35.5
Q ss_pred CCCEEEEEEEECCCCCCCC------------CHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCH
Q ss_conf 5540699998468999999------------3215999999999973003999839999879998
Q 001705 745 RRQMLIVIAADCYDSDGNT------------TETFQATIKNVMKAAGLSLGLGRVGFILVTGSSL 797 (1024)
Q Consensus 745 ~~~rllvia~D~DgTl~~~------------~~~~~~~~~~~l~~l~~~~~~~gi~vviaTGR~~ 797 (1024)
.+.+.++ +|+||||.+. ...+.+.+.++++.+.+. |..++++|||+-
T Consensus 5 ~kpk~vi--fDiDgTL~~~~~~~~~~~~~~~~~~~~p~v~~~l~~l~~~----G~~Iii~T~R~~ 63 (149)
T d1ltqa1 5 GKPKAVI--FDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALM----GYQIVVVSGRES 63 (149)
T ss_dssp TSCEEEE--EETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHT----TCEEEEEECSCC
T ss_pred CCCCEEE--EECCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEEECCCH
T ss_conf 9996899--9748883827898757733304084487899999999844----480899926857
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=94.98 E-value=0.028 Score=29.36 Aligned_cols=41 Identities=22% Similarity=0.101 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCC-EEEEC
Q ss_conf 999999999939997878999089999996876227993-69944
Q 001705 929 IQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHK-TLILR 972 (1024)
Q Consensus 929 g~ALr~L~~~~gi~~~~vvvfiGDs~N~D~~~Ml~~~~~-~vamg 972 (1024)
...+...+++++++++++++ |||+.+ | +.+=..+|. ++.+.
T Consensus 132 p~ml~~a~~~~~i~~~~~~~-VGD~~~-D-i~aA~~AGi~~i~v~ 173 (209)
T d2o2xa1 132 PGMLVEAGKRLALDLQRSLI-VGDKLA-D-MQAGKRAGLAQGWLV 173 (209)
T ss_dssp CHHHHHHHHHHTCCGGGCEE-EESSHH-H-HHHHHHTTCSEEEEE
T ss_pred CHHHHHHHHHHCCCCCCEEE-ECCCHH-H-HHHHHHCCCCEEEEE
T ss_conf 01566767773899412689-579788-9-999998799489994
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=94.67 E-value=0.094 Score=25.87 Aligned_cols=112 Identities=13% Similarity=0.048 Sum_probs=62.2
Q ss_pred HCCCCCCEEE-EEE-CCCCCCCH--HHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 0799995899-983-89987899--9999999414155799839999915999300013315899999999987199997
Q 001705 472 FTNPHKPTIL-ALS-RPDPKKNV--TTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQ 547 (1024)
Q Consensus 472 ~~~~~~~~Il-~vg-Rld~~Kgi--~~ll~A~~~l~~l~~~~~l~LIiG~~~~~~~l~~~~~~~~~~i~~li~~~~l~~~ 547 (1024)
....+++.|+ ..| ...+.|.+ +...+....+.+ +...+ +++|+..+. +....+...+........
T Consensus 175 ~~~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~--~~~~i-vl~g~~~e~--------~~~~~~~~~~~~~~~~~~ 243 (348)
T d1pswa_ 175 SLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLID--EGYQV-VLFGSAKDH--------EAGNEILAALNTEQQAWC 243 (348)
T ss_dssp TCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHH--TTCEE-EECCCGGGH--------HHHHHHHTTSCHHHHTTE
T ss_pred CCCCCCCEEEECCCCCHHHCCCCCHHHHHHHHHHHHH--CCCCC-CCCCCCCHH--------HHHHHHHHHHHCCCCCCC
T ss_conf 3355787699535532232216446777666777764--48742-224441059--------998888876310146533
Q ss_pred EEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCC
Q ss_conf 78399999897999999723189399923898988899999998499699818887
Q 001705 548 VAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG 603 (1024)
Q Consensus 548 V~~~g~~~~~el~~ly~~A~~~~Dv~v~ps~~Egfgl~llEAmA~G~PVIat~~Gg 603 (1024)
+.+.|..+-.++..++..| +++|.+. +-.+--|.|+|+|+|+-..+.
T Consensus 244 ~~l~g~~sl~el~~li~~a----~l~I~~D-----tg~~HlAaa~g~p~i~lfg~~ 290 (348)
T d1pswa_ 244 RNLAGETQLDQAVILIAAC----KAIVTND-----SGLMHVAAALNRPLVALYGPS 290 (348)
T ss_dssp EECTTTSCHHHHHHHHHTS----SEEEEES-----SHHHHHHHHTTCCEEEEESSS
T ss_pred CCCCCCCCHHHHHHHHHCC----EEEEECC-----CCHHHHHHHCCCCEEEEECCC
T ss_conf 3555774378899987433----0576158-----608899998299989997899
|
| >d1ufaa1 a.8.3.3 (A:413-517) Hypothetical protein TT1467, domain 2 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: immunoglobulin/albumin-binding domain-like superfamily: Families 57/38 glycoside transferase middle domain family: AmyC C-terminal domain-like domain: Hypothetical protein TT1467, domain 2 species: Thermus thermophilus [TaxId: 274]
Probab=94.49 E-value=0.001 Score=38.93 Aligned_cols=50 Identities=14% Similarity=0.052 Sum_probs=41.7
Q ss_pred HCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 206999999999999971573200001236744435688887554447666653112
Q 001705 101 IAWEDAQRLAKRRLEREQGRNDAADDLSELSEGEKEKGDSINASESLKEIPRINSDM 157 (1024)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (1024)
|..+++++||++|+++|..||+.+.++ +.+. .|...|..++.||.||+++
T Consensus 53 ~~tgt~~eYA~~R~~~Hl~rF~~L~~~--~~~~-----~L~~lE~~d~iFP~idyr~ 102 (105)
T d1ufaa1 53 METGQAEAYARERYEEHARAFFHLLKG--ASPE-----ELRALEERDNPFPEADPRL 102 (105)
T ss_dssp HHHCSSHHHHHHHHHHHHHHHHHHHHH--CCHH-----HHHHHHHHSCCCTTCCGGG
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHH--CCHH-----HHHHHHHHCCCCCCCCHHH
T ss_conf 068856899999999999999999987--6799-----9999998579998987244
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=93.31 E-value=0.17 Score=24.17 Aligned_cols=43 Identities=12% Similarity=0.162 Sum_probs=36.2
Q ss_pred CHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCCE-EEEC
Q ss_conf 989999999999399978789990899999968762279936-9944
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKT-LILR 972 (1024)
Q Consensus 927 SKg~ALr~L~~~~gi~~~~vvvfiGDs~N~D~~~Ml~~~~~~-vamg 972 (1024)
.+...+++++.++++++++++++ ||+.+ | +.+-+.+|.. |.+.
T Consensus 138 p~~~~~~~~~~~~~~~p~~~l~V-gD~~~-D-i~~A~~~G~~~i~v~ 181 (204)
T d2go7a1 138 PSPEAATYLLDKYQLNSDNTYYI-GDRTL-D-VEFAQNSGIQSINFL 181 (204)
T ss_dssp TSSHHHHHHHHHHTCCGGGEEEE-ESSHH-H-HHHHHHHTCEEEESS
T ss_pred HHHHHHHHHHHHHCCCCCEEEEE-ECCHH-H-HHHHHHCCCEEEEEC
T ss_conf 25788899999829997518999-47989-9-999998699699984
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=93.02 E-value=0.088 Score=26.06 Aligned_cols=39 Identities=13% Similarity=0.169 Sum_probs=26.7
Q ss_pred HHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCCEEEE
Q ss_conf 999999999399978789990899999968762279936994
Q 001705 930 QALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLIL 971 (1024)
Q Consensus 930 ~ALr~L~~~~gi~~~~vvvfiGDs~N~D~~~Ml~~~~~~vam 971 (1024)
..+.+++.+++++++++++ |||+.. | +.+=..+|...+.
T Consensus 108 ~~~~~~~~~~~id~~~~~~-IGD~~~-D-i~aA~~aG~~~i~ 146 (161)
T d2fpwa1 108 KLVERYLAEQAMDRANSYV-IGDRAT-D-IQLAENMGINGLR 146 (161)
T ss_dssp GGGGGGC----CCGGGCEE-EESSHH-H-HHHHHHHTSEEEE
T ss_pred HHHHHHHHHCCCCHHCEEE-ECCCHH-H-HHHHHHCCCEEEE
T ss_conf 8999998761989404899-899899-9-9999986990999
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=82.80 E-value=0.61 Score=20.47 Aligned_cols=71 Identities=21% Similarity=0.218 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCC--EEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 8999999999939997878999089999996876227993--69944887899087863001388777457899992682
Q 001705 928 RIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHK--TLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYI 1005 (1024)
Q Consensus 928 Kg~ALr~L~~~~gi~~~~vvvfiGDs~N~D~~~Ml~~~~~--~vamg~~~~Na~~~l~~~a~~~~~~~v~~~~~~~~~~~ 1005 (1024)
.-..+...+++|+++++++++ |||+.+ | +.+=..+|. .+.+.+.- ...+.....++ ++
T Consensus 110 ~p~m~~~~~~~~~i~~~~s~m-VGDs~~-D-i~aA~~Ag~~~~~lv~~g~-~~~~~~~~~ad----------------~v 169 (182)
T d2gmwa1 110 HPGMLLSARDYLHIDMAASYM-VGDKLE-D-MQAAVAANVGTKVLVRTGK-PITPEAENAAD----------------WV 169 (182)
T ss_dssp SCHHHHHHHHHHTBCGGGCEE-EESSHH-H-HHHHHHTTCSEEEEESSSS-CCCHHHHHHCS----------------EE
T ss_pred CCCCCCCHHHHCCCCCCCCCC-CCCCHH-H-HHHHHHHCCCCEEEECCCC-CCCCCCCCCCC----------------EE
T ss_conf 432231012211655344512-279899-9-9999982888479989997-77721024798----------------89
Q ss_pred CCCCCHHHHHHHHHH
Q ss_conf 255682579999886
Q 001705 1006 EESYEPQDLSAALKA 1020 (1024)
Q Consensus 1006 ~~~~~~~gi~~al~~ 1020 (1024)
..+. .++...+++
T Consensus 170 ~~~l--~dl~~~ikk 182 (182)
T d2gmwa1 170 LNSL--ADLPQAIKK 182 (182)
T ss_dssp ESCG--GGHHHHHHC
T ss_pred ECCH--HHHHHHHCC
T ss_conf 8999--999999639
|